Query 020011
Match_columns 332
No_of_seqs 237 out of 849
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 10:26:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020011.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020011hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dli_A Methyltransferase; PSI- 99.6 5E-15 1.7E-19 132.9 7.8 99 182-285 42-142 (240)
2 3h2b_A SAM-dependent methyltra 99.5 2.6E-14 8.9E-19 124.4 11.1 133 182-321 42-194 (203)
3 4hg2_A Methyltransferase type 99.5 7.3E-15 2.5E-19 136.4 5.9 94 182-283 40-135 (257)
4 3jwg_A HEN1, methyltransferase 99.5 8.7E-14 3E-18 122.7 12.4 137 182-322 30-210 (219)
5 2p7i_A Hypothetical protein; p 99.5 1.9E-14 6.4E-19 127.3 7.9 96 182-285 43-143 (250)
6 1y8c_A S-adenosylmethionine-de 99.5 1.2E-13 3.9E-18 122.5 12.7 97 182-283 38-142 (246)
7 1kpg_A CFA synthase;, cyclopro 99.5 8.3E-14 2.8E-18 127.9 12.2 105 177-285 60-170 (287)
8 3e8s_A Putative SAM dependent 99.5 9.3E-14 3.2E-18 121.3 11.6 134 182-322 53-227 (227)
9 4gek_A TRNA (CMO5U34)-methyltr 99.5 2.3E-14 7.8E-19 133.1 8.1 102 182-284 71-179 (261)
10 3ofk_A Nodulation protein S; N 99.5 3.5E-14 1.2E-18 124.7 8.8 103 180-285 50-156 (216)
11 3ou2_A SAM-dependent methyltra 99.5 3.2E-14 1.1E-18 124.1 8.4 99 182-284 47-147 (218)
12 3i9f_A Putative type 11 methyl 99.5 1E-13 3.4E-18 117.4 10.9 135 182-329 18-167 (170)
13 3hem_A Cyclopropane-fatty-acyl 99.5 8.6E-14 2.9E-18 129.4 11.0 102 180-284 71-184 (302)
14 3e23_A Uncharacterized protein 99.5 7.7E-14 2.6E-18 122.3 9.9 118 182-305 44-179 (211)
15 4e2x_A TCAB9; kijanose, tetron 99.5 2.9E-14 9.9E-19 138.7 7.9 145 155-305 80-250 (416)
16 3pfg_A N-methyltransferase; N, 99.5 1.3E-13 4.6E-18 125.0 11.6 96 182-282 51-150 (263)
17 2xvm_A Tellurite resistance pr 99.5 1E-13 3.6E-18 119.2 10.2 117 182-306 33-171 (199)
18 3hnr_A Probable methyltransfer 99.5 1.3E-14 4.6E-19 127.5 4.4 97 182-284 46-146 (220)
19 1vl5_A Unknown conserved prote 99.5 4.9E-14 1.7E-18 127.7 8.2 95 181-283 37-140 (260)
20 3ujc_A Phosphoethanolamine N-m 99.5 7.6E-14 2.6E-18 125.3 9.2 102 177-284 51-160 (266)
21 3thr_A Glycine N-methyltransfe 99.5 6.5E-14 2.2E-18 128.7 8.7 100 182-286 58-178 (293)
22 3g5l_A Putative S-adenosylmeth 99.5 2.6E-13 9E-18 122.1 11.0 103 177-286 40-148 (253)
23 3cc8_A Putative methyltransfer 99.5 2E-13 6.9E-18 119.4 9.6 100 180-285 31-132 (230)
24 2fk8_A Methoxy mycolic acid sy 99.4 2.8E-13 9.4E-18 126.6 11.0 102 180-285 89-196 (318)
25 4htf_A S-adenosylmethionine-de 99.4 1.8E-13 6.3E-18 125.7 9.5 98 182-285 69-175 (285)
26 3lcc_A Putative methyl chlorid 99.4 5E-13 1.7E-17 119.2 11.7 119 183-305 68-204 (235)
27 2aot_A HMT, histamine N-methyl 99.4 2.4E-13 8.1E-18 126.2 9.9 99 181-283 52-172 (292)
28 3l8d_A Methyltransferase; stru 99.4 2.3E-13 7.8E-18 121.0 9.2 96 182-283 54-153 (242)
29 3dlc_A Putative S-adenosyl-L-m 99.4 5E-13 1.7E-17 116.1 11.0 95 184-283 46-148 (219)
30 1xtp_A LMAJ004091AAA; SGPP, st 99.4 1.3E-13 4.4E-18 123.5 7.2 123 177-304 89-234 (254)
31 3mti_A RRNA methylase; SAM-dep 99.4 8E-13 2.7E-17 113.5 11.5 137 182-321 23-183 (185)
32 3ccf_A Cyclopropane-fatty-acyl 99.4 2.6E-13 8.8E-18 124.5 8.8 96 181-284 57-155 (279)
33 1pjz_A Thiopurine S-methyltran 99.4 6.9E-14 2.4E-18 123.8 4.8 118 182-304 23-172 (203)
34 1nkv_A Hypothetical protein YJ 99.4 2.2E-13 7.7E-18 122.3 7.9 97 182-284 37-141 (256)
35 1xxl_A YCGJ protein; structura 99.4 3.4E-13 1.1E-17 121.3 8.8 97 181-284 21-125 (239)
36 3jwh_A HEN1; methyltransferase 99.4 2.6E-13 8.9E-18 119.7 7.8 103 182-286 30-144 (217)
37 3dh0_A SAM dependent methyltra 99.4 3E-13 1E-17 118.7 8.2 134 182-322 38-193 (219)
38 2o57_A Putative sarcosine dime 99.4 5.6E-13 1.9E-17 122.9 10.4 97 182-284 83-188 (297)
39 2avn_A Ubiquinone/menaquinone 99.4 4.2E-13 1.4E-17 122.1 9.2 100 181-286 54-155 (260)
40 3ocj_A Putative exported prote 99.4 3.4E-13 1.2E-17 125.9 8.7 140 182-322 119-304 (305)
41 3ege_A Putative methyltransfer 99.4 5.2E-13 1.8E-17 121.8 9.4 97 181-285 34-132 (261)
42 3gu3_A Methyltransferase; alph 99.4 8E-13 2.7E-17 122.2 10.7 97 181-285 22-128 (284)
43 3cgg_A SAM-dependent methyltra 99.4 1.3E-12 4.6E-17 111.1 11.3 117 182-304 47-171 (195)
44 3dtn_A Putative methyltransfer 99.4 6E-13 2E-17 118.2 9.3 100 181-284 44-149 (234)
45 2p35_A Trans-aconitate 2-methy 99.4 5.3E-13 1.8E-17 119.8 8.9 98 180-284 32-133 (259)
46 2yqz_A Hypothetical protein TT 99.4 1.2E-12 4E-17 117.6 10.9 93 182-282 40-140 (263)
47 3kkz_A Uncharacterized protein 99.4 1.1E-12 3.9E-17 119.3 10.9 98 181-284 46-151 (267)
48 3f4k_A Putative methyltransfer 99.4 8.9E-13 3E-17 118.4 10.1 97 182-284 47-151 (257)
49 3sm3_A SAM-dependent methyltra 99.4 5.3E-13 1.8E-17 117.4 8.0 100 182-284 31-142 (235)
50 2gs9_A Hypothetical protein TT 99.4 1.3E-12 4.3E-17 114.3 10.2 95 181-285 36-134 (211)
51 3bxo_A N,N-dimethyltransferase 99.4 3.5E-13 1.2E-17 119.3 6.7 98 182-284 41-142 (239)
52 3ggd_A SAM-dependent methyltra 99.4 3.9E-13 1.3E-17 120.5 6.9 110 170-285 47-165 (245)
53 3bus_A REBM, methyltransferase 99.4 1.1E-12 3.8E-17 119.1 9.6 98 181-284 61-167 (273)
54 2gb4_A Thiopurine S-methyltran 99.4 6.1E-13 2.1E-17 122.9 8.0 119 182-305 69-224 (252)
55 2ex4_A Adrenal gland protein A 99.4 5.1E-13 1.7E-17 119.9 7.0 120 181-305 79-222 (241)
56 3mgg_A Methyltransferase; NYSG 99.4 9.3E-13 3.2E-17 120.0 8.7 98 181-284 37-143 (276)
57 3bkw_A MLL3908 protein, S-aden 99.4 1.3E-12 4.4E-17 116.0 9.3 99 181-286 43-147 (243)
58 2vdw_A Vaccinia virus capping 99.4 2.9E-13 9.8E-18 128.2 5.4 103 182-286 49-172 (302)
59 3vc1_A Geranyl diphosphate 2-C 99.3 2.3E-12 7.9E-17 120.6 10.1 97 180-283 116-221 (312)
60 3g5t_A Trans-aconitate 3-methy 99.3 1.7E-12 5.7E-17 120.5 8.8 94 181-281 36-147 (299)
61 2pxx_A Uncharacterized protein 99.3 2.2E-12 7.4E-17 112.0 9.0 119 182-305 43-182 (215)
62 2p8j_A S-adenosylmethionine-de 99.3 1.2E-12 4E-17 113.9 7.2 98 182-285 24-130 (209)
63 1vlm_A SAM-dependent methyltra 99.3 2.4E-12 8.2E-17 114.0 9.2 91 182-284 48-140 (219)
64 2a14_A Indolethylamine N-methy 99.3 2.8E-13 9.5E-18 124.3 3.1 100 182-283 56-197 (263)
65 3m70_A Tellurite resistance pr 99.3 1.9E-12 6.5E-17 118.9 8.6 116 182-305 121-257 (286)
66 3g07_A 7SK snRNA methylphospha 99.3 5E-13 1.7E-17 124.7 4.2 101 181-284 46-221 (292)
67 3evz_A Methyltransferase; NYSG 99.3 8E-12 2.7E-16 110.8 11.7 137 182-321 56-219 (230)
68 3orh_A Guanidinoacetate N-meth 99.3 1E-12 3.4E-17 119.3 5.8 97 182-283 61-170 (236)
69 3iv6_A Putative Zn-dependent a 99.3 2.4E-12 8.1E-17 120.5 8.4 100 181-285 45-150 (261)
70 1dus_A MJ0882; hypothetical pr 99.3 6.6E-12 2.3E-16 106.7 10.4 113 181-298 52-173 (194)
71 4fsd_A Arsenic methyltransfera 99.3 2.5E-12 8.6E-17 124.7 8.6 97 181-283 83-203 (383)
72 2kw5_A SLR1183 protein; struct 99.3 3.4E-12 1.2E-16 110.8 8.3 92 184-283 32-131 (202)
73 1wzn_A SAM-dependent methyltra 99.3 4E-12 1.4E-16 114.1 8.8 99 181-285 41-147 (252)
74 3grz_A L11 mtase, ribosomal pr 99.3 1E-11 3.5E-16 108.5 11.1 115 182-305 61-182 (205)
75 3d2l_A SAM-dependent methyltra 99.3 3.7E-12 1.3E-16 113.0 8.0 97 183-285 35-139 (243)
76 3eey_A Putative rRNA methylase 99.3 9.6E-12 3.3E-16 107.8 10.4 140 182-323 23-189 (197)
77 3g2m_A PCZA361.24; SAM-depende 99.3 1.8E-12 6.1E-17 120.3 6.0 99 184-286 85-193 (299)
78 3fpf_A Mtnas, putative unchara 99.3 7.7E-12 2.6E-16 119.5 10.5 145 163-322 107-264 (298)
79 3hm2_A Precorrin-6Y C5,15-meth 99.3 7.7E-12 2.6E-16 105.8 9.4 112 182-302 26-147 (178)
80 1ve3_A Hypothetical protein PH 99.3 8.5E-12 2.9E-16 109.6 9.8 98 182-285 39-144 (227)
81 2zfu_A Nucleomethylin, cerebra 99.3 2.1E-11 7.2E-16 107.0 12.0 119 182-322 68-191 (215)
82 2g72_A Phenylethanolamine N-me 99.3 1.3E-12 4.3E-17 120.7 3.9 101 181-283 71-215 (289)
83 1ri5_A MRNA capping enzyme; me 99.3 2.4E-12 8.3E-17 117.6 5.7 101 182-286 65-177 (298)
84 1jsx_A Glucose-inhibited divis 99.3 2.1E-11 7E-16 106.3 11.2 128 182-322 66-205 (207)
85 1zx0_A Guanidinoacetate N-meth 99.3 2.2E-12 7.5E-17 115.8 5.1 101 182-285 61-172 (236)
86 3i53_A O-methyltransferase; CO 99.3 6.1E-12 2.1E-16 118.7 8.0 107 176-284 164-275 (332)
87 3dp7_A SAM-dependent methyltra 99.3 9.1E-12 3.1E-16 119.8 9.0 102 181-284 179-288 (363)
88 1xdz_A Methyltransferase GIDB; 99.3 5.8E-11 2E-15 107.1 13.6 158 159-326 48-223 (240)
89 3hp7_A Hemolysin, putative; st 99.3 2E-11 6.7E-16 116.2 10.8 130 182-321 86-249 (291)
90 3bgv_A MRNA CAP guanine-N7 met 99.3 3.8E-12 1.3E-16 119.0 5.7 102 182-286 35-158 (313)
91 3e05_A Precorrin-6Y C5,15-meth 99.3 6.2E-11 2.1E-15 103.6 13.1 116 181-304 40-164 (204)
92 3bkx_A SAM-dependent methyltra 99.2 1.1E-11 3.6E-16 112.7 8.2 99 181-283 43-159 (275)
93 1nt2_A Fibrillarin-like PRE-rR 99.2 4.4E-11 1.5E-15 107.0 12.1 97 181-283 57-161 (210)
94 2b3t_A Protein methyltransfera 99.2 3E-11 1E-15 111.3 11.3 135 182-321 110-275 (276)
95 2i62_A Nicotinamide N-methyltr 99.2 2.9E-12 1E-16 115.1 4.0 120 181-303 56-234 (265)
96 4dzr_A Protein-(glutamine-N5) 99.2 9.7E-12 3.3E-16 107.6 6.7 140 181-322 30-205 (215)
97 2ld4_A Anamorsin; methyltransf 99.2 4.3E-11 1.5E-15 102.3 9.0 128 180-329 11-175 (176)
98 2qe6_A Uncharacterized protein 99.2 5.7E-11 2E-15 110.7 10.5 101 181-285 77-198 (274)
99 3njr_A Precorrin-6Y methylase; 99.2 1.3E-10 4.4E-15 103.1 11.5 111 182-303 56-175 (204)
100 2yxd_A Probable cobalt-precorr 99.2 1.4E-10 4.8E-15 97.7 10.9 109 182-305 36-154 (183)
101 3g89_A Ribosomal RNA small sub 99.2 1.5E-10 5.1E-15 106.4 11.9 160 158-326 57-233 (249)
102 1yzh_A TRNA (guanine-N(7)-)-me 99.2 1.1E-10 3.6E-15 103.2 10.2 120 182-303 42-177 (214)
103 3lpm_A Putative methyltransfer 99.2 8E-11 2.7E-15 107.5 9.7 121 182-304 50-197 (259)
104 1qzz_A RDMB, aclacinomycin-10- 99.2 4.2E-11 1.4E-15 114.2 7.8 103 180-284 181-288 (374)
105 3tfw_A Putative O-methyltransf 99.2 2.1E-10 7E-15 104.6 12.0 132 182-322 64-225 (248)
106 3p9n_A Possible methyltransfer 99.2 2.3E-11 8E-16 105.3 5.4 124 156-286 22-156 (189)
107 2fca_A TRNA (guanine-N(7)-)-me 99.2 9.2E-11 3.1E-15 104.6 9.4 118 182-301 39-172 (213)
108 3q87_B N6 adenine specific DNA 99.1 1.9E-10 6.5E-15 98.9 10.9 128 182-320 24-160 (170)
109 3mcz_A O-methyltransferase; ad 99.1 3E-11 1E-15 114.5 6.3 107 174-283 171-287 (352)
110 3lst_A CALO1 methyltransferase 99.1 3.7E-11 1.3E-15 114.5 6.8 101 179-284 182-287 (348)
111 1x19_A CRTF-related protein; m 99.1 7.6E-11 2.6E-15 112.5 8.8 102 180-283 189-295 (359)
112 2nxc_A L11 mtase, ribosomal pr 99.1 1.6E-10 5.5E-15 105.9 10.5 113 182-305 121-241 (254)
113 3gwz_A MMCR; methyltransferase 99.1 1E-10 3.6E-15 112.6 9.6 105 177-283 198-307 (369)
114 2ip2_A Probable phenazine-spec 99.1 4.1E-11 1.4E-15 112.7 6.6 95 183-284 169-273 (334)
115 1ej0_A FTSJ; methyltransferase 99.1 1.1E-10 3.9E-15 96.9 8.5 133 182-321 23-177 (180)
116 3lbf_A Protein-L-isoaspartate 99.1 7.2E-11 2.5E-15 103.2 7.4 91 181-285 77-176 (210)
117 1l3i_A Precorrin-6Y methyltran 99.1 1.1E-10 3.8E-15 98.9 8.3 114 182-304 34-156 (192)
118 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.6E-10 5.6E-15 105.3 9.6 114 182-296 47-182 (235)
119 3ntv_A MW1564 protein; rossman 99.1 4.8E-10 1.6E-14 100.9 12.2 95 182-283 72-176 (232)
120 2r3s_A Uncharacterized protein 99.1 8.8E-11 3E-15 110.0 7.5 100 181-284 165-272 (335)
121 3m33_A Uncharacterized protein 99.1 5.3E-11 1.8E-15 106.2 5.6 88 182-282 49-141 (226)
122 1yb2_A Hypothetical protein TA 99.1 2.1E-10 7.2E-15 105.7 9.4 111 180-301 109-230 (275)
123 1tw3_A COMT, carminomycin 4-O- 99.1 7.8E-11 2.7E-15 111.9 6.7 104 180-285 182-290 (360)
124 3dxy_A TRNA (guanine-N(7)-)-me 99.1 1.5E-10 5E-15 104.3 7.9 114 182-296 35-164 (218)
125 3r0q_C Probable protein argini 99.1 4.1E-10 1.4E-14 109.3 11.6 100 181-283 63-169 (376)
126 3duw_A OMT, O-methyltransferas 99.1 2.6E-10 8.9E-15 100.7 9.3 94 182-284 59-168 (223)
127 3reo_A (ISO)eugenol O-methyltr 99.1 1.2E-10 4.3E-15 112.3 7.7 99 180-284 202-301 (368)
128 1vbf_A 231AA long hypothetical 99.1 1.1E-10 3.6E-15 103.6 6.7 92 182-286 71-168 (231)
129 1fp1_D Isoliquiritigenin 2'-O- 99.1 4.1E-11 1.4E-15 115.3 4.2 97 181-283 209-306 (372)
130 3tr6_A O-methyltransferase; ce 99.1 2E-10 6.7E-15 101.5 8.2 127 182-322 65-224 (225)
131 3q7e_A Protein arginine N-meth 99.1 2.7E-10 9.2E-15 109.5 9.7 99 182-283 67-173 (349)
132 2frn_A Hypothetical protein PH 99.1 4.2E-10 1.4E-14 104.6 10.5 114 182-304 126-253 (278)
133 3mb5_A SAM-dependent methyltra 99.1 3.3E-10 1.1E-14 102.1 9.3 107 182-299 94-211 (255)
134 1af7_A Chemotaxis receptor met 99.1 9E-11 3.1E-15 110.3 5.7 123 153-284 83-253 (274)
135 1p91_A Ribosomal RNA large sub 99.1 1.6E-10 5.5E-15 104.9 7.1 90 182-286 86-181 (269)
136 1fp2_A Isoflavone O-methyltran 99.1 9.4E-11 3.2E-15 111.7 5.5 98 181-284 188-289 (352)
137 1ws6_A Methyltransferase; stru 99.1 9.2E-11 3.2E-15 98.3 4.6 97 182-286 42-150 (171)
138 3u81_A Catechol O-methyltransf 99.1 8.8E-10 3E-14 97.9 11.0 132 182-323 59-214 (221)
139 3fzg_A 16S rRNA methylase; met 99.1 1.9E-10 6.4E-15 104.1 6.7 131 182-321 50-197 (200)
140 3opn_A Putative hemolysin; str 99.0 5E-10 1.7E-14 102.2 9.6 131 182-322 38-202 (232)
141 2fyt_A Protein arginine N-meth 99.0 2.3E-10 7.9E-15 109.7 7.7 96 182-280 65-168 (340)
142 2ift_A Putative methylase HI07 99.0 1.6E-10 5.4E-15 102.0 5.9 99 182-286 54-166 (201)
143 3htx_A HEN1; HEN1, small RNA m 99.0 6.7E-10 2.3E-14 118.6 11.6 101 182-285 722-836 (950)
144 2pwy_A TRNA (adenine-N(1)-)-me 99.0 6.6E-10 2.3E-14 99.7 9.6 107 182-301 97-217 (258)
145 2plw_A Ribosomal RNA methyltra 99.0 4.6E-10 1.6E-14 97.2 7.8 137 182-322 23-196 (201)
146 3p9c_A Caffeic acid O-methyltr 99.0 3.3E-10 1.1E-14 109.3 7.6 99 180-284 200-299 (364)
147 2y1w_A Histone-arginine methyl 99.0 6.9E-10 2.4E-14 106.4 9.7 99 181-282 50-154 (348)
148 2yxe_A Protein-L-isoaspartate 99.0 3.4E-10 1.2E-14 99.3 6.9 93 182-286 78-180 (215)
149 2vdv_E TRNA (guanine-N(7)-)-me 99.0 5.9E-10 2E-14 101.0 8.3 113 182-296 50-187 (246)
150 2esr_A Methyltransferase; stru 99.0 1.2E-10 4.1E-15 99.2 3.3 99 182-286 32-141 (177)
151 3c3p_A Methyltransferase; NP_9 99.0 1.5E-09 5.3E-14 95.3 10.6 92 182-283 57-160 (210)
152 2ipx_A RRNA 2'-O-methyltransfe 99.0 3.3E-09 1.1E-13 94.7 12.8 97 181-285 77-184 (233)
153 1nv8_A HEMK protein; class I a 99.0 9.8E-10 3.4E-14 102.9 9.7 148 159-322 107-282 (284)
154 1o9g_A RRNA methyltransferase; 99.0 2.6E-10 9E-15 103.2 5.6 105 181-286 51-217 (250)
155 3gdh_A Trimethylguanosine synt 99.0 2.3E-11 8E-16 108.7 -1.4 96 182-283 79-181 (241)
156 1fbn_A MJ fibrillarin homologu 99.0 2.5E-09 8.5E-14 95.7 11.8 95 181-282 74-177 (230)
157 4dcm_A Ribosomal RNA large sub 99.0 5.2E-10 1.8E-14 109.1 7.6 114 182-296 223-349 (375)
158 1g8a_A Fibrillarin-like PRE-rR 99.0 3.9E-09 1.3E-13 93.6 12.7 96 181-282 73-177 (227)
159 3dr5_A Putative O-methyltransf 99.0 6.1E-10 2.1E-14 100.4 7.5 131 183-323 58-214 (221)
160 2ozv_A Hypothetical protein AT 99.0 4E-09 1.4E-13 96.9 13.0 119 182-302 37-188 (260)
161 1g6q_1 HnRNP arginine N-methyl 99.0 2.3E-09 8E-14 101.9 11.8 97 182-281 39-143 (328)
162 2gpy_A O-methyltransferase; st 99.0 1.1E-09 3.8E-14 97.7 8.7 95 182-283 55-160 (233)
163 3mq2_A 16S rRNA methyltransfer 99.0 4.2E-10 1.4E-14 99.1 5.7 96 182-283 28-140 (218)
164 2pjd_A Ribosomal RNA small sub 99.0 1.7E-10 5.8E-15 110.2 3.3 101 182-285 197-305 (343)
165 3dmg_A Probable ribosomal RNA 99.0 7E-10 2.4E-14 108.5 7.7 100 182-285 234-342 (381)
166 3p2e_A 16S rRNA methylase; met 99.0 4.5E-10 1.5E-14 101.6 5.5 96 182-281 25-137 (225)
167 3bwc_A Spermidine synthase; SA 99.0 1.5E-09 5.2E-14 102.4 9.2 139 181-322 95-258 (304)
168 2bm8_A Cephalosporin hydroxyla 99.0 1E-09 3.5E-14 99.8 7.6 112 182-303 82-214 (236)
169 2fhp_A Methylase, putative; al 99.0 5.3E-10 1.8E-14 95.2 5.3 99 182-286 45-157 (187)
170 4df3_A Fibrillarin-like rRNA/T 99.0 7E-09 2.4E-13 95.6 13.2 101 177-283 73-182 (233)
171 1zg3_A Isoflavanone 4'-O-methy 99.0 3.3E-10 1.1E-14 108.2 4.4 97 182-284 194-294 (358)
172 3dou_A Ribosomal RNA large sub 98.9 2.4E-09 8.1E-14 94.5 9.5 133 182-322 26-181 (191)
173 2hnk_A SAM-dependent O-methylt 98.9 2.4E-09 8.2E-14 96.2 9.4 131 182-323 61-232 (239)
174 2yvl_A TRMI protein, hypotheti 98.9 3.9E-09 1.3E-13 94.1 10.5 106 182-298 92-206 (248)
175 2fpo_A Methylase YHHF; structu 98.9 1.1E-09 3.9E-14 96.6 6.4 99 182-286 55-163 (202)
176 1dl5_A Protein-L-isoaspartate 98.9 9.3E-10 3.2E-14 103.8 6.0 95 182-286 76-178 (317)
177 4a6d_A Hydroxyindole O-methylt 98.9 1.4E-09 4.8E-14 104.5 7.1 107 176-284 174-284 (353)
178 2nyu_A Putative ribosomal RNA 98.9 4.1E-09 1.4E-13 90.7 9.3 100 182-284 23-146 (196)
179 1i9g_A Hypothetical protein RV 98.9 3.5E-09 1.2E-13 96.6 9.1 91 182-285 100-205 (280)
180 1o54_A SAM-dependent O-methylt 98.9 4.5E-09 1.5E-13 96.6 9.7 111 182-301 113-232 (277)
181 1jg1_A PIMT;, protein-L-isoasp 98.9 9.3E-10 3.2E-14 98.6 4.9 94 182-286 92-192 (235)
182 2avd_A Catechol-O-methyltransf 98.9 5.1E-09 1.8E-13 92.6 9.5 93 182-283 70-179 (229)
183 2oxt_A Nucleoside-2'-O-methylt 98.9 5.7E-10 1.9E-14 104.1 3.3 97 182-283 75-185 (265)
184 3bzb_A Uncharacterized protein 98.9 1.5E-09 5E-14 101.0 6.0 96 182-282 80-204 (281)
185 2p41_A Type II methyltransfera 98.9 4.3E-10 1.5E-14 106.9 2.1 102 182-284 83-192 (305)
186 3uwp_A Histone-lysine N-methyl 98.9 3.6E-09 1.2E-13 105.6 8.7 98 182-285 174-290 (438)
187 3b3j_A Histone-arginine methyl 98.9 1.9E-09 6.4E-14 108.6 6.3 98 181-281 158-261 (480)
188 3cbg_A O-methyltransferase; cy 98.8 5.6E-09 1.9E-13 94.0 8.4 96 182-283 73-182 (232)
189 1ne2_A Hypothetical protein TA 98.8 5.7E-09 2E-13 90.7 8.1 108 182-298 52-161 (200)
190 3r3h_A O-methyltransferase, SA 98.8 1.2E-08 4.2E-13 93.0 10.6 127 182-322 61-220 (242)
191 2wa2_A Non-structural protein 98.8 5.7E-10 2E-14 104.7 1.8 96 182-283 83-193 (276)
192 1mjf_A Spermidine synthase; sp 98.8 7.1E-09 2.4E-13 96.7 8.9 99 182-283 76-193 (281)
193 3adn_A Spermidine synthase; am 98.8 3.9E-09 1.3E-13 99.8 7.2 100 181-283 83-198 (294)
194 3id6_C Fibrillarin-like rRNA/T 98.8 1.1E-08 3.9E-13 93.9 10.0 103 174-283 69-181 (232)
195 2b25_A Hypothetical protein; s 98.8 3.6E-09 1.2E-13 100.1 5.8 95 182-285 106-221 (336)
196 1i1n_A Protein-L-isoaspartate 98.8 3.7E-09 1.2E-13 93.5 5.5 92 182-285 78-184 (226)
197 4azs_A Methyltransferase WBDD; 98.8 1.2E-09 4E-14 111.6 2.4 98 182-283 67-173 (569)
198 4hc4_A Protein arginine N-meth 98.8 1.1E-08 3.9E-13 100.2 9.3 116 166-282 67-188 (376)
199 1r18_A Protein-L-isoaspartate( 98.8 5.4E-09 1.8E-13 93.0 6.2 93 182-285 85-196 (227)
200 3sso_A Methyltransferase; macr 98.8 7.9E-10 2.7E-14 109.9 0.8 124 167-302 203-361 (419)
201 3giw_A Protein of unknown func 98.8 3.5E-09 1.2E-13 100.2 4.7 99 181-283 78-200 (277)
202 1ixk_A Methyltransferase; open 98.8 1E-08 3.6E-13 97.1 7.9 120 182-301 119-268 (315)
203 1wy7_A Hypothetical protein PH 98.8 5.4E-08 1.9E-12 84.6 11.7 117 182-303 50-170 (207)
204 1sui_A Caffeoyl-COA O-methyltr 98.8 9.4E-09 3.2E-13 94.0 7.0 93 182-283 80-190 (247)
205 1iy9_A Spermidine synthase; ro 98.8 2.7E-08 9.2E-13 92.7 10.2 141 181-323 75-237 (275)
206 3tma_A Methyltransferase; thum 98.8 3.1E-08 1E-12 94.6 10.7 134 181-321 203-353 (354)
207 2pbf_A Protein-L-isoaspartate 98.8 7E-09 2.4E-13 91.7 5.7 95 182-285 81-195 (227)
208 1uir_A Polyamine aminopropyltr 98.7 1.6E-08 5.5E-13 95.9 8.3 139 182-322 78-242 (314)
209 3c3y_A Pfomt, O-methyltransfer 98.7 3.4E-08 1.1E-12 89.4 10.0 93 182-283 71-181 (237)
210 1u2z_A Histone-lysine N-methyl 98.7 7.3E-09 2.5E-13 103.4 5.9 98 181-284 242-360 (433)
211 2b2c_A Spermidine synthase; be 98.7 2.1E-08 7.2E-13 95.7 8.8 100 182-283 109-222 (314)
212 2igt_A SAM dependent methyltra 98.7 1.7E-08 6E-13 96.8 8.2 116 182-303 154-299 (332)
213 2i7c_A Spermidine synthase; tr 98.7 3.2E-08 1.1E-12 92.4 9.6 101 181-284 78-193 (283)
214 2pt6_A Spermidine synthase; tr 98.7 3.2E-08 1.1E-12 94.4 9.2 139 182-323 117-278 (321)
215 1inl_A Spermidine synthase; be 98.7 1.7E-08 5.9E-13 95.0 6.7 99 182-284 91-206 (296)
216 1xj5_A Spermidine synthase 1; 98.7 1.2E-08 4.2E-13 98.1 5.5 102 181-283 120-235 (334)
217 2h00_A Methyltransferase 10 do 98.7 4E-09 1.4E-13 95.2 1.9 100 181-283 65-192 (254)
218 3gjy_A Spermidine synthase; AP 98.7 2.1E-08 7.1E-13 96.4 6.2 100 183-284 91-201 (317)
219 3a27_A TYW2, uncharacterized p 98.6 3.7E-08 1.3E-12 91.2 7.5 113 182-303 120-246 (272)
220 2o07_A Spermidine synthase; st 98.6 2.2E-08 7.4E-13 94.9 5.8 102 181-283 95-209 (304)
221 4dmg_A Putative uncharacterize 98.6 5.5E-08 1.9E-12 95.6 8.8 100 182-284 215-327 (393)
222 2cmg_A Spermidine synthase; tr 98.6 1.4E-07 4.8E-12 87.6 10.9 92 181-283 72-171 (262)
223 1zq9_A Probable dimethyladenos 98.6 1.6E-08 5.4E-13 94.6 3.6 97 181-280 28-144 (285)
224 3ajd_A Putative methyltransfer 98.6 3.3E-08 1.1E-12 91.5 5.6 99 182-283 84-211 (274)
225 2xyq_A Putative 2'-O-methyl tr 98.6 2E-07 6.8E-12 88.4 10.4 128 182-321 64-210 (290)
226 3k6r_A Putative transferase PH 98.6 2.1E-07 7.2E-12 87.7 10.1 137 152-305 104-254 (278)
227 2qm3_A Predicted methyltransfe 98.6 1.7E-07 6E-12 90.5 9.6 114 182-301 173-302 (373)
228 3kr9_A SAM-dependent methyltra 98.6 2.4E-07 8.1E-12 85.0 9.8 132 182-321 16-157 (225)
229 2f8l_A Hypothetical protein LM 98.6 8.4E-08 2.9E-12 91.4 7.1 141 181-322 130-305 (344)
230 3c0k_A UPF0064 protein YCCW; P 98.5 1.1E-07 3.6E-12 92.6 7.2 99 182-285 221-341 (396)
231 2b78_A Hypothetical protein SM 98.5 1.3E-07 4.4E-12 92.2 7.3 118 182-301 213-355 (385)
232 1wxx_A TT1595, hypothetical pr 98.5 1.4E-07 4.8E-12 91.4 7.4 101 182-285 210-327 (382)
233 2yxl_A PH0851 protein, 450AA l 98.5 2.4E-07 8.3E-12 91.9 9.1 99 182-284 260-390 (450)
234 3frh_A 16S rRNA methylase; met 98.5 8E-07 2.7E-11 83.0 11.6 132 180-322 104-252 (253)
235 3lcv_B Sisomicin-gentamicin re 98.5 2.4E-07 8E-12 87.6 8.0 141 170-321 123-281 (281)
236 2as0_A Hypothetical protein PH 98.5 1.8E-07 6.1E-12 90.9 7.3 99 182-285 218-337 (396)
237 3lec_A NADB-rossmann superfami 98.5 9.3E-07 3.2E-11 81.3 11.6 134 182-322 22-164 (230)
238 3gnl_A Uncharacterized protein 98.5 6.9E-07 2.4E-11 82.9 10.6 116 182-304 22-145 (244)
239 2yx1_A Hypothetical protein MJ 98.5 2.2E-07 7.5E-12 88.8 7.2 92 182-284 196-292 (336)
240 2frx_A Hypothetical protein YE 98.4 2E-07 6.7E-12 93.9 6.9 102 181-283 117-246 (479)
241 2jjq_A Uncharacterized RNA met 98.4 6.6E-07 2.2E-11 88.7 10.3 95 182-288 291-392 (425)
242 1sqg_A SUN protein, FMU protei 98.4 2.5E-07 8.7E-12 91.0 6.7 99 182-283 247-374 (429)
243 2ih2_A Modification methylase 98.4 3.3E-07 1.1E-11 88.4 7.1 110 182-300 40-186 (421)
244 3tm4_A TRNA (guanine N2-)-meth 98.4 8.4E-07 2.9E-11 85.9 8.9 118 182-304 218-348 (373)
245 3v97_A Ribosomal RNA large sub 98.4 1.5E-07 5.1E-12 98.9 3.8 99 182-285 540-659 (703)
246 3m6w_A RRNA methylase; rRNA me 98.3 1.7E-07 5.8E-12 94.3 3.5 101 182-283 102-229 (464)
247 2h1r_A Dimethyladenosine trans 98.3 8.2E-07 2.8E-11 83.5 7.0 91 182-278 43-154 (299)
248 1uwv_A 23S rRNA (uracil-5-)-me 98.3 2E-06 7E-11 84.8 9.6 111 182-302 287-408 (433)
249 2okc_A Type I restriction enzy 98.2 2.8E-06 9.7E-11 83.9 9.5 141 182-322 172-357 (445)
250 3m4x_A NOL1/NOP2/SUN family pr 98.2 8.6E-07 3E-11 88.9 5.7 118 182-301 106-256 (456)
251 3b5i_A S-adenosyl-L-methionine 98.2 3.5E-07 1.2E-11 89.7 2.0 45 239-283 145-225 (374)
252 1yub_A Ermam, rRNA methyltrans 98.1 4.7E-08 1.6E-12 88.7 -5.9 97 182-285 30-147 (245)
253 1qam_A ERMC' methyltransferase 98.1 1.2E-06 4.1E-11 79.9 3.4 42 180-224 29-71 (244)
254 2qfm_A Spermine synthase; sper 98.1 2.9E-06 9.8E-11 83.1 5.3 105 180-286 187-317 (364)
255 3evf_A RNA-directed RNA polyme 98.0 6.9E-06 2.3E-10 77.6 6.3 134 182-322 75-227 (277)
256 1m6e_X S-adenosyl-L-methionnin 97.9 7.7E-06 2.6E-10 79.8 5.9 97 182-283 52-209 (359)
257 2efj_A 3,7-dimethylxanthine me 97.9 2.1E-05 7.2E-10 77.4 7.7 45 239-283 144-225 (384)
258 2dul_A N(2),N(2)-dimethylguano 97.8 1.2E-05 4.1E-10 78.6 3.9 92 182-282 48-163 (378)
259 3ldu_A Putative methylase; str 97.8 1.6E-05 5.6E-10 77.6 4.5 109 180-288 194-349 (385)
260 3bt7_A TRNA (uracil-5-)-methyl 97.6 3E-05 1E-09 74.7 4.4 91 183-285 215-328 (369)
261 3k0b_A Predicted N6-adenine-sp 97.6 4.1E-05 1.4E-09 75.0 5.1 108 181-288 201-355 (393)
262 3axs_A Probable N(2),N(2)-dime 97.6 5.3E-05 1.8E-09 74.6 5.7 93 182-283 53-158 (392)
263 3ldg_A Putative uncharacterize 97.5 9.1E-05 3.1E-09 72.5 6.3 107 181-287 194-347 (384)
264 2r6z_A UPF0341 protein in RSP 97.5 3.6E-05 1.2E-09 71.2 3.0 72 182-256 84-174 (258)
265 2ar0_A M.ecoki, type I restric 97.5 0.0002 6.8E-09 73.0 8.6 141 182-322 170-362 (541)
266 3gcz_A Polyprotein; flavivirus 97.5 5.6E-05 1.9E-09 71.6 3.6 134 182-322 91-244 (282)
267 4gqb_A Protein arginine N-meth 97.4 0.0003 1E-08 73.4 8.5 128 151-280 322-464 (637)
268 3eld_A Methyltransferase; flav 97.4 0.00013 4.3E-09 69.7 5.2 133 181-321 81-233 (300)
269 3s1s_A Restriction endonucleas 97.3 0.0014 4.7E-08 70.3 11.6 139 182-322 322-517 (878)
270 2b9e_A NOL1/NOP2/SUN domain fa 97.3 0.0011 3.9E-08 62.8 10.0 98 182-283 103-234 (309)
271 3gru_A Dimethyladenosine trans 97.2 0.00025 8.7E-09 67.1 5.2 68 182-252 51-123 (295)
272 3fut_A Dimethyladenosine trans 97.2 0.00024 8.3E-09 66.4 4.8 64 184-250 49-117 (271)
273 3khk_A Type I restriction-modi 97.2 0.00063 2.1E-08 69.5 7.8 139 184-322 247-446 (544)
274 3ftd_A Dimethyladenosine trans 97.1 0.0019 6.6E-08 59.1 9.6 41 182-224 32-73 (249)
275 3ll7_A Putative methyltransfer 97.1 0.00036 1.2E-08 69.1 4.4 145 166-321 82-246 (410)
276 3ua3_A Protein arginine N-meth 97.0 0.0005 1.7E-08 72.5 5.0 127 150-280 376-531 (745)
277 4auk_A Ribosomal RNA large sub 96.8 0.014 4.8E-07 57.2 13.3 88 182-281 212-304 (375)
278 3cvo_A Methyltransferase-like 96.8 0.0049 1.7E-07 55.4 9.3 34 242-283 121-154 (202)
279 2oyr_A UPF0341 protein YHIQ; a 96.8 0.00049 1.7E-08 64.0 2.7 105 183-295 90-211 (258)
280 3lkd_A Type I restriction-modi 96.7 0.0052 1.8E-07 62.7 9.6 141 181-322 221-408 (542)
281 3o4f_A Spermidine synthase; am 96.7 0.0031 1.1E-07 59.9 7.3 102 180-283 82-198 (294)
282 2qy6_A UPF0209 protein YFCK; s 96.7 0.0015 5.3E-08 60.4 5.1 73 243-322 173-247 (257)
283 1m6y_A S-adenosyl-methyltransf 96.7 0.00075 2.6E-08 63.9 2.8 42 182-224 27-69 (301)
284 3tqs_A Ribosomal RNA small sub 96.6 0.0011 3.8E-08 61.1 3.9 40 182-224 30-70 (255)
285 3v97_A Ribosomal RNA large sub 96.6 0.003 1E-07 66.3 7.3 82 208-289 258-353 (703)
286 2wk1_A NOVP; transferase, O-me 96.5 0.0099 3.4E-07 55.9 9.3 77 236-322 201-281 (282)
287 2k4m_A TR8_protein, UPF0146 pr 96.3 0.011 3.8E-07 51.2 8.0 100 157-283 16-121 (153)
288 3uzu_A Ribosomal RNA small sub 96.2 0.0014 4.8E-08 61.3 1.9 43 182-224 43-87 (279)
289 3c6k_A Spermine synthase; sper 96.1 0.0098 3.4E-07 58.4 7.4 116 181-298 205-350 (381)
290 4fzv_A Putative methyltransfer 96.1 0.0051 1.7E-07 59.8 5.3 101 181-283 148-284 (359)
291 3lkz_A Non-structural protein 95.5 0.058 2E-06 51.6 9.5 108 182-294 95-219 (321)
292 2px2_A Genome polyprotein [con 95.3 0.012 4E-07 55.3 3.9 94 182-283 74-183 (269)
293 1qyr_A KSGA, high level kasuga 95.1 0.011 3.8E-07 54.3 3.2 40 182-224 22-62 (252)
294 2zig_A TTHA0409, putative modi 94.6 0.027 9.3E-07 52.3 4.4 40 182-224 236-276 (297)
295 3r24_A NSP16, 2'-O-methyl tran 94.1 0.31 1E-05 46.9 10.5 128 181-321 109-256 (344)
296 2vz8_A Fatty acid synthase; tr 93.1 0.036 1.2E-06 65.7 2.8 40 242-284 1310-1349(2512)
297 1boo_A Protein (N-4 cytosine-s 92.9 0.14 4.8E-06 48.3 6.1 22 262-283 63-84 (323)
298 2zig_A TTHA0409, putative modi 92.7 0.17 5.7E-06 47.0 6.2 21 263-283 77-97 (297)
299 3p8z_A Mtase, non-structural p 91.9 0.19 6.6E-06 46.8 5.4 109 182-294 79-201 (267)
300 1g60_A Adenine-specific methyl 91.5 0.3 1E-05 44.3 6.3 22 262-283 53-74 (260)
301 2c7p_A Modification methylase 90.5 7.5 0.00026 36.6 15.2 64 183-250 12-78 (327)
302 3vyw_A MNMC2; tRNA wobble urid 90.2 1.3 4.5E-05 42.1 9.6 79 237-322 179-260 (308)
303 3ufb_A Type I restriction-modi 90.0 0.81 2.8E-05 46.2 8.5 141 181-322 217-413 (530)
304 1g60_A Adenine-specific methyl 88.8 0.36 1.2E-05 43.8 4.4 40 182-224 213-253 (260)
305 1wg8_A Predicted S-adenosylmet 88.4 0.35 1.2E-05 45.6 4.1 39 182-223 23-62 (285)
306 3ggo_A Prephenate dehydrogenas 87.6 3.6 0.00012 38.4 10.6 123 165-297 16-144 (314)
307 4dcm_A Ribosomal RNA large sub 87.2 1.4 4.7E-05 42.4 7.6 94 183-285 40-138 (375)
308 1rjd_A PPM1P, carboxy methyl t 86.4 0.9 3.1E-05 43.3 5.8 100 181-283 97-232 (334)
309 1eg2_A Modification methylase 86.3 0.42 1.5E-05 45.2 3.4 23 262-284 85-107 (319)
310 1f8f_A Benzyl alcohol dehydrog 85.0 0.98 3.4E-05 42.6 5.3 91 182-283 191-289 (371)
311 2uyo_A Hypothetical protein ML 84.6 2 6.8E-05 40.5 7.1 100 181-284 102-219 (310)
312 1g55_A DNA cytosine methyltran 83.7 6.2 0.00021 37.3 10.2 42 183-224 3-45 (343)
313 3g7u_A Cytosine-specific methy 82.0 9.9 0.00034 36.6 11.1 37 183-221 3-40 (376)
314 3dmg_A Probable ribosomal RNA 81.8 2.5 8.5E-05 40.8 6.7 101 183-296 47-153 (381)
315 1pqw_A Polyketide synthase; ro 81.2 2.2 7.4E-05 36.1 5.4 91 182-285 39-139 (198)
316 3two_A Mannitol dehydrogenase; 80.8 1.5 5E-05 40.9 4.6 86 182-283 177-265 (348)
317 1pl8_A Human sorbitol dehydrog 80.3 4.1 0.00014 38.1 7.5 91 182-283 172-273 (356)
318 2ld4_A Anamorsin; methyltransf 80.2 0.54 1.8E-05 39.0 1.2 21 10-30 82-102 (176)
319 3ps9_A TRNA 5-methylaminomethy 79.9 2.5 8.7E-05 43.2 6.4 44 242-286 178-222 (676)
320 3s2e_A Zinc-containing alcohol 79.8 1.8 6E-05 40.2 4.8 90 182-283 167-263 (340)
321 4dvj_A Putative zinc-dependent 78.9 4.4 0.00015 38.2 7.3 91 181-283 171-270 (363)
322 1v3u_A Leukotriene B4 12- hydr 78.9 3.4 0.00012 38.0 6.4 89 182-283 146-244 (333)
323 3pvc_A TRNA 5-methylaminomethy 77.4 3.8 0.00013 42.1 6.8 44 242-286 170-214 (689)
324 3qv2_A 5-cytosine DNA methyltr 77.0 10 0.00034 35.9 9.1 91 182-274 10-117 (327)
325 3gms_A Putative NADPH:quinone 76.9 5.8 0.0002 36.7 7.4 90 181-283 144-243 (340)
326 3ubt_Y Modification methylase 76.4 32 0.0011 31.3 12.3 24 184-207 2-25 (331)
327 2j3h_A NADP-dependent oxidored 76.1 5.4 0.00018 36.8 6.9 89 182-283 156-255 (345)
328 1e3j_A NADP(H)-dependent ketos 76.1 4.6 0.00016 37.6 6.5 90 182-283 169-271 (352)
329 2hcy_A Alcohol dehydrogenase 1 75.9 2 6.9E-05 40.0 3.9 89 182-283 170-269 (347)
330 2h6e_A ADH-4, D-arabinose 1-de 75.0 3.5 0.00012 38.3 5.3 89 182-283 171-269 (344)
331 2zfu_A Nucleomethylin, cerebra 75.0 2.2 7.6E-05 36.2 3.7 56 11-81 133-193 (215)
332 3grz_A L11 mtase, ribosomal pr 74.7 2.2 7.6E-05 36.0 3.6 54 12-82 142-199 (205)
333 4ej6_A Putative zinc-binding d 74.3 4.1 0.00014 38.5 5.7 91 182-283 183-284 (370)
334 2a14_A Indolethylamine N-methy 72.8 0.56 1.9E-05 42.0 -0.7 18 13-30 181-198 (263)
335 4dkj_A Cytosine-specific methy 72.6 10 0.00034 37.1 8.1 21 183-203 11-31 (403)
336 1uuf_A YAHK, zinc-type alcohol 72.6 2.8 9.7E-05 39.6 4.1 87 182-283 195-288 (369)
337 2fzw_A Alcohol dehydrogenase c 72.3 5.9 0.0002 37.1 6.2 91 182-283 191-292 (373)
338 3orh_A Guanidinoacetate N-meth 72.0 0.58 2E-05 41.5 -0.9 17 12-28 153-169 (236)
339 3goh_A Alcohol dehydrogenase, 72.0 7.3 0.00025 35.5 6.6 86 181-283 142-229 (315)
340 4h0n_A DNMT2; SAH binding, tra 71.9 9.7 0.00033 36.0 7.7 37 183-219 4-41 (333)
341 2dph_A Formaldehyde dismutase; 71.6 1.8 6.3E-05 41.2 2.5 97 182-283 186-299 (398)
342 3nx4_A Putative oxidoreductase 71.0 7.9 0.00027 35.3 6.6 86 185-283 150-241 (324)
343 1rjw_A ADH-HT, alcohol dehydro 70.9 11 0.00038 34.8 7.7 90 182-283 165-261 (339)
344 2jhf_A Alcohol dehydrogenase E 70.8 9.7 0.00033 35.6 7.4 91 182-283 192-293 (374)
345 1i4w_A Mitochondrial replicati 70.7 6 0.00021 38.0 5.9 49 153-202 31-79 (353)
346 3tka_A Ribosomal RNA small sub 70.4 5.7 0.00019 38.4 5.6 39 182-221 58-98 (347)
347 3cgg_A SAM-dependent methyltra 70.2 2.8 9.5E-05 34.3 3.0 22 11-32 129-150 (195)
348 2b5w_A Glucose dehydrogenase; 70.2 4.6 0.00016 37.7 4.9 89 183-283 174-273 (357)
349 1p0f_A NADP-dependent alcohol 69.5 7.9 0.00027 36.3 6.4 91 182-283 192-293 (373)
350 3uog_A Alcohol dehydrogenase; 69.3 3.6 0.00012 38.6 4.0 89 182-283 190-287 (363)
351 1cdo_A Alcohol dehydrogenase; 69.0 9 0.00031 35.9 6.7 91 182-283 193-294 (374)
352 3jv7_A ADH-A; dehydrogenase, n 68.8 3.3 0.00011 38.4 3.5 90 182-283 172-270 (345)
353 4b7c_A Probable oxidoreductase 68.8 4.6 0.00016 37.2 4.5 89 182-283 150-248 (336)
354 3hnr_A Probable methyltransfer 68.4 2.4 8.1E-05 36.0 2.3 73 11-83 127-216 (220)
355 3lcc_A Putative methyl chlorid 68.1 2.8 9.6E-05 36.2 2.7 52 11-69 153-204 (235)
356 3fpc_A NADP-dependent alcohol 67.5 5.3 0.00018 37.2 4.7 90 182-283 167-266 (352)
357 3fbg_A Putative arginate lyase 67.4 11 0.00038 34.9 6.9 89 182-282 151-247 (346)
358 3opn_A Putative hemolysin; str 67.0 1.8 6.2E-05 38.6 1.3 58 11-69 119-181 (232)
359 1piw_A Hypothetical zinc-type 66.5 2.4 8.2E-05 39.7 2.1 89 182-283 180-276 (360)
360 3trk_A Nonstructural polyprote 66.4 8.3 0.00028 36.5 5.6 78 242-321 210-301 (324)
361 1e3i_A Alcohol dehydrogenase, 65.6 12 0.00039 35.1 6.7 91 182-283 196-297 (376)
362 3dh0_A SAM dependent methyltra 65.1 3.2 0.00011 35.1 2.5 64 11-81 125-195 (219)
363 1tt7_A YHFP; alcohol dehydroge 64.2 8.6 0.0003 35.2 5.4 88 184-283 153-247 (330)
364 2eih_A Alcohol dehydrogenase; 64.1 7.7 0.00026 35.9 5.1 89 182-283 167-265 (343)
365 4hg2_A Methyltransferase type 64.0 1 3.4E-05 41.0 -1.0 19 11-29 117-135 (257)
366 3uko_A Alcohol dehydrogenase c 63.1 11 0.00039 35.3 6.1 91 182-283 194-295 (378)
367 1vj0_A Alcohol dehydrogenase, 62.0 4.1 0.00014 38.6 2.8 90 182-283 196-298 (380)
368 3jyn_A Quinone oxidoreductase; 61.6 15 0.0005 33.7 6.5 90 181-283 140-239 (325)
369 1jvb_A NAD(H)-dependent alcoho 61.6 7.8 0.00027 35.9 4.6 90 182-283 171-271 (347)
370 2km1_A Protein DRE2; yeast, an 61.6 6 0.00021 33.3 3.4 59 237-299 52-111 (136)
371 3m6i_A L-arabinitol 4-dehydrog 60.6 8.2 0.00028 35.9 4.6 91 182-283 180-283 (363)
372 2g72_A Phenylethanolamine N-me 60.0 1.5 5.1E-05 39.5 -0.6 18 12-29 198-215 (289)
373 1xa0_A Putative NADPH dependen 60.0 8 0.00027 35.4 4.3 88 184-283 152-246 (328)
374 3jwg_A HEN1, methyltransferase 59.9 11 0.00037 31.9 4.9 68 11-82 123-213 (219)
375 2vdw_A Vaccinia virus capping 58.7 1.3 4.5E-05 41.1 -1.3 21 11-31 151-171 (302)
376 3hp7_A Hemolysin, putative; st 57.9 8.6 0.0003 35.9 4.2 56 11-67 167-227 (291)
377 1yb5_A Quinone oxidoreductase; 57.7 24 0.00083 32.8 7.3 89 182-283 171-269 (351)
378 2h78_A Hibadh, 3-hydroxyisobut 57.4 26 0.0009 31.5 7.4 101 183-296 4-112 (302)
379 4gek_A TRNA (CMO5U34)-methyltr 57.2 1.6 5.6E-05 39.6 -0.9 20 11-30 160-179 (261)
380 2c0c_A Zinc binding alcohol de 56.8 11 0.00039 35.2 4.9 89 182-283 164-261 (362)
381 3qwb_A Probable quinone oxidor 56.6 18 0.00063 33.1 6.2 90 181-283 148-247 (334)
382 2d8a_A PH0655, probable L-thre 55.4 7.3 0.00025 36.1 3.3 91 181-283 167-267 (348)
383 1nt2_A Fibrillarin-like PRE-rR 55.4 1.8 6.2E-05 37.7 -0.9 48 12-70 144-193 (210)
384 3iht_A S-adenosyl-L-methionine 55.3 1.5 5E-05 38.4 -1.4 102 184-286 43-150 (174)
385 4eye_A Probable oxidoreductase 55.1 17 0.00056 33.7 5.7 90 181-283 159-257 (342)
386 1boo_A Protein (N-4 cytosine-s 54.7 11 0.00039 35.0 4.5 40 182-224 253-293 (323)
387 3gqv_A Enoyl reductase; medium 54.5 23 0.00079 33.1 6.6 91 181-283 164-263 (371)
388 2f1k_A Prephenate dehydrogenas 54.4 60 0.0021 28.6 9.1 86 184-282 2-90 (279)
389 3p2e_A 16S rRNA methylase; met 54.2 2.1 7.3E-05 37.7 -0.6 16 12-27 122-137 (225)
390 2p7i_A Hypothetical protein; p 54.1 1.9 6.4E-05 36.9 -1.0 21 11-31 122-143 (250)
391 3ocj_A Putative exported prote 53.8 10 0.00034 34.3 3.8 19 11-29 209-227 (305)
392 3evz_A Methyltransferase; NYSG 53.7 11 0.00039 32.0 4.0 20 11-30 161-180 (230)
393 2aot_A HMT, histamine N-methyl 53.6 2.1 7.3E-05 38.7 -0.8 19 11-29 154-172 (292)
394 3fwz_A Inner membrane protein 53.5 43 0.0015 26.5 7.3 95 183-286 8-108 (140)
395 2cdc_A Glucose dehydrogenase g 53.0 6.4 0.00022 36.9 2.4 93 182-283 181-278 (366)
396 1kol_A Formaldehyde dehydrogen 52.7 8 0.00027 36.6 3.1 97 182-283 186-300 (398)
397 1iz0_A Quinone oxidoreductase; 52.5 13 0.00044 33.6 4.3 84 182-283 126-218 (302)
398 3mq2_A 16S rRNA methyltransfer 52.2 4.4 0.00015 34.5 1.1 20 11-30 122-141 (218)
399 1zsy_A Mitochondrial 2-enoyl t 52.2 59 0.002 30.0 9.0 91 182-282 168-269 (357)
400 3dli_A Methyltransferase; PSI- 52.2 2.3 7.7E-05 37.0 -0.8 22 10-31 121-142 (240)
401 1qor_A Quinone oxidoreductase; 52.0 27 0.00094 31.7 6.6 89 182-283 141-239 (327)
402 3g07_A 7SK snRNA methylphospha 51.0 2.7 9.1E-05 38.3 -0.6 20 12-31 203-222 (292)
403 3mti_A RRNA methylase; SAM-dep 50.8 3.9 0.00013 33.8 0.5 18 13-30 119-136 (185)
404 3ofk_A Nodulation protein S; N 50.3 2.3 7.9E-05 36.1 -1.0 21 12-32 137-157 (216)
405 3me5_A Cytosine-specific methy 50.2 87 0.003 31.2 10.3 31 182-214 88-118 (482)
406 4gua_A Non-structural polyprot 50.2 21 0.00071 37.0 5.7 62 242-304 220-294 (670)
407 3e05_A Precorrin-6Y C5,15-meth 50.1 13 0.00046 31.1 3.8 20 12-31 125-144 (204)
408 3sso_A Methyltransferase; macr 49.4 8 0.00027 38.3 2.6 19 12-30 307-325 (419)
409 1nkv_A Hypothetical protein YJ 48.8 2.8 9.5E-05 36.5 -0.8 19 12-30 123-141 (256)
410 1xdz_A Methyltransferase GIDB; 48.7 15 0.00052 31.9 4.1 16 13-28 158-173 (240)
411 3ip1_A Alcohol dehydrogenase, 48.6 30 0.001 32.8 6.4 92 182-283 214-318 (404)
412 2gs9_A Hypothetical protein TT 48.5 2.4 8.3E-05 35.8 -1.2 22 11-32 114-135 (211)
413 3e8s_A Putative SAM dependent 48.4 2.8 9.7E-05 35.3 -0.8 20 11-30 134-153 (227)
414 3e23_A Uncharacterized protein 48.2 2.5 8.5E-05 35.8 -1.2 53 11-70 123-180 (211)
415 3k6j_A Protein F01G10.3, confi 48.0 54 0.0019 32.5 8.4 106 180-293 52-176 (460)
416 1zx0_A Guanidinoacetate N-meth 48.0 2.9 9.8E-05 36.4 -0.8 18 12-29 153-170 (236)
417 3g89_A Ribosomal RNA small sub 47.9 14 0.00049 32.8 3.9 18 13-30 168-186 (249)
418 2g5c_A Prephenate dehydrogenas 47.7 80 0.0027 27.8 8.8 102 184-296 3-111 (281)
419 1yzh_A TRNA (guanine-N(7)-)-me 47.6 7.2 0.00024 33.2 1.7 20 11-30 138-157 (214)
420 3njr_A Precorrin-6Y methylase; 47.6 8.7 0.0003 32.9 2.2 20 12-31 137-156 (204)
421 3krt_A Crotonyl COA reductase; 47.1 42 0.0014 32.3 7.3 91 181-283 228-344 (456)
422 2i62_A Nicotinamide N-methyltr 46.7 3.3 0.00011 36.0 -0.6 19 12-30 181-199 (265)
423 3swr_A DNA (cytosine-5)-methyl 46.4 2E+02 0.007 31.3 13.1 32 182-214 540-571 (1002)
424 3thr_A Glycine N-methyltransfe 46.3 2.8 9.7E-05 37.4 -1.2 20 11-30 157-176 (293)
425 2nxc_A L11 mtase, ribosomal pr 45.8 9.4 0.00032 33.9 2.2 19 13-31 202-220 (254)
426 4a0s_A Octenoyl-COA reductase/ 45.5 60 0.002 31.0 8.1 90 181-283 220-336 (447)
427 2o57_A Putative sarcosine dime 45.0 2.9 0.0001 37.4 -1.3 20 12-31 170-189 (297)
428 3f4k_A Putative methyltransfer 45.0 3.2 0.00011 36.1 -1.0 19 12-30 133-151 (257)
429 4eez_A Alcohol dehydrogenase 1 45.0 22 0.00074 32.6 4.7 90 182-283 164-263 (348)
430 1wly_A CAAR, 2-haloacrylate re 44.7 22 0.00074 32.6 4.6 89 182-283 146-244 (333)
431 3tqh_A Quinone oxidoreductase; 44.5 35 0.0012 31.0 6.0 90 182-284 153-246 (321)
432 4dzr_A Protein-(glutamine-N5) 44.5 22 0.00074 29.3 4.2 20 11-30 146-166 (215)
433 2fca_A TRNA (guanine-N(7)-)-me 44.2 8.6 0.00029 33.1 1.7 20 11-30 135-154 (213)
434 3gaz_A Alcohol dehydrogenase s 44.2 33 0.0011 31.6 5.8 89 181-283 150-246 (343)
435 2cvz_A Dehydrogenase, 3-hydrox 43.9 49 0.0017 29.1 6.8 98 184-296 3-105 (289)
436 2oo3_A Protein involved in cat 43.5 37 0.0013 31.7 6.0 95 183-283 93-198 (283)
437 1vl5_A Unknown conserved prote 43.4 3.2 0.00011 36.4 -1.3 20 11-30 122-141 (260)
438 2kw5_A SLR1183 protein; struct 43.1 4.5 0.00015 33.8 -0.3 19 12-30 114-132 (202)
439 3kkz_A Uncharacterized protein 43.1 4.1 0.00014 35.9 -0.6 19 12-30 133-151 (267)
440 1l3i_A Precorrin-6Y methyltran 43.1 15 0.00051 29.7 2.9 20 12-31 117-136 (192)
441 2p35_A Trans-aconitate 2-methy 43.1 4.1 0.00014 35.4 -0.6 20 11-30 114-133 (259)
442 1xtp_A LMAJ004091AAA; SGPP, st 42.8 3.7 0.00013 35.5 -0.9 20 11-30 179-198 (254)
443 2pxx_A Uncharacterized protein 42.8 3.7 0.00013 34.3 -0.9 22 10-31 140-161 (215)
444 2dq4_A L-threonine 3-dehydroge 42.7 6.4 0.00022 36.4 0.7 88 181-283 164-262 (343)
445 3ujc_A Phosphoethanolamine N-m 42.6 3.3 0.00011 35.9 -1.3 20 11-30 141-160 (266)
446 3dxy_A TRNA (guanine-N(7)-)-me 42.6 3.2 0.00011 36.3 -1.3 22 11-32 132-153 (218)
447 3h2b_A SAM-dependent methyltra 42.5 4 0.00014 34.2 -0.8 54 11-71 123-181 (203)
448 3dtn_A Putative methyltransfer 42.4 3.8 0.00013 35.1 -0.9 20 11-30 130-149 (234)
449 2zb4_A Prostaglandin reductase 42.4 20 0.00068 33.2 4.0 88 183-283 162-260 (357)
450 1pjz_A Thiopurine S-methyltran 42.3 4.2 0.00014 34.8 -0.6 17 11-27 122-138 (203)
451 1p91_A Ribosomal RNA large sub 42.3 3.4 0.00012 36.4 -1.3 20 12-31 161-180 (269)
452 2ift_A Putative methylase HI07 41.5 6.3 0.00022 33.6 0.4 17 16-32 150-166 (201)
453 1ri5_A MRNA capping enzyme; me 41.4 3.7 0.00013 36.3 -1.2 21 11-31 156-176 (298)
454 2j8z_A Quinone oxidoreductase; 41.4 48 0.0016 30.7 6.5 89 182-283 163-261 (354)
455 3llv_A Exopolyphosphatase-rela 41.1 1E+02 0.0035 23.9 7.7 93 183-285 7-105 (141)
456 4a2c_A Galactitol-1-phosphate 41.0 20 0.00067 32.9 3.7 91 182-283 161-260 (346)
457 3dlc_A Putative S-adenosyl-L-m 40.8 4.2 0.00014 34.0 -0.9 20 11-30 130-149 (219)
458 3bgv_A MRNA CAP guanine-N7 met 40.6 4.1 0.00014 37.0 -1.0 22 10-31 136-157 (313)
459 4e12_A Diketoreductase; oxidor 40.5 56 0.0019 29.3 6.6 92 182-281 4-119 (283)
460 1lss_A TRK system potassium up 40.3 1.1E+02 0.0038 23.1 7.7 100 183-291 5-111 (140)
461 3ccf_A Cyclopropane-fatty-acyl 40.3 3.8 0.00013 36.5 -1.3 20 11-30 136-155 (279)
462 2qe6_A Uncharacterized protein 40.0 5.6 0.00019 36.1 -0.2 21 11-31 178-198 (274)
463 2py6_A Methyltransferase FKBM; 40.0 27 0.00092 33.7 4.7 42 181-222 226-272 (409)
464 1zkd_A DUF185; NESG, RPR58, st 39.8 32 0.0011 33.4 5.2 76 182-257 81-163 (387)
465 1kpg_A CFA synthase;, cyclopro 39.4 5.1 0.00017 35.6 -0.6 21 11-31 150-170 (287)
466 3cc8_A Putative methyltransfer 39.2 5.2 0.00018 33.7 -0.5 20 12-31 113-132 (230)
467 3g5l_A Putative S-adenosylmeth 39.2 4 0.00014 35.5 -1.3 19 12-30 128-146 (253)
468 2p8j_A S-adenosylmethionine-de 39.1 4.6 0.00016 33.8 -0.9 19 12-30 111-129 (209)
469 1zcj_A Peroxisomal bifunctiona 39.0 86 0.0029 30.6 8.2 105 181-293 36-160 (463)
470 3sm3_A SAM-dependent methyltra 39.0 4.5 0.00015 34.3 -1.0 22 11-32 123-144 (235)
471 3hm2_A Precorrin-6Y C5,15-meth 38.7 6.3 0.00022 31.9 -0.1 21 11-31 109-129 (178)
472 3hem_A Cyclopropane-fatty-acyl 38.5 5.7 0.0002 35.8 -0.4 22 10-31 164-185 (302)
473 3pfg_A N-methyltransferase; N, 38.2 5.1 0.00018 35.1 -0.8 18 11-28 133-150 (263)
474 1eg2_A Modification methylase 38.1 21 0.0007 33.5 3.4 40 182-224 243-286 (319)
475 3tos_A CALS11; methyltransfera 38.1 14 0.00047 34.0 2.1 57 240-301 178-240 (257)
476 3dou_A Ribosomal RNA large sub 37.9 7.3 0.00025 33.3 0.2 15 14-28 124-138 (191)
477 1dus_A MJ0882; hypothetical pr 37.7 23 0.0008 28.5 3.3 22 11-32 139-160 (194)
478 4htf_A S-adenosylmethionine-de 37.6 4.7 0.00016 35.9 -1.2 20 11-30 155-174 (285)
479 2ex4_A Adrenal gland protein A 37.3 4.5 0.00015 35.1 -1.3 53 11-70 167-223 (241)
480 2avn_A Ubiquinone/menaquinone 36.9 4.6 0.00016 35.6 -1.3 21 12-32 135-155 (260)
481 3hwr_A 2-dehydropantoate 2-red 36.8 1.1E+02 0.0038 27.9 8.2 105 182-295 19-133 (318)
482 1xxl_A YCGJ protein; structura 36.7 5.3 0.00018 34.7 -0.9 20 11-30 106-125 (239)
483 3bus_A REBM, methyltransferase 36.1 5.3 0.00018 35.1 -1.0 20 11-30 148-167 (273)
484 3l8d_A Methyltransferase; stru 36.0 5.5 0.00019 34.1 -0.9 19 11-29 135-153 (242)
485 1y8c_A S-adenosylmethionine-de 35.9 5.3 0.00018 34.0 -1.0 21 11-31 124-144 (246)
486 4df3_A Fibrillarin-like rRNA/T 35.9 5.6 0.00019 36.0 -0.9 18 11-28 164-181 (233)
487 3bkw_A MLL3908 protein, S-aden 35.9 4.9 0.00017 34.4 -1.3 19 12-30 127-145 (243)
488 1gu7_A Enoyl-[acyl-carrier-pro 35.8 51 0.0017 30.4 5.7 91 183-283 169-275 (364)
489 1i9g_A Hypothetical protein RV 35.6 13 0.00043 32.8 1.4 21 12-32 186-206 (280)
490 2gb4_A Thiopurine S-methyltran 35.6 5.7 0.0002 35.7 -0.9 16 12-27 174-189 (252)
491 4dup_A Quinone oxidoreductase; 35.4 27 0.00092 32.4 3.7 89 181-283 167-265 (353)
492 2fhp_A Methylase, putative; al 35.1 9.1 0.00031 31.2 0.3 16 16-31 141-156 (187)
493 3qha_A Putative oxidoreductase 34.9 34 0.0012 31.0 4.2 99 183-295 16-119 (296)
494 1mv8_A GMD, GDP-mannose 6-dehy 34.9 1.4E+02 0.0046 28.7 8.8 103 184-295 2-138 (436)
495 3g2m_A PCZA361.24; SAM-depende 34.8 6 0.00021 35.6 -0.9 21 11-31 172-192 (299)
496 2yqz_A Hypothetical protein TT 34.7 6 0.00021 34.3 -0.9 18 11-28 123-140 (263)
497 3mgg_A Methyltransferase; NYSG 34.3 5.4 0.00018 35.2 -1.3 20 11-30 124-143 (276)
498 3ou2_A SAM-dependent methyltra 34.1 6.1 0.00021 33.1 -0.9 20 11-30 128-147 (218)
499 1vlm_A SAM-dependent methyltra 33.9 5.7 0.0002 33.9 -1.2 21 11-31 121-141 (219)
500 3l9w_A Glutathione-regulated p 33.7 1.1E+02 0.0036 29.6 7.8 93 184-285 6-104 (413)
No 1
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.55 E-value=5e-15 Score=132.92 Aligned_cols=99 Identities=11% Similarity=0.158 Sum_probs=79.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCC-CccceeEehhhhcccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~~~ 259 (332)
..+|||+|||+|.++.+|++.+. +|+++|. +.+++.+.++ +.-...|..+...+++ ++||+|+|+.+|+|+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~-~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~- 116 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK-FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP- 116 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT-SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG-
T ss_pred CCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh-cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc-
Confidence 57899999999999999998876 5688888 8999999887 2111122212223678 99999999999999974
Q ss_pred CCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 260 CDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 260 c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
.++..+|.++.|+|||||++++..+.
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 46789999999999999999998754
No 2
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=2.6e-14 Score=124.38 Aligned_cols=133 Identities=6% Similarity=-0.029 Sum_probs=99.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-cc-ccccccccCCCCC-CccceeEehhhhcccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-IG-TYHDWCEAFSTYP-RTYDLLHLDGLFTAES 257 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-ig-~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~ 257 (332)
..+|||+|||+|.++..|++.+. .++++|. +.+++.+.++.- +. ...|. +. .+++ ++||+|+|+.+|+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~-~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTI-TD-LSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCG-GG-GGGSCCCEEEEEEESSSTTCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcc-cc-cccCCCCeEEEEehhhHhcCC
Confidence 45799999999999999999876 5788888 889999988732 11 11221 12 2466 9999999999999997
Q ss_pred ccCCHHHHHHHHHhhhcCCcEEEEEcChh----------------HHHHHHHHHhcCcceeeecccccccccceEEEEEe
Q 020011 258 HRCDMKFVLLEMDRILRPNGYVIVRESSY----------------FIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQK 321 (332)
Q Consensus 258 ~~c~~~~iL~EmdRVLRPGG~lii~d~~~----------------~~~~i~~i~~~l~W~~~~~~~e~~~~~e~~li~~K 321 (332)
..+...+|.++.|+|||||.+++..... ..+.+.++++...+++.......+ .+...++..|
T Consensus 117 -~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~-~p~~~l~~~~ 194 (203)
T 3h2b_A 117 -PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR-FPHAYLTAEA 194 (203)
T ss_dssp -TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT-SSEEEEEEEE
T ss_pred -HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC-Ccchhhhhhh
Confidence 3578999999999999999999987431 257788888888888766544433 2333444333
No 3
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.52 E-value=7.3e-15 Score=136.44 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=74.1
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCC-CccceeEehhhhcccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~~~ 259 (332)
-.+|||+|||+|.++..|++++. +|+++|. +.|++.|.++.-+-..+.-.+. .++| ++||+|+|..+|||+
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~-~~~~~~sfD~v~~~~~~h~~--- 112 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRHPRVTYAVAPAED-TGLPPASVDVAIAAQAMHWF--- 112 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCCTTEEEEECCTTC-CCCCSSCEEEEEECSCCTTC---
T ss_pred CCCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhcCCceeehhhhhh-hcccCCcccEEEEeeehhHh---
Confidence 35799999999999999999876 5788888 8899887655322222211222 4688 999999999999876
Q ss_pred CCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 260 CDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 260 c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+.+.++.|+.|+|||||.|++..
T Consensus 113 -~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 113 -DLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -hHHHHHHHHHHHcCCCCEEEEEE
Confidence 35789999999999999998865
No 4
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.52 E-value=8.7e-14 Score=122.67 Aligned_cols=137 Identities=11% Similarity=0.110 Sum_probs=95.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC----c-------cc-ccccccccCCCCC-Ccccee
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG----L-------IG-TYHDWCEAFSTYP-RTYDLL 247 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG----l-------ig-~~~d~~e~~~~yp-~sFDlV 247 (332)
..+|||+|||+|.++.+|++.+.. .+++++|. +.+++.+.++- + +- ...|. ...+++ ++||+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~~~~~~~~~fD~V 106 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSF-EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL--VYRDKRFSGYDAA 106 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTC-CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS--SSCCGGGTTCSEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc--cccccccCCCCEE
Confidence 568999999999999999987521 26788888 88998887762 1 11 11121 123445 899999
Q ss_pred EehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChhH----------------------HHHHH----HHHhcCcce
Q 020011 248 HLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSYF----------------------IDAVA----TIAKGMKWS 301 (332)
Q Consensus 248 h~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~~----------------------~~~i~----~i~~~l~W~ 301 (332)
.|+.+|+|+++ .+...++.++.|+|||||++++....+. .+.++ .+++.--++
T Consensus 107 ~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~ 185 (219)
T 3jwg_A 107 TVIEVIEHLDE-NRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYS 185 (219)
T ss_dssp EEESCGGGCCH-HHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEE
T ss_pred EEHHHHHhCCH-HHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcE
Confidence 99999999964 3457899999999999998877654321 22333 666666666
Q ss_pred eeecc----cccccccceEEEEEec
Q 020011 302 CHKED----TEYGVEKEKLLLCQKK 322 (332)
Q Consensus 302 ~~~~~----~e~~~~~e~~li~~K~ 322 (332)
+.... .++-....+|.|++|+
T Consensus 186 v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 186 VRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp EEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred EEEEecCCccccCCCCeEEEEEecc
Confidence 65541 1122256789999986
No 5
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.51 E-value=1.9e-14 Score=127.29 Aligned_cols=96 Identities=16% Similarity=0.198 Sum_probs=76.1
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc--ccccccccccCCCCC-CccceeEehhhhcccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL--IGTYHDWCEAFSTYP-RTYDLLHLDGLFTAES 257 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl--ig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~ 257 (332)
..+|||+|||+|.++..|++.+. +|+++|. +.+++.+.++.. +-..+.-.+.+ ++ ++||+|+|+++|+|++
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~--~~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC--CCSSCEEEEEEESCGGGCS
T ss_pred CCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc--CcCCcccEEEEhhHHHhhc
Confidence 35799999999999999999875 5788888 889999988742 11111111222 45 9999999999999996
Q ss_pred ccCCHHHHHHHHH-hhhcCCcEEEEEcCh
Q 020011 258 HRCDMKFVLLEMD-RILRPNGYVIVRESS 285 (332)
Q Consensus 258 ~~c~~~~iL~Emd-RVLRPGG~lii~d~~ 285 (332)
+ ...+|.|+. |+|||||++++.++.
T Consensus 118 ~---~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 118 D---PVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp S---HHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred C---HHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 4 579999999 999999999998854
No 6
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.51 E-value=1.2e-13 Score=122.46 Aligned_cols=97 Identities=15% Similarity=0.120 Sum_probs=75.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc-cccc-ccccccCCCCCCccceeEehh-hh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL-IGTY-HDWCEAFSTYPRTYDLLHLDG-LF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl-ig~~-~d~~e~~~~yp~sFDlVh~s~-vf 253 (332)
..+|||+|||+|.++..|++.+. +++++|. +.+++.+.++ ++ +... .|. .. .+++++||+|+|+. +|
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~-~~~~~~fD~v~~~~~~l 112 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDI-SN-LNINRKFDLITCCLDST 112 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCG-GG-CCCSCCEEEEEECTTGG
T ss_pred CCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEeccc-cc-CCccCCceEEEEcCccc
Confidence 56899999999999999999875 5788888 8888888766 21 1111 111 11 23458999999998 99
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+|+++..+...+|.++.|+|||||.+++..
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999654567899999999999999999853
No 7
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.51 E-value=8.3e-14 Score=127.90 Aligned_cols=105 Identities=15% Similarity=0.182 Sum_probs=79.3
Q ss_pred CCCCCCCeEEEecCcchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCCCccceeEeh
Q 020011 177 LGTDKIRNVMDMNTLYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYPRTYDLLHLD 250 (332)
Q Consensus 177 l~~~~~r~VLD~GCG~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp~sFDlVh~s 250 (332)
+......+|||+|||+|.++.+|++ .+. .|+++|. +++++.+.++ |+...+.-.+..+..+|++||+|+|.
T Consensus 60 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~ 136 (287)
T 1kpg_A 60 LGLQPGMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSI 136 (287)
T ss_dssp TTCCTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEE
T ss_pred cCCCCcCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEe
Confidence 3333467899999999999999984 455 6788888 8888888776 33221111112233456999999999
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
.+|+|+++ .+...+|.|+.|+|||||.+++.+..
T Consensus 137 ~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 137 GAFEHFGH-ERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp SCGGGTCT-TTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CchhhcCh-HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 99999963 46889999999999999999998743
No 8
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.50 E-value=9.3e-14 Score=121.34 Aligned_cols=134 Identities=13% Similarity=0.107 Sum_probs=95.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccC--CC-CC-CccceeEehhhhccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAF--ST-YP-RTYDLLHLDGLFTAE 256 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~--~~-yp-~sFDlVh~s~vf~h~ 256 (332)
..+|||+|||+|.++.+|++.+. .++++|. +.+++.+.+++.+.....-.+.+ .+ .+ .+||+|+|+.+|+ .
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~ 128 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H 128 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-h
Confidence 47899999999999999999876 6788888 89999999885433222111122 13 34 5699999999998 3
Q ss_pred cccCCHHHHHHHHHhhhcCCcEEEEEcChh--------------------------------HHHHHHHHHhcCcceeee
Q 020011 257 SHRCDMKFVLLEMDRILRPNGYVIVRESSY--------------------------------FIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 257 ~~~c~~~~iL~EmdRVLRPGG~lii~d~~~--------------------------------~~~~i~~i~~~l~W~~~~ 304 (332)
.+...+|.++.|+|||||++++.+... ..+.+.++++.--+++..
T Consensus 129 ---~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 129 ---QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp ---SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred ---hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 356799999999999999999987521 357778888877777654
Q ss_pred ccccccc----ccceEEEEEec
Q 020011 305 EDTEYGV----EKEKLLLCQKK 322 (332)
Q Consensus 305 ~~~e~~~----~~e~~li~~K~ 322 (332)
......+ ...-+++++|+
T Consensus 206 ~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 206 LQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EECCCCTTCSSCSCEEEEEEEC
T ss_pred EecCCCCCCCCceeEEEEeecC
Confidence 3221111 23456667764
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.50 E-value=2.3e-14 Score=133.12 Aligned_cols=102 Identities=10% Similarity=0.039 Sum_probs=78.6
Q ss_pred CCeEEEecCcchHHHHHHhcCC-CeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCC-CccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDP-LWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYP-RTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~-v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp-~sFDlVh~s~vf~ 254 (332)
..+|||+|||+|.++.+|+++. .-...|+++|. +.+++.|.++ ++...+.-.+..+..+| ..||+|.|+.+|+
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~ 150 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQ 150 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCGG
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeeee
Confidence 4689999999999999998751 11226789999 9999999876 33222222234455677 8899999999999
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
|+++ .+...+|.|+.|+|||||.|++.+.
T Consensus 151 ~~~~-~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 151 FLEP-SERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp GSCH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ecCc-hhHhHHHHHHHHHcCCCcEEEEEec
Confidence 9864 3456799999999999999999874
No 10
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.50 E-value=3.5e-14 Score=124.68 Aligned_cols=103 Identities=11% Similarity=0.177 Sum_probs=78.8
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcc-cccccccccCCCC-C-CccceeEehhhhcc
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLI-GTYHDWCEAFSTY-P-RTYDLLHLDGLFTA 255 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGli-g~~~d~~e~~~~y-p-~sFDlVh~s~vf~h 255 (332)
....+|||+|||+|.++..|++.+ .+++++|. +.+++.+.++.-. +.+.-.+..+..+ + ++||+|+|+.+|+|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYY 126 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHh
Confidence 346789999999999999999875 37889999 8899999887421 1111111222222 4 99999999999999
Q ss_pred ccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 256 ESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 256 ~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+++...+..+|.++.|+|||||.+++..+.
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 986555578899999999999999997644
No 11
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.50 E-value=3.2e-14 Score=124.08 Aligned_cols=99 Identities=14% Similarity=0.136 Sum_probs=78.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCC-CccceeEehhhhcccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~~~ 259 (332)
..+|||+|||+|.++..|++.+. .++++|. +.+++.+.++|+......-+.....++ ++||+|+|+.+|+|+++
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~- 122 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVPD- 122 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSCH-
T ss_pred CCeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCCH-
Confidence 45899999999999999998865 6788888 889999988764221111111222356 99999999999999974
Q ss_pred CCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 260 CDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 260 c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
..+..+|.++.|+|||||.+++.+.
T Consensus 123 ~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 123 DRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 3457899999999999999999875
No 12
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.50 E-value=1e-13 Score=117.40 Aligned_cols=135 Identities=14% Similarity=0.105 Sum_probs=97.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCC-CccceeEehhhhcccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~~~ 259 (332)
..+|||+|||+|.++..|++.+. +++++|. +.+++.+.++.- . +.-.+.. .+++ ++||+|+|+.+|+|++
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~-~-v~~~~~d-~~~~~~~~D~v~~~~~l~~~~-- 89 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEKFD-S-VITLSDP-KEIPDNSVDFILFANSFHDMD-- 89 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHHCT-T-SEEESSG-GGSCTTCEEEEEEESCSTTCS--
T ss_pred CCeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHhCC-C-cEEEeCC-CCCCCCceEEEEEccchhccc--
Confidence 56899999999999999999862 7889998 889999988721 1 1111122 5677 8999999999999985
Q ss_pred CCHHHHHHHHHhhhcCCcEEEEEcChh-------------HHHHHHHHHhcCcceeeecccccccccceEEEEEeccCCC
Q 020011 260 CDMKFVLLEMDRILRPNGYVIVRESSY-------------FIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQKKLWYS 326 (332)
Q Consensus 260 c~~~~iL~EmdRVLRPGG~lii~d~~~-------------~~~~i~~i~~~l~W~~~~~~~e~~~~~e~~li~~K~~w~~ 326 (332)
+...++.++.|+|||||.+++.+... ..+.++++++ .++..... +-....-.+++.|+-=++
T Consensus 90 -~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~--~~~~~~~~l~~~~~~~~~ 164 (170)
T 3i9f_A 90 -DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF--NPTPYHFGLVLKRKTSEG 164 (170)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE--CSSTTEEEEEEEECCCCS
T ss_pred -CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc--CCCCceEEEEEecCCCCc
Confidence 47899999999999999999987421 1456666666 56554332 122235677777765555
Q ss_pred CCC
Q 020011 327 SNQ 329 (332)
Q Consensus 327 ~~~ 329 (332)
.++
T Consensus 165 ~~~ 167 (170)
T 3i9f_A 165 HHH 167 (170)
T ss_dssp CCC
T ss_pred ccc
Confidence 443
No 13
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.49 E-value=8.6e-14 Score=129.36 Aligned_cols=102 Identities=10% Similarity=0.096 Sum_probs=79.1
Q ss_pred CCCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCCCccceeEehhhh
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYPRTYDLLHLDGLF 253 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp~sFDlVh~s~vf 253 (332)
....+|||+|||+|.++..|++. +. .|+++|. +.+++.+.++ |+...+.-.+..+..++++||+|+|..+|
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~~ 147 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAF 147 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCG
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEEEcchH
Confidence 34678999999999999999987 64 6788888 8888888776 44321211122223347999999999999
Q ss_pred cccccc------CCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 254 TAESHR------CDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 254 ~h~~~~------c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+|++++ .+...+|.++.|+|||||.+++.+.
T Consensus 148 ~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 148 EHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp GGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred HhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 999654 4567899999999999999999874
No 14
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.49 E-value=7.7e-14 Score=122.32 Aligned_cols=118 Identities=15% Similarity=0.105 Sum_probs=89.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc-CcccccccccccCCCCCCccceeEehhhhcccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR-GLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR-Glig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~~ 259 (332)
..+|||+|||+|.++..|++.+. .++++|. +.+++.+.++ ++.....|. +.+ +.+++||+|+|+.+|+|++ .
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~-~~~-~~~~~fD~v~~~~~l~~~~-~ 117 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLF-HQL-DAIDAYDAVWAHACLLHVP-R 117 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCG-GGC-CCCSCEEEEEECSCGGGSC-H
T ss_pred CCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeee-ccC-CCCCcEEEEEecCchhhcC-H
Confidence 56899999999999999999876 6788888 8899998887 432222222 222 2339999999999999987 2
Q ss_pred CCHHHHHHHHHhhhcCCcEEEEEcChh---------------HHHHHHHHHhcCc-ceeeec
Q 020011 260 CDMKFVLLEMDRILRPNGYVIVRESSY---------------FIDAVATIAKGMK-WSCHKE 305 (332)
Q Consensus 260 c~~~~iL~EmdRVLRPGG~lii~d~~~---------------~~~~i~~i~~~l~-W~~~~~ 305 (332)
.+...+|.++.|+|||||++++..+.. ..+.+..+++.-- +++...
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 457789999999999999999986431 3567777777666 765543
No 15
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.49 E-value=2.9e-14 Score=138.67 Aligned_cols=145 Identities=10% Similarity=0.062 Sum_probs=105.7
Q ss_pred ccccchhhHHHHHHHHHh-hcCCCCCCCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCccccccc
Q 020011 155 AFKHDDSKWNVRVKHYKK-LLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHD 232 (332)
Q Consensus 155 ~F~~d~~~W~~~v~~y~~-~l~~l~~~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d 232 (332)
.|...+..|......+.. ++..+......+|||+|||+|.++..|++++. +++++|. +++++.+.++|+......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 80 YHSSGSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDF 156 (416)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSC
T ss_pred CcCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceee
Confidence 344556677777666554 33334434467899999999999999999876 6789999 999999999976432211
Q ss_pred ccc---cCCCCC-CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChh--------------------HH
Q 020011 233 WCE---AFSTYP-RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY--------------------FI 288 (332)
Q Consensus 233 ~~e---~~~~yp-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~--------------------~~ 288 (332)
... ...+++ ++||+|+|.++|+|++ ++..+|.|+.|+|||||++++..+.. ..
T Consensus 157 ~~~~~~~~l~~~~~~fD~I~~~~vl~h~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~ 233 (416)
T 4e2x_A 157 FEKATADDVRRTEGPANVIYAANTLCHIP---YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSA 233 (416)
T ss_dssp CSHHHHHHHHHHHCCEEEEEEESCGGGCT---THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCH
T ss_pred echhhHhhcccCCCCEEEEEECChHHhcC---CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCH
Confidence 111 112466 9999999999999996 57899999999999999999986531 13
Q ss_pred HHHHHHHhcCcceeeec
Q 020011 289 DAVATIAKGMKWSCHKE 305 (332)
Q Consensus 289 ~~i~~i~~~l~W~~~~~ 305 (332)
+.++.++++-.+++...
T Consensus 234 ~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 234 TSVQGMAQRCGFELVDV 250 (416)
T ss_dssp HHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHcCCEEEEE
Confidence 46677777666665433
No 16
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.49 E-value=1.3e-13 Score=124.97 Aligned_cols=96 Identities=16% Similarity=0.106 Sum_probs=76.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-ccc-cccccccCCCCCCccceeEehh-hhcccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-IGT-YHDWCEAFSTYPRTYDLLHLDG-LFTAES 257 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-ig~-~~d~~e~~~~yp~sFDlVh~s~-vf~h~~ 257 (332)
..+|||+|||+|.++..|++.+. +|+++|. +.+++.+.++.. +.. ..|. +. .+++++||+|+|+. +|+|++
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~-~~~~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDM-RD-FSLGRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCT-TT-CCCSCCEEEEEECTTGGGGSC
T ss_pred CCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECCh-HH-CCccCCcCEEEEcCchhhhcC
Confidence 46899999999999999999875 6788898 899999988732 111 1111 11 22359999999998 999997
Q ss_pred ccCCHHHHHHHHHhhhcCCcEEEEE
Q 020011 258 HRCDMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 258 ~~c~~~~iL~EmdRVLRPGG~lii~ 282 (332)
+..+...+|.++.|+|||||.|++.
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5556778999999999999999995
No 17
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.48 E-value=1e-13 Score=119.19 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=85.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc---ccccccccCCCCCCccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG---TYHDWCEAFSTYPRTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~~d~~e~~~~yp~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++..|++.+. +++++|. +.+++.+.++ ++.. ...|.. .+ +++++||+|+|+.+|
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~-~~~~~~D~v~~~~~l 107 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLN-NL-TFDRQYDFILSTVVL 107 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGG-GC-CCCCCEEEEEEESCG
T ss_pred CCeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchh-hC-CCCCCceEEEEcchh
Confidence 46999999999999999999865 6778888 7788777654 3311 111211 12 236899999999999
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcCh--------------hHHHHHHHHHhcCcceeeecc
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESS--------------YFIDAVATIAKGMKWSCHKED 306 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~--------------~~~~~i~~i~~~l~W~~~~~~ 306 (332)
+|++ ..+...++.++.|+|||||.+++.+.. -..++++++... |++....
T Consensus 108 ~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 108 MFLE-AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp GGSC-GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hhCC-HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 9986 346789999999999999998876521 124566777666 7776543
No 18
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.48 E-value=1.3e-14 Score=127.50 Aligned_cols=97 Identities=10% Similarity=0.165 Sum_probs=75.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc--cccc-ccccccCCCCCCccceeEehhhhcccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL--IGTY-HDWCEAFSTYPRTYDLLHLDGLFTAES 257 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl--ig~~-~d~~e~~~~yp~sFDlVh~s~vf~h~~ 257 (332)
..+|||+|||+|.++..|++++. +++++|. +.+++.+.++.- +-.+ .|. +. .+++++||+|+|+.+|+|++
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~-~~-~~~~~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITEGDF-LS-FEVPTSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEESCCS-SS-CCCCSCCSEEEEESCGGGSC
T ss_pred CCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEeCCh-hh-cCCCCCeEEEEECcchhcCC
Confidence 56899999999999999999865 6788998 889999988733 1111 111 11 23448999999999999997
Q ss_pred ccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 258 HRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 258 ~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+. ....+|.|+.|+|||||.+++.++
T Consensus 121 ~~-~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 121 DD-EKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp HH-HHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hH-HHHHHHHHHHHhcCCCCEEEEEec
Confidence 52 233499999999999999999873
No 19
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.48 E-value=4.9e-14 Score=127.67 Aligned_cols=95 Identities=18% Similarity=0.116 Sum_probs=76.0
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--c-cccccccCCCCC-CccceeEehh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--T-YHDWCEAFSTYP-RTYDLLHLDG 251 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~-~~d~~e~~~~yp-~sFDlVh~s~ 251 (332)
...+|||+|||+|.++..|++++. .|+++|. +.+++.+.++ |+.. . ..|. +. .+|+ ++||+|+|+.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~-l~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA-EQ-MPFTDERFHIVTCRI 111 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--C-CCSCTTCEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH-Hh-CCCCCCCEEEEEEhh
Confidence 367899999999999999998764 6788888 8888887765 3321 1 1121 11 3677 9999999999
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+|+|++ +...+|.|+.|+|||||+|++.+
T Consensus 112 ~l~~~~---d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 112 AAHHFP---NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhHhcC---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 999996 46799999999999999999975
No 20
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.48 E-value=7.6e-14 Score=125.30 Aligned_cols=102 Identities=15% Similarity=0.201 Sum_probs=79.9
Q ss_pred CCCCCCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhcCcc----c-ccccccccCCCCC-CccceeE
Q 020011 177 LGTDKIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDRGLI----G-TYHDWCEAFSTYP-RTYDLLH 248 (332)
Q Consensus 177 l~~~~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eRGli----g-~~~d~~e~~~~yp-~sFDlVh 248 (332)
+......+|||+|||+|.++.+|++. +. .|+++|. +.+++.+.++.-. - ...|.. . .+++ ++||+|+
T Consensus 51 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~-~~~~~~~fD~v~ 125 (266)
T 3ujc_A 51 IELNENSKVLDIGSGLGGGCMYINEKYGA---HTHGIDICSNIVNMANERVSGNNKIIFEANDIL-T-KEFPENNFDLIY 125 (266)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTT-T-CCCCTTCEEEEE
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccc-c-CCCCCCcEEEEe
Confidence 33344678999999999999999886 54 6788888 8999999887521 1 112211 1 3677 9999999
Q ss_pred ehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 249 LDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 249 ~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
|..+|+|++. .+...+|.++.|+|||||.+++.+.
T Consensus 126 ~~~~l~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 126 SRDAILALSL-ENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp EESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCh-HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999999952 3578899999999999999999873
No 21
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.47 E-value=6.5e-14 Score=128.72 Aligned_cols=100 Identities=15% Similarity=0.265 Sum_probs=78.1
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC----ccc-------ccccccccCCC---CC-Cccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG----LIG-------TYHDWCEAFST---YP-RTYD 245 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG----lig-------~~~d~~e~~~~---yp-~sFD 245 (332)
..+|||+|||+|.++..|++.+. +|+++|. +.+++.+.++. ... ...++.+ .+ ++ ++||
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~fD 132 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT--LDKDVPAGDGFD 132 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG--HHHHSCCTTCEE
T ss_pred CCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh--CccccccCCCeE
Confidence 46899999999999999999876 6788998 88998887642 110 0111111 12 66 9999
Q ss_pred eeEeh-hhhccccc----cCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 246 LLHLD-GLFTAESH----RCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 246 lVh~s-~vf~h~~~----~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
+|+|. ++|+|+++ ..+...+|.++.|+|||||+|++..+..
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 99998 89999975 3447889999999999999999988664
No 22
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.46 E-value=2.6e-13 Score=122.13 Aligned_cols=103 Identities=11% Similarity=0.057 Sum_probs=81.0
Q ss_pred CCCCCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc---cc-ccccccccCCCCC-CccceeEeh
Q 020011 177 LGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL---IG-TYHDWCEAFSTYP-RTYDLLHLD 250 (332)
Q Consensus 177 l~~~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl---ig-~~~d~~e~~~~yp-~sFDlVh~s 250 (332)
+......+|||+|||+|.++..|++.+.. +++++|. +.+++.+.++.- +- ...|. +. .+++ ++||+|+|+
T Consensus 40 ~~~~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~-~~~~~~~fD~v~~~ 115 (253)
T 3g5l_A 40 LPDFNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-ED-IAIEPDAYNVVLSS 115 (253)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GG-CCCCTTCEEEEEEE
T ss_pred hhccCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hh-CCCCCCCeEEEEEc
Confidence 44345678999999999999999998752 5788888 889999988742 11 11111 12 3576 999999999
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
.+|+|+. +...+|.++.|+|||||.+++..+..
T Consensus 116 ~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 116 LALHYIA---SFDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp SCGGGCS---CHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hhhhhhh---hHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 9999985 57899999999999999999987654
No 23
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.45 E-value=2e-13 Score=119.45 Aligned_cols=100 Identities=14% Similarity=0.160 Sum_probs=79.7
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCC-CccceeEehhhhcccc
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTAES 257 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~ 257 (332)
....+|||+|||+|.++.+|++.+. +++++|. +.+++.+.++...-...|..+...+++ ++||+|+|+.+|+|++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~ 107 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGT---RVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF 107 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTC---EEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcC
Confidence 3467899999999999999999864 6788888 889998887653212222222225677 8999999999999986
Q ss_pred ccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 258 HRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 258 ~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+...+|.++.|+|||||++++..+.
T Consensus 108 ---~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 108 ---DPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp ---CHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred ---CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 4579999999999999999998755
No 24
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.45 E-value=2.8e-13 Score=126.60 Aligned_cols=102 Identities=13% Similarity=0.112 Sum_probs=78.9
Q ss_pred CCCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCCCccceeEehhhh
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYPRTYDLLHLDGLF 253 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp~sFDlVh~s~vf 253 (332)
....+|||+|||+|.++..|++. +. .|+++|. +.+++.+.++ |+...+.-.+..+..+|++||+|+|..+|
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l 165 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAF 165 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCG
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChH
Confidence 34678999999999999999887 65 6788888 8888888776 43221111122233456899999999999
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+|+++ .+...+|.|+.|+|||||.+++.+..
T Consensus 166 ~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 166 EHFGH-ENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp GGTCG-GGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred HhcCH-HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 99963 46789999999999999999998743
No 25
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.45 E-value=1.8e-13 Score=125.67 Aligned_cols=98 Identities=17% Similarity=0.154 Sum_probs=77.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc---ccccccccCCCCC-CccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG---TYHDWCEAFSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~~d~~e~~~~yp-~sFDlVh~s~v 252 (332)
..+|||+|||+|.++..|++.+. .++++|. +.+++.+.++ |+.. .++.-.+.+.+++ ++||+|+|+.+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 46899999999999999999866 6788888 8888888776 3311 1211112334466 99999999999
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
|+|++ +...+|.|+.|+|||||++++.+..
T Consensus 146 l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 146 LEWVA---DPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp GGGCS---CHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred hhccc---CHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 99986 4688999999999999999998854
No 26
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.44 E-value=5e-13 Score=119.21 Aligned_cols=119 Identities=15% Similarity=0.042 Sum_probs=89.1
Q ss_pred CeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc----ccccccccccCCCC-C-CccceeEehhhhcc
Q 020011 183 RNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL----IGTYHDWCEAFSTY-P-RTYDLLHLDGLFTA 255 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl----ig~~~d~~e~~~~y-p-~sFDlVh~s~vf~h 255 (332)
.+|||+|||+|.++..|++.+. .|+++|. +.+++.+.++.- ...+.-.+..+..+ + .+||+|+|+.+|+|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 4899999999999999988764 6788998 889988887632 11111111222222 3 89999999999999
Q ss_pred ccccCCHHHHHHHHHhhhcCCcEEEEEcCh-----------hHHHHHHHHHhcCcceeeec
Q 020011 256 ESHRCDMKFVLLEMDRILRPNGYVIVRESS-----------YFIDAVATIAKGMKWSCHKE 305 (332)
Q Consensus 256 ~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-----------~~~~~i~~i~~~l~W~~~~~ 305 (332)
++ ..+...+|.++.|+|||||+|++.+.. ...+.+..+++.-.|+....
T Consensus 145 ~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 145 IE-PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp SC-GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred CC-HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 97 356889999999999999999986532 12567888888877876543
No 27
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.44 E-value=2.4e-13 Score=126.21 Aligned_cols=99 Identities=13% Similarity=0.193 Sum_probs=71.0
Q ss_pred CCCeEEEecCcchHHHH----HHhcC--CCeEEEEeecCc-hhhHHHHHhc-----Ccccccccc----cccCC-----C
Q 020011 181 KIRNVMDMNTLYGGFAA----AVIDD--PLWVMNVVSSYA-ANTLAVVYDR-----GLIGTYHDW----CEAFS-----T 239 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa----~L~~~--~v~vmnv~p~d~-~~~l~~a~eR-----Glig~~~d~----~e~~~-----~ 239 (332)
...+|||+|||+|.++. .|..+ ++ .+.++++|. ++|++.+.++ ++...-..+ .+.+. +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~-~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGV-CINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTC-EEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCc-eeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 35689999999997654 33332 33 224588888 8999988876 322111111 11122 2
Q ss_pred CC-CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 240 YP-RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 240 yp-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
|+ ++||+|+|+++|+|++ ++..+|.||.|+|||||+|++..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVK---DIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGGCS---CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecC---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 66 8999999999999996 47899999999999999999865
No 28
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.44 E-value=2.3e-13 Score=121.03 Aligned_cols=96 Identities=13% Similarity=0.061 Sum_probs=76.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCccccccccccc--CCCCC-CccceeEehhhhcccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEA--FSTYP-RTYDLLHLDGLFTAES 257 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~--~~~yp-~sFDlVh~s~vf~h~~ 257 (332)
..+|||+|||+|.++.+|++.+. +++++|. +.+++.+.++.....+.-.+.. -.+++ ++||+|+|.++|+|++
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred CCeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 46899999999999999999876 6788888 8999999888421111111111 13566 9999999999999985
Q ss_pred ccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 258 HRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 258 ~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+...+|.++.|+|||||++++.+
T Consensus 131 ---~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 131 ---EPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHHhCCCeEEEEEE
Confidence 46799999999999999999987
No 29
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.44 E-value=5e-13 Score=116.09 Aligned_cols=95 Identities=14% Similarity=0.114 Sum_probs=74.1
Q ss_pred eEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccC--CCCC-CccceeEehhhhcc
Q 020011 184 NVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAF--STYP-RTYDLLHLDGLFTA 255 (332)
Q Consensus 184 ~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~--~~yp-~sFDlVh~s~vf~h 255 (332)
+|||+|||+|.++..|++++ ...++++|. +.+++.+.++ |+...+.-.+..+ .+++ ++||+|+|+.+|+|
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQS--DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHS--EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred EEEEECCCCCHHHHHHHHcC--CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 89999999999999998872 246788888 8888888776 3321111111111 3577 99999999999999
Q ss_pred ccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 256 ESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 256 ~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
++ +...+|.++.|+|||||.+++.+
T Consensus 124 ~~---~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 124 WE---DVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp CS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc---CHHHHHHHHHHhCCCCCEEEEEe
Confidence 84 57899999999999999999985
No 30
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.43 E-value=1.3e-13 Score=123.52 Aligned_cols=123 Identities=15% Similarity=0.115 Sum_probs=89.3
Q ss_pred CCCCCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc----ccc-cccccccCCCCC-CccceeEe
Q 020011 177 LGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL----IGT-YHDWCEAFSTYP-RTYDLLHL 249 (332)
Q Consensus 177 l~~~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl----ig~-~~d~~e~~~~yp-~sFDlVh~ 249 (332)
+......+|||+|||+|.++..|++.+. ..++++|. +.+++.+.++.- +-. ..|. +. .+++ ++||+|+|
T Consensus 89 l~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~-~~~~~~~fD~v~~ 164 (254)
T 1xtp_A 89 LPGHGTSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAGMPVGKFILASM-ET-ATLPPNTYDLIVI 164 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCG-GG-CCCCSSCEEEEEE
T ss_pred hcccCCCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhccCCceEEEEccH-HH-CCCCCCCeEEEEE
Confidence 3333467899999999999999988753 25678888 889999887742 111 1222 12 3567 89999999
Q ss_pred hhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChh----------------HHHHHHHHHhcCcceeee
Q 020011 250 DGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY----------------FIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 250 s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~----------------~~~~i~~i~~~l~W~~~~ 304 (332)
+.+|+|+++ .+...+|.++.|+|||||++++.++.. ..+.+.++++...++...
T Consensus 165 ~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 234 (254)
T 1xtp_A 165 QWTAIYLTD-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVK 234 (254)
T ss_dssp ESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEE
T ss_pred cchhhhCCH-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEE
Confidence 999999964 357889999999999999999988421 135666666655565543
No 31
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.43 E-value=8e-13 Score=113.53 Aligned_cols=137 Identities=15% Similarity=0.091 Sum_probs=86.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc--ccccccccccCCCCC-CccceeEeh-hh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL--IGTYHDWCEAFSTYP-RTYDLLHLD-GL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl--ig~~~d~~e~~~~yp-~sFDlVh~s-~v 252 (332)
..+|||+|||+|.++..|++++. .|+++|. +.+++.|.++ |+ +-..++-.+.+..++ ++||+|+++ ..
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLSK---KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCEEEEEcCCCCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 56899999999999999999854 6788888 8888888765 43 222222223333366 899999887 33
Q ss_pred hccc-----cccCCHHHHHHHHHhhhcCCcEEEEEcCh------hHHHHHHHHHhcCc---ceeeeccccccc-ccceEE
Q 020011 253 FTAE-----SHRCDMKFVLLEMDRILRPNGYVIVRESS------YFIDAVATIAKGMK---WSCHKEDTEYGV-EKEKLL 317 (332)
Q Consensus 253 f~h~-----~~~c~~~~iL~EmdRVLRPGG~lii~d~~------~~~~~i~~i~~~l~---W~~~~~~~e~~~-~~e~~l 317 (332)
+.+- ........++.++.|+|||||.+++.... +..+.+.+.+..+. |.+.....-+.. ....++
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 179 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFLV 179 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEEE
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeEE
Confidence 3320 01123356899999999999999987642 23345555555443 666554433332 333455
Q ss_pred EEEe
Q 020011 318 LCQK 321 (332)
Q Consensus 318 i~~K 321 (332)
+..|
T Consensus 180 ~i~~ 183 (185)
T 3mti_A 180 MLEK 183 (185)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5554
No 32
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.42 E-value=2.6e-13 Score=124.54 Aligned_cols=96 Identities=9% Similarity=0.098 Sum_probs=76.2
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC--cccccccccccCCCCCCccceeEehhhhcccc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG--LIGTYHDWCEAFSTYPRTYDLLHLDGLFTAES 257 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG--lig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~ 257 (332)
...+|||+|||+|.++..|++.+. .|+++|. +.+++.+.++. +.-...|. +. .+++++||+|+|+.+|+|++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~-~~~~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADA-RN-FRVDKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCT-TT-CCCSSCEEEEEEESCGGGCS
T ss_pred CCCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECCh-hh-CCcCCCcCEEEEcchhhhCc
Confidence 357899999999999999998665 6788888 88999998773 11111221 12 24568999999999999986
Q ss_pred ccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 258 HRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 258 ~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+...+|.|+.|+|||||++++..+
T Consensus 132 ---d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 132 ---EPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHhcCCCcEEEEEec
Confidence 477999999999999999999764
No 33
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.42 E-value=6.9e-14 Score=123.83 Aligned_cols=118 Identities=10% Similarity=0.031 Sum_probs=83.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC-c--------------ccccccccccCCCCC----
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG-L--------------IGTYHDWCEAFSTYP---- 241 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG-l--------------ig~~~d~~e~~~~yp---- 241 (332)
..+|||+|||+|.++.+|++++. +|+++|. +.+++.|.++. . ...+.-.+..+..+|
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 46899999999999999999875 6789999 99999998772 1 011111122222233
Q ss_pred CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEE--EEEcCh----------hHHHHHHHHHhcCcceeee
Q 020011 242 RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYV--IVRESS----------YFIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 242 ~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~l--ii~d~~----------~~~~~i~~i~~~l~W~~~~ 304 (332)
++||+|.+..+|+|++. .+...++.||.|+|||||.+ +..+.. -..++++.+... .|++..
T Consensus 100 ~~fD~v~~~~~l~~l~~-~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~ 172 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPA-DMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTK 172 (203)
T ss_dssp HSEEEEEEESCGGGSCH-HHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEE
T ss_pred CCEEEEEECcchhhCCH-HHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEE
Confidence 68999999999999863 34567999999999999983 332211 024667777776 676543
No 34
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.42 E-value=2.2e-13 Score=122.30 Aligned_cols=97 Identities=13% Similarity=0.069 Sum_probs=73.3
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----CcccccccccccC--CCCCCccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAF--STYPRTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~--~~yp~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++.+|++. +. +++++|. +.+++.+.++ |+...+.-.+..+ .+++++||+|+|..++
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~V~~~~~~ 113 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGAT 113 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEEESCG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCCCCEEEECCCh
Confidence 568999999999999999875 44 5678888 8888877665 4321111111111 1235899999999999
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+|+++ ...+|.|+.|+|||||++++.++
T Consensus 114 ~~~~~---~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 114 WIAGG---FAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp GGTSS---SHHHHHHHTTSEEEEEEEEEEEE
T ss_pred HhcCC---HHHHHHHHHHHcCCCeEEEEecC
Confidence 99863 57899999999999999999874
No 35
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.42 E-value=3.4e-13 Score=121.31 Aligned_cols=97 Identities=18% Similarity=0.222 Sum_probs=75.8
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--ccccccccCCCCC-CccceeEehhh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TYHDWCEAFSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~~d~~e~~~~yp-~sFDlVh~s~v 252 (332)
...+|||+|||+|.++..|++.+. .++++|. +.+++.+.++ |+.. ....-.+. .+++ ++||+|+|+.+
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES-LPFPDDSFDIITCRYA 96 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB-CCSCTTCEEEEEEESC
T ss_pred CCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccccc-CCCCCCcEEEEEECCc
Confidence 367899999999999999998865 6788888 8888877665 3321 11111122 3577 89999999999
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
++|++ +...+|.|+.|+|||||++++.+.
T Consensus 97 l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 97 AHHFS---DVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp GGGCS---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcc---CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 99986 478999999999999999999763
No 36
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.41 E-value=2.6e-13 Score=119.68 Aligned_cols=103 Identities=12% Similarity=0.128 Sum_probs=76.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC----ccc----cccccccc--CCCCC-CccceeEe
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG----LIG----TYHDWCEA--FSTYP-RTYDLLHL 249 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG----lig----~~~d~~e~--~~~yp-~sFDlVh~ 249 (332)
..+|||+|||+|.++.+|++++.. .+++++|. +.+++.+.++- +.. .+.-.+.. ..+++ ++||+|+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFF-EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTC-SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCC-CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 468999999999999999987521 26788888 88998887761 110 11111111 23445 79999999
Q ss_pred hhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 250 DGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 250 s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
+.+|+|+++ .++..+|.++.|+|||||.+++....+
T Consensus 109 ~~~l~~~~~-~~~~~~l~~~~~~LkpgG~li~~~~~~ 144 (217)
T 3jwh_A 109 IEVIEHLDL-SRLGAFERVLFEFAQPKIVIVTTPNIE 144 (217)
T ss_dssp ESCGGGCCH-HHHHHHHHHHHTTTCCSEEEEEEEBHH
T ss_pred HHHHHcCCH-HHHHHHHHHHHHHcCCCEEEEEccCcc
Confidence 999999964 356789999999999999888877653
No 37
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.41 E-value=3e-13 Score=118.75 Aligned_cols=134 Identities=15% Similarity=0.073 Sum_probs=95.3
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--cc-ccccccCCCCC-CccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TY-HDWCEAFSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~-~d~~e~~~~yp-~sFDlVh~s~v 252 (332)
..+|||+|||+|.++.+|++...-...++++|. +.+++.+.++ |+.. .. .|. +. .+++ ++||+|+++.+
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~-~~~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NK-IPLPDNTVDFIFMAFT 115 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TB-CSSCSSCEEEEEEESC
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-cc-CCCCCCCeeEEEeehh
Confidence 568999999999999999886400125778888 8888887766 3221 11 111 11 2466 89999999999
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-------------hHHHHHHHHHhcCcceeeecccccccccceEEEE
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRESS-------------YFIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLC 319 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-------------~~~~~i~~i~~~l~W~~~~~~~e~~~~~e~~li~ 319 (332)
|+|++ +...+|.++.|+|||||.+++.+.. ...+.+..+++...++......- .....++++
T Consensus 116 l~~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~--~~~~~~~~~ 190 (219)
T 3dh0_A 116 FHELS---EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEV--GKYCFGVYA 190 (219)
T ss_dssp GGGCS---SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEE--TTTEEEEEE
T ss_pred hhhcC---CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEee--CCceEEEEE
Confidence 99985 4689999999999999999998632 12567788888878876543211 124567777
Q ss_pred Eec
Q 020011 320 QKK 322 (332)
Q Consensus 320 ~K~ 322 (332)
+|+
T Consensus 191 ~k~ 193 (219)
T 3dh0_A 191 MIV 193 (219)
T ss_dssp ECC
T ss_pred Eec
Confidence 775
No 38
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.41 E-value=5.6e-13 Score=122.92 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=75.7
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Cccccccccccc--CCCCC-CccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEA--FSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~--~~~yp-~sFDlVh~s~v 252 (332)
..+|||+|||+|.++..|++. +. .++++|. +.+++.+.++ |+...++-.+.. -.+|+ ++||+|+|..+
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecch
Confidence 578999999999999999886 54 6788888 8888887765 332111111111 13577 89999999999
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
|+|+++ ...+|.|+.|+|||||.|++.++
T Consensus 160 l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 160 FLHSPD---KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp GGGCSC---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcCC---HHHHHHHHHHHcCCCeEEEEEEe
Confidence 999974 78999999999999999999874
No 39
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.41 E-value=4.2e-13 Score=122.12 Aligned_cols=100 Identities=17% Similarity=0.277 Sum_probs=78.3
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCC-CccceeEehhhhccccc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTAESH 258 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~~ 258 (332)
...+|||+|||+|.++..|++.+. +++++|. +.+++.+.++........-.+. .+++ ++||+|.|..++.|+.+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~~~~~~~ 129 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKAED-LPFPSGAFEAVLALGDVLSYVE 129 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCTTS-CCSCTTCEEEEEECSSHHHHCS
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcHHH-CCCCCCCEEEEEEcchhhhccc
Confidence 356899999999999999999875 6788888 8999999888541111110111 3576 89999999988877743
Q ss_pred cCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 259 RCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 259 ~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
+...+|.|+.|+|||||.+++..+..
T Consensus 130 --~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 130 --NKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred --cHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 38899999999999999999987664
No 40
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.41 E-value=3.4e-13 Score=125.91 Aligned_cols=140 Identities=12% Similarity=0.016 Sum_probs=95.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC----cccccccccccC--CCCCCccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG----LIGTYHDWCEAF--STYPRTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG----lig~~~d~~e~~--~~yp~sFDlVh~s~vf~ 254 (332)
..+|||+|||+|.++..|+....-..+|+++|. +.+++.+.++. +...+.-.+..+ .+++++||+|+|+.+++
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 198 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNGLNI 198 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCSSGG
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECChhh
Confidence 568999999999999999522111126788888 88888887763 221111111111 24559999999999999
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcCh---------------------------------------hHHHHHHHHH
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRESS---------------------------------------YFIDAVATIA 295 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~---------------------------------------~~~~~i~~i~ 295 (332)
|+++......++.++.|+|||||++++.+.. ...+.+.+++
T Consensus 199 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 278 (305)
T 3ocj_A 199 YEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQL 278 (305)
T ss_dssp GCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHH
Confidence 9976544456899999999999999998721 1256677777
Q ss_pred hcCcceeeecccccccccceEEEEEec
Q 020011 296 KGMKWSCHKEDTEYGVEKEKLLLCQKK 322 (332)
Q Consensus 296 ~~l~W~~~~~~~e~~~~~e~~li~~K~ 322 (332)
+.--++....... ....-..++++|+
T Consensus 279 ~~aGF~~v~~~~~-~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 279 EEAGFTDLRFEDD-RARLFPTVIARKP 304 (305)
T ss_dssp HHTTCEEEEEECC-TTSSSCEEEEECC
T ss_pred HHCCCEEEEEEcc-cCceeeEEEEecC
Confidence 7777776544322 1233457888885
No 41
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=5.2e-13 Score=121.78 Aligned_cols=97 Identities=18% Similarity=0.191 Sum_probs=75.7
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCC-CccceeEehhhhccccc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTAESH 258 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~~ 258 (332)
...+|||+|||+|.++..|++.+. .|+++|. +.+++.+.++.-+-..+.-++. .+++ ++||+|+|.++|+|++
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~- 108 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAEN-LALPDKSVDGVISILAIHHFS- 108 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTS-CCSCTTCBSEEEEESCGGGCS-
T ss_pred CCCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhh-CCCCCCCEeEEEEcchHhhcc-
Confidence 357899999999999999998765 6788898 8888877666422222211122 3577 9999999999999985
Q ss_pred cCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 259 RCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 259 ~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+...+|.|+.|+|| ||++++.+..
T Consensus 109 --~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 109 --HLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp --SHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred --CHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 57899999999999 9988877643
No 42
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.40 E-value=8e-13 Score=122.18 Aligned_cols=97 Identities=14% Similarity=0.111 Sum_probs=75.5
Q ss_pred CCCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Cc-cccc-ccccccCCCCCCccceeEeh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GL-IGTY-HDWCEAFSTYPRTYDLLHLD 250 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Gl-ig~~-~d~~e~~~~yp~sFDlVh~s 250 (332)
...+|||+|||+|.++..|++. +. .|+++|. +.+++.+.++ +. +-.. .|. +. .+++++||+|+|.
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~-~~~~~~fD~v~~~ 96 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGS---KYTGIDSGETLLAEARELFRLLPYDSEFLEGDA-TE-IELNDKYDIAICH 96 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTC---EEEEEESCHHHHHHHHHHHHSSSSEEEEEESCT-TT-CCCSSCEEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEEcch-hh-cCcCCCeeEEEEC
Confidence 3678999999999999999886 33 5678888 8888877765 11 1111 121 11 2456899999999
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
.+|+|++ +...++.++.|+|||||++++.++.
T Consensus 97 ~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 97 AFLLHMT---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SCGGGCS---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ChhhcCC---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 9999986 4679999999999999999998876
No 43
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.40 E-value=1.3e-12 Score=111.11 Aligned_cols=117 Identities=9% Similarity=0.059 Sum_probs=86.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-cccc-ccccccCCCCC-CccceeEeh-hhhccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-IGTY-HDWCEAFSTYP-RTYDLLHLD-GLFTAE 256 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-ig~~-~d~~e~~~~yp-~sFDlVh~s-~vf~h~ 256 (332)
..+|||+|||+|.++..|++.+. +++++|. +.+++.+.++.- +..+ .|..+ .+++ ++||+|+|+ .+++|+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~--~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSV--DQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTT--SCCCCCCEEEEEECCCCGGGS
T ss_pred CCeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEccccc--CCCCCCceeEEEECCcHHhhc
Confidence 56899999999999999999865 6788888 888888887642 1111 11111 2466 899999998 789887
Q ss_pred cccCCHHHHHHHHHhhhcCCcEEEEEcChh---HHHHHHHHHhcCcceeee
Q 020011 257 SHRCDMKFVLLEMDRILRPNGYVIVRESSY---FIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 257 ~~~c~~~~iL~EmdRVLRPGG~lii~d~~~---~~~~i~~i~~~l~W~~~~ 304 (332)
.. .+...+|.++.|+|||||.+++..+.. ..+.+..+++...+++..
T Consensus 122 ~~-~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 122 AE-DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELEN 171 (195)
T ss_dssp CH-HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEE
T ss_pred Ch-HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEee
Confidence 52 346789999999999999999976543 255666666666665543
No 44
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.40 E-value=6e-13 Score=118.21 Aligned_cols=100 Identities=14% Similarity=0.111 Sum_probs=75.7
Q ss_pred CCCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhcCc-ccccccccccCC--CCCCccceeEehhhhc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDRGL-IGTYHDWCEAFS--TYPRTYDLLHLDGLFT 254 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eRGl-ig~~~d~~e~~~--~yp~sFDlVh~s~vf~ 254 (332)
...+|||+|||+|.++..|++. +. .++++|. +.+++.+.++-- .+.+.-.+..+. +++++||+|+|+.+|+
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEA---TFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIH 120 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccc
Confidence 3578999999999999999887 44 6788888 889998887732 111111122222 3448999999999999
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
|+++ .....+|.|+.|+|||||.+++.+.
T Consensus 121 ~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 121 HLED-EDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp GSCH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCH-HHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9964 2344699999999999999999873
No 45
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.40 E-value=5.3e-13 Score=119.82 Aligned_cols=98 Identities=17% Similarity=0.122 Sum_probs=74.9
Q ss_pred CCCCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhcCc-ccccccccccCCCCCCccceeEehhhhcc
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDRGL-IGTYHDWCEAFSTYPRTYDLLHLDGLFTA 255 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eRGl-ig~~~d~~e~~~~yp~sFDlVh~s~vf~h 255 (332)
....+|||+|||+|.++..|++. +. .++++|. +.+++.+.++.- +-..+.-.+.+ +.+++||+|+|+.+|+|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~-~~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVN---VITGIDSDDDMLEKAADRLPNTNFGKADLATW-KPAQKADLLYANAVFQW 107 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTT---SEEEEESCHHHHHHHHHHSTTSEEEECCTTTC-CCSSCEEEEEEESCGGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHhCCCcEEEECChhhc-CccCCcCEEEEeCchhh
Confidence 34578999999999999999886 44 4677888 889999987731 11111111222 22289999999999999
Q ss_pred ccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 256 ESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 256 ~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
++ +...+|.++.|+|||||++++..+
T Consensus 108 ~~---~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 108 VP---DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp ST---THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CC---CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 85 478999999999999999999874
No 46
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.40 E-value=1.2e-12 Score=117.61 Aligned_cols=93 Identities=20% Similarity=0.193 Sum_probs=74.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC---c--cc-ccccccccCCCCC-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG---L--IG-TYHDWCEAFSTYP-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG---l--ig-~~~d~~e~~~~yp-~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++..|++.+. +++++|. +.+++.+.++- . +- ...|. +. .+++ ++||+|+|+.+|
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~-~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RA-IPLPDESVHGVIVVHLW 114 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TS-CCSCTTCEEEEEEESCG
T ss_pred CCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEccc-cc-CCCCCCCeeEEEECCch
Confidence 57899999999999999999865 6788888 88999888772 1 11 11121 12 3467 899999999999
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEE
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~ 282 (332)
+|++ +...++.|+.|+|||||.+++.
T Consensus 115 ~~~~---~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVP---DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCT---THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcC---CHHHHHHHHHHHCCCCcEEEEE
Confidence 9986 4689999999999999999986
No 47
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.39 E-value=1.1e-12 Score=119.31 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=75.3
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccccccccccc--CCCCC-CccceeEehhh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEA--FSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~--~~~yp-~sFDlVh~s~v 252 (332)
...+|||+|||+|.++..|++.+. ..|+++|. +.+++.+.++ |+...+.-.+.. -.+++ ++||+|+|..+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCEEEEeCCCCCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 367899999999999999999843 25788888 8888887766 332211111111 13466 89999999999
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
|+|+ +...+|.++.|+|||||++++.+.
T Consensus 124 ~~~~----~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 124 IYNI----GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp GGGT----CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ceec----CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9998 368899999999999999999874
No 48
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.39 E-value=8.9e-13 Score=118.45 Aligned_cols=97 Identities=12% Similarity=0.163 Sum_probs=74.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccccccccccc--CCCCC-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEA--FSTYP-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~--~~~yp-~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++..|++.... .|+++|. +.+++.+.++ |+...+.-.+.. -.+++ ++||+|+|+.+|
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 124 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVKG--QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAI 124 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCCS--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCS
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChH
Confidence 468999999999999999887431 6788888 8888877665 432211111111 23567 999999999999
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+|+ +...+|.++.|+|||||++++.++
T Consensus 125 ~~~----~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 125 YNI----GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp CCC----CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhc----CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 997 367899999999999999999874
No 49
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.39 E-value=5.3e-13 Score=117.41 Aligned_cols=100 Identities=13% Similarity=0.204 Sum_probs=77.1
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcc-cc-------ccccccc--CCCCC-CccceeEe
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLI-GT-------YHDWCEA--FSTYP-RTYDLLHL 249 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGli-g~-------~~d~~e~--~~~yp-~sFDlVh~ 249 (332)
..+|||+|||+|.++.+|++.+. +++++|. +.+++.+.++... +. +.-.+.. ..+++ ++||+|.|
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 56899999999999999999865 6788888 8899888875321 10 1111111 12466 89999999
Q ss_pred hhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 250 DGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 250 s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+.+|+|+++......+|.++.|+|||||.+++.+.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 99999997644455899999999999999999864
No 50
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.39 E-value=1.3e-12 Score=114.34 Aligned_cols=95 Identities=24% Similarity=0.271 Sum_probs=74.3
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC--cccccccccccCCCCC-CccceeEehhhhccc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG--LIGTYHDWCEAFSTYP-RTYDLLHLDGLFTAE 256 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG--lig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~ 256 (332)
...+|||+|||+|.++..| +. -+++++|. +.+++.+.++. +.-...|. +. .+++ ++||+|+|+++|+|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~-~~~~~~~fD~v~~~~~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRAPEATWVRAWG-EA-LPFPGESFDVVLLFTTLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHCTTSEEECCCT-TS-CCSCSSCEEEEEEESCTTTC
T ss_pred CCCeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhCCCcEEEEccc-cc-CCCCCCcEEEEEEcChhhhc
Confidence 4678999999999999998 32 15678888 88999988873 21111111 11 3566 899999999999998
Q ss_pred cccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 257 SHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 257 ~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+ +...+|.|+.|+|||||.+++.++.
T Consensus 109 ~---~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 109 E---DVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp S---CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred C---CHHHHHHHHHHHcCCCCEEEEEecC
Confidence 6 5789999999999999999998854
No 51
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.38 E-value=3.5e-13 Score=119.35 Aligned_cols=98 Identities=11% Similarity=0.043 Sum_probs=75.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-ccc-cccccccCCCCCCccceeEeh-hhhcccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-IGT-YHDWCEAFSTYPRTYDLLHLD-GLFTAES 257 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-ig~-~~d~~e~~~~yp~sFDlVh~s-~vf~h~~ 257 (332)
..+|||+|||+|.++..|++.+. +++++|. +.+++.+.++.- +.. ..|. .. .+++++||+|+|+ .+|+|+.
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~-~~-~~~~~~~D~v~~~~~~~~~~~ 115 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDM-RD-FRLGRKFSAVVSMFSSVGYLK 115 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCT-TT-CCCSSCEEEEEECTTGGGGCC
T ss_pred CCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCH-HH-cccCCCCcEEEEcCchHhhcC
Confidence 57899999999999999998765 6788888 889999987732 111 1111 11 1235899999964 5999986
Q ss_pred ccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 258 HRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 258 ~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+..+...+|.++.|+|||||.+++.+.
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 116 TTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 555678899999999999999999863
No 52
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=3.9e-13 Score=120.47 Aligned_cols=110 Identities=7% Similarity=-0.068 Sum_probs=79.0
Q ss_pred HHhhcCCCCCCCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCC------CCC-
Q 020011 170 YKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFS------TYP- 241 (332)
Q Consensus 170 y~~~l~~l~~~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~------~yp- 241 (332)
...+++.+.. ..+|||+|||+|.++..|++.+. +|+++|. +.+++.+.++.-...+.-.+..+. +|+
T Consensus 47 ~~~~~~~~~~--~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~ 121 (245)
T 3ggd_A 47 LPRFELLFNP--ELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHS 121 (245)
T ss_dssp HHHHTTTSCT--TSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHH
T ss_pred HHHHhhccCC--CCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECccccccccccccc
Confidence 3334444433 56799999999999999998765 5788888 889999887742111110111111 122
Q ss_pred -CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 242 -RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 242 -~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
..||+|+++.+++|+++ .+...+|.++.|+|||||++++.+..
T Consensus 122 ~~~~d~v~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 122 EIGDANIYMRTGFHHIPV-EKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHCSCEEEEESSSTTSCG-GGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred ccCccEEEEcchhhcCCH-HHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 24999999999999873 46789999999999999999888743
No 53
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.38 E-value=1.1e-12 Score=119.06 Aligned_cols=98 Identities=18% Similarity=0.163 Sum_probs=75.2
Q ss_pred CCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Cccccccccccc--CCCCC-CccceeEehh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEA--FSTYP-RTYDLLHLDG 251 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~--~~~yp-~sFDlVh~s~ 251 (332)
...+|||+|||+|.++..|++. +. +|+++|. +.+++.+.++ |+...+.-.+.. -.+++ ++||+|++..
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 137 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDV---RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALE 137 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEec
Confidence 3579999999999999999874 43 6788888 8888877765 442111111111 13577 8999999999
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+|+|+++ ...+|.|+.|+|||||.+++.+.
T Consensus 138 ~l~~~~~---~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 138 SLHHMPD---RGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp CTTTSSC---HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhhCCC---HHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999864 58999999999999999999873
No 54
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.38 E-value=6.1e-13 Score=122.90 Aligned_cols=119 Identities=13% Similarity=-0.044 Sum_probs=85.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcc--------------------cccccccccCC--
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLI--------------------GTYHDWCEAFS-- 238 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGli--------------------g~~~d~~e~~~-- 238 (332)
..+|||+|||+|.++.+|+++|. +|+++|. +.+++.|+++.-. ..+.-.+..+.
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 46899999999999999999986 6899999 9999998765310 11111112222
Q ss_pred CCC--CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC----------h--hHHHHHHHHHhcCcceeee
Q 020011 239 TYP--RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES----------S--YFIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 239 ~yp--~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~----------~--~~~~~i~~i~~~l~W~~~~ 304 (332)
+++ ++||+|.+..+|+|++. .+...++.++.|+|||||.|++... + -..+++..+... .|++..
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~-~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~ 223 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINP-GDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQC 223 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCG-GGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCH-HHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEE
Confidence 232 79999999999999973 5678899999999999999964321 0 124667777765 377654
Q ss_pred c
Q 020011 305 E 305 (332)
Q Consensus 305 ~ 305 (332)
.
T Consensus 224 ~ 224 (252)
T 2gb4_A 224 L 224 (252)
T ss_dssp E
T ss_pred E
Confidence 4
No 55
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.37 E-value=5.1e-13 Score=119.85 Aligned_cols=120 Identities=15% Similarity=0.118 Sum_probs=88.5
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcc------ccc-ccccccCCCCC-CccceeEehh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLI------GTY-HDWCEAFSTYP-RTYDLLHLDG 251 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGli------g~~-~d~~e~~~~yp-~sFDlVh~s~ 251 (332)
...+|||+|||+|.++..|++++. ..++++|. +.+++.+.++.-. -.+ .|. +. .+++ ++||+|+|+.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~-~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QD-FTPEPDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GG-CCCCSSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hh-cCCCCCCEEEEEEcc
Confidence 367899999999999999988753 26788888 8899988877421 111 111 11 2355 7999999999
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEcChh---------------HHHHHHHHHhcCcceeeec
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY---------------FIDAVATIAKGMKWSCHKE 305 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~---------------~~~~i~~i~~~l~W~~~~~ 305 (332)
+|+|+++ .....+|.++.|+|||||++++.++.. ..+++.++++..-+++...
T Consensus 155 ~l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 155 VIGHLTD-QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp CGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred hhhhCCH-HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 9999974 235689999999999999999977421 2566777777666765443
No 56
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.37 E-value=9.3e-13 Score=119.99 Aligned_cols=98 Identities=12% Similarity=0.172 Sum_probs=75.0
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--cc-ccccccCCCCC-CccceeEehh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TY-HDWCEAFSTYP-RTYDLLHLDG 251 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~-~d~~e~~~~yp-~sFDlVh~s~ 251 (332)
...+|||+|||+|.++..|++..- ...++++|. +.+++.+.++ |+.. .. .|. .. .+++ ++||+|+|+.
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~-~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIKNVKFLQANI-FS-LPFEDSSFDHIFVCF 113 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG-GG-CCSCTTCEEEEEEES
T ss_pred CCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccc-cc-CCCCCCCeeEEEEec
Confidence 367899999999999999988721 125778888 8888877765 3321 11 121 11 3566 9999999999
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+|+|+++ ...+|.++.|+|||||++++.++
T Consensus 114 ~l~~~~~---~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 114 VLEHLQS---PEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp CGGGCSC---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhcCC---HHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999864 67999999999999999999763
No 57
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.37 E-value=1.3e-12 Score=116.00 Aligned_cols=99 Identities=15% Similarity=0.129 Sum_probs=78.3
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcc---cc-cccccccCCCCC-CccceeEehhhhc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLI---GT-YHDWCEAFSTYP-RTYDLLHLDGLFT 254 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGli---g~-~~d~~e~~~~yp-~sFDlVh~s~vf~ 254 (332)
...+|||+|||+|.++..|++.+.. +++++|. +.+++.+.++... .. ..|. +. .+++ ++||+|+|+.+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~-~~~~~~~fD~v~~~~~l~ 118 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADL-DK-LHLPQDSFDLAYSSLALH 118 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCG-GG-CCCCTTCEEEEEEESCGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcCh-hh-ccCCCCCceEEEEecccc
Confidence 3578999999999999999988651 5678888 8899999887531 11 1221 12 3466 8999999999999
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
|++ +...+|.++.|+|||||.+++..+..
T Consensus 119 ~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 119 YVE---DVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp GCS---CHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred ccc---hHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 985 57899999999999999999987653
No 58
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.37 E-value=2.9e-13 Score=128.17 Aligned_cols=103 Identities=12% Similarity=0.135 Sum_probs=76.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-cc----------cc--cccc-----ccC-CCCC
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-IG----------TY--HDWC-----EAF-STYP 241 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-ig----------~~--~d~~-----e~~-~~yp 241 (332)
..+|||+|||+|+.+..++..+.. +|+++|. +.+++.|.+|.. .+ .+ .+.+ +.+ .+++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 568999999999876666655432 6799999 999999988721 01 01 1110 111 2467
Q ss_pred -CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 242 -RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 242 -~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
++||+|.|..+|+|+.+..+...+|.++.|+|||||+|++..+..
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 999999999999886444567899999999999999999988764
No 59
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.35 E-value=2.3e-12 Score=120.60 Aligned_cols=97 Identities=10% Similarity=-0.013 Sum_probs=75.3
Q ss_pred CCCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Cccccccccccc--CCCCC-CccceeEeh
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEA--FSTYP-RTYDLLHLD 250 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~--~~~yp-~sFDlVh~s 250 (332)
....+|||+|||+|.++..|+++ +. .|+++|. +.+++.|.++ |+...+.-.+.. -.+++ ++||+|+|.
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 192 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGS---RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNN 192 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEEC
Confidence 34678999999999999999887 54 5778888 8888877765 432111111111 13577 999999999
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.+|+|+. ...+|.++.|+|||||.+++.+
T Consensus 193 ~~l~~~~----~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 193 ESTMYVD----LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp SCGGGSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CchhhCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 9999983 7899999999999999999977
No 60
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.34 E-value=1.7e-12 Score=120.45 Aligned_cols=94 Identities=10% Similarity=-0.007 Sum_probs=70.7
Q ss_pred CCCeEEEecCcchHHHHHHhc---CCCeEEEEeecCc-hhhHHHHHhc-----CcccccccccccCC--CCC-------C
Q 020011 181 KIRNVMDMNTLYGGFAAAVID---DPLWVMNVVSSYA-ANTLAVVYDR-----GLIGTYHDWCEAFS--TYP-------R 242 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~---~~v~vmnv~p~d~-~~~l~~a~eR-----Glig~~~d~~e~~~--~yp-------~ 242 (332)
...+|||+|||+|.++..|++ .+. .|+++|. +.+++.+.++ |....+.-.+..+. +++ +
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFE---QIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCS---EEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCC
Confidence 467899999999999999994 444 6788888 8888888776 22111110111111 122 6
Q ss_pred ccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEE
Q 020011 243 TYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIV 281 (332)
Q Consensus 243 sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii 281 (332)
+||+|+|+.+|+|+ +...+|.++.|+|||||.|++
T Consensus 113 ~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 99999999999998 578999999999999999998
No 61
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.34 E-value=2.2e-12 Score=111.96 Aligned_cols=119 Identities=17% Similarity=0.130 Sum_probs=83.9
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc----cc-ccccccccCCCCC-CccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL----IG-TYHDWCEAFSTYP-RTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl----ig-~~~d~~e~~~~yp-~sFDlVh~s~vf~ 254 (332)
..+|||+|||+|.++..|++.+.. +++++|. +.+++.+.++.- +- ...|. .. .+++ ++||+|+++.+|+
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~-~~-~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDV-RK-LDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCT-TS-CCSCSSCEEEEEEESHHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcch-hc-CCCCCCcccEEEECcchh
Confidence 568999999999999999988652 5678888 888888887632 11 11221 11 2566 8999999999998
Q ss_pred cccc------------cCCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHH--hcCcceeeec
Q 020011 255 AESH------------RCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIA--KGMKWSCHKE 305 (332)
Q Consensus 255 h~~~------------~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~--~~l~W~~~~~ 305 (332)
|+.. ..+...+|.++.|+|||||.+++.+....- ....+. ....|.....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~~~~~~~~~~~~~~~ 182 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPH-FRTRHYAQAYYGWSLRHA 182 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHH-HHHHHHCCGGGCEEEEEE
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcH-HHHHHHhccccCcEEEEE
Confidence 7641 124578999999999999999999976431 122332 3346776544
No 62
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.34 E-value=1.2e-12 Score=113.91 Aligned_cols=98 Identities=13% Similarity=0.131 Sum_probs=73.4
Q ss_pred CCeEEEecCcchHH-HHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc-cccc-ccccccCCCCC-CccceeEehhh
Q 020011 182 IRNVMDMNTLYGGF-AAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL-IGTY-HDWCEAFSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggf-aa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl-ig~~-~d~~e~~~~yp-~sFDlVh~s~v 252 (332)
..+|||+|||+|.+ +..++..+. +++++|. +.+++.+.++ +. +-.. .|. +. .+++ ++||+|+|+.+
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~-~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDI-RK-LPFKDESMSFVYSYGT 98 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCT-TS-CCSCTTCEEEEEECSC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECch-hh-CCCCCCceeEEEEcCh
Confidence 46899999999997 556666665 6788888 8888887765 22 1111 121 11 3566 89999999999
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
++|++ ..+...++.++.|+|||||.+++.+..
T Consensus 99 l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 99 IFHMR-KNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp GGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHhCC-HHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 99985 345788999999999999999998743
No 63
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.34 E-value=2.4e-12 Score=114.03 Aligned_cols=91 Identities=19% Similarity=0.189 Sum_probs=72.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCC-CccceeEehhhhcccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~~~ 259 (332)
..+|||+|||+|.++..|++. +++|. +.+++.+.++++.-...|. +. .+++ ++||+|+|..+|+|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~~~~~~~d~-~~-~~~~~~~fD~v~~~~~l~~~~-- 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRGVFVLKGTA-EN-LPLKDESFDFALMVTTICFVD-- 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTTCEEEECBT-TB-CCSCTTCEEEEEEESCGGGSS--
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcCCEEEEccc-cc-CCCCCCCeeEEEEcchHhhcc--
Confidence 468999999999999999876 45666 7889999887542222221 12 3466 8999999999999985
Q ss_pred CCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 260 CDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 260 c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+...+|.++.|+|||||.+++.+.
T Consensus 117 -~~~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 117 -DPERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 468999999999999999999864
No 64
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.34 E-value=2.8e-13 Score=124.30 Aligned_cols=100 Identities=9% Similarity=-0.002 Sum_probs=72.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC-----c-----------------------------
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG-----L----------------------------- 226 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG-----l----------------------------- 226 (332)
..+|||+|||+|.++..++..++ -+|+++|. +.+++.|.++. .
T Consensus 56 g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 56 GDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp EEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 56899999999988887777765 26889999 88998876531 0
Q ss_pred -c--ccccccccc--CCCCC-CccceeEehhhhccc-cccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 227 -I--GTYHDWCEA--FSTYP-RTYDLLHLDGLFTAE-SHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 227 -i--g~~~d~~e~--~~~yp-~sFDlVh~s~vf~h~-~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+ ....|..+. +.+.+ .+||+|.|+.+|+|+ ++..+...+|.+|.|+|||||+|++++
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 0 001121111 11223 799999999999996 333456789999999999999999996
No 65
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.34 E-value=1.9e-12 Score=118.93 Aligned_cols=116 Identities=14% Similarity=0.129 Sum_probs=84.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCC--CCCCccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFS--TYPRTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~--~yp~sFDlVh~s~vf~ 254 (332)
..+|||+|||+|.++.+|++.+. +|+++|. +.+++.+.++ |+...+ .+..+. +++++||+|+|+.+|+
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~~d~~~~~~~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNIST--ALYDINAANIQENYDFIVSTVVFM 195 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEE--EECCGGGCCCCSCEEEEEECSSGG
T ss_pred CCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEE--EEeccccccccCCccEEEEccchh
Confidence 56899999999999999999876 6788888 8888877665 331111 111111 2358999999999999
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcCh--------------hHHHHHHHHHhcCcceeeec
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRESS--------------YFIDAVATIAKGMKWSCHKE 305 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~--------------~~~~~i~~i~~~l~W~~~~~ 305 (332)
|+++ .....++.++.|+|||||.+++.... -..++++++... |++...
T Consensus 196 ~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 196 FLNR-ERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp GSCG-GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred hCCH-HHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 9963 56789999999999999998775421 013456666655 777654
No 66
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.33 E-value=5e-13 Score=124.72 Aligned_cols=101 Identities=15% Similarity=0.185 Sum_probs=75.3
Q ss_pred CCCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhcCc-------------------------------
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDRGL------------------------------- 226 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eRGl------------------------------- 226 (332)
...+|||+|||+|.++..|++. +. .|+++|. +.+++.|.++--
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~---~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPS---RMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRK 122 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCS---EEEEEESCHHHHHHHHHTC--------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCC---EEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccc
Confidence 3578999999999999999886 33 6789999 889998887621
Q ss_pred ---------------------------------cc-ccccccc---cCCCCC-CccceeEehhhhcccc---ccCCHHHH
Q 020011 227 ---------------------------------IG-TYHDWCE---AFSTYP-RTYDLLHLDGLFTAES---HRCDMKFV 265 (332)
Q Consensus 227 ---------------------------------ig-~~~d~~e---~~~~yp-~sFDlVh~s~vf~h~~---~~c~~~~i 265 (332)
+. ..+|+.. .+.+++ ++||+|+|..+++|+. ....+..+
T Consensus 123 ~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 123 RSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp -------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 00 0111111 112345 9999999999998763 33467889
Q ss_pred HHHHHhhhcCCcEEEEEcC
Q 020011 266 LLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 266 L~EmdRVLRPGG~lii~d~ 284 (332)
+.++.|+|||||+|++...
T Consensus 203 l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHhCCCcEEEEecC
Confidence 9999999999999999764
No 67
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.33 E-value=8e-12 Score=110.82 Aligned_cols=137 Identities=11% Similarity=0.025 Sum_probs=94.4
Q ss_pred CCeEEEecCc-chHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Cc-ccccccccccCCCCC-CccceeEehhh
Q 020011 182 IRNVMDMNTL-YGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GL-IGTYHDWCEAFSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG-~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Gl-ig~~~d~~e~~~~yp-~sFDlVh~s~v 252 (332)
..+|||+||| +|.++..|++. +. .|+++|. +.+++.+.++ |+ +-.++.-...+.+++ ++||+|.|+-.
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNC---KVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 5789999999 99999999887 44 6788888 8888877655 33 111211111245677 99999999866
Q ss_pred hcccccc----------------CCHHHHHHHHHhhhcCCcEEEEEcC--hhHHHHHHHHHhcCcceeeecccccccccc
Q 020011 253 FTAESHR----------------CDMKFVLLEMDRILRPNGYVIVRES--SYFIDAVATIAKGMKWSCHKEDTEYGVEKE 314 (332)
Q Consensus 253 f~h~~~~----------------c~~~~iL~EmdRVLRPGG~lii~d~--~~~~~~i~~i~~~l~W~~~~~~~e~~~~~e 314 (332)
+.+..+. ..+..++.++.|+|||||.+++..+ ......+.+.++...|++.......+...-
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~~~~ 212 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGTRWR 212 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC-CE
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCCeEE
Confidence 6543321 1136799999999999999998654 345677888888888887766544444445
Q ss_pred eEEEEEe
Q 020011 315 KLLLCQK 321 (332)
Q Consensus 315 ~~li~~K 321 (332)
.+|+.+|
T Consensus 213 ~~l~f~~ 219 (230)
T 3evz_A 213 HSLIFFK 219 (230)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 6777766
No 68
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.32 E-value=1e-12 Score=119.26 Aligned_cols=97 Identities=15% Similarity=0.125 Sum_probs=71.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc----cc--ccccccccCCCCC-CccceeEehh--
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL----IG--TYHDWCEAFSTYP-RTYDLLHLDG-- 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl----ig--~~~d~~e~~~~yp-~sFDlVh~s~-- 251 (332)
..+|||+|||+|.++.+|++... -+++++|. +.+++.|.++.- .. ...++-+...+++ ++||.|...-
T Consensus 61 G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 56899999999999999988753 36778888 899999987642 11 1123322344678 8999997643
Q ss_pred ---hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 ---LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 ---vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.+.|+. +.+.++.|+.|+|||||.|++.+
T Consensus 139 ~~~~~~~~~---~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 139 LSEETWHTH---QFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CBGGGTTTH---HHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccchhhhc---chhhhhhhhhheeCCCCEEEEEe
Confidence 344443 45789999999999999999865
No 69
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.32 E-value=2.4e-12 Score=120.50 Aligned_cols=100 Identities=10% Similarity=-0.027 Sum_probs=76.5
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCccc-cccccccc-C--C-CCCCccceeEehhhhc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIG-TYHDWCEA-F--S-TYPRTYDLLHLDGLFT 254 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig-~~~d~~e~-~--~-~yp~sFDlVh~s~vf~ 254 (332)
...+|||+|||+|.++..|++++. .|+++|. +.+++.+.++.-.. ...++.+. . . ..+++||+|+|+.+|+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLIN 121 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGG
T ss_pred CcCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhH
Confidence 357899999999999999999876 6788898 99999998874211 11222111 1 1 1237999999999999
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
|+.. .+...++.+|.|+| |||.++++-..
T Consensus 122 ~~~~-~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 122 RFTT-EEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GSCH-HHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hCCH-HHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 9863 35678999999999 99999998643
No 70
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.32 E-value=6.6e-12 Score=106.71 Aligned_cols=113 Identities=15% Similarity=0.188 Sum_probs=78.8
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc-ccccc-cccCCCCC-CccceeEehhh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG-TYHDW-CEAFSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig-~~~d~-~e~~~~yp-~sFDlVh~s~v 252 (332)
...+|||+|||+|.++..|++.+. ++.++|. +.+++.+.++ |+.. .+.-. +....+++ ++||+|+++..
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~ 128 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPP 128 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEEEECCC
Confidence 457899999999999999988844 6778888 8888877765 3321 01111 12223345 89999999988
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcChh-HHHHHHHHHhcC
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY-FIDAVATIAKGM 298 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~-~~~~i~~i~~~l 298 (332)
++|.. .....++.++.|+|||||.+++..+.. ....+.+..+..
T Consensus 129 ~~~~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 173 (194)
T 1dus_A 129 IRAGK--EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDV 173 (194)
T ss_dssp STTCH--HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHH
T ss_pred cccch--hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHH
Confidence 87632 246789999999999999999988663 233344444333
No 71
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.32 E-value=2.5e-12 Score=124.67 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=75.3
Q ss_pred CCCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhc---------C-c----cccc-ccccccC--C--
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDR---------G-L----IGTY-HDWCEAF--S-- 238 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eR---------G-l----ig~~-~d~~e~~--~-- 238 (332)
...+|||+|||+|.++..|++. +. ..|+++|. +.+++.+.++ | + +-.. .|. +.+ .
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~-~~l~~~~~ 159 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEH--GKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFI-ENLATAEP 159 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTT--CEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCT-TCGGGCBS
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccH-HHhhhccc
Confidence 3578999999999999988774 22 26788888 8899998876 4 2 1111 111 111 1
Q ss_pred -CCC-CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 239 -TYP-RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 239 -~yp-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+++ ++||+|+++.+|+|++ +...+|.|+.|+|||||+|++.+
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLST---NKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhcCC---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 677 8999999999999986 46899999999999999999986
No 72
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.31 E-value=3.4e-12 Score=110.84 Aligned_cols=92 Identities=13% Similarity=0.064 Sum_probs=70.3
Q ss_pred eEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccc-ccc-ccccccCCCCC-CccceeEehhhhcc
Q 020011 184 NVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLI-GTY-HDWCEAFSTYP-RTYDLLHLDGLFTA 255 (332)
Q Consensus 184 ~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gli-g~~-~d~~e~~~~yp-~sFDlVh~s~vf~h 255 (332)
+|||+|||+|.++.+|++.+. +++++|. +.+++.+.++ |+. ... .|. .. .+++ ++||+|+|+ +.|
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~-~~~~~~~fD~v~~~--~~~ 104 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-AD-FDIVADAWEGIVSI--FCH 104 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TT-BSCCTTTCSEEEEE--CCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hh-cCCCcCCccEEEEE--hhc
Confidence 899999999999999999875 6788888 8888888776 321 111 111 11 2466 899999995 456
Q ss_pred ccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 256 ESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 256 ~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+. ..+...+|.++.|+|||||.+++.+
T Consensus 105 ~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 105 LP-SSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp CC-HHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred CC-HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 53 3456789999999999999999986
No 73
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.31 E-value=4e-12 Score=114.05 Aligned_cols=99 Identities=16% Similarity=0.198 Sum_probs=72.9
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccc-ccc-ccccccCCCCCCccceeEeh-hh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLI-GTY-HDWCEAFSTYPRTYDLLHLD-GL 252 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gli-g~~-~d~~e~~~~yp~sFDlVh~s-~v 252 (332)
...+|||+|||+|.++..|++.+. +++++|. +.+++.+.++ |+. -.+ .|.. . .+++++||+|+|. .+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~-~-~~~~~~fD~v~~~~~~ 115 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVL-E-IAFKNEFDAVTMFFST 115 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGG-G-CCCCSCEEEEEECSSG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChh-h-cccCCCccEEEEcCCc
Confidence 357899999999999999999876 6788888 8888888765 321 111 1211 1 2345899999986 44
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
++|+. ..+...+|.++.|+|||||.+++..+.
T Consensus 116 ~~~~~-~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 116 IMYFD-EEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp GGGSC-HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhcCC-HHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 55553 345678999999999999999987554
No 74
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.31 E-value=1e-11 Score=108.49 Aligned_cols=115 Identities=14% Similarity=0.093 Sum_probs=85.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCC-CccceeEehhhhcc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTA 255 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp-~sFDlVh~s~vf~h 255 (332)
..+|||+|||+|.++..|++.+. ..++++|. +.+++.+.++ |+.. +.-.+..+..++ ++||+|+++.++++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADVDGKFDLIVANILAEI 137 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTCCSCEEEEEEESCHHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccCCCCceEEEECCcHHH
Confidence 46899999999999999998764 25678888 8888888776 4322 211223334455 99999999988876
Q ss_pred ccccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCcceeeec
Q 020011 256 ESHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKWSCHKE 305 (332)
Q Consensus 256 ~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W~~~~~ 305 (332)
+ ..++.++.|+|||||++++.+.. ...+.+..+++...++....
T Consensus 138 ~------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 138 L------LDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp H------HHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred H------HHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence 4 57999999999999999998633 34667777777777766543
No 75
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.30 E-value=3.7e-12 Score=113.02 Aligned_cols=97 Identities=14% Similarity=0.203 Sum_probs=74.6
Q ss_pred CeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC----c-cccc-ccccccCCCCCCccceeEehh-hhc
Q 020011 183 RNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG----L-IGTY-HDWCEAFSTYPRTYDLLHLDG-LFT 254 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG----l-ig~~-~d~~e~~~~yp~sFDlVh~s~-vf~ 254 (332)
.+|||+|||+|.++..|++. . +++++|. +.+++.+.++. . +-.. .|.. . .+++++||+|+|.. +|+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~-~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~-~~~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH-Y---EVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMR-E-LELPEPVDAITILCDSLN 108 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT-S---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGG-G-CCCSSCEEEEEECTTGGG
T ss_pred CeEEEecCCCCHHHHHHhhC-C---eEEEEECCHHHHHHHHHhhhhcCCceEEEEcChh-h-cCCCCCcCEEEEeCCchh
Confidence 68999999999999999887 3 6788888 88888887762 1 1111 1111 1 23458999999986 999
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
|+.+..+...+|.++.|+|||||.+++..+.
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 9865556788999999999999999986543
No 76
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.30 E-value=9.6e-12 Score=107.78 Aligned_cols=140 Identities=14% Similarity=0.039 Sum_probs=91.2
Q ss_pred CCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhc----Cc---ccccccccccCCCCC-CccceeEeh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDR----GL---IGTYHDWCEAFSTYP-RTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eR----Gl---ig~~~d~~e~~~~yp-~sFDlVh~s 250 (332)
..+|||+|||+|.++..|++. +. ..++++|. +.+++.+.++ |+ +-.++.-.+.+..+. ++||+|.++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGEN--GRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTT--CEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 468999999999999999876 22 15788888 8888887766 33 111111112233345 899999998
Q ss_pred hhh-c-----cccccCCHHHHHHHHHhhhcCCcEEEEEcCh------hHHHHHHHHHhcCc---ceeeeccccccc-ccc
Q 020011 251 GLF-T-----AESHRCDMKFVLLEMDRILRPNGYVIVRESS------YFIDAVATIAKGMK---WSCHKEDTEYGV-EKE 314 (332)
Q Consensus 251 ~vf-~-----h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~------~~~~~i~~i~~~l~---W~~~~~~~e~~~-~~e 314 (332)
..+ . +.....+...++.++.|+|||||++++.... .....+.+..+.+. |.+.....-+.. ...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp 180 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPP 180 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCC
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCC
Confidence 654 1 0111112356999999999999999998622 23455666665554 877666554444 455
Q ss_pred eEEEEEecc
Q 020011 315 KLLLCQKKL 323 (332)
Q Consensus 315 ~~li~~K~~ 323 (332)
.++|.+|..
T Consensus 181 ~~~~~~~~~ 189 (197)
T 3eey_A 181 ILVCIEKIS 189 (197)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEcc
Confidence 677777654
No 77
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.30 E-value=1.8e-12 Score=120.29 Aligned_cols=99 Identities=12% Similarity=0.122 Sum_probs=73.1
Q ss_pred eEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcc------cccccccccC--CCCCCccceeEeh-hhh
Q 020011 184 NVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLI------GTYHDWCEAF--STYPRTYDLLHLD-GLF 253 (332)
Q Consensus 184 ~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGli------g~~~d~~e~~--~~yp~sFDlVh~s-~vf 253 (332)
+|||+|||+|.++..|++.+. +|+++|. +.+++.+.++.-. ..+.-.+..+ .+++++||+|+|+ .++
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 161 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSGSI 161 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHHHH
T ss_pred cEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCccc
Confidence 899999999999999999875 5788888 8888888776210 0011111122 2346999999975 666
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
+|++ ..+...+|.++.|+|||||.|++.....
T Consensus 162 ~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 162 NELD-EADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp TTSC-HHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ccCC-HHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 6654 3456889999999999999999988553
No 78
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.30 E-value=7.7e-12 Score=119.47 Aligned_cols=145 Identities=10% Similarity=0.011 Sum_probs=93.9
Q ss_pred HHHHHHHHHhhcCCCCCCCCCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhc----Ccccccccccc
Q 020011 163 WNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCE 235 (332)
Q Consensus 163 W~~~v~~y~~~l~~l~~~~~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e 235 (332)
|...+.....++ .+.+ ..+|||+|||+|++++.+..+ +. .|+++|. +++++.|.++ |+ ..+.-.+.
T Consensus 107 ~~~l~~~E~~la-~l~~--g~rVLDIGcG~G~~ta~~lA~~~ga---~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~g 179 (298)
T 3fpf_A 107 YLELLKNEAALG-RFRR--GERAVFIGGGPLPLTGILLSHVYGM---RVNVVEIEPDIAELSRKVIEGLGV-DGVNVITG 179 (298)
T ss_dssp HHHHHHHHHHHT-TCCT--TCEEEEECCCSSCHHHHHHHHTTCC---EEEEEESSHHHHHHHHHHHHHHTC-CSEEEEES
T ss_pred HHHHHHHHHHHc-CCCC--cCEEEEECCCccHHHHHHHHHccCC---EEEEEECCHHHHHHHHHHHHhcCC-CCeEEEEC
Confidence 444444333333 3444 689999999999887655432 43 6788888 8899988876 55 22221222
Q ss_pred cCCCCC-CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChhHHHH----H-HHHHhcCcceeeeccccc
Q 020011 236 AFSTYP-RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDA----V-ATIAKGMKWSCHKEDTEY 309 (332)
Q Consensus 236 ~~~~yp-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~----i-~~i~~~l~W~~~~~~~e~ 309 (332)
....+| ++||+|++..+ . .+...++.|+.|+|||||.|++++....-.- + ....+ .|+.....+..
T Consensus 180 Da~~l~d~~FDvV~~~a~---~---~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~ 251 (298)
T 3fpf_A 180 DETVIDGLEFDVLMVAAL---A---EPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPS 251 (298)
T ss_dssp CGGGGGGCCCSEEEECTT---C---SCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCC
T ss_pred chhhCCCCCcCEEEECCC---c---cCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCC
Confidence 333467 99999998654 2 3577999999999999999999985532000 0 01122 56666655555
Q ss_pred ccccceEEEEEec
Q 020011 310 GVEKEKLLLCQKK 322 (332)
Q Consensus 310 ~~~~e~~li~~K~ 322 (332)
+.....+++++|.
T Consensus 252 ~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 252 GKVNNTSVLVFKC 264 (298)
T ss_dssp TTCCCEEEEEEEC
T ss_pred CCcCcEEEEEEcc
Confidence 4445678888774
No 79
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.29 E-value=7.7e-12 Score=105.82 Aligned_cols=112 Identities=13% Similarity=0.077 Sum_probs=78.9
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--ccc-cccccCCCCC-CccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TYH-DWCEAFSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~~-d~~e~~~~yp-~sFDlVh~s~v 252 (332)
..+|||+|||+|.++..|++..- ...++++|. +.+++.+.++ |+.. .++ |..+.+ +.. ++||+|+++.+
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~D~i~~~~~ 103 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAF-DDVPDNPDVIFIGGG 103 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGG-GGCCSCCSEEEECC-
T ss_pred CCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhh-hccCCCCCEEEECCc
Confidence 56899999999999999988721 136788888 8888888765 4321 221 111222 233 78999999999
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCccee
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKWSC 302 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W~~ 302 (332)
++| ..++.++.|+|||||.+++.... +....+..+.+....++
T Consensus 104 ~~~-------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~ 147 (178)
T 3hm2_A 104 LTA-------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTI 147 (178)
T ss_dssp TTC-------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEE
T ss_pred ccH-------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCee
Confidence 887 36999999999999999998754 33455555555554443
No 80
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.29 E-value=8.5e-12 Score=109.56 Aligned_cols=98 Identities=18% Similarity=0.252 Sum_probs=73.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC----c-ccc-cccccccCCCCC-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG----L-IGT-YHDWCEAFSTYP-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG----l-ig~-~~d~~e~~~~yp-~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++..|++.+. .++++|. +.+++.+.++. . +-. ..|.. . .+++ ++||+|+|+.++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~-~~~~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-K-LSFEDKTFDYVIFIDSI 113 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-S-CCSCTTCEEEEEEESCG
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchh-c-CCCCCCcEEEEEEcCch
Confidence 56899999999999999999876 6788888 88888887652 1 111 12211 1 2466 899999999995
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
++.. ..+...++.++.|+|||||.+++.++.
T Consensus 114 ~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 114 VHFE-PLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GGCC-HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HhCC-HHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 5432 134678999999999999999998875
No 81
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.29 E-value=2.1e-11 Score=107.01 Aligned_cols=119 Identities=17% Similarity=0.090 Sum_probs=82.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCC-CccceeEehhhhcccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~~~ 259 (332)
..+|||+|||+|.++..|. . +++++|. +. .+.-...|. +. .+++ ++||+|+|+.+|+|
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-~-----~v~~~D~s~~--------~~~~~~~d~-~~-~~~~~~~fD~v~~~~~l~~---- 127 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-N-----PVHCFDLASL--------DPRVTVCDM-AQ-VPLEDESVDVAVFCLSLMG---- 127 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-S-----CEEEEESSCS--------STTEEESCT-TS-CSCCTTCEEEEEEESCCCS----
T ss_pred CCeEEEECCcCCHHHHHhh-c-----cEEEEeCCCC--------CceEEEecc-cc-CCCCCCCEeEEEEehhccc----
Confidence 5689999999999999884 1 3455555 32 111111111 11 3577 89999999999964
Q ss_pred CCHHHHHHHHHhhhcCCcEEEEEcChh---HHHHHHHHHhcCcceeeecccccccccceEEEEEec
Q 020011 260 CDMKFVLLEMDRILRPNGYVIVRESSY---FIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQKK 322 (332)
Q Consensus 260 c~~~~iL~EmdRVLRPGG~lii~d~~~---~~~~i~~i~~~l~W~~~~~~~e~~~~~e~~li~~K~ 322 (332)
.+...+|.|+.|+|||||.+++.+... ..+.+..+++...+++...+.. ...-.+++++|.
T Consensus 128 ~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~--~~~~~~~~~~k~ 191 (215)
T 2zfu_A 128 TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLT--NSHFFLFDFQKT 191 (215)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECC--STTCEEEEEEEC
T ss_pred cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecC--CCeEEEEEEEec
Confidence 357899999999999999999987654 3567777777777776554322 123457888886
No 82
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.28 E-value=1.3e-12 Score=120.71 Aligned_cols=101 Identities=13% Similarity=0.037 Sum_probs=69.5
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC------------------ccc-------------
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG------------------LIG------------- 228 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG------------------lig------------- 228 (332)
...+|||+|||+|.++..++..+. ..|+++|. +.+++.|.++- +.|
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHF--EDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGC--SEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCC--CeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 357899999999996544443222 16788999 88988776631 011
Q ss_pred ------ccccccccCC----CCC-CccceeEehhhhcccccc-CCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 229 ------TYHDWCEAFS----TYP-RTYDLLHLDGLFTAESHR-CDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 229 ------~~~d~~e~~~----~yp-~sFDlVh~s~vf~h~~~~-c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
...|..+..+ .++ ++||+|+|+.+|+|+... .+...+|.|+.|+|||||+|++.+
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 0012222111 245 779999999999996431 246789999999999999999964
No 83
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.28 E-value=2.4e-12 Score=117.56 Aligned_cols=101 Identities=17% Similarity=0.126 Sum_probs=75.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc---cccc-ccccccCCCC-C-CccceeEeh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL---IGTY-HDWCEAFSTY-P-RTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl---ig~~-~d~~e~~~~y-p-~sFDlVh~s 250 (332)
..+|||+|||+|.++..|++.+. ..++++|. +.+++.+.++ |+ +... .|. .. .++ + ++||+|+|+
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~-~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS-YG-RHMDLGKEFDVISSQ 140 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT-TT-SCCCCSSCEEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCc-cc-cccCCCCCcCEEEEC
Confidence 46899999999999999888764 25788888 8888888776 22 1111 111 11 245 4 899999999
Q ss_pred hhhccc-cccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 251 GLFTAE-SHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 251 ~vf~h~-~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
.+|+|. .+..+...+|.++.|+|||||.+++..+..
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 999873 223456789999999999999999998764
No 84
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.27 E-value=2.1e-11 Score=106.27 Aligned_cols=128 Identities=7% Similarity=0.012 Sum_probs=86.0
Q ss_pred CCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCC-C-CccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTY-P-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~y-p-~sFDlVh~s~v 252 (332)
..+|||+|||+|.++..|+.. +. .++++|. +.+++.+.++ |+.. +.-.+..+..+ + ++||+|+|..+
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~D~i~~~~~ 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEA---HFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPSEPPFDGVISRAF 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCCCSCEEEEECSCS
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCccCCcCEEEEecc
Confidence 458999999999999998875 33 5678887 7788777664 4422 11111222222 4 89999998642
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCcceeeec---ccccccccceEEEEEec
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHKE---DTEYGVEKEKLLLCQKK 322 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~~~~---~~e~~~~~e~~li~~K~ 322 (332)
..+..++.++.|+|||||++++......-+.++.+.+ .|+.... ...+......+++++|.
T Consensus 142 -------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 -------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp -------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred -------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 2467899999999999999999876665667777665 6665431 22222345667777764
No 85
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.27 E-value=2.2e-12 Score=115.75 Aligned_cols=101 Identities=15% Similarity=0.152 Sum_probs=71.9
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-----ccc-cccccccCCCCC-CccceeEe-hhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-----IGT-YHDWCEAFSTYP-RTYDLLHL-DGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-----ig~-~~d~~e~~~~yp-~sFDlVh~-s~v 252 (332)
..+|||+|||+|.++..|++.+. -.|+++|. +.+++.|.++.- +-. ..|+.+...+++ ++||+|++ ...
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 56899999999999999987654 26788999 899999887641 111 112212123688 99999999 444
Q ss_pred hccccc--cCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 253 FTAESH--RCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 253 f~h~~~--~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+ +..+ ..+.+.++.|+.|+|||||+|++.+..
T Consensus 139 ~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 139 L-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp C-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred c-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 3 2221 223457899999999999999987744
No 86
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.27 E-value=6.1e-12 Score=118.72 Aligned_cols=107 Identities=16% Similarity=0.132 Sum_probs=76.2
Q ss_pred CCCCCCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----Cccccccccc-ccCCCCCCccceeEeh
Q 020011 176 ALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIGTYHDWC-EAFSTYPRTYDLLHLD 250 (332)
Q Consensus 176 ~l~~~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig~~~d~~-e~~~~yp~sFDlVh~s 250 (332)
.+......+|||+|||+|.++..|++..-- ..++.+|.+.+++.+.++ |+...+.-.. ..+.++|.+||+|+|.
T Consensus 164 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~ 242 (332)
T 3i53_A 164 KYDWAALGHVVDVGGGSGGLLSALLTAHED-LSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLS 242 (332)
T ss_dssp SSCCGGGSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEE
T ss_pred hCCCCCCCEEEEeCCChhHHHHHHHHHCCC-CeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEe
Confidence 344445689999999999999999874211 145566667777777654 4422111111 1234566789999999
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
++|+|+++ .....+|.++.|+|||||+|+|.+.
T Consensus 243 ~vlh~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 243 AVLHDWDD-LSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp SCGGGSCH-HHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred hhhccCCH-HHHHHHHHHHHHhcCCCCEEEEEee
Confidence 99999975 3457899999999999999999874
No 87
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.26 E-value=9.1e-12 Score=119.75 Aligned_cols=102 Identities=12% Similarity=0.197 Sum_probs=74.7
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----Cccccccccc-ccCC---CCCCccceeEehhh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIGTYHDWC-EAFS---TYPRTYDLLHLDGL 252 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig~~~d~~-e~~~---~yp~sFDlVh~s~v 252 (332)
..++|||+|||+|.++..|+++.-- ..++.+|.+.+++.+.++ |+...+.-.+ ..+. ++|++||+|+++++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~v 257 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKE-VEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQF 257 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTT-CEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEech
Confidence 4679999999999999999874211 156777777788877765 3311111011 1222 46789999999999
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
|+|+++ .+...+|.++.|+|||||.|+|.+.
T Consensus 258 lh~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 258 LDCFSE-EEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp STTSCH-HHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hhhCCH-HHHHHHHHHHHHhcCCCcEEEEEee
Confidence 999875 3456899999999999999999773
No 88
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.26 E-value=5.8e-11 Score=107.06 Aligned_cols=158 Identities=9% Similarity=0.067 Sum_probs=96.0
Q ss_pred chhhHHHHHHHHHhhcCCCCCCCCCeEEEecCcchHHHHHHhc--CCCeEEEEeecCc-hhhHHHHHhc----Ccc--cc
Q 020011 159 DDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVID--DPLWVMNVVSSYA-ANTLAVVYDR----GLI--GT 229 (332)
Q Consensus 159 d~~~W~~~v~~y~~~l~~l~~~~~r~VLD~GCG~Ggfaa~L~~--~~v~vmnv~p~d~-~~~l~~a~eR----Gli--g~ 229 (332)
....|...+.....++..+.-....+|||+|||+|.++..|+. .+. .|+++|. +.+++++.++ |+. -.
T Consensus 48 ~~~~~~~~~~d~l~~~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~ 124 (240)
T 1xdz_A 48 KKEVYLKHFYDSITAAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQLENTTF 124 (240)
T ss_dssp HHHHHHHTHHHHHGGGGTSCGGGCCEEEEECSSSCTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSEEE
T ss_pred HHHHHHHHHHHHHhHHHhcccCCCCEEEEecCCCCHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCEEE
Confidence 3445554444333222222212356899999999999988874 343 5778888 8788777654 442 12
Q ss_pred cccccccCCC---CCCccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh---hHHHHHHHHHhcCcceee
Q 020011 230 YHDWCEAFST---YPRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS---YFIDAVATIAKGMKWSCH 303 (332)
Q Consensus 230 ~~d~~e~~~~---yp~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~---~~~~~i~~i~~~l~W~~~ 303 (332)
++.-.+.+.. .+++||+|+|..+ .++..++.++.|+|||||.|++.... +.+..+.+.++...+...
T Consensus 125 ~~~d~~~~~~~~~~~~~fD~V~~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~ 197 (240)
T 1xdz_A 125 CHDRAETFGQRKDVRESYDIVTARAV-------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELE 197 (240)
T ss_dssp EESCHHHHTTCTTTTTCEEEEEEECC-------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEE
T ss_pred EeccHHHhcccccccCCccEEEEecc-------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEe
Confidence 2211122221 2479999999763 35778999999999999999997643 334555566666666653
Q ss_pred ecc---cccccccceEEEEEeccCCC
Q 020011 304 KED---TEYGVEKEKLLLCQKKLWYS 326 (332)
Q Consensus 304 ~~~---~e~~~~~e~~li~~K~~w~~ 326 (332)
... .......-.+++.+|.--++
T Consensus 198 ~~~~~~~~~~~~~~~l~~~~k~~~~~ 223 (240)
T 1xdz_A 198 NIHSFKLPIEESDRNIMVIRKIKNTP 223 (240)
T ss_dssp EEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred EEEEEecCCCCCceEEEEEEecCCCC
Confidence 321 12112334567777765443
No 89
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.25 E-value=2e-11 Score=116.18 Aligned_cols=130 Identities=18% Similarity=0.185 Sum_probs=89.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC--cc----cccccccccCCCCC-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG--LI----GTYHDWCEAFSTYP-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG--li----g~~~d~~e~~~~yp-~sFDlVh~s~vf 253 (332)
.++|||+|||+|+|+..|++++. -.|+++|. ++||+.+..+. +. ..+... . ...+| .+||+|.|+.+|
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l-~-~~~l~~~~fD~v~~d~sf 161 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYA-E-PVDFTEGLPSFASIDVSF 161 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGC-C-GGGCTTCCCSEEEECCSS
T ss_pred ccEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceec-c-hhhCCCCCCCEEEEEeeH
Confidence 57899999999999999998875 25688888 88888755421 11 111111 0 12256 569999999888
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcCh----------------------hHHHHHHHHHhcCcceeeecc--ccc
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESS----------------------YFIDAVATIAKGMKWSCHKED--TEY 309 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~----------------------~~~~~i~~i~~~l~W~~~~~~--~e~ 309 (332)
+++ ..+|.|+.|+|||||.|++...+ ..++++.+.+...-|.+.... ...
T Consensus 162 ~sl------~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~ 235 (291)
T 3hp7_A 162 ISL------NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQ 235 (291)
T ss_dssp SCG------GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSC
T ss_pred hhH------HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Confidence 765 46999999999999999987221 246777888788888765432 223
Q ss_pred cc--ccceEEEEEe
Q 020011 310 GV--EKEKLLLCQK 321 (332)
Q Consensus 310 ~~--~~e~~li~~K 321 (332)
|+ +.|-++..+|
T Consensus 236 g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 236 GGHGNIEFLAHLEK 249 (291)
T ss_dssp CGGGCCCEEEEEEE
T ss_pred CCCcCHHHHHHhhh
Confidence 44 4455555555
No 90
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.25 E-value=3.8e-12 Score=119.01 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=76.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-------------cc-ccccccccCC---CCC--
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-------------IG-TYHDWCEAFS---TYP-- 241 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-------------ig-~~~d~~e~~~---~yp-- 241 (332)
..+|||+|||+|.++..|++.+. ..++++|. +.+++.+.++.- +- ...| ++.+. +++
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRI--NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD-SSKELLIDKFRDP 111 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC-TTTSCSTTTCSST
T ss_pred CCEEEEECCCCcHHHHHHHhcCC--CEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec-ccccchhhhcccC
Confidence 56899999999999999987643 26788888 888888877621 11 1112 12222 253
Q ss_pred -CccceeEehhhhccc-cccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 242 -RTYDLLHLDGLFTAE-SHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 242 -~sFDlVh~s~vf~h~-~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
++||+|.|+.+|+|. .+..+...+|.++.|+|||||.|++..+..
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 599999999999987 443456789999999999999999988764
No 91
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.25 E-value=6.2e-11 Score=103.58 Aligned_cols=116 Identities=8% Similarity=-0.012 Sum_probs=82.6
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccC-CCCC--CccceeEehhh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAF-STYP--RTYDLLHLDGL 252 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~-~~yp--~sFDlVh~s~v 252 (332)
...+|||+|||+|.++..|++.+-- ..|+++|. +.+++.+.++ |+.. +.-.+..+ ..++ .+||+|+++..
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~D~i~~~~~ 117 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPN-GRIFALERNPQYLGFIRDNLKKFVARN-VTLVEAFAPEGLDDLPDPDRVFIGGS 117 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTT-SEEEEEECCHHHHHHHHHHHHHHTCTT-EEEEECCTTTTCTTSCCCSEEEESCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeCChhhhhhcCCCCCEEEECCC
Confidence 3578999999999999999887511 15678888 8888888765 3311 11111111 2222 78999999976
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCcceeee
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W~~~~ 304 (332)
++ ++..++.++.|+|||||.+++.... +....+.++++...|++..
T Consensus 118 ~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 118 GG------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEV 164 (204)
T ss_dssp TT------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEE
T ss_pred Cc------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCceeE
Confidence 64 5678999999999999999998654 4566777777777775443
No 92
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.25 E-value=1.1e-11 Score=112.68 Aligned_cols=99 Identities=13% Similarity=0.095 Sum_probs=68.2
Q ss_pred CCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hh------hHHHHHhc----Cccc---cc-cc-ccccCCCCC-C
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-AN------TLAVVYDR----GLIG---TY-HD-WCEAFSTYP-R 242 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~------~l~~a~eR----Glig---~~-~d-~~e~~~~yp-~ 242 (332)
...+|||+|||+|.++..|+++ +.. ..|+++|. +. +++.+.++ |+.. .. .| ......+|+ +
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~-~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 121 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSS-GHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQ 121 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTT-CEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCC-CEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCC
Confidence 3578999999999999999886 310 15667777 44 77777655 3211 11 11 111223567 8
Q ss_pred ccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 243 TYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 243 sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+||+|+|+.+|+|+++ ...++..+.++++|||++++.+
T Consensus 122 ~fD~v~~~~~l~~~~~---~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 122 HFDRVVLAHSLWYFAS---ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp CCSEEEEESCGGGSSC---HHHHHHHHHHHTTTCSEEEEEE
T ss_pred CEEEEEEccchhhCCC---HHHHHHHHHHHhCCCCEEEEEE
Confidence 9999999999999875 3556666666677799999975
No 93
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.25 E-value=4.4e-11 Score=107.02 Aligned_cols=97 Identities=16% Similarity=0.144 Sum_probs=62.9
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhh----HHHHHhcCccc-cccccccc--CCCCCCccceeEehhh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANT----LAVVYDRGLIG-TYHDWCEA--FSTYPRTYDLLHLDGL 252 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~----l~~a~eRGlig-~~~d~~e~--~~~yp~sFDlVh~s~v 252 (332)
...+|||+|||+|.++..|++..-- -.|+++|. +.+ ++.+..+.-+. ...|..+. +.+++++||+|.|+ +
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~-~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~-~ 134 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDE-GIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD-I 134 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTT-SEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC-C
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEe-c
Confidence 3568999999999999988875211 15677887 654 44554442211 11222111 12445899999997 2
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. ......++.|+.|+|||||.|++.-
T Consensus 135 ~~----~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 135 AQ----KNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CS----TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cC----hhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 22 1223456999999999999999974
No 94
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.25 E-value=3e-11 Score=111.29 Aligned_cols=135 Identities=13% Similarity=0.180 Sum_probs=92.6
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Ccc--cccccccccCCCCC-CccceeEeh--
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLI--GTYHDWCEAFSTYP-RTYDLLHLD-- 250 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Gli--g~~~d~~e~~~~yp-~sFDlVh~s-- 250 (332)
..+|||+|||+|.++..|++. +. .+++++|. +.+++.+.++ |+. -.++ +..+.+++ ++||+|+++
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~--~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~--~d~~~~~~~~~fD~Iv~npP 185 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPD--CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQ--SDWFSALAGQQFAMIVSNPP 185 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTT--SEEEEECSSHHHHHHHHHHHHHHTCCSEEEEC--CSTTGGGTTCCEEEEEECCC
T ss_pred CCEEEEecCCccHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEE--cchhhhcccCCccEEEECCC
Confidence 468999999999999999854 22 25788888 8888887765 332 1111 11223454 899999997
Q ss_pred -----------hhhccccccC---------CHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCcceeeecccccc
Q 020011 251 -----------GLFTAESHRC---------DMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHKEDTEYG 310 (332)
Q Consensus 251 -----------~vf~h~~~~c---------~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~~~~~~e~~ 310 (332)
.+++|.+... .+..++.++.|+|||||++++.......+.+.++++...|+.... ..+-
T Consensus 186 y~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~-~~d~ 264 (276)
T 2b3t_A 186 YIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVET-CRDY 264 (276)
T ss_dssp CBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCE-EECT
T ss_pred CCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEE-EecC
Confidence 4555554221 246799999999999999999887766677777777666653221 1222
Q ss_pred cccceEEEEEe
Q 020011 311 VEKEKLLLCQK 321 (332)
Q Consensus 311 ~~~e~~li~~K 321 (332)
.+.+++++++|
T Consensus 265 ~g~~r~~~~~~ 275 (276)
T 2b3t_A 265 GDNERVTLGRY 275 (276)
T ss_dssp TSSEEEEEEEC
T ss_pred CCCCcEEEEEE
Confidence 35678888775
No 95
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.24 E-value=2.9e-12 Score=115.08 Aligned_cols=120 Identities=12% Similarity=0.081 Sum_probs=83.1
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc---------------------------------
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL--------------------------------- 226 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl--------------------------------- 226 (332)
...+|||+|||+|.++..|+..+. .+|+++|. +.+++.+.++.-
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 357899999999999999888764 36788898 888888866521
Q ss_pred --c-cc-cccccccCCC---CC-CccceeEehhhhcccccc-CCHHHHHHHHHhhhcCCcEEEEEcChh-----------
Q 020011 227 --I-GT-YHDWCEAFST---YP-RTYDLLHLDGLFTAESHR-CDMKFVLLEMDRILRPNGYVIVRESSY----------- 286 (332)
Q Consensus 227 --i-g~-~~d~~e~~~~---yp-~sFDlVh~s~vf~h~~~~-c~~~~iL~EmdRVLRPGG~lii~d~~~----------- 286 (332)
+ .. ..|..+ ..+ .. ++||+|+|+.+|+|+... .++..+|.++.|+|||||+|++.+...
T Consensus 134 ~~v~~~~~~d~~~-~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 134 RAIKQVLKCDVTQ-SQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp HHEEEEEECCTTS-SSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred hhheeEEEeeecc-CCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccc
Confidence 1 11 112111 122 22 799999999999965421 246789999999999999999976221
Q ss_pred -----HHHHHHHHHhcCcceee
Q 020011 287 -----FIDAVATIAKGMKWSCH 303 (332)
Q Consensus 287 -----~~~~i~~i~~~l~W~~~ 303 (332)
..+.+.+++...-+++.
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~~ 234 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTIE 234 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEEE
T ss_pred cccccCHHHHHHHHHHCCCEEE
Confidence 13466666665555543
No 96
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.23 E-value=9.7e-12 Score=107.57 Aligned_cols=140 Identities=12% Similarity=0.014 Sum_probs=79.5
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC----c--ccccccccccCCC---CCCccceeEeh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG----L--IGTYHDWCEAFST---YPRTYDLLHLD 250 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG----l--ig~~~d~~e~~~~---yp~sFDlVh~s 250 (332)
...+|||+|||+|.++.+|++... ..+++++|. +.+++.+.++- + .-...|..+.+.. ..++||+|+|+
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 357899999999999999988732 136788888 77887776552 1 1111222221111 12899999996
Q ss_pred hhh------ccccccCC-----------------HHHHHHHHHhhhcCCcE-EEEEcChhHHHHHHHHHh--cCcceeee
Q 020011 251 GLF------TAESHRCD-----------------MKFVLLEMDRILRPNGY-VIVRESSYFIDAVATIAK--GMKWSCHK 304 (332)
Q Consensus 251 ~vf------~h~~~~c~-----------------~~~iL~EmdRVLRPGG~-lii~d~~~~~~~i~~i~~--~l~W~~~~ 304 (332)
-.+ +|+..... +..++.++.|+|||||+ +++.-+....+.+.++++ ...|....
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~ 188 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVR 188 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEECC
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceEE
Confidence 333 22221100 16789999999999999 666665555667777776 55564322
Q ss_pred cccccccccceEEEEEec
Q 020011 305 EDTEYGVEKEKLLLCQKK 322 (332)
Q Consensus 305 ~~~e~~~~~e~~li~~K~ 322 (332)
. ..+-.+.+++++++|.
T Consensus 189 ~-~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 189 K-VKDLRGIDRVIAVTRE 205 (215)
T ss_dssp E-EECTTSCEEEEEEEEC
T ss_pred E-EEecCCCEEEEEEEEc
Confidence 2 2222356789988875
No 97
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.20 E-value=4.3e-11 Score=102.27 Aligned_cols=128 Identities=10% Similarity=0.003 Sum_probs=83.2
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc--cccc-ccccccCCC--CC-CccceeEehhh
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL--IGTY-HDWCEAFST--YP-RTYDLLHLDGL 252 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl--ig~~-~d~~e~~~~--yp-~sFDlVh~s~v 252 (332)
+...+|||+|||. +.+|. +.+++.+.++.- +-.. .|. +.+.. |+ ++||+|+|+.+
T Consensus 11 ~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~-~~~~~~~~~~~~fD~V~~~~~ 72 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGNEGRVSVENI-KQLLQSAHKESSFDIILSGLV 72 (176)
T ss_dssp CTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEG-GGGGGGCCCSSCEEEEEECCS
T ss_pred CCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcccCcEEEEech-hcCccccCCCCCEeEEEECCh
Confidence 3468899999996 12677 889999888741 1111 111 22222 47 99999999999
Q ss_pred hccc-cccCCHHHHHHHHHhhhcCCcEEEEEcChh----------HHHHHHHHHhcCcceeeeccccccc-c--------
Q 020011 253 FTAE-SHRCDMKFVLLEMDRILRPNGYVIVRESSY----------FIDAVATIAKGMKWSCHKEDTEYGV-E-------- 312 (332)
Q Consensus 253 f~h~-~~~c~~~~iL~EmdRVLRPGG~lii~d~~~----------~~~~i~~i~~~l~W~~~~~~~e~~~-~-------- 312 (332)
|+|+ + +...+|.|+.|+|||||+|++..+.. ..+.+.+.++.--+ +........+ .
T Consensus 73 l~~~~~---~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~~~~~~~~~~~~~~~ 148 (176)
T 2ld4_A 73 PGSTTL---HSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKELQREPLTPEEVQSVR 148 (176)
T ss_dssp TTCCCC---CCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEEEEECCCHHHHHHHH
T ss_pred hhhccc---CHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecCcccCCCHHHHHHHH
Confidence 9998 4 35799999999999999999976421 13455555553333 3322211100 0
Q ss_pred ----------cceEEEEEeccCCCCCC
Q 020011 313 ----------KEKLLLCQKKLWYSSNQ 329 (332)
Q Consensus 313 ----------~e~~li~~K~~w~~~~~ 329 (332)
.--+++++|+-|..+++
T Consensus 149 ~~~g~~~~~~~~~~~~a~Kp~~~~gs~ 175 (176)
T 2ld4_A 149 EHLGHESDNLLFVQITGKKPNFEVGSS 175 (176)
T ss_dssp HHTCCCCSSEEEEEEEEECCCSSCCSC
T ss_pred HHhcccCCceEEEEEeccCCcccccCC
Confidence 13378899998877654
No 98
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.19 E-value=5.7e-11 Score=110.66 Aligned_cols=101 Identities=13% Similarity=0.027 Sum_probs=75.3
Q ss_pred CCCeEEEecCcc---hHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhcC----cccc-ccccccc--C-------CCC
Q 020011 181 KIRNVMDMNTLY---GGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDRG----LIGT-YHDWCEA--F-------STY 240 (332)
Q Consensus 181 ~~r~VLD~GCG~---Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eRG----lig~-~~d~~e~--~-------~~y 240 (332)
.+++|||+|||+ |.++..+... +. .|+.+|. +.+++.+.++- -+.. ..|..+. . ..+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~---~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDA---RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCC---EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC
Confidence 468999999999 9887766543 33 5788888 89999888762 1111 1111110 0 135
Q ss_pred C-CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 241 P-RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 241 p-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+ .+||+|.++.+|+|+++. +...+|.|+.|+|||||+|++.+..
T Consensus 154 d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEec
Confidence 6 799999999999999864 7889999999999999999998854
No 99
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.18 E-value=1.3e-10 Score=103.09 Aligned_cols=111 Identities=7% Similarity=-0.033 Sum_probs=77.9
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCC-CC--CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFST-YP--RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~-yp--~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++.+|++.+. .|+++|. +++++.|.++ |+...+.-.+..+.. ++ .+||+|++...+
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~ 132 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLAGG---RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG 132 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC
T ss_pred CCEEEEecCCCCHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc
Confidence 57899999999999999998854 5788888 8888887765 443111111112111 22 689999987533
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCcceee
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKWSCH 303 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W~~~ 303 (332)
+.. ++.++.|+|||||.+++.... +...++.+..+...+++.
T Consensus 133 -------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~ 175 (204)
T 3njr_A 133 -------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLL 175 (204)
T ss_dssp -------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEE
T ss_pred -------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEE
Confidence 356 999999999999999998754 445666666665555543
No 100
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.17 E-value=1.4e-10 Score=97.74 Aligned_cols=109 Identities=7% Similarity=0.032 Sum_probs=81.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--cc-ccccccCCCCC-CccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TY-HDWCEAFSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~-~d~~e~~~~yp-~sFDlVh~s~v 252 (332)
..+|||+|||+|.++..|++.+. +++++|. +.+++.+.++ |+.. .+ .|. ..+++ ++||+|+++.+
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~---~~~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAKRCK---FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRA---EDVLDKLEFNKAFIGGT 109 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHTTSS---EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCH---HHHGGGCCCSEEEECSC
T ss_pred CCEEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCc---cccccCCCCcEEEECCc
Confidence 46899999999999999998544 5678888 7888877766 3311 11 121 22466 79999999976
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcC-hhHHHHHHHHHhcCcceeeec
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRES-SYFIDAVATIAKGMKWSCHKE 305 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~-~~~~~~i~~i~~~l~W~~~~~ 305 (332)
.++..++.++.|+ |||.+++... .+...++.+.++...|++...
T Consensus 110 -------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 -------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp -------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred -------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 3567899999999 9999999884 455677777777777877654
No 101
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.17 E-value=1.5e-10 Score=106.37 Aligned_cols=160 Identities=13% Similarity=-0.003 Sum_probs=96.7
Q ss_pred cchhhHHHHHHHHHhhcCCCCCCCCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Ccc--cc
Q 020011 158 HDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLI--GT 229 (332)
Q Consensus 158 ~d~~~W~~~v~~y~~~l~~l~~~~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Gli--g~ 229 (332)
...+.|...+..-..+++.+......+|||+|||+|.++..|+.. +. ..|+++|. +.++.++.++ |+. -.
T Consensus 57 ~~~~~~~~~~~ds~~~l~~~~~~~~~~vLDiG~G~G~~~i~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~ 134 (249)
T 3g89_A 57 GEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPE--LELVLVDATRKKVAFVERAIEVLGLKGARA 134 (249)
T ss_dssp CHHHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTTTTHHHHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHTCSSEEE
T ss_pred CHHHHhhceeeechhhhcccccCCCCEEEEEcCCCCHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhCCCceEE
Confidence 344556554443333333233334678999999999988888764 22 15678888 7788777665 442 22
Q ss_pred cccccccCCC---CCCccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh---hHHHHHHHHHhcCcceee
Q 020011 230 YHDWCEAFST---YPRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS---YFIDAVATIAKGMKWSCH 303 (332)
Q Consensus 230 ~~d~~e~~~~---yp~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~---~~~~~i~~i~~~l~W~~~ 303 (332)
++.-.+.+.. +.++||+|.|..+ .++..++.++.|+|||||.|++.... +.+..+...++.+.+...
T Consensus 135 ~~~d~~~~~~~~~~~~~fD~I~s~a~-------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~ 207 (249)
T 3g89_A 135 LWGRAEVLAREAGHREAYARAVARAV-------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLG 207 (249)
T ss_dssp EECCHHHHTTSTTTTTCEEEEEEESS-------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEE
T ss_pred EECcHHHhhcccccCCCceEEEECCc-------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEE
Confidence 2221222222 2389999999743 24678999999999999999986643 344555555666666653
Q ss_pred ecc--ccccc-ccceEEEEEeccCCC
Q 020011 304 KED--TEYGV-EKEKLLLCQKKLWYS 326 (332)
Q Consensus 304 ~~~--~e~~~-~~e~~li~~K~~w~~ 326 (332)
... +..+. ..-.+++.+|.-.++
T Consensus 208 ~~~~~~~p~~~~~R~l~~~~k~~~t~ 233 (249)
T 3g89_A 208 EVLALQLPLSGEARHLVVLEKTAPTP 233 (249)
T ss_dssp EEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred EEEEeeCCCCCCcEEEEEEEeCCCCC
Confidence 321 11122 334566667755443
No 102
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.16 E-value=1.1e-10 Score=103.21 Aligned_cols=120 Identities=15% Similarity=0.118 Sum_probs=79.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccc--ccc-ccccccCC-CCC-CccceeEehh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLI--GTY-HDWCEAFS-TYP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gli--g~~-~d~~e~~~-~yp-~sFDlVh~s~ 251 (332)
..+|||+|||+|.++..|++..- ..+++++|. +.++..|.++ |+. -.+ .|. ..+. .++ ++||+|+++.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDG-SDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCS-SCGGGTSCTTCCSEEEEES
T ss_pred CCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCH-HHHHhhcCCCCCCEEEEEC
Confidence 46799999999999999987631 126788888 8888877664 331 111 221 1122 266 8999999985
Q ss_pred hhccc-----cccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCcceee
Q 020011 252 LFTAE-----SHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKWSCH 303 (332)
Q Consensus 252 vf~h~-----~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W~~~ 303 (332)
...+. +.+-....++.++.|+|||||.|++.... +..+.+.++.....|...
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeee
Confidence 43221 11112367999999999999999997644 555666666555455543
No 103
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.16 E-value=8e-11 Score=107.48 Aligned_cols=121 Identities=10% Similarity=0.077 Sum_probs=86.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccc---ccc-ccccccCCCCC-CccceeEehh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLI---GTY-HDWCEAFSTYP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gli---g~~-~d~~e~~~~yp-~sFDlVh~s~ 251 (332)
..+|||+|||+|.++..|++++.. .|+++|. +.+++.|.++ |+. -.+ .|..+....++ ++||+|.|+-
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 568999999999999999998642 6788898 8888877665 332 111 22222222366 9999999974
Q ss_pred hhccc-----c------------ccCCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCcceeee
Q 020011 252 LFTAE-----S------------HRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 252 vf~h~-----~------------~~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~~~ 304 (332)
.+.+. . ..+.+..++.++.|+|||||.+++.-+.+....+...++...|....
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEE
Confidence 43221 1 01335679999999999999999988887778888888877777543
No 104
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.16 E-value=4.2e-11 Score=114.20 Aligned_cols=103 Identities=23% Similarity=0.209 Sum_probs=73.4
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----Ccccccccccc-cCCCCCCccceeEehhhhc
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIGTYHDWCE-AFSTYPRTYDLLHLDGLFT 254 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig~~~d~~e-~~~~yp~sFDlVh~s~vf~ 254 (332)
....+|||+|||+|.++..|++..- ...++.+|.+.+++.+.++ |+...+.-.+. .+.++|..||+|+++++|+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~ 259 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLL 259 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESCGG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEecccc
Confidence 3467899999999999999987631 1145666666677776654 43211111111 2335675699999999999
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
|+++ .....+|.++.|+|||||++++.+.
T Consensus 260 ~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 260 NWSD-EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GSCH-HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCH-HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9874 2345899999999999999999876
No 105
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.16 E-value=2.1e-10 Score=104.57 Aligned_cols=132 Identities=14% Similarity=0.088 Sum_probs=86.2
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Cccc---c-cccccccCCCCC--Ccccee
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GLIG---T-YHDWCEAFSTYP--RTYDLL 247 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Glig---~-~~d~~e~~~~yp--~sFDlV 247 (332)
..+|||+|||+|.++.+|++. +. .|+++|. +.+++.|.++ |+.. . ..|..+.+..++ .+||+|
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADG---QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 578999999999999999986 33 5678888 8888877766 4421 1 122212122233 499999
Q ss_pred EehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChh------------HHHHHHH----HHhcCcceeeeccccccc
Q 020011 248 HLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY------------FIDAVAT----IAKGMKWSCHKEDTEYGV 311 (332)
Q Consensus 248 h~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~------------~~~~i~~----i~~~l~W~~~~~~~e~~~ 311 (332)
++.... .....++.++.|+|||||+|++.+... ....+++ +...-++......+-..+
T Consensus 141 ~~d~~~------~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~ 214 (248)
T 3tfw_A 141 FIDADK------PNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGTK 214 (248)
T ss_dssp EECSCG------GGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECSTT
T ss_pred EECCch------HHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCCC
Confidence 987532 245679999999999999999976431 1223333 344556666544222112
Q ss_pred ccceEEEEEec
Q 020011 312 EKEKLLLCQKK 322 (332)
Q Consensus 312 ~~e~~li~~K~ 322 (332)
..+++.+++|+
T Consensus 215 ~~DG~~i~~~~ 225 (248)
T 3tfw_A 215 GWDGFTLAWVN 225 (248)
T ss_dssp CSEEEEEEEEC
T ss_pred CCCeeEEEEEe
Confidence 45789999886
No 106
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.15 E-value=2.3e-11 Score=105.27 Aligned_cols=124 Identities=13% Similarity=0.104 Sum_probs=81.9
Q ss_pred cccchhhHHHHHHHHHhhcCCCCCCCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc--cc
Q 020011 156 FKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL--IG 228 (332)
Q Consensus 156 F~~d~~~W~~~v~~y~~~l~~l~~~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl--ig 228 (332)
|...+......+..+...... ....+|||+|||+|.++.++++++.. .|+++|. +.+++.+.++ |+ +-
T Consensus 22 ~rp~~~~~~~~l~~~l~~~~~---~~~~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~ 96 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTARRD---LTGLAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGAT 96 (189)
T ss_dssp C---CHHHHHHHHHHHHHHSC---CTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEE
T ss_pred CccCcHHHHHHHHHHHHhccC---CCCCEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceE
Confidence 444555666655554432111 13568999999999999988877642 4678888 8888877765 33 11
Q ss_pred cc-ccccccCCCCC-CccceeEehhhhccccccCCHHHHHHHHHh--hhcCCcEEEEEcChh
Q 020011 229 TY-HDWCEAFSTYP-RTYDLLHLDGLFTAESHRCDMKFVLLEMDR--ILRPNGYVIVRESSY 286 (332)
Q Consensus 229 ~~-~d~~e~~~~yp-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdR--VLRPGG~lii~d~~~ 286 (332)
.+ .|..+....++ ++||+|.++..+++.. .+...++.++.| +|||||.|++.....
T Consensus 97 ~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~--~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 97 LRRGAVAAVVAAGTTSPVDLVLADPPYNVDS--ADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp EEESCHHHHHHHCCSSCCSEEEECCCTTSCH--HHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred EEEccHHHHHhhccCCCccEEEECCCCCcch--hhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 11 11111112255 8999999998877642 246789999999 999999999987543
No 107
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.15 E-value=9.2e-11 Score=104.56 Aligned_cols=118 Identities=8% Similarity=0.053 Sum_probs=76.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--cc-ccccccCC-CCC-CccceeEehh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TY-HDWCEAFS-TYP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~-~d~~e~~~-~yp-~sFDlVh~s~ 251 (332)
..+|||+|||+|.++.+|++..- ..+++++|. +.++..|.++ |+.. .+ .|.. .+. .++ ++||.|+++.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~-~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDAD-TLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGG-GHHHHCCTTSCCEEEEES
T ss_pred CceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHH-HHHhhcCcCCcCEEEEEC
Confidence 45799999999999999987621 126788999 8888877764 4421 11 2211 121 266 8999998763
Q ss_pred hhc-----cccccCCHHHHHHHHHhhhcCCcEEEEEc-ChhHHHHHHHHHhcCcce
Q 020011 252 LFT-----AESHRCDMKFVLLEMDRILRPNGYVIVRE-SSYFIDAVATIAKGMKWS 301 (332)
Q Consensus 252 vf~-----h~~~~c~~~~iL~EmdRVLRPGG~lii~d-~~~~~~~i~~i~~~l~W~ 301 (332)
... |...+-....+|.++.|+|||||.|++.. .....+.+.+......|.
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~ 172 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLL 172 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCE
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 322 11112223679999999999999999875 444455555554443444
No 108
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.15 E-value=1.9e-10 Score=98.92 Aligned_cols=128 Identities=12% Similarity=0.100 Sum_probs=89.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCC-CccceeEehhhhcccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~~~ 259 (332)
..+|||+|||+|.++.+|++++ .|+++|. +.+++. ...+.-... ..+.+++ ++||+|.|+..+++..+.
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~~~~~~~---d~~~~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRGGNLVRA---DLLCSINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSSSCEEEC---STTTTBCGGGCSEEEECCCCBTTCCC
T ss_pred CCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccCCeEEEC---ChhhhcccCCCCEEEECCCCccCCcc
Confidence 3489999999999999999987 6788888 878876 222211112 2233566 999999999888765432
Q ss_pred ------CCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCcceeeecccccccccceEEEEE
Q 020011 260 ------CDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQ 320 (332)
Q Consensus 260 ------c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W~~~~~~~e~~~~~e~~li~~ 320 (332)
.+...++.++.|.| |||.+++.... ...+++.++++...|+........ ...+++++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~-~~~e~~~~~~ 160 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRK-ILGETVYIIK 160 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEE-CSSSEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeec-cCCceEEEEE
Confidence 12346889999999 99999997744 446778888888788765543222 1345555544
No 109
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.15 E-value=3e-11 Score=114.47 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=74.2
Q ss_pred cCCCCCCC-CCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----Cccc----ccccccccCCC-CCCc
Q 020011 174 LPALGTDK-IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIG----TYHDWCEAFST-YPRT 243 (332)
Q Consensus 174 l~~l~~~~-~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig----~~~d~~e~~~~-yp~s 243 (332)
+..+.... ..+|||+|||+|.++..|+++.-- ..++.+|.+.+++.+.++ ++.. ..+|..+. .+ .|..
T Consensus 171 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~ 248 (352)
T 3mcz_A 171 VSELGVFARARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDA-RNFEGGA 248 (352)
T ss_dssp HHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTT-CEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCG-GGGTTCC
T ss_pred HHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccC-cccCCCC
Confidence 33343334 789999999999999999875211 245556666677666554 4322 11221111 11 4578
Q ss_pred cceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 244 YDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 244 FDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
||+|+++++|+|+++ .+...+|.++.|+|||||.|++.+
T Consensus 249 ~D~v~~~~vlh~~~~-~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 249 ADVVMLNDCLHYFDA-REAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EEEEEEESCGGGSCH-HHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEEecccccCCH-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999999999874 346789999999999999999977
No 110
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.14 E-value=3.7e-11 Score=114.53 Aligned_cols=101 Identities=20% Similarity=0.231 Sum_probs=70.4
Q ss_pred CCCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----Ccccccccc-cccCCCCCCccceeEehhhh
Q 020011 179 TDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIGTYHDW-CEAFSTYPRTYDLLHLDGLF 253 (332)
Q Consensus 179 ~~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig~~~d~-~e~~~~yp~sFDlVh~s~vf 253 (332)
.....+|||+|||+|.++..|+++.-- ..++.+|.+..+. .++ ++...+.-. ...+.++| +||+|+++++|
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p-~~D~v~~~~vl 257 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPG-LQGVLLDRAEVVA--RHRLDAPDVAGRWKVVEGDFLREVP-HADVHVLKRIL 257 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTT-EEEEEEECHHHHT--TCCCCCGGGTTSEEEEECCTTTCCC-CCSEEEEESCG
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCC-CEEEEecCHHHhh--cccccccCCCCCeEEEecCCCCCCC-CCcEEEEehhc
Confidence 344789999999999999999875321 2456677654443 111 221111101 11235677 99999999999
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+|+++ .+...+|.++.|+|||||.|+|.+.
T Consensus 258 h~~~d-~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 258 HNWGD-EDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp GGSCH-HHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred cCCCH-HHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 99875 2346899999999999999999874
No 111
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.14 E-value=7.6e-11 Score=112.53 Aligned_cols=102 Identities=10% Similarity=0.152 Sum_probs=71.5
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----CcccccccccccCCCCC-CccceeEehhhhc
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIGTYHDWCEAFSTYP-RTYDLLHLDGLFT 254 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig~~~d~~e~~~~yp-~sFDlVh~s~vf~ 254 (332)
....+|||+|||+|.++..|+++.- ...++.+|.+.+++.+.++ |+.+.+.-.+..+...| ..+|+|+++++|+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vlh 267 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILY 267 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGG
T ss_pred CCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechhc
Confidence 3467999999999999999987621 1145566666677777654 44321111111222223 3449999999999
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
|+++ .....+|.++.|+|||||.+++.+
T Consensus 268 ~~~d-~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 268 SANE-QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp GSCH-HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred cCCH-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9874 346789999999999999998877
No 112
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.14 E-value=1.6e-10 Score=105.93 Aligned_cols=113 Identities=16% Similarity=0.068 Sum_probs=82.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccc-cccccccccCCCCC-CccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLI-GTYHDWCEAFSTYP-RTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gli-g~~~d~~e~~~~yp-~sFDlVh~s~vf~ 254 (332)
..+|||+|||+|.++.++++.+. .|+++|. +.+++.+.++ |+. -.++ +.....++ ++||+|+|+.+++
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~--~d~~~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLE--GSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEE--SCHHHHGGGCCEEEEEEECCHH
T ss_pred CCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEE--CChhhcCcCCCCCEEEECCcHH
Confidence 46899999999999999998876 6788888 8888887765 331 1111 01111255 8999999986554
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCcceeeec
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKWSCHKE 305 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W~~~~~ 305 (332)
+ +..++.++.|+|||||++++++.. ...+.+.+.++...+++...
T Consensus 196 ~------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 196 L------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp H------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred H------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEE
Confidence 4 457999999999999999998743 34667777777767776544
No 113
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.14 E-value=1e-10 Score=112.59 Aligned_cols=105 Identities=15% Similarity=0.160 Sum_probs=74.7
Q ss_pred CCCCCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----Ccccccccc-cccCCCCCCccceeEehh
Q 020011 177 LGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIGTYHDW-CEAFSTYPRTYDLLHLDG 251 (332)
Q Consensus 177 l~~~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig~~~d~-~e~~~~yp~sFDlVh~s~ 251 (332)
+......+|||+|||+|.++..|+++.- ...++.+|.+.+++.+.++ |+...+.-. ...+.++|..||+|++.+
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~ 276 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKH 276 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEEES
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEhhh
Confidence 3334578999999999999999988621 1145666766677766653 432211111 112345677899999999
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+|+|+++ .....+|.++.|+|||||+|+|.+
T Consensus 277 vlh~~~d-~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 277 VLHDWDD-DDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp CGGGSCH-HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred hhccCCH-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999874 334579999999999999999976
No 114
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.13 E-value=4.1e-11 Score=112.73 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=70.7
Q ss_pred CeEEEecCcchHHHHHHhcC--CCeEEEEeecCchhhHHHHHhc----Cc---cc-ccccccccCCCCCCccceeEehhh
Q 020011 183 RNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYAANTLAVVYDR----GL---IG-TYHDWCEAFSTYPRTYDLLHLDGL 252 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~~~~l~~a~eR----Gl---ig-~~~d~~e~~~~yp~sFDlVh~s~v 252 (332)
.+|||+|||+|.++..|+++ +. .++.+|.+.+++.+.++ |+ +- ..+| .+.++|.+||+|+++++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d---~~~~~~~~~D~v~~~~v 242 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSA---RGVMLDREGSLGVARDNLSSLLAGERVSLVGGD---MLQEVPSNGDIYLLSRI 242 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTC---EEEEEECTTCTHHHHHHTHHHHHTTSEEEEESC---TTTCCCSSCSEEEEESC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCC---EEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCC---CCCCCCCCCCEEEEchh
Confidence 79999999999999999875 33 45556666666666554 22 11 1122 23356788999999999
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
|+|+++ .....+|.++.|+|||||++++.+.
T Consensus 243 l~~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 243 IGDLDE-AASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp GGGCCH-HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred ccCCCH-HHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 999864 3456899999999999999999863
No 115
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.13 E-value=1.1e-10 Score=96.88 Aligned_cols=133 Identities=12% Similarity=0.065 Sum_probs=77.8
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCchhhHHHHHhcCcccccccccccCCC--------CC-CccceeEehh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYAANTLAVVYDRGLIGTYHDWCEAFST--------YP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~~~~l~~a~eRGlig~~~d~~e~~~~--------yp-~sFDlVh~s~ 251 (332)
..+|||+|||+|.++.+|++. +.- ..++++|...+++. ..+.-...|..+ .+ ++ ++||+|+++.
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~-~~v~~~D~~~~~~~---~~~~~~~~d~~~--~~~~~~~~~~~~~~~~D~i~~~~ 96 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGK-GRIIACDLLPMDPI---VGVDFLQGDFRD--ELVMKALLERVGDSKVQVVMSDM 96 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTT-CEEEEEESSCCCCC---TTEEEEESCTTS--HHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCC-CeEEEEECcccccc---CcEEEEEccccc--chhhhhhhccCCCCceeEEEECC
Confidence 468999999999999999876 210 14455555113322 111111112111 12 56 8999999998
Q ss_pred hhcccccc--CC------HHHHHHHHHhhhcCCcEEEEEcChh-HHHHHHHHHhcCcceeeecccc--ccc-ccceEEEE
Q 020011 252 LFTAESHR--CD------MKFVLLEMDRILRPNGYVIVRESSY-FIDAVATIAKGMKWSCHKEDTE--YGV-EKEKLLLC 319 (332)
Q Consensus 252 vf~h~~~~--c~------~~~iL~EmdRVLRPGG~lii~d~~~-~~~~i~~i~~~l~W~~~~~~~e--~~~-~~e~~li~ 319 (332)
++++.... .. ...++.++.|+|||||.+++..... ....+....+. .|........ ... ..|.++++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 175 (180)
T 1ej0_A 97 APNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSREVYIVA 175 (180)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCCEEEEEE
T ss_pred CccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCceEEEEE
Confidence 88765421 00 1579999999999999999976432 23333333333 3544332111 112 56778887
Q ss_pred Ee
Q 020011 320 QK 321 (332)
Q Consensus 320 ~K 321 (332)
++
T Consensus 176 ~~ 177 (180)
T 1ej0_A 176 TG 177 (180)
T ss_dssp EE
T ss_pred cc
Confidence 75
No 116
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.13 E-value=7.2e-11 Score=103.22 Aligned_cols=91 Identities=14% Similarity=0.096 Sum_probs=69.0
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--ccccccccCCC-CC-CccceeEehh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TYHDWCEAFST-YP-RTYDLLHLDG 251 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~~d~~e~~~~-yp-~sFDlVh~s~ 251 (332)
...+|||+|||+|.++..|++.+. .|+++|. +.+++.+.++ |+.. ..+ ...... .+ ++||+|+++.
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~--~d~~~~~~~~~~~D~i~~~~ 151 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLVQ---HVCSVERIKGLQWQARRRLKNLDLHNVSTRH--GDGWQGWQARAPFDAIIVTA 151 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEE--SCGGGCCGGGCCEEEEEESS
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCceEEEE--CCcccCCccCCCccEEEEcc
Confidence 357899999999999999998754 5677888 8888888765 3321 111 111122 23 8999999999
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+++|+++ ++.|+|||||++++..+.
T Consensus 152 ~~~~~~~---------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 152 APPEIPT---------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp BCSSCCT---------HHHHTEEEEEEEEEEECS
T ss_pred chhhhhH---------HHHHhcccCcEEEEEEcC
Confidence 9999863 689999999999998776
No 117
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.13 E-value=1.1e-10 Score=98.92 Aligned_cols=114 Identities=12% Similarity=0.060 Sum_probs=80.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccccccccccc-CCCCC--CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEA-FSTYP--RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~-~~~yp--~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++..|++... .++++|. +.+++.+.++ |+...+.-.+.. ..+++ .+||+|+++.++
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~ 110 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRVR---RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSG 110 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCCT
T ss_pred CCEEEEECCCCCHHHHHHHHhcC---EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECCch
Confidence 56899999999999999998873 6778888 7888877764 331111100111 11233 689999999877
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCcceeee
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W~~~~ 304 (332)
+| +..++.++.|+|+|||.+++.... ....++.++++...|++..
T Consensus 111 ~~------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 111 GE------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp TC------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEE
T ss_pred HH------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEE
Confidence 54 468999999999999999998754 4466677777666665443
No 118
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.12 E-value=1.6e-10 Score=105.29 Aligned_cols=114 Identities=15% Similarity=0.023 Sum_probs=72.3
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----------Cccc--ccccccccCCC--CC-Cccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----------GLIG--TYHDWCEAFST--YP-RTYD 245 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----------Glig--~~~d~~e~~~~--yp-~sFD 245 (332)
..+|||+|||+|.++..|++..-- .+++++|. +.++..|.++ ++.. .++.-+..+.+ |+ ++||
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~-~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPD-TLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTT-SEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCeEEEEccCCcHHHHHHHHHCCC-CeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 467999999999999999886311 26788888 8888877643 2211 11111111233 67 9999
Q ss_pred eeEehhhhccc-----cccCCHHHHHHHHHhhhcCCcEEEEEc-ChhHHHHHHHHHh
Q 020011 246 LLHLDGLFTAE-----SHRCDMKFVLLEMDRILRPNGYVIVRE-SSYFIDAVATIAK 296 (332)
Q Consensus 246 lVh~s~vf~h~-----~~~c~~~~iL~EmdRVLRPGG~lii~d-~~~~~~~i~~i~~ 296 (332)
+|+++..-.+. ..+.....+|.++.|+|||||.|++.. .....+.+.+.+.
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~ 182 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFE 182 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 99875322211 111122579999999999999999864 4455555555444
No 119
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.11 E-value=4.8e-10 Score=100.85 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=66.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccc---cccccccccCCC-C-CCccceeEehh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLI---GTYHDWCEAFST-Y-PRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gli---g~~~d~~e~~~~-y-p~sFDlVh~s~ 251 (332)
..+|||+|||+|.++.+|++... ...|+++|. +.+++.|.++ |+. -.++.-+..+.+ + +++||+|++..
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 56899999999999999998421 126778888 7888877664 432 111111111222 2 48999999874
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. .....++.++.|+|||||+|++.+
T Consensus 151 ~~------~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 151 AK------AQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TS------SSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred cH------HHHHHHHHHHHHhcCCCeEEEEee
Confidence 32 356789999999999999999943
No 120
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.11 E-value=8.8e-11 Score=109.95 Aligned_cols=100 Identities=24% Similarity=0.334 Sum_probs=72.4
Q ss_pred CCCeEEEecCcchHHHHHHhcC--CCeEEEEeecCchhhHHHHHhc----Cccccccccccc-C-CCCCCccceeEehhh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYAANTLAVVYDR----GLIGTYHDWCEA-F-STYPRTYDLLHLDGL 252 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~~~~l~~a~eR----Glig~~~d~~e~-~-~~yp~sFDlVh~s~v 252 (332)
...+|||+|||+|.++..|+++ +. .++.+|.+.+++.+.++ |+...+.-.+.. + .++|..||+|+|+++
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~ 241 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNA---EIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNF 241 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTC---EEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCC---eEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcch
Confidence 4679999999999999999876 33 56667766666666654 432211111111 2 246656999999999
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
|+|+++ .+...+|.++.|+|||||++++.+.
T Consensus 242 l~~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 242 LHHFDV-ATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp GGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hccCCH-HHHHHHHHHHHHhCCCCcEEEEEee
Confidence 999863 3467899999999999999999763
No 121
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.11 E-value=5.3e-11 Score=106.20 Aligned_cols=88 Identities=10% Similarity=-0.002 Sum_probs=67.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-cc-ccccccccCCCCC--CccceeEehhhhccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-IG-TYHDWCEAFSTYP--RTYDLLHLDGLFTAE 256 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-ig-~~~d~~e~~~~yp--~sFDlVh~s~vf~h~ 256 (332)
..+|||+|||+|.++.+|++.+. .|+++|. +.+++.+.++.. +. ...|+.+. .+++ ++||+|+|+.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~-~~~~~~~~fD~v~~~~----- 119 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGE-LPAGLGAPFGLIVSRR----- 119 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSS-CCTTCCCCEEEEEEES-----
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhc-cCCcCCCCEEEEEeCC-----
Confidence 46899999999999999999865 6788888 899999988732 11 11222222 3444 7999999981
Q ss_pred cccCCHHHHHHHHHhhhcCCcEEEEE
Q 020011 257 SHRCDMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 257 ~~~c~~~~iL~EmdRVLRPGG~lii~ 282 (332)
+...+|.++.|+|||||.++..
T Consensus 120 ----~~~~~l~~~~~~LkpgG~l~~~ 141 (226)
T 3m33_A 120 ----GPTSVILRLPELAAPDAHFLYV 141 (226)
T ss_dssp ----CCSGGGGGHHHHEEEEEEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCcEEEEe
Confidence 3447999999999999999944
No 122
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.10 E-value=2.1e-10 Score=105.72 Aligned_cols=111 Identities=7% Similarity=0.071 Sum_probs=77.1
Q ss_pred CCCCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc-----CcccccccccccCCCCC-CccceeEe
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR-----GLIGTYHDWCEAFSTYP-RTYDLLHL 249 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR-----Glig~~~d~~e~~~~yp-~sFDlVh~ 249 (332)
....+|||+|||+|.++..|++. +. .|+++|. +.+++.+.++ |+....-..+....+++ ++||+|.+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~ 185 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKG---TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIA 185 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSS---EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCC---EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEEE
Confidence 34678999999999999999876 33 5788888 8888887765 42111000112233566 88999998
Q ss_pred hhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChh-HHHHHHHHHhcCcce
Q 020011 250 DGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY-FIDAVATIAKGMKWS 301 (332)
Q Consensus 250 s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~-~~~~i~~i~~~l~W~ 301 (332)
+ .+ +...+|.++.|+|||||.+++..+.. ....+.+.++...+.
T Consensus 186 ~-----~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~ 230 (275)
T 1yb2_A 186 D-----IP---DPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMH 230 (275)
T ss_dssp C-----CS---CGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEE
T ss_pred c-----Cc---CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCe
Confidence 3 33 34579999999999999999998765 455555554444343
No 123
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.10 E-value=7.8e-11 Score=111.95 Aligned_cols=104 Identities=23% Similarity=0.306 Sum_probs=72.4
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----Ccccccccc-cccCCCCCCccceeEehhhhc
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIGTYHDW-CEAFSTYPRTYDLLHLDGLFT 254 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig~~~d~-~e~~~~yp~sFDlVh~s~vf~ 254 (332)
....+|||+|||+|.++..|+++..- ..++.+|.+.+++.+.++ |+...+.-. +..+.++|..||+|+++++|+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~ 260 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPH-VSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLL 260 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESCGG
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCC-CEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEccccc
Confidence 34678999999999999999876321 144555655566666553 432111111 112335675699999999999
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
|+++ .+...+|.++.|+|||||++++.+..
T Consensus 261 ~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 261 NWPD-HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GSCH-HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCH-HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9874 23468999999999999999998644
No 124
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.09 E-value=1.5e-10 Score=104.32 Aligned_cols=114 Identities=11% Similarity=0.058 Sum_probs=74.1
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--cc-ccccccCC-CCC-CccceeEehh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TY-HDWCEAFS-TYP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~-~d~~e~~~-~yp-~sFDlVh~s~ 251 (332)
..+|||+|||+|.++..|++..-- .+|+++|. +.+++.|.++ |+.. .+ .|..+.+. .++ ++||+|++..
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~-~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPE-QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHCCC-CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 468999999999999999875321 26788888 8888776654 4422 11 11111111 267 9999999873
Q ss_pred hhccccc-----cCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHh
Q 020011 252 LFTAESH-----RCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAK 296 (332)
Q Consensus 252 vf~h~~~-----~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~ 296 (332)
...+... +-....++.++.|+|||||.|++.... ...+.+.+++.
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~ 164 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMS 164 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Confidence 3322111 111236999999999999999987654 44555555543
No 125
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.09 E-value=4.1e-10 Score=109.32 Aligned_cols=100 Identities=17% Similarity=0.099 Sum_probs=68.4
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHh----cCccc---ccccccccCCCCCCccceeEehhhh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYD----RGLIG---TYHDWCEAFSTYPRTYDLLHLDGLF 253 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~e----RGlig---~~~d~~e~~~~yp~sFDlVh~s~vf 253 (332)
...+|||+|||+|.++..|++.+.- .|+++|..++++.|.+ .|+.. .++.-.+. .++|++||+|+|..+.
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~~--~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGAR--KVYAVEATKMADHARALVKANNLDHIVEVIEGSVED-ISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCS--EEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGG-CCCSSCEEEEEECCCB
T ss_pred CCCEEEEeccCcCHHHHHHHhcCCC--EEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhh-cCcCCcceEEEEcChh
Confidence 4578999999999999999998751 3445554345544443 35432 22111111 2355899999997655
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+++.....+..++.+++|+|||||.+++..
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 555444567889999999999999998855
No 126
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.09 E-value=2.6e-10 Score=100.74 Aligned_cols=94 Identities=15% Similarity=0.120 Sum_probs=66.5
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Cccc---cc-ccccccCCCCC----Cccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GLIG---TY-HDWCEAFSTYP----RTYD 245 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~-~d~~e~~~~yp----~sFD 245 (332)
..+|||+|||+|.++.+|++. +. .|+++|. +.+++.|.++ |+.. .. .|..+.+..++ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGG---RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 468999999999999999987 43 5678887 7788777654 4422 11 11111111222 5799
Q ss_pred eeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 246 LLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 246 lVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+|++....+ ....++.++.|+|||||++++.+.
T Consensus 136 ~v~~d~~~~------~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 136 FIFIDADKQ------NNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEEECSCGG------GHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEEcCCcH------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999885533 345799999999999999998764
No 127
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.09 E-value=1.2e-10 Score=112.29 Aligned_cols=99 Identities=16% Similarity=0.142 Sum_probs=72.1
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhcCcccc-cccccccCCCCCCccceeEehhhhccccc
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGT-YHDWCEAFSTYPRTYDLLHLDGLFTAESH 258 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eRGlig~-~~d~~e~~~~yp~sFDlVh~s~vf~h~~~ 258 (332)
....+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.++.-+-. .+| .+.++|.. |+|+++++|||+++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~d---~~~~~p~~-D~v~~~~vlh~~~~ 276 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPS-INAINFDLPHVIQDAPAFSGVEHLGGD---MFDGVPKG-DAIFIKWICHDWSD 276 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCCTTEEEEECC---TTTCCCCC-SEEEEESCGGGBCH
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEehHHHHHhhhhcCCCEEEecC---CCCCCCCC-CEEEEechhhcCCH
Confidence 45789999999999999999875211 14566776667766654322211 122 23467744 99999999999975
Q ss_pred cCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 259 RCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 259 ~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
.+...+|.++.|+|||||.|+|.+.
T Consensus 277 -~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 277 -EHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp -HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred -HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 3456899999999999999999773
No 128
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.09 E-value=1.1e-10 Score=103.60 Aligned_cols=92 Identities=15% Similarity=0.005 Sum_probs=68.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc----cc-ccccccccCCCCCCccceeEehhhhcc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL----IG-TYHDWCEAFSTYPRTYDLLHLDGLFTA 255 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl----ig-~~~d~~e~~~~yp~sFDlVh~s~vf~h 255 (332)
..+|||+|||+|.++..|++.+. .++++|. +.+++.+.++.- +- ...|..+ ..+.+++||+|+++.+++|
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIVD---KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL-GYEEEKPYDRVVVWATAPT 146 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG-CCGGGCCEEEEEESSBBSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHcC---EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccc-ccccCCCccEEEECCcHHH
Confidence 56899999999999999998763 6788888 888888887621 11 1122111 1111289999999999998
Q ss_pred ccccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 256 ESHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 256 ~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
+. .++.|+|||||.+++..+..
T Consensus 147 ~~---------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 147 LL---------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CC---------HHHHHTEEEEEEEEEEECSS
T ss_pred HH---------HHHHHHcCCCcEEEEEEcCC
Confidence 75 37899999999999987654
No 129
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.08 E-value=4.1e-11 Score=115.25 Aligned_cols=97 Identities=20% Similarity=0.163 Sum_probs=70.0
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhcCccc-ccccccccCCCCCCccceeEehhhhcccccc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIG-TYHDWCEAFSTYPRTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eRGlig-~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~~ 259 (332)
...+|||+|||+|.++.+|+++... +.++.+|.+.+++.+.+..-+- ..+| .+.++|. ||+|+++++|+|+++
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~~~~~~~a~~~~~v~~~~~d---~~~~~~~-~D~v~~~~~lh~~~d- 282 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPL-IKGINFDLPQVIENAPPLSGIEHVGGD---MFASVPQ-GDAMILKAVCHNWSD- 282 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCCTTEEEEECC---TTTCCCC-EEEEEEESSGGGSCH-
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCC-CeEEEeChHHHHHhhhhcCCCEEEeCC---cccCCCC-CCEEEEecccccCCH-
Confidence 4679999999999999999886321 1456666666776654321111 1122 2334556 999999999999975
Q ss_pred CCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 260 CDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 260 c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.....+|.++.|+|||||.|+|.+
T Consensus 283 ~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 283 EKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 234589999999999999999986
No 130
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.08 E-value=2e-10 Score=101.49 Aligned_cols=127 Identities=18% Similarity=0.152 Sum_probs=82.4
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Cccc---cc-ccccccCCCCC-----Ccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GLIG---TY-HDWCEAFSTYP-----RTY 244 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~-~d~~e~~~~yp-----~sF 244 (332)
..+|||+|||+|.++.+|++. +. .|+++|. +.+++.+.++ |+.. .+ .|..+.+..++ ++|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDG---TLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 468999999999999999986 33 5678888 7788777665 4321 11 11111111122 789
Q ss_pred ceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChh------------HHHHHHHH----HhcCcceeeecccc
Q 020011 245 DLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY------------FIDAVATI----AKGMKWSCHKEDTE 308 (332)
Q Consensus 245 DlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~------------~~~~i~~i----~~~l~W~~~~~~~e 308 (332)
|+|++.... .....++.++.|+|||||+|++.+... ....++++ ...-++.....
T Consensus 142 D~v~~~~~~------~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--- 212 (225)
T 3tr6_A 142 DLIYIDADK------ANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILI--- 212 (225)
T ss_dssp EEEEECSCG------GGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE---
T ss_pred cEEEECCCH------HHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEE---
Confidence 999976432 245679999999999999999977431 12233333 33444555544
Q ss_pred cccccceEEEEEec
Q 020011 309 YGVEKEKLLLCQKK 322 (332)
Q Consensus 309 ~~~~~e~~li~~K~ 322 (332)
+...++++++|.
T Consensus 213 --p~~dG~~~~~k~ 224 (225)
T 3tr6_A 213 --PIGDGLTLARKK 224 (225)
T ss_dssp --CSTTCEEEEEEC
T ss_pred --EcCCccEEEEEC
Confidence 224568888874
No 131
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.08 E-value=2.7e-10 Score=109.46 Aligned_cols=99 Identities=14% Similarity=0.093 Sum_probs=70.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----Cccc---ccccccccCCCCC-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIG---TYHDWCEAFSTYP-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig---~~~d~~e~~~~yp-~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++..|++.+.. .|+++|..+++..|.++ |+.. .++.-.+. .++| ++||+|+|..+.
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~--~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGAR--KVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEE-VELPVEKVDIIISEWMG 143 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCS--EEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTT-CCCSSSCEEEEEECCCB
T ss_pred CCEEEEEeccchHHHHHHHHCCCC--EEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHH-ccCCCCceEEEEEcccc
Confidence 568999999999999999998651 45566663366555543 5432 12111112 2577 999999998776
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+++.....+..++.++.|+|||||.++...
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 665445678899999999999999997543
No 132
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.08 E-value=4.2e-10 Score=104.61 Aligned_cols=114 Identities=10% Similarity=0.054 Sum_probs=83.3
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCC--CCccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTY--PRTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~y--p~sFDlVh~s~vf~ 254 (332)
..+|||+|||+|+|+.++++.+.- .|+++|. +.+++.+.++ |+...+.-.+.....+ +++||+|+++..
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p-- 201 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV-- 201 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC--
T ss_pred CCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc--
Confidence 468999999999999999987652 4788888 8888887765 4432111112222222 489999999633
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcCh-------hHHHHHHHHHhcCcceeee
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRESS-------YFIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-------~~~~~i~~i~~~l~W~~~~ 304 (332)
.....++.++.|+|||||++++.+.. +..+.+.+.++...|++..
T Consensus 202 -----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 -----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp -----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred -----hhHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 23357999999999999999996643 4567888888888888766
No 133
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.07 E-value=3.3e-10 Score=102.06 Aligned_cols=107 Identities=12% Similarity=0.115 Sum_probs=75.8
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Ccccccccc-cccCCCCC-CccceeEehh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDW-CEAFSTYP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~-~e~~~~yp-~sFDlVh~s~ 251 (332)
..+|||+|||+|.++.+|++. +. .++++|. +++++.|.++ |+...+.-. +.....++ .+||+|+++
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~- 169 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEG---RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILD- 169 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEEC-
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCe---EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEEC-
Confidence 578999999999999999887 33 5678888 8888888766 443211101 12233467 889999985
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMK 299 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~ 299 (332)
. .+...++.++.|+|||||.+++..+. +...++.+.++...
T Consensus 170 ----~---~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 ----L---PQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp ----S---SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred ----C---CCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 2 23457999999999999999998754 34555555555444
No 134
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.07 E-value=9e-11 Score=110.33 Aligned_cols=123 Identities=16% Similarity=0.192 Sum_probs=83.0
Q ss_pred ccccccchhhHHHHHHHHHhhcCCCCCCCCCeEEEecCcchH----HHHHHhcC-CCe--EEEEeecCc-hhhHHHHHhc
Q 020011 153 ASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGG----FAAAVIDD-PLW--VMNVVSSYA-ANTLAVVYDR 224 (332)
Q Consensus 153 ~~~F~~d~~~W~~~v~~y~~~l~~l~~~~~r~VLD~GCG~Gg----faa~L~~~-~v~--vmnv~p~d~-~~~l~~a~eR 224 (332)
...|-.|...|...... ++|. . ...+|||+|||+|. +|..|++. +.. ...|.++|. +++|+.|.+.
T Consensus 83 ~t~FfRd~~~f~~l~~~---llp~-~--~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~ 156 (274)
T 1af7_A 83 LTAFFREAHHFPILAEH---ARRR-H--GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSG 156 (274)
T ss_dssp CCCTTTTTTHHHHHHHH---HHHS-C--SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHT
T ss_pred CccccCChHHHHHHHHH---ccCC-C--CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhc
Confidence 33455566666543322 3443 1 24689999999997 66666653 210 126899999 9999999864
Q ss_pred C--------cc----------------c--------------ccccccccCCCCC--CccceeEehhhhccccccCCHHH
Q 020011 225 G--------LI----------------G--------------TYHDWCEAFSTYP--RTYDLLHLDGLFTAESHRCDMKF 264 (332)
Q Consensus 225 G--------li----------------g--------------~~~d~~e~~~~yp--~sFDlVh~s~vf~h~~~~c~~~~ 264 (332)
- +. | ..||+.+ .+|| +.||+|.|.+||.|+.+ .....
T Consensus 157 ~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~--~~~~~~~~fDlI~crnvliyf~~-~~~~~ 233 (274)
T 1af7_A 157 IYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLE--KQYNVPGPFDAIFCRNVMIYFDK-TTQED 233 (274)
T ss_dssp EEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTC--SSCCCCCCEEEEEECSSGGGSCH-HHHHH
T ss_pred CCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCC--CCCCcCCCeeEEEECCchHhCCH-HHHHH
Confidence 1 00 0 1133322 2455 78999999999999863 44578
Q ss_pred HHHHHHhhhcCCcEEEEEcC
Q 020011 265 VLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 265 iL~EmdRVLRPGG~lii~d~ 284 (332)
++.++.+.|||||+|++...
T Consensus 234 vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 234 ILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp HHHHHGGGEEEEEEEEECTT
T ss_pred HHHHHHHHhCCCcEEEEEec
Confidence 99999999999999999553
No 135
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.07 E-value=1.6e-10 Score=104.93 Aligned_cols=90 Identities=16% Similarity=0.146 Sum_probs=68.2
Q ss_pred CCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhcCccccc--ccccccCCCCC-CccceeEehhhhcc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDRGLIGTY--HDWCEAFSTYP-RTYDLLHLDGLFTA 255 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~d~~e~~~~yp-~sFDlVh~s~vf~h 255 (332)
..+|||+|||+|.++..|++. +. .++++|. +.+++.+.+++....+ .|. + -.+++ ++||+|++..+.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~-~~~~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASS-H-RLPFSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCT-T-SCSBCTTCEEEEEEESCC--
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcch-h-hCCCCCCceeEEEEeCCh--
Confidence 568999999999999999886 44 5788888 8899999887631111 111 1 13566 899999987442
Q ss_pred ccccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 256 ESHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 256 ~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
.++.|+.|+|||||.+++..+..
T Consensus 159 --------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 --------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp --------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred --------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 25899999999999999988653
No 136
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.06 E-value=9.4e-11 Score=111.74 Aligned_cols=98 Identities=12% Similarity=0.126 Sum_probs=70.5
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhcCccc-ccccccccCCCCCCccceeEehhhhcccccc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIG-TYHDWCEAFSTYPRTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eRGlig-~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~~ 259 (332)
...+|||+|||+|.++.+|+++.-. ..++.+|.+.+++.+.+..-+- ..+| .+.++|. ||+|+++++|+|+++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~d---~~~~~p~-~D~v~~~~~lh~~~d- 261 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPK-LKCIVFDRPQVVENLSGSNNLTYVGGD---MFTSIPN-ADAVLLKYILHNWTD- 261 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCBTTEEEEECC---TTTCCCC-CSEEEEESCGGGSCH-
T ss_pred cCceEEEeCCCccHHHHHHHHHCCC-CeEEEeeCHHHHhhcccCCCcEEEecc---ccCCCCC-ccEEEeehhhccCCH-
Confidence 3578999999999999999875211 1466777766776664421111 1122 2234555 999999999999975
Q ss_pred CCHHHHHHHHHhhhcC---CcEEEEEcC
Q 020011 260 CDMKFVLLEMDRILRP---NGYVIVRES 284 (332)
Q Consensus 260 c~~~~iL~EmdRVLRP---GG~lii~d~ 284 (332)
.....+|.++.|+||| ||+|+|.+.
T Consensus 262 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 262 KDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp HHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 2345899999999999 999999874
No 137
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.05 E-value=9.2e-11 Score=98.28 Aligned_cols=97 Identities=8% Similarity=0.107 Sum_probs=67.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc-cccc-ccccccCCCCC---CccceeEehh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL-IGTY-HDWCEAFSTYP---RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl-ig~~-~d~~e~~~~yp---~sFDlVh~s~ 251 (332)
..+|||+|||+|.++.+|++.+. +++++|. +.+++.+.++ ++ +-.+ .|..+....++ .+||+|+++.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 46899999999999999999876 3788888 8888887764 22 1111 11111111122 3899999998
Q ss_pred hhccccccCCHHHHHHHHH--hhhcCCcEEEEEcChh
Q 020011 252 LFTAESHRCDMKFVLLEMD--RILRPNGYVIVRESSY 286 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~Emd--RVLRPGG~lii~d~~~ 286 (332)
.++ . ....++.++. |+|||||.+++..+..
T Consensus 119 ~~~--~---~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 119 PYA--M---DLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CTT--S---CTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCc--h---hHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 775 2 2345666666 9999999999987654
No 138
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.05 E-value=8.8e-10 Score=97.93 Aligned_cols=132 Identities=14% Similarity=0.119 Sum_probs=84.5
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Cccc---c-cccccccCCCCC-----Ccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GLIG---T-YHDWCEAFSTYP-----RTY 244 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Glig---~-~~d~~e~~~~yp-----~sF 244 (332)
..+|||+|||+|.++.+|++. +. .|+.+|. +.+++.|.++ |+.. . ..|..+.+..++ ++|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGA---RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 578999999999999999884 33 5678888 8888887764 4321 1 122112122233 699
Q ss_pred ceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-----hHHHHHHHHHhcCcceeeeccc--ccccccceEE
Q 020011 245 DLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS-----YFIDAVATIAKGMKWSCHKEDT--EYGVEKEKLL 317 (332)
Q Consensus 245 DlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-----~~~~~i~~i~~~l~W~~~~~~~--e~~~~~e~~l 317 (332)
|+|+++...+++.+ ...++.++ |+|||||+|++.+.. ++++.++ ..-.++...... +.....+.+.
T Consensus 136 D~V~~d~~~~~~~~---~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~dG~~ 208 (221)
T 3u81_A 136 DMVFLDHWKDRYLP---DTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVR---GSSSFECTHYSSYLEYMKVVDGLE 208 (221)
T ss_dssp SEEEECSCGGGHHH---HHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHH---HCTTEEEEEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCcccchH---HHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHh---hCCCceEEEcccccccCCCCCceE
Confidence 99999987776542 34577777 999999999997743 3333333 333455544321 1112346788
Q ss_pred EEEecc
Q 020011 318 LCQKKL 323 (332)
Q Consensus 318 i~~K~~ 323 (332)
++++.=
T Consensus 209 ~~~~~g 214 (221)
T 3u81_A 209 KAIYQG 214 (221)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 887763
No 139
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.05 E-value=1.9e-10 Score=104.10 Aligned_cols=131 Identities=12% Similarity=0.118 Sum_probs=92.3
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCC-CCCCccceeEehhhhcc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFS-TYPRTYDLLHLDGLFTA 255 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~-~yp~sFDlVh~s~vf~h 255 (332)
..+|||+|||+|.+|..+....-.+ .+..+|. +.+++++.++ |+...+.- ++... +.+.+||+|.+..++||
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~-~d~~~~~~~~~~DvVLa~k~LHl 127 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF-LNKESDVYKGTYDVVFLLKMLPV 127 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEE-ECCHHHHTTSEEEEEEEETCHHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEE-ecccccCCCCCcChhhHhhHHHh
Confidence 6799999999999999997763333 6788999 8999988876 33211110 22222 23499999999999999
Q ss_pred ccccCCHHHHHHHHHhhhcCCcEEEEEcCh-----------hHHHHHHHHHhcCcceeeecccccccccceEEEEEe
Q 020011 256 ESHRCDMKFVLLEMDRILRPNGYVIVRESS-----------YFIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQK 321 (332)
Q Consensus 256 ~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-----------~~~~~i~~i~~~l~W~~~~~~~e~~~~~e~~li~~K 321 (332)
+.+ ....+..+.+.|||||.||-.+.. .+-...+..+..=-|.+...... .|-+-|.+|
T Consensus 128 L~~---~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~~----nEl~y~~~~ 197 (200)
T 3fzg_A 128 LKQ---QDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIG----NELVYITSG 197 (200)
T ss_dssp HHH---TTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEET----TEEEEEECC
T ss_pred hhh---hHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeeeC----ceEEEEEec
Confidence 953 345777999999999999998822 24556666667777777655333 355555544
No 140
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.05 E-value=5e-10 Score=102.20 Aligned_cols=131 Identities=19% Similarity=0.198 Sum_probs=82.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-cc-----cccccc-ccCCCCCCccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-IG-----TYHDWC-EAFSTYPRTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-ig-----~~~d~~-e~~~~yp~sFDlVh~s~vf 253 (332)
..+|||+|||+|.|+..|++++.. .|+++|. +++++.+..+.- .. .+...+ +.+.. ..||.+.+..+|
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v~ 113 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVSF 113 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCSS
T ss_pred CCEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEEh
Confidence 568999999999999999998742 5788888 888888776432 10 111111 11111 123444444444
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcCh----------------------hHHHHHHHHHhcCcceeeecccc--c
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESS----------------------YFIDAVATIAKGMKWSCHKEDTE--Y 309 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~----------------------~~~~~i~~i~~~l~W~~~~~~~e--~ 309 (332)
.++ ..+|.|+.|+|||||.|++...+ ...+++.++++..-|++...+.. .
T Consensus 114 ~~l------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~ 187 (232)
T 3opn_A 114 ISL------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIK 187 (232)
T ss_dssp SCG------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSC
T ss_pred hhH------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCC
Confidence 433 46999999999999999987211 13456667777767776443222 2
Q ss_pred cc--ccceEEEEEec
Q 020011 310 GV--EKEKLLLCQKK 322 (332)
Q Consensus 310 ~~--~~e~~li~~K~ 322 (332)
++ +.|-++.++|.
T Consensus 188 g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 188 GGAGNVEFLVHLLKD 202 (232)
T ss_dssp BTTTBCCEEEEEEES
T ss_pred CCCCCHHHHHHHhhc
Confidence 22 45667777763
No 141
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.05 E-value=2.3e-10 Score=109.67 Aligned_cols=96 Identities=16% Similarity=0.069 Sum_probs=65.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----Cccc---ccccccccCCCCC-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIG---TYHDWCEAFSTYP-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig---~~~d~~e~~~~yp-~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++..+++.+.. .|.++|...+++.|.++ |+.. .++.-.+. .++| ++||+|++..+.
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g~~--~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAGAK--KVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEE-VHLPVEKVDVIISEWMG 141 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCS--EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTT-SCCSCSCEEEEEECCCB
T ss_pred CCEEEEeeccCcHHHHHHHHcCCC--EEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHH-hcCCCCcEEEEEEcCch
Confidence 568999999999999999988641 45666662366666543 4311 11111111 2577 899999998743
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEE
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVI 280 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~li 280 (332)
.++.....+..+|.++.|+|||||.++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 333323456789999999999999998
No 142
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.05 E-value=1.6e-10 Score=102.01 Aligned_cols=99 Identities=11% Similarity=0.083 Sum_probs=70.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc----cccc-ccccccCCCCC-Cc-cceeEe
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL----IGTY-HDWCEAFSTYP-RT-YDLLHL 249 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl----ig~~-~d~~e~~~~yp-~s-FDlVh~ 249 (332)
..+|||+|||+|.++..++.++. -.|+++|. +.+++.|.++ |+ +-.+ .|..+....++ ++ ||+|.+
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 35899999999999998777664 25788888 8888888765 33 1111 11111122234 78 999999
Q ss_pred hhhhccccccCCHHHHHHHH--HhhhcCCcEEEEEcChh
Q 020011 250 DGLFTAESHRCDMKFVLLEM--DRILRPNGYVIVRESSY 286 (332)
Q Consensus 250 s~vf~h~~~~c~~~~iL~Em--dRVLRPGG~lii~d~~~ 286 (332)
+..|+ . .....++.++ .|+|||||.+++.....
T Consensus 132 ~~~~~-~---~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 132 DPPFH-F---NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCCSS-S---CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCCC-C---ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 87754 2 2466788898 78999999999988665
No 143
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.04 E-value=6.7e-10 Score=118.58 Aligned_cols=101 Identities=11% Similarity=0.071 Sum_probs=75.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----------Ccc--cccccccccCCCCC-Ccccee
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----------GLI--GTYHDWCEAFSTYP-RTYDLL 247 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----------Gli--g~~~d~~e~~~~yp-~sFDlV 247 (332)
..+|||+|||+|.++..|++.+.....|+++|. +.+++.|.+| |+. -.++.-.+. .+++ ++||+|
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d-Lp~~d~sFDlV 800 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE-FDSRLHDVDIG 800 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS-CCTTSCSCCEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh-CCcccCCeeEE
Confidence 578999999999999999998621126789999 8999988773 331 111110111 3456 999999
Q ss_pred EehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 248 HLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 248 h~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+|..+|+|+++ .....++.|+.|+|||| .+++..+.
T Consensus 801 V~~eVLeHL~d-p~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 801 TCLEVIEHMEE-DQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEESCGGGSCH-HHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEeCchhhCCh-HHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 99999999975 33456999999999999 88887754
No 144
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.03 E-value=6.6e-10 Score=99.67 Aligned_cols=107 Identities=18% Similarity=0.116 Sum_probs=75.5
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc-----Ccc--cc-cccccccCCCCC-CccceeE
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR-----GLI--GT-YHDWCEAFSTYP-RTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR-----Gli--g~-~~d~~e~~~~yp-~sFDlVh 248 (332)
..+|||+|||.|.++.+|++. +. .++.+|. +.+++.+.++ |.. -. ..|..+ .+++ ++||+|+
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~--~~~~~~~~D~v~ 171 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKG---LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE--AELEEAAYDGVA 171 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG--CCCCTTCEEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh--cCCCCCCcCEEE
Confidence 568999999999999999886 33 5677887 8888887766 421 11 122211 1367 8999999
Q ss_pred ehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChh-HHHHHHHHHhcCcce
Q 020011 249 LDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY-FIDAVATIAKGMKWS 301 (332)
Q Consensus 249 ~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~-~~~~i~~i~~~l~W~ 301 (332)
++ .+ +...++.++.|+|||||.+++..+.. .+.++.+.++...|.
T Consensus 172 ~~-----~~---~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 172 LD-----LM---EPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp EE-----SS---CGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred EC-----Cc---CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 84 22 34579999999999999999988765 455555555544443
No 145
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.02 E-value=4.6e-10 Score=97.24 Aligned_cols=137 Identities=12% Similarity=0.110 Sum_probs=75.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCC-eEEEEeecCchhhHHHHHhcCcccccccccccCC----------------------
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPL-WVMNVVSSYAANTLAVVYDRGLIGTYHDWCEAFS---------------------- 238 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v-~vmnv~p~d~~~~l~~a~eRGlig~~~d~~e~~~---------------------- 238 (332)
..+|||+|||+|+++.+|+++.- ....|+++|...+.. ..++.-...|..+ ..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~---~~~v~~~~~d~~~-~~~~~~~~~~~i~~~~~~~~~~~~ 98 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP---IPNVYFIQGEIGK-DNMNNIKNINYIDNMNNNSVDYKL 98 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC---CTTCEEEECCTTT-TSSCCC-----------CHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC---CCCceEEEccccc-hhhhhhccccccccccchhhHHHH
Confidence 46899999999999999987521 012456666622110 0111101111111 11
Q ss_pred --CCC-CccceeEehhhhcccc----ccC----CHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCcceeeecc
Q 020011 239 --TYP-RTYDLLHLDGLFTAES----HRC----DMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKWSCHKED 306 (332)
Q Consensus 239 --~yp-~sFDlVh~s~vf~h~~----~~c----~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W~~~~~~ 306 (332)
.++ ++||+|.|+..+++.. +.. ....++.++.|+|||||.|++.... +....+...++..--++....
T Consensus 99 ~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~f~~v~~~~ 178 (201)
T 2plw_A 99 KEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGMFQLVHTTK 178 (201)
T ss_dssp HHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTTEEEEEECC
T ss_pred HhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHHHheEEEEC
Confidence 146 7999999987765531 100 0124899999999999999986532 223344444444322333322
Q ss_pred cc-ccc-ccceEEEEEec
Q 020011 307 TE-YGV-EKEKLLLCQKK 322 (332)
Q Consensus 307 ~e-~~~-~~e~~li~~K~ 322 (332)
.. ..+ ..|..+|+++.
T Consensus 179 ~~~~r~~s~e~y~v~~~~ 196 (201)
T 2plw_A 179 PKASRNESREIYLVCKNF 196 (201)
T ss_dssp CC-----CCEEEEEEEEE
T ss_pred CcccCCcCceEEEEEecC
Confidence 22 122 56888998763
No 146
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.02 E-value=3.3e-10 Score=109.26 Aligned_cols=99 Identities=14% Similarity=0.106 Sum_probs=72.1
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhcCccc-ccccccccCCCCCCccceeEehhhhccccc
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIG-TYHDWCEAFSTYPRTYDLLHLDGLFTAESH 258 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eRGlig-~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~ 258 (332)
....+|||+|||+|.++..|+++.-. ..++.+|.+.+++.+.++.-+- ..+| .+.++|.. |+|+++++|||+++
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~D---~~~~~p~~-D~v~~~~vlh~~~d 274 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPT-IKGVNFDLPHVISEAPQFPGVTHVGGD---MFKEVPSG-DTILMKWILHDWSD 274 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEECHHHHTTCCCCTTEEEEECC---TTTCCCCC-SEEEEESCGGGSCH
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCC-CeEEEecCHHHHHhhhhcCCeEEEeCC---cCCCCCCC-CEEEehHHhccCCH
Confidence 34689999999999999999874211 1456677776776665432121 1122 23467744 99999999999974
Q ss_pred cCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 259 RCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 259 ~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
.+...+|.++.|+|||||+|+|.+.
T Consensus 275 -~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 275 -QHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp -HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred -HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 3567899999999999999999773
No 147
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.02 E-value=6.9e-10 Score=106.43 Aligned_cols=99 Identities=13% Similarity=0.048 Sum_probs=68.8
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----CcccccccccccCC--CCCCccceeEehhhhc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIGTYHDWCEAFS--TYPRTYDLLHLDGLFT 254 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig~~~d~~e~~~--~yp~sFDlVh~s~vf~ 254 (332)
...+|||+|||+|.++..+++.+.. .|+++|...++..+.++ |+...+.-.+..+. ++|.+||+|++..+++
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~--~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS--EEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBT
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCC--EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchh
Confidence 3568999999999999999887641 34555552355555443 44211111111222 3458899999999998
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEE
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~ 282 (332)
|+.. ..+...+.++.|+|||||.+++.
T Consensus 128 ~~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 MLFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TBTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred cCCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 8864 46778889999999999999864
No 148
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.02 E-value=3.4e-10 Score=99.27 Aligned_cols=93 Identities=17% Similarity=0.062 Sum_probs=67.9
Q ss_pred CCeEEEecCcchHHHHHHhcCC---CeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCC--CccceeEehh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDP---LWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYP--RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~---v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp--~sFDlVh~s~ 251 (332)
..+|||+|||+|.++..|++.. . .++++|. +++++.+.++ |+.......+....+++ .+||+|+++.
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDG---LVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTA 154 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECC
Confidence 5689999999999999998753 3 5677777 7888887765 32211000011122343 7899999999
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
+++|++ .++.|+|||||.+++..+..
T Consensus 155 ~~~~~~---------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 155 AGPKIP---------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp BBSSCC---------HHHHHTEEEEEEEEEEESSS
T ss_pred chHHHH---------HHHHHHcCCCcEEEEEECCC
Confidence 999875 38899999999999987654
No 149
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.01 E-value=5.9e-10 Score=100.95 Aligned_cols=113 Identities=12% Similarity=0.062 Sum_probs=71.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc------------Cccc--cc-ccccccCCC--CC-C
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR------------GLIG--TY-HDWCEAFST--YP-R 242 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR------------Glig--~~-~d~~e~~~~--yp-~ 242 (332)
..+|||+|||+|.|+..|++.+.- .+|+++|. +.+++.+.++ |+.. .+ .|. ..+++ |+ +
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~-~~~l~~~~~~~ 127 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPE-DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNA-MKFLPNFFEKG 127 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTT-SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCT-TSCGGGTSCTT
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCC-CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccH-HHHHHHhcccc
Confidence 467999999999999999886421 26788888 7788777654 4421 11 111 11223 66 8
Q ss_pred ccceeEehhhhccc-----cccCCHHHHHHHHHhhhcCCcEEEEE-cChhHHHHHHHHHh
Q 020011 243 TYDLLHLDGLFTAE-----SHRCDMKFVLLEMDRILRPNGYVIVR-ESSYFIDAVATIAK 296 (332)
Q Consensus 243 sFDlVh~s~vf~h~-----~~~c~~~~iL~EmdRVLRPGG~lii~-d~~~~~~~i~~i~~ 296 (332)
+||.|+...--.+. ..+-....++.++.|+|||||.|++. +..+..+.+.+.+.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~ 187 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLE 187 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHH
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHH
Confidence 99988754100000 00001147999999999999999985 55555555554433
No 150
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.01 E-value=1.2e-10 Score=99.17 Aligned_cols=99 Identities=15% Similarity=0.170 Sum_probs=69.3
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc---c-cccccccCCCCCCccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG---T-YHDWCEAFSTYPRTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig---~-~~d~~e~~~~yp~sFDlVh~s~v 252 (332)
..+|||+|||+|.++..|++++. ..|+++|. +.+++.+.++ |+.. . ..|..+.+...+++||+|+++..
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 46899999999999999998864 26788888 8888887764 3221 1 11221111223478999999876
Q ss_pred hccccccCCHHHHHHHHH--hhhcCCcEEEEEcChh
Q 020011 253 FTAESHRCDMKFVLLEMD--RILRPNGYVIVRESSY 286 (332)
Q Consensus 253 f~h~~~~c~~~~iL~Emd--RVLRPGG~lii~d~~~ 286 (332)
+++ .....++.++. |+|||||.+++.....
T Consensus 110 ~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 110 YAK----ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SHH----HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCc----chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 642 12456777776 9999999999987664
No 151
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.00 E-value=1.5e-09 Score=95.25 Aligned_cols=92 Identities=20% Similarity=0.061 Sum_probs=65.2
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Cccc---cc-ccccccCCCCCCccceeEe
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GLIG---TY-HDWCEAFSTYPRTYDLLHL 249 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~-~d~~e~~~~yp~sFDlVh~ 249 (332)
..+|||+|||+|.++.+|++. +. .|+.+|. +.+++.+.++ |+.. .+ .|..+.+...++ ||+|++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISS---RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFM 132 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEE
Confidence 468999999999999999876 33 5677787 7788777654 3321 11 111111122337 999998
Q ss_pred hhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 250 DGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 250 s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+.. ..+...++.++.|+|||||++++.+
T Consensus 133 ~~~------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 133 DCD------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp ETT------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred cCC------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 732 2456789999999999999999965
No 152
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.00 E-value=3.3e-09 Score=94.75 Aligned_cols=97 Identities=16% Similarity=0.107 Sum_probs=62.5
Q ss_pred CCCeEEEecCcchHHHHHHhcC--C-CeEEEEeecCc-hh----hHHHHHhcCccc-ccccccccC-CCCC-CccceeEe
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD--P-LWVMNVVSSYA-AN----TLAVVYDRGLIG-TYHDWCEAF-STYP-RTYDLLHL 249 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~--~-v~vmnv~p~d~-~~----~l~~a~eRGlig-~~~d~~e~~-~~yp-~sFDlVh~ 249 (332)
...+|||+|||+|.++.+|++. + . .|.++|. +. +++.+..+.-+- ...|..+.. .+++ .+||+|++
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~---~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDG---LVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTC---EEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCc---EEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 3568999999999999999876 2 3 4566676 44 445555432111 112221211 2334 89999999
Q ss_pred hhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 250 DGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 250 s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+.. .......++.++.|+|||||.+++.-..
T Consensus 154 ~~~-----~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 154 DVA-----QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp CCC-----CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred cCC-----CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 643 1122345688999999999999996544
No 153
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.00 E-value=9.8e-10 Score=102.89 Aligned_cols=148 Identities=12% Similarity=0.143 Sum_probs=95.0
Q ss_pred chhhHHHHHHHHHhhcCCCCCCCCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Cccccccc
Q 020011 159 DDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHD 232 (332)
Q Consensus 159 d~~~W~~~v~~y~~~l~~l~~~~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d 232 (332)
+++.....+..+...- ...+|||+|||+|.++.+|+.. +. +|+++|. +.+++.|.++ |+...++-
T Consensus 107 ~te~lv~~~l~~~~~~------~~~~vLDlG~GsG~~~~~la~~~~~---~v~~vDis~~al~~A~~n~~~~~l~~~v~~ 177 (284)
T 1nv8_A 107 ETEELVELALELIRKY------GIKTVADIGTGSGAIGVSVAKFSDA---IVFATDVSSKAVEIARKNAERHGVSDRFFV 177 (284)
T ss_dssp THHHHHHHHHHHHHHH------TCCEEEEESCTTSHHHHHHHHHSSC---EEEEEESCHHHHHHHHHHHHHTTCTTSEEE
T ss_pred hHHHHHHHHHHHhccc------CCCEEEEEeCchhHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCceEE
Confidence 4555555554433211 2358999999999999999887 33 6788888 8888888765 44211111
Q ss_pred cc-ccCCCCCCcc---ceeEeh------------hhhccccc-----cCCHHHHHHHHH-hhhcCCcEEEEEcChhHHHH
Q 020011 233 WC-EAFSTYPRTY---DLLHLD------------GLFTAESH-----RCDMKFVLLEMD-RILRPNGYVIVRESSYFIDA 290 (332)
Q Consensus 233 ~~-e~~~~yp~sF---DlVh~s------------~vf~h~~~-----~c~~~~iL~Emd-RVLRPGG~lii~d~~~~~~~ 290 (332)
.+ ..+.+++++| |+|.++ .+. |.+. .++-..++.++. +.|+|||++++.-..+.-+.
T Consensus 178 ~~~D~~~~~~~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~ 256 (284)
T 1nv8_A 178 RKGEFLEPFKEKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEE 256 (284)
T ss_dssp EESSTTGGGGGGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHH
T ss_pred EECcchhhcccccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHH
Confidence 11 1222334789 999997 233 3221 011226899999 99999999999887776677
Q ss_pred HHHHHhcCcceeeecccccccccceEEEEEec
Q 020011 291 VATIAKGMKWSCHKEDTEYGVEKEKLLLCQKK 322 (332)
Q Consensus 291 i~~i~~~l~W~~~~~~~e~~~~~e~~li~~K~ 322 (332)
+.++.+.. .... |-.+.+++++++++
T Consensus 257 v~~~~~~~---~~~~---D~~g~~R~~~~~~k 282 (284)
T 1nv8_A 257 LKKIVSDT---VFLK---DSAGKYRFLLLNRR 282 (284)
T ss_dssp HTTTSTTC---EEEE---CTTSSEEEEEEECC
T ss_pred HHHHHHhC---Ceec---ccCCCceEEEEEEc
Confidence 77776665 2222 23356788888765
No 154
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.00 E-value=2.6e-10 Score=103.16 Aligned_cols=105 Identities=14% Similarity=0.092 Sum_probs=71.8
Q ss_pred CCCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhc-------Ccccc---------------------
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDR-------GLIGT--------------------- 229 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eR-------Glig~--------------------- 229 (332)
...+|||+|||+|.++..|++. .. ..+|+++|. +.+++.|.++ |+...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 3568999999999999998875 21 247889999 8888887743 22000
Q ss_pred ----cc-------------cc-cccCCCC------C-CccceeEehhhhcccccc------CCHHHHHHHHHhhhcCCcE
Q 020011 230 ----YH-------------DW-CEAFSTY------P-RTYDLLHLDGLFTAESHR------CDMKFVLLEMDRILRPNGY 278 (332)
Q Consensus 230 ----~~-------------d~-~e~~~~y------p-~sFDlVh~s~vf~h~~~~------c~~~~iL~EmdRVLRPGG~ 278 (332)
+. -. +..+.++ + ++||+|+|+..+.+..+. .....++.++.|+|||||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 10 00 1122233 5 589999998776654321 2345799999999999999
Q ss_pred EEEEcChh
Q 020011 279 VIVRESSY 286 (332)
Q Consensus 279 lii~d~~~ 286 (332)
+++.+...
T Consensus 210 l~~~~~~~ 217 (250)
T 1o9g_A 210 IAVTDRSR 217 (250)
T ss_dssp EEEEESSS
T ss_pred EEEeCcch
Confidence 99966543
No 155
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.00 E-value=2.3e-11 Score=108.74 Aligned_cols=96 Identities=16% Similarity=0.225 Sum_probs=69.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCC-C-CccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTY-P-RTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~y-p-~sFDlVh~s~vf~ 254 (332)
..+|||+|||+|.++.+|++.+. .|+++|. +.+++.+.++ |+...+.-.+..+..+ + ++||+|+++..++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 56899999999999999999874 6788888 8888877665 3311111111111111 4 8999999999999
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
|..+. ...+.|+.|+|||||.+++..
T Consensus 156 ~~~~~---~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 156 GPDYA---TAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SGGGG---GSSSBCTTTSCSSCHHHHHHH
T ss_pred Ccchh---hhHHHHHHhhcCCcceeHHHH
Confidence 87543 237789999999999987764
No 156
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.00 E-value=2.5e-09 Score=95.72 Aligned_cols=95 Identities=12% Similarity=0.114 Sum_probs=64.3
Q ss_pred CCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhcCc----ccc-ccccccc--CCCCCCccceeEehh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDRGL----IGT-YHDWCEA--FSTYPRTYDLLHLDG 251 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eRGl----ig~-~~d~~e~--~~~yp~sFDlVh~s~ 251 (332)
...+|||+|||+|.++.+|++. +. -.|+++|. +.+++.+.++.- +-. ..|..+. +.+++.+||+|++
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~-- 149 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADK--GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE-- 149 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTT--SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEE--
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCC--cEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEE--
Confidence 4568999999999999999886 41 15678888 888877766521 111 1111111 0234478999983
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEE
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~ 282 (332)
++++......++.++.|+|||||.+++.
T Consensus 150 ---~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 ---DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ---CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 3333323367899999999999999994
No 157
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.99 E-value=5.2e-10 Score=109.10 Aligned_cols=114 Identities=12% Similarity=0.044 Sum_probs=75.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc---ccccccccCCCCC-CccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG---TYHDWCEAFSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~~d~~e~~~~yp-~sFDlVh~s~v 252 (332)
..+|||+|||+|.++..|++..- ...|+++|. +.+++.+.++ |+.. ........+.+++ ++||+|+|+-.
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPP 301 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECCC
T ss_pred CCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECCC
Confidence 47899999999999999988731 125678888 7788777654 3321 1001123344677 89999999988
Q ss_pred hcccc--ccCCHHHHHHHHHhhhcCCcEEEEEcCh--hHHHHHHHHHh
Q 020011 253 FTAES--HRCDMKFVLLEMDRILRPNGYVIVRESS--YFIDAVATIAK 296 (332)
Q Consensus 253 f~h~~--~~c~~~~iL~EmdRVLRPGG~lii~d~~--~~~~~i~~i~~ 296 (332)
|++.. .+.....++.++.|+|||||.+++..+. ..-..++++..
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 87632 1223346899999999999999997644 23344444433
No 158
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.99 E-value=3.9e-09 Score=93.58 Aligned_cols=96 Identities=15% Similarity=0.100 Sum_probs=61.0
Q ss_pred CCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhcC--c--cc-cccccccc--CCCCCCccceeEehh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDRG--L--IG-TYHDWCEA--FSTYPRTYDLLHLDG 251 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eRG--l--ig-~~~d~~e~--~~~yp~sFDlVh~s~ 251 (332)
...+|||+|||+|.++.+|++. +.- -.|.++|. +.+++.+.++. . +- ...|..+. +.+++.+||+|+++.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~-~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDV 151 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCC-eEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECC
Confidence 4568999999999999999875 210 14566777 66665554431 1 11 11222111 122347899999874
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEE
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~ 282 (332)
. .......++.++.|+|||||++++.
T Consensus 152 ~-----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 152 A-----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp C-----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 3 1122234599999999999999986
No 159
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.99 E-value=6.1e-10 Score=100.45 Aligned_cols=131 Identities=11% Similarity=0.034 Sum_probs=84.2
Q ss_pred CeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Ccc-ccc----ccccccCCCCC-CccceeE
Q 020011 183 RNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GLI-GTY----HDWCEAFSTYP-RTYDLLH 248 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Gli-g~~----~d~~e~~~~yp-~sFDlVh 248 (332)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+. ..+ .|..+.+..++ ++||+|+
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNT---TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTS---EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 48999999999999988873 33 5677888 7787777654 332 111 11112223454 8999999
Q ss_pred ehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh------------hHHHHHHHHHhcCcceeeecccccccccceE
Q 020011 249 LDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS------------YFIDAVATIAKGMKWSCHKEDTEYGVEKEKL 316 (332)
Q Consensus 249 ~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~------------~~~~~i~~i~~~l~W~~~~~~~e~~~~~e~~ 316 (332)
+.... .+...++.++.|+|||||++++.+.. .....++++.+.++..-...- ---|..+++
T Consensus 135 ~d~~~------~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~lp~gdGl 207 (221)
T 3dr5_A 135 GQVSP------MDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHV-ARLPLGAGL 207 (221)
T ss_dssp ECCCT------TTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEE-EEESSTTCE
T ss_pred EcCcH------HHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeE-EEeeccchH
Confidence 87533 34567999999999999999996532 122345555555555422110 011235679
Q ss_pred EEEEecc
Q 020011 317 LLCQKKL 323 (332)
Q Consensus 317 li~~K~~ 323 (332)
++++|.+
T Consensus 208 ~~~~~~~ 214 (221)
T 3dr5_A 208 TVVTKAL 214 (221)
T ss_dssp EEEEECC
T ss_pred HHHHHHH
Confidence 9999976
No 160
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.99 E-value=4e-09 Score=96.94 Aligned_cols=119 Identities=7% Similarity=0.010 Sum_probs=81.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC-------cccccccccccCC---------CCC-Cc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG-------LIGTYHDWCEAFS---------TYP-RT 243 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG-------lig~~~d~~e~~~---------~yp-~s 243 (332)
..+|||+|||+|.++..|+++.- ...|+++|. +.+++.|.++- +...+.-.+..+. .++ ++
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 56899999999999999988642 136788888 88888887652 1111111112221 255 89
Q ss_pred cceeEehhhhcc---------------ccccCCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCccee
Q 020011 244 YDLLHLDGLFTA---------------ESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSC 302 (332)
Q Consensus 244 FDlVh~s~vf~h---------------~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~ 302 (332)
||+|+|+--+.. ....+....++.++.|+|||||.|++.-+.+....+...++.- +..
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 999999732211 1123457889999999999999999988887777777776663 553
No 161
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.99 E-value=2.3e-09 Score=101.92 Aligned_cols=97 Identities=14% Similarity=0.096 Sum_probs=67.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----Cccc---ccccccccCCCCC-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIG---TYHDWCEAFSTYP-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig---~~~d~~e~~~~yp-~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++..+++.+.. .|.++|...++..|.++ |+.. .++.-.+. .++| ++||+|+|..+.
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~--~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAK--HVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLED-VHLPFPKVDIIISEWMG 115 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCS--EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTT-SCCSSSCEEEEEECCCB
T ss_pred CCEEEEecCccHHHHHHHHHCCCC--EEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhh-ccCCCCcccEEEEeCch
Confidence 468999999999999999988651 34555553355555443 4422 12111111 2467 899999998666
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEE
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIV 281 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii 281 (332)
+++.....+..++.++.|+|||||.++.
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 6555455678999999999999999983
No 162
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.98 E-value=1.1e-09 Score=97.65 Aligned_cols=95 Identities=15% Similarity=0.155 Sum_probs=68.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc---cc-ccccccCCCC--CCccceeEeh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG---TY-HDWCEAFSTY--PRTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~-~d~~e~~~~y--p~sFDlVh~s 250 (332)
..+|||+|||+|.++..|++..- ...|+.+|. +.+++.|.++ |+.. .. .|..+.+... +++||+|+++
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 46899999999999999987621 125778888 8888888766 4321 11 1211111112 4789999998
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
..++ +...++.++.|+|||||.+++.+
T Consensus 134 ~~~~------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 134 AAKG------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp GGGS------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCHH------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 6653 46789999999999999999975
No 163
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.97 E-value=4.2e-10 Score=99.10 Aligned_cols=96 Identities=20% Similarity=0.076 Sum_probs=62.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHH----Hh----cCccc--ccccccccCCCCC-CccceeE-
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVV----YD----RGLIG--TYHDWCEAFSTYP-RTYDLLH- 248 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a----~e----RGlig--~~~d~~e~~~~yp-~sFDlVh- 248 (332)
..+|||+|||+|.++.+|++..- ...|+++|. +.+++.+ .+ +++.. ..+.-.+. .+++ ++ |.|+
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~-l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER-LPPLSGV-GELHV 104 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT-CCSCCCE-EEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh-CCCCCCC-CEEEE
Confidence 56899999999999999998731 126788888 7777743 21 23321 11111112 3456 44 5555
Q ss_pred --ehhhhc--cccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 249 --LDGLFT--AESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 249 --~s~vf~--h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+...++ |+++ ...+|.|+.|+|||||.|++..
T Consensus 105 ~~~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 105 LMPWGSLLRGVLGS---SPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp ESCCHHHHHHHHTS---SSHHHHHHHHTEEEEEEEEEEE
T ss_pred Eccchhhhhhhhcc---HHHHHHHHHHHcCCCcEEEEEe
Confidence 333332 5543 2589999999999999999963
No 164
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.97 E-value=1.7e-10 Score=110.18 Aligned_cols=101 Identities=12% Similarity=0.101 Sum_probs=72.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCC-CccceeEehhhhcc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTA 255 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp-~sFDlVh~s~vf~h 255 (332)
..+|||+|||+|.++..|++.+.- ..|+++|. +.+++.+.++ ++...+. +..+..++ ++||+|+|+..|++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~--~~d~~~~~~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPK-IRLTLCDVSAPAVEASRATLAANGVEGEVF--ASNVFSEVKGRFDMIISNPPFHD 273 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTT-CBCEEEESBHHHHHHHHHHHHHTTCCCEEE--ECSTTTTCCSCEEEEEECCCCCS
T ss_pred CCeEEEecCccCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhCCCCEEE--EccccccccCCeeEEEECCCccc
Confidence 458999999999999999876421 14677787 7788777665 3322221 12233455 89999999999876
Q ss_pred cc--ccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 256 ES--HRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 256 ~~--~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
.. +......++.++.|+|||||.+++..+.
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 21 1123568999999999999999998654
No 165
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.97 E-value=7e-10 Score=108.53 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=73.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCC-CCC-CccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFS-TYP-RTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~-~yp-~sFDlVh~s~vf~ 254 (332)
..+|||+|||+|.++..|++.+. .|+++|. +.+++.+.++ |+...+. .+..+. .++ ++||+|+|+..|+
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~-~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQAL-HSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEE-ECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEE-EcchhhccccCCCeEEEEECCchh
Confidence 56899999999999999999875 6788888 8888877665 3221111 111111 244 7999999999998
Q ss_pred cccc--cCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 255 AESH--RCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 255 h~~~--~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
|... ......++.++.|+|||||.+++..+.
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 7321 124567999999999999999998754
No 166
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.96 E-value=4.5e-10 Score=101.58 Aligned_cols=96 Identities=11% Similarity=0.017 Sum_probs=58.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc--hhhHHHH---Hhc----CcccccccccccCCCCC----CccceeE
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA--ANTLAVV---YDR----GLIGTYHDWCEAFSTYP----RTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~--~~~l~~a---~eR----Glig~~~d~~e~~~~yp----~sFDlVh 248 (332)
..+|||+|||+|.++.+|+++.. ...|+++|. +.+++.| .++ |+..... .+.....+| +.||.|+
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~-~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVF-VIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEE-ECCBTTBCCGGGTTCEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEE-EEcCHHHhhhhccCeEEEEE
Confidence 56899999999999999985422 136788888 4555555 443 3322110 111222334 4445555
Q ss_pred ehhhh----ccccccCCHHHHHHHHHhhhcCCcEEEE
Q 020011 249 LDGLF----TAESHRCDMKFVLLEMDRILRPNGYVIV 281 (332)
Q Consensus 249 ~s~vf----~h~~~~c~~~~iL~EmdRVLRPGG~lii 281 (332)
++..+ .|. +.....+|.|+.|+|||||.|++
T Consensus 103 ~~~~~~~~~~~~--~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 103 ILFPWGTLLEYV--IKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EESCCHHHHHHH--HTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EeCCCcHHhhhh--hcchHHHHHHHHHhcCCCcEEEE
Confidence 43221 121 11235689999999999999999
No 167
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.96 E-value=1.5e-09 Score=102.44 Aligned_cols=139 Identities=19% Similarity=0.199 Sum_probs=82.9
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC------c----ccc-cccccccCC-CCC-Cccce
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG------L----IGT-YHDWCEAFS-TYP-RTYDL 246 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG------l----ig~-~~d~~e~~~-~yp-~sFDl 246 (332)
...+|||+|||.|+++..|++..- +..|+.+|. +.+++.+.++- + +-. ..|.. .+. ..+ ++||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~fDv 172 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGL-AFVRQTPDNTYDV 172 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH-HHHHSSCTTCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHH-HHHHhccCCceeE
Confidence 357899999999999999998731 125777888 88888887653 1 111 11111 111 124 89999
Q ss_pred eEehhhhccccccCCH--HHHHHHHHhhhcCCcEEEEEcCh-----hHHHHHHHHHhcCcceeeeccccccc----ccce
Q 020011 247 LHLDGLFTAESHRCDM--KFVLLEMDRILRPNGYVIVRESS-----YFIDAVATIAKGMKWSCHKEDTEYGV----EKEK 315 (332)
Q Consensus 247 Vh~s~vf~h~~~~c~~--~~iL~EmdRVLRPGG~lii~d~~-----~~~~~i~~i~~~l~W~~~~~~~e~~~----~~e~ 315 (332)
|+++....+.+. ..+ ..++.++.|+|||||.+++.... .....+.+.++...+..........+ +.-.
T Consensus 173 Ii~d~~~~~~~~-~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~ 251 (304)
T 3bwc_A 173 VIIDTTDPAGPA-SKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIG 251 (304)
T ss_dssp EEEECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCE
T ss_pred EEECCCCccccc-hhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceE
Confidence 999755543321 112 57999999999999999997543 23445555554443432221111111 2345
Q ss_pred EEEEEec
Q 020011 316 LLLCQKK 322 (332)
Q Consensus 316 ~li~~K~ 322 (332)
++++.|.
T Consensus 252 f~~as~~ 258 (304)
T 3bwc_A 252 TLVCSKK 258 (304)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 7888875
No 168
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.95 E-value=1e-09 Score=99.81 Aligned_cols=112 Identities=13% Similarity=0.059 Sum_probs=71.8
Q ss_pred CCeEEEecCcchHHHHHHhcC------CCeEEEEeecCc-hhhHHHHHhcC-ccccc-ccccccC--CCC-C-CccceeE
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD------PLWVMNVVSSYA-ANTLAVVYDRG-LIGTY-HDWCEAF--STY-P-RTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~------~v~vmnv~p~d~-~~~l~~a~eRG-lig~~-~d~~e~~--~~y-p-~sFDlVh 248 (332)
..+|||+|||+|.+++.|++. +. .|+++|. +.+++.|...+ -+-.+ .|.. .+ .++ + .+||+|+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~---~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~-~~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDC---QVIGIDRDLSRCQIPASDMENITLHQGDCS-DLTTFEHLREMAHPLIF 157 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCC---EEEEEESCCTTCCCCGGGCTTEEEEECCSS-CSGGGGGGSSSCSSEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCC---EEEEEeCChHHHHHHhccCCceEEEECcch-hHHHHHhhccCCCCEEE
Confidence 368999999999999998875 33 4667777 66666554211 01111 1211 11 123 3 3799999
Q ss_pred ehhhhccccccCCHHHHHHHHHh-hhcCCcEEEEEcChh-----HHHHHHHHHhcC--cceee
Q 020011 249 LDGLFTAESHRCDMKFVLLEMDR-ILRPNGYVIVRESSY-----FIDAVATIAKGM--KWSCH 303 (332)
Q Consensus 249 ~s~vf~h~~~~c~~~~iL~EmdR-VLRPGG~lii~d~~~-----~~~~i~~i~~~l--~W~~~ 303 (332)
+... |. +...+|.|+.| +|||||++++.+... .-..+.++.+.. .++..
T Consensus 158 ~d~~--~~----~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 158 IDNA--HA----NTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp EESS--CS----SHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred ECCc--hH----hHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 8754 42 56789999998 999999999986321 123566666655 45553
No 169
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.95 E-value=5.3e-10 Score=95.18 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=69.1
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccc---ccc-ccccccCC--CC-CCccceeEe
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLI---GTY-HDWCEAFS--TY-PRTYDLLHL 249 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gli---g~~-~d~~e~~~--~y-p~sFDlVh~ 249 (332)
..+|||+|||+|.++.++++++. ..|+++|. +.+++.+.++ |+. -.+ .|..+... ++ +.+||+|.+
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGM--DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEeCCccCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 46899999999999998888764 25678888 7788777654 321 111 22222111 12 389999999
Q ss_pred hhhhccccccCCHHHHHHHH--HhhhcCCcEEEEEcChh
Q 020011 250 DGLFTAESHRCDMKFVLLEM--DRILRPNGYVIVRESSY 286 (332)
Q Consensus 250 s~vf~h~~~~c~~~~iL~Em--dRVLRPGG~lii~d~~~ 286 (332)
+..+++ .....++.++ .|+|||||.+++..+..
T Consensus 123 ~~~~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 123 DPPYAK----QEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp CCCGGG----CCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCCc----hhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 977542 2456777777 99999999999987654
No 170
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.95 E-value=7e-09 Score=95.65 Aligned_cols=101 Identities=14% Similarity=0.023 Sum_probs=67.5
Q ss_pred CCCCCCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Ccc-ccccccccc-CCCCC-Ccccee
Q 020011 177 LGTDKIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLI-GTYHDWCEA-FSTYP-RTYDLL 247 (332)
Q Consensus 177 l~~~~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Gli-g~~~d~~e~-~~~yp-~sFDlV 247 (332)
+.-....+|||+|||+|.|+.+|++. |--. .|.++|. +++++.+.++ +.+ ....+-+.. ..++. .+||+|
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G-~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRG-RIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTC-EEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEE
Confidence 33344679999999999999999874 2111 3566777 7777766554 322 122222221 22345 899999
Q ss_pred EehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 248 HLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 248 h~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
++. +.|- .+...++.|+.|+|||||.++|..
T Consensus 152 f~d--~~~~---~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 152 YAD--VAQP---EQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEC--CCCT---THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEe--ccCC---hhHHHHHHHHHHhccCCCEEEEEE
Confidence 875 3332 245679999999999999999975
No 171
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.95 E-value=3.3e-10 Score=108.25 Aligned_cols=97 Identities=13% Similarity=0.129 Sum_probs=68.3
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc-CcccccccccccCCCCCCccceeEehhhhccccccC
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR-GLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHRC 260 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR-Glig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~~c 260 (332)
..+|||+|||+|.++.+|+++.-. ..++.+|.+.+++.+.+. ++.-..+| .+.++| +||+|+++++|+|+++ .
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~d---~~~~~~-~~D~v~~~~vlh~~~d-~ 267 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPH-LKCTVFDQPQVVGNLTGNENLNFVGGD---MFKSIP-SADAVLLKWVLHDWND-E 267 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTT-SEEEEEECHHHHSSCCCCSSEEEEECC---TTTCCC-CCSEEEEESCGGGSCH-H
T ss_pred CCEEEEECCCcCHHHHHHHHHCCC-CeEEEeccHHHHhhcccCCCcEEEeCc---cCCCCC-CceEEEEcccccCCCH-H
Confidence 578999999999999999876311 134556666666555431 11111122 233455 5999999999999975 2
Q ss_pred CHHHHHHHHHhhhcC---CcEEEEEcC
Q 020011 261 DMKFVLLEMDRILRP---NGYVIVRES 284 (332)
Q Consensus 261 ~~~~iL~EmdRVLRP---GG~lii~d~ 284 (332)
....+|.++.|+||| ||.|+|.+.
T Consensus 268 ~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 268 QSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp HHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 345899999999999 999999763
No 172
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.95 E-value=2.4e-09 Score=94.49 Aligned_cols=133 Identities=13% Similarity=0.047 Sum_probs=73.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccC------CCCC----CccceeEeh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAF------STYP----RTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~------~~yp----~sFDlVh~s 250 (332)
..+|||+|||+|+++.+|++++. .|+++|. +.. . ..++.-...|..+.. ..++ ++||+|.|+
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~---~V~gvD~~~~~-~---~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd 98 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLAR---KIISIDLQEME-E---IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSD 98 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCS---EEEEEESSCCC-C---CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEEC
T ss_pred CCEEEEEeecCCHHHHHHHHcCC---cEEEEeccccc-c---CCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecC
Confidence 57899999999999999999854 3455555 211 0 012211112211100 0011 489999996
Q ss_pred hhh--------ccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCcce-eeecccc-ccc-ccceEEE
Q 020011 251 GLF--------TAESHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKWS-CHKEDTE-YGV-EKEKLLL 318 (332)
Q Consensus 251 ~vf--------~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W~-~~~~~~e-~~~-~~e~~li 318 (332)
... .|.........++.++.|+|||||.|++.... .....+....+.. +. +...... +-+ ..|-.+|
T Consensus 99 ~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~-F~~v~~~kP~asR~~s~E~y~v 177 (191)
T 3dou_A 99 AMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN-FSSYKISKPPASRGSSSEIYIM 177 (191)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG-EEEEEEECC------CCEEEEE
T ss_pred CCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh-cCEEEEECCCCccCCCceEEEE
Confidence 422 12111112356899999999999999986532 2223444444432 33 2222222 112 5788898
Q ss_pred EEec
Q 020011 319 CQKK 322 (332)
Q Consensus 319 ~~K~ 322 (332)
|++-
T Consensus 178 ~~~~ 181 (191)
T 3dou_A 178 FFGF 181 (191)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 8764
No 173
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.94 E-value=2.4e-09 Score=96.18 Aligned_cols=131 Identities=13% Similarity=0.108 Sum_probs=82.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc---cc-ccccccCC-------------C
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG---TY-HDWCEAFS-------------T 239 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~-~d~~e~~~-------------~ 239 (332)
..+|||+|||+|.++..|++..--...|+.+|. +.+++.+.++ |+.. .. .|..+.+. .
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 468999999999999999875100125677777 7788777665 4321 11 11111111 1
Q ss_pred C--C-CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh------------hHHHHHH----HHHhcCcc
Q 020011 240 Y--P-RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS------------YFIDAVA----TIAKGMKW 300 (332)
Q Consensus 240 y--p-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~------------~~~~~i~----~i~~~l~W 300 (332)
| + ++||+|+++.... ....++.++.|+|||||.+++.+.. .....++ .+...-.+
T Consensus 141 f~~~~~~fD~I~~~~~~~------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADKE------NYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLV 214 (239)
T ss_dssp TCCSTTCEEEEEECSCGG------GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTE
T ss_pred ccCCCCCcCEEEEeCCHH------HHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCCCe
Confidence 2 2 6899999985443 3457999999999999999997621 1122233 33344455
Q ss_pred eeeecccccccccceEEEEEecc
Q 020011 301 SCHKEDTEYGVEKEKLLLCQKKL 323 (332)
Q Consensus 301 ~~~~~~~e~~~~~e~~li~~K~~ 323 (332)
.+..... .+++.+++|.+
T Consensus 215 ~~~~~p~-----~~g~~~~~~~~ 232 (239)
T 2hnk_A 215 DVSLVPI-----ADGVSLVRKRL 232 (239)
T ss_dssp EEEEECS-----TTCEEEEEECC
T ss_pred EEEEEEc-----CCceEeeeehh
Confidence 5554422 35688898876
No 174
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.93 E-value=3.9e-09 Score=94.08 Aligned_cols=106 Identities=11% Similarity=0.003 Sum_probs=74.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccccccccccc-cCCCC-C-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCE-AFSTY-P-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e-~~~~y-p-~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++..|++.+. .++.+|. +++++.+.++ |+......... ....+ + ++||+|+++
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~--- 165 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEVAG---EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD--- 165 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC---
T ss_pred CCEEEEeCCCccHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC---
Confidence 56899999999999999988743 6788888 8888888765 33111111111 12234 5 789999985
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcC
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGM 298 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l 298 (332)
. .+...++.++.|+|||||.+++..+. +.+.++...++..
T Consensus 166 --~---~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 166 --V---REPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY 206 (248)
T ss_dssp --S---SCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT
T ss_pred --C---cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 2 24457899999999999999999885 3455555554443
No 175
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.92 E-value=1.1e-09 Score=96.55 Aligned_cols=99 Identities=7% Similarity=0.001 Sum_probs=70.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc--ccccccccccCCCCC-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL--IGTYHDWCEAFSTYP-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl--ig~~~d~~e~~~~yp-~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++..++.++.. .|+++|. +.+++.+.++ |+ +-.++.-+..+.+++ ++||+|.++..|
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~--~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAA--GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 368999999999999987777642 5788898 8888888765 33 111111111223445 899999998665
Q ss_pred ccccccCCHHHHHHHHHh--hhcCCcEEEEEcChh
Q 020011 254 TAESHRCDMKFVLLEMDR--ILRPNGYVIVRESSY 286 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdR--VLRPGG~lii~d~~~ 286 (332)
+ . .....++.++.+ +|||||.+++.....
T Consensus 133 ~-~---~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 133 R-R---GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp S-T---TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred C-C---CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 4 1 346678888865 699999999988664
No 176
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.91 E-value=9.3e-10 Score=103.81 Aligned_cols=95 Identities=17% Similarity=-0.057 Sum_probs=67.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--cc-ccccccCCCCCCccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TY-HDWCEAFSTYPRTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~-~d~~e~~~~yp~sFDlVh~s~vf 253 (332)
..+|||+|||.|.++..|++.+.....|+++|. +++++.+.++ |+.. .. .|. ....+..++||+|++..++
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~-~~~~~~~~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDG-YYGVPEFSPYDVIFVTVGV 154 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSBB
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECCh-hhccccCCCeEEEEEcCCH
Confidence 568999999999999999876321114677777 7888887766 4422 11 111 1111112889999999999
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
+|+. .++.|+|||||.+++.....
T Consensus 155 ~~~~---------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 155 DEVP---------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp SCCC---------HHHHHHEEEEEEEEEEBCBG
T ss_pred HHHH---------HHHHHhcCCCcEEEEEECCC
Confidence 9875 47889999999999986543
No 177
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.91 E-value=1.4e-09 Score=104.47 Aligned_cols=107 Identities=14% Similarity=0.044 Sum_probs=75.5
Q ss_pred CCCCCCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhcCc---ccccccccccCCCCC-CccceeEehh
Q 020011 176 ALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGL---IGTYHDWCEAFSTYP-RTYDLLHLDG 251 (332)
Q Consensus 176 ~l~~~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eRGl---ig~~~d~~e~~~~yp-~sFDlVh~s~ 251 (332)
.+.....++|||+|||+|.++.+|+++.-. +.++-.|.+.+++.+.++-- ..-+.-....|..-| ..+|++.+.+
T Consensus 174 ~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~-~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~ 252 (353)
T 4a6d_A 174 AFDLSVFPLMCDLGGGAGALAKECMSLYPG-CKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILAR 252 (353)
T ss_dssp SSCGGGCSEEEEETCTTSHHHHHHHHHCSS-CEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEES
T ss_pred hcCcccCCeEEeeCCCCCHHHHHHHHhCCC-ceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEeee
Confidence 344456789999999999999999886321 13455666888888776521 110100011122224 6789999999
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+||++++ .+...+|.++.|.|+|||.|+|.|.
T Consensus 253 vlh~~~d-~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 253 VLHDWAD-GKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp SGGGSCH-HHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ecccCCH-HHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 9999985 3457899999999999999999874
No 178
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.91 E-value=4.1e-09 Score=90.68 Aligned_cols=100 Identities=17% Similarity=0.159 Sum_probs=58.7
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCe-------EEEEeecCchhhHHHHHhcCcccc-ccccccc------CCCCC-Cccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLW-------VMNVVSSYAANTLAVVYDRGLIGT-YHDWCEA------FSTYP-RTYD 245 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~-------vmnv~p~d~~~~l~~a~eRGlig~-~~d~~e~------~~~yp-~sFD 245 (332)
..+|||+|||+|.++.+|+++ +.- ...|+++|...+... + ++.-. ..|..+. ...++ ++||
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~--~-~~~~~~~~d~~~~~~~~~~~~~~~~~~fD 99 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPL--E-GATFLCPADVTDPRTSQRILEVLPGRRAD 99 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCC--T-TCEEECSCCTTSHHHHHHHHHHSGGGCEE
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccC--C-CCeEEEeccCCCHHHHHHHHHhcCCCCCc
Confidence 468999999999999999876 310 014566666221100 0 11000 1111110 01245 6999
Q ss_pred eeEehhhhcc----cccc----CCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 246 LLHLDGLFTA----ESHR----CDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 246 lVh~s~vf~h----~~~~----c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+|.|+..++. ..+. .....++.++.|+|||||.|++...
T Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 100 VILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 9999654432 1111 0114789999999999999999864
No 179
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.90 E-value=3.5e-09 Score=96.58 Aligned_cols=91 Identities=20% Similarity=0.180 Sum_probs=66.7
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc-----C-ccc---c-cccccccCCCCC-Cccce
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR-----G-LIG---T-YHDWCEAFSTYP-RTYDL 246 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR-----G-lig---~-~~d~~e~~~~yp-~sFDl 246 (332)
..+|||+|||+|.++.+|++. +. .+.++|. +++++.+.++ | +.. . ..|..+ .+++ ++||+
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~--~~~~~~~~D~ 174 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAG---QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD--SELPDGSVDR 174 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG--CCCCTTCEEE
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh--cCCCCCceeE
Confidence 568999999999999999874 33 5678888 8888877765 3 111 1 122211 2466 89999
Q ss_pred eEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 247 LHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 247 Vh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
|+++ .+ +...++.++.|+|||||.+++..+.
T Consensus 175 v~~~-----~~---~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 175 AVLD-----ML---APWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp EEEE-----SS---CGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred EEEC-----Cc---CHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 9984 22 3457999999999999999998865
No 180
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.89 E-value=4.5e-09 Score=96.59 Aligned_cols=111 Identities=13% Similarity=0.043 Sum_probs=75.4
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Cccccccccc-ccCCCCC-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWC-EAFSTYP-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~-e~~~~yp-~sFDlVh~s~vf 253 (332)
..+|||+|||+|.++..|++. +-- ..++.+|. +++++.|.++ |+...+.-.+ .....++ ++||+|+++
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~--- 188 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSS-GKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLD--- 188 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTT-CEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEEC---
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEEC---
Confidence 568999999999999999876 311 25778888 8888887765 4311111111 1122366 889999985
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCcce
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKWS 301 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W~ 301 (332)
. .+...++.++.|+|||||.+++..+. ..+.++.+.++...|.
T Consensus 189 --~---~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 189 --V---PDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFI 232 (277)
T ss_dssp --C---SCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred --C---cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 2 23457999999999999999998875 3455555555544443
No 181
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.89 E-value=9.3e-10 Score=98.63 Aligned_cols=94 Identities=16% Similarity=0.152 Sum_probs=67.1
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCC-C-ccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYP-R-TYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp-~-sFDlVh~s~vf~ 254 (332)
..+|||+|||+|.++..|++... ..|+.+|. +.+++.+.++ |+....-..+....+++ . .||+|+++.+++
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~ 169 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAGAP 169 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBS
T ss_pred CCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECCcHH
Confidence 56899999999999999988641 24677776 7788777765 33221100112234566 4 499999999988
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
|+. .++.|+|||||.+++..+..
T Consensus 170 ~~~---------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 170 KIP---------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp SCC---------HHHHHTEEEEEEEEEEECSS
T ss_pred HHH---------HHHHHhcCCCcEEEEEEecC
Confidence 765 37899999999999988654
No 182
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.89 E-value=5.1e-09 Score=92.56 Aligned_cols=93 Identities=18% Similarity=0.126 Sum_probs=64.7
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Cccc---cc-ccccccCCCCC-----Ccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GLIG---TY-HDWCEAFSTYP-----RTY 244 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~-~d~~e~~~~yp-----~sF 244 (332)
..+|||+|||+|.++.+|++. +. .|+.+|. +.+++.+.++ |+.. .+ .|..+.+..++ ++|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADG---RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 468999999999999999885 33 5677777 7777777654 4311 11 11111111121 689
Q ss_pred ceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 245 DLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 245 DlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
|+|+++.. ......++.++.|+|||||.+++.+
T Consensus 147 D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 147 DVAVVDAD------KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEEECSC------STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 99999743 3456789999999999999999965
No 183
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.88 E-value=5.7e-10 Score=104.07 Aligned_cols=97 Identities=16% Similarity=0.142 Sum_probs=57.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhcCcc----c-ccccc--cccCCCCC-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLI----G-TYHDW--CEAFSTYP-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eRGli----g-~~~d~--~e~~~~yp-~sFDlVh~s~vf 253 (332)
..+|||+|||+|+++.+|++++ .|+++|...++..+.++... + .+.-. +..+..+| ++||+|.|+.+
T Consensus 75 g~~VLDlGcGtG~~s~~la~~~----~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~~- 149 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASRP----HVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDVG- 149 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTST----TEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-
T ss_pred CCEEEEeCcCCCHHHHHHHHcC----cEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeCc-
Confidence 5689999999999999998873 23344441121111111111 0 00101 12233456 89999999866
Q ss_pred ccccccC-C---HHHHHHHHHhhhcCCc--EEEEEc
Q 020011 254 TAESHRC-D---MKFVLLEMDRILRPNG--YVIVRE 283 (332)
Q Consensus 254 ~h~~~~c-~---~~~iL~EmdRVLRPGG--~lii~d 283 (332)
++..+.. + ...+|.++.|+||||| .|++..
T Consensus 150 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 150 ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 3322110 0 1138899999999999 999865
No 184
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.88 E-value=1.5e-09 Score=100.95 Aligned_cols=96 Identities=11% Similarity=0.093 Sum_probs=67.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc--hhhHHHHHhcC---------c-------c-cccccccccCCCC--
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA--ANTLAVVYDRG---------L-------I-GTYHDWCEAFSTY-- 240 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~--~~~l~~a~eRG---------l-------i-g~~~d~~e~~~~y-- 240 (332)
..+|||+|||+|.++..|+..+.. .|+++|. +.+++.+.++. + + ....+|.+....+
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~~--~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGAD--QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCS--EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCCC--EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 468999999999999999887641 3556665 56666665432 1 1 1113354432212
Q ss_pred --C-CccceeEehhhhccccccCCHHHHHHHHHhhhc---C--CcEEEEE
Q 020011 241 --P-RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILR---P--NGYVIVR 282 (332)
Q Consensus 241 --p-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLR---P--GG~lii~ 282 (332)
+ ++||+|.+++++.|.+ +...++.++.|+|| | ||.+++.
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~---~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQ---AHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGG---GHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hccCCCCCEEEEeCcccChH---HHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 4 8999999999998854 47889999999999 9 9976553
No 185
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.87 E-value=4.3e-10 Score=106.85 Aligned_cols=102 Identities=14% Similarity=-0.028 Sum_probs=58.5
Q ss_pred CCeEEEecCcchHHHHHHhcCC-CeEEEEeecCchhhHHHHH-h-cCcccccccccc-cCCCCC-CccceeEehhhhc--
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDP-LWVMNVVSSYAANTLAVVY-D-RGLIGTYHDWCE-AFSTYP-RTYDLLHLDGLFT-- 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~-v~vmnv~p~d~~~~l~~a~-e-RGlig~~~d~~e-~~~~yp-~sFDlVh~s~vf~-- 254 (332)
..+|||+|||+|+++.+|++++ |..+++..+..+.++..+. + .|..+. .-.+. .+..+| .+||+|+|+..++
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~D~~~l~~~~fD~V~sd~~~~~g 161 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLV-RLQSGVDVFFIPPERCDTLLCDIGESSP 161 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGE-EEECSCCTTTSCCCCCSEEEECCCCCCS
T ss_pred CCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCe-EEEeccccccCCcCCCCEEEECCccccC
Confidence 4689999999999999999884 2233331111121211110 1 111111 10112 233455 8999999986653
Q ss_pred -cccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 255 -AESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 255 -h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+..+......+|.++.|+|||||.|++...
T Consensus 162 ~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 162 NPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred cchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 111111111589999999999999999653
No 186
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.87 E-value=3.6e-09 Score=105.56 Aligned_cols=98 Identities=9% Similarity=0.017 Sum_probs=67.1
Q ss_pred CCeEEEecCcchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhc-----------Ccc-cccccccccCC--CCC---C
Q 020011 182 IRNVMDMNTLYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDR-----------GLI-GTYHDWCEAFS--TYP---R 242 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eR-----------Gli-g~~~d~~e~~~--~yp---~ 242 (332)
..+|||+|||+|.++..++. .+.. .++++|. ++++.+|.+. |+. +.+.-.+..+. +|+ .
T Consensus 174 gd~VLDLGCGtG~l~l~lA~~~g~~--kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~ 251 (438)
T 3uwp_A 174 DDLFVDLGSGVGQVVLQVAAATNCK--HHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIA 251 (438)
T ss_dssp TCEEEEESCTTSHHHHHHHHHCCCS--EEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccC
Confidence 56899999999999988875 3442 3678888 7777777542 331 11111112222 233 4
Q ss_pred ccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 243 TYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 243 sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+||+|+++.++ +. .+....|.|+.|+|||||.||+.+..
T Consensus 252 ~aDVVf~Nn~~-F~---pdl~~aL~Ei~RvLKPGGrIVssE~f 290 (438)
T 3uwp_A 252 NTSVIFVNNFA-FG---PEVDHQLKERFANMKEGGRIVSSKPF 290 (438)
T ss_dssp TCSEEEECCTT-CC---HHHHHHHHHHHTTSCTTCEEEESSCS
T ss_pred CccEEEEcccc-cC---chHHHHHHHHHHcCCCCcEEEEeecc
Confidence 79999998765 22 25678899999999999999998743
No 187
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.86 E-value=1.9e-09 Score=108.55 Aligned_cols=98 Identities=13% Similarity=0.049 Sum_probs=68.7
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----CcccccccccccCC--CCCCccceeEehhhhc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----GLIGTYHDWCEAFS--TYPRTYDLLHLDGLFT 254 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----Glig~~~d~~e~~~--~yp~sFDlVh~s~vf~ 254 (332)
...+|||+|||+|.++..|++.+. ..|+++|...+++.|.++ |+...+.-....+. ++|..||+|+|+.+++
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~--~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGA--RKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 235 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTC--SEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHH
T ss_pred CCCEEEEecCcccHHHHHHHHcCC--CEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCchH
Confidence 357899999999999999988764 256777773366666543 44221111111111 3568899999988888
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEE
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIV 281 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii 281 (332)
|+.+ ..+..++.++.|+|||||.+++
T Consensus 236 ~~~~-e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 236 MLFN-ERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHTC-HHHHHHHHHGGGGEEEEEEEES
T ss_pred hcCc-HHHHHHHHHHHHhcCCCCEEEE
Confidence 7753 3456788899999999999985
No 188
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.85 E-value=5.6e-09 Score=93.98 Aligned_cols=96 Identities=14% Similarity=0.113 Sum_probs=65.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc---cc-ccccccCCC--C-C--Ccccee
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG---TY-HDWCEAFST--Y-P--RTYDLL 247 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~-~d~~e~~~~--y-p--~sFDlV 247 (332)
.++|||+|||+|.++.+|++.---...|+.+|. +.+++.|.++ |+.. .. .|..+.+.. + + ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 468999999999999999875100115677777 7788777654 4321 11 111111111 2 1 789999
Q ss_pred EehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 248 HLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 248 h~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
++.... .+...++.++.|+|||||++++.+
T Consensus 153 ~~d~~~------~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 153 FIDADK------RNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EECSCG------GGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred EECCCH------HHHHHHHHHHHHHcCCCeEEEEeC
Confidence 987542 245689999999999999999965
No 189
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.85 E-value=5.7e-09 Score=90.74 Aligned_cols=108 Identities=11% Similarity=-0.030 Sum_probs=71.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-ccccccccccCCCCCCccceeEehhhhcccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-IGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-ig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~~ 259 (332)
..+|||+|||+|.++.+|+..+. ..|+++|. +.+++.+.++-- +-.+ +..+..+|++||+|.++..|+|..+.
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~---~~d~~~~~~~~D~v~~~~p~~~~~~~ 126 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGA--ESVTAFDIDPDAIETAKRNCGGVNFM---VADVSEISGKYDTWIMNPPFGSVVKH 126 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTB--SEEEEEESCHHHHHHHHHHCTTSEEE---ECCGGGCCCCEEEEEECCCC------
T ss_pred CCEEEEEeCCccHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhcCCCEEE---ECcHHHCCCCeeEEEECCCchhccCc
Confidence 56899999999999999998854 24788888 889998887632 1111 11222356899999999999987642
Q ss_pred CCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcC
Q 020011 260 CDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGM 298 (332)
Q Consensus 260 c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l 298 (332)
....++.++.|+| |+.+++. +......+.+++...
T Consensus 127 -~~~~~l~~~~~~~--g~~~~~~-~~~~~~~~~~~~~~~ 161 (200)
T 1ne2_A 127 -SDRAFIDKAFETS--MWIYSIG-NAKARDFLRREFSAR 161 (200)
T ss_dssp --CHHHHHHHHHHE--EEEEEEE-EGGGHHHHHHHHHHH
T ss_pred -hhHHHHHHHHHhc--CcEEEEE-cCchHHHHHHHHHHC
Confidence 2346899999999 6655554 444455666655444
No 190
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.84 E-value=1.2e-08 Score=92.97 Aligned_cols=127 Identities=9% Similarity=0.050 Sum_probs=76.4
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHH----HHHhcCccc---cc-ccccccCCCC-----CCcc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLA----VVYDRGLIG---TY-HDWCEAFSTY-----PRTY 244 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~----~a~eRGlig---~~-~d~~e~~~~y-----p~sF 244 (332)
.++|||+|||+|.++.+|++. +. .|+.+|. +.+++ .+...|+.. .+ .|..+.+..+ +++|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDG---QVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTC---EEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 468999999999999999873 33 3445554 44443 333335421 11 1111111122 4789
Q ss_pred ceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh------------hHHHHHHHHH----hcCcceeeecccc
Q 020011 245 DLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS------------YFIDAVATIA----KGMKWSCHKEDTE 308 (332)
Q Consensus 245 DlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~------------~~~~~i~~i~----~~l~W~~~~~~~e 308 (332)
|+|+++... .+...++.++.|+|||||++++.+.. .....++++. ..=++++.+.
T Consensus 138 D~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--- 208 (242)
T 3r3h_A 138 DFIFIDADK------TNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLL--- 208 (242)
T ss_dssp EEEEEESCG------GGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEE---
T ss_pred eEEEEcCCh------HHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEE---
Confidence 999998542 24567999999999999999996632 1122333333 3334554443
Q ss_pred cccccceEEEEEec
Q 020011 309 YGVEKEKLLLCQKK 322 (332)
Q Consensus 309 ~~~~~e~~li~~K~ 322 (332)
+..+++++++|.
T Consensus 209 --p~~dG~~~~~k~ 220 (242)
T 3r3h_A 209 --AIADGMFLVQPI 220 (242)
T ss_dssp --SSSSCEEEEEEC
T ss_pred --EccCceEEEEEc
Confidence 224678888875
No 191
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.84 E-value=5.7e-10 Score=104.70 Aligned_cols=96 Identities=17% Similarity=0.085 Sum_probs=57.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhcCcc------c--ccccccccCCCCC-CccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLI------G--TYHDWCEAFSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eRGli------g--~~~d~~e~~~~yp-~sFDlVh~s~v 252 (332)
..+|||+|||+|+|+.+|++++ .|+++|...++..+.++.+. + .+.+ ...+..+| ++||+|.|+.+
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~----~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~-~~D~~~l~~~~fD~Vvsd~~ 157 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQP----NVREVKAYTLGTSGHEKPRLVETFGWNLITFKS-KVDVTKMEPFQADTVLCDIG 157 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTST----TEEEEEEECCCCTTSCCCCCCCCTTGGGEEEEC-SCCGGGCCCCCCSEEEECCC
T ss_pred CCEEEEeccCCCHHHHHHHHcC----CEEEEECchhhhhhhhchhhhhhcCCCeEEEec-cCcHhhCCCCCcCEEEECCC
Confidence 5689999999999999999873 23444441122222222211 1 1100 11223356 89999999866
Q ss_pred hccccccC-C---HHHHHHHHHhhhcCCc--EEEEEc
Q 020011 253 FTAESHRC-D---MKFVLLEMDRILRPNG--YVIVRE 283 (332)
Q Consensus 253 f~h~~~~c-~---~~~iL~EmdRVLRPGG--~lii~d 283 (332)
++..+.. + ...+|.++.|+||||| .|++..
T Consensus 158 -~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 158 -ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp -CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred -cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 3322100 0 1137899999999999 998865
No 192
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.83 E-value=7.1e-09 Score=96.68 Aligned_cols=99 Identities=13% Similarity=0.038 Sum_probs=66.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC-----c-------c-cccccccccCCCC---CCcc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG-----L-------I-GTYHDWCEAFSTY---PRTY 244 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG-----l-------i-g~~~d~~e~~~~y---p~sF 244 (332)
..+|||+|||.|+++..|++.+. ..|+.+|. +.+++.|.++- + . ..+.-.+.....| +++|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 57899999999999999998853 35777888 88888887652 1 0 0011111111111 6789
Q ss_pred ceeEehhhhccccccCC--HHHHHHHHHhhhcCCcEEEEEc
Q 020011 245 DLLHLDGLFTAESHRCD--MKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 245 DlVh~s~vf~h~~~~c~--~~~iL~EmdRVLRPGG~lii~d 283 (332)
|+|+++... +...... ...++.++.|+|||||.+++..
T Consensus 154 D~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 999987432 2211111 2578999999999999999974
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.83 E-value=3.9e-09 Score=99.76 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=64.7
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC-------c----cccc-ccccccCCCCC-Cccce
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG-------L----IGTY-HDWCEAFSTYP-RTYDL 246 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG-------l----ig~~-~d~~e~~~~yp-~sFDl 246 (332)
..++|||+|||.|+++..|++..- +..|+.+|. +.+++.|.++- + +-.+ .|. ..+...+ ++||+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~-~~~l~~~~~~fDv 160 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDG-VNFVNQTSQTFDV 160 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCS-CC---CCCCCEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChH-HHHHhhcCCCccE
Confidence 367999999999999999998732 125777888 88888887652 0 1111 111 1122334 89999
Q ss_pred eEehhhhccccccCCH--HHHHHHHHhhhcCCcEEEEEc
Q 020011 247 LHLDGLFTAESHRCDM--KFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 247 Vh~s~vf~h~~~~c~~--~~iL~EmdRVLRPGG~lii~d 283 (332)
|+++......+ ...+ ..++.++.|+|||||.+++..
T Consensus 161 Ii~D~~~p~~~-~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 161 IISDCTDPIGP-GESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEECC-----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCccCc-chhccHHHHHHHHHHhcCCCCEEEEec
Confidence 99964332211 1112 579999999999999999975
No 194
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.83 E-value=1.1e-08 Score=93.92 Aligned_cols=103 Identities=18% Similarity=0.049 Sum_probs=62.5
Q ss_pred cCCCCCCCCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhh----HHHHHhcCcc-cccccccccC--CCCCCcc
Q 020011 174 LPALGTDKIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANT----LAVVYDRGLI-GTYHDWCEAF--STYPRTY 244 (332)
Q Consensus 174 l~~l~~~~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~----l~~a~eRGli-g~~~d~~e~~--~~yp~sF 244 (332)
+..+......+|||+|||+|+++.+|++. +-.. .|.++|. +.+ ++.+.+|.-+ ....|-.... ...+.+|
T Consensus 69 l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G-~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~ 147 (232)
T 3id6_C 69 LKTNPIRKGTKVLYLGAASGTTISHVSDIIELNG-KAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENV 147 (232)
T ss_dssp CSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTS-EEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCE
T ss_pred hhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCC-EEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccce
Confidence 33333344688999999999999988874 1111 3566666 544 4556555322 1222221111 1123789
Q ss_pred ceeEehhhhccccccCCHHHHHH-HHHhhhcCCcEEEEEc
Q 020011 245 DLLHLDGLFTAESHRCDMKFVLL-EMDRILRPNGYVIVRE 283 (332)
Q Consensus 245 DlVh~s~vf~h~~~~c~~~~iL~-EmdRVLRPGG~lii~d 283 (332)
|+|+++..+ .+...++. .+.|+|||||.|+++-
T Consensus 148 D~I~~d~a~------~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 148 DVLYVDIAQ------PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp EEEEECCCC------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEecCCC------hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 999998433 24455554 5566999999999873
No 195
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.80 E-value=3.6e-09 Score=100.12 Aligned_cols=95 Identities=17% Similarity=0.092 Sum_probs=61.7
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhcCc-----------------ccc-cccccccCCCCC
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDRGL-----------------IGT-YHDWCEAFSTYP 241 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eRGl-----------------ig~-~~d~~e~~~~yp 241 (332)
..+|||+|||+|.++.+|+.. +.. ..|.++|. +.+++.|.++.- +-. ..|..+...+++
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQ-GRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTT-CEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 568999999999999999875 321 15677787 778877766421 111 122222122466
Q ss_pred -CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 242 -RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 242 -~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
++||+|+++.. ....++.++.|+|||||.+++..+.
T Consensus 185 ~~~fD~V~~~~~--------~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 185 SLTFDAVALDML--------NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ---EEEEEECSS--------STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CCCeeEEEECCC--------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 78999998631 1224899999999999999987765
No 196
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.80 E-value=3.7e-09 Score=93.52 Aligned_cols=92 Identities=13% Similarity=0.066 Sum_probs=64.2
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Cc-------ccc-cccccccCCCCC-Cccce
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GL-------IGT-YHDWCEAFSTYP-RTYDL 246 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Gl-------ig~-~~d~~e~~~~yp-~sFDl 246 (332)
..+|||+|||+|.++..|++. +.. ..|+++|. +.+++.+.++ |+ +-. ..|..+ .+.+ ++||+
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~fD~ 154 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCT-GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM--GYAEEAPYDA 154 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG--CCGGGCCEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc--CcccCCCcCE
Confidence 568999999999999999875 211 15677777 7777777654 21 111 112111 1233 78999
Q ss_pred eEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 247 LHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 247 Vh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
|++...++++ +.++.|+|||||.+++....
T Consensus 155 i~~~~~~~~~---------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVV---------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSC---------CHHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHH---------HHHHHHhcCCCcEEEEEEec
Confidence 9999887654 46889999999999998754
No 197
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.80 E-value=1.2e-09 Score=111.61 Aligned_cols=98 Identities=14% Similarity=0.110 Sum_probs=70.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc-cccc-ccccccC-CCCC-CccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL-IGTY-HDWCEAF-STYP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl-ig~~-~d~~e~~-~~yp-~sFDlVh~s~v 252 (332)
..+|||+|||.|.++..|+..|. +|+++|. +.++++|..+ |. ...| +.-.+.+ ..++ ++||+|.|..+
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga---~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGA---TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCeEEEECCCCcHHHHHHHhCCC---EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 45899999999999999999998 6899999 8889887654 42 1222 1111222 2455 89999999999
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
|+|+++...+. .+..+.+.|+++|..++..
T Consensus 144 ~ehv~~~~~~~-~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 144 FHHIVHLHGID-EVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHHHHHHHCHH-HHHHHHHHHHHHSSEEEEE
T ss_pred hhcCCCHHHHH-HHHHHHHHhccccceeeEE
Confidence 99998643332 3445777788887766544
No 198
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.80 E-value=1.1e-08 Score=100.25 Aligned_cols=116 Identities=17% Similarity=0.131 Sum_probs=71.0
Q ss_pred HHHHHHhhc-CCCCCCCCCeEEEecCcchHHHHHHhcCCC-eEEEEeecCc-hhhHHHHHhcCccc---ccccccccCCC
Q 020011 166 RVKHYKKLL-PALGTDKIRNVMDMNTLYGGFAAAVIDDPL-WVMNVVSSYA-ANTLAVVYDRGLIG---TYHDWCEAFST 239 (332)
Q Consensus 166 ~v~~y~~~l-~~l~~~~~r~VLD~GCG~Ggfaa~L~~~~v-~vmnv~p~d~-~~~l~~a~eRGlig---~~~d~~e~~~~ 239 (332)
|...|...| ......+...|||+|||+|.++...++.|. .|+.|..... ..+.+.+...|+-. .++.-.+. ..
T Consensus 67 Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~-~~ 145 (376)
T 4hc4_A 67 RTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVET-VE 145 (376)
T ss_dssp HHHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTT-CC
T ss_pred HHHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeee-ec
Confidence 455666544 111111356899999999999887777775 3444443322 33444555556632 22211122 24
Q ss_pred CCCccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEE
Q 020011 240 YPRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 240 yp~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~ 282 (332)
.|..||+|.|..+-+.+.....+..++...+|.|||||.++-+
T Consensus 146 lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 146 LPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp CSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred CCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 5688999998543333333346788999999999999998753
No 199
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.79 E-value=5.4e-09 Score=92.99 Aligned_cols=93 Identities=15% Similarity=0.122 Sum_probs=64.6
Q ss_pred CCeEEEecCcchHHHHHHhcC-CC----eEEEEeecCc-hhhHHHHHhcC---------c--ccccccccccCCCCC--C
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PL----WVMNVVSSYA-ANTLAVVYDRG---------L--IGTYHDWCEAFSTYP--R 242 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v----~vmnv~p~d~-~~~l~~a~eRG---------l--ig~~~d~~e~~~~yp--~ 242 (332)
..+|||+|||+|.+++.|++. +. ....|+.+|. +++++.+.++. . +-..+ +.....++ +
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~--~d~~~~~~~~~ 162 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE--GDGRKGYPPNA 162 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE--SCGGGCCGGGC
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE--CCcccCCCcCC
Confidence 468999999999999988873 21 0014667777 77777776542 1 11111 11122354 7
Q ss_pred ccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 243 TYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 243 sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+||+|++..+++|+. .++.|+|||||.+++....
T Consensus 163 ~fD~I~~~~~~~~~~---------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 163 PYNAIHVGAAAPDTP---------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp SEEEEEECSCBSSCC---------HHHHHTEEEEEEEEEEESC
T ss_pred CccEEEECCchHHHH---------HHHHHHhcCCCEEEEEEec
Confidence 899999998887753 6899999999999998754
No 200
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.79 E-value=7.9e-10 Score=109.85 Aligned_cols=124 Identities=10% Similarity=0.185 Sum_probs=77.2
Q ss_pred HHHHHhhcCCCCCCCCCeEEEecCc------chHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhcCccccccccccc
Q 020011 167 VKHYKKLLPALGTDKIRNVMDMNTL------YGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEA 236 (332)
Q Consensus 167 v~~y~~~l~~l~~~~~r~VLD~GCG------~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~ 236 (332)
...|..++..+.. ...+|||+||| +|+.+..+.++ +. .|+++|. +.+. .....+.-...|. +.
T Consensus 203 ~~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a---~V~GVDiSp~m~--~~~~rI~fv~GDa-~d 275 (419)
T 3sso_A 203 TPHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRG---QIYGLDIMDKSH--VDELRIRTIQGDQ-ND 275 (419)
T ss_dssp HHHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTC---EEEEEESSCCGG--GCBTTEEEEECCT-TC
T ss_pred HHHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCC---EEEEEECCHHHh--hcCCCcEEEEecc-cc
Confidence 3446555532332 35799999999 77766666543 33 5677777 5552 1111111011111 11
Q ss_pred CCCC-------CCccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh------------------hHHHHH
Q 020011 237 FSTY-------PRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS------------------YFIDAV 291 (332)
Q Consensus 237 ~~~y-------p~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~------------------~~~~~i 291 (332)
.+| .++||+|+|+.. +|. .+...+|.|+.|+|||||+|++.|-. .+++.+
T Consensus 276 -lpf~~~l~~~d~sFDlVisdgs-H~~---~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~l 350 (419)
T 3sso_A 276 -AEFLDRIARRYGPFDIVIDDGS-HIN---AHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLL 350 (419)
T ss_dssp -HHHHHHHHHHHCCEEEEEECSC-CCH---HHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHH
T ss_pred -cchhhhhhcccCCccEEEECCc-ccc---hhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHH
Confidence 123 289999999743 333 24678999999999999999997633 357888
Q ss_pred HHHHhcCccee
Q 020011 292 ATIAKGMKWSC 302 (332)
Q Consensus 292 ~~i~~~l~W~~ 302 (332)
+++...++|.-
T Consensus 351 k~l~D~l~~~~ 361 (419)
T 3sso_A 351 KSLIDAIQHQE 361 (419)
T ss_dssp HHHHHHHTGGG
T ss_pred HHHHHHhcccc
Confidence 88888777653
No 201
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.78 E-value=3.5e-09 Score=100.18 Aligned_cols=99 Identities=15% Similarity=0.054 Sum_probs=67.5
Q ss_pred CCCeEEEecCcc--hHHHHHHhc---CCCeEEEEeecCc-hhhHHHHHhcCc----------ccccccccccCCCCC---
Q 020011 181 KIRNVMDMNTLY--GGFAAAVID---DPLWVMNVVSSYA-ANTLAVVYDRGL----------IGTYHDWCEAFSTYP--- 241 (332)
Q Consensus 181 ~~r~VLD~GCG~--Ggfaa~L~~---~~v~vmnv~p~d~-~~~l~~a~eRGl----------ig~~~d~~e~~~~yp--- 241 (332)
.++.|||+|||+ +++...++. .+. .|+.+|. +.+|..+.++-- .+.+.++-. .+..|
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~a---rVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~-~l~~~~~~ 153 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPES---RVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPAS-ILDAPELR 153 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTC---EEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHH-HHTCHHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCC---EEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhh-hhcccccc
Confidence 478999999997 333333332 233 5788999 899988876511 111111100 00111
Q ss_pred Cccc-----eeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 242 RTYD-----LLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 242 ~sFD-----lVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
++|| .|.++.+|||+++..+...+|.++.+.|+|||+|++++
T Consensus 154 ~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 4565 58899999999876557899999999999999999985
No 202
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.77 E-value=1e-08 Score=97.14 Aligned_cols=120 Identities=16% Similarity=0.086 Sum_probs=72.3
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--ccccccccCCCCCCccceeEeh----
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TYHDWCEAFSTYPRTYDLLHLD---- 250 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~~d~~e~~~~yp~sFDlVh~s---- 250 (332)
..+|||+|||+|+++.+|++.-.-...|+++|. +.+++.+.++ |+.. ..+.-...+..++++||+|.++
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCC
Confidence 568999999999999999864100014678888 7788777665 4421 1111111222334789999984
Q ss_pred --hhhcccccc------C-------CHHHHHHHHHhhhcCCcEEEEEcCh----hHHHHHHHHHhcCcce
Q 020011 251 --GLFTAESHR------C-------DMKFVLLEMDRILRPNGYVIVRESS----YFIDAVATIAKGMKWS 301 (332)
Q Consensus 251 --~vf~h~~~~------c-------~~~~iL~EmdRVLRPGG~lii~d~~----~~~~~i~~i~~~l~W~ 301 (332)
.++.+.++. . ....+|.++.|+|||||.++++... +.-..++.+++...++
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 234332210 0 0147999999999999999996532 2233445555544433
No 203
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.76 E-value=5.4e-08 Score=84.62 Aligned_cols=117 Identities=9% Similarity=0.048 Sum_probs=80.3
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-cc-ccccccccCCCCCCccceeEehhhhccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-IG-TYHDWCEAFSTYPRTYDLLHLDGLFTAESH 258 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-ig-~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~ 258 (332)
..+|||+|||+|.++.+|++.+.. .++++|. +.+++.+.++-- .+ .+.-.+..+..+|.+||+|.++-.+++...
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSSSST
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCccccC
Confidence 568999999999999999988642 5788888 888888877631 11 111112223345689999999988776542
Q ss_pred cCCHHHHHHHHHhhhcCCcEEEEEc-ChhHHHHHHHHHhcCcceee
Q 020011 259 RCDMKFVLLEMDRILRPNGYVIVRE-SSYFIDAVATIAKGMKWSCH 303 (332)
Q Consensus 259 ~c~~~~iL~EmdRVLRPGG~lii~d-~~~~~~~i~~i~~~l~W~~~ 303 (332)
.....++.++.|+| ||.+++.- +....+.+.+.+....+++.
T Consensus 128 -~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 170 (207)
T 1wy7_A 128 -HADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVT 170 (207)
T ss_dssp -TTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEE
T ss_pred -CchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEE
Confidence 33457899999999 66655542 55556667777666666554
No 204
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.76 E-value=9.4e-09 Score=94.00 Aligned_cols=93 Identities=10% Similarity=0.056 Sum_probs=64.7
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Cccc---cc-ccccccCCCC------CCc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GLIG---TY-HDWCEAFSTY------PRT 243 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~-~d~~e~~~~y------p~s 243 (332)
.++|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+.. .+ .|..+.+..+ +++
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~---~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDG---KILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTC---EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 468999999999999988774 33 5677777 7777776654 4411 11 1111111112 478
Q ss_pred cceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 244 YDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 244 FDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
||+|++... ..+...++.++.|+|||||++++.+
T Consensus 157 fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 157 YDFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp BSEEEECSC------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 999998743 2356789999999999999999865
No 205
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.76 E-value=2.7e-08 Score=92.66 Aligned_cols=141 Identities=11% Similarity=0.029 Sum_probs=83.1
Q ss_pred CCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhcC------c----ccccccccccCCCC-CCcccee
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDRG------L----IGTYHDWCEAFSTY-PRTYDLL 247 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eRG------l----ig~~~d~~e~~~~y-p~sFDlV 247 (332)
..++|||+|||.|+++.++++. ++ ..|+.+|. +.+++.|.+.- + +-.++.-+..+... +++||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSV--KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTC--SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCC--ceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 3579999999999999999987 44 25677777 78888887642 2 11111101112222 3899999
Q ss_pred Eehhhhcccccc-CCHHHHHHHHHhhhcCCcEEEEEcCh-----hHHHHHHHHHhcCcceeeeccc--ccc-cccceEEE
Q 020011 248 HLDGLFTAESHR-CDMKFVLLEMDRILRPNGYVIVRESS-----YFIDAVATIAKGMKWSCHKEDT--EYG-VEKEKLLL 318 (332)
Q Consensus 248 h~s~vf~h~~~~-c~~~~iL~EmdRVLRPGG~lii~d~~-----~~~~~i~~i~~~l~W~~~~~~~--e~~-~~~e~~li 318 (332)
+++......+.. -....++.++.|+|||||.+++.... +.+..+.+..++.=-.+..... ..- .+.-.+++
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ 232 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTI 232 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEE
Confidence 996433221110 01257999999999999999998532 2334444434433222332211 110 12345788
Q ss_pred EEecc
Q 020011 319 CQKKL 323 (332)
Q Consensus 319 ~~K~~ 323 (332)
+.|.+
T Consensus 233 ask~~ 237 (275)
T 1iy9_A 233 GSKKY 237 (275)
T ss_dssp EESSC
T ss_pred eeCCC
Confidence 88863
No 206
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.76 E-value=3.1e-08 Score=94.65 Aligned_cols=134 Identities=13% Similarity=0.021 Sum_probs=83.9
Q ss_pred CCCeEEEecCcchHHHHHHhcCC---CeEEEEeecCc-hhhHHHHHhc----Ccc--cccccccccCCCCC-CccceeEe
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDP---LWVMNVVSSYA-ANTLAVVYDR----GLI--GTYHDWCEAFSTYP-RTYDLLHL 249 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~---v~vmnv~p~d~-~~~l~~a~eR----Gli--g~~~d~~e~~~~yp-~sFDlVh~ 249 (332)
...+|||+|||+|+++..++... . .+.++|. +.+++.|.++ |+. -..+.-...+ +.+ .+||+|+|
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~---~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~-~~~~~~~D~Ii~ 278 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTS---PVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHL-PRFFPEVDRILA 278 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTS---CEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGG-GGTCCCCSEEEE
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCc---eEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhC-ccccCCCCEEEE
Confidence 35789999999999998887742 3 4678888 8888877765 432 1111101112 244 77999999
Q ss_pred hhhhccc-ccc----CCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCcceeeeccc-ccccccceEEEEEe
Q 020011 250 DGLFTAE-SHR----CDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHKEDT-EYGVEKEKLLLCQK 321 (332)
Q Consensus 250 s~vf~h~-~~~----c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~~~~~~-e~~~~~e~~li~~K 321 (332)
+--+..- .+. .....++.++.|+|||||.+++..+... .++.+.+ ..|+...... .+|.-.-.+++.+|
T Consensus 279 npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~--~~~~~~~-~g~~~~~~~~l~~g~l~~~i~vl~r 353 (354)
T 3tma_A 279 NPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPA--LLKRALP-PGFALRHARVVEQGGVYPRVFVLEK 353 (354)
T ss_dssp CCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHH--HHHHHCC-TTEEEEEEEECCBTTBCCEEEEEEE
T ss_pred CCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHH--HHHHHhh-cCcEEEEEEEEEeCCEEEEEEEEEc
Confidence 6443321 100 1125799999999999999999887763 2455555 6676643322 23333345666665
No 207
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.75 E-value=7e-09 Score=91.74 Aligned_cols=95 Identities=11% Similarity=0.071 Sum_probs=65.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCC----eEEEEeecCc-hhhHHHHHhc----Cc----ccccccc-cccCCC-----CC-
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPL----WVMNVVSSYA-ANTLAVVYDR----GL----IGTYHDW-CEAFST-----YP- 241 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v----~vmnv~p~d~-~~~l~~a~eR----Gl----ig~~~d~-~e~~~~-----yp- 241 (332)
..+|||+|||+|.++..|++... -...|+++|. +.+++.+.++ |+ ...+.-. +..... ++
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 160 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKEL 160 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccC
Confidence 46899999999999999987531 0014677777 7788777665 31 1111101 111122 34
Q ss_pred CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 242 RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 242 ~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
.+||+|++...++|+ +.++.++|||||.+++..+.
T Consensus 161 ~~fD~I~~~~~~~~~---------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 161 GLFDAIHVGASASEL---------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCEEEEEECSBBSSC---------CHHHHHHEEEEEEEEEEEEE
T ss_pred CCcCEEEECCchHHH---------HHHHHHhcCCCcEEEEEEcc
Confidence 889999999888764 47889999999999998764
No 208
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.75 E-value=1.6e-08 Score=95.92 Aligned_cols=139 Identities=13% Similarity=0.024 Sum_probs=82.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC-------c----cccc-ccccccCCCC-CCcccee
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG-------L----IGTY-HDWCEAFSTY-PRTYDLL 247 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG-------l----ig~~-~d~~e~~~~y-p~sFDlV 247 (332)
.++|||+|||.|+++..|++..- +..|+.+|. +.+++.+.++- + +-.+ .|. ..+.+. +++||+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~-~~~l~~~~~~fD~I 155 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDA-RAYLERTEERYDVV 155 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCH-HHHHHHCCCCEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchH-HHHHHhcCCCccEE
Confidence 57999999999999999998731 135677888 78888887642 1 0011 111 112222 4899999
Q ss_pred Eehhhhcc---ccc-cCCHHHHHHHHHhhhcCCcEEEEEcCh------hHHHHHHHHHhcCcceeeeccc--ccccccce
Q 020011 248 HLDGLFTA---ESH-RCDMKFVLLEMDRILRPNGYVIVRESS------YFIDAVATIAKGMKWSCHKEDT--EYGVEKEK 315 (332)
Q Consensus 248 h~s~vf~h---~~~-~c~~~~iL~EmdRVLRPGG~lii~d~~------~~~~~i~~i~~~l~W~~~~~~~--e~~~~~e~ 315 (332)
+++...+. -+. .-....++.++.|+|||||.+++.... +....+.+..+..--.+..... ....+.-.
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~~ 235 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFG 235 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeEE
Confidence 99754432 110 001367999999999999999987422 2344444444443222322211 11112345
Q ss_pred EEEEEec
Q 020011 316 LLLCQKK 322 (332)
Q Consensus 316 ~li~~K~ 322 (332)
++++.|.
T Consensus 236 ~~~as~~ 242 (314)
T 1uir_A 236 FLLASDA 242 (314)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 7888886
No 209
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.74 E-value=3.4e-08 Score=89.40 Aligned_cols=93 Identities=10% Similarity=0.038 Sum_probs=64.6
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Cccc---cc-ccccccCCCC------CCc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GLIG---TY-HDWCEAFSTY------PRT 243 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~-~d~~e~~~~y------p~s 243 (332)
.++|||+|||+|..+..|++. +. .++.+|. +.+++.|.++ |+.. .+ .|..+.+..+ +++
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDG---KITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 568999999999999888764 33 5677777 7777777654 4421 11 1111111122 378
Q ss_pred cceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 244 YDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 244 FDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
||+|++...- .+...++.++.|+|||||++++.+
T Consensus 148 fD~I~~d~~~------~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDADK------PNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEEECSCG------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEECCch------HHHHHHHHHHHHhcCCCeEEEEec
Confidence 9999987422 245689999999999999999976
No 210
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.74 E-value=7.3e-09 Score=103.40 Aligned_cols=98 Identities=11% Similarity=0.104 Sum_probs=66.5
Q ss_pred CCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHH-------Hhc----Cc-ccccccc-cccCC---CC--
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVV-------YDR----GL-IGTYHDW-CEAFS---TY-- 240 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a-------~eR----Gl-ig~~~d~-~e~~~---~y-- 240 (332)
...+|||+|||+|.++..|++. +. ..|+++|. +.++..| .++ |+ ...+.-. +..+. +|
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~--~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGC--ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC--SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccc
Confidence 3578999999999999999885 42 14677777 6666665 443 42 1211111 11221 12
Q ss_pred -CCccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 241 -PRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 241 -p~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
..+||+|+++.++ +. .++..+|.|+.|+|||||.+++.++
T Consensus 320 ~~~~FDvIvvn~~l-~~---~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 320 LIPQCDVILVNNFL-FD---EDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp HGGGCSEEEECCTT-CC---HHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred ccCCCCEEEEeCcc-cc---ccHHHHHHHHHHhCCCCeEEEEeec
Confidence 2789999998666 22 2466789999999999999999864
No 211
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.73 E-value=2.1e-08 Score=95.66 Aligned_cols=100 Identities=13% Similarity=0.133 Sum_probs=64.1
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC------c-ccccccccc---cCCCCC-CccceeEe
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG------L-IGTYHDWCE---AFSTYP-RTYDLLHL 249 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG------l-ig~~~d~~e---~~~~yp-~sFDlVh~ 249 (332)
.++|||+|||.|+++..|++..- ...|+.+|. +.+++.|.++- + ...+.-.+. .+...+ ++||+|++
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 57999999999999999988731 136788888 88998888752 1 000110111 112223 89999998
Q ss_pred hhhhccccccCCH--HHHHHHHHhhhcCCcEEEEEc
Q 020011 250 DGLFTAESHRCDM--KFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 250 s~vf~h~~~~c~~--~~iL~EmdRVLRPGG~lii~d 283 (332)
+. +.++.....+ ..++.++.|+|||||.+++..
T Consensus 188 d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CC-C-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 64 3333211112 579999999999999999975
No 212
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.73 E-value=1.7e-08 Score=96.76 Aligned_cols=116 Identities=15% Similarity=0.103 Sum_probs=74.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc----ccccccccCCCC----CCccceeE
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG----TYHDWCEAFSTY----PRTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig----~~~d~~e~~~~y----p~sFDlVh 248 (332)
..+|||+|||+|+|+.+++..+. .|+.+|. +.+++.+.++ |+.. .++.-+..+... .++||+|.
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 46899999999999999999876 6788898 8888887765 3321 111101111211 36899999
Q ss_pred ehhh----------hccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-------hHHHHHHHHHhcCcceee
Q 020011 249 LDGL----------FTAESHRCDMKFVLLEMDRILRPNGYVIVRESS-------YFIDAVATIAKGMKWSCH 303 (332)
Q Consensus 249 ~s~v----------f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-------~~~~~i~~i~~~l~W~~~ 303 (332)
++-- +++. .+...++.++.|+|||||+|++.... .+.+.+++.++....++.
T Consensus 231 ~dPP~~~~~~~~~~~~~~---~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLF---DHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp ECCCSEEECTTCCEEEHH---HHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred ECCccccCCchHHHHHHH---HHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 8421 1111 13567999999999999997775522 223344444445555443
No 213
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.73 E-value=3.2e-08 Score=92.44 Aligned_cols=101 Identities=19% Similarity=0.208 Sum_probs=68.2
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-c---------ccc-ccccccCCC-CCCcccee
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-I---------GTY-HDWCEAFST-YPRTYDLL 247 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-i---------g~~-~d~~e~~~~-yp~sFDlV 247 (332)
..++|||+|||.|+++..+++..- +..++.+|. +.+++.+.++-- . -.+ .|. ..+.. .+++||+|
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~-~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDA-SKFLENVTNTYDVI 155 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCH-HHHHHHCCSCEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECCh-HHHHHhCCCCceEE
Confidence 357999999999999999988742 236778888 888888877521 0 011 111 11111 25899999
Q ss_pred EehhhhccccccCCH--HHHHHHHHhhhcCCcEEEEEcC
Q 020011 248 HLDGLFTAESHRCDM--KFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 248 h~s~vf~h~~~~c~~--~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+++....+.+. ..+ ..++.++.|+|||||.+++...
T Consensus 156 i~d~~~~~~~~-~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 156 IVDSSDPIGPA-ETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEECCCTTTGG-GGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEcCCCCCCcc-hhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 99643322121 122 5899999999999999999854
No 214
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.71 E-value=3.2e-08 Score=94.37 Aligned_cols=139 Identities=17% Similarity=0.133 Sum_probs=82.2
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhcCcc-------ccccccccc---CCC-CCCccceeE
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDRGLI-------GTYHDWCEA---FST-YPRTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eRGli-------g~~~d~~e~---~~~-yp~sFDlVh 248 (332)
..+|||+|||.|+++..+++. +. ..|+.+|. +.+++.|.++--. ..++-.+.. +.. .+++||+|+
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 478999999999999999987 33 36778888 8899888875210 001101111 112 248899999
Q ss_pred ehhhhccccccCCH--HHHHHHHHhhhcCCcEEEEEcCh-----hHHHHHHHHHhcCcceeeecccc--ccc-ccceEEE
Q 020011 249 LDGLFTAESHRCDM--KFVLLEMDRILRPNGYVIVRESS-----YFIDAVATIAKGMKWSCHKEDTE--YGV-EKEKLLL 318 (332)
Q Consensus 249 ~s~vf~h~~~~c~~--~~iL~EmdRVLRPGG~lii~d~~-----~~~~~i~~i~~~l~W~~~~~~~e--~~~-~~e~~li 318 (332)
++.. .++...... ..++.++.|+|||||.+++.... +.+..+.+..+..--.+..+... .-+ +.-.+++
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~ 273 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILC 273 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEE
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEE
Confidence 8642 222111111 68999999999999999996432 23333433333332333332111 111 1234778
Q ss_pred EEecc
Q 020011 319 CQKKL 323 (332)
Q Consensus 319 ~~K~~ 323 (332)
+.|.+
T Consensus 274 as~~~ 278 (321)
T 2pt6_A 274 CSKTD 278 (321)
T ss_dssp EESST
T ss_pred eeCCC
Confidence 88764
No 215
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.69 E-value=1.7e-08 Score=94.96 Aligned_cols=99 Identities=8% Similarity=0.072 Sum_probs=65.0
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhcC------c----cccc-ccccccCCCC-CCcccee
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDRG------L----IGTY-HDWCEAFSTY-PRTYDLL 247 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eRG------l----ig~~-~d~~e~~~~y-p~sFDlV 247 (332)
..+|||+|||.|+++..+++. +. ..|+.+|. +.+++.+.++- + +-.+ .|. ..+... +++||+|
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~-~~~l~~~~~~fD~I 167 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSV--EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANG-AEYVRKFKNEFDVI 167 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTC--SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH-HHHGGGCSSCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH-HHHHhhCCCCceEE
Confidence 478999999999999999987 33 25677887 78888887652 1 0111 111 112223 3889999
Q ss_pred Eehhhhcc-ccccC--CHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 248 HLDGLFTA-ESHRC--DMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 248 h~s~vf~h-~~~~c--~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+++.. .+ ..... ....++.++.|+|||||.+++...
T Consensus 168 i~d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 168 IIDST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEEC-----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEcCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 98632 22 21100 125799999999999999999753
No 216
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.68 E-value=1.2e-08 Score=98.13 Aligned_cols=102 Identities=16% Similarity=0.124 Sum_probs=68.0
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC------c----cc-ccccccccCCCCC-Ccccee
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG------L----IG-TYHDWCEAFSTYP-RTYDLL 247 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG------l----ig-~~~d~~e~~~~yp-~sFDlV 247 (332)
..++|||+|||.|.++..|++..- +..|+.+|. +.+++.|.++- + +- ...|..+.+..++ ++||+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 357999999999999999998731 135778888 88888887652 2 11 1112111122345 899999
Q ss_pred Eehhhhcc-ccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 248 HLDGLFTA-ESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 248 h~s~vf~h-~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+++..... ....-....++.++.|+|||||.|++..
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99643111 1111013579999999999999999973
No 217
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.68 E-value=4e-09 Score=95.19 Aligned_cols=100 Identities=11% Similarity=0.034 Sum_probs=58.6
Q ss_pred CCCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhc----Cccc---ccc-cccc-cCCCCC----Ccc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDR----GLIG---TYH-DWCE-AFSTYP----RTY 244 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~~-d~~e-~~~~yp----~sF 244 (332)
...+|||+|||+|.++..|+.+ +. .|+++|. +.+++.|.++ |+.. .++ |..+ .+.+++ ++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGW---YFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcc
Confidence 3568999999999999888765 33 5788888 8888887765 3321 121 1111 112344 489
Q ss_pred ceeEehhhhccccc-------c-----CCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 245 DLLHLDGLFTAESH-------R-----CDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 245 DlVh~s~vf~h~~~-------~-----c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
|+|.|+-.+.+... + .....++.++.|+|||||.+.+.+
T Consensus 142 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp SEEEECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred cEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 99999855443220 0 011245678888888888765543
No 218
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.66 E-value=2.1e-08 Score=96.45 Aligned_cols=100 Identities=12% Similarity=-0.000 Sum_probs=67.0
Q ss_pred CeEEEecCcchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcC-cc-----ccc-ccccccCCCCC-CccceeEehhh
Q 020011 183 RNVMDMNTLYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRG-LI-----GTY-HDWCEAFSTYP-RTYDLLHLDGL 252 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRG-li-----g~~-~d~~e~~~~yp-~sFDlVh~s~v 252 (332)
.+|||+|||.|+++.+|++ .+-. .|+.+|. +.+++.+.++- +. -.+ .|-.+-+..++ ++||+|++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~--~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQS--RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTC--EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS
T ss_pred CEEEEEECCcCHHHHHHHHHCCCc--EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC
Confidence 4899999999999999998 3321 5677777 88999888762 21 111 11111122466 89999998643
Q ss_pred hccccc-cCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 253 FTAESH-RCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 253 f~h~~~-~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
...... .-.-..++.++.|+|||||.|++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 322111 01115799999999999999998663
No 219
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.65 E-value=3.7e-08 Score=91.23 Aligned_cols=113 Identities=12% Similarity=-0.002 Sum_probs=74.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--ccccccccCCCCCCccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TYHDWCEAFSTYPRTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~~d~~e~~~~yp~sFDlVh~s~vf~ 254 (332)
..+|||+|||+|+|+..|+++.. ...|+++|. +.+++.+.++ |+.. .++.-+..+ +.+.+||+|.++...
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRVIMGYVH- 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEEEECCCS-
T ss_pred CCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEEEECCcc-
Confidence 56899999999999999988631 124677777 7788777654 3321 111111122 234789999988432
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEcChh------HH-HHHHHHHhcCcceee
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRESSY------FI-DAVATIAKGMKWSCH 303 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~------~~-~~i~~i~~~l~W~~~ 303 (332)
....++.++.|+|||||.++++.... .. +.++.+.+.+.+++.
T Consensus 197 ------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred ------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 45679999999999999999987542 23 334444554444443
No 220
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.64 E-value=2.2e-08 Score=94.90 Aligned_cols=102 Identities=17% Similarity=0.137 Sum_probs=65.3
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc------Cc----ccccccccccCCCCC-CccceeE
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR------GL----IGTYHDWCEAFSTYP-RTYDLLH 248 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR------Gl----ig~~~d~~e~~~~yp-~sFDlVh 248 (332)
..++|||+|||+|.++..|++..- +..|+.+|. +.+++.|.++ |+ +-.++.-+..+.+.+ ++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 357999999999999999998741 125677888 8888888764 11 111110011122234 8999999
Q ss_pred ehhhhcccccc-CCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 249 LDGLFTAESHR-CDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 249 ~s~vf~h~~~~-c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
++......+.. -....++.++.|+|||||.+++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 96433211100 012468999999999999999976
No 221
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.64 E-value=5.5e-08 Score=95.60 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=66.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccccc--ccccccCCCCCCccceeEehhhh-
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTY--HDWCEAFSTYPRTYDLLHLDGLF- 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~--~d~~e~~~~yp~sFDlVh~s~vf- 253 (332)
..+|||+|||+|+|+.+++..+. .|+++|. +.+++.+.++ |+...+ .|..+.+..+++.||+|+++--.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga---~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGA---YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 56899999999999999999876 3788888 8888877665 443211 12111122235449999986211
Q ss_pred ccccc-----cCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 254 TAESH-----RCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 254 ~h~~~-----~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
..-.. ......++.++.|+|||||+|++...
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 10000 01235789999999999999997664
No 222
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.63 E-value=1.4e-07 Score=87.62 Aligned_cols=92 Identities=12% Similarity=0.091 Sum_probs=63.6
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC------ccc-ccccccccCCCCCCccceeEehhh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG------LIG-TYHDWCEAFSTYPRTYDLLHLDGL 252 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG------lig-~~~d~~e~~~~yp~sFDlVh~s~v 252 (332)
..++|||+|||.|+++..+++.+ ..|+.+|. +.+++.|.++- +.. .+.-.+.....|.++||+|.++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~- 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQ- 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESS-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECC-
Confidence 35799999999999999998874 26777887 77888776541 100 01001111122338899999872
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. +...++.++.|+|||||.+++..
T Consensus 148 ----~---dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 ----E---PDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ----C---CCHHHHHHHHTTEEEEEEEEEEE
T ss_pred ----C---ChHHHHHHHHHhcCCCcEEEEEc
Confidence 2 22358999999999999999964
No 223
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.61 E-value=1.6e-08 Score=94.59 Aligned_cols=97 Identities=10% Similarity=0.088 Sum_probs=62.6
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC----cccccccccccCCCCC-CccceeEeh----
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG----LIGTYHDWCEAFSTYP-RTYDLLHLD---- 250 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG----lig~~~d~~e~~~~yp-~sFDlVh~s---- 250 (332)
...+|||+|||+|.++.+|++.+. .|+++|. +++++.+.++- +...++-.+..+..++ .+||+|+++
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKAK---KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQ 104 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCCCCSEEEEECCGG
T ss_pred CCCEEEEEcCcccHHHHHHHhhCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccchhhcEEEEecCcc
Confidence 357899999999999999998865 5678888 88888887652 2111211223334445 689999996
Q ss_pred -------hhhccccccCCHHH-HHHHH--HhhhcCCcEEE
Q 020011 251 -------GLFTAESHRCDMKF-VLLEM--DRILRPNGYVI 280 (332)
Q Consensus 251 -------~vf~h~~~~c~~~~-iL~Em--dRVLRPGG~li 280 (332)
.+|+|.++...... +-.|+ +|+|||||.++
T Consensus 105 ~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 105 ISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 45555432110000 11455 48999999875
No 224
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.60 E-value=3.3e-08 Score=91.49 Aligned_cols=99 Identities=14% Similarity=0.165 Sum_probs=63.8
Q ss_pred CCeEEEecCcchHHHHHHhc--CCCeEEEEeecCc-hhhHHHHHhc----Cccc--cc-ccccccCCCC----CCcccee
Q 020011 182 IRNVMDMNTLYGGFAAAVID--DPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TY-HDWCEAFSTY----PRTYDLL 247 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~--~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~-~d~~e~~~~y----p~sFDlV 247 (332)
..+|||+|||+|+++.+|++ .+. ..|+++|. +.+++.+.++ |+.. .+ .|. ..+... +++||+|
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~--~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~-~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNK--GTIVAVEISKTRTKALKSNINRMGVLNTIIINADM-RKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCH-HHHHHHHHHTTCCEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCC--CEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCCh-HhcchhhhhccccCCEE
Confidence 56899999999999999987 331 14677777 7777776665 4421 11 111 111111 4789999
Q ss_pred Eeh------hhhcccc---------ccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 248 HLD------GLFTAES---------HRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 248 h~s------~vf~h~~---------~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.++ .++.+-+ -......+|.++.|+|||||.++++.
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 987 2222100 00234679999999999999999976
No 225
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.58 E-value=2e-07 Score=88.37 Aligned_cols=128 Identities=12% Similarity=0.098 Sum_probs=72.8
Q ss_pred CCeEEEecC------cchH-HHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCccc-ccccccccCCCCCCccceeEehhh
Q 020011 182 IRNVMDMNT------LYGG-FAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIG-TYHDWCEAFSTYPRTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GC------G~Gg-faa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig-~~~d~~e~~~~yp~sFDlVh~s~v 252 (332)
..+|||+|| |+|+ .++.+...+. .|+++|. +. + .++.- ...|+.+ .+++++||+|+|+..
T Consensus 64 g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~---~V~gvDis~~-v-----~~v~~~i~gD~~~--~~~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGTAVLRQWLPTGT---LLVDSDLNDF-V-----SDADSTLIGDCAT--VHTANKWDLIISDMY 132 (290)
T ss_dssp TCEEEEESCCCTTSBCHHHHHHHHHSCTTC---EEEEEESSCC-B-----CSSSEEEESCGGG--CCCSSCEEEEEECCC
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHcCCCC---EEEEEECCCC-C-----CCCEEEEECcccc--CCccCcccEEEEcCC
Confidence 568999999 5587 2222222223 4566776 43 1 12222 2233322 234589999999743
Q ss_pred hc--------cccccCCHHHHHHHHHhhhcCCcEEEEEcCh-hHHHHHHHHHhcCcc-eeeecccccccccceEEEEEe
Q 020011 253 FT--------AESHRCDMKFVLLEMDRILRPNGYVIVRESS-YFIDAVATIAKGMKW-SCHKEDTEYGVEKEKLLLCQK 321 (332)
Q Consensus 253 f~--------h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-~~~~~i~~i~~~l~W-~~~~~~~e~~~~~e~~li~~K 321 (332)
.+ |.........++.++.|+|||||.|++.... .....+..+++...+ .+... +-.....|-+|+++.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~-asr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVT-NVNASSSEAFLIGAN 210 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEE-GGGTTSSCEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEE-EcCCCchheEEecCC
Confidence 22 1111122457999999999999999996532 223466666666634 34443 111124677888875
No 226
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.57 E-value=2.1e-07 Score=87.75 Aligned_cols=137 Identities=12% Similarity=0.094 Sum_probs=90.7
Q ss_pred cccccccchhhHHHHHHHHHhhcCCCCCCCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc
Q 020011 152 SASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL 226 (332)
Q Consensus 152 ~~~~F~~d~~~W~~~v~~y~~~l~~l~~~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl 226 (332)
+..+|..+...-+.++..+ +++ ..+|||+|||+|+|+..++.++. ..|..+|. +.+++.+.+. |+
T Consensus 104 ~k~~f~~~~~~er~ri~~~------~~~--g~~VlD~~aG~G~~~i~~a~~g~--~~V~avD~np~a~~~~~~N~~~N~v 173 (278)
T 3k6r_A 104 AKIMFSPANVKERVRMAKV------AKP--DELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKV 173 (278)
T ss_dssp TTSCCCGGGHHHHHHHHHH------CCT--TCEEEETTCTTTTTTHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTC
T ss_pred cceEEcCCcHHHHHHHHHh------cCC--CCEEEEecCcCcHHHHHHHHhcC--CeEEEEECCHHHHHHHHHHHHHcCC
Confidence 4566777777777776544 333 56899999999999988887764 14677777 7777766554 44
Q ss_pred ccccccccccCCCCC--CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC-------hhHHHHHHHHHhc
Q 020011 227 IGTYHDWCEAFSTYP--RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES-------SYFIDAVATIAKG 297 (332)
Q Consensus 227 ig~~~d~~e~~~~yp--~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~-------~~~~~~i~~i~~~ 297 (332)
-+.+.-.+.....|+ ..||.|..+.. .....+|.+..++|||||++.+-.. .+..+.++++++.
T Consensus 174 ~~~v~~~~~D~~~~~~~~~~D~Vi~~~p-------~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~ 246 (278)
T 3k6r_A 174 EDRMSAYNMDNRDFPGENIADRILMGYV-------VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKE 246 (278)
T ss_dssp TTTEEEECSCTTTCCCCSCEEEEEECCC-------SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHH
T ss_pred CCcEEEEeCcHHHhccccCCCEEEECCC-------CcHHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHH
Confidence 332221122222343 88999887622 2234678888899999999876432 2346778888888
Q ss_pred Ccceeeec
Q 020011 298 MKWSCHKE 305 (332)
Q Consensus 298 l~W~~~~~ 305 (332)
..+++...
T Consensus 247 ~g~~v~~~ 254 (278)
T 3k6r_A 247 YGYDVEKL 254 (278)
T ss_dssp TTCEEEEE
T ss_pred cCCcEEEE
Confidence 88876543
No 227
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.56 E-value=1.7e-07 Score=90.47 Aligned_cols=114 Identities=9% Similarity=-0.019 Sum_probs=74.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc--cccc-ccccccCCC-CCCccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL--IGTY-HDWCEAFST-YPRTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl--ig~~-~d~~e~~~~-yp~sFDlVh~s~v 252 (332)
..+|||+| |+|.++..|+..+.. ..|+++|. +.+++.|.++ |+ +-.+ .|..+.+.. ++++||+|.++..
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~-~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLP-KRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 57899999 999999999876431 15788898 8899888776 54 1111 222111221 1268999999976
Q ss_pred hccccccCCHHHHHHHHHhhhcCCc-EEEEEcCh--h---HHHHHHHHHh-cCcce
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNG-YVIVRESS--Y---FIDAVATIAK-GMKWS 301 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG-~lii~d~~--~---~~~~i~~i~~-~l~W~ 301 (332)
+++. ....++.++.|+||||| .+++.-.. . .+..+++++. .+...
T Consensus 251 ~~~~----~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 302 (373)
T 2qm3_A 251 ETLE----AIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVV 302 (373)
T ss_dssp SSHH----HHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCE
T ss_pred CchH----HHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcc
Confidence 6543 14789999999999999 33444332 2 2255666555 44443
No 228
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.55 E-value=2.4e-07 Score=84.96 Aligned_cols=132 Identities=10% Similarity=0.096 Sum_probs=90.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccccccc-ccccCCCCC-C-ccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHD-WCEAFSTYP-R-TYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d-~~e~~~~yp-~-sFDlVh~s~vf 253 (332)
..+|||+|||+|.++.+|+..+. .-.|+++|. +.+++.|.+. |+...+.- .+..+..++ . .||+|.....-
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~G 94 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGMG 94 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCCC
Confidence 36899999999999999998763 235778888 7787777655 44321111 123345666 4 69988865432
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCcceeeeccc--ccccccceEEEEEe
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHKEDT--EYGVEKEKLLLCQK 321 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~~~~~~--e~~~~~e~~li~~K 321 (332)
. ..+..+|.+..+.|+|+|+||++... -...+++.+....|.+..... |++- --.|+++.+
T Consensus 95 g-----~~i~~Il~~~~~~L~~~~~lVlq~~~-~~~~vr~~L~~~Gf~i~~e~lv~e~~~-~Yeii~~~~ 157 (225)
T 3kr9_A 95 G-----RLIARILEEGLGKLANVERLILQPNN-REDDLRIWLQDHGFQIVAESILEEAGK-FYEILVVEA 157 (225)
T ss_dssp H-----HHHHHHHHHTGGGCTTCCEEEEEESS-CHHHHHHHHHHTTEEEEEEEEEEETTE-EEEEEEEEE
T ss_pred h-----HHHHHHHHHHHHHhCCCCEEEEECCC-CHHHHHHHHHHCCCEEEEEEEEEECCE-EEEEEEEEe
Confidence 1 23568999999999999999998774 457888888888898776532 2211 124666654
No 229
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.55 E-value=8.4e-08 Score=91.38 Aligned_cols=141 Identities=11% Similarity=0.006 Sum_probs=87.4
Q ss_pred CCCeEEEecCcchHHHHHHhcCCC----eEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCC-CccceeEeh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPL----WVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYP-RTYDLLHLD 250 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v----~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp-~sFDlVh~s 250 (332)
...+|||.|||+|+|+..+++... ...++.++|. +.++.+|..+ |+...+. .+..+.+.+ .+||+|.++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~-~~D~l~~~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLL-HQDGLANLLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEE-ESCTTSCCCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEE-ECCCCCccccCCccEEEEC
Confidence 357899999999999988876421 1147888988 8888887764 4421111 122344555 899999999
Q ss_pred hhhccccccC--------------CH-HHHHHHHHhhhcCCcEEEEEcChh-----HHHHHHHHHhcCccee-eecccc-
Q 020011 251 GLFTAESHRC--------------DM-KFVLLEMDRILRPNGYVIVRESSY-----FIDAVATIAKGMKWSC-HKEDTE- 308 (332)
Q Consensus 251 ~vf~h~~~~c--------------~~-~~iL~EmdRVLRPGG~lii~d~~~-----~~~~i~~i~~~l~W~~-~~~~~e- 308 (332)
--|++++... +. ..++.++.+.|||||.+++..+.. .-..+++....-.+-. .+.-..
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii~lp~~ 288 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPET 288 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEEECCGG
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEeeeCChh
Confidence 8876653210 01 148999999999999999887432 2345555544434422 121111
Q ss_pred --cc-cccceEEEEEec
Q 020011 309 --YG-VEKEKLLLCQKK 322 (332)
Q Consensus 309 --~~-~~~e~~li~~K~ 322 (332)
.+ ....-|+|.+|.
T Consensus 289 ~F~~~~~~~~i~vl~k~ 305 (344)
T 2f8l_A 289 LFKSEQARKSILILEKA 305 (344)
T ss_dssp GSCC-CCCEEEEEEEEC
T ss_pred hccCCCCceEEEEEECC
Confidence 11 134567777774
No 230
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.53 E-value=1.1e-07 Score=92.59 Aligned_cols=99 Identities=19% Similarity=0.251 Sum_probs=67.6
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cc-cccccccccc---CCC-C---CCccceeE
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GL-IGTYHDWCEA---FST-Y---PRTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gl-ig~~~d~~e~---~~~-y---p~sFDlVh 248 (332)
..+|||+|||+|+|+.+++..+. -.|+++|. +.+++.|.+. |+ ...+.-.+.. +.+ + ..+||+|+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~--~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGC--SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 46899999999999999999863 25677888 7788777654 44 2111111111 111 1 36899999
Q ss_pred ehh---------hhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 249 LDG---------LFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 249 ~s~---------vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
++- ++++. .....++.++.++|+|||+++++...
T Consensus 299 ~dpP~~~~~~~~~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGAC---RGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ECCSSTTTCSSSSSCCC---THHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhHHHHHH---HHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 972 11111 34578999999999999999997754
No 231
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.51 E-value=1.3e-07 Score=92.17 Aligned_cols=118 Identities=15% Similarity=0.087 Sum_probs=73.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc-cccccccc---CCC-C---CCccceeE
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG-TYHDWCEA---FST-Y---PRTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig-~~~d~~e~---~~~-y---p~sFDlVh 248 (332)
..+|||+|||+|+|+.+++..+.. .|+++|. +.+++.|.+. |+.. .+.-.+.. +++ . ..+||+|+
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~--~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAM--ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBS--EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 468999999999999999987641 4677777 7787777654 4321 11111111 111 1 25899999
Q ss_pred ehhhh-----ccccc-cCCHHHHHHHHHhhhcCCcEEEEEcChh------HHHHHHHHHhcCcce
Q 020011 249 LDGLF-----TAESH-RCDMKFVLLEMDRILRPNGYVIVRESSY------FIDAVATIAKGMKWS 301 (332)
Q Consensus 249 ~s~vf-----~h~~~-~c~~~~iL~EmdRVLRPGG~lii~d~~~------~~~~i~~i~~~l~W~ 301 (332)
++--. .+..+ ...+..++.++.++|+|||+|+++.... ..+.++..+.....+
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 85211 11110 0123457888999999999999987542 344555556555554
No 232
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.51 E-value=1.4e-07 Score=91.43 Aligned_cols=101 Identities=22% Similarity=0.205 Sum_probs=66.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--ccccccccCCC-C---CCccceeEeh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TYHDWCEAFST-Y---PRTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~~d~~e~~~~-y---p~sFDlVh~s 250 (332)
..+|||+|||+|+|+.+++.. ...|+++|. +.+++.+.+. |+.. .++.-+..+.+ + +.+||+|+++
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 568999999999999999886 346788888 8888877665 3321 11110111111 1 3689999995
Q ss_pred hhhccccc------cCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 251 GLFTAESH------RCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 251 ~vf~h~~~------~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
--...... ......++.++.++|+|||++++....
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 21100000 012456999999999999999998754
No 233
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.50 E-value=2.4e-07 Score=91.94 Aligned_cols=99 Identities=14% Similarity=0.155 Sum_probs=67.1
Q ss_pred CCeEEEecCcchHHHHHHhcC--C-CeEEEEeecCc-hhhHHHHHhc----Cccc--cc-ccccccCCC-CC-CccceeE
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD--P-LWVMNVVSSYA-ANTLAVVYDR----GLIG--TY-HDWCEAFST-YP-RTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~--~-v~vmnv~p~d~-~~~l~~a~eR----Glig--~~-~d~~e~~~~-yp-~sFDlVh 248 (332)
..+|||+|||+|+++.+|++. + . .|+.+|. +.+++.+.++ |+.. .. .|.. .+.+ |+ ++||+|.
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~---~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~-~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKG---KIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDAR-KAPEIIGEEVADKVL 335 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCS---EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTT-CCSSSSCSSCEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCC---EEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChh-hcchhhccCCCCEEE
Confidence 568999999999999999873 2 2 4677888 7778777665 5421 11 1211 1222 66 8899999
Q ss_pred e------hhhhccccc------cCCH-------HHHHHHHHhhhcCCcEEEEEcC
Q 020011 249 L------DGLFTAESH------RCDM-------KFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 249 ~------s~vf~h~~~------~c~~-------~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+ ..++.+.++ ..++ ..+|.++.++|||||.+++++.
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 6 344544321 1122 4689999999999999998763
No 234
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.49 E-value=8e-07 Score=83.00 Aligned_cols=132 Identities=11% Similarity=-0.030 Sum_probs=90.1
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC----cccccccccccC-CCCCCccceeEehhhh
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG----LIGTYHDWCEAF-STYPRTYDLLHLDGLF 253 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG----lig~~~d~~e~~-~~yp~sFDlVh~s~vf 253 (332)
....+|||+|||+|-|+.++. .+. .+.++|. +.+++++.++. ....+ ..|+.. .+.|.+||+|.+.-++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~---~y~a~DId~~~i~~ar~~~~~~g~~~~~-~v~D~~~~~~~~~~DvvLllk~l 178 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIA---SVWGCDIHQGLGDVITPFAREKDWDFTF-ALQDVLCAPPAEAGDLALIFKLL 178 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCS---EEEEEESBHHHHHHHHHHHHHTTCEEEE-EECCTTTSCCCCBCSEEEEESCH
T ss_pred CCCCeEEEecCCccHHHHHhc-cCC---eEEEEeCCHHHHHHHHHHHHhcCCCceE-EEeecccCCCCCCcchHHHHHHH
Confidence 457899999999999999887 333 4677888 88888887762 21111 123332 3456999999999777
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-----------hHHHHHHHHHhcCcceeeecccccccccceEEEEEec
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESS-----------YFIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQKK 322 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-----------~~~~~i~~i~~~l~W~~~~~~~e~~~~~e~~li~~K~ 322 (332)
+|+.+.. ...+.++-+.|+|+|.||-.+.. .+-..++..+..--|.+...... .|-+.|.+|.
T Consensus 179 h~LE~q~--~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~~~~----nEl~~~i~~~ 252 (253)
T 3frh_A 179 PLLEREQ--AGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKTIG----TELIYLIKKN 252 (253)
T ss_dssp HHHHHHS--TTHHHHHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEEEEET----TEEEEEEEEC
T ss_pred HHhhhhc--hhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhheecC----ceEEEEEecC
Confidence 7775321 12444777899999999988722 23556677777888877665433 4677777763
No 235
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.48 E-value=2.4e-07 Score=87.59 Aligned_cols=141 Identities=13% Similarity=0.106 Sum_probs=90.7
Q ss_pred HHhhcCCCCCCCCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCC-CCCC
Q 020011 170 YKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFS-TYPR 242 (332)
Q Consensus 170 y~~~l~~l~~~~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~-~yp~ 242 (332)
|..++..+. ...+|||+|||+|-|+..+... +. ..+..+|. +.+++++.++ |+...+ ..++-.. +.+.
T Consensus 123 Y~~i~~~i~--~p~~VLDLGCG~GpLAl~~~~~~p~--a~y~a~DId~~~le~a~~~l~~~g~~~~~-~v~D~~~~~p~~ 197 (281)
T 3lcv_B 123 YRELFRHLP--RPNTLRDLACGLNPLAAPWMGLPAE--TVYIASDIDARLVGFVDEALTRLNVPHRT-NVADLLEDRLDE 197 (281)
T ss_dssp HHHHGGGSC--CCSEEEETTCTTGGGCCTTTTCCTT--CEEEEEESBHHHHHHHHHHHHHTTCCEEE-EECCTTTSCCCS
T ss_pred HHHHHhccC--CCceeeeeccCccHHHHHHHhhCCC--CEEEEEeCCHHHHHHHHHHHHhcCCCceE-EEeeecccCCCC
Confidence 333444443 3789999999999999888776 32 24677888 8888888776 333222 1222222 3449
Q ss_pred ccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh-----------hHHHHHHHHHhcCcceeeeccccccc
Q 020011 243 TYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS-----------YFIDAVATIAKGMKWSCHKEDTEYGV 311 (332)
Q Consensus 243 sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~-----------~~~~~i~~i~~~l~W~~~~~~~e~~~ 311 (332)
.||++.+.-+++|+.+.. ...+.++-..|+|||.||-.+.. .+-...+..+..--|.+.....
T Consensus 198 ~~DvaL~lkti~~Le~q~--kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~---- 271 (281)
T 3lcv_B 198 PADVTLLLKTLPCLETQQ--RGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEI---- 271 (281)
T ss_dssp CCSEEEETTCHHHHHHHS--TTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEE----
T ss_pred CcchHHHHHHHHHhhhhh--hHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeee----
Confidence 999999999999986421 12444999999999999998871 2355566666555564443322
Q ss_pred ccceEEEEEe
Q 020011 312 EKEKLLLCQK 321 (332)
Q Consensus 312 ~~e~~li~~K 321 (332)
..|-+.|.+|
T Consensus 272 ~nEl~y~i~k 281 (281)
T 3lcv_B 272 GNELIYVIQK 281 (281)
T ss_dssp TTEEEEEEC-
T ss_pred cCeeEEEecC
Confidence 2355555543
No 236
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.48 E-value=1.8e-07 Score=90.87 Aligned_cols=99 Identities=16% Similarity=0.117 Sum_probs=66.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc---ccccccccCCC-C---CCccceeEe
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG---TYHDWCEAFST-Y---PRTYDLLHL 249 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig---~~~d~~e~~~~-y---p~sFDlVh~ 249 (332)
..+|||+|||+|+|+.++++.+. -.|+++|. +.+++.+.++ |+.. .++.-+..+.+ + ..+||+|++
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~--~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGA--DEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 57899999999999999998864 24677777 7777776654 3321 11100111111 1 368999999
Q ss_pred hh---------hhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 250 DG---------LFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 250 s~---------vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+- ++++. .....++.++.++|+|||.+++....
T Consensus 296 dpP~~~~~~~~~~~~~---~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGL---RAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CCCCSCSSGGGHHHHH---HHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCCCCHHHHHHHH---HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 52 22211 23567999999999999999987643
No 237
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.47 E-value=9.3e-07 Score=81.34 Aligned_cols=134 Identities=9% Similarity=0.061 Sum_probs=90.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccccccccc-cccCCCCC-C-ccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDW-CEAFSTYP-R-TYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~-~e~~~~yp-~-sFDlVh~s~vf 253 (332)
..+|||+|||+|-++.+|+..+. .-.|+++|. +.+++.|.+. |+...+.-. +..+...+ . .||+|...++-
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 36899999999999999999864 235778888 7788777665 442211111 12233333 3 79998765543
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCcceeeecccc-cccccceEEEEEec
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHKEDTE-YGVEKEKLLLCQKK 322 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~~~~~~e-~~~~~e~~li~~K~ 322 (332)
- ..+..+|.+..+.|+++|+||++.... .+.+++.+....|.+.....- +...--.|+++.+.
T Consensus 101 g-----~lI~~IL~~~~~~l~~~~~lIlqp~~~-~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~~~ 164 (230)
T 3lec_A 101 G-----RLIADILNNDIDKLQHVKTLVLQPNNR-EDDLRKWLAANDFEIVAEDILTENDKRYEILVVKHG 164 (230)
T ss_dssp H-----HHHHHHHHHTGGGGTTCCEEEEEESSC-HHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEEEC
T ss_pred h-----HHHHHHHHHHHHHhCcCCEEEEECCCC-hHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 2 246689999999999999999998765 578888888889987765321 11112346666653
No 238
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.46 E-value=6.9e-07 Score=82.92 Aligned_cols=116 Identities=9% Similarity=0.081 Sum_probs=82.9
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccccccccc-cccCCCCC-C-ccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDW-CEAFSTYP-R-TYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~-~e~~~~yp-~-sFDlVh~s~vf 253 (332)
..+|||+|||+|-++.+|++.+. .-.|+++|. +.+++.|.++ |+...+.-. +..+..++ + .||+|....+-
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG 100 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG 100 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCc
Confidence 36899999999999999999864 235778888 7888877766 553211111 22333444 4 59998865443
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCcceeee
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~~~ 304 (332)
- ..+..+|.+..+.|+++|+||++.... ...+++.+....|.+..
T Consensus 101 g-----~lI~~IL~~~~~~L~~~~~lIlq~~~~-~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 101 G-----TLIRTILEEGAAKLAGVTKLILQPNIA-AWQLREWSEQNNWLITS 145 (244)
T ss_dssp H-----HHHHHHHHHTGGGGTTCCEEEEEESSC-HHHHHHHHHHHTEEEEE
T ss_pred h-----HHHHHHHHHHHHHhCCCCEEEEEcCCC-hHHHHHHHHHCCCEEEE
Confidence 2 235689999999999999999998654 56778888888888744
No 239
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.46 E-value=2.2e-07 Score=88.75 Aligned_cols=92 Identities=10% Similarity=-0.016 Sum_probs=63.3
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCCCccceeEehhhhccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAE 256 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp~sFDlVh~s~vf~h~ 256 (332)
..+|||+|||+|+|+.+ +..+. .|+++|. +.+++.+.+. |+...+.-.+.....+.++||+|+++--
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~~~---~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP---- 267 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKNAK---KIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLP---- 267 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTTSS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCT----
T ss_pred CCEEEEccCccCHHHHh-ccCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCc----
Confidence 46899999999999999 77433 5677888 7788777654 3321111111222223389999998621
Q ss_pred cccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 257 SHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 257 ~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
.....++.++.++|+|||.+++.+.
T Consensus 268 ---~~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 268 ---KFAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp ---TTGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ---HhHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1223789999999999999998654
No 240
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.45 E-value=2e-07 Score=93.93 Aligned_cols=102 Identities=18% Similarity=0.234 Sum_probs=66.1
Q ss_pred CCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Cccc--ccccccccCCC-CCCccceeEeh-
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLIG--TYHDWCEAFST-YPRTYDLLHLD- 250 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~~d~~e~~~~-yp~sFDlVh~s- 250 (332)
...+|||+|||+|+.+.+|++. +-. -.|+.+|. +.+++.+.++ |+.. ..+.-...+.. ++++||+|.++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~-g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNE-GAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTC-SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 3578999999999999998874 110 14677888 7788777665 4422 11110111222 34899999973
Q ss_pred -----hhhccccccC-------------CHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 -----GLFTAESHRC-------------DMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 -----~vf~h~~~~c-------------~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.++.+.++.. ....+|.++.|+|||||.|+++.
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 3444332210 02368999999999999999976
No 241
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.44 E-value=6.6e-07 Score=88.72 Aligned_cols=95 Identities=13% Similarity=0.103 Sum_probs=65.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCC-CccceeEehhhhcc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTA 255 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp-~sFDlVh~s~vf~h 255 (332)
..+|||+|||+|.|+..|++.+. .|+++|. +++++.|.++ |+. +.-.+..+..+. .+||+|.++-
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~~---~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~~~fD~Vv~dP---- 361 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRGF---NVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSVKGFDTVIVDP---- 361 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCCTTCSEEEECC----
T ss_pred CCEEEEeeccchHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCccCCCEEEEcC----
Confidence 56899999999999999998765 5678888 7888777654 332 111122223333 6899999972
Q ss_pred ccccCCHH-HHHHHHHhhhcCCcEEEEEcChhHH
Q 020011 256 ESHRCDMK-FVLLEMDRILRPNGYVIVRESSYFI 288 (332)
Q Consensus 256 ~~~~c~~~-~iL~EmdRVLRPGG~lii~d~~~~~ 288 (332)
++.... .++..+ +.|+|||.++++-++..+
T Consensus 362 --Pr~g~~~~~~~~l-~~l~p~givyvsc~p~tl 392 (425)
T 2jjq_A 362 --PRAGLHPRLVKRL-NREKPGVIVYVSCNPETF 392 (425)
T ss_dssp --CTTCSCHHHHHHH-HHHCCSEEEEEESCHHHH
T ss_pred --CccchHHHHHHHH-HhcCCCcEEEEECChHHH
Confidence 222333 355555 469999999999877653
No 242
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.42 E-value=2.5e-07 Score=91.04 Aligned_cols=99 Identities=18% Similarity=0.229 Sum_probs=65.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCC----CC-CccceeEe--
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFST----YP-RTYDLLHL-- 249 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~----yp-~sFDlVh~-- 249 (332)
..+|||+|||+|+++.+|++..-- ..|+++|. +.+++.+.++ |+...+ .+..+.. ++ ++||+|.+
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~~~~--~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATV--KQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCCCEE--EECCTTCTHHHHTTCCEEEEEEEC
T ss_pred cCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCCeEE--EeCchhhchhhcccCCCCEEEEeC
Confidence 568999999999999999875311 25677777 7777766655 442111 1112111 55 78999995
Q ss_pred ----hhhhccccc------cCCH-------HHHHHHHHhhhcCCcEEEEEc
Q 020011 250 ----DGLFTAESH------RCDM-------KFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 250 ----s~vf~h~~~------~c~~-------~~iL~EmdRVLRPGG~lii~d 283 (332)
..++.+.++ ..++ ..+|.++.++|||||.+++++
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 234444321 0111 368999999999999999987
No 243
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.41 E-value=3.3e-07 Score=88.39 Aligned_cols=110 Identities=14% Similarity=0.114 Sum_probs=69.3
Q ss_pred CCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCC-C-CccceeEehhhhcc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTY-P-RTYDLLHLDGLFTA 255 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~y-p-~sFDlVh~s~vf~h 255 (332)
..+|||+|||+|+|+.+++++ +. ++.++|. +.+++.| . .+. .+ +..+..+ + ..||+|.++--+..
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~---~i~gvDi~~~~~~~a-~-~~~-~~---~~D~~~~~~~~~fD~Ii~NPPy~~ 110 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAY---RFVGVEIDPKALDLP-P-WAE-GI---LADFLLWEPGEAFDLILGNPPYGI 110 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCS---EEEEEESCTTTCCCC-T-TEE-EE---ESCGGGCCCSSCEEEEEECCCCCC
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCC---eEEEEECCHHHHHhC-C-CCc-EE---eCChhhcCccCCCCEEEECcCccC
Confidence 348999999999999999874 23 5677777 6666555 1 111 11 1222222 3 78999999522111
Q ss_pred ----------ccc---------------cC-CHHHHHHHHHhhhcCCcEEEEEcChh-----HHHHHHHHHhcCcc
Q 020011 256 ----------ESH---------------RC-DMKFVLLEMDRILRPNGYVIVRESSY-----FIDAVATIAKGMKW 300 (332)
Q Consensus 256 ----------~~~---------------~c-~~~~iL~EmdRVLRPGG~lii~d~~~-----~~~~i~~i~~~l~W 300 (332)
+.+ .. ....++..+.++|+|||.+++..+.. ...++++.+...++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 111 VGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp BSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred cccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 100 00 11257889999999999999987764 34567776555555
No 244
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.37 E-value=8.4e-07 Score=85.87 Aligned_cols=118 Identities=8% Similarity=-0.039 Sum_probs=74.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccC--CCCC-CccceeEehhhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAF--STYP-RTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~--~~yp-~sFDlVh~s~vf 253 (332)
..+|||+|||+|+++..++..+.+. .|.++|. +.+++.|.++ |+...++-.+..+ .+++ ++||+|.|+-.+
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~-~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSG-EIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCS-CEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCC
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCC
Confidence 5689999999999999998876532 4688888 8888887765 4411111111111 2455 899999997554
Q ss_pred cccc-ccCC----HHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCcceeee
Q 020011 254 TAES-HRCD----MKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 254 ~h~~-~~c~----~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~~~ 304 (332)
..-. .... ...++.++.|+| +|+.+++....+. +++.+..+.|+...
T Consensus 297 g~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~~~~~~---~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 297 GLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFITTEKKA---IEEAIAENGFEIIH 348 (373)
T ss_dssp C------CCHHHHHHHHHHHHHHHE-EEEEEEEESCHHH---HHHHHHHTTEEEEE
T ss_pred CcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEECCHHH---HHHHHHHcCCEEEE
Confidence 4211 1111 256899999999 5555556555543 34456666777644
No 245
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.36 E-value=1.5e-07 Score=98.86 Aligned_cols=99 Identities=16% Similarity=0.252 Sum_probs=68.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccccccccc-cc---cCCCCC-CccceeEehh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDW-CE---AFSTYP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~-~e---~~~~yp-~sFDlVh~s~ 251 (332)
..+|||+|||+|+|+.+++..+.. .|+.+|. +.+++.+.+. |+.+.-+.+ +. .+++.. ++||+|.++-
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~--~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGAR--STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCcEEEeeechhHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 468999999999999999887752 4678888 8888877765 432111111 11 122334 8999999853
Q ss_pred -----------hhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 252 -----------LFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 252 -----------vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
++++. .+...++.++.|+|||||+|+++...
T Consensus 618 P~f~~~~~~~~~~~~~---~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQ---RDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHH---HHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHH---HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 22221 23457899999999999999998866
No 246
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.35 E-value=1.7e-07 Score=94.30 Aligned_cols=101 Identities=15% Similarity=0.234 Sum_probs=65.3
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc----Ccc-cccccccccCCC-CCCccceeEe----
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR----GLI-GTYHDWCEAFST-YPRTYDLLHL---- 249 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR----Gli-g~~~d~~e~~~~-yp~sFDlVh~---- 249 (332)
..+|||+|||+|+.+.+|++. +--. .|+.+|. +.+++.+.++ |+. -..+.-...+.. ++++||+|.+
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g-~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~Pc 180 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKG-LLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPC 180 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCS-EEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCC
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCc
Confidence 568999999999999998864 1101 4677888 7788777665 442 111110111222 3589999995
Q ss_pred --hhhhcccccc------CC-------HHHHHHHHHhhhcCCcEEEEEc
Q 020011 250 --DGLFTAESHR------CD-------MKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 250 --s~vf~h~~~~------c~-------~~~iL~EmdRVLRPGG~lii~d 283 (332)
..++.+-++. .+ ...+|.++.|+|||||.|+++.
T Consensus 181 Sg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 181 SGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp CCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 2344332211 11 1569999999999999999976
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.30 E-value=8.2e-07 Score=83.55 Aligned_cols=91 Identities=12% Similarity=0.083 Sum_probs=59.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----CcccccccccccCCCCC-CccceeEehhhhcc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFSTYP-RTYDLLHLDGLFTA 255 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~yp-~sFDlVh~s~vf~h 255 (332)
..+|||+|||+|.++..|++++. .|+++|. +.+++.+.++ |+. .+.-.+..+..++ .+||+|.++-.++
T Consensus 43 ~~~VLDiG~G~G~lt~~La~~~~---~v~~vDi~~~~~~~a~~~~~~~~~~-~v~~~~~D~~~~~~~~~D~Vv~n~py~- 117 (299)
T 2h1r_A 43 SDIVLEIGCGTGNLTVKLLPLAK---KVITIDIDSRMISEVKKRCLYEGYN-NLEVYEGDAIKTVFPKFDVCTANIPYK- 117 (299)
T ss_dssp TCEEEEECCTTSTTHHHHTTTSS---EEEEECSCHHHHHHHHHHHHHTTCC-CEEC----CCSSCCCCCSEEEEECCGG-
T ss_pred cCEEEEEcCcCcHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECchhhCCcccCCEEEEcCCcc-
Confidence 56899999999999999999865 5788888 8888887765 331 1111223344566 7999999964332
Q ss_pred ccccCCHHHHH---------------HHHHhhhcCCcE
Q 020011 256 ESHRCDMKFVL---------------LEMDRILRPNGY 278 (332)
Q Consensus 256 ~~~~c~~~~iL---------------~EmdRVLRPGG~ 278 (332)
+.. ..+..++ .+..|+++|+|.
T Consensus 118 ~~~-~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~ 154 (299)
T 2h1r_A 118 ISS-PLIFKLISHRPLFKCAVLMFQKEFAERMLANVGD 154 (299)
T ss_dssp GHH-HHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTS
T ss_pred ccc-HHHHHHHhcCCccceeeehHHHHHHHHHhcCCCC
Confidence 211 1122333 447899999884
No 248
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.28 E-value=2e-06 Score=84.84 Aligned_cols=111 Identities=17% Similarity=0.199 Sum_probs=72.5
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Ccc--ccc-ccccccCC--CCC-CccceeEeh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLI--GTY-HDWCEAFS--TYP-RTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Gli--g~~-~d~~e~~~--~yp-~sFDlVh~s 250 (332)
..+|||+|||+|.|+..|++.+. .|+++|. +++++.|.++ |+. -.+ .|..+.+. +++ ++||+|.++
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~~~---~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQAA---SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCEEEECCCCCCHHHHHHHhhCC---EEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 46899999999999999999854 5678888 8888877654 331 111 22222221 245 789999987
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCccee
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSC 302 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~ 302 (332)
+++.....++..+.+ ++|++.++++-.+..+.+-..++....+.+
T Consensus 364 ------PPr~g~~~~~~~l~~-~~p~~ivyvsc~p~tlard~~~l~~~Gy~~ 408 (433)
T 1uwv_A 364 ------PARAGAAGVMQQIIK-LEPIRIVYVSCNPATLARDSEALLKAGYTI 408 (433)
T ss_dssp ------CCTTCCHHHHHHHHH-HCCSEEEEEESCHHHHHHHHHHHHHTTCEE
T ss_pred ------CCCccHHHHHHHHHh-cCCCeEEEEECChHHHHhhHHHHHHCCcEE
Confidence 333333455555544 899999999988876544333333334544
No 249
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.24 E-value=2.8e-06 Score=83.91 Aligned_cols=141 Identities=15% Similarity=0.091 Sum_probs=83.8
Q ss_pred CCeEEEecCcchHHHHHHhcCC------------CeEEEEeecCc-hhhHHHHHhc----Cccc-ccccccccCCCCC--
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDP------------LWVMNVVSSYA-ANTLAVVYDR----GLIG-TYHDWCEAFSTYP-- 241 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~------------v~vmnv~p~d~-~~~l~~a~eR----Glig-~~~d~~e~~~~yp-- 241 (332)
..+|||.|||+|+|+..+.+.- .-..++.++|. +.++..|..+ |+.. ..+-.+...+..+
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~ 251 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPS 251 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCS
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCccc
Confidence 4689999999999987776420 00114677777 7777777543 4321 1111122223233
Q ss_pred CccceeEehhhhccccccCC--------------HHHHHHHHHhhhcCCcEEEEEcChhHH------HHHHH-HHhcCcc
Q 020011 242 RTYDLLHLDGLFTAESHRCD--------------MKFVLLEMDRILRPNGYVIVRESSYFI------DAVAT-IAKGMKW 300 (332)
Q Consensus 242 ~sFDlVh~s~vf~h~~~~c~--------------~~~iL~EmdRVLRPGG~lii~d~~~~~------~~i~~-i~~~l~W 300 (332)
..||+|.++--|.+...... -..++..+.++|||||.+++..+..++ .++++ +.+....
T Consensus 252 ~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~~l 331 (445)
T 2okc_A 252 TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQDFNL 331 (445)
T ss_dssp SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHEEE
T ss_pred CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHHHhcCcE
Confidence 68999999977765432110 136899999999999999988776532 34554 4555445
Q ss_pred eeeecccc---cc-cccceEEEEEec
Q 020011 301 SCHKEDTE---YG-VEKEKLLLCQKK 322 (332)
Q Consensus 301 ~~~~~~~e---~~-~~~e~~li~~K~ 322 (332)
+..+.-.. .+ ..+--|+|.+|.
T Consensus 332 ~~ii~lp~~~F~~t~v~t~Il~~~k~ 357 (445)
T 2okc_A 332 HTILRLPTGIFYAQGVKANVLFFSKG 357 (445)
T ss_dssp EEEEECCSSSSSSTTCCEEEEEEEES
T ss_pred EEEEeCCCCCccCCCCCEEEEEEECC
Confidence 44432111 11 134457777664
No 250
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.23 E-value=8.6e-07 Score=88.94 Aligned_cols=118 Identities=12% Similarity=0.196 Sum_probs=70.8
Q ss_pred CCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhc----Cccc--ccccccccCCC-CCCccceeEeh-
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDR----GLIG--TYHDWCEAFST-YPRTYDLLHLD- 250 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~~d~~e~~~~-yp~sFDlVh~s- 250 (332)
..+|||+|||+|+.+.+|++. +. -.|+.+|. +.+++.+.++ |+.. ..+.-...+.. ++++||+|.++
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~--g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGK--GLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTC--SEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECC
Confidence 568999999999999888764 21 13567777 7777766654 4421 11110111222 35899999974
Q ss_pred -----hhhccccc------cCC-------HHHHHHHHHhhhcCCcEEEEEcC----hhHHHHHHHHHhcCcce
Q 020011 251 -----GLFTAESH------RCD-------MKFVLLEMDRILRPNGYVIVRES----SYFIDAVATIAKGMKWS 301 (332)
Q Consensus 251 -----~vf~h~~~------~c~-------~~~iL~EmdRVLRPGG~lii~d~----~~~~~~i~~i~~~l~W~ 301 (332)
.++.+-++ ..+ ...+|.++.|+|||||.|+++.. .+.-+-|+.+++...++
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~~ 256 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPVT 256 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCCE
Confidence 23322110 000 12689999999999999998763 22234455555544333
No 251
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.20 E-value=3.5e-07 Score=89.65 Aligned_cols=45 Identities=20% Similarity=0.180 Sum_probs=36.7
Q ss_pred CCC-CccceeEehhhhccccccC-----------------------------------CHHHHHHHHHhhhcCCcEEEEE
Q 020011 239 TYP-RTYDLLHLDGLFTAESHRC-----------------------------------DMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 239 ~yp-~sFDlVh~s~vf~h~~~~c-----------------------------------~~~~iL~EmdRVLRPGG~lii~ 282 (332)
.|| +|||+||++.+||.+.+.. +...+|....|.|||||.+++.
T Consensus 145 lfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~ 224 (374)
T 3b5i_A 145 LFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLV 224 (374)
T ss_dssp CSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 378 9999999999999875322 3345799999999999999986
Q ss_pred c
Q 020011 283 E 283 (332)
Q Consensus 283 d 283 (332)
-
T Consensus 225 ~ 225 (374)
T 3b5i_A 225 C 225 (374)
T ss_dssp E
T ss_pred E
Confidence 4
No 252
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.11 E-value=4.7e-08 Score=88.70 Aligned_cols=97 Identities=10% Similarity=0.029 Sum_probs=60.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-ccccccccccCC--CCC--CccceeEeh-----
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-IGTYHDWCEAFS--TYP--RTYDLLHLD----- 250 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-ig~~~d~~e~~~--~yp--~sFDlVh~s----- 250 (332)
..+|||+|||+|.++..|++++. .|+++|. +++++.+.++-- ...+.-.+..+. +++ ++| .|.++
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~~---~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~ 105 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKISK---QVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHL 105 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHSS---EEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSS
T ss_pred CCEEEEEeCCCCHHHHHHHHhCC---eEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCccc
Confidence 56899999999999999998864 6788888 777777655421 011111112222 344 578 56654
Q ss_pred ------hhhccccccCCHHHHH----HHHHhhhcCCcEEEEEcCh
Q 020011 251 ------GLFTAESHRCDMKFVL----LEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 251 ------~vf~h~~~~c~~~~iL----~EmdRVLRPGG~lii~d~~ 285 (332)
+++.|.. ....++ .++.|+|+|||.+.+....
T Consensus 106 ~~~~~~~~~~~~~---~~~~~lm~q~e~a~rll~~~G~l~v~~~~ 147 (245)
T 1yub_A 106 STQIIKKVVFESR---ASDIYLIVEEGFYKRTLDIHRTLGLLLHT 147 (245)
T ss_dssp CHHHHHHHHHHCC---CEEEEEEEESSHHHHHHCGGGSHHHHTTT
T ss_pred cHHHHHHHHhCCC---CCeEEEEeeHHHHHHHhCCCCchhhhhee
Confidence 1222311 112344 6699999999988776543
No 253
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.11 E-value=1.2e-06 Score=79.93 Aligned_cols=42 Identities=10% Similarity=0.130 Sum_probs=35.7
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR 224 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR 224 (332)
....+|||+|||+|.++..|++++. .|+++|. +++++.+.++
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~~---~v~~vD~~~~~~~~a~~~ 71 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRCN---FVTAIEIDHKLCKTTENK 71 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHH
T ss_pred CCCCEEEEEeCCchHHHHHHHHcCC---eEEEEECCHHHHHHHHHh
Confidence 3467899999999999999999874 5788888 8899888876
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.06 E-value=2.9e-06 Score=83.06 Aligned_cols=105 Identities=12% Similarity=0.084 Sum_probs=64.4
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcC--ccc-c--------cccc-ccc--CC-CC--C
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRG--LIG-T--------YHDW-CEA--FS-TY--P 241 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRG--lig-~--------~~d~-~e~--~~-~y--p 241 (332)
...++|||+|||.|+++..+++.+. ..|+.+|. +..++.|.+.- +.+ . +.-. ..+ ++ .+ +
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 3578999999999999999998875 25666777 78888887651 100 0 1000 111 11 12 3
Q ss_pred -CccceeEehhhh---ccccccCCHHHHHHHH----HhhhcCCcEEEEEcChh
Q 020011 242 -RTYDLLHLDGLF---TAESHRCDMKFVLLEM----DRILRPNGYVIVRESSY 286 (332)
Q Consensus 242 -~sFDlVh~s~vf---~h~~~~c~~~~iL~Em----dRVLRPGG~lii~d~~~ 286 (332)
++||+|++...- ...+..---..++.++ .|+|+|||.+++.....
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 789999987321 1001000113455555 99999999999976543
No 255
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.99 E-value=6.9e-06 Score=77.63 Aligned_cols=134 Identities=14% Similarity=0.034 Sum_probs=71.4
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHH---hcCc-ccccccccccCCCCC-CccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVY---DRGL-IGTYHDWCEAFSTYP-RTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~---eRGl-ig~~~d~~e~~~~yp-~sFDlVh~s~vf~ 254 (332)
..+|||+|||+|+|+.+.+++ ++ -.+.+++. .+...... ..|. +..+..-+ ....++ ..||+|.|+...+
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~--~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~-dv~~l~~~~~DlVlsD~apn 151 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEV--SGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKT-DIHRLEPVKCDTLLCDIGES 151 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTE--EEEEEECCCCTTCCCCCCCCBTTGGGEEEECSC-CTTTSCCCCCSEEEECCCCC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCC--CcceeEEEeccCcccccccCcCCCCeEEEeccc-eehhcCCCCccEEEecCccC
Confidence 457999999999999987765 43 23333333 11100000 0011 01111111 123466 8999999986555
Q ss_pred cccc----cCCHHHHHHHHHhhhcCC-cEEEEEcCh-------hHHHHHHHHHhcCcceeeecccccccccceEEEEEec
Q 020011 255 AESH----RCDMKFVLLEMDRILRPN-GYVIVRESS-------YFIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQKK 322 (332)
Q Consensus 255 h~~~----~c~~~~iL~EmdRVLRPG-G~lii~d~~-------~~~~~i~~i~~~l~W~~~~~~~e~~~~~e~~li~~K~ 322 (332)
-.. ......+|..+.++|||| |.|++..-. +.+..++...++.+...- -+-+ ...|-.+||+..
T Consensus 152 -sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V~~~KP--aSR~-~S~E~Y~V~~~r 227 (277)
T 3evf_A 152 -SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRNP--LSRN-STHEMYYVSGAR 227 (277)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCT--TSCT-TCCCEEEESSCC
T ss_pred -cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCCEEEEeC--CCCC-CCCceEEEEecC
Confidence 211 011123678889999999 999996644 234444444444332211 1111 146778887653
No 256
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.95 E-value=7.7e-06 Score=79.81 Aligned_cols=97 Identities=14% Similarity=0.189 Sum_probs=62.1
Q ss_pred CCeEEEecCcchHHHHHHhcC---------------CCeEEEEeecCc-hhhHHHHHhc--------------Ccccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD---------------PLWVMNVVSSYA-ANTLAVVYDR--------------GLIGTYH 231 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~---------------~v~vmnv~p~d~-~~~l~~a~eR--------------Glig~~~ 231 (332)
.-+|+|+||++|..+..+.+. ..-.+.|.-.|. .|.-..++.+ |++|.++
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 456999999999765444332 122345555665 5555545433 1122222
Q ss_pred cccccCCCCC-CccceeEehhhhccccccC------------------------------CHHHHHHHHHhhhcCCcEEE
Q 020011 232 DWCEAFSTYP-RTYDLLHLDGLFTAESHRC------------------------------DMKFVLLEMDRILRPNGYVI 280 (332)
Q Consensus 232 d~~e~~~~yp-~sFDlVh~s~vf~h~~~~c------------------------------~~~~iL~EmdRVLRPGG~li 280 (332)
. ..|| +|||+||++..||-+.+.. +...+|.-..|.|+|||.++
T Consensus 132 ~-----rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mv 206 (359)
T 1m6e_X 132 G-----RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMV 206 (359)
T ss_dssp S-----CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEE
T ss_pred h-----ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence 1 2488 9999999999998654311 12235888899999999999
Q ss_pred EEc
Q 020011 281 VRE 283 (332)
Q Consensus 281 i~d 283 (332)
+.-
T Consensus 207 l~~ 209 (359)
T 1m6e_X 207 LTI 209 (359)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 257
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.88 E-value=2.1e-05 Score=77.40 Aligned_cols=45 Identities=16% Similarity=0.095 Sum_probs=33.2
Q ss_pred CCC-CccceeEehhhhccccccC-CHH-----------------------------------HHHHHHHhhhcCCcEEEE
Q 020011 239 TYP-RTYDLLHLDGLFTAESHRC-DMK-----------------------------------FVLLEMDRILRPNGYVIV 281 (332)
Q Consensus 239 ~yp-~sFDlVh~s~vf~h~~~~c-~~~-----------------------------------~iL~EmdRVLRPGG~lii 281 (332)
.|| +|||+||++.+||-+.+.. .+. .+|.-..|.|+|||.+++
T Consensus 144 lfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl 223 (384)
T 2efj_A 144 LFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLL 223 (384)
T ss_dssp CSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEE
Confidence 478 9999999999998765321 221 125556899999999999
Q ss_pred Ec
Q 020011 282 RE 283 (332)
Q Consensus 282 ~d 283 (332)
.-
T Consensus 224 ~~ 225 (384)
T 2efj_A 224 TF 225 (384)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 258
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.77 E-value=1.2e-05 Score=78.56 Aligned_cols=92 Identities=16% Similarity=0.070 Sum_probs=61.4
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhc-------------------Ccc--cccc-cccccC
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDR-------------------GLI--GTYH-DWCEAF 237 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eR-------------------Gli--g~~~-d~~e~~ 237 (332)
..+|||+|||+|.++..++.+ +. ..|+.+|. +++++.+.+. |+. -.++ |..+.+
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~--~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPA--EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSC--SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 468999999999999888875 32 14677777 7777666543 331 1111 111111
Q ss_pred CCCCCccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEE
Q 020011 238 STYPRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 238 ~~yp~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~ 282 (332)
...++.||+|++.- .+....++....|.|||||.++++
T Consensus 126 ~~~~~~fD~I~lDP-------~~~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 126 AERHRYFHFIDLDP-------FGSPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HHSTTCEEEEEECC-------SSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred HhccCCCCEEEeCC-------CCCHHHHHHHHHHhcCCCCEEEEE
Confidence 11246899999762 244568999999999999999886
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.75 E-value=1.6e-05 Score=77.59 Aligned_cols=109 Identities=8% Similarity=-0.019 Sum_probs=67.7
Q ss_pred CCCCeEEEecCcchHHHHHHhcCCC-------------------------------------eEEEEeecCc-hhhHHHH
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDDPL-------------------------------------WVMNVVSSYA-ANTLAVV 221 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~~v-------------------------------------~vmnv~p~d~-~~~l~~a 221 (332)
.....|||.+||+|+|+..++..+. ....|.++|. +.+++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 3457899999999998866543210 0024788888 8888888
Q ss_pred Hhc----CcccccccccccCCC--CCCccceeEehhhhc-cccccCCHHHHHHHHHhhhcC--CcEEEEEcChhHH
Q 020011 222 YDR----GLIGTYHDWCEAFST--YPRTYDLLHLDGLFT-AESHRCDMKFVLLEMDRILRP--NGYVIVRESSYFI 288 (332)
Q Consensus 222 ~eR----Glig~~~d~~e~~~~--yp~sFDlVh~s~vf~-h~~~~c~~~~iL~EmdRVLRP--GG~lii~d~~~~~ 288 (332)
.+. |+...++-.+..+.. .+.+||+|.|+-=+. .+.+..++..+..+|.++||+ ||.+++......+
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~l 349 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYEDF 349 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCTTH
T ss_pred HHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCHHH
Confidence 765 442212111122222 348999999974332 222223456788889999987 8877766655433
No 260
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.64 E-value=3e-05 Score=74.74 Aligned_cols=91 Identities=11% Similarity=0.145 Sum_probs=58.2
Q ss_pred CeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc----Cccc--ccccccccCC-CCC-------------
Q 020011 183 RNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR----GLIG--TYHDWCEAFS-TYP------------- 241 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~~d~~e~~~-~yp------------- 241 (332)
.+|||+|||+|+|+..|+.... .|+++|. +.+++.|.+. |+.. .++.-.+.+. .++
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~~---~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNFD---RVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGSS---EEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CEEEEccCCCCHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 5799999999999999988544 5678888 7788777654 4311 1110011111 112
Q ss_pred --CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 242 --RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 242 --~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
.+||+|.++ +++. .+..++.+.|+|+|.+++....
T Consensus 292 ~~~~fD~Vv~d------PPr~---g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 292 KSYQCETIFVD------PPRS---GLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp GGCCEEEEEEC------CCTT---CCCHHHHHHHTTSSEEEEEESC
T ss_pred ccCCCCEEEEC------cCcc---ccHHHHHHHHhCCCEEEEEECC
Confidence 279999876 3222 3456777888888888876643
No 261
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.62 E-value=4.1e-05 Score=75.05 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=64.5
Q ss_pred CCCeEEEecCcchHHHHHHhc--CCC-----------------------------------eEEEEeecCc-hhhHHHHH
Q 020011 181 KIRNVMDMNTLYGGFAAAVID--DPL-----------------------------------WVMNVVSSYA-ANTLAVVY 222 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~--~~v-----------------------------------~vmnv~p~d~-~~~l~~a~ 222 (332)
....|||.+||+|+|+...+. .+. ....|.++|. +.+++.|.
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 357899999999999744433 220 0024788888 88888877
Q ss_pred hc----CcccccccccccCC--CCCCccceeEehhhhc-cccccCCHHHHHHHHHhhhcC--CcEEEEEcChhHH
Q 020011 223 DR----GLIGTYHDWCEAFS--TYPRTYDLLHLDGLFT-AESHRCDMKFVLLEMDRILRP--NGYVIVRESSYFI 288 (332)
Q Consensus 223 eR----Glig~~~d~~e~~~--~yp~sFDlVh~s~vf~-h~~~~c~~~~iL~EmdRVLRP--GG~lii~d~~~~~ 288 (332)
+. |+...++-.+..+. +.+.+||+|.|+-=+. .+.+..++..+..+|.++||+ ||.+++......+
T Consensus 281 ~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~l 355 (393)
T 3k0b_A 281 QNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYELF 355 (393)
T ss_dssp HHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECCTTH
T ss_pred HHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECCHHH
Confidence 65 44221111111222 2348999999983221 111112345678888888887 8877766655433
No 262
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.61 E-value=5.3e-05 Score=74.58 Aligned_cols=93 Identities=11% Similarity=0.074 Sum_probs=63.3
Q ss_pred CCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhc----Ccccc-cccccc---cCC--CCCCccceeE
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDR----GLIGT-YHDWCE---AFS--TYPRTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eR----Glig~-~~d~~e---~~~--~yp~sFDlVh 248 (332)
..+|||++||+|+|+..++.+ +. -.|+.+|. +.+++.+.+. |+... +.-.+. .+. .+++.||+|.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga--~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCV--EKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCE--EEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCEEEECCCcccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 468999999999999888773 42 25677888 7777666544 43221 111111 122 2357899999
Q ss_pred ehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 249 LDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 249 ~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
++- .+....++....+.|+|||+|+++-
T Consensus 131 lDP-------~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP-------FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC-------SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC-------CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 983 1334578999999999999998865
No 263
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.54 E-value=9.1e-05 Score=72.49 Aligned_cols=107 Identities=8% Similarity=0.009 Sum_probs=65.5
Q ss_pred CCCeEEEecCcchHHHHHHhc--CCC-----------------------------------eEEEEeecCc-hhhHHHHH
Q 020011 181 KIRNVMDMNTLYGGFAAAVID--DPL-----------------------------------WVMNVVSSYA-ANTLAVVY 222 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~--~~v-----------------------------------~vmnv~p~d~-~~~l~~a~ 222 (332)
....|||.+||+|+|+...+. .+. .-..|.++|. +.+++.|.
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 357899999999998754432 220 0024788888 88888877
Q ss_pred hc----CcccccccccccCC--CCCCccceeEehhhhc-cccccCCHHHHHHHHHhhhcC--CcEEEEEcChhH
Q 020011 223 DR----GLIGTYHDWCEAFS--TYPRTYDLLHLDGLFT-AESHRCDMKFVLLEMDRILRP--NGYVIVRESSYF 287 (332)
Q Consensus 223 eR----Glig~~~d~~e~~~--~yp~sFDlVh~s~vf~-h~~~~c~~~~iL~EmdRVLRP--GG~lii~d~~~~ 287 (332)
+. |+...++-.+..+. +.+.+||+|.|+==+. .+.+..++..+..+|.++||+ ||.+++..+...
T Consensus 274 ~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~ 347 (384)
T 3ldg_A 274 KNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDTD 347 (384)
T ss_dssp HHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCTT
T ss_pred HHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCHH
Confidence 65 44321111111222 2347999999983221 122223456788888999987 887777666543
No 264
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.52 E-value=3.6e-05 Score=71.20 Aligned_cols=72 Identities=13% Similarity=0.038 Sum_probs=46.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-h-------hhHHHHHhc----Cc---ccccccccccCC-CCC---C
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-A-------NTLAVVYDR----GL---IGTYHDWCEAFS-TYP---R 242 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~-------~~l~~a~eR----Gl---ig~~~d~~e~~~-~yp---~ 242 (332)
..+|||+|||+|.++..|+..+. .|+++|. + ++++.+.++ |+ +-.++.-.+.++ .++ +
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~---~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGL---TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTC---CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred cCeEEEeeCccCHHHHHHHHhCC---EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 46899999999999999998865 4567777 6 777777543 22 112211111222 244 6
Q ss_pred ccceeEehhhhccc
Q 020011 243 TYDLLHLDGLFTAE 256 (332)
Q Consensus 243 sFDlVh~s~vf~h~ 256 (332)
+||+|.++-.|.|.
T Consensus 161 ~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 161 KPDIVYLDPMYPER 174 (258)
T ss_dssp CCSEEEECCCC---
T ss_pred CccEEEECCCCCCc
Confidence 89999998777663
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.51 E-value=0.0002 Score=72.96 Aligned_cols=141 Identities=11% Similarity=0.018 Sum_probs=81.2
Q ss_pred CCeEEEecCcchHHHHHHhcC----CC-------------eEEEEeecCc-hhhHHHHHhc----Ccccc----cccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD----PL-------------WVMNVVSSYA-ANTLAVVYDR----GLIGT----YHDWCE 235 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~----~v-------------~vmnv~p~d~-~~~l~~a~eR----Glig~----~~d~~e 235 (332)
..+|||.+||+|+|...+.+. .. ...++.++|. +.++.+|... |+... .+-.+.
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 468999999999998766542 10 0114678888 7788777653 33210 111122
Q ss_pred -cCC--CCC-CccceeEehhhhcccccc----------CC-HHHHHHHHHhhhcCCcEEEEEcChhHH------HHHHHH
Q 020011 236 -AFS--TYP-RTYDLLHLDGLFTAESHR----------CD-MKFVLLEMDRILRPNGYVIVRESSYFI------DAVATI 294 (332)
Q Consensus 236 -~~~--~yp-~sFDlVh~s~vf~h~~~~----------c~-~~~iL~EmdRVLRPGG~lii~d~~~~~------~~i~~i 294 (332)
.+. .++ ..||+|.++--|...... .+ -..++..+.+.|||||.+++.-+..++ .+|++.
T Consensus 250 DtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~ 329 (541)
T 2ar0_A 250 NTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRD 329 (541)
T ss_dssp CTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHH
T ss_pred CCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHHHHHH
Confidence 222 134 789999998555432210 11 125889999999999999988877643 345443
Q ss_pred -HhcCcceeeecccc---cc-cccceEEEEEec
Q 020011 295 -AKGMKWSCHKEDTE---YG-VEKEKLLLCQKK 322 (332)
Q Consensus 295 -~~~l~W~~~~~~~e---~~-~~~e~~li~~K~ 322 (332)
.+...-...+.-.. .+ ..+--|+|.+|.
T Consensus 330 L~~~~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k~ 362 (541)
T 2ar0_A 330 LMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKG 362 (541)
T ss_dssp HHHHEEEEEEEECCSSCSSSCSCCEEEEEEEEB
T ss_pred HhhcCCEEEEEEcCcCcccCCCCcEEEEEEECC
Confidence 33322222222111 11 234567888774
No 266
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.47 E-value=5.6e-05 Score=71.56 Aligned_cols=134 Identities=11% Similarity=-0.035 Sum_probs=71.8
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHh---cCc-ccccccccccCCCCC-CccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYD---RGL-IGTYHDWCEAFSTYP-RTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~e---RGl-ig~~~d~~e~~~~yp-~sFDlVh~s~vf~ 254 (332)
..+|||+|||+|+|+.+.+++ ++ ..+.+++. .++...+.. .|. +..+.+-++ +..++ ..||+|.|+...+
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv--~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~d-v~~l~~~~~DvVLSDmApn 167 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNV--KKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTD-VFNMEVIPGDTLLCDIGES 167 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTE--EEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCC-GGGSCCCCCSEEEECCCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCC--CeeeeEEeccCccccccccccCCCceEEeeCCcc-hhhcCCCCcCEEEecCccC
Confidence 458999999999999987754 43 34556655 321100100 010 011111111 22456 8999999997765
Q ss_pred ccccc----CCHHHHHHHHHhhhcCC--cEEEEEcCh-------hHHHHHHHHHhcCcceeeecccccccccceEEEEEe
Q 020011 255 AESHR----CDMKFVLLEMDRILRPN--GYVIVRESS-------YFIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQK 321 (332)
Q Consensus 255 h~~~~----c~~~~iL~EmdRVLRPG--G~lii~d~~-------~~~~~i~~i~~~l~W~~~~~~~e~~~~~e~~li~~K 321 (332)
-... .....+|.=+.++|||| |.|++..-. +.+..++...++.+...- -+-+ ...|-.+||+.
T Consensus 168 -sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F~~V~~~KP--aSR~-~S~E~Y~V~~~ 243 (282)
T 3gcz_A 168 -SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKHGGGLVRVP--LSRN-STHEMYWVSGT 243 (282)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCT--TSCT-TCCCEEEETTC
T ss_pred -CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhcCCEEEEcC--CCcc-cCcceeEEEec
Confidence 2211 01113455557899999 999986644 234444444444333211 1111 14677787754
Q ss_pred c
Q 020011 322 K 322 (332)
Q Consensus 322 ~ 322 (332)
.
T Consensus 244 r 244 (282)
T 3gcz_A 244 R 244 (282)
T ss_dssp C
T ss_pred C
Confidence 3
No 267
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.41 E-value=0.0003 Score=73.40 Aligned_cols=128 Identities=13% Similarity=0.096 Sum_probs=71.1
Q ss_pred ccccccccchhhHHH---HHHHHH-hhcCCC-CCCCCCeEEEecCcchHH---HHHHhcC-CC--eEEEEeecCc-hhhH
Q 020011 151 GSASAFKHDDSKWNV---RVKHYK-KLLPAL-GTDKIRNVMDMNTLYGGF---AAAVIDD-PL--WVMNVVSSYA-ANTL 218 (332)
Q Consensus 151 ~~~~~F~~d~~~W~~---~v~~y~-~~l~~l-~~~~~r~VLD~GCG~Ggf---aa~L~~~-~v--~vmnv~p~d~-~~~l 218 (332)
.+.+.|+.|.-++.. .+.... ..++.- ...+...|||+|||+|-+ +..-.++ +. .|..|..... .-++
T Consensus 322 ~tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~ 401 (637)
T 4gqb_A 322 QTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTL 401 (637)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHH
T ss_pred hhhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH
Confidence 467889888755543 333222 122211 122345699999999976 2222222 22 2333332222 3445
Q ss_pred HHHHhcCc---ccccccccccCCCCCCccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEE
Q 020011 219 AVVYDRGL---IGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVI 280 (332)
Q Consensus 219 ~~a~eRGl---ig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~li 280 (332)
+...+.|+ |-.++.-.+.. .-|...|+|++- .+.+.-..+.+..+|.-.+|.|||||.+|
T Consensus 402 ~~v~~N~~~dkVtVI~gd~eev-~LPEKVDIIVSE-wMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 402 ENWQFEEWGSQVTVVSSDMREW-VAPEKADIIVSE-LLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp HHHHHHTTGGGEEEEESCTTTC-CCSSCEEEEECC-CCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHhccCCCeEEEEeCcceec-cCCcccCEEEEE-cCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 55555665 22333222221 356889999874 33333223567788999999999999865
No 268
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.41 E-value=0.00013 Score=69.70 Aligned_cols=133 Identities=17% Similarity=0.064 Sum_probs=72.2
Q ss_pred CCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHH--HH-HhcCc-ccccccccccCCCCC-CccceeEehhhh
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLA--VV-YDRGL-IGTYHDWCEAFSTYP-RTYDLLHLDGLF 253 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~--~a-~eRGl-ig~~~d~~e~~~~yp-~sFDlVh~s~vf 253 (332)
...+|||+||++|||+..++++ ++ ..|.++|. .++.. .. ...+. +.....-++ +..++ ..||+|.|+...
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv--~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~d-i~~l~~~~~DlVlsD~AP 157 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEV--MSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSN-VFTMPTEPSDTLLCDIGE 157 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTE--EEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCC-TTTSCCCCCSEEEECCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCC--ceeeeEEeccccccccccccccCCceEEeecCce-eeecCCCCcCEEeecCcC
Confidence 3688999999999999999986 43 34555555 22100 00 00010 011111111 22345 899999998655
Q ss_pred cccccc----CCHHHHHHHHHhhhcCC-cEEEEEcCh-------hHHHHHHHHHhcCcceeeeccccccc-ccceEEEEE
Q 020011 254 TAESHR----CDMKFVLLEMDRILRPN-GYVIVRESS-------YFIDAVATIAKGMKWSCHKEDTEYGV-EKEKLLLCQ 320 (332)
Q Consensus 254 ~h~~~~----c~~~~iL~EmdRVLRPG-G~lii~d~~-------~~~~~i~~i~~~l~W~~~~~~~e~~~-~~e~~li~~ 320 (332)
+ -... .....+|.=+.++|+|| |.|++..-. +.+..++....+.+. ...-+-+ ..|.++||.
T Consensus 158 n-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~~V~~----~KPaSR~~S~E~Y~V~~ 232 (300)
T 3eld_A 158 S-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIV----RVPFSRNSTHEMYYISG 232 (300)
T ss_dssp C-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHCCEEE----CCTTSCTTCCCEEEESS
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCCcEEE----EeCCCCCCChHHeeecc
Confidence 4 2110 00113444457899999 999997644 344455555444333 2111111 467888876
Q ss_pred e
Q 020011 321 K 321 (332)
Q Consensus 321 K 321 (332)
.
T Consensus 233 ~ 233 (300)
T 3eld_A 233 A 233 (300)
T ss_dssp C
T ss_pred C
Confidence 5
No 269
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.27 E-value=0.0014 Score=70.28 Aligned_cols=139 Identities=8% Similarity=0.001 Sum_probs=81.3
Q ss_pred CCeEEEecCcchHHHHHHhcCC--CeEEEEeecCc-hhhHHHHHhc----------Cccc-ccccccccCC---CCC-Cc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDP--LWVMNVVSSYA-ANTLAVVYDR----------GLIG-TYHDWCEAFS---TYP-RT 243 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~--v~vmnv~p~d~-~~~l~~a~eR----------Glig-~~~d~~e~~~---~yp-~s 243 (332)
..+|||.|||+|+|+.+++++- .-..++.++|. +.++..|..| |+.. .++ +..+. ..+ ..
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~--~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTIT--GEDVCSLNPEDFAN 399 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEE--CCCGGGCCGGGGTT
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEE--ecchhcccccccCC
Confidence 5689999999999999887652 10124678888 7788877322 1111 010 11222 234 88
Q ss_pred cceeEehhhhcc-c------------------------cccCC-HHHHHHHHHhhhcCCcEEEEEcChhHH-------HH
Q 020011 244 YDLLHLDGLFTA-E------------------------SHRCD-MKFVLLEMDRILRPNGYVIVRESSYFI-------DA 290 (332)
Q Consensus 244 FDlVh~s~vf~h-~------------------------~~~c~-~~~iL~EmdRVLRPGG~lii~d~~~~~-------~~ 290 (332)
||+|.|+==+.. . ....+ ...++..+.+.|||||.+.+.-+..++ .+
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kk 479 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKA 479 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHH
Confidence 999999622210 0 00011 234788899999999999999888766 34
Q ss_pred HHHH-HhcCcceeeecccc-----cccccceEEEEEec
Q 020011 291 VATI-AKGMKWSCHKEDTE-----YGVEKEKLLLCQKK 322 (332)
Q Consensus 291 i~~i-~~~l~W~~~~~~~e-----~~~~~e~~li~~K~ 322 (332)
+++. ++...-...+.... ++...--|+|.+|.
T Consensus 480 LRk~LLe~~~I~aIIdLP~~~~F~~asv~T~ILIlrK~ 517 (878)
T 3s1s_A 480 FREFLVGNFGLEHIFLYPREGLFEEVIKDTVVFVGRKG 517 (878)
T ss_dssp HHHHHTTTTCEEEEEECCBCCSSCSCBCCEEEEEEETT
T ss_pred HHHHHHhCCCeEEEEECCCccccCCCCCcEEEEEEEcC
Confidence 5554 44444443333222 11223347777775
No 270
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.26 E-value=0.0011 Score=62.76 Aligned_cols=98 Identities=15% Similarity=0.093 Sum_probs=56.9
Q ss_pred CCeEEEecCcchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhc----Cccc--cc-ccccccCCC-CC--CccceeE
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDR----GLIG--TY-HDWCEAFST-YP--RTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eR----Glig--~~-~d~~e~~~~-yp--~sFDlVh 248 (332)
..+|||+|||+|+.+.+|++. +. -.|+.+|. +.+++.+.++ |+.. .+ .|. ..+.+ .+ .+||.|.
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~--g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~-~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQ--GKIFAFDLDAKRLASMATLLARAGVSCCELAEEDF-LAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG-GGSCTTCGGGTTEEEEE
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCh-HhcCccccccCCCCEEE
Confidence 568999999999999988873 21 13567777 7777766655 5421 11 111 11222 11 5799999
Q ss_pred eh------hhhccccc--------cCCH-------HHHHHHHHhhhcCCcEEEEEc
Q 020011 249 LD------GLFTAESH--------RCDM-------KFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 249 ~s------~vf~h~~~--------~c~~-------~~iL~EmdRVLRPGG~lii~d 283 (332)
++ .++.+-++ ..++ ..+|....+.|+ ||.++.+.
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 73 33332111 1122 246777888887 99999865
No 271
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.24 E-value=0.00025 Score=67.06 Aligned_cols=68 Identities=4% Similarity=-0.125 Sum_probs=45.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc-ccccccccccCC--CCC-CccceeEehhh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL-IGTYHDWCEAFS--TYP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl-ig~~~d~~e~~~--~yp-~sFDlVh~s~v 252 (332)
..+|||+|||+|.++..|++++. .|+++|. +++++.+.++-- .+.+.-.+..+. +++ .+||+|+++.-
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~~~---~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv~NlP 123 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKNAK---KVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVANLP 123 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSS---EEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEEEECC
T ss_pred cCEEEEECCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCccEEEEeCc
Confidence 56899999999999999998865 5677777 778887776520 011111112223 355 67999998843
No 272
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.22 E-value=0.00024 Score=66.36 Aligned_cols=64 Identities=11% Similarity=0.004 Sum_probs=43.4
Q ss_pred eEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCC--CC--CccceeEeh
Q 020011 184 NVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFST--YP--RTYDLLHLD 250 (332)
Q Consensus 184 ~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~--yp--~sFDlVh~s 250 (332)
+|||+|||+|.++..|++++. .|+++|. +++++.+.++--.+.+.-.+..+.. ++ ..||.|.++
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~---~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~N 117 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGA---EVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVAN 117 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTC---CEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEEE
T ss_pred eEEEEeCchHHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEec
Confidence 899999999999999999875 4677777 8888888776321111111122222 33 268888877
No 273
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.18 E-value=0.00063 Score=69.47 Aligned_cols=139 Identities=14% Similarity=0.062 Sum_probs=80.0
Q ss_pred eEEEecCcchHHHHHHhcC--------C------CeEEEEeecCc-hhhHHHHHhc----Ccccccccccc-cC--CCCC
Q 020011 184 NVMDMNTLYGGFAAAVIDD--------P------LWVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCE-AF--STYP 241 (332)
Q Consensus 184 ~VLD~GCG~Ggfaa~L~~~--------~------v~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e-~~--~~yp 241 (332)
+|||.+||+|+|...+.+. . ....++.++|. +.++.+|.-. |+...++-.+. .+ ..++
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~ 326 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHP 326 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCT
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccc
Confidence 8999999999998765431 0 00247889999 8888877643 43222110112 22 2245
Q ss_pred -CccceeEehhhhcc-------------------------ccccCCH-HHHHHHHHhhhcCCcEEEEEcChhHH------
Q 020011 242 -RTYDLLHLDGLFTA-------------------------ESHRCDM-KFVLLEMDRILRPNGYVIVRESSYFI------ 288 (332)
Q Consensus 242 -~sFDlVh~s~vf~h-------------------------~~~~c~~-~~iL~EmdRVLRPGG~lii~d~~~~~------ 288 (332)
..||+|.++==|.. ++..... -.++..+.+.|||||.+.+.-+..++
T Consensus 327 ~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~ 406 (544)
T 3khk_A 327 DLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNN 406 (544)
T ss_dssp TCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCGGG
T ss_pred cccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCcch
Confidence 78999999633331 1111111 14788999999999998887766443
Q ss_pred -HHHHHH-HhcCcceeeecccc----cccccceEEEEEec
Q 020011 289 -DAVATI-AKGMKWSCHKEDTE----YGVEKEKLLLCQKK 322 (332)
Q Consensus 289 -~~i~~i-~~~l~W~~~~~~~e----~~~~~e~~li~~K~ 322 (332)
.++++. .+.-.-...+.-.. ....+--|||.+|.
T Consensus 407 ~~~iRk~Lle~~~l~aII~LP~~lF~~t~i~t~Ilvl~K~ 446 (544)
T 3khk_A 407 EGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKD 446 (544)
T ss_dssp HHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEEEEEEESC
T ss_pred HHHHHHHHHhCCcHhEEEECCCCCCCCCCCCeEEEEEecC
Confidence 345553 44333333332111 11134567777775
No 274
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.11 E-value=0.0019 Score=59.15 Aligned_cols=41 Identities=10% Similarity=0.131 Sum_probs=35.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR 224 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR 224 (332)
..+|||+|||+|.++..|++++. -.|+++|. +++++.+.++
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~~~--~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQHPL--KKLYVIELDREMVENLKSI 73 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTSCC--SEEEEECCCHHHHHHHTTS
T ss_pred cCEEEEEcCchHHHHHHHHHcCC--CeEEEEECCHHHHHHHHhc
Confidence 56899999999999999999852 25788888 8899999887
No 275
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.05 E-value=0.00036 Score=69.10 Aligned_cols=145 Identities=12% Similarity=0.033 Sum_probs=76.9
Q ss_pred HHHHHHhhcCCCCCCCCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc------Cc--cccccccccc
Q 020011 166 RVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR------GL--IGTYHDWCEA 236 (332)
Q Consensus 166 ~v~~y~~~l~~l~~~~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR------Gl--ig~~~d~~e~ 236 (332)
.++.|+..+ +.. ..+|||+|||+|.++.+|+..+. .|+++|. +.+++.|.++ |+ +-.++.-...
T Consensus 82 ~vA~~~a~~--l~~--g~~VLDLgcG~G~~al~LA~~g~---~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~ 154 (410)
T 3ll7_A 82 VTSSYKSRF--IRE--GTKVVDLTGGLGIDFIALMSKAS---QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKE 154 (410)
T ss_dssp HHHHHGGGG--SCT--TCEEEESSCSSSHHHHHHHTTCS---EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGG
T ss_pred HHHHHHHHh--cCC--CCEEEEeCCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHH
Confidence 455565422 322 47899999999999999998875 5788888 8888887665 44 1112111111
Q ss_pred CCC-CC-CccceeEehhhhcc-------ccccCCHHHHHHHHHhhhc-CCcEEEEEcChhHHHHHHHHHhcCcceeeecc
Q 020011 237 FST-YP-RTYDLLHLDGLFTA-------ESHRCDMKFVLLEMDRILR-PNGYVIVRESSYFIDAVATIAKGMKWSCHKED 306 (332)
Q Consensus 237 ~~~-yp-~sFDlVh~s~vf~h-------~~~~c~~~~iL~EmdRVLR-PGG~lii~d~~~~~~~i~~i~~~l~W~~~~~~ 306 (332)
+++ ++ ++||+|+++=-... ....| .--+.++.++|+ -+..+++.-.+.+ .+....+.+.|...++-
T Consensus 155 ~L~~~~~~~fDvV~lDPPrr~~~~grv~~led~--~P~l~~~~~~l~~~~~~~~vK~sP~l--d~~~~~~~l~~~~ev~~ 230 (410)
T 3ll7_A 155 YLPLIKTFHPDYIYVDPARRSGADKRVYAIADC--EPDLIPLATELLPFCSSILAKLSPMI--DLWDTLQSLLHVQELHV 230 (410)
T ss_dssp SHHHHHHHCCSEEEECCEEC-----CCCCGGGE--ESCHHHHHHHHGGGSSEEEEEECTTS--CHHHHHHHCSSEEEEEE
T ss_pred hhhhccCCCceEEEECCCCcCCCCceEEehhhc--CCCHHHHHHHHHhhCCcEEEEcCCCC--ChHHHHhhCCCCcEEEE
Confidence 111 23 68999999511110 00011 124556666544 4556666554432 11222334445444332
Q ss_pred c-ccccccceEEEEEe
Q 020011 307 T-EYGVEKEKLLLCQK 321 (332)
Q Consensus 307 ~-e~~~~~e~~li~~K 321 (332)
. .++..+|-+|++.+
T Consensus 231 vSv~ge~kE~~l~~~~ 246 (410)
T 3ll7_A 231 VAAHGEVKELLVRMSL 246 (410)
T ss_dssp EEETTEEEEEEEEECT
T ss_pred EEeCCeEEEEEEEecC
Confidence 1 22334565555543
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.00 E-value=0.0005 Score=72.50 Aligned_cols=127 Identities=13% Similarity=0.050 Sum_probs=69.6
Q ss_pred cccccccccchhhHHH---HHHHHH-hhcCCCCCCCCCeEEEecCcchHHHH----HHhcCC--------CeEEEEeecC
Q 020011 150 GGSASAFKHDDSKWNV---RVKHYK-KLLPALGTDKIRNVMDMNTLYGGFAA----AVIDDP--------LWVMNVVSSY 213 (332)
Q Consensus 150 g~~~~~F~~d~~~W~~---~v~~y~-~~l~~l~~~~~r~VLD~GCG~Ggfaa----~L~~~~--------v~vmnv~p~d 213 (332)
....+.|+.|.-+... .+.... ...+. .+....|||+|||+|-+.. +.+..+ .....|..++
T Consensus 376 s~tYe~fekD~vRy~~Y~~AI~~al~d~~~~--~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVE 453 (745)
T 3ua3_A 376 SGVYNTFEQDQIKYDVYGEAVVGALKDLGAD--GRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVE 453 (745)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT--CCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEE
T ss_pred hHHHHHHcCChhhHHHHHHHHHHHHHHhhcc--cCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEe
Confidence 4568889998765543 333322 22221 1234569999999998742 111111 0112344444
Q ss_pred c-hhh---HHHHHhcCc---ccccccccccCCCC------CCccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEE
Q 020011 214 A-ANT---LAVVYDRGL---IGTYHDWCEAFSTY------PRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVI 280 (332)
Q Consensus 214 ~-~~~---l~~a~eRGl---ig~~~d~~e~~~~y------p~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~li 280 (332)
. +++ ++.....|+ +-.++.-.+.+. . |...|+|++-. +.++-+.+.....|.-++|.|||||.+|
T Consensus 454 knp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~-lp~~~~~~ekVDIIVSEl-mGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 454 KNPNAIVTLKYMNVRTWKRRVTIIESDMRSLP-GIAKDRGFEQPDIIVSEL-LGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp CCHHHHHHHHHHHHHTTTTCSEEEESCGGGHH-HHHHHTTCCCCSEEEECC-CBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CChHHHHHHHHHHhcCCCCeEEEEeCchhhcc-cccccCCCCcccEEEEec-cccccchhccHHHHHHHHHhCCCCcEEE
Confidence 4 322 333333454 333332223221 2 57899998753 3443334566778888899999999865
No 277
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=96.82 E-value=0.014 Score=57.21 Aligned_cols=88 Identities=16% Similarity=0.156 Sum_probs=55.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhcCcccccccccccCCCCC--CccceeEehhhhcccccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWCEAFSTYP--RTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eRGlig~~~d~~e~~~~yp--~sFDlVh~s~vf~h~~~~ 259 (332)
..+|||+||.+||++..|++++.. |+++|...+-+...+-+.+ .|--+.+|..-| +.||+|.|..+.
T Consensus 212 G~~vlDLGAaPGGWT~~l~~rg~~---V~aVD~~~l~~~l~~~~~V--~~~~~d~~~~~~~~~~~D~vvsDm~~------ 280 (375)
T 4auk_A 212 GMWAVDLGACPGGWTYQLVKRNMW---VYSVDNGPMAQSLMDTGQV--TWLREDGFKFRPTRSNISWMVCDMVE------ 280 (375)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCE---EEEECSSCCCHHHHTTTCE--EEECSCTTTCCCCSSCEEEEEECCSS------
T ss_pred CCEEEEeCcCCCHHHHHHHHCCCE---EEEEEhhhcChhhccCCCe--EEEeCccccccCCCCCcCEEEEcCCC------
Confidence 578999999999999999999874 4555542222233332222 222223333323 689999998653
Q ss_pred CCHHHHHHHHHhhhcCC---cEEEE
Q 020011 260 CDMKFVLLEMDRILRPN---GYVIV 281 (332)
Q Consensus 260 c~~~~iL~EmdRVLRPG---G~lii 281 (332)
....++.-|.+.|..| +.++.
T Consensus 281 -~p~~~~~l~~~wl~~~~~~~aI~~ 304 (375)
T 4auk_A 281 -KPAKVAALMAQWLVNGWCRETIFN 304 (375)
T ss_dssp -CHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred -ChHHhHHHHHHHHhccccceEEEE
Confidence 4556777777777765 55444
No 278
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=96.82 E-value=0.0049 Score=55.42 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=25.6
Q ss_pred CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 242 RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 242 ~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.+||+|+...-+ ....+.+.-+.|||||.+++.+
T Consensus 121 ~~fDlIfIDg~k--------~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 121 RHPDVVLVDGRF--------RVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp CCCSEEEECSSS--------HHHHHHHHHHHCSSCEEEEETT
T ss_pred CCCCEEEEeCCC--------chhHHHHHHHhcCCCeEEEEeC
Confidence 789999998522 2355666779999999997655
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=96.79 E-value=0.00049 Score=63.95 Aligned_cols=105 Identities=15% Similarity=0.087 Sum_probs=58.0
Q ss_pred CeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhh-------HHHHHhc----C-c---ccccccccccCC-CCCCccc
Q 020011 183 RNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANT-------LAVVYDR----G-L---IGTYHDWCEAFS-TYPRTYD 245 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~-------l~~a~eR----G-l---ig~~~d~~e~~~-~yp~sFD 245 (332)
.+|||++||+|.++..|+.++.. |+.+|. +.. ++.+.+. | + +-.++.-...++ .++.+||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~---V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCR---VRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCC---EEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcCCE---EEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCC
Confidence 68999999999999999988763 455665 432 3333211 1 1 111211112223 3456799
Q ss_pred eeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHH
Q 020011 246 LLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIA 295 (332)
Q Consensus 246 lVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~ 295 (332)
+|.++-.|.+-.. ..++.+.-|+||+.+-- -.+..+.++.+..++
T Consensus 167 vV~lDP~y~~~~~----saavkk~~~~lr~l~~~-~~~~~~ll~~a~~~a 211 (258)
T 2oyr_A 167 VVYLDPMFPHKQK----SALVKKEMRVFQSLVGP-DLDADGLLEPARLLA 211 (258)
T ss_dssp EEEECCCCCCCCC---------HHHHHHHHHSCC-CTTGGGGHHHHHHHC
T ss_pred EEEEcCCCCCccc----chHHHHHHHHHHHhhcC-CccHHHHHHHHHHhc
Confidence 9999977765321 14667777888886511 111234455655555
No 280
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=96.69 E-value=0.0052 Score=62.71 Aligned_cols=141 Identities=9% Similarity=0.019 Sum_probs=80.6
Q ss_pred CCCeEEEecCcchHHHHHHhcC---CCeEEEEeecCc-hhhHHHHHhc----Cccc-cccccc-ccCCC----CC-Cccc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD---PLWVMNVVSSYA-ANTLAVVYDR----GLIG-TYHDWC-EAFST----YP-RTYD 245 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~---~v~vmnv~p~d~-~~~l~~a~eR----Glig-~~~d~~-e~~~~----yp-~sFD 245 (332)
...+|||.+||+|+|...+.+. .. ..++.++|. +.+..+|.-. |+.. ..+-.+ ..+.. ++ ..||
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~-~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQ-TVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCEEeecccchhHHHHHHHHHHHhcc-CceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 4568999999999988666543 11 136788888 7777777543 4421 111111 22222 44 7899
Q ss_pred eeEehhhhcc-------------------ccccCCH-HHHHHHHHhhhc-CCcEEEEEcChhHH------HHHHHH-Hhc
Q 020011 246 LLHLDGLFTA-------------------ESHRCDM-KFVLLEMDRILR-PNGYVIVRESSYFI------DAVATI-AKG 297 (332)
Q Consensus 246 lVh~s~vf~h-------------------~~~~c~~-~~iL~EmdRVLR-PGG~lii~d~~~~~------~~i~~i-~~~ 297 (332)
+|.++==|.. ++...+. -.+++.+.+.|+ |||.+.+.-+..++ .++++. .+.
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~ 379 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEE 379 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHT
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhC
Confidence 9998622210 1111111 137899999999 99999888777654 345554 444
Q ss_pred Ccceeeecccc----cccccceEEEEEec
Q 020011 298 MKWSCHKEDTE----YGVEKEKLLLCQKK 322 (332)
Q Consensus 298 l~W~~~~~~~e----~~~~~e~~li~~K~ 322 (332)
-.-...+.-.. ....+--|+|.+|.
T Consensus 380 ~~l~~II~LP~~lF~~t~i~t~Ilvl~K~ 408 (542)
T 3lkd_A 380 GAIDTVIGLPANIFFNTSIPTTVIILKKN 408 (542)
T ss_dssp TCEEEEEECCSSCSSSCCCCEEEEEECSS
T ss_pred CceeEEEEccccccCCCCCcEEEEEEecC
Confidence 44343332111 11134457777765
No 281
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.68 E-value=0.0031 Score=59.91 Aligned_cols=102 Identities=15% Similarity=0.154 Sum_probs=62.6
Q ss_pred CCCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCchhhHHHHHhc------Cc-----cc-ccccccccCCCC-CCccc
Q 020011 180 DKIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYAANTLAVVYDR------GL-----IG-TYHDWCEAFSTY-PRTYD 245 (332)
Q Consensus 180 ~~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~~~~l~~a~eR------Gl-----ig-~~~d~~e~~~~y-p~sFD 245 (332)
.+.++||=+|-|-|+.++.+.+. ++--+.++.+| +..++++.+- |. +- .+.|- -.+.-- +++||
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID-~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg-~~~l~~~~~~yD 159 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEID-AGVVSFCRQYLPNHNAGSYDDPRFKLVIDDG-VNFVNQTSQTFD 159 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESC-HHHHHHHHHHCHHHHTTGGGCTTEEEEESCT-TTTTSCSSCCEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCC-HHHHHHHHhcCccccccccCCCcEEEEechH-HHHHhhccccCC
Confidence 34789999999999999999886 44334455554 5566666443 11 00 11111 112223 38999
Q ss_pred eeEehhhhccccccCC-HHHHHHHHHhhhcCCcEEEEEc
Q 020011 246 LLHLDGLFTAESHRCD-MKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 246 lVh~s~vf~h~~~~c~-~~~iL~EmdRVLRPGG~lii~d 283 (332)
+|.....=..-+.... -..++..+.|+|+|||.++...
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 9998632111010000 1368999999999999999864
No 282
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=96.67 E-value=0.0015 Score=60.37 Aligned_cols=73 Identities=23% Similarity=0.301 Sum_probs=41.5
Q ss_pred ccceeEehhhhccccccCC-HHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCcceeeeccccccc-ccceEEEEE
Q 020011 243 TYDLLHLDGLFTAESHRCD-MKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHKEDTEYGV-EKEKLLLCQ 320 (332)
Q Consensus 243 sFDlVh~s~vf~h~~~~c~-~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~~~~~~e~~~-~~e~~li~~ 320 (332)
.||+|+... |+--.+... -..+|.+|.|+|||||.|+.-..... ++.-+..--.++... .+. .+..++++.
T Consensus 173 ~~D~iflD~-fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa~~---vrr~L~~aGF~v~~~---~g~~~kr~m~~a~ 245 (257)
T 2qy6_A 173 KVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGF---VRRGLQEAGFTMQKR---KGFGRKREMLCGV 245 (257)
T ss_dssp CEEEEEECS-SCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCBHH---HHHHHHHHTEEEEEE---CCSTTCCCEEEEE
T ss_pred eEEEEEECC-CCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCCHH---HHHHHHHCCCEEEeC---CCCCCCCceEEEE
Confidence 799999863 331111110 25799999999999999997444433 222222222333322 122 455688877
Q ss_pred ec
Q 020011 321 KK 322 (332)
Q Consensus 321 K~ 322 (332)
|.
T Consensus 246 ~~ 247 (257)
T 2qy6_A 246 ME 247 (257)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 283
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=96.65 E-value=0.00075 Score=63.94 Aligned_cols=42 Identities=12% Similarity=0.235 Sum_probs=34.3
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR 224 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR 224 (332)
..+|||+|||+|+++.+|+++.- ...|+++|. +++++.|.++
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~ 69 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEK 69 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHH
Confidence 46899999999999999988621 125788898 9999998876
No 284
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.64 E-value=0.0011 Score=61.12 Aligned_cols=40 Identities=8% Similarity=0.143 Sum_probs=34.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR 224 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR 224 (332)
..+|||+|||+|.++..|++++. .|+++|. +++++.+.++
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~~~---~V~avEid~~~~~~~~~~ 70 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTECD---NLALVEIDRDLVAFLQKK 70 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTTSS---EEEEEECCHHHHHHHHHH
T ss_pred cCEEEEEcccccHHHHHHHHhCC---EEEEEECCHHHHHHHHHH
Confidence 56899999999999999999875 5677888 8888888776
No 285
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.61 E-value=0.003 Score=66.33 Aligned_cols=82 Identities=9% Similarity=-0.026 Sum_probs=45.4
Q ss_pred EEeecCc-hhhHHHHHhc----Cccccc----ccccccCCCCC-CccceeEehhhhc-cccccCCHHHHHHHHH---hhh
Q 020011 208 NVVSSYA-ANTLAVVYDR----GLIGTY----HDWCEAFSTYP-RTYDLLHLDGLFT-AESHRCDMKFVLLEMD---RIL 273 (332)
Q Consensus 208 nv~p~d~-~~~l~~a~eR----Glig~~----~d~~e~~~~yp-~sFDlVh~s~vf~-h~~~~c~~~~iL~Emd---RVL 273 (332)
.|.++|. +.+++.|... |+...+ .|..+...+++ ++||+|.|+==+. .+.+..++..+..++. |.+
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhh
Confidence 5788888 8888877765 443211 11111112333 3899999982221 1111223444444444 455
Q ss_pred cCCcEEEEEcChhHHH
Q 020011 274 RPNGYVIVRESSYFID 289 (332)
Q Consensus 274 RPGG~lii~d~~~~~~ 289 (332)
.|||.+++..+...+.
T Consensus 338 ~~g~~~~ilt~~~~l~ 353 (703)
T 3v97_A 338 FGGWNLSLFSASPDLL 353 (703)
T ss_dssp CTTCEEEEEESCHHHH
T ss_pred CCCCeEEEEeCCHHHH
Confidence 5899999887766543
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.48 E-value=0.0099 Score=55.93 Aligned_cols=77 Identities=21% Similarity=0.194 Sum_probs=51.7
Q ss_pred cCCCCC-CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC---hhHHHHHHHHHhcCcceeeeccccccc
Q 020011 236 AFSTYP-RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES---SYFIDAVATIAKGMKWSCHKEDTEYGV 311 (332)
Q Consensus 236 ~~~~yp-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~---~~~~~~i~~i~~~l~W~~~~~~~e~~~ 311 (332)
.+..++ .+||+||...-. + ......|..+.+.|+|||++++.|- ......+.++.+...+...+....
T Consensus 201 tL~~~~~~~~d~vfIDaD~--y---~~~~~~Le~~~p~L~pGGiIv~DD~~~~~G~~~Av~Ef~~~~~i~~~i~~~~--- 272 (282)
T 2wk1_A 201 TLPTAPIDTLAVLRMDGDL--Y---ESTWDTLTNLYPKVSVGGYVIVDDYMMCPPCKDAVDEYRAKFDIADELITID--- 272 (282)
T ss_dssp HSTTCCCCCEEEEEECCCS--H---HHHHHHHHHHGGGEEEEEEEEESSCTTCHHHHHHHHHHHHHTTCCSCCEECS---
T ss_pred HHhhCCCCCEEEEEEcCCc--c---ccHHHHHHHHHhhcCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCceEEEEec---
Confidence 345576 899999998422 1 1134688889999999999999884 334566677777666665544322
Q ss_pred ccceEEEEEec
Q 020011 312 EKEKLLLCQKK 322 (332)
Q Consensus 312 ~~e~~li~~K~ 322 (332)
...++++|.
T Consensus 273 --~~~v~~rk~ 281 (282)
T 2wk1_A 273 --RDGVYWQRT 281 (282)
T ss_dssp --SSCEEEECC
T ss_pred --CEEEEEEeC
Confidence 346777774
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.34 E-value=0.011 Score=51.17 Aligned_cols=100 Identities=12% Similarity=0.115 Sum_probs=59.9
Q ss_pred ccchhhHHHHHHHHHhhcCCCCCCCCCeEEEecCcch-HHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccccccc
Q 020011 157 KHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYG-GFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDW 233 (332)
Q Consensus 157 ~~d~~~W~~~v~~y~~~l~~l~~~~~r~VLD~GCG~G-gfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~ 233 (332)
+..++.|.. +..|... .+.. ..+|||+|||.| ..|.+|++ .++ +|+.+|. +..++ .+.|
T Consensus 16 ~~~~~m~e~-LaeYI~~--~~~~--~~rVlEVG~G~g~~vA~~La~~~g~---~V~atDInp~Av~---------~v~d- 77 (153)
T 2k4m_A 16 PRGSHMWND-LAVYIIR--CSGP--GTRVVEVGAGRFLYVSDYIRKHSKV---DLVLTDIKPSHGG---------IVRD- 77 (153)
T ss_dssp CCCCHHHHH-HHHHHHH--HSCS--SSEEEEETCTTCCHHHHHHHHHSCC---EEEEECSSCSSTT---------EECC-
T ss_pred cchhhHHHH-HHHHHHh--cCCC--CCcEEEEccCCChHHHHHHHHhCCC---eEEEEECCccccc---------eEEc-
Confidence 445566555 4455421 1221 358999999999 69999997 776 5677776 55554 1111
Q ss_pred cccCCCCC---CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 234 CEAFSTYP---RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 234 ~e~~~~yp---~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
..|.+.. ..||+|++-+ + +.++...+.++.+-. |.-++|+-
T Consensus 78 -DiF~P~~~~Y~~~DLIYsir-----P-P~El~~~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 78 -DITSPRMEIYRGAALIYSIR-----P-PAEIHSSLMRVADAV--GARLIIKP 121 (153)
T ss_dssp -CSSSCCHHHHTTEEEEEEES-----C-CTTTHHHHHHHHHHH--TCEEEEEC
T ss_pred -cCCCCcccccCCcCEEEEcC-----C-CHHHHHHHHHHHHHc--CCCEEEEc
Confidence 2345544 4899998862 2 345556666665533 44455543
No 288
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=96.23 E-value=0.0014 Score=61.28 Aligned_cols=43 Identities=9% Similarity=0.062 Sum_probs=33.9
Q ss_pred CCeEEEecCcchHHHHHHhcCCCe-EEEEeecCc-hhhHHHHHhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLW-VMNVVSSYA-ANTLAVVYDR 224 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~-vmnv~p~d~-~~~l~~a~eR 224 (332)
..+|||+|||+|.++..|++++.. ...|+++|. +++++.+.++
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH
T ss_pred cCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh
Confidence 568999999999999999886542 001677788 8899988877
No 289
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.13 E-value=0.0098 Score=58.43 Aligned_cols=116 Identities=10% Similarity=0.097 Sum_probs=66.0
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhcC--cccc-c--------cc-cccc--CC-CC--C-C
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRG--LIGT-Y--------HD-WCEA--FS-TY--P-R 242 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eRG--lig~-~--------~d-~~e~--~~-~y--p-~ 242 (332)
..++||=+|-|-|+.++.+.+.+.-.+.++.+| +..++++.+-- +.+. + +- ...+ +. .+ . +
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEID-p~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEID-QMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESC-HHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccC-HHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 468999999999999999998776434444444 66777776531 0000 0 00 0011 11 11 1 5
Q ss_pred ccceeEehhhhccc----cccCC----HHHHHHHHHhhhcCCcEEEEEcCh----hHHHHHHHHHhcC
Q 020011 243 TYDLLHLDGLFTAE----SHRCD----MKFVLLEMDRILRPNGYVIVRESS----YFIDAVATIAKGM 298 (332)
Q Consensus 243 sFDlVh~s~vf~h~----~~~c~----~~~iL~EmdRVLRPGG~lii~d~~----~~~~~i~~i~~~l 298 (332)
.||+|.... +..- +.... -..++..+.|+|+|||.++..... +....+.+..+++
T Consensus 284 ~yDvIIvDl-~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~v 350 (381)
T 3c6k_A 284 EFDYVINDL-TAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRL 350 (381)
T ss_dssp CEEEEEEEC-CSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTS
T ss_pred ceeEEEECC-CCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHh
Confidence 799999762 2110 00000 135788899999999999985432 3334444444544
No 290
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.12 E-value=0.0051 Score=59.77 Aligned_cols=101 Identities=19% Similarity=0.181 Sum_probs=59.6
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHH---hc-Ccc---------cccccccccCCCC-CCccc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVY---DR-GLI---------GTYHDWCEAFSTY-PRTYD 245 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~---eR-Gli---------g~~~d~~e~~~~y-p~sFD 245 (332)
...+||||.||.||=+.+|++.+.- -.|+..|. +..+..+. +| |+. ...+| ...+..+ +++||
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~-~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D-~~~~~~~~~~~fD 225 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCC-RNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWD-GRKWGELEGDTYD 225 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCE-EEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCC-GGGHHHHSTTCEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCC-CcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCc-hhhcchhccccCC
Confidence 3578999999999999999886542 24667776 44444333 22 221 01111 1112223 38999
Q ss_pred eeEe----hh----hhccccc---cC---C---H----HHHHHHHHhhhcCCcEEEEEc
Q 020011 246 LLHL----DG----LFTAESH---RC---D---M----KFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 246 lVh~----s~----vf~h~~~---~c---~---~----~~iL~EmdRVLRPGG~lii~d 283 (332)
.|.+ |. ++..-++ +- + + ..+|....+.|||||.|+.+.
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 9985 32 2211100 00 0 1 247888899999999999987
No 291
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.49 E-value=0.058 Score=51.63 Aligned_cols=108 Identities=17% Similarity=0.150 Sum_probs=58.4
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHH-----HHHhcCcccccccccccCCCCC-CccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLA-----VVYDRGLIGTYHDWCEAFSTYP-RTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~-----~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~s~vf~ 254 (332)
..+|||+||++|||..+.+...- +..|.++|. ...-. .-+.-.++ .+..-. .+-..+ ..+|+|.|.-. +
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P~~~~ql~w~lV-~~~~~~-Dv~~l~~~~~D~ivcDig-e 170 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEPQLVQSYGWNIV-TMKSGV-DVFYRPSECCDTLLCDIG-E 170 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCCCCCCBTTGGGE-EEECSC-CTTSSCCCCCSEEEECCC-C
T ss_pred CCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCcchhhhcCCcce-EEEecc-CHhhCCCCCCCEEEEECc-c
Confidence 34899999999999997766532 246777776 22000 00000011 111000 111122 66999999855 3
Q ss_pred cccccCCHH-----HHHHHHHhhhcCC-cEEEEEcC----hhHHHHHHHH
Q 020011 255 AESHRCDMK-----FVLLEMDRILRPN-GYVIVRES----SYFIDAVATI 294 (332)
Q Consensus 255 h~~~~c~~~-----~iL~EmdRVLRPG-G~lii~d~----~~~~~~i~~i 294 (332)
--+++ .++ .+|.=+-+.|++| |-|++-.- ++++++++.+
T Consensus 171 Ss~~~-~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~l 219 (321)
T 3lkz_A 171 SSSSA-EVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMELL 219 (321)
T ss_dssp CCSCH-HHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHHH
T ss_pred CCCCh-hhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHHH
Confidence 22211 122 1444446788999 89998663 4555666554
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.26 E-value=0.012 Score=55.31 Aligned_cols=94 Identities=13% Similarity=0.036 Sum_probs=49.1
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEE----EeecCchhhHHHHHh-cCc--cccc-c-cccccCCCC-CCccceeEeh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMN----VVSSYAANTLAVVYD-RGL--IGTY-H-DWCEAFSTY-PRTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmn----v~p~d~~~~l~~a~e-RGl--ig~~-~-d~~e~~~~y-p~sFDlVh~s 250 (332)
..+|||+||+.||++.+.+++ ++ .. +.+.|. ...++... .|. +-.. . |.. .. +..||+|.|.
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~~v--g~V~G~vig~D~-~~~P~~~~~~Gv~~i~~~~G~Df~----~~~~~~~DvVLSD 146 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMKNV--QEVRGYTKGGPG-HEEPMLMQSYGWNIVTMKSGVDVF----YKPSEISDTLLCD 146 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTSTTE--EEEEEECCCSTT-SCCCCCCCSTTGGGEEEECSCCGG----GSCCCCCSEEEEC
T ss_pred CCEEEEcCCCCCHHHHHHhhhcCC--CCceeEEEcccc-ccCCCcccCCCceEEEeeccCCcc----CCCCCCCCEEEeC
Confidence 568999999999999999886 22 22 234441 00000000 111 1000 1 211 12 3789999997
Q ss_pred hhhcccccc----CCHHHHHHHHHhhhcCCc-EEEEEc
Q 020011 251 GLFTAESHR----CDMKFVLLEMDRILRPNG-YVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~----c~~~~iL~EmdRVLRPGG-~lii~d 283 (332)
..=. -.++ .....+|.=+.++|+||| .|++-.
T Consensus 147 MAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 147 IGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp CCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEE
Confidence 5322 1110 000123433348999999 888754
No 293
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=95.11 E-value=0.011 Score=54.26 Aligned_cols=40 Identities=3% Similarity=-0.032 Sum_probs=31.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR 224 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR 224 (332)
..+|||+|||+|.++. |.. +.. ..|+++|. +++++.+.++
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~-~~~-~~v~avEid~~~~~~a~~~ 62 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVG-ERL-DQLTVIELDRDLAARLQTH 62 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHH-TTC-SCEEEECCCHHHHHHHHTC
T ss_pred cCEEEEECCCCcHHHH-hhh-CCC-CeEEEEECCHHHHHHHHHH
Confidence 5689999999999999 754 331 02677888 8899988876
No 294
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.56 E-value=0.027 Score=52.33 Aligned_cols=40 Identities=13% Similarity=-0.092 Sum_probs=34.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR 224 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR 224 (332)
...|||.+||+|+++.+++..+. ++.++|. +.+++.|.+|
T Consensus 236 ~~~vlD~f~GsGt~~~~a~~~g~---~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAARWGR---RALGVELVPRYAQLAKER 276 (297)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHcCC---eEEEEeCCHHHHHHHHHH
Confidence 45899999999999999988886 5678888 8899888877
No 295
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=94.08 E-value=0.31 Score=46.85 Aligned_cols=128 Identities=13% Similarity=0.133 Sum_probs=65.1
Q ss_pred CCCeEEEecC------cchHHHHH-HhcCCCeEEE--EeecCc-hhhHHHHHhcCcccccccccccCCCCC-CccceeEe
Q 020011 181 KIRNVMDMNT------LYGGFAAA-VIDDPLWVMN--VVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYP-RTYDLLHL 249 (332)
Q Consensus 181 ~~r~VLD~GC------G~Ggfaa~-L~~~~v~vmn--v~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp-~sFDlVh~ 249 (332)
...+|||+|| -.|++... +...+..+++ +.++.. .+ --+.|. |.. .+. +.||+|.+
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~sda~-------~~IqGD----~~~--~~~~~k~DLVIS 175 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDAD-------STLIGD----CAT--VHTANKWDLIIS 175 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBCSSS-------EEEESC----GGG--EEESSCEEEEEE
T ss_pred CCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcccccCCC-------eEEEcc----ccc--cccCCCCCEEEe
Confidence 4678999996 78886433 3233323333 333332 11 002232 222 223 88999998
Q ss_pred hhhhc---ccc-c---cCCHHHHHHHH-HhhhcCCcEEEEEcChhH-HHHHHHHHhcCcceeeecccccccccceEEEEE
Q 020011 250 DGLFT---AES-H---RCDMKFVLLEM-DRILRPNGYVIVRESSYF-IDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQ 320 (332)
Q Consensus 250 s~vf~---h~~-~---~c~~~~iL~Em-dRVLRPGG~lii~d~~~~-~~~i~~i~~~l~W~~~~~~~e~~~~~e~~li~~ 320 (332)
...=. +.. + -..+..+..|+ .++|+|||.|++-....- -+.+.++.+.+.+-......-....+|-+||++
T Consensus 176 DMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L~~lrk~F~~VK~fK~ASRa~SsEvYLVG~ 255 (344)
T 3r24_A 176 DMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIGA 255 (344)
T ss_dssp CCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEE
T ss_pred cCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHHHHHHhhCCeEEEECCCCCCCCeeEEEEee
Confidence 64321 110 0 11244555555 458999999999653311 133444544443322222111222678899986
Q ss_pred e
Q 020011 321 K 321 (332)
Q Consensus 321 K 321 (332)
.
T Consensus 256 g 256 (344)
T 3r24_A 256 N 256 (344)
T ss_dssp E
T ss_pred e
Confidence 5
No 296
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=93.11 E-value=0.036 Score=65.74 Aligned_cols=40 Identities=18% Similarity=0.270 Sum_probs=16.5
Q ss_pred CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 242 RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 242 ~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
.+||+|+++++|+-.+ ++...|..+.++|||||++++.+.
T Consensus 1310 ~~ydlvia~~vl~~t~---~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1310 GKADLLVCNCALATLG---DPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp --CCEEEEECC-----------------------CCEEEEEEC
T ss_pred CceeEEEEcccccccc---cHHHHHHHHHHhcCCCcEEEEEec
Confidence 8899999999996543 466799999999999999999764
No 297
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.90 E-value=0.14 Score=48.30 Aligned_cols=22 Identities=18% Similarity=0.298 Sum_probs=19.4
Q ss_pred HHHHHHHHHhhhcCCcEEEEEc
Q 020011 262 MKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 262 ~~~iL~EmdRVLRPGG~lii~d 283 (332)
+..+|.|+.|+|||||.+++.-
T Consensus 63 l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 63 FLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHCcCCcEEEEEE
Confidence 5679999999999999999853
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.70 E-value=0.17 Score=46.96 Aligned_cols=21 Identities=29% Similarity=0.396 Sum_probs=18.0
Q ss_pred HHHHHHHHhhhcCCcEEEEEc
Q 020011 263 KFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 263 ~~iL~EmdRVLRPGG~lii~d 283 (332)
..++.|+.|+|||||.+++.-
T Consensus 77 ~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 77 DRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEE
Confidence 457889999999999998763
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=91.91 E-value=0.19 Score=46.80 Aligned_cols=109 Identities=16% Similarity=0.086 Sum_probs=55.7
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHH---HHHhcCc-ccccccccccCCCCCCccceeEehhhhccc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLA---VVYDRGL-IGTYHDWCEAFSTYPRTYDLLHLDGLFTAE 256 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~---~a~eRGl-ig~~~d~~e~~~~yp~sFDlVh~s~vf~h~ 256 (332)
..+|||+||++|||..+.+...- +..|.++|. ...-. ....-|- +..+.+-.+-+.--|..||.|.|+-.=+.-
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~DtllcDIgeSs~ 157 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKCDTLLCDIGESSP 157 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCCSEEEECCCCCCS
T ss_pred CCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccccEEEEecCCCCC
Confidence 34899999999999997766532 235666666 11100 0001121 111111001011112669999998433221
Q ss_pred cccCCHH-----HHHHHHHhhhcCCcEEEEEcC----hhHHHHHHHH
Q 020011 257 SHRCDMK-----FVLLEMDRILRPNGYVIVRES----SYFIDAVATI 294 (332)
Q Consensus 257 ~~~c~~~-----~iL~EmdRVLRPGG~lii~d~----~~~~~~i~~i 294 (332)
+ ..++ .+|.=+.+.|++ |-|++-.- ++++++++.+
T Consensus 158 -~-~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~~l 201 (267)
T 3p8z_A 158 -S-PTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLERL 201 (267)
T ss_dssp -C-HHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHHH
T ss_pred -C-hhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHHHH
Confidence 1 1111 144444677888 78888652 2355565554
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=91.53 E-value=0.3 Score=44.35 Aligned_cols=22 Identities=9% Similarity=-0.019 Sum_probs=19.2
Q ss_pred HHHHHHHHHhhhcCCcEEEEEc
Q 020011 262 MKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 262 ~~~iL~EmdRVLRPGG~lii~d 283 (332)
+..+|.|+.|+|+|||.+++..
T Consensus 53 ~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 53 TYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCeEEEEEc
Confidence 4568999999999999999984
No 301
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=90.47 E-value=7.5 Score=36.62 Aligned_cols=64 Identities=17% Similarity=0.035 Sum_probs=37.3
Q ss_pred CeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccc-cccccccCCCCC-CccceeEeh
Q 020011 183 RNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGT-YHDWCEAFSTYP-RTYDLLHLD 250 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~-~~d~~e~~~~yp-~sFDlVh~s 250 (332)
.+|+|+-||.||++..+...|..+ +..+|. +..++..... .... ..|..+ +..-. ..+|+|+++
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~aG~~~--v~~~e~d~~a~~t~~~N-~~~~~~~Di~~-~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESCGAEC--VYSNEWDKYAQEVYEMN-FGEKPEGDITQ-VNEKTIPDHDILCAG 78 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCEE--EEEECCCHHHHHHHHHH-HSCCCBSCGGG-SCGGGSCCCSEEEEE
T ss_pred CcEEEECCCcCHHHHHHHHCCCeE--EEEEeCCHHHHHHHHHH-cCCCCcCCHHH-cCHhhCCCCCEEEEC
Confidence 579999999999999999988744 344555 4444433322 1100 122211 11111 358999985
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=90.17 E-value=1.3 Score=42.09 Aligned_cols=79 Identities=15% Similarity=0.078 Sum_probs=49.4
Q ss_pred CCCCC-CccceeEehhhhccccccCCH-HHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCcceeeeccccccc-cc
Q 020011 237 FSTYP-RTYDLLHLDGLFTAESHRCDM-KFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHKEDTEYGV-EK 313 (332)
Q Consensus 237 ~~~yp-~sFDlVh~s~vf~h~~~~c~~-~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~W~~~~~~~e~~~-~~ 313 (332)
+..++ ..||++.-.. |+--.++... +.++..|.|.|+|||.|+.-..... |+.-+..--.++... .|. .+
T Consensus 179 l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaag~---VRR~L~~aGF~V~k~---~G~g~K 251 (308)
T 3vyw_A 179 IKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSSLS---VRKSLLTLGFKVGSS---REIGRK 251 (308)
T ss_dssp GGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCCHH---HHHHHHHTTCEEEEE---ECC---
T ss_pred HhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCcHH---HHHHHHHCCCEEEec---CCCCCC
Confidence 44456 5799988763 5532222111 4799999999999999997666653 444455555555443 233 45
Q ss_pred ceEEEEEec
Q 020011 314 EKLLLCQKK 322 (332)
Q Consensus 314 e~~li~~K~ 322 (332)
-.++++.++
T Consensus 252 Reml~A~~~ 260 (308)
T 3vyw_A 252 RKGTVASLK 260 (308)
T ss_dssp CEEEEEESS
T ss_pred CceeEEecC
Confidence 568888764
No 303
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=90.04 E-value=0.81 Score=46.24 Aligned_cols=141 Identities=16% Similarity=0.068 Sum_probs=72.3
Q ss_pred CCCeEEEecCcchHHHHHHhc----CCC--------eEEEEeecCc-hhhHHHHHhc----CcccccccccccCCC----
Q 020011 181 KIRNVMDMNTLYGGFAAAVID----DPL--------WVMNVVSSYA-ANTLAVVYDR----GLIGTYHDWCEAFST---- 239 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~----~~v--------~vmnv~p~d~-~~~l~~a~eR----Glig~~~d~~e~~~~---- 239 (332)
...+|+|-.||+|+|.....+ ... ...++.+.+. +.+..+|.-. |+-..--. +...+.
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~-~~dtL~~~~~ 295 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRID-PENSLRFPLR 295 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEE-CSCTTCSCGG
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccccc-ccccccCchh
Confidence 345899999999999754432 211 0124667777 6666666432 32110000 111122
Q ss_pred --CC-CccceeEehhhhcc---------cc---ccCCHH-HHHHHHHhhhc-------CCcEEEEEcChhHH------HH
Q 020011 240 --YP-RTYDLLHLDGLFTA---------ES---HRCDMK-FVLLEMDRILR-------PNGYVIVRESSYFI------DA 290 (332)
Q Consensus 240 --yp-~sFDlVh~s~vf~h---------~~---~~c~~~-~iL~EmdRVLR-------PGG~lii~d~~~~~------~~ 290 (332)
.+ ..||+|.++==|.. ++ ...+.. .+++-+-+.|| |||.+.+.-|..++ .+
T Consensus 296 ~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~ 375 (530)
T 3ufb_A 296 EMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISAR 375 (530)
T ss_dssp GCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHH
T ss_pred hhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchHHH
Confidence 23 57999999744421 10 001111 24555666665 79999998877543 23
Q ss_pred HHHH-HhcCcceeeecccc----c-ccccceEEEEEec
Q 020011 291 VATI-AKGMKWSCHKEDTE----Y-GVEKEKLLLCQKK 322 (332)
Q Consensus 291 i~~i-~~~l~W~~~~~~~e----~-~~~~e~~li~~K~ 322 (332)
|++. .+.-.=...+.-+. . ...+--|||.+|.
T Consensus 376 iRk~Lle~~~l~aII~LP~~~F~~~tgi~t~Il~~~K~ 413 (530)
T 3ufb_A 376 IKEELLKNFNLHTIVRLPEGVFAPYTDIAGNLLFFDRS 413 (530)
T ss_dssp HHHHHHHHSEEEEEEECCTTTTTTTCCCCEEEEEEESS
T ss_pred HHHHHhhcCEEEEEEECCcccCcCCCCCcEEEEEEECC
Confidence 5443 44433333332111 1 1134458888875
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=88.84 E-value=0.36 Score=43.80 Aligned_cols=40 Identities=15% Similarity=-0.104 Sum_probs=33.2
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR 224 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR 224 (332)
...|||..||.|+++.+..+.+. .+.++|. +..+..+.+|
T Consensus 213 ~~~vlD~f~GsGtt~~~a~~~gr---~~ig~e~~~~~~~~~~~r 253 (260)
T 1g60_A 213 NDLVLDCFMGSGTTAIVAKKLGR---NFIGCDMNAEYVNQANFV 253 (260)
T ss_dssp TCEEEESSCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHcCC---eEEEEeCCHHHHHHHHHH
Confidence 46899999999999988888876 5567777 7788888876
No 305
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=88.40 E-value=0.35 Score=45.64 Aligned_cols=39 Identities=13% Similarity=0.032 Sum_probs=32.9
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHh
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYD 223 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~e 223 (332)
...++|.+||.||.+.+|++++. .|.++|. +++++.+.+
T Consensus 23 gg~~VD~T~G~GGHS~~il~~~g---~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILERGG---RVIGLDQDPEAVARAKG 62 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHHCCC---EEEEEeCCHHHHHHHHh
Confidence 45799999999999999999844 5788888 888887765
No 306
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.64 E-value=3.6 Score=38.39 Aligned_cols=123 Identities=15% Similarity=0.198 Sum_probs=68.5
Q ss_pred HHHHHHHhhcCCCCCCCCCeEEEecCcc-h-HHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCC-C
Q 020011 165 VRVKHYKKLLPALGTDKIRNVMDMNTLY-G-GFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFST-Y 240 (332)
Q Consensus 165 ~~v~~y~~~l~~l~~~~~r~VLD~GCG~-G-gfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~-y 240 (332)
-+++|+.+.+|.+..-...+|.=+|+|. | .++..|.+.|. ..+|...|. ++.++.+.+.|.+.... ..... .
T Consensus 16 ~~~~~~~~~~~~~~~~~~~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~dr~~~~~~~a~~~G~~~~~~---~~~~~~~ 91 (314)
T 3ggo_A 16 PRGSHMKNIIKILKSLSMQNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINPESISKAVDLGIIDEGT---TSIAKVE 91 (314)
T ss_dssp -------------CCCSCSEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHHHHTTSCSEEE---SCTTGGG
T ss_pred ccccCcCcCCchhhhcCCCEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHCCCcchhc---CCHHHHh
Confidence 3556676666544333457888899885 3 46778888775 124566777 67788888887653211 11111 1
Q ss_pred CCccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC--hhHHHHHHHHHhc
Q 020011 241 PRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES--SYFIDAVATIAKG 297 (332)
Q Consensus 241 p~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~--~~~~~~i~~i~~~ 297 (332)
-...|+|+.+ ++. ..+..++.++...|+||..++-... ..+++.+++....
T Consensus 92 ~~~aDvVila-----vp~-~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~ 144 (314)
T 3ggo_A 92 DFSPDFVMLS-----SPV-RTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK 144 (314)
T ss_dssp GGCCSEEEEC-----SCG-GGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG
T ss_pred hccCCEEEEe-----CCH-HHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC
Confidence 1456877765 332 3467789999999999887654332 2456777776543
No 307
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=87.20 E-value=1.4 Score=42.40 Aligned_cols=94 Identities=10% Similarity=0.202 Sum_probs=60.7
Q ss_pred CeEEEecCcchHHHHHHhcCCCeEEEEeecCc---hhhHHHHHhc-CcccccccccccCCCCCCccceeEehhhhcccc-
Q 020011 183 RNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA---ANTLAVVYDR-GLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAES- 257 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~---~~~l~~a~eR-Glig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~- 257 (332)
.+||.+|.++|.++-.|...+++.| .|. ...+....++ |+.+.-..+.....+.+..||+|..- ++
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~~~~~----~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----lpk 110 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHKPYSI----GDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIK-----VPK 110 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGCCEEE----ESCHHHHHHHHHHHHHTTCCGGGSEEEETTSCCCSSCSEEEEE-----CCS
T ss_pred CCEEEECCCCCHHHHhhccCCceEE----EhHHHHHHHHHHHHHHcCCCccceEecccccccccCCCEEEEE-----cCC
Confidence 5799999999999999987777443 233 3333333333 55432111223444566899987663 32
Q ss_pred ccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 258 HRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 258 ~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
........|.++...|+||+.+++....
T Consensus 111 ~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 111 TLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp CHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 2233456888889999999999887754
No 308
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=86.41 E-value=0.9 Score=43.29 Aligned_cols=100 Identities=7% Similarity=-0.008 Sum_probs=63.9
Q ss_pred CCCeEEEecCcchHHHHHHhcCCCeEEEEeecCchhhHHHHHhc----C--------------------------cc-cc
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDR----G--------------------------LI-GT 229 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~~~~l~~a~eR----G--------------------------li-g~ 229 (332)
..+.|+.+|||+.+.+-.|..... .+.+..+|.|+.++.-... + ++ ..
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 367899999999999999987311 1256677776665432221 1 01 11
Q ss_pred cc--ccccc-C--CCCCCccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 230 YH--DWCEA-F--STYPRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 230 ~~--d~~e~-~--~~yp~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
+. +|-+. + ..-++...++.+-.||.|++. .....++..+.+.+ |+|.+++-|
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~-~~~~~ll~~ia~~~-~~~~~v~~e 232 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHN-NESQLLINTIMSKF-SHGLWISYD 232 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCH-HHHHHHHHHHHHHC-SSEEEEEEE
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCH-HHHHHHHHHHHhhC-CCcEEEEEe
Confidence 11 23211 1 112267889999999999974 45667888888776 888887655
No 309
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.31 E-value=0.42 Score=45.19 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhhcCCcEEEEEcC
Q 020011 262 MKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 262 ~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
+..+|.|+.|+|+|||.+++...
T Consensus 85 ~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 85 AKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCeEEEEEcC
Confidence 45688999999999999998654
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=85.04 E-value=0.98 Score=42.56 Aligned_cols=91 Identities=11% Similarity=-0.046 Sum_probs=54.1
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c--cccccCCCC-CCccceeEehhhh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAFSTY-PRTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~~~y-p~sFDlVh~s~vf 253 (332)
..+||-+|||. |.+++.|++ .|.. .|..++. ++.++.+.+.|..-.+ . ++-+..... ++.||+|+-.
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~--- 265 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCGAS--IIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALES--- 265 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHTCS--EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEEC---
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC--eEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEEC---
Confidence 56899999875 666766665 3541 1233443 5677777776642211 1 111111111 1368887654
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. .-...+.+..+.|||||.+++..
T Consensus 266 --~----g~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 266 --T----GSPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp --S----CCHHHHHHHHHTEEEEEEEEECC
T ss_pred --C----CCHHHHHHHHHHHhcCCEEEEeC
Confidence 1 12357889999999999999854
No 311
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=84.62 E-value=2 Score=40.46 Aligned_cols=100 Identities=15% Similarity=0.114 Sum_probs=64.8
Q ss_pred CCCeEEEecCcchHHHHHHhcC-CCeEEEEeecCchhhHHHHHhc----Cc--ccccc--------cccccC--CCCC-C
Q 020011 181 KIRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYAANTLAVVYDR----GL--IGTYH--------DWCEAF--STYP-R 242 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~~~~l~~a~eR----Gl--ig~~~--------d~~e~~--~~yp-~ 242 (332)
.++.|+++|||.=+.+-.|... ++ .+.-+|.+..++..... |. .+.++ +|.+.+ ..|. .
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~~~~~---~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDWPTGT---TVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCCCTTC---EEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhccCCCCc---EEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 3678999999999998888743 34 34556665555432211 10 11111 222221 1233 4
Q ss_pred ccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 243 TYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 243 sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
.-=++.+..||+|+++ .....++..+...+-||+++++...
T Consensus 179 ~Pt~~i~Egvl~Yl~~-~~~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPA-TAQDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp SCEEEEECSCGGGSCH-HHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CCEEEEEechHhhCCH-HHHHHHHHHHHHhCCCCeEEEEEec
Confidence 4558888899999985 4677899999999999999998763
No 312
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=83.70 E-value=6.2 Score=37.30 Aligned_cols=42 Identities=14% Similarity=0.066 Sum_probs=29.2
Q ss_pred CeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc
Q 020011 183 RNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR 224 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR 224 (332)
.+|||+-||.||++..|.+.|.-.-.|..+|. +.+++.....
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N 45 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYN 45 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHh
Confidence 37999999999999999888741112456666 5566555443
No 313
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=82.03 E-value=9.9 Score=36.56 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=27.2
Q ss_pred CeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHH
Q 020011 183 RNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVV 221 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a 221 (332)
-+|+|+-||.||++..|.+.|..+ +..+|. +..++..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~--v~avE~d~~a~~t~ 40 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDV--KMAVEIDQHAINTH 40 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEE--EEEECSCHHHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHCCCcE--EEEEeCCHHHHHHH
Confidence 379999999999999998888643 345666 4454443
No 314
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=81.81 E-value=2.5 Score=40.76 Aligned_cols=101 Identities=17% Similarity=0.135 Sum_probs=61.8
Q ss_pred CeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCCCccceeEehhhhccccc-c
Q 020011 183 RNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESH-R 259 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~-~ 259 (332)
.+||++|-++|.++..|..+ .++. +. |. ++... ....|+..... .+..+.|..||+|..- ++. +
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~~~~~~--~~--~~~~~~~~-l~~~~~~~~~~---~~~~~~~~~~d~v~~~-----~Pk~k 113 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGRMAVER--LE--TSRAAFRC-LTASGLQARLA---LPWEAAAGAYDLVVLA-----LPAGR 113 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTTBEEEE--EE--CBHHHHHH-HHHTTCCCEEC---CGGGSCTTCEEEEEEE-----CCGGG
T ss_pred CcEEEecCCCCccccccCCCCceEE--Ee--CcHHHHHH-HHHcCCCcccc---CCccCCcCCCCEEEEE-----CCcch
Confidence 58999999999887777633 3322 22 23 33333 33345543211 1122345889987643 442 2
Q ss_pred C--CHHHHHHHHHhhhcCCcEEEEEc-ChhHHHHHHHHHh
Q 020011 260 C--DMKFVLLEMDRILRPNGYVIVRE-SSYFIDAVATIAK 296 (332)
Q Consensus 260 c--~~~~iL~EmdRVLRPGG~lii~d-~~~~~~~i~~i~~ 296 (332)
. ..+..|.++.+.|+|||.+++.. ..+-++++.+.++
T Consensus 114 ~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~g~~~~~~~~~ 153 (381)
T 3dmg_A 114 GTAYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEAR 153 (381)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEGGGTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEEEccHHHHHHHHHHHH
Confidence 1 35689999999999999998877 4444566655544
No 315
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=81.16 E-value=2.2 Score=36.11 Aligned_cols=91 Identities=11% Similarity=0.016 Sum_probs=52.1
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccc--ccc--ccccCCC-CC-CccceeEehh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGT--YHD--WCEAFST-YP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~d--~~e~~~~-yp-~sFDlVh~s~ 251 (332)
.++||-.|+ |.|..++.++. .|.. |..++. ++.++.+.+.|..-. +.+ ..+.+.. .. +.+|+|+.+.
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~---V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 115 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGAR---IYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSL 115 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCE---EEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCE---EEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECC
Confidence 578999995 55655555543 4653 333344 555666665553211 110 0011110 12 4689887552
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
. ...+.+..+.|||||.+++....
T Consensus 116 -----g-----~~~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 116 -----A-----GEAIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp -----C-----THHHHHHHHTEEEEEEEEECSCG
T ss_pred -----c-----hHHHHHHHHHhccCCEEEEEcCC
Confidence 1 24788899999999999987543
No 316
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=80.82 E-value=1.5 Score=40.95 Aligned_cols=86 Identities=14% Similarity=-0.002 Sum_probs=53.5
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCCCccceeEehhhhccccc
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESH 258 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~ 258 (332)
..+||-+|+|. |.+++.|++ .|.. |..++. ++.++.+.+.|.-..+.+ ...+.+.||+|.-. ...
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~v~~~----~~~~~~~~D~vid~-----~g~ 244 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGAE---VSVFARNEHKKQDALSMGVKHFYTD----PKQCKEELDFIIST-----IPT 244 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCE---EEEECSSSTTHHHHHHTTCSEEESS----GGGCCSCEEEEEEC-----CCS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCe---EEEEeCCHHHHHHHHhcCCCeecCC----HHHHhcCCCEEEEC-----CCc
Confidence 56899999875 566666655 4653 444454 667778877765332211 11122478887743 111
Q ss_pred cCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 259 RCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 259 ~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. ..+.+..+.|||||.+++..
T Consensus 245 ~----~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 245 H----YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp C----CCHHHHHTTEEEEEEEEECC
T ss_pred H----HHHHHHHHHHhcCCEEEEEC
Confidence 1 25777889999999999864
No 317
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=80.34 E-value=4.1 Score=38.07 Aligned_cols=91 Identities=11% Similarity=-0.058 Sum_probs=53.8
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c-----cccccCCC-CCCccceeEeh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H-----DWCEAFST-YPRTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~-----d~~e~~~~-yp~sFDlVh~s 250 (332)
..+||-+|||. |.+++.|++ .|.. .|..++. ++.++++.+-|..-.+ . ++.+.+.. .++.||+|+-.
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~ 249 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAA--QVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC 249 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEEC
Confidence 46899999874 666666665 4541 2333443 5667778777753211 1 11111100 11468887654
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. .-...+.+.-+.|||||.+++..
T Consensus 250 -----~----g~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 250 -----T----GAEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp -----S----CCHHHHHHHHHHSCTTCEEEECS
T ss_pred -----C----CChHHHHHHHHHhcCCCEEEEEe
Confidence 1 12357888899999999999754
No 318
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=80.21 E-value=0.54 Score=39.04 Aligned_cols=21 Identities=52% Similarity=0.841 Sum_probs=17.4
Q ss_pred EEEEEeeceecCCceEEeccC
Q 020011 10 IYLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 10 ~~l~E~dRvLRpgGy~v~s~p 30 (332)
.+|-|+-|+|||||+|+++.|
T Consensus 82 ~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 82 EILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHCCCCEEEEEEcc
Confidence 346678899999999999755
No 319
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=79.85 E-value=2.5 Score=43.18 Aligned_cols=44 Identities=25% Similarity=0.331 Sum_probs=30.4
Q ss_pred CccceeEehhhhccccccCCH-HHHHHHHHhhhcCCcEEEEEcChh
Q 020011 242 RTYDLLHLDGLFTAESHRCDM-KFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 242 ~sFDlVh~s~vf~h~~~~c~~-~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
..||+++-.. |+--.++... ..++.+|.|++||||.+.......
T Consensus 178 ~~~d~~~~D~-f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~~ 222 (676)
T 3ps9_A 178 QKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAG 222 (676)
T ss_dssp TCEEEEEECC-SCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCCH
T ss_pred CcccEEEECC-CCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCcH
Confidence 5689888754 4432222111 479999999999999998766554
No 320
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=79.84 E-value=1.8 Score=40.18 Aligned_cols=90 Identities=11% Similarity=-0.070 Sum_probs=54.7
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c--cccccCCCCCCccceeEehhhhc
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAFSTYPRTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~~~yp~sFDlVh~s~vf~ 254 (332)
..+||-.|||. |.++..|++ .|.. |..++. ++.++.+.+.|.-..+ . ++.+.+..-.+.+|+|.-..
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~--- 240 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAMGLR---VAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTA--- 240 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCE---EEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESS---
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeC---
Confidence 57899999874 777777766 4663 444554 6677788777642221 1 11111000012577765431
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.-...+.+.-+.|||||.+++..
T Consensus 241 ------g~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 241 ------VSPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp ------CCHHHHHHHHHHEEEEEEEEECS
T ss_pred ------CCHHHHHHHHHHhccCCEEEEeC
Confidence 12468889999999999999864
No 321
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=78.90 E-value=4.4 Score=38.16 Aligned_cols=91 Identities=11% Similarity=0.136 Sum_probs=56.8
Q ss_pred CCCeEEEec-C-cchHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhcCccccc---ccccccCCCCC-CccceeEehh
Q 020011 181 KIRNVMDMN-T-LYGGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDRGLIGTY---HDWCEAFSTYP-RTYDLLHLDG 251 (332)
Q Consensus 181 ~~r~VLD~G-C-G~Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eRGlig~~---~d~~e~~~~yp-~sFDlVh~s~ 251 (332)
...+||=.| + |.|.++..|++. +. .|..++. ++.++.+.+-|.--.+ .++.+.+.... +.||+|.-.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~---~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~- 246 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDL---TVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFST- 246 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCS---EEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEEC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCC---EEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEEC-
Confidence 356788887 3 457777777763 55 3455555 6677788776642111 11212211223 678987754
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
..-...+.+.-+.|||||.+++..
T Consensus 247 --------~g~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 247 --------THTDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp --------SCHHHHHHHHHHHSCTTCEEEECS
T ss_pred --------CCchhhHHHHHHHhcCCCEEEEEC
Confidence 123457889999999999999864
No 322
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=78.90 E-value=3.4 Score=38.05 Aligned_cols=89 Identities=16% Similarity=0.134 Sum_probs=51.2
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccc--ccc---cccccCCC-CCCccceeEehh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIG--TYH---DWCEAFST-YPRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig--~~~---d~~e~~~~-yp~sFDlVh~s~ 251 (332)
.++||-.|| |.|.+++.++. .|.. |..++. ++.++.+.+.|..- .+. ++.+.+.. ..+.+|+++.+.
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~---V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 222 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCK---VVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNV 222 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 578999998 66666655554 5663 333443 55666665545311 111 11011111 124688877652
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
- ...+.+.-+.|||||.+++..
T Consensus 223 g----------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 223 G----------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp C----------HHHHHHHHTTEEEEEEEEECC
T ss_pred C----------hHHHHHHHHHHhcCCEEEEEe
Confidence 1 135788889999999998754
No 323
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=77.43 E-value=3.8 Score=42.07 Aligned_cols=44 Identities=23% Similarity=0.291 Sum_probs=29.1
Q ss_pred CccceeEehhhhccccccCCH-HHHHHHHHhhhcCCcEEEEEcChh
Q 020011 242 RTYDLLHLDGLFTAESHRCDM-KFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 242 ~sFDlVh~s~vf~h~~~~c~~-~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
..||.++-.. |+--.+.... ..++.+|.|++||||.+.......
T Consensus 170 ~~~da~flD~-f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~~ 214 (689)
T 3pvc_A 170 NQVDAWFLDG-FAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAAG 214 (689)
T ss_dssp TCEEEEEECS-SCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCCH
T ss_pred CceeEEEECC-CCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCcH
Confidence 5688887754 3311111111 579999999999999988766554
No 324
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=76.96 E-value=10 Score=35.88 Aligned_cols=91 Identities=11% Similarity=0.059 Sum_probs=47.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCC--eEEEE-eecCc-hhhHHHHHhc-Cccccccccccc-CCCCC-CccceeEeh---h
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPL--WVMNV-VSSYA-ANTLAVVYDR-GLIGTYHDWCEA-FSTYP-RTYDLLHLD---G 251 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v--~vmnv-~p~d~-~~~l~~a~eR-Glig~~~d~~e~-~~~yp-~sFDlVh~s---~ 251 (332)
.-+|+|+-||.||+...|.+.|+ .+ + ..+|. +..++..... +-.-...|..+. ...+| ..+|+++++ +
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~--v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ 87 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININA--TFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSPPCQ 87 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCE--EEEEECCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECCCCT
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceE--EEEEEECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecCCcc
Confidence 34799999999999999998884 22 3 35555 4343332221 111111122111 01133 368999874 3
Q ss_pred hh--cccccc---CC-HHHHHHHHHh-hhc
Q 020011 252 LF--TAESHR---CD-MKFVLLEMDR-ILR 274 (332)
Q Consensus 252 vf--~h~~~~---c~-~~~iL~EmdR-VLR 274 (332)
-| |....+ .+ ...++.|+-| +++
T Consensus 88 ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~ 117 (327)
T 3qv2_A 88 PYNNSIMSKHKDINDPRAKSVLHLYRDILP 117 (327)
T ss_dssp TCSHHHHTTTCTTTCGGGHHHHHHHHTTGG
T ss_pred CcccccCCCCCCCccccchhHHHHHHHHHH
Confidence 34 322111 11 1257888888 664
No 325
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=76.85 E-value=5.8 Score=36.69 Aligned_cols=90 Identities=12% Similarity=-0.056 Sum_probs=51.5
Q ss_pred CCCeEEEecCc--chHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c--cccccCC-CCC-CccceeEeh
Q 020011 181 KIRNVMDMNTL--YGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAFS-TYP-RTYDLLHLD 250 (332)
Q Consensus 181 ~~r~VLD~GCG--~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~~-~yp-~sFDlVh~s 250 (332)
...+||=.||| .|.+++.+++ .|..+ ..++. ++.++.+.+-|..-.+ . ++.+.+. ... +.||+|+-.
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~V---i~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 220 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRL---IAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDS 220 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEE---EEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEE---EEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence 35789999986 6777766665 46643 33333 4566677665542111 1 1111111 122 579988754
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
- .- ..+.+.-+.|||||.+++..
T Consensus 221 ~---------g~-~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 221 I---------GG-PDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp S---------CH-HHHHHHHHTEEEEEEEEECC
T ss_pred C---------CC-hhHHHHHHHhcCCCEEEEEe
Confidence 1 11 23345558999999999864
No 326
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=76.44 E-value=32 Score=31.33 Aligned_cols=24 Identities=13% Similarity=0.282 Sum_probs=21.1
Q ss_pred eEEEecCcchHHHHHHhcCCCeEE
Q 020011 184 NVMDMNTLYGGFAAAVIDDPLWVM 207 (332)
Q Consensus 184 ~VLD~GCG~Ggfaa~L~~~~v~vm 207 (332)
+|+|+=||.|||...|.+.|..++
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v 25 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRII 25 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEE
T ss_pred eEEEeCcCccHHHHHHHHCCCEEE
Confidence 699999999999999999887543
No 327
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=76.07 E-value=5.4 Score=36.78 Aligned_cols=89 Identities=16% Similarity=0.163 Sum_probs=52.4
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHH-hcCcccc--cc---cccccCCC-CCCccceeEeh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVY-DRGLIGT--YH---DWCEAFST-YPRTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~-eRGlig~--~~---d~~e~~~~-yp~sFDlVh~s 250 (332)
..+||-.|| |.|.+++.++. .|.. |..++. ++.++.+. +-|.... +. ++.+.+.. .++.+|+|+.+
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~---V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMGCY---VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFEN 232 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence 578999998 67777666655 5653 344444 55666666 3453211 11 11010000 12468887755
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
- .. ..+.+.-+.|+|||.+++..
T Consensus 233 ~---------g~-~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 233 V---------GG-KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp S---------CH-HHHHHHHTTEEEEEEEEECC
T ss_pred C---------CH-HHHHHHHHHHhcCCEEEEEc
Confidence 1 11 47888899999999998753
No 328
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=76.07 E-value=4.6 Score=37.56 Aligned_cols=90 Identities=12% Similarity=-0.020 Sum_probs=53.1
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c---cccccCCC-C----CCccceeE
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H---DWCEAFST-Y----PRTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~---d~~e~~~~-y----p~sFDlVh 248 (332)
..+||-.|||. |.+++.|++ .|.. |..++. ++.++.+.+-|....+ . ++.+.... . .+.||+|+
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vi 245 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGAF---VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTI 245 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEE
Confidence 46899999864 556666655 4653 344444 6677777776653211 1 11111000 1 24588876
Q ss_pred ehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 249 LDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 249 ~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
-.- .-...+.+.-+.|||||.+++..
T Consensus 246 d~~---------g~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 246 DCS---------GNEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp ECS---------CCHHHHHHHHHHSCTTCEEEECS
T ss_pred ECC---------CCHHHHHHHHHHHhcCCEEEEEe
Confidence 541 11347888899999999999754
No 329
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=75.91 E-value=2 Score=39.97 Aligned_cols=89 Identities=12% Similarity=-0.048 Sum_probs=52.0
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccccccc------ccCCC-CCCccceeEeh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWC------EAFST-YPRTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~------e~~~~-yp~sFDlVh~s 250 (332)
..+||-+|+ |.|.+++.++. .|..+ ..++. ++.++.+.+.|..-.+ |.. +.+.. ..+.+|+|+.+
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V---~~~~~~~~~~~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~~~D~vi~~ 245 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRV---LGIDGGEGKEELFRSIGGEVFI-DFTKEKDIVGAVLKATDGGAHGVINV 245 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEE---EEEECSTTHHHHHHHTTCCEEE-ETTTCSCHHHHHHHHHTSCEEEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcE---EEEcCCHHHHHHHHHcCCceEE-ecCccHhHHHHHHHHhCCCCCEEEEC
Confidence 578999999 56766666654 56643 33333 4455666665532111 111 00000 01258887765
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. .....+.+.-+.|+|||.+++..
T Consensus 246 ~---------g~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 246 S---------VSEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp S---------SCHHHHHHHTTSEEEEEEEEECC
T ss_pred C---------CcHHHHHHHHHHHhcCCEEEEEe
Confidence 2 12357889999999999998754
No 330
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=75.03 E-value=3.5 Score=38.27 Aligned_cols=89 Identities=9% Similarity=-0.005 Sum_probs=54.0
Q ss_pred CCeEEEecCcc-hHHHHHHhc-C--CCeEEEEeecCc-hhhHHHHHhcCcccc--ccc---ccccCCCCCCccceeEehh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-D--PLWVMNVVSSYA-ANTLAVVYDRGLIGT--YHD---WCEAFSTYPRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~--~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~d---~~e~~~~yp~sFDlVh~s~ 251 (332)
..+||-+|+|. |.++..|++ . |. .|..++. ++.++.+.+.|..-. +++ +.+.+ +-.+.||+|+-.-
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga---~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~-~~g~g~D~vid~~ 246 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNI---TIVGISRSKKHRDFALELGADYVSEMKDAESLINKL-TDGLGASIAIDLV 246 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTC---EEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHH-HTTCCEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCC---EEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHh-hcCCCccEEEECC
Confidence 57899999863 556666654 3 55 3445554 667777777664221 111 11111 1124789887551
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.-...+.+..+.|||||.+++..
T Consensus 247 ---------g~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 247 ---------GTEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp ---------CCHHHHHHHHHHEEEEEEEEECC
T ss_pred ---------CChHHHHHHHHHhhcCCEEEEeC
Confidence 11347888999999999998754
No 331
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=75.00 E-value=2.2 Score=36.23 Aligned_cols=56 Identities=25% Similarity=0.495 Sum_probs=34.6
Q ss_pred EEEEeeceecCCceEEeccCCccccccccCCCCCHHHHHHHHHHHHHHHHhcccceeeeecc-----eEEEeecCC
Q 020011 11 YLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDD-----IAVWQKLSD 81 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~cw~~~~~~~~-----~aiw~Kp~~ 81 (332)
+|-|+-|+|+|||+++++-+...+. +. +++.++.+..-++.+..... +.+++|+..
T Consensus 133 ~l~~~~~~L~~gG~l~i~~~~~~~~--------~~-------~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~~~ 193 (215)
T 2zfu_A 133 FLEEANRVLKPGGLLKVAEVSSRFE--------DV-------RTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTGP 193 (215)
T ss_dssp HHHHHHHHEEEEEEEEEEECGGGCS--------CH-------HHHHHHHHHTTEEEEEEECCSTTCEEEEEEECSS
T ss_pred HHHHHHHhCCCCeEEEEEEcCCCCC--------CH-------HHHHHHHHHCCCEEEEEecCCCeEEEEEEEecCc
Confidence 3456789999999999986543211 22 23556666666776654331 466666644
No 332
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=74.72 E-value=2.2 Score=36.03 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=33.4
Q ss_pred EEEeeceecCCceEEeccCCccccccccCCCCCHHHHHHHHHHHHHHHHhcccceeeeecc----eEEEeecCCC
Q 020011 12 LLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDD----IAVWQKLSDS 82 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~ppv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~cw~~~~~~~~----~aiw~Kp~~~ 82 (332)
|-++-|+|+|||+++++..... + ...+.++.+..-++.+..... ..+.++|.++
T Consensus 142 l~~~~~~L~~gG~l~~~~~~~~-------------~----~~~~~~~~~~~Gf~~~~~~~~~~w~~~~~~~~~~~ 199 (205)
T 3grz_A 142 IPQLDSHLNEDGQVIFSGIDYL-------------Q----LPKIEQALAENSFQIDLKMRAGRWIGLAISRKHEG 199 (205)
T ss_dssp GGGSGGGEEEEEEEEEEEEEGG-------------G----HHHHHHHHHHTTEEEEEEEEETTEEEEEEEECC--
T ss_pred HHHHHHhcCCCCEEEEEecCcc-------------c----HHHHHHHHHHcCCceEEeeccCCEEEEEEeccccc
Confidence 5678899999999999866431 1 234556666667776654332 4555555543
No 333
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=74.32 E-value=4.1 Score=38.48 Aligned_cols=91 Identities=16% Similarity=0.126 Sum_probs=54.6
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccccc----cccccCCC---C-CCccceeEeh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTYH----DWCEAFST---Y-PRTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~----d~~e~~~~---y-p~sFDlVh~s 250 (332)
..+||=.|+|. |.++..|++ .|.- .|+.++. ++.++.+.+-|....+. ++.+.... . ++.||+|+-.
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~ 260 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGAT--TVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIEC 260 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEEC
Confidence 46788889864 556666655 4551 2333444 66777887777532221 11111111 1 2478988754
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. .-...+.+.-+.|||||.+++..
T Consensus 261 -----~----G~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 261 -----A----GVAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp -----S----CCHHHHHHHHHHEEEEEEEEECS
T ss_pred -----C----CCHHHHHHHHHHhccCCEEEEEe
Confidence 1 11357889999999999999864
No 334
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=72.81 E-value=0.56 Score=42.04 Aligned_cols=18 Identities=28% Similarity=0.558 Sum_probs=14.9
Q ss_pred EEeeceecCCceEEeccC
Q 020011 13 LEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 13 ~E~dRvLRpgGy~v~s~p 30 (332)
-|+-|+|+|||+||+|+.
T Consensus 181 ~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 181 CNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEEEe
Confidence 355599999999999963
No 335
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=72.63 E-value=10 Score=37.08 Aligned_cols=21 Identities=14% Similarity=0.007 Sum_probs=19.0
Q ss_pred CeEEEecCcchHHHHHHhcCC
Q 020011 183 RNVMDMNTLYGGFAAAVIDDP 203 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~~ 203 (332)
-+|||+=||.||+...|.+.|
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG 31 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIA 31 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhC
Confidence 479999999999999998876
No 336
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=72.56 E-value=2.8 Score=39.61 Aligned_cols=87 Identities=13% Similarity=0.057 Sum_probs=51.7
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c--cccccCCCCCCccceeEehhhhc
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAFSTYPRTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~~~yp~sFDlVh~s~vf~ 254 (332)
..+||-+|+|. |.++..|++ .|.. |..++. ++.++.+.+-|..-.+ . ++-+.. .+.||+|+-.-
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~Ga~---Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~---~~g~Dvvid~~--- 265 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAMGAH---VVAFTTSEAKREAAKALGADEVVNSRNADEMAAH---LKSFDFILNTV--- 265 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTT---TTCEEEEEECC---
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHh---hcCCCEEEECC---
Confidence 56899999874 666666665 4653 333443 5667777766642211 1 111111 15789877541
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. ...+.+.-+.|||||.+++..
T Consensus 266 --g~----~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 266 --AA----PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp --SS----CCCHHHHHTTEEEEEEEEECC
T ss_pred --CC----HHHHHHHHHHhccCCEEEEec
Confidence 11 124677789999999998754
No 337
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=72.28 E-value=5.9 Score=37.06 Aligned_cols=91 Identities=9% Similarity=-0.132 Sum_probs=52.7
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccc--cc----cccccCCCC-CCccceeEehh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGT--YH----DWCEAFSTY-PRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~----d~~e~~~~y-p~sFDlVh~s~ 251 (332)
..+||-.|+|. |.+++.|++ .|.. .|..++. ++.++.+.+-|.... +. ++.+..... ++.||+|+-.
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~Ga~--~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~- 267 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAGAS--RIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFEC- 267 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEEC-
Confidence 56899999864 556666655 3541 2333443 566777777665221 11 111111111 1468887654
Q ss_pred hhccccccCCHHHHHHHHHhhhcCC-cEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPN-GYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPG-G~lii~d 283 (332)
. .-...+.+..+.|||| |.+++..
T Consensus 268 ----~----g~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 268 ----I----GNVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp ----S----CCHHHHHHHHHTBCTTTCEEEECS
T ss_pred ----C----CcHHHHHHHHHhhccCCcEEEEEe
Confidence 1 1135788999999999 9998754
No 338
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=72.01 E-value=0.58 Score=41.48 Aligned_cols=17 Identities=29% Similarity=0.585 Sum_probs=14.5
Q ss_pred EEEeeceecCCceEEec
Q 020011 12 LLEVHRILRPGGFWVLS 28 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s 28 (332)
|-|+-|||||||.|++.
T Consensus 153 ~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 153 KNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHTHHHHEEEEEEEEEC
T ss_pred hhhhhheeCCCCEEEEE
Confidence 34788999999999985
No 339
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=71.99 E-value=7.3 Score=35.54 Aligned_cols=86 Identities=17% Similarity=0.150 Sum_probs=51.8
Q ss_pred CCCeEEEecCc-chHHHHHHhc-CCCeEEEEeecCchhhHHHHHhcCcccccccccccCCCCCCccceeEehhhhccccc
Q 020011 181 KIRNVMDMNTL-YGGFAAAVID-DPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESH 258 (332)
Q Consensus 181 ~~r~VLD~GCG-~Ggfaa~L~~-~~v~vmnv~p~d~~~~l~~a~eRGlig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~ 258 (332)
...+||=.||| .|.++..|++ .|..|+.+. .++.++.+.+-|.-..+.| .+.. ++.||+|.-.- .
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~---~~~~~~~~~~lGa~~v~~d-~~~v---~~g~Dvv~d~~-----g- 208 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS---ASLSQALAAKRGVRHLYRE-PSQV---TQKYFAIFDAV-----N- 208 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC---SSCCHHHHHHHTEEEEESS-GGGC---CSCEEEEECC--------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE---ChhhHHHHHHcCCCEEEcC-HHHh---CCCccEEEECC-----C-
Confidence 35789999985 3566666655 366444333 4456677777675333333 2322 67899887431 1
Q ss_pred cCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 259 RCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 259 ~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
...+.+.-+.|||||.+++..
T Consensus 209 ----~~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 ----SQNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ---------TTGGGEEEEEEEEEEC
T ss_pred ----chhHHHHHHHhcCCCEEEEEe
Confidence 123366789999999998864
No 340
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=71.94 E-value=9.7 Score=36.03 Aligned_cols=37 Identities=14% Similarity=0.087 Sum_probs=25.6
Q ss_pred CeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHH
Q 020011 183 RNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLA 219 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~ 219 (332)
-+|+|+-||.||+...|.+.|.-.--+..+|. +..++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ 41 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANS 41 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHH
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHH
Confidence 47999999999999999887751112345566 44443
No 341
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=71.62 E-value=1.8 Score=41.18 Aligned_cols=97 Identities=18% Similarity=0.032 Sum_probs=55.0
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCC-eEEEEeecCc-hhhHHHHHhcCcccccccc------cccCCC-CC-CccceeEe
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPL-WVMNVVSSYA-ANTLAVVYDRGLIGTYHDW------CEAFST-YP-RTYDLLHL 249 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v-~vmnv~p~d~-~~~l~~a~eRGlig~~~d~------~e~~~~-yp-~sFDlVh~ 249 (332)
..+||-+|||. |.++..|++ .|. .| ..++. ++.++++.+.|.. .+ +. .+.+.. .+ +.||+|+-
T Consensus 186 g~~VlV~GaG~vG~~aiqlak~~Ga~~V---i~~~~~~~~~~~a~~lGa~-~i-~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 186 GSHVYIAGAGPVGRCAAAGARLLGAACV---IVGDQNPERLKLLSDAGFE-TI-DLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEE---EEEESCHHHHHHHHTTTCE-EE-ETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEE---EEEcCCHHHHHHHHHcCCc-EE-cCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 56899999976 777777766 354 33 34444 6677888777752 11 11 111100 12 46898875
Q ss_pred hhhhccccc-----cCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 250 DGLFTAESH-----RCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 250 s~vf~h~~~-----~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.---..... .......+.+..+.|||||.+++..
T Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 261 AVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp CSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 421110000 0001247889999999999998643
No 342
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=71.03 E-value=7.9 Score=35.31 Aligned_cols=86 Identities=15% Similarity=0.051 Sum_probs=52.0
Q ss_pred EEEecC--cchHHHHHHhc-CCCeEEEEeecCchhhHHHHHhcCccc--ccccccccCCCCC-CccceeEehhhhccccc
Q 020011 185 VMDMNT--LYGGFAAAVID-DPLWVMNVVSSYAANTLAVVYDRGLIG--TYHDWCEAFSTYP-RTYDLLHLDGLFTAESH 258 (332)
Q Consensus 185 VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~~~~l~~a~eRGlig--~~~d~~e~~~~yp-~sFDlVh~s~vf~h~~~ 258 (332)
||=.|| |.|.++..|++ .|..|+.+... ++.++.+.+-|.-. .+++.-. ..... +.||+|.-. ..
T Consensus 150 VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~--~~~~~~~~~lGa~~vi~~~~~~~-~~~~~~~~~d~v~d~-----~g- 220 (324)
T 3nx4_A 150 VVVTGASGGVGSTAVALLHKLGYQVAAVSGR--ESTHGYLKSLGANRILSRDEFAE-SRPLEKQLWAGAIDT-----VG- 220 (324)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCCEEEEESC--GGGHHHHHHHTCSEEEEGGGSSC-CCSSCCCCEEEEEES-----SC-
T ss_pred EEEECCCcHHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHhcCCCEEEecCCHHH-HHhhcCCCccEEEEC-----CC-
Confidence 898887 66777777765 46644333322 56677777766421 2222111 11122 578876543 11
Q ss_pred cCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 259 RCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 259 ~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
...+.+.-+.|+|||.+++..
T Consensus 221 ----~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 221 ----DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp ----HHHHHHHHHTEEEEEEEEECC
T ss_pred ----cHHHHHHHHHHhcCCEEEEEe
Confidence 238889999999999999864
No 343
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=70.91 E-value=11 Score=34.75 Aligned_cols=90 Identities=14% Similarity=-0.013 Sum_probs=52.4
Q ss_pred CCeEEEecCc-chHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c--cccccCCCCCCccceeEehhhhc
Q 020011 182 IRNVMDMNTL-YGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAFSTYPRTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG-~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~~~yp~sFDlVh~s~vf~ 254 (332)
..+||-+|+| .|.+++.+++ .|. .|..++. ++.++.+.+-|....+ . ++.+.+....+.||+|.-.-
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga---~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~--- 238 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGL---NVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTA--- 238 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESS---
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECC---
Confidence 4689999986 4666666654 465 3455554 6677777765642111 1 00000000003588776541
Q ss_pred cccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 255 AESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 255 h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.....+.+.-+.|||||.+++..
T Consensus 239 ------g~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 239 ------VSKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp ------CCHHHHHHHHHHEEEEEEEEECC
T ss_pred ------CCHHHHHHHHHHhhcCCEEEEec
Confidence 11357888899999999998753
No 344
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=70.77 E-value=9.7 Score=35.63 Aligned_cols=91 Identities=8% Similarity=-0.085 Sum_probs=52.8
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccc--ccc----ccccCCCC-CCccceeEehh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGT--YHD----WCEAFSTY-PRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~d----~~e~~~~y-p~sFDlVh~s~ 251 (332)
..+||-+|+|. |.+++.|++ .|.- .|..++. ++.++.+.+-|..-. +.+ +.+..... .+.||+|+-.
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga~--~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~- 268 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGAA--RIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV- 268 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEEC-
Confidence 56899999864 556666655 4541 2333443 667777777665221 111 11111111 1468887654
Q ss_pred hhccccccCCHHHHHHHHHhhhcCC-cEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPN-GYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPG-G~lii~d 283 (332)
. .-...+.+.-+.|||| |.+++..
T Consensus 269 ----~----g~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 269 ----I----GRLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp ----S----CCHHHHHHHHHHBCTTTCEEEECS
T ss_pred ----C----CCHHHHHHHHHHhhcCCcEEEEec
Confidence 1 1135788899999999 9998754
No 345
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=70.70 E-value=6 Score=38.04 Aligned_cols=49 Identities=12% Similarity=0.072 Sum_probs=31.4
Q ss_pred ccccccchhhHHHHHHHHHhhcCCCCCCCCCeEEEecCcchHHHHHHhcC
Q 020011 153 ASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDD 202 (332)
Q Consensus 153 ~~~F~~d~~~W~~~v~~y~~~l~~l~~~~~r~VLD~GCG~Ggfaa~L~~~ 202 (332)
...|-.|...=.+.+ ....+-+..+.+...+||++|.|.|.++..|+++
T Consensus 31 GQnFL~d~~i~~~Iv-~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~ 79 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIF-DKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNK 79 (353)
T ss_dssp GCCCBCCHHHHHHHH-HHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHH
T ss_pred CcCccCCHHHHHHHH-HhccCCcccCcCCCCEEEEECCCCCHHHHHHHhh
Confidence 455777665544444 3433222222223578999999999999999975
No 346
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=70.44 E-value=5.7 Score=38.44 Aligned_cols=39 Identities=13% Similarity=0.044 Sum_probs=31.4
Q ss_pred CCeEEEecCcchHHHHHHhcC-CCeEEEEeecCc-hhhHHHH
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD-PLWVMNVVSSYA-ANTLAVV 221 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a 221 (332)
...++|..||.||-+.+|+++ +--. .|.++|. +++++.+
T Consensus 58 ggiyVD~TlG~GGHS~~iL~~lg~~G-rVig~D~Dp~Al~~A 98 (347)
T 3tka_A 58 DGIYIDGTFGRGGHSRLILSQLGEEG-RLLAIDRDPQAIAVA 98 (347)
T ss_dssp TCEEEESCCTTSHHHHHHHTTCCTTC-EEEEEESCHHHHHHH
T ss_pred CCEEEEeCcCCCHHHHHHHHhCCCCC-EEEEEECCHHHHHHH
Confidence 567999999999999999886 2211 4788999 8888887
No 347
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=70.24 E-value=2.8 Score=34.31 Aligned_cols=22 Identities=27% Similarity=0.221 Sum_probs=17.1
Q ss_pred EEEEeeceecCCceEEeccCCc
Q 020011 11 YLLEVHRILRPGGFWVLSGPPV 32 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv 32 (332)
+|-++-|+|+|||+++++-+..
T Consensus 129 ~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 129 ALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp HHHHHHHHEEEEEEEEEEEETT
T ss_pred HHHHHHHHhCCCCEEEEEeCCC
Confidence 3456679999999999987653
No 348
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=70.18 E-value=4.6 Score=37.73 Aligned_cols=89 Identities=11% Similarity=0.046 Sum_probs=51.2
Q ss_pred CeEEEecCcc-hHHH-HHHh-c-CCCeEEEEeecCc-hh---hHHHHHhcCccc-cccc--ccccCCCCCCccceeEehh
Q 020011 183 RNVMDMNTLY-GGFA-AAVI-D-DPLWVMNVVSSYA-AN---TLAVVYDRGLIG-TYHD--WCEAFSTYPRTYDLLHLDG 251 (332)
Q Consensus 183 r~VLD~GCG~-Ggfa-a~L~-~-~~v~vmnv~p~d~-~~---~l~~a~eRGlig-~~~d--~~e~~~~yp~sFDlVh~s~ 251 (332)
.+||=+|+|. |.++ ..|+ + .|.. .|..++. ++ .++.+.+.|.-- .+++ +.+ .....+.||+|+-.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~--~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~gg~Dvvid~- 249 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYE--NLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED-VPDVYEQMDFIYEA- 249 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCC--EEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSCCEEEEEEC-
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCc--EEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHH-HHHhCCCCCEEEEC-
Confidence 6899999853 5566 6666 4 3553 1333333 44 677787766421 2221 111 00001268877643
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. -...+.+.-+.|||||.+++..
T Consensus 250 ----~g----~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 250 ----TG----FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp ----SC----CHHHHHHHHHHEEEEEEEEECC
T ss_pred ----CC----ChHHHHHHHHHHhcCCEEEEEe
Confidence 11 1347889999999999998754
No 349
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=69.52 E-value=7.9 Score=36.26 Aligned_cols=91 Identities=8% Similarity=-0.112 Sum_probs=53.2
Q ss_pred CCeEEEecCcc-hHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhcCcccc--cc----cccccCCCC-CCccceeEehh
Q 020011 182 IRNVMDMNTLY-GGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDRGLIGT--YH----DWCEAFSTY-PRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~----d~~e~~~~y-p~sFDlVh~s~ 251 (332)
..+||=+|||. |.+++.|++. |.. .|..++. ++.++.+.+-|.-.. +. ++.+..... ++.||+|+-.
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~- 268 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGAS--RIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC- 268 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC--eEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEEC-
Confidence 56899999864 5566666553 541 1333443 567777877675221 11 111111111 1468887754
Q ss_pred hhccccccCCHHHHHHHHHhhhcCC-cEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPN-GYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPG-G~lii~d 283 (332)
. .-...+.+.-+.|||| |.+++..
T Consensus 269 ----~----g~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 269 ----A----GRIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp ----S----CCHHHHHHHHHTBCTTTCEEEECC
T ss_pred ----C----CCHHHHHHHHHHHhcCCCEEEEEc
Confidence 1 1135788899999999 9998754
No 350
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=69.34 E-value=3.6 Score=38.62 Aligned_cols=89 Identities=17% Similarity=0.094 Sum_probs=52.9
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccccc----cccccCCC-CC-CccceeEehhh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTYH----DWCEAFST-YP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~----d~~e~~~~-yp-~sFDlVh~s~v 252 (332)
..+||=+|+|. |.+++.|++ .|.. |..++. ++.++.+.+-|..-.+. ++-+.... .+ +.||+|.-.-
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~- 265 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKATGAE---VIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIA- 265 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHTTCE---EEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEET-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECC-
Confidence 56899999875 555555554 4663 344444 66777777767532221 11111111 12 4799887542
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. ...+.+.-+.|||||.+++..
T Consensus 266 ----g-----~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 266 ----G-----GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp ----T-----SSCHHHHHHHEEEEEEEEEEC
T ss_pred ----C-----hHHHHHHHHHhhcCCEEEEEe
Confidence 1 135677888999999999864
No 351
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=69.04 E-value=9 Score=35.88 Aligned_cols=91 Identities=9% Similarity=-0.115 Sum_probs=52.7
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccc--ccc----ccccCCCC-CCccceeEehh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGT--YHD----WCEAFSTY-PRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~d----~~e~~~~y-p~sFDlVh~s~ 251 (332)
..+||-.|+|. |.++..|++ .|.- .|..++. ++.++.+.+-|.--. +.+ +.+.+... .+.||+|+-.
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga~--~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~- 269 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGAK--RIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC- 269 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC--EEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEEC-
Confidence 56899999864 556666655 4541 2333443 667777777665221 111 11111111 1368887654
Q ss_pred hhccccccCCHHHHHHHHHhhhcCC-cEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPN-GYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPG-G~lii~d 283 (332)
. .-...+.+.-+.|||| |.+++..
T Consensus 270 ----~----g~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 270 ----V----GNVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp ----S----CCHHHHHHHHHTBCTTTCEEEECS
T ss_pred ----C----CCHHHHHHHHHHhhcCCcEEEEEc
Confidence 1 1135788999999999 9998754
No 352
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=68.79 E-value=3.3 Score=38.40 Aligned_cols=90 Identities=9% Similarity=0.038 Sum_probs=54.5
Q ss_pred CCeEEEecCcc-hHHHHHHhcC--CCeEEEEeecCc-hhhHHHHHhcCccccc--c-cccccCCCC-C-CccceeEehhh
Q 020011 182 IRNVMDMNTLY-GGFAAAVIDD--PLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H-DWCEAFSTY-P-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~~--~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~-d~~e~~~~y-p-~sFDlVh~s~v 252 (332)
..+||=.|+|. |.++..|++. +. .|..++. ++.++.+.+-|....+ . ++.+..... . +.||+|.-.
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~~g~~---~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~-- 246 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRAVSAA---RVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDF-- 246 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCC---EEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEES--
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC---EEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEEC--
Confidence 56788889865 6666666653 44 3444544 6677888877753222 1 111111111 2 468877654
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. -...+.+..+.|+|||.+++..
T Consensus 247 ---~G----~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 247 ---VG----AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp ---SC----CHHHHHHHHHHEEEEEEEEECS
T ss_pred ---CC----CHHHHHHHHHHHhcCCEEEEEC
Confidence 11 1358889999999999999864
No 353
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=68.77 E-value=4.6 Score=37.17 Aligned_cols=89 Identities=13% Similarity=0.127 Sum_probs=53.5
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHH-HhcCccccc--c--cccccCCC-CCCccceeEehh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVV-YDRGLIGTY--H--DWCEAFST-YPRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a-~eRGlig~~--~--d~~e~~~~-yp~sFDlVh~s~ 251 (332)
..+||-.|| |.|.+++.++. .|.. |..++. ++.++.+ .+-|....+ . ++.+.... .++.||+|..+-
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 226 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCR---VVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNV 226 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECC
Confidence 578999998 66777766654 5663 344444 5666666 555542111 1 11111100 135689887641
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. ...+.+.-+.|||||.+++..
T Consensus 227 ---------g-~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 227 ---------G-GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp ---------C-HHHHHHHHTTEEEEEEEEECC
T ss_pred ---------C-cchHHHHHHHHhhCCEEEEEe
Confidence 1 247888899999999999854
No 354
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=68.44 E-value=2.4 Score=36.01 Aligned_cols=73 Identities=12% Similarity=0.228 Sum_probs=39.7
Q ss_pred EEEEeeceecCCceEEeccCCccccccc---------cCCCCCHHHHHH----HHHHHHHHHHhcccceeeeecc----e
Q 020011 11 YLLEVHRILRPGGFWVLSGPPVNYEHRW---------RGWNTTIEEQRS----DYKKLQDLLTSMCFKLYAKKDD----I 73 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv~~~~~~---------~~~~~~~~~~~~----~~~~~~~l~~~~cw~~~~~~~~----~ 73 (332)
+|-|+-|+|+|||+++++-|...-.... .+|......... .-++++++.+.--++.+..... +
T Consensus 127 ~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~~~~w~ 206 (220)
T 3hnr_A 127 AIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLNHFVWV 206 (220)
T ss_dssp HHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECSSSEEE
T ss_pred HHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeeccceEEE
Confidence 4668889999999999986432110000 001000011100 0156777888888877766554 4
Q ss_pred EEEeecCCCh
Q 020011 74 AVWQKLSDSS 83 (332)
Q Consensus 74 aiw~Kp~~~~ 83 (332)
++=+||..++
T Consensus 207 ~~~~~~~~~~ 216 (220)
T 3hnr_A 207 MEATKQLEHH 216 (220)
T ss_dssp EEEEECSCCC
T ss_pred Eeehhhhhhh
Confidence 5556665543
No 355
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=68.07 E-value=2.8 Score=36.17 Aligned_cols=52 Identities=13% Similarity=0.265 Sum_probs=31.9
Q ss_pred EEEEeeceecCCceEEeccCCccccccccCCCCCHHHHHHHHHHHHHHHHhcccceeee
Q 020011 11 YLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAK 69 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~cw~~~~~ 69 (332)
+|-++-|+|+|||++++...+.........|..+.+ ++.++.+...|+.+..
T Consensus 153 ~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 153 WAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVS-------TFEEVLVPIGFKAVSV 204 (235)
T ss_dssp HHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHH-------HHHHHHGGGTEEEEEE
T ss_pred HHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHH-------HHHHHHHHcCCeEEEE
Confidence 355778999999999986655432222223434443 3566777777766543
No 356
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=67.50 E-value=5.3 Score=37.18 Aligned_cols=90 Identities=9% Similarity=0.048 Sum_probs=54.0
Q ss_pred CCeEEEecCcc-hHHHHHHhcC-CC-eEEEEeecCc-hhhHHHHHhcCccccc--c--cccccCCC-CC-CccceeEehh
Q 020011 182 IRNVMDMNTLY-GGFAAAVIDD-PL-WVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAFST-YP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~~-~v-~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~~~-yp-~sFDlVh~s~ 251 (332)
..+||=+|+|. |.++..|++. |. .| ..++. ++.++.+.+-|....+ + ++.+.... .. +.||+|.-.
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~~V---i~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~- 242 (352)
T 3fpc_A 167 GDTVCVIGIGPVGLMSVAGANHLGAGRI---FAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIA- 242 (352)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCSSE---EEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEEC-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEE---EEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEEC-
Confidence 56788889875 5666666653 54 33 33455 6677888877753221 1 11111111 23 579988754
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. -...+.+.-+.|||||.+++..
T Consensus 243 ----~g----~~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 243 ----GG----DVHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp ----SS----CTTHHHHHHHHEEEEEEEEECC
T ss_pred ----CC----ChHHHHHHHHHHhcCCEEEEec
Confidence 11 1247888999999999998653
No 357
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=67.41 E-value=11 Score=34.87 Aligned_cols=89 Identities=15% Similarity=0.179 Sum_probs=52.6
Q ss_pred CCeEEEec-C-cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c-cccccCCC-CCCccceeEehhhh
Q 020011 182 IRNVMDMN-T-LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H-DWCEAFST-YPRTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~G-C-G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~-d~~e~~~~-yp~sFDlVh~s~vf 253 (332)
..+||=.| + |.|.+++.|++ .|. .|..++. ++.++.+.+-|.--.+ . ++.+.+.. ..+.||+|.-.
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga---~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~--- 224 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGL---RVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCT--- 224 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC---EEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEES---
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEEC---
Confidence 56788884 4 34556666655 465 3444555 6677888776642111 1 11111111 22578988754
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEE
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~ 282 (332)
..-...+.+.-+.|||||.++..
T Consensus 225 ------~g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 225 ------FNTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ------SCHHHHHHHHHHHEEEEEEEEES
T ss_pred ------CCchHHHHHHHHHhccCCEEEEE
Confidence 12345778889999999999764
No 358
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=67.04 E-value=1.8 Score=38.59 Aligned_cols=58 Identities=17% Similarity=0.132 Sum_probs=34.5
Q ss_pred EEEEeeceecCCceEEeccCCccccccc-----cCCCCCHHHHHHHHHHHHHHHHhcccceeee
Q 020011 11 YLLEVHRILRPGGFWVLSGPPVNYEHRW-----RGWNTTIEEQRSDYKKLQDLLTSMCFKLYAK 69 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~cw~~~~~ 69 (332)
+|-|+-|+|+|||+|++.-.|- +...+ +|.-++........+++.++++..-|+.+.-
T Consensus 119 ~l~~i~rvLkpgG~lv~~~~p~-~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~ 181 (232)
T 3opn_A 119 ILPPLYEILEKNGEVAALIKPQ-FEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGL 181 (232)
T ss_dssp THHHHHHHSCTTCEEEEEECHH-HHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHhccCCCEEEEEECcc-cccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEE
Confidence 4567889999999999874443 22111 1111223322334567778888888876543
No 359
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=66.55 E-value=2.4 Score=39.72 Aligned_cols=89 Identities=12% Similarity=0.059 Sum_probs=50.3
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccc--cc---cccccCCCCCCccceeEehhhh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGT--YH---DWCEAFSTYPRTYDLLHLDGLF 253 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~---d~~e~~~~yp~sFDlVh~s~vf 253 (332)
..+||-+|+|. |.+++.|++ .|.. |..++. ++.++.+.+-|..-. +. ++.+... +.||+|+-.---
T Consensus 180 g~~VlV~GaG~vG~~~~qlak~~Ga~---Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~---~~~D~vid~~g~ 253 (360)
T 1piw_A 180 GKKVGIVGLGGIGSMGTLISKAMGAE---TYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF---DTFDLIVVCASS 253 (360)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC---SCEEEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh---cCCCEEEECCCC
Confidence 56899999853 555666655 3653 333443 556677776664221 11 1111111 478988754211
Q ss_pred ccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 254 TAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. ...+.+.-+.|||||.+++..
T Consensus 254 --~~-----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 254 --LT-----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp --ST-----TCCTTTGGGGEEEEEEEEECC
T ss_pred --Cc-----HHHHHHHHHHhcCCCEEEEec
Confidence 00 124566778999999998753
No 360
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=66.41 E-value=8.3 Score=36.47 Aligned_cols=78 Identities=15% Similarity=0.219 Sum_probs=48.4
Q ss_pred CccceeEehh----hhccccccCCHHH-----HHHHHHhhhcCCcEEEEEcC----hhHHHHHHHHHhcCcceeeecccc
Q 020011 242 RTYDLLHLDG----LFTAESHRCDMKF-----VLLEMDRILRPNGYVIVRES----SYFIDAVATIAKGMKWSCHKEDTE 308 (332)
Q Consensus 242 ~sFDlVh~s~----vf~h~~~~c~~~~-----iL~EmdRVLRPGG~lii~d~----~~~~~~i~~i~~~l~W~~~~~~~e 308 (332)
..||||+++- -.||++. |+=.. +-...-+.|+|||.+++..= ...-.-|..+|++++-..... .+
T Consensus 210 grYDlVfvNv~TpyR~HHYQQ-CeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~-P~ 287 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQ-CVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALK-PP 287 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHH-HHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEEC-CT
T ss_pred CceeEEEEecCCccccchHHH-HHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeec-Cc
Confidence 7899999862 3467763 53333 33455689999999999861 112244677888887654443 22
Q ss_pred ccc-ccceEEEEEe
Q 020011 309 YGV-EKEKLLLCQK 321 (332)
Q Consensus 309 ~~~-~~e~~li~~K 321 (332)
-.. +.|-+++..+
T Consensus 288 cv~snTEv~~vF~~ 301 (324)
T 3trk_A 288 CVTSNTEMFFLFSN 301 (324)
T ss_dssp TCCBTTCEEEEEEE
T ss_pred cccccceEEEEEEe
Confidence 222 4566666654
No 361
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=65.58 E-value=12 Score=35.15 Aligned_cols=91 Identities=8% Similarity=-0.134 Sum_probs=52.8
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccc--cc----cccccCCCC-CCccceeEehh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGT--YH----DWCEAFSTY-PRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~----d~~e~~~~y-p~sFDlVh~s~ 251 (332)
..+||=+|||. |.+++.|++ .|.- .|..++. ++.++.+.+-|.--. +. ++.+..... ++.||+|+-.
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~- 272 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGAS--RIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC- 272 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEEC-
Confidence 56899999864 556666665 4541 2333444 667777877675221 11 111111101 1368877643
Q ss_pred hhccccccCCHHHHHHHHHhhhcCC-cEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPN-GYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPG-G~lii~d 283 (332)
. .-...+.+.-+.|||| |.+++..
T Consensus 273 ----~----G~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 273 ----A----GTAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp ----S----CCHHHHHHHHHTBCTTTCEEEECC
T ss_pred ----C----CCHHHHHHHHHHhhcCCCEEEEEC
Confidence 1 1135788999999999 9998754
No 362
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=65.05 E-value=3.2 Score=35.12 Aligned_cols=64 Identities=8% Similarity=-0.030 Sum_probs=34.4
Q ss_pred EEEEeeceecCCceEEeccCCccccccccC--CCCCHHHHHHHHHHHHHHHHhcccceeeeec-----ceEEEeecCC
Q 020011 11 YLLEVHRILRPGGFWVLSGPPVNYEHRWRG--WNTTIEEQRSDYKKLQDLLTSMCFKLYAKKD-----DIAVWQKLSD 81 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~cw~~~~~~~-----~~aiw~Kp~~ 81 (332)
+|-|+-|+|+|||+++++.+-......... ..-+ .+++.++.+...++.+.... ...+.+|+..
T Consensus 125 ~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~~~ 195 (219)
T 3dh0_A 125 FLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYS-------EWEVGLILEDAGIRVGRVVEVGKYCFGVYAMIVKQ 195 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCC-------HHHHHHHHHHTTCEEEEEEEETTTEEEEEEECC--
T ss_pred HHHHHHHHhCCCeEEEEEEecccccccCCchhcccC-------HHHHHHHHHHCCCEEEEEEeeCCceEEEEEEeccc
Confidence 345778999999999997422110000000 0111 23466777877887765433 1456666643
No 363
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=64.17 E-value=8.6 Score=35.19 Aligned_cols=88 Identities=13% Similarity=0.084 Sum_probs=50.6
Q ss_pred eEEEecC--cchHHHHHHhc-CCCeEEEEeecCchhhHHHHHhcCccc--ccccc-cccCCCCC-CccceeEehhhhccc
Q 020011 184 NVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYAANTLAVVYDRGLIG--TYHDW-CEAFSTYP-RTYDLLHLDGLFTAE 256 (332)
Q Consensus 184 ~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~~~~l~~a~eRGlig--~~~d~-~e~~~~yp-~sFDlVh~s~vf~h~ 256 (332)
+||=.|| |.|.++..+++ .|..++.+... ++.++.+.+-|.-- .+.+. .+...... +.||+|+-. .
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~--~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~-----~ 225 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGN--REAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDP-----V 225 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESS--SSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEES-----C
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEEC-----C
Confidence 6999997 56666666655 35544333332 44566666655421 12211 11111122 568887654 1
Q ss_pred cccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 257 SHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 257 ~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. . ..+.+.-+.|||||.+++..
T Consensus 226 g---~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 226 G---G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp C---T--HHHHHHHTTEEEEEEEEECC
T ss_pred c---H--HHHHHHHHhhcCCCEEEEEe
Confidence 1 1 36888899999999998754
No 364
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=64.07 E-value=7.7 Score=35.90 Aligned_cols=89 Identities=13% Similarity=0.066 Sum_probs=52.3
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccc--cc--cccccCC-CCC-CccceeEehh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGT--YH--DWCEAFS-TYP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~--d~~e~~~-~yp-~sFDlVh~s~ 251 (332)
..+||-.|+ |.|.+++.++. .|..+ ..++. ++.++.+.+.|.... +. ++.+.+. ... +.||+|+..-
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~V---i~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 243 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARV---IATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHT 243 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEE---EEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 578999998 67777766655 56533 33444 556666665553211 11 0101111 123 5789887652
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
- ...+.+.-+.|+|||.+++..
T Consensus 244 g----------~~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 244 G----------ALYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp C----------SSSHHHHHHHEEEEEEEEESS
T ss_pred C----------HHHHHHHHHhhccCCEEEEEe
Confidence 1 135777889999999998754
No 365
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=64.00 E-value=1 Score=41.00 Aligned_cols=19 Identities=26% Similarity=0.627 Sum_probs=16.2
Q ss_pred EEEEeeceecCCceEEecc
Q 020011 11 YLLEVHRILRPGGFWVLSG 29 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ 29 (332)
.|-|+.|||||||.|++..
T Consensus 117 ~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 117 FWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEE
Confidence 5679999999999998754
No 366
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=63.05 E-value=11 Score=35.29 Aligned_cols=91 Identities=10% Similarity=-0.104 Sum_probs=53.4
Q ss_pred CCeEEEecCcc-hHHHHHHhcC-CCeEEEEeecCc-hhhHHHHHhcCcccc--cc----cccccCCCC-CCccceeEehh
Q 020011 182 IRNVMDMNTLY-GGFAAAVIDD-PLWVMNVVSSYA-ANTLAVVYDRGLIGT--YH----DWCEAFSTY-PRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~~-~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~----d~~e~~~~y-p~sFDlVh~s~ 251 (332)
..+||=+|||. |.++..|++. |.- .|+.++. ++.++++.+-|..-. +. ++.+..... ++.||+|+-.
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~- 270 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGAS--RIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFEC- 270 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCS--CEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEEC-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEEC-
Confidence 56788899863 6666666553 541 1334454 667778877775321 11 111111111 2468887754
Q ss_pred hhccccccCCHHHHHHHHHhhhcCC-cEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPN-GYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPG-G~lii~d 283 (332)
. .-...+.+.-+.|||| |.+++..
T Consensus 271 ----~----g~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 271 ----I----GNVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp ----S----CCHHHHHHHHHTBCTTTCEEEECS
T ss_pred ----C----CCHHHHHHHHHHhhccCCEEEEEc
Confidence 1 1235788999999997 9998854
No 367
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=62.01 E-value=4.1 Score=38.57 Aligned_cols=90 Identities=20% Similarity=0.116 Sum_probs=52.6
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CC-CeEEEEeecCc-hhhHHHHHhcCccccc--c-----cccccCCC-CC-CccceeE
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DP-LWVMNVVSSYA-ANTLAVVYDRGLIGTY--H-----DWCEAFST-YP-RTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~-v~vmnv~p~d~-~~~l~~a~eRGlig~~--~-----d~~e~~~~-yp-~sFDlVh 248 (332)
..+||-.|+|. |.+++.|++ .| ..| ..++. ++.++.+.+-|.--.+ . ++.+.... .+ +.||+|+
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~V---i~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvi 272 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARSLGAENV---IVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFIL 272 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBSEE---EEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCceE---EEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEE
Confidence 56899999763 555666655 45 333 33443 5677777776642211 1 11111111 23 4699887
Q ss_pred ehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 249 LDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 249 ~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
-.- . -...+.+.-+.|||||.+++..
T Consensus 273 d~~-----g----~~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 273 EAT-----G----DSRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp ECS-----S----CTTHHHHHHHHEEEEEEEEECC
T ss_pred ECC-----C----CHHHHHHHHHHHhcCCEEEEEe
Confidence 541 1 1246788899999999998754
No 368
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=61.65 E-value=15 Score=33.68 Aligned_cols=90 Identities=11% Similarity=-0.028 Sum_probs=53.1
Q ss_pred CCCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c--cccccCC-CCC-CccceeEeh
Q 020011 181 KIRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAFS-TYP-RTYDLLHLD 250 (332)
Q Consensus 181 ~~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~~-~yp-~sFDlVh~s 250 (332)
...+||=.|+ |.|.+++.+++ .|.. |..++. ++.++.+.+.|.--.+ . ++.+... -.. +.||+|+.+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 216 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAK---LIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDG 216 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCE---EEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence 3578999983 55666666655 4653 344444 6667777776642111 1 1111110 123 579988765
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
-- ...+.+.-+.|||||.+++..
T Consensus 217 ~g----------~~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 217 VG----------QDTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp SC----------GGGHHHHHTTEEEEEEEEECC
T ss_pred CC----------hHHHHHHHHHhcCCCEEEEEe
Confidence 11 136778889999999999864
No 369
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=61.63 E-value=7.8 Score=35.90 Aligned_cols=90 Identities=8% Similarity=-0.007 Sum_probs=51.7
Q ss_pred CCeEEEecCc--chHHHHHHhc-C-CCeEEEEeecCc-hhhHHHHHhcCcccc--ccc--ccccCCC-CC-CccceeEeh
Q 020011 182 IRNVMDMNTL--YGGFAAAVID-D-PLWVMNVVSSYA-ANTLAVVYDRGLIGT--YHD--WCEAFST-YP-RTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GCG--~Ggfaa~L~~-~-~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~d--~~e~~~~-yp-~sFDlVh~s 250 (332)
..+||-.|+| .|.+++.++. . |.. |..++. ++.++.+.+.|..-. +.+ +.+.... .. +.+|+|+..
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~---Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGAT---IIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCE---EEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCCe---EEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEEC
Confidence 5789999997 5555555544 4 653 344443 556666666553211 111 1000000 12 468887755
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. .-...+.+.-+.|||||.+++..
T Consensus 248 ~---------g~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 248 N---------NSEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp C---------CCHHHHTTGGGGEEEEEEEEECC
T ss_pred C---------CCHHHHHHHHHHHhcCCEEEEEC
Confidence 1 11347888899999999998753
No 370
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=61.55 E-value=6 Score=33.34 Aligned_cols=59 Identities=22% Similarity=0.203 Sum_probs=38.0
Q ss_pred CCCCC-CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcChhHHHHHHHHHhcCc
Q 020011 237 FSTYP-RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMK 299 (332)
Q Consensus 237 ~~~yp-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~i~~~l~ 299 (332)
+-..| ++||+||--.==.. ..+.-...++.-+.+-|||||.|.- -+. -.+++.|..++-
T Consensus 52 ~VsLp~stYD~V~~lt~~~~-~~~~l~r~li~~l~~aLkpgG~L~g-l~~--~~~~EailaGfv 111 (136)
T 2km1_A 52 SITLENAKYETVHYLTPEAQ-TDIKFPKKLISVLADSLKPNGSLIG-LSD--IYKVDALINGFE 111 (136)
T ss_dssp CCCCCSSSCCSEEEECCCSS-CSCCCCHHHHHHHHTTCCTTCCEEC-CCH--HHHHHHHHHTEE
T ss_pred cccCCcccccEEEEecCCcc-chhhcCHHHHHHHHHHhCCCCEEEe-cCc--chhhHHHhhccE
Confidence 34678 99999986310000 0011226899999999999999997 111 256677766654
No 371
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=60.60 E-value=8.2 Score=35.93 Aligned_cols=91 Identities=10% Similarity=-0.126 Sum_probs=50.4
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccc-cc-------ccccccC--CCCCCccceeE
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIG-TY-------HDWCEAF--STYPRTYDLLH 248 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig-~~-------~d~~e~~--~~yp~sFDlVh 248 (332)
..+||=.|+|. |.++..|++ .|... |..++. ++.++++.+.+-.. .+ .++.+.. .+-.+.||+|+
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~--Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvi 257 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACP--LVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVAL 257 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCS--EEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCE--EEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEE
Confidence 45788888864 556666655 35531 222333 55566665542110 11 1111111 11136789887
Q ss_pred ehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 249 LDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 249 ~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
-.- .-...+.+.-+.|||||.+++..
T Consensus 258 d~~---------g~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 258 ECT---------GVESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp ECS---------CCHHHHHHHHHHSCTTCEEEECC
T ss_pred ECC---------CChHHHHHHHHHhcCCCEEEEEc
Confidence 541 11347888999999999999854
No 372
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=60.05 E-value=1.5 Score=39.46 Aligned_cols=18 Identities=44% Similarity=0.835 Sum_probs=15.2
Q ss_pred EEEeeceecCCceEEecc
Q 020011 12 LLEVHRILRPGGFWVLSG 29 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~ 29 (332)
|-|+-|+|||||+|++++
T Consensus 198 l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 198 LDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEEE
Confidence 446789999999999974
No 373
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=59.96 E-value=8 Score=35.39 Aligned_cols=88 Identities=15% Similarity=0.048 Sum_probs=49.2
Q ss_pred eEEEecC--cchHHHHHHhc-CCCeEEEEeecCchhhHHHHHhcCccc--ccccc-cccCCCCC-CccceeEehhhhccc
Q 020011 184 NVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYAANTLAVVYDRGLIG--TYHDW-CEAFSTYP-RTYDLLHLDGLFTAE 256 (332)
Q Consensus 184 ~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~~~~l~~a~eRGlig--~~~d~-~e~~~~yp-~sFDlVh~s~vf~h~ 256 (332)
+||=.|| |.|.++..+++ .|..++.+... ++.++.+.+-|.-- .+.+. .+...... +.||+|+-. .
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~--~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~-----~ 224 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGK--AAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDP-----V 224 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESC--TTCHHHHHHTTCSEEEECC---------CCSCCEEEEEEC-----S
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEEC-----C
Confidence 6999997 66777777665 46544333322 45666676656421 12211 01111122 568877644 1
Q ss_pred cccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 257 SHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 257 ~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. ..+.+.-+.|||||.+++..
T Consensus 225 g~-----~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 225 GG-----RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp TT-----TTHHHHHHTEEEEEEEEECS
T ss_pred cH-----HHHHHHHHhhccCCEEEEEe
Confidence 11 25677889999999999754
No 374
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=59.86 E-value=11 Score=31.91 Aligned_cols=68 Identities=12% Similarity=0.186 Sum_probs=35.2
Q ss_pred EEEEeeceecCCceEEeccCCccccccc------------cCCCCCHHHHHHHHHHHHHHHHhcccceeeee--------
Q 020011 11 YLLEVHRILRPGGFWVLSGPPVNYEHRW------------RGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKK-------- 70 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~cw~~~~~~-------- 70 (332)
+|-|+-|+|+|||++|.+ |...+...+ ..+.-+.++++. -++++++.--++.....
T Consensus 123 ~l~~~~~~LkpgG~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~l~~~~Gf~v~~~~~g~~~~~~ 198 (219)
T 3jwg_A 123 FEKVLFEFTRPQTVIVST-PNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQT---WAVKVAEKYGYSVRFLQIGEIDDEF 198 (219)
T ss_dssp HHHHHHTTTCCSEEEEEE-EBGGGGGCCCCT-----GGGCCTTSBCHHHHHH---HHHHHHHHHTEEEEEEEESCCCTTS
T ss_pred HHHHHHHhhCCCEEEEEc-cchhhhhhhcccCcccccccCceeeecHHHHHH---HHHHHHHHCCcEEEEEecCCccccC
Confidence 345678999999966643 322221111 011113444432 24566666666554431
Q ss_pred ---cceEEEeecCCC
Q 020011 71 ---DDIAVWQKLSDS 82 (332)
Q Consensus 71 ---~~~aiw~Kp~~~ 82 (332)
.++||+.|...+
T Consensus 199 g~~~qi~~~~~~~~~ 213 (219)
T 3jwg_A 199 GSPTQMGVFTLGAGG 213 (219)
T ss_dssp CCSEEEEEEEECC--
T ss_pred CCCeEEEEEeccCCC
Confidence 147888887643
No 375
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=58.72 E-value=1.3 Score=41.08 Aligned_cols=21 Identities=10% Similarity=0.194 Sum_probs=17.3
Q ss_pred EEEEeeceecCCceEEeccCC
Q 020011 11 YLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~pp 31 (332)
.|-|+-|+|||||+||.+.|-
T Consensus 151 ~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 151 VMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp HHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHcCCCCEEEEEeCC
Confidence 355688999999999998773
No 376
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=57.95 E-value=8.6 Score=35.91 Aligned_cols=56 Identities=18% Similarity=0.178 Sum_probs=36.4
Q ss_pred EEEEeeceecCCceEEeccCCcccccc-----ccCCCCCHHHHHHHHHHHHHHHHhccccee
Q 020011 11 YLLEVHRILRPGGFWVLSGPPVNYEHR-----WRGWNTTIEEQRSDYKKLQDLLTSMCFKLY 67 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~cw~~~ 67 (332)
.|-|+-|+|+|||.+|..--|- |+.. -+|.-+++...+.--+++.+++...-|+..
T Consensus 167 vL~e~~rvLkpGG~lv~lvkPq-fe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~ 227 (291)
T 3hp7_A 167 ILPALAKILVDGGQVVALVKPQ-FEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVK 227 (291)
T ss_dssp THHHHHHHSCTTCEEEEEECGG-GTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHcCcCCEEEEEECcc-cccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 4568899999999999973332 2211 124445555555556677788788888655
No 377
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=57.66 E-value=24 Score=32.79 Aligned_cols=89 Identities=15% Similarity=0.084 Sum_probs=51.1
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccc--cc--cccccCC-CCC-CccceeEehh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGT--YH--DWCEAFS-TYP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~--d~~e~~~-~yp-~sFDlVh~s~ 251 (332)
..+||-.|+ |.|.+++.++. .|.. |..++. ++.++.+.+.|.... +. ++.+.+. ... +.+|+|+.+-
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga~---Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 247 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGLK---ILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEML 247 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence 578999997 56666655554 5653 333443 556666666554211 11 0111110 112 4688887551
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
-...+.+.-+.|||||.+++..
T Consensus 248 ----------G~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 248 ----------ANVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp ----------HHHHHHHHHHHEEEEEEEEECC
T ss_pred ----------ChHHHHHHHHhccCCCEEEEEe
Confidence 1235778889999999998754
No 378
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=57.44 E-value=26 Score=31.49 Aligned_cols=101 Identities=9% Similarity=0.024 Sum_probs=58.8
Q ss_pred CeEEEecCcc-h-HHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCCCccceeEehhhhcccccc
Q 020011 183 RNVMDMNTLY-G-GFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 183 r~VLD~GCG~-G-gfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~~ 259 (332)
.+|-=+|||. | .++..|++.+. +|...|. ++.++.+.+.|+... .+..+. -...|+|+.. +++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~---~V~~~d~~~~~~~~~~~~g~~~~-~~~~~~----~~~aDvvi~~-----vp~~ 70 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY---LLNVFDLVQSAVDGLVAAGASAA-RSARDA----VQGADVVISM-----LPAS 70 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC---EEEEECSSHHHHHHHHHTTCEEC-SSHHHH----HTTCSEEEEC-----CSCH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC---eEEEEcCCHHHHHHHHHCCCeEc-CCHHHH----HhCCCeEEEE-----CCCH
Confidence 4677789986 3 46777888876 4455566 666666666665321 111011 1456877765 3333
Q ss_pred CCHHHHHH---HHHhhhcCCcEEEEEc--ChhHHHHHHHHHh
Q 020011 260 CDMKFVLL---EMDRILRPNGYVIVRE--SSYFIDAVATIAK 296 (332)
Q Consensus 260 c~~~~iL~---EmdRVLRPGG~lii~d--~~~~~~~i~~i~~ 296 (332)
..+..++. ++...|+||-.++-.. .......+.+.+.
T Consensus 71 ~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~ 112 (302)
T 2h78_A 71 QHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAAR 112 (302)
T ss_dssp HHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHH
Confidence 33556777 7888889988776633 3333445555443
No 379
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=57.20 E-value=1.6 Score=39.56 Aligned_cols=20 Identities=40% Similarity=0.491 Sum_probs=16.4
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||.||++-+
T Consensus 160 ~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 160 LLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEec
Confidence 45678899999999999743
No 380
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=56.84 E-value=11 Score=35.17 Aligned_cols=89 Identities=16% Similarity=0.110 Sum_probs=53.1
Q ss_pred CCeEEEec--CcchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c--cccccCC-CCCCccceeEehhh
Q 020011 182 IRNVMDMN--TLYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAFS-TYPRTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~G--CG~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~~-~yp~sFDlVh~s~v 252 (332)
..+||=.| .|.|.+++.+++ .|.. |..++. ++.++.+.+.|..-.+ . ++.+.+. ..++.||+|+-.-
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~---Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~- 239 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAKCH---VIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESV- 239 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECS-
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCE---EEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECC-
Confidence 57899999 356777766655 4653 344444 5667777766642111 1 1111111 1135688877541
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. ...+.++-+.|||||.+++..
T Consensus 240 ----g-----~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 240 ----G-----GAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp ----C-----THHHHHHHHHEEEEEEEEECC
T ss_pred ----C-----HHHHHHHHHHHhcCCEEEEEe
Confidence 1 147888899999999998854
No 381
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=56.60 E-value=18 Score=33.08 Aligned_cols=90 Identities=12% Similarity=-0.028 Sum_probs=52.9
Q ss_pred CCCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c--cccccC--CCCCCccceeEeh
Q 020011 181 KIRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAF--STYPRTYDLLHLD 250 (332)
Q Consensus 181 ~~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~--~~yp~sFDlVh~s 250 (332)
...+||=.|+ |.|.+++.+++ .|.. |..++. ++.++.+.+-|....+ . ++.+.. .+-.+.||+|+..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~ 224 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAH---TIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDS 224 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence 3578999994 55666665554 4663 344444 6677777776642111 1 111111 0113579988755
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
-- ...+...-+.|||||.+++..
T Consensus 225 ~g----------~~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 225 VG----------KDTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CG----------GGGHHHHHHHEEEEEEEEECC
T ss_pred CC----------hHHHHHHHHHhccCCEEEEEc
Confidence 21 135777888999999999854
No 382
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=55.40 E-value=7.3 Score=36.11 Aligned_cols=91 Identities=14% Similarity=-0.030 Sum_probs=52.4
Q ss_pred CCCeEEEecCcc-hHHHHHHhc-CCC-eEEEEeecCc-hhhHHHHHhcCcccc--cc--cccccCCC-CC-CccceeEeh
Q 020011 181 KIRNVMDMNTLY-GGFAAAVID-DPL-WVMNVVSSYA-ANTLAVVYDRGLIGT--YH--DWCEAFST-YP-RTYDLLHLD 250 (332)
Q Consensus 181 ~~r~VLD~GCG~-Ggfaa~L~~-~~v-~vmnv~p~d~-~~~l~~a~eRGlig~--~~--d~~e~~~~-yp-~sFDlVh~s 250 (332)
...+||-+|+|. |.+++.+++ .|. .|+ .++. ++.++.+.+-|..-. +. ++.+.+.. .. +.||+|+-.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi---~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~ 243 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVI---VSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEF 243 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEE---EECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEE---EECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence 356899999853 555555554 454 343 3333 566677766664211 11 11111111 12 468988754
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
- .....+.+..+.|+|||.+++..
T Consensus 244 ~---------g~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 244 S---------GAPKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp S---------CCHHHHHHHHHHEEEEEEEEECC
T ss_pred C---------CCHHHHHHHHHHHhcCCEEEEEc
Confidence 1 11357888899999999998754
No 383
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=55.39 E-value=1.8 Score=37.71 Aligned_cols=48 Identities=17% Similarity=0.152 Sum_probs=29.0
Q ss_pred EEEeeceecCCceEEeccC--CccccccccCCCCCHHHHHHHHHHHHHHHHhcccceeeee
Q 020011 12 LLEVHRILRPGGFWVLSGP--PVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKK 70 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~p--pv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~cw~~~~~~ 70 (332)
|-|+-|+|+|||+|+++-+ |+.+ ....++.- -++++.|.+. ++.+...
T Consensus 144 l~~~~r~LkpgG~l~i~~~~~~~~~-------~~~~~~~~--~~~~~~l~~~--f~~~~~~ 193 (210)
T 1nt2_A 144 KANAEFFLKEKGEVVIMVKARSIDS-------TAEPEEVF--KSVLKEMEGD--FKIVKHG 193 (210)
T ss_dssp HHHHHHHEEEEEEEEEEEEHHHHCT-------TSCHHHHH--HHHHHHHHTT--SEEEEEE
T ss_pred HHHHHHHhCCCCEEEEEEecCCccc-------cCCHHHHH--HHHHHHHHhh--cEEeeee
Confidence 5678999999999999832 2322 22334332 1345566666 6666543
No 384
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=55.33 E-value=1.5 Score=38.40 Aligned_cols=102 Identities=12% Similarity=0.124 Sum_probs=55.8
Q ss_pred eEEEecCcchHHHHHHhc----CCCeEEEEeecCchhhHHHHHhcCcccccccccccC-CCCCCccceeEehhhhccccc
Q 020011 184 NVMDMNTLYGGFAAAVID----DPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWCEAF-STYPRTYDLLHLDGLFTAESH 258 (332)
Q Consensus 184 ~VLD~GCG~Ggfaa~L~~----~~v~vmnv~p~d~~~~l~~a~eRGlig~~~d~~e~~-~~yp~sFDlVh~s~vf~h~~~ 258 (332)
-|||+|-|.|.+=-+|.+ +.++|++-+-...++..+-. ++-+.|.+.+--.+. ..|...--|+|+..-..+-..
T Consensus 43 pVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~-e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~G~g~~~~ 121 (174)
T 3iht_A 43 PVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPE-AQLILGDIRETLPATLERFGATASLVHADLGGHNREK 121 (174)
T ss_dssp CEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCG-GGEEESCHHHHHHHHHHHHCSCEEEEEECCCCSCHHH
T ss_pred ceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCch-HheecccHHHHHHHHHHhcCCceEEEEeecCCCCcch
Confidence 499999999988888876 45677653211111111100 122333332211111 124566778888755543211
Q ss_pred -cCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 259 -RCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 259 -~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
.....++--=|..+|.|||+++-.++.+
T Consensus 122 d~a~a~~lsplI~~~la~GGi~vS~~pl~ 150 (174)
T 3iht_A 122 NDRFARLISPLIEPHLAQGGLMVSSDRMY 150 (174)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEEEESSCCC
T ss_pred hHHHHHhhhHHHHHHhcCCcEEEeCCccC
Confidence 0111235556789999999999888764
No 385
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=55.11 E-value=17 Score=33.70 Aligned_cols=90 Identities=14% Similarity=0.076 Sum_probs=52.8
Q ss_pred CCCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc---ccccccCCC-CC-CccceeEehh
Q 020011 181 KIRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY---HDWCEAFST-YP-RTYDLLHLDG 251 (332)
Q Consensus 181 ~~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~---~d~~e~~~~-yp-~sFDlVh~s~ 251 (332)
...+||=.|| |.|.+++.+++ .|..+ ..++. ++.++.+.+-|....+ .++.+.... .. +.||+|+-.-
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~V---i~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKV---IAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEE---EEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEE---EEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECC
Confidence 3578999997 56777766655 46643 33444 5566777766642211 111111111 23 4799887541
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. ...+.+.-+.|+|||.+++..
T Consensus 236 -----g-----~~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 236 -----G-----GPAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp -----C-------CHHHHHHTEEEEEEEEEC-
T ss_pred -----c-----hhHHHHHHHhhcCCCEEEEEE
Confidence 1 125778889999999999864
No 386
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=54.69 E-value=11 Score=35.01 Aligned_cols=40 Identities=13% Similarity=-0.105 Sum_probs=33.0
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR 224 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR 224 (332)
...|||.=||.|+++.+-.+.|. +..++|. +....++.+|
T Consensus 253 ~~~VlDpF~GsGtt~~aa~~~gr---~~ig~e~~~~~~~~~~~r 293 (323)
T 1boo_A 253 DDLVVDIFGGSNTTGLVAERESR---KWISFEMKPEYVAASAFR 293 (323)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHGG
T ss_pred CCEEEECCCCCCHHHHHHHHcCC---CEEEEeCCHHHHHHHHHH
Confidence 56799999999999988777776 5567777 7888888888
No 387
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=54.46 E-value=23 Score=33.14 Aligned_cols=91 Identities=8% Similarity=-0.007 Sum_probs=53.8
Q ss_pred CCCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCchhhHHHHHhcCccccc--c--cccccCCC-CCCccceeEehhh
Q 020011 181 KIRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYAANTLAVVYDRGLIGTY--H--DWCEAFST-YPRTYDLLHLDGL 252 (332)
Q Consensus 181 ~~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~~~~l~~a~eRGlig~~--~--d~~e~~~~-yp~sFDlVh~s~v 252 (332)
...+||=.|+ |.|.++..|++ .|..++.+. .++.++++.+-|....+ . ++.+.... -++.||+|+-.
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~-- 238 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC---SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDC-- 238 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE---CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEES--
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe---CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEEC--
Confidence 3578999998 37888877766 466554332 35567788777752211 1 11111111 13348877643
Q ss_pred hccccccCCHHHHHHHHHhhh-cCCcEEEEEc
Q 020011 253 FTAESHRCDMKFVLLEMDRIL-RPNGYVIVRE 283 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVL-RPGG~lii~d 283 (332)
. .-...+....+.| ||||.+++..
T Consensus 239 ---~----g~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 239 ---I----TNVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp ---S----CSHHHHHHHHHHSCTTCEEEEESS
T ss_pred ---C----CchHHHHHHHHHhhcCCCEEEEEe
Confidence 1 1235677888888 7999998754
No 388
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=54.44 E-value=60 Score=28.56 Aligned_cols=86 Identities=13% Similarity=0.033 Sum_probs=50.6
Q ss_pred eEEEecCcch--HHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCCCccceeEehhhhccccccC
Q 020011 184 NVMDMNTLYG--GFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHRC 260 (332)
Q Consensus 184 ~VLD~GCG~G--gfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~~c 260 (332)
+|.=+|||.= .++..|.+.+. +|..++. ++.++.+.+.|+..... ...... ...|+|+.. ++. .
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~-~~~D~vi~a-----v~~-~ 68 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH---YLIGVSRQQSTCEKAVERQLVDEAG---QDLSLL-QTAKIIFLC-----TPI-Q 68 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHTTSCSEEE---SCGGGG-TTCSEEEEC-----SCH-H
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHhCCCCcccc---CCHHHh-CCCCEEEEE-----CCH-H
Confidence 4666788763 35667777775 4455555 55666666666542111 111112 567887766 222 2
Q ss_pred CHHHHHHHHHhhhcCCcEEEEE
Q 020011 261 DMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 261 ~~~~iL~EmdRVLRPGG~lii~ 282 (332)
....++.++...|+||..++-.
T Consensus 69 ~~~~~~~~l~~~~~~~~~vv~~ 90 (279)
T 2f1k_A 69 LILPTLEKLIPHLSPTAIVTDV 90 (279)
T ss_dssp HHHHHHHHHGGGSCTTCEEEEC
T ss_pred HHHHHHHHHHhhCCCCCEEEEC
Confidence 3457888888889988766543
No 389
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=54.17 E-value=2.1 Score=37.70 Aligned_cols=16 Identities=13% Similarity=0.254 Sum_probs=14.1
Q ss_pred EEEeeceecCCceEEe
Q 020011 12 LLEVHRILRPGGFWVL 27 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~ 27 (332)
|-|+-|+|||||+|++
T Consensus 122 l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 122 LSNVADLAKKEAHFEF 137 (225)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEE
Confidence 4577899999999999
No 390
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=54.15 E-value=1.9 Score=36.91 Aligned_cols=21 Identities=29% Similarity=0.390 Sum_probs=17.1
Q ss_pred EEEEee-ceecCCceEEeccCC
Q 020011 11 YLLEVH-RILRPGGFWVLSGPP 31 (332)
Q Consensus 11 ~l~E~d-RvLRpgGy~v~s~pp 31 (332)
+|-|+- |+|+|||+++++.|-
T Consensus 122 ~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 122 LLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp HHHHHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEEcCC
Confidence 345677 999999999998763
No 391
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=53.76 E-value=10 Score=34.34 Aligned_cols=19 Identities=32% Similarity=0.384 Sum_probs=16.0
Q ss_pred EEEEeeceecCCceEEecc
Q 020011 11 YLLEVHRILRPGGFWVLSG 29 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ 29 (332)
+|-|+-|+|+|||++|++.
T Consensus 209 ~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 209 LYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp HHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCeEEEEEe
Confidence 4567889999999999865
No 392
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=53.69 E-value=11 Score=32.02 Aligned_cols=20 Identities=40% Similarity=0.449 Sum_probs=16.5
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-++-|+|+|||++++..|
T Consensus 161 ~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 161 LLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp HHHHHGGGEEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCeEEEEEec
Confidence 45678899999999999654
No 393
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=53.57 E-value=2.1 Score=38.66 Aligned_cols=19 Identities=16% Similarity=0.072 Sum_probs=16.2
Q ss_pred EEEEeeceecCCceEEecc
Q 020011 11 YLLEVHRILRPGGFWVLSG 29 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ 29 (332)
.|-|+-|+|+|||+++++-
T Consensus 154 ~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 154 TLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp HHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEE
Confidence 4668889999999999873
No 394
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=53.47 E-value=43 Score=26.55 Aligned_cols=95 Identities=11% Similarity=0.063 Sum_probs=56.1
Q ss_pred CeEEEecCcc-h-HHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCccccccccccc--CCCCC-CccceeEehhhhccc
Q 020011 183 RNVMDMNTLY-G-GFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEA--FSTYP-RTYDLLHLDGLFTAE 256 (332)
Q Consensus 183 r~VLD~GCG~-G-gfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~--~~~yp-~sFDlVh~s~vf~h~ 256 (332)
.+|+=+|||. | .++..|.+.+. .|+.+|. ++.++.+.+.|....+.|-... +.... ..+|+|.+. .
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~---~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~-----~ 79 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDI---PLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILT-----I 79 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC---CEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEEC-----C
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEE-----C
Confidence 3588888875 3 24556666675 4555666 6777777777765444332111 11123 678887765 1
Q ss_pred cccCCHHHHHHHHHhhhcCCcEEEEEcChh
Q 020011 257 SHRCDMKFVLLEMDRILRPNGYVIVRESSY 286 (332)
Q Consensus 257 ~~~c~~~~iL~EmdRVLRPGG~lii~d~~~ 286 (332)
++. .....+..+.|-+.|+..++.+....
T Consensus 80 ~~~-~~n~~~~~~a~~~~~~~~iiar~~~~ 108 (140)
T 3fwz_A 80 PNG-YEAGEIVASARAKNPDIEIIARAHYD 108 (140)
T ss_dssp SCH-HHHHHHHHHHHHHCSSSEEEEEESSH
T ss_pred CCh-HHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 211 11224556778889999988877654
No 395
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=52.98 E-value=6.4 Score=36.88 Aligned_cols=93 Identities=12% Similarity=-0.003 Sum_probs=48.0
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccccc-cccccCCCCCCccceeEehhhhcccc
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTYH-DWCEAFSTYPRTYDLLHLDGLFTAES 257 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~-d~~e~~~~yp~sFDlVh~s~vf~h~~ 257 (332)
..+||-.|+|. |.+++.+++ .|..|+.+...+. .+.++.+.+-|....-. ++-+.+....+.||+|+..- .
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~-----g 255 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDAT-----G 255 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECC-----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECC-----C
Confidence 46899999832 334444443 4654433322220 14566666655421101 11011100014588877552 1
Q ss_pred ccCCHHHHH-HHHHhhhcCCcEEEEEc
Q 020011 258 HRCDMKFVL-LEMDRILRPNGYVIVRE 283 (332)
Q Consensus 258 ~~c~~~~iL-~EmdRVLRPGG~lii~d 283 (332)
. ...+ .+..+.|+|||.+++..
T Consensus 256 ~----~~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 256 A----DVNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp C----CTHHHHHHGGGEEEEEEEEECS
T ss_pred C----hHHHHHHHHHHHhcCCEEEEEe
Confidence 1 1256 88899999999998754
No 396
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=52.68 E-value=8 Score=36.55 Aligned_cols=97 Identities=16% Similarity=-0.036 Sum_probs=55.6
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccc-cccc---ccccCCC-CC-CccceeEehhh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIG-TYHD---WCEAFST-YP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig-~~~d---~~e~~~~-yp-~sFDlVh~s~v 252 (332)
..+||-+|||. |.++..|++ .|.. .|..++. ++.++++.+-|... .+.+ +.+.+.. .. +.||+|+-.--
T Consensus 186 g~~VlV~GaG~vG~~aiqlAk~~Ga~--~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G 263 (398)
T 1kol_A 186 GSTVYVAGAGPVGLAAAASARLLGAA--VVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVG 263 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCC
Confidence 56899999865 667777765 4552 1333444 66778888777521 1110 1111111 12 46898775421
Q ss_pred hc---------cccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 253 FT---------AESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 253 f~---------h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
-. |.+ .....+.+.-++|||||.+++..
T Consensus 264 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 264 FEARGHGHEGAKHE---APATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp TTCBCSSTTGGGSB---CTTHHHHHHHHHEEEEEEEEECS
T ss_pred Cccccccccccccc---chHHHHHHHHHHHhcCCEEEEec
Confidence 11 111 12357889999999999998753
No 397
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=52.45 E-value=13 Score=33.62 Aligned_cols=84 Identities=19% Similarity=0.138 Sum_probs=49.8
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccc--cc---cccccCCCCCCccceeEehhh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGT--YH---DWCEAFSTYPRTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~---d~~e~~~~yp~sFDlVh~s~v 252 (332)
..+||-.|+ |.|.+++.+++ .|..+ ..++. ++.++.+.+-|..-. +. ++.+.. +.||+|+. -
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~V---i~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~----~~~d~vid-~- 196 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRV---LAAASRPEKLALPLALGAEEAATYAEVPERAKAW----GGLDLVLE-V- 196 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEE---EEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT----TSEEEEEE-C-
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh----cCceEEEE-C-
Confidence 578999998 56767766654 46533 33444 555666666553211 11 111111 56887765 1
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. ..+.+.-+.|||||.+++..
T Consensus 197 ----g~-----~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 197 ----RG-----KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp ----SC-----TTHHHHHTTEEEEEEEEEC-
T ss_pred ----CH-----HHHHHHHHhhccCCEEEEEe
Confidence 11 25678889999999998743
No 398
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=52.24 E-value=4.4 Score=34.48 Aligned_cols=20 Identities=20% Similarity=0.371 Sum_probs=16.2
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|||||.++++-.
T Consensus 122 ~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 122 MLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp HHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEec
Confidence 45578899999999999643
No 399
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=52.23 E-value=59 Score=30.01 Aligned_cols=91 Identities=13% Similarity=0.001 Sum_probs=51.4
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc--hhhHHHHHhcCcccc--ccc-ccccCCC-CC--CccceeEeh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA--ANTLAVVYDRGLIGT--YHD-WCEAFST-YP--RTYDLLHLD 250 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~--~~~l~~a~eRGlig~--~~d-~~e~~~~-yp--~sFDlVh~s 250 (332)
..+||=.|+ |.|.++..|++ .|..++.++..+. .+.++.+.+-|.-.. +.+ +.+.+.. .. ..+|+|.-.
T Consensus 168 g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~ 247 (357)
T 1zsy_A 168 GDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNC 247 (357)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEES
T ss_pred CCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEEC
Confidence 568999997 57777777766 3664444443332 334567766664221 111 1111111 11 148877644
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEE
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVR 282 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~ 282 (332)
. .- ..+.+.-+.|||||.+++.
T Consensus 248 -----~----g~-~~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 248 -----V----GG-KSSTELLRQLARGGTMVTY 269 (357)
T ss_dssp -----S----CH-HHHHHHHTTSCTTCEEEEC
T ss_pred -----C----Cc-HHHHHHHHhhCCCCEEEEE
Confidence 1 11 2335678999999999885
No 400
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=52.16 E-value=2.3 Score=37.00 Aligned_cols=22 Identities=14% Similarity=0.182 Sum_probs=18.2
Q ss_pred EEEEEeeceecCCceEEeccCC
Q 020011 10 IYLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 10 ~~l~E~dRvLRpgGy~v~s~pp 31 (332)
.+|-|+-|+|+|||+++++.|-
T Consensus 121 ~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 121 ELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp HHHHHHHHHBCTTCCEEEEEEC
T ss_pred HHHHHHHHHcCCCcEEEEEeCC
Confidence 3566788999999999998764
No 401
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=52.00 E-value=27 Score=31.71 Aligned_cols=89 Identities=9% Similarity=-0.044 Sum_probs=50.6
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c--cccccCC-CC-CCccceeEehh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAFS-TY-PRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~~-~y-p~sFDlVh~s~ 251 (332)
.++||-.|+ |.|.+++.++. .|..+ ..++. ++.++.+.+-|..-.+ . ++.+.+. .. .+.+|+|+.+-
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~ 217 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKL---IGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSV 217 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEE---EEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEE---EEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECC
Confidence 578999994 56666655544 46533 33333 5556666654431111 1 1111111 11 24689887652
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
- ...+.+..+.|||||.+++..
T Consensus 218 g----------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 218 G----------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp C----------GGGHHHHHHTEEEEEEEEECC
T ss_pred c----------hHHHHHHHHHhcCCCEEEEEe
Confidence 1 246788889999999998754
No 402
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=50.98 E-value=2.7 Score=38.29 Aligned_cols=20 Identities=45% Similarity=0.780 Sum_probs=16.3
Q ss_pred EEEeeceecCCceEEeccCC
Q 020011 12 LLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~pp 31 (332)
|-++-|+|+|||++|++.+|
T Consensus 203 l~~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHHHHEEEEEEEEEECCC
T ss_pred HHHHHHHhCCCcEEEEecCC
Confidence 44566999999999998665
No 403
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=50.76 E-value=3.9 Score=33.77 Aligned_cols=18 Identities=17% Similarity=0.052 Sum_probs=14.1
Q ss_pred EEeeceecCCceEEeccC
Q 020011 13 LEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 13 ~E~dRvLRpgGy~v~s~p 30 (332)
-|+-|+|+|||+++++..
T Consensus 119 ~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 119 EKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp HHHHHHEEEEEEEEEEEC
T ss_pred HHHHHhcCCCcEEEEEEe
Confidence 355699999999988643
No 404
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=50.25 E-value=2.3 Score=36.06 Aligned_cols=21 Identities=24% Similarity=0.487 Sum_probs=17.5
Q ss_pred EEEeeceecCCceEEeccCCc
Q 020011 12 LLEVHRILRPGGFWVLSGPPV 32 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~ppv 32 (332)
|-|+-|+|+|||+++++.|.-
T Consensus 137 l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 137 IDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHcCCCCEEEEEecCC
Confidence 557789999999999987654
No 405
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=50.20 E-value=87 Score=31.18 Aligned_cols=31 Identities=16% Similarity=-0.012 Sum_probs=24.3
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA 214 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~ 214 (332)
.-+|+|+=||.||+...|.+.|..+ |..+|.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~--v~avE~ 118 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQC--VFTSEW 118 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEE--EEEECC
T ss_pred cceEEEecCCccHHHHHHHHCCCEE--EEEEeC
Confidence 4579999999999999999888643 344555
No 406
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=50.17 E-value=21 Score=37.00 Aligned_cols=62 Identities=18% Similarity=0.231 Sum_probs=40.4
Q ss_pred CccceeEehh----hhccccccCCHHH-----HHHHHHhhhcCCcEEEEEcC----hhHHHHHHHHHhcCcceeee
Q 020011 242 RTYDLLHLDG----LFTAESHRCDMKF-----VLLEMDRILRPNGYVIVRES----SYFIDAVATIAKGMKWSCHK 304 (332)
Q Consensus 242 ~sFDlVh~s~----vf~h~~~~c~~~~-----iL~EmdRVLRPGG~lii~d~----~~~~~~i~~i~~~l~W~~~~ 304 (332)
..||+|+++- -.||++ .|+=.. +-...-+.|+|||.+++..= ..--.-|..++++++-....
T Consensus 220 ~ryDlvfvn~~t~yr~HHyq-QCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~ 294 (670)
T 4gua_A 220 ARYDLVFINIGTKYRNHHFQ-QCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAA 294 (670)
T ss_dssp CCEEEEEECCCCCCCSCHHH-HHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEE
T ss_pred CcccEEEEecCCCcccchHH-HHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeee
Confidence 6899999862 456776 354333 33445689999999999761 11123466778887765443
No 407
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=50.14 E-value=13 Score=31.08 Aligned_cols=20 Identities=30% Similarity=0.388 Sum_probs=16.5
Q ss_pred EEEeeceecCCceEEeccCC
Q 020011 12 LLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~pp 31 (332)
|-++-|+|+|||.+|++.+.
T Consensus 125 l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 125 IDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp HHHHHHHCCTTCEEEEEECB
T ss_pred HHHHHHhcCCCeEEEEEecc
Confidence 34567899999999998775
No 408
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=49.44 E-value=8 Score=38.28 Aligned_cols=19 Identities=26% Similarity=0.648 Sum_probs=15.8
Q ss_pred EEEeeceecCCceEEeccC
Q 020011 12 LLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~p 30 (332)
|-|+-|+|||||+||.+--
T Consensus 307 L~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 307 FAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp HHHHGGGEEEEEEEEEECG
T ss_pred HHHHHHhcCCCeEEEEEec
Confidence 5578899999999999643
No 409
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=48.81 E-value=2.8 Score=36.48 Aligned_cols=19 Identities=26% Similarity=0.555 Sum_probs=16.6
Q ss_pred EEEeeceecCCceEEeccC
Q 020011 12 LLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~p 30 (332)
|-|+-|+|||||+++++-|
T Consensus 123 l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 123 EELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp HHHHTTSEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEecC
Confidence 5678899999999999865
No 410
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=48.66 E-value=15 Score=31.85 Aligned_cols=16 Identities=13% Similarity=0.231 Sum_probs=13.2
Q ss_pred EEeeceecCCceEEec
Q 020011 13 LEVHRILRPGGFWVLS 28 (332)
Q Consensus 13 ~E~dRvLRpgGy~v~s 28 (332)
-++-|+|+|||+|++.
T Consensus 158 ~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 158 ELCLPLVKKNGLFVAL 173 (240)
T ss_dssp HHHGGGEEEEEEEEEE
T ss_pred HHHHHhcCCCCEEEEE
Confidence 3456999999999986
No 411
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=48.57 E-value=30 Score=32.79 Aligned_cols=92 Identities=15% Similarity=0.066 Sum_probs=50.2
Q ss_pred CCeEEEecCcc-hHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc----ccccccCCC-CC-CccceeEehhh
Q 020011 182 IRNVMDMNTLY-GGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY----HDWCEAFST-YP-RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~-Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~----~d~~e~~~~-yp-~sFDlVh~s~v 252 (332)
..+||=+|+|. |.++..|++ .|.- .|+.++. ++.++.+.+-|.-..+ .++.+.... .. +.||+|+-.
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~-- 289 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGAS--KVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEA-- 289 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEEC--
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEEC--
Confidence 56788888854 555666655 4551 2344454 6677788777742221 111111111 12 578988754
Q ss_pred hccccccCCHHHHHHHHHhhh----cCCcEEEEEc
Q 020011 253 FTAESHRCDMKFVLLEMDRIL----RPNGYVIVRE 283 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVL----RPGG~lii~d 283 (332)
.. .....+..+.+.| ||||.+++..
T Consensus 290 ---~g---~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 290 ---TG---VPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp ---SS---CHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred ---CC---CcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 11 1122445555555 9999999864
No 412
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=48.47 E-value=2.4 Score=35.76 Aligned_cols=22 Identities=45% Similarity=0.684 Sum_probs=18.0
Q ss_pred EEEEeeceecCCceEEeccCCc
Q 020011 11 YLLEVHRILRPGGFWVLSGPPV 32 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv 32 (332)
+|-|+-|+|+|||+++++.|..
T Consensus 114 ~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 114 VLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp HHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHHcCCCCEEEEEecCC
Confidence 3457789999999999998753
No 413
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=48.36 E-value=2.8 Score=35.27 Aligned_cols=20 Identities=30% Similarity=0.492 Sum_probs=16.5
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||+++++.+
T Consensus 134 ~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 134 LLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp HHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHhCCCeEEEEEec
Confidence 34577899999999999765
No 414
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=48.16 E-value=2.5 Score=35.79 Aligned_cols=53 Identities=23% Similarity=0.217 Sum_probs=30.9
Q ss_pred EEEEeeceecCCceEEeccCCccccccc--cC-CC-CCHHHHHHHHHHHHHHHHhcc-cceeeee
Q 020011 11 YLLEVHRILRPGGFWVLSGPPVNYEHRW--RG-WN-TTIEEQRSDYKKLQDLLTSMC-FKLYAKK 70 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv~~~~~~--~~-~~-~~~~~~~~~~~~~~~l~~~~c-w~~~~~~ 70 (332)
+|-|+-|+|+|||+++++-++....... .. +. -+. +++.++.+.-- ++.+...
T Consensus 123 ~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 123 VLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSE-------EWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp HHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCH-------HHHHHHHHHHCCCSEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCH-------HHHHHHHHhCCCcEEEEEE
Confidence 4557789999999999986654221100 00 00 122 24666777776 7776544
No 415
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=48.04 E-value=54 Score=32.50 Aligned_cols=106 Identities=9% Similarity=0.020 Sum_probs=56.3
Q ss_pred CCCCeEEEecCcc--hHHHHHHhcCCCeEEEEeecCc-hh--------hHHHHHhcCcccc-----cccccccCCCCC--
Q 020011 180 DKIRNVMDMNTLY--GGFAAAVIDDPLWVMNVVSSYA-AN--------TLAVVYDRGLIGT-----YHDWCEAFSTYP-- 241 (332)
Q Consensus 180 ~~~r~VLD~GCG~--Ggfaa~L~~~~v~vmnv~p~d~-~~--------~l~~a~eRGlig~-----~~d~~e~~~~yp-- 241 (332)
..+++|-=+|+|+ +++|..|++.|. +|+-.|. ++ .++...++|.+.. ..+-......+.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~---~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~al 128 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGI---ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHKL 128 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGGC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC---eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHHH
Confidence 3467888899997 468888888886 3444454 22 2334445554311 000000001122
Q ss_pred CccceeEehhhhccccccCCH-HHHHHHHHhhhcCCcEEEEEcChhHHHHHHH
Q 020011 242 RTYDLLHLDGLFTAESHRCDM-KFVLLEMDRILRPNGYVIVRESSYFIDAVAT 293 (332)
Q Consensus 242 ~sFDlVh~s~vf~h~~~~c~~-~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~ 293 (332)
..-|+|+-. ++..-++ ..++.|+..+++||-.|+.....-.+..|.+
T Consensus 129 ~~aDlVIeA-----Vpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~ 176 (460)
T 3k6j_A 129 SNCDLIVES-----VIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISS 176 (460)
T ss_dssp TTCSEEEEC-----CCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHT
T ss_pred ccCCEEEEc-----CCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHH
Confidence 445665544 4322122 4688999999999887754333322344433
No 416
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=47.95 E-value=2.9 Score=36.39 Aligned_cols=18 Identities=28% Similarity=0.560 Sum_probs=15.2
Q ss_pred EEEeeceecCCceEEecc
Q 020011 12 LLEVHRILRPGGFWVLSG 29 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~ 29 (332)
|-|+-|+|||||+|++.-
T Consensus 153 l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 153 KNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHTHHHHEEEEEEEEECC
T ss_pred HHHHHHhcCCCeEEEEEe
Confidence 567889999999999754
No 417
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=47.91 E-value=14 Score=32.82 Aligned_cols=18 Identities=33% Similarity=0.386 Sum_probs=13.9
Q ss_pred EEeeceecCCceEEe-ccC
Q 020011 13 LEVHRILRPGGFWVL-SGP 30 (332)
Q Consensus 13 ~E~dRvLRpgGy~v~-s~p 30 (332)
-++-|+|+|||+|+. +|+
T Consensus 168 ~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 168 ELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp HHHGGGEEEEEEEEEEECS
T ss_pred HHHHHHcCCCeEEEEEeCC
Confidence 346799999998886 555
No 418
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=47.69 E-value=80 Score=27.82 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=57.7
Q ss_pred eEEEecCcc-h-HHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccc-cccccccCCCCCC-ccceeEehhhhccccc
Q 020011 184 NVMDMNTLY-G-GFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGT-YHDWCEAFSTYPR-TYDLLHLDGLFTAESH 258 (332)
Q Consensus 184 ~VLD~GCG~-G-gfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~-~~d~~e~~~~yp~-sFDlVh~s~vf~h~~~ 258 (332)
+|.=+|+|. | .++..|.+.+. ..+|...|. ++.++.+.+.|.... ..+..+. -. ..|+|+.. ++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~aDvVila-----vp~ 72 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINPESISKAVDLGIIDEGTTSIAKV----EDFSPDFVMLS-----SPV 72 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHHHHTTSCSEEESCGGGG----GGTCCSEEEEC-----SCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCC-CcEEEEEeCCHHHHHHHHHCCCcccccCCHHHH----hcCCCCEEEEc-----CCH
Confidence 566788875 3 35666776664 113455565 566666766675421 1111111 14 67877765 332
Q ss_pred cCCHHHHHHHHHhhhcCCcEEEEEc--ChhHHHHHHHHHh
Q 020011 259 RCDMKFVLLEMDRILRPNGYVIVRE--SSYFIDAVATIAK 296 (332)
Q Consensus 259 ~c~~~~iL~EmdRVLRPGG~lii~d--~~~~~~~i~~i~~ 296 (332)
.....++.++...|+||..++... .....+.+.+...
T Consensus 73 -~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~ 111 (281)
T 2g5c_A 73 -RTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG 111 (281)
T ss_dssp -HHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG
T ss_pred -HHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhcc
Confidence 234568888888899998666533 2334556666554
No 419
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=47.59 E-value=7.2 Score=33.24 Aligned_cols=20 Identities=25% Similarity=0.278 Sum_probs=16.4
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-++-|+|+|||.++++..
T Consensus 138 ~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 138 FLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp HHHHHHHHSCTTCEEEEEES
T ss_pred HHHHHHHHcCCCcEEEEEeC
Confidence 45567789999999999765
No 420
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=47.56 E-value=8.7 Score=32.90 Aligned_cols=20 Identities=20% Similarity=0.159 Sum_probs=16.7
Q ss_pred EEEeeceecCCceEEeccCC
Q 020011 12 LLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~pp 31 (332)
|-++-|+|||||.+|++...
T Consensus 137 l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 137 YDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp HHHHHHHSCTTCEEEEEECS
T ss_pred HHHHHHhcCCCcEEEEEecC
Confidence 44667899999999999874
No 421
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=47.14 E-value=42 Score=32.34 Aligned_cols=91 Identities=11% Similarity=0.055 Sum_probs=53.6
Q ss_pred CCCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCchhhHHHHHhcCccccc--cc--c-----------------ccc
Q 020011 181 KIRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYAANTLAVVYDRGLIGTY--HD--W-----------------CEA 236 (332)
Q Consensus 181 ~~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~~~~l~~a~eRGlig~~--~d--~-----------------~e~ 236 (332)
...+||=+|| |.|.++..+++ .|..++.++ ..++.++.+.+-|....+ .+ + .+.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~--~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVV--SSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEE--CCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 3578999997 56777766665 466444333 236677777776652221 10 0 000
Q ss_pred CC-CCC-CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 237 FS-TYP-RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 237 ~~-~yp-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. -.+ +.+|+|.-. . . ...+.+.-++|||||.+++..
T Consensus 306 i~~~t~g~g~Dvvid~-----~----G-~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 306 IRELTGGEDIDIVFEH-----P----G-RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHTSCCEEEEEEC-----S----C-HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHhCCCCCcEEEEc-----C----C-chhHHHHHHHhhCCcEEEEEe
Confidence 00 013 578877654 1 1 157788889999999999853
No 422
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=46.68 E-value=3.3 Score=36.00 Aligned_cols=19 Identities=37% Similarity=0.791 Sum_probs=15.5
Q ss_pred EEEeeceecCCceEEeccC
Q 020011 12 LLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~p 30 (332)
|-|+-|+|+|||++|++.+
T Consensus 181 l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 181 LRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHhhCCCCcEEEEEec
Confidence 3456799999999999864
No 423
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=46.36 E-value=2e+02 Score=31.33 Aligned_cols=32 Identities=9% Similarity=0.049 Sum_probs=23.9
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA 214 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~ 214 (332)
--+++|+=||.|||...|.+.|+.. .+..+|.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~-vv~avEi 571 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISD-TLWAIEM 571 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEE-EEEEECS
T ss_pred CCeEEEeccCccHHHHHHHHCCCCc-eEEEEEC
Confidence 3469999999999999998888621 1345555
No 424
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=46.25 E-value=2.8 Score=37.36 Aligned_cols=20 Identities=30% Similarity=0.637 Sum_probs=17.2
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||+++++-|
T Consensus 157 ~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 157 ALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEeC
Confidence 45578899999999999877
No 425
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=45.79 E-value=9.4 Score=33.93 Aligned_cols=19 Identities=32% Similarity=0.391 Sum_probs=15.8
Q ss_pred EEeeceecCCceEEeccCC
Q 020011 13 LEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 13 ~E~dRvLRpgGy~v~s~pp 31 (332)
-++-|+|+|||++++|+..
T Consensus 202 ~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 202 PRYREALVPGGRALLTGIL 220 (254)
T ss_dssp HHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEEEeec
Confidence 3566899999999999874
No 426
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=45.46 E-value=60 Score=31.00 Aligned_cols=90 Identities=16% Similarity=0.054 Sum_probs=52.3
Q ss_pred CCCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCchhhHHHHHhcCccccc--cc-----c---------------cc
Q 020011 181 KIRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYAANTLAVVYDRGLIGTY--HD-----W---------------CE 235 (332)
Q Consensus 181 ~~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~~~~l~~a~eRGlig~~--~d-----~---------------~e 235 (332)
...+||=.|| |.|.+++.+++ .|..++.+. ..++.++.+.+-|....+ .+ + .+
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~--~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV--SSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAK 297 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence 3578999997 45666666655 466443333 236667777766642211 10 0 00
Q ss_pred cC--CCCCCccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 236 AF--STYPRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 236 ~~--~~yp~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. .+ .+.+|+|.-.- . ...+.+.-+.|||||.+++..
T Consensus 298 ~v~~~~-g~g~Dvvid~~---------G-~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 298 LVVEKA-GREPDIVFEHT---------G-RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHH-SSCCSEEEECS---------C-HHHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHh-CCCceEEEECC---------C-chHHHHHHHHHhcCCEEEEEe
Confidence 00 01 35688876541 1 146778889999999999864
No 427
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=44.98 E-value=2.9 Score=37.43 Aligned_cols=20 Identities=30% Similarity=0.662 Sum_probs=16.6
Q ss_pred EEEeeceecCCceEEeccCC
Q 020011 12 LLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~pp 31 (332)
|-|+-|+|+|||+++++.+-
T Consensus 170 l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 170 FQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp HHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEEec
Confidence 45678999999999998763
No 428
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=44.97 E-value=3.2 Score=36.09 Aligned_cols=19 Identities=32% Similarity=0.539 Sum_probs=16.3
Q ss_pred EEEeeceecCCceEEeccC
Q 020011 12 LLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~p 30 (332)
|-|+-|+|+|||+++++.+
T Consensus 133 l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 133 MNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp HHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEEEe
Confidence 4577899999999999875
No 429
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=44.95 E-value=22 Score=32.60 Aligned_cols=90 Identities=11% Similarity=-0.044 Sum_probs=51.4
Q ss_pred CCeEEEecCcchH-HHHHHhc-C-CCeEEEEeecCc-hhhHHHHHhcCccccc--c--cccccC--CCCCCccceeEehh
Q 020011 182 IRNVMDMNTLYGG-FAAAVID-D-PLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAF--STYPRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GCG~Gg-faa~L~~-~-~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~--~~yp~sFDlVh~s~ 251 (332)
..+||=+|+|.++ +++.+++ . +. .|..++. ++.++.+.+-|..-.+ . ++.+.. .+-...+|++.-..
T Consensus 164 g~~VlV~GaG~~g~~a~~~a~~~~g~---~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~ 240 (348)
T 4eez_A 164 GDWQVIFGAGGLGNLAIQYAKNVFGA---KVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCA 240 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTSCC---EEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECC
T ss_pred CCEEEEEcCCCccHHHHHHHHHhCCC---EEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEec
Confidence 4678889998764 4544443 3 44 3445555 6667788777753222 1 111111 11224455444321
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.-...+...-+.|||||.+++..
T Consensus 241 ---------~~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 241 ---------VARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp ---------SCHHHHHHHHHTEEEEEEEEECC
T ss_pred ---------cCcchhheeheeecCCceEEEEe
Confidence 12357888889999999998865
No 430
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=44.70 E-value=22 Score=32.58 Aligned_cols=89 Identities=17% Similarity=0.076 Sum_probs=50.4
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccc--cc--cccccCC--CCCCccceeEehh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGT--YH--DWCEAFS--TYPRTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~--d~~e~~~--~yp~sFDlVh~s~ 251 (332)
.++||=.|+ |.|..++.++. .|..+ ..++. ++.++.+.+.|..-. +. ++.+.+. +-.+.+|+|+.+.
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V---i~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~ 222 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGATV---IGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSI 222 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTCEE---EEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECC
Confidence 578999995 66766655544 56533 33444 455666665453111 11 1111110 1124688877552
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. . ..+.+.-+.|||||.+++..
T Consensus 223 -----g---~--~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 223 -----G---K--DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp -----C---T--TTHHHHHHTEEEEEEEEECC
T ss_pred -----c---H--HHHHHHHHhhccCCEEEEEe
Confidence 1 1 35778889999999998764
No 431
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=44.52 E-value=35 Score=31.01 Aligned_cols=90 Identities=12% Similarity=-0.017 Sum_probs=50.4
Q ss_pred CCeEEEec-C-cchHHHHHHhc-CCCeEEEEeecCchhhHHHHHhcCccccccccccc-CCCCCCccceeEehhhhcccc
Q 020011 182 IRNVMDMN-T-LYGGFAAAVID-DPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWCEA-FSTYPRTYDLLHLDGLFTAES 257 (332)
Q Consensus 182 ~r~VLD~G-C-G~Ggfaa~L~~-~~v~vmnv~p~d~~~~l~~a~eRGlig~~~d~~e~-~~~yp~sFDlVh~s~vf~h~~ 257 (332)
..+||=.| + |.|.++..+++ .|..++. ++.++.++.+.+-|....+..-.+. +...-+.||+|.-. .
T Consensus 153 g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~---~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~-----~- 223 (321)
T 3tqh_A 153 GDVVLIHAGAGGVGHLAIQLAKQKGTTVIT---TASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDL-----V- 223 (321)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEE---EECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEES-----S-
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHcCCEEEE---EeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEEC-----C-
Confidence 56788886 3 45666666655 4664432 2343347777776653222100000 10011568887754 1
Q ss_pred ccCCHHHHHHHHHhhhcCCcEEEEEcC
Q 020011 258 HRCDMKFVLLEMDRILRPNGYVIVRES 284 (332)
Q Consensus 258 ~~c~~~~iL~EmdRVLRPGG~lii~d~ 284 (332)
.- ..+.+.-+.|||||.++....
T Consensus 224 ---g~-~~~~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 224 ---GG-DVGIQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp ---CH-HHHHHHGGGEEEEEEEEECCS
T ss_pred ---Cc-HHHHHHHHhccCCCEEEEeCC
Confidence 11 234888999999999998754
No 432
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=44.50 E-value=22 Score=29.33 Aligned_cols=20 Identities=15% Similarity=-0.071 Sum_probs=15.0
Q ss_pred EEEEeeceecCCce-EEeccC
Q 020011 11 YLLEVHRILRPGGF-WVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy-~v~s~p 30 (332)
+|-++-|+|+|||+ +++.-+
T Consensus 146 ~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 146 MAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHTCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHHHhcCCCeEEEEEEC
Confidence 34678899999999 655544
No 433
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=44.23 E-value=8.6 Score=33.10 Aligned_cols=20 Identities=15% Similarity=0.320 Sum_probs=16.4
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||+++++..
T Consensus 135 ~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 135 FLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp HHHHHHHHHTTSCEEEEEES
T ss_pred HHHHHHHHcCCCCEEEEEeC
Confidence 35567789999999999865
No 434
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=44.20 E-value=33 Score=31.64 Aligned_cols=89 Identities=17% Similarity=0.023 Sum_probs=52.5
Q ss_pred CCCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCchhhHHHHHhcCcccccc---cccccC--CCCCCccceeEehhh
Q 020011 181 KIRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYAANTLAVVYDRGLIGTYH---DWCEAF--STYPRTYDLLHLDGL 252 (332)
Q Consensus 181 ~~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~~~~l~~a~eRGlig~~~---d~~e~~--~~yp~sFDlVh~s~v 252 (332)
...+||=.|| |.|.+++.+++ .|..|+ .+..++.++.+.+.|... +. ++-+.. .+-.+.||+|+-.
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi---~~~~~~~~~~~~~lGa~~-i~~~~~~~~~~~~~~~~~g~D~vid~-- 223 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVF---ATARGSDLEYVRDLGATP-IDASREPEDYAAEHTAGQGFDLVYDT-- 223 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEE---EEECHHHHHHHHHHTSEE-EETTSCHHHHHHHHHTTSCEEEEEES--
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEE---EEeCHHHHHHHHHcCCCE-eccCCCHHHHHHHHhcCCCceEEEEC--
Confidence 3578999994 45666666655 466443 332355677777766532 11 110100 0112578987754
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.. ...+.+.-+.|+|||.+++..
T Consensus 224 ---~g-----~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 224 ---LG-----GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp ---SC-----THHHHHHHHHEEEEEEEEESC
T ss_pred ---CC-----cHHHHHHHHHHhcCCeEEEEc
Confidence 11 147888889999999999753
No 435
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=43.94 E-value=49 Score=29.14 Aligned_cols=98 Identities=9% Similarity=-0.121 Sum_probs=53.1
Q ss_pred eEEEecCcc-h-HHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCCCccceeEehhhhccccccC
Q 020011 184 NVMDMNTLY-G-GFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHRC 260 (332)
Q Consensus 184 ~VLD~GCG~-G-gfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~~c 260 (332)
+|.=+|+|. | .++..|.+ +.. |.-.+. ++.++.+.+.|+... . ....-...|+|+.. ++...
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~---V~~~~~~~~~~~~~~~~g~~~~-----~-~~~~~~~~D~vi~~-----v~~~~ 67 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFP---TLVWNRTFEKALRHQEEFGSEA-----V-PLERVAEARVIFTC-----LPTTR 67 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSC---EEEECSSTHHHHHHHHHHCCEE-----C-CGGGGGGCSEEEEC-----CSSHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCe---EEEEeCCHHHHHHHHHCCCccc-----C-HHHHHhCCCEEEEe-----CCChH
Confidence 466678886 3 35677777 763 333444 444444444443211 1 00001467887765 33222
Q ss_pred CHHHHHHHHHhhhcCCcEEEEEcC--hhHHHHHHHHHh
Q 020011 261 DMKFVLLEMDRILRPNGYVIVRES--SYFIDAVATIAK 296 (332)
Q Consensus 261 ~~~~iL~EmdRVLRPGG~lii~d~--~~~~~~i~~i~~ 296 (332)
.+..++.++...|+||..++.... ....+.+.+.+.
T Consensus 68 ~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~ 105 (289)
T 2cvz_A 68 EVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLR 105 (289)
T ss_dssp HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHH
Confidence 245677888888998887774332 233455666544
No 436
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=43.46 E-value=37 Score=31.75 Aligned_cols=95 Identities=11% Similarity=0.052 Sum_probs=54.9
Q ss_pred CeEEEecCcchHHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCc----ccccc-ccccc---CCCCCCccceeEehhhh
Q 020011 183 RNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGL----IGTYH-DWCEA---FSTYPRTYDLLHLDGLF 253 (332)
Q Consensus 183 r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGl----ig~~~-d~~e~---~~~yp~sFDlVh~s~vf 253 (332)
..+||+=+|+|.++..+..++- .++-+|. +...+.+.+.-- +-+++ |-.+. +.+-+..||+|+..==+
T Consensus 93 ~~~LDlfaGSGaLgiEaLS~~d---~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLRSQD---RLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSCCEEECHHHHHHHHSCTTS---EEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCceeEeCCcHHHHHHHcCCCC---eEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 4589999999999999888653 3344555 555555543311 11111 10111 12222569999998322
Q ss_pred ccccccCCHHHHHHHHHh--hhcCCcEEEEEc
Q 020011 254 TAESHRCDMKFVLLEMDR--ILRPNGYVIVRE 283 (332)
Q Consensus 254 ~h~~~~c~~~~iL~EmdR--VLRPGG~lii~d 283 (332)
+. ..+.+.++.-+.. .+-|+|++++==
T Consensus 170 e~---k~~~~~vl~~L~~~~~r~~~Gi~v~WY 198 (283)
T 2oo3_A 170 ER---KEEYKEIPYAIKNAYSKFSTGLYCVWY 198 (283)
T ss_dssp CS---TTHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CC---CcHHHHHHHHHHHhCccCCCeEEEEEE
Confidence 21 1245566655555 466999999844
No 437
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=43.40 E-value=3.2 Score=36.42 Aligned_cols=20 Identities=30% Similarity=0.569 Sum_probs=16.3
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|||||+++++.+
T Consensus 122 ~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 122 FVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEc
Confidence 45578899999999999743
No 438
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=43.13 E-value=4.5 Score=33.80 Aligned_cols=19 Identities=37% Similarity=0.674 Sum_probs=15.4
Q ss_pred EEEeeceecCCceEEeccC
Q 020011 12 LLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~p 30 (332)
|-++-|+|+|||+++++.+
T Consensus 114 l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 114 YPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp HHHHHTTCCSSEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEEe
Confidence 3456799999999999854
No 439
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=43.12 E-value=4.1 Score=35.95 Aligned_cols=19 Identities=32% Similarity=0.501 Sum_probs=16.4
Q ss_pred EEEeeceecCCceEEeccC
Q 020011 12 LLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~p 30 (332)
|-++-|+|+|||+++++.+
T Consensus 133 l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 133 LNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp HHHHGGGEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEEe
Confidence 4578899999999999876
No 440
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=43.09 E-value=15 Score=29.69 Aligned_cols=20 Identities=25% Similarity=0.416 Sum_probs=16.1
Q ss_pred EEEeeceecCCceEEeccCC
Q 020011 12 LLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~pp 31 (332)
|-++-|+|+|||+++++.+.
T Consensus 117 l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 117 LRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp HHHHHHTEEEEEEEEEEECB
T ss_pred HHHHHHhcCCCcEEEEEecC
Confidence 34567899999999998774
No 441
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=43.05 E-value=4.1 Score=35.37 Aligned_cols=20 Identities=25% Similarity=0.408 Sum_probs=17.0
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||+++++-|
T Consensus 114 ~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 114 VLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp HHHHHGGGEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCeEEEEEeC
Confidence 45678899999999999875
No 442
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=42.80 E-value=3.7 Score=35.49 Aligned_cols=20 Identities=15% Similarity=0.492 Sum_probs=16.6
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+.|+|+|||+++++.+
T Consensus 179 ~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 179 FFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCeEEEEEec
Confidence 35577899999999999864
No 443
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=42.77 E-value=3.7 Score=34.26 Aligned_cols=22 Identities=36% Similarity=0.545 Sum_probs=18.0
Q ss_pred EEEEEeeceecCCceEEeccCC
Q 020011 10 IYLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 10 ~~l~E~dRvLRpgGy~v~s~pp 31 (332)
.+|-|+-|+|+|||.+|++.+-
T Consensus 140 ~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 140 QVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHhCcCCCEEEEEeCC
Confidence 3456788999999999998763
No 444
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=42.73 E-value=6.4 Score=36.43 Aligned_cols=88 Identities=16% Similarity=0.021 Sum_probs=47.7
Q ss_pred CCCeEEEecCcc-hHHHHHHhc-CCC-eEEEEeecCchhhHHHHHhcCcccc----cc--cccccC--CCCCCccceeEe
Q 020011 181 KIRNVMDMNTLY-GGFAAAVID-DPL-WVMNVVSSYAANTLAVVYDRGLIGT----YH--DWCEAF--STYPRTYDLLHL 249 (332)
Q Consensus 181 ~~r~VLD~GCG~-Ggfaa~L~~-~~v-~vmnv~p~d~~~~l~~a~eRGlig~----~~--d~~e~~--~~yp~sFDlVh~ 249 (332)
...+||-.|+|. |.+++.|++ .|. .|+.+... ++.++.+.+ + .. +. ++.+.. .+ .+.||+|+-
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~--~~~~~~~~~--l-a~~v~~~~~~~~~~~~~~~~-~~g~D~vid 237 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPN--PYRLAFARP--Y-ADRLVNPLEEDLLEVVRRVT-GSGVEVLLE 237 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSC--HHHHGGGTT--T-CSEEECTTTSCHHHHHHHHH-SSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC--HHHHHHHHH--h-HHhccCcCccCHHHHHHHhc-CCCCCEEEE
Confidence 357899999853 555555554 455 44333222 344444432 2 21 11 111110 01 346888765
Q ss_pred hhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 250 DGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 250 s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
.- .-...+.+.-+.|||||.+++..
T Consensus 238 ~~---------g~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 238 FS---------GNEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp CS---------CCHHHHHHHHHHEEEEEEEEECC
T ss_pred CC---------CCHHHHHHHHHHHhcCCEEEEEe
Confidence 41 11357888999999999998754
No 445
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=42.64 E-value=3.3 Score=35.93 Aligned_cols=20 Identities=15% Similarity=0.340 Sum_probs=16.6
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||+++++.+
T Consensus 141 ~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 141 LFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEe
Confidence 34577899999999999865
No 446
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=42.62 E-value=3.2 Score=36.33 Aligned_cols=22 Identities=18% Similarity=0.203 Sum_probs=17.8
Q ss_pred EEEEeeceecCCceEEeccCCc
Q 020011 11 YLLEVHRILRPGGFWVLSGPPV 32 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv 32 (332)
+|-|+-|+|+|||+|+++...-
T Consensus 132 ~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 132 FAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp HHHHHHHHEEEEEEEEEEESCH
T ss_pred HHHHHHHHcCCCcEEEEEeCCH
Confidence 4557779999999999987643
No 447
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=42.50 E-value=4 Score=34.20 Aligned_cols=54 Identities=13% Similarity=0.079 Sum_probs=31.8
Q ss_pred EEEEeeceecCCceEEeccCCccccccccC-----CCCCHHHHHHHHHHHHHHHHhcccceeeeec
Q 020011 11 YLLEVHRILRPGGFWVLSGPPVNYEHRWRG-----WNTTIEEQRSDYKKLQDLLTSMCFKLYAKKD 71 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~cw~~~~~~~ 71 (332)
+|-|+-|+|+|||+++++-+.......+.. +..+. +++.++.+..-++.+....
T Consensus 123 ~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 123 ALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPL-------PELAQALETAGFQVTSSHW 181 (203)
T ss_dssp HHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCH-------HHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCH-------HHHHHHHHHCCCcEEEEEe
Confidence 455678999999999997543211000000 11222 2466678888888776554
No 448
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=42.43 E-value=3.8 Score=35.13 Aligned_cols=20 Identities=15% Similarity=0.263 Sum_probs=16.6
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||+++++-+
T Consensus 130 ~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 130 LYKRSYSILKESGIFINADL 149 (234)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEEe
Confidence 46678899999999998753
No 449
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=42.37 E-value=20 Score=33.15 Aligned_cols=88 Identities=11% Similarity=0.104 Sum_probs=48.9
Q ss_pred CeEEEecC--cchHHHHHHhc-CCC-eEEEEeecCc-hhhHHHHHh-cCccc--ccc--cccccCCC-CCCccceeEehh
Q 020011 183 RNVMDMNT--LYGGFAAAVID-DPL-WVMNVVSSYA-ANTLAVVYD-RGLIG--TYH--DWCEAFST-YPRTYDLLHLDG 251 (332)
Q Consensus 183 r~VLD~GC--G~Ggfaa~L~~-~~v-~vmnv~p~d~-~~~l~~a~e-RGlig--~~~--d~~e~~~~-yp~sFDlVh~s~ 251 (332)
++||-.|| |.|.+++.++. .|. .++ .++. ++.++.+.+ -|..- .+. ++.+.+.. ..+.+|+|+.+-
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi---~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~ 238 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVV---GICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNV 238 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEE---EEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEE---EEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEECC
Confidence 78999998 55655555544 565 443 2333 445566654 34311 111 11111110 113588776551
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
. ...+.+.-+.|||||.+++..
T Consensus 239 ---------G-~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 239 ---------G-GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp ---------C-HHHHHHHHHTEEEEEEEEECC
T ss_pred ---------C-HHHHHHHHHHhccCcEEEEEC
Confidence 1 257888899999999998753
No 450
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=42.33 E-value=4.2 Score=34.79 Aligned_cols=17 Identities=12% Similarity=0.237 Sum_probs=12.8
Q ss_pred EEEEeeceecCCceEEe
Q 020011 11 YLLEVHRILRPGGFWVL 27 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~ 27 (332)
+|-|+-|+|||||++++
T Consensus 122 ~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 122 YVQHLEALMPQACSGLL 138 (203)
T ss_dssp HHHHHHHHSCSEEEEEE
T ss_pred HHHHHHHHcCCCcEEEE
Confidence 35578899999998333
No 451
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=42.30 E-value=3.4 Score=36.43 Aligned_cols=20 Identities=30% Similarity=0.708 Sum_probs=16.8
Q ss_pred EEEeeceecCCceEEeccCC
Q 020011 12 LLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~pp 31 (332)
|-|+-|+|||||.++++.|-
T Consensus 161 l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 161 AEELARVVKPGGWVITATPG 180 (269)
T ss_dssp HHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEEEcC
Confidence 45778999999999998763
No 452
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=41.51 E-value=6.3 Score=33.59 Aligned_cols=17 Identities=12% Similarity=0.216 Sum_probs=14.8
Q ss_pred eceecCCceEEeccCCc
Q 020011 16 HRILRPGGFWVLSGPPV 32 (332)
Q Consensus 16 dRvLRpgGy~v~s~ppv 32 (332)
-|+|+|||+++++..+-
T Consensus 150 ~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 150 NNWLKPNALIYVETEKD 166 (201)
T ss_dssp TTCEEEEEEEEEEEESS
T ss_pred cCccCCCcEEEEEECCC
Confidence 57899999999988765
No 453
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=41.40 E-value=3.7 Score=36.33 Aligned_cols=21 Identities=33% Similarity=0.793 Sum_probs=17.3
Q ss_pred EEEEeeceecCCceEEeccCC
Q 020011 11 YLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~pp 31 (332)
+|-|+-|+|+|||++|++.|-
T Consensus 156 ~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 156 AQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp HHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCEEEEEECC
Confidence 345678999999999998873
No 454
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=41.36 E-value=48 Score=30.67 Aligned_cols=89 Identities=13% Similarity=-0.037 Sum_probs=50.1
Q ss_pred CCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccc--cc--cccccCC-CCC-CccceeEehh
Q 020011 182 IRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGT--YH--DWCEAFS-TYP-RTYDLLHLDG 251 (332)
Q Consensus 182 ~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~--~~--d~~e~~~-~yp-~sFDlVh~s~ 251 (332)
..+||-.|+ |.|.+++.++. .|.. |..++. ++.++.+.+.|..-. +. ++.+.+. ... +.+|+|+.+-
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~---Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 239 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAI---PLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCI 239 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCE---EEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECC
Confidence 578999984 56666655544 5653 333443 556666655553211 11 1111111 123 5689877552
Q ss_pred hhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 252 LFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 252 vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
- . ..+.+.-++|||||.+++..
T Consensus 240 G-----~-----~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 240 G-----G-----SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp C-----G-----GGHHHHHHHEEEEEEEEECC
T ss_pred C-----c-----hHHHHHHHhccCCCEEEEEe
Confidence 1 1 25677789999999999854
No 455
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=41.13 E-value=1e+02 Score=23.91 Aligned_cols=93 Identities=16% Similarity=0.242 Sum_probs=50.3
Q ss_pred CeEEEecCcch--HHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCccccccccccc--CCCCC-CccceeEehhhhccc
Q 020011 183 RNVMDMNTLYG--GFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEA--FSTYP-RTYDLLHLDGLFTAE 256 (332)
Q Consensus 183 r~VLD~GCG~G--gfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~--~~~yp-~sFDlVh~s~vf~h~ 256 (332)
.+|+=+|||.= .++..|.+.|. .|+.+|. ++.++.+.+.|......|..+. +.... ..+|+|.+.-
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~---~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~----- 78 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGK---KVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITG----- 78 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECC-----
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC---eEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEec-----
Confidence 46888998752 24556666676 3444555 6667777677754333332221 11123 5688777651
Q ss_pred cccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 257 SHRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 257 ~~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
++ ......+.+..|-+. .+.++.+...
T Consensus 79 ~~-~~~n~~~~~~a~~~~-~~~iia~~~~ 105 (141)
T 3llv_A 79 SD-DEFNLKILKALRSVS-DVYAIVRVSS 105 (141)
T ss_dssp SC-HHHHHHHHHHHHHHC-CCCEEEEESC
T ss_pred CC-HHHHHHHHHHHHHhC-CceEEEEEcC
Confidence 11 112235556666666 6666665544
No 456
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=40.99 E-value=20 Score=32.88 Aligned_cols=91 Identities=13% Similarity=0.020 Sum_probs=51.6
Q ss_pred CCeEEEecCcchH-HHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCcccccc--c--ccccC--CCCCCccceeEehhh
Q 020011 182 IRNVMDMNTLYGG-FAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTYH--D--WCEAF--STYPRTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~Gg-faa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~--d--~~e~~--~~yp~sFDlVh~s~v 252 (332)
..+||=.|||..| +++.+++ .+..++ +.++. ++.++.+++-|..-.+. + .-+.. .+-.+.+|+|...
T Consensus 161 g~~VlV~GaG~vG~~aiq~ak~~G~~~v--i~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~-- 236 (346)
T 4a2c_A 161 NKNVIIIGAGTIGLLAIQCAVALGAKSV--TAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILET-- 236 (346)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEE--EEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEEC--
T ss_pred CCEEEEECCCCcchHHHHHHHHcCCcEE--EEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccccccc--
Confidence 5678889997655 4444443 454332 33344 56778888777532221 0 00000 0111556766543
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
......+...-++|||||.+++..
T Consensus 237 -------~G~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 237 -------AGVPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp -------SCSHHHHHHHHHHCCTTCEEEECC
T ss_pred -------ccccchhhhhhheecCCeEEEEEe
Confidence 112457788889999999999865
No 457
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=40.77 E-value=4.2 Score=33.99 Aligned_cols=20 Identities=35% Similarity=0.524 Sum_probs=16.2
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||+++++.+
T Consensus 130 ~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 130 AFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHhCCCCCEEEEEec
Confidence 34577899999999999753
No 458
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=40.64 E-value=4.1 Score=37.02 Aligned_cols=22 Identities=27% Similarity=0.620 Sum_probs=18.0
Q ss_pred EEEEEeeceecCCceEEeccCC
Q 020011 10 IYLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 10 ~~l~E~dRvLRpgGy~v~s~pp 31 (332)
.+|-|+-|+|+|||+|+.+-|-
T Consensus 136 ~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 136 MMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp HHHHHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHhCCCcEEEEecCC
Confidence 3456788999999999998773
No 459
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=40.46 E-value=56 Score=29.33 Aligned_cols=92 Identities=11% Similarity=-0.029 Sum_probs=48.9
Q ss_pred CCeEEEecCcch--HHHHHHhcCCCeEEEEeecCc-hhhHHHHHhc-----------C--cccc-cc---cccccCCCCC
Q 020011 182 IRNVMDMNTLYG--GFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR-----------G--LIGT-YH---DWCEAFSTYP 241 (332)
Q Consensus 182 ~r~VLD~GCG~G--gfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eR-----------G--lig~-~~---d~~e~~~~yp 241 (332)
+++|.=+|+|.= ++|..|+..|. +|.-.|. ++.++.+.++ | +... .. .-......+.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~---~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGF---AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHH
Confidence 467777898862 46677777786 4455555 5555544443 1 1100 00 0000001111
Q ss_pred ---CccceeEehhhhcccccc-CCHHHHHHHHHhhhcCCcEEEE
Q 020011 242 ---RTYDLLHLDGLFTAESHR-CDMKFVLLEMDRILRPNGYVIV 281 (332)
Q Consensus 242 ---~sFDlVh~s~vf~h~~~~-c~~~~iL~EmdRVLRPGG~lii 281 (332)
...|+|+.. ++.. .....++.++...++|+..++-
T Consensus 81 ~~~~~aDlVi~a-----v~~~~~~~~~v~~~l~~~~~~~~il~s 119 (283)
T 4e12_A 81 QAVKDADLVIEA-----VPESLDLKRDIYTKLGELAPAKTIFAT 119 (283)
T ss_dssp HHTTTCSEEEEC-----CCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHhccCCEEEEe-----ccCcHHHHHHHHHHHHhhCCCCcEEEE
Confidence 345766654 3321 1235688999999999877653
No 460
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=40.34 E-value=1.1e+02 Score=23.14 Aligned_cols=100 Identities=7% Similarity=-0.012 Sum_probs=48.5
Q ss_pred CeEEEecCcchH--HHHHHhcCCCeEEEEeecCc-hhhHHHHHhc-Ccccccccccc--cCCCCC-CccceeEehhhhcc
Q 020011 183 RNVMDMNTLYGG--FAAAVIDDPLWVMNVVSSYA-ANTLAVVYDR-GLIGTYHDWCE--AFSTYP-RTYDLLHLDGLFTA 255 (332)
Q Consensus 183 r~VLD~GCG~Gg--faa~L~~~~v~vmnv~p~d~-~~~l~~a~eR-Glig~~~d~~e--~~~~yp-~sFDlVh~s~vf~h 255 (332)
.+|+=+|+|.=| ++..|.+.+. +|+-+|. ++.++.+.+. |......|..+ .+.... ..+|+|...-
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~---~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~---- 77 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH---DIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT---- 77 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC---eEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee----
Confidence 467888887643 4566667775 3344444 4445444433 43211111111 011112 5678776651
Q ss_pred ccccCCHHHHHHHHHhhhcCCcEEEEEcChhHHHHH
Q 020011 256 ESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAV 291 (332)
Q Consensus 256 ~~~~c~~~~iL~EmdRVLRPGG~lii~d~~~~~~~i 291 (332)
++ ......+.++.|-+.++-.++........+.+
T Consensus 78 -~~-~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l 111 (140)
T 1lss_A 78 -GK-EEVNLMSSLLAKSYGINKTIARISEIEYKDVF 111 (140)
T ss_dssp -SC-HHHHHHHHHHHHHTTCCCEEEECSSTTHHHHH
T ss_pred -CC-chHHHHHHHHHHHcCCCEEEEEecCHhHHHHH
Confidence 11 12234566777778887554444444443333
No 461
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=40.31 E-value=3.8 Score=36.46 Aligned_cols=20 Identities=25% Similarity=0.429 Sum_probs=16.9
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|||||+++++-+
T Consensus 136 ~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 136 AIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEec
Confidence 45678899999999999765
No 462
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=40.01 E-value=5.6 Score=36.13 Aligned_cols=21 Identities=14% Similarity=0.284 Sum_probs=16.9
Q ss_pred EEEEeeceecCCceEEeccCC
Q 020011 11 YLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~pp 31 (332)
+|-|+-|+|+|||+++++-..
T Consensus 178 ~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 178 VVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHHHHHHHSCTTCEEEEEEEB
T ss_pred HHHHHHHhCCCCcEEEEEEec
Confidence 455788999999999998653
No 463
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=39.99 E-value=27 Score=33.65 Aligned_cols=42 Identities=19% Similarity=0.113 Sum_probs=28.0
Q ss_pred CCCeEEEecCcchHHHHHHh-c-CC--CeEEEEeecCc-hhhHHHHH
Q 020011 181 KIRNVMDMNTLYGGFAAAVI-D-DP--LWVMNVVSSYA-ANTLAVVY 222 (332)
Q Consensus 181 ~~r~VLD~GCG~Ggfaa~L~-~-~~--v~vmnv~p~d~-~~~l~~a~ 222 (332)
....|+|+||+.|.++..++ . .+ ..|..+.|... -+.+....
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~ 272 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVL 272 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHH
Confidence 45789999999999988776 2 22 35666776655 34444333
No 464
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=39.76 E-value=32 Score=33.43 Aligned_cols=76 Identities=14% Similarity=0.212 Sum_probs=41.3
Q ss_pred CCeEEEecCcchHHHHHHhcC----C--CeEEEEeecCchhhHHHHHhcCcccc-cccccccCCCCCCccceeEehhhhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDD----P--LWVMNVVSSYAANTLAVVYDRGLIGT-YHDWCEAFSTYPRTYDLLHLDGLFT 254 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~----~--v~vmnv~p~d~~~~l~~a~eRGlig~-~~d~~e~~~~yp~sFDlVh~s~vf~ 254 (332)
.-.|+++|+|.|.+++.+.+. + .-.+.+.-++....+......-|-+. --.|++++...|...=+|.++.+|.
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~v~W~~~l~~lp~~~~~viANE~fD 160 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHDSFEDVPEGPAVILANEYFD 160 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEESSGGGSCCSSEEEEEESSGG
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCCCeEEeCChhhcCCCCeEEEeccccc
Confidence 346999999999998877541 1 01123333444222222222222111 1247776656664466888888886
Q ss_pred ccc
Q 020011 255 AES 257 (332)
Q Consensus 255 h~~ 257 (332)
-+|
T Consensus 161 AlP 163 (387)
T 1zkd_A 161 VLP 163 (387)
T ss_dssp GSC
T ss_pred cCc
Confidence 544
No 465
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=39.37 E-value=5.1 Score=35.65 Aligned_cols=21 Identities=24% Similarity=0.430 Sum_probs=17.3
Q ss_pred EEEEeeceecCCceEEeccCC
Q 020011 11 YLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~pp 31 (332)
+|-|+-|+|+|||.++++.+-
T Consensus 150 ~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 150 FFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp HHHHHHHHSCTTCEEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEEEec
Confidence 456778999999999998764
No 466
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=39.20 E-value=5.2 Score=33.65 Aligned_cols=20 Identities=20% Similarity=0.321 Sum_probs=16.8
Q ss_pred EEEeeceecCCceEEeccCC
Q 020011 12 LLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~pp 31 (332)
|-|+-|+|+|||+++++-|.
T Consensus 113 l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 113 IEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp HHHTGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHcCCCCEEEEEeCC
Confidence 45678999999999998764
No 467
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=39.15 E-value=4 Score=35.49 Aligned_cols=19 Identities=21% Similarity=0.212 Sum_probs=15.8
Q ss_pred EEEeeceecCCceEEeccC
Q 020011 12 LLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~p 30 (332)
|-|+-|+|+|||+++++-+
T Consensus 128 l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 128 CKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEEeC
Confidence 4467899999999999854
No 468
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=39.08 E-value=4.6 Score=33.79 Aligned_cols=19 Identities=32% Similarity=0.632 Sum_probs=15.2
Q ss_pred EEEeeceecCCceEEeccC
Q 020011 12 LLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~p 30 (332)
|-|+-|+|+|||+++++-+
T Consensus 111 l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 111 IDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEEEe
Confidence 3466799999999998754
No 469
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=39.03 E-value=86 Score=30.61 Aligned_cols=105 Identities=18% Similarity=0.179 Sum_probs=54.5
Q ss_pred CCCeEEEecCcc-h-HHHHHHhcCCCeEEEEeecCc-hhhHHHHHh-----------cCccccc-c-c-ccccCCCCC--
Q 020011 181 KIRNVMDMNTLY-G-GFAAAVIDDPLWVMNVVSSYA-ANTLAVVYD-----------RGLIGTY-H-D-WCEAFSTYP-- 241 (332)
Q Consensus 181 ~~r~VLD~GCG~-G-gfaa~L~~~~v~vmnv~p~d~-~~~l~~a~e-----------RGlig~~-~-d-~~e~~~~yp-- 241 (332)
.+.+|.=+|+|. | ++|..|++.|. +|+-+|. ++.++.+.+ +|.+... . . .......+.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~---~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 112 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGI---SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKEL 112 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHH
Confidence 467799999997 3 57788888886 4444555 444444332 2211000 0 0 000001112
Q ss_pred CccceeEehhhhccccccCC-HHHHHHHHHhhhcCCcEEEEEcChhHHHHHHH
Q 020011 242 RTYDLLHLDGLFTAESHRCD-MKFVLLEMDRILRPNGYVIVRESSYFIDAVAT 293 (332)
Q Consensus 242 ~sFDlVh~s~vf~h~~~~c~-~~~iL~EmdRVLRPGG~lii~d~~~~~~~i~~ 293 (332)
...|+|+.. ++.... ...++.++..+++||-.|+.+...-.+..+.+
T Consensus 113 ~~aDlVIea-----Vpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~ 160 (463)
T 1zcj_A 113 STVDLVVEA-----VFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS 160 (463)
T ss_dssp TTCSEEEEC-----CCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT
T ss_pred CCCCEEEEc-----CCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHH
Confidence 456666654 332111 24688999999999877665332222344444
No 470
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=38.99 E-value=4.5 Score=34.27 Aligned_cols=22 Identities=32% Similarity=0.526 Sum_probs=17.3
Q ss_pred EEEEeeceecCCceEEeccCCc
Q 020011 11 YLLEVHRILRPGGFWVLSGPPV 32 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv 32 (332)
+|-|+-|+|||||+++++.+..
T Consensus 123 ~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 123 IIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp HHHHHHHHEEEEEEEEEEEEBC
T ss_pred HHHHHHHHcCCCeEEEEEECCc
Confidence 4556779999999999986543
No 471
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=38.65 E-value=6.3 Score=31.90 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=17.4
Q ss_pred EEEEeeceecCCceEEeccCC
Q 020011 11 YLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~pp 31 (332)
+|-++-|+|+|||+++++...
T Consensus 109 ~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 109 VFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp HHHHHHHTCCTTCEEEEEECS
T ss_pred HHHHHHHhcCCCCEEEEEeec
Confidence 355677899999999998874
No 472
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=38.47 E-value=5.7 Score=35.78 Aligned_cols=22 Identities=9% Similarity=0.126 Sum_probs=18.0
Q ss_pred EEEEEeeceecCCceEEeccCC
Q 020011 10 IYLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 10 ~~l~E~dRvLRpgGy~v~s~pp 31 (332)
.+|-|+-|+|+|||.++++.+-
T Consensus 164 ~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 164 TFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp HHHHHHHHSSCTTCEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEEEe
Confidence 4566888999999999997653
No 473
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=38.22 E-value=5.1 Score=35.11 Aligned_cols=18 Identities=22% Similarity=0.237 Sum_probs=15.2
Q ss_pred EEEEeeceecCCceEEec
Q 020011 11 YLLEVHRILRPGGFWVLS 28 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s 28 (332)
+|-++-|+|+|||++|++
T Consensus 133 ~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 133 ALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp HHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHhcCCCcEEEEE
Confidence 355678999999999997
No 474
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=38.15 E-value=21 Score=33.46 Aligned_cols=40 Identities=18% Similarity=0.054 Sum_probs=30.8
Q ss_pred CCeEEEecCcchHHHHHHhcCCCeEEEEeecCc-h---hhHHHHHhc
Q 020011 182 IRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYA-A---NTLAVVYDR 224 (332)
Q Consensus 182 ~r~VLD~GCG~Ggfaa~L~~~~v~vmnv~p~d~-~---~~l~~a~eR 224 (332)
...|||.=||.|+++.+-.+.|. ...+++. + ...+++.+|
T Consensus 243 ~~~vlDpF~GsGtt~~aa~~~~r---~~ig~e~~~~~~~~~~~~~~R 286 (319)
T 1eg2_A 243 GSTVLDFFAGSGVTARVAIQEGR---NSICTDAAPVFKEYYQKQLTF 286 (319)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTC---EEEEEESSTHHHHHHHHHHHH
T ss_pred CCEEEecCCCCCHHHHHHHHcCC---cEEEEECCccHHHHHHHHHHH
Confidence 45799999999998877766665 4456666 6 778888887
No 475
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=38.10 E-value=14 Score=34.03 Aligned_cols=57 Identities=18% Similarity=-0.042 Sum_probs=37.9
Q ss_pred CC-CccceeEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEcC-----hhHHHHHHHHHhcCcce
Q 020011 240 YP-RTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRES-----SYFIDAVATIAKGMKWS 301 (332)
Q Consensus 240 yp-~sFDlVh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d~-----~~~~~~i~~i~~~l~W~ 301 (332)
.| .+||+||...= ++. ....++..+...|+|||++++.|- ...-..+.++...-.-+
T Consensus 178 ~~~~~~dlv~ID~D--~Y~---~t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~~~A~~ef~~~~~~~ 240 (257)
T 3tos_A 178 NPQTVIALAYFDLD--LYE---PTKAVLEAIRPYLTKGSIVAFDELDNPKWPGENIAMRKVLGLDHAP 240 (257)
T ss_dssp CTTCCEEEEEECCC--CHH---HHHHHHHHHGGGEEEEEEEEESSTTCTTCTHHHHHHHHHTCTTSSC
T ss_pred CCCCceEEEEEcCc--ccc---hHHHHHHHHHHHhCCCcEEEEcCCCCCCChHHHHHHHHHHhhCCCe
Confidence 46 68999999842 111 123578888899999999999884 24455566665544333
No 476
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=37.90 E-value=7.3 Score=33.28 Aligned_cols=15 Identities=40% Similarity=0.459 Sum_probs=12.2
Q ss_pred EeeceecCCceEEec
Q 020011 14 EVHRILRPGGFWVLS 28 (332)
Q Consensus 14 E~dRvLRpgGy~v~s 28 (332)
++-|+|||||.||..
T Consensus 124 ~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 124 IAVRYLRNGGNVLLK 138 (191)
T ss_dssp HHHHHEEEEEEEEEE
T ss_pred HHHHHccCCCEEEEE
Confidence 346899999999964
No 477
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=37.74 E-value=23 Score=28.51 Aligned_cols=22 Identities=14% Similarity=0.042 Sum_probs=17.6
Q ss_pred EEEEeeceecCCceEEeccCCc
Q 020011 11 YLLEVHRILRPGGFWVLSGPPV 32 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv 32 (332)
+|-++-|+|+|||+++++.+..
T Consensus 139 ~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 139 IIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp HHHHHHHHEEEEEEEEEEEEST
T ss_pred HHHHHHHHcCCCCEEEEEECCC
Confidence 3456678999999999998753
No 478
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=37.58 E-value=4.7 Score=35.91 Aligned_cols=20 Identities=35% Similarity=0.456 Sum_probs=17.0
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||+++++-+
T Consensus 155 ~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 155 VLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp HHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEEe
Confidence 45678899999999999866
No 479
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=37.32 E-value=4.5 Score=35.07 Aligned_cols=53 Identities=17% Similarity=0.287 Sum_probs=29.8
Q ss_pred EEEEeeceecCCceEEeccCCcc----ccccccCCCCCHHHHHHHHHHHHHHHHhcccceeeee
Q 020011 11 YLLEVHRILRPGGFWVLSGPPVN----YEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKK 70 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ppv~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~cw~~~~~~ 70 (332)
+|-|+-|+|+|||++|++.+-.. |......+.++.+ ++.++.+..-++.+...
T Consensus 167 ~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 167 FLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLD-------VVRRIICSAGLSLLAEE 223 (241)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHH-------HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHH-------HHHHHHHHcCCeEEEee
Confidence 45567899999999999754221 1111111223333 35556666667666443
No 480
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=36.92 E-value=4.6 Score=35.57 Aligned_cols=21 Identities=24% Similarity=0.496 Sum_probs=17.3
Q ss_pred EEEeeceecCCceEEeccCCc
Q 020011 12 LLEVHRILRPGGFWVLSGPPV 32 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~ppv 32 (332)
|-|+-|+|+|||+++++.+..
T Consensus 135 l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 135 FSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHHHHHHEEEEEEEEEEEEBH
T ss_pred HHHHHHHcCCCeEEEEEeCCh
Confidence 456789999999999987753
No 481
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=36.76 E-value=1.1e+02 Score=27.85 Aligned_cols=105 Identities=14% Similarity=0.029 Sum_probs=58.7
Q ss_pred CCeEEEecCcch--HHHHHHhcCCCeEEEEeecCchhhHHHHHhcCccccccc--cc---ccCCCCC--CccceeEehhh
Q 020011 182 IRNVMDMNTLYG--GFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHD--WC---EAFSTYP--RTYDLLHLDGL 252 (332)
Q Consensus 182 ~r~VLD~GCG~G--gfaa~L~~~~v~vmnv~p~d~~~~l~~a~eRGlig~~~d--~~---e~~~~yp--~sFDlVh~s~v 252 (332)
..+|.=+|+|.= .+|..|++.|.-| .+. .+ ++.++.+.+.|+.-...+ .. ....... ..+|+|...
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V-~l~-~~-~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~vila-- 93 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEV-ILI-AR-PQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQGADLVLFC-- 93 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEE-EEE-CC-HHHHHHHHHHCEEEECSSCEEEECCEEESCGGGGTTCSEEEEC--
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeE-EEE-Ec-HhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHcCCCCEEEEE--
Confidence 457888899853 3667777777533 233 22 556777777775321100 00 0001111 568887765
Q ss_pred hccccccCCHHHHHHHHHhhhcCCcEEEEE-cChhHHHHHHHHH
Q 020011 253 FTAESHRCDMKFVLLEMDRILRPNGYVIVR-ESSYFIDAVATIA 295 (332)
Q Consensus 253 f~h~~~~c~~~~iL~EmdRVLRPGG~lii~-d~~~~~~~i~~i~ 295 (332)
++. ..+..++.++...|+|+-.++.. ...+..+.+.++.
T Consensus 94 ---vk~-~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~ 133 (318)
T 3hwr_A 94 ---VKS-TDTQSAALAMKPALAKSALVLSLQNGVENADTLRSLL 133 (318)
T ss_dssp ---CCG-GGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHC
T ss_pred ---ccc-ccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHc
Confidence 332 25678999999999998766543 3334334555544
No 482
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=36.68 E-value=5.3 Score=34.69 Aligned_cols=20 Identities=30% Similarity=0.481 Sum_probs=16.3
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||+++++.+
T Consensus 106 ~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 106 AVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEEc
Confidence 35577899999999999754
No 483
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=36.15 E-value=5.3 Score=35.06 Aligned_cols=20 Identities=40% Similarity=0.614 Sum_probs=16.8
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||+++++.+
T Consensus 148 ~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 148 ALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp HHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEEe
Confidence 45578899999999999865
No 484
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=36.00 E-value=5.5 Score=34.10 Aligned_cols=19 Identities=26% Similarity=0.503 Sum_probs=16.0
Q ss_pred EEEEeeceecCCceEEecc
Q 020011 11 YLLEVHRILRPGGFWVLSG 29 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~ 29 (332)
+|-|+-|+|+|||+++++.
T Consensus 135 ~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 135 ALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCeEEEEEE
Confidence 3557889999999999975
No 485
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=35.95 E-value=5.3 Score=34.04 Aligned_cols=21 Identities=24% Similarity=0.520 Sum_probs=16.6
Q ss_pred EEEEeeceecCCceEEeccCC
Q 020011 11 YLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~pp 31 (332)
+|-++-|+|+|||+++++-+.
T Consensus 124 ~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 124 YFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp HHHHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCcEEEEEecC
Confidence 345678999999999997653
No 486
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=35.92 E-value=5.6 Score=35.97 Aligned_cols=18 Identities=22% Similarity=0.536 Sum_probs=15.5
Q ss_pred EEEEeeceecCCceEEec
Q 020011 11 YLLEVHRILRPGGFWVLS 28 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s 28 (332)
.|.|+.|+|+|||++++|
T Consensus 164 ~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 164 VVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp HHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHhccCCCEEEEE
Confidence 456788999999999986
No 487
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=35.86 E-value=4.9 Score=34.40 Aligned_cols=19 Identities=42% Similarity=0.770 Sum_probs=15.6
Q ss_pred EEEeeceecCCceEEeccC
Q 020011 12 LLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~p 30 (332)
|-|+-|+|+|||++|++-+
T Consensus 127 l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 127 FRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCcCcEEEEEeC
Confidence 4466799999999999765
No 488
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=35.80 E-value=51 Score=30.39 Aligned_cols=91 Identities=12% Similarity=0.070 Sum_probs=48.9
Q ss_pred CeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc--hhhHHHHHhcCcccc--cc-----cccccCC--C--CCCccce
Q 020011 183 RNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA--ANTLAVVYDRGLIGT--YH-----DWCEAFS--T--YPRTYDL 246 (332)
Q Consensus 183 r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~--~~~l~~a~eRGlig~--~~-----d~~e~~~--~--yp~sFDl 246 (332)
.+||=.|+ |.|.++..|++ .|..++.++.... .+..+.+.+-|.-.. ++ ++.+... + -.+.||+
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dv 248 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKL 248 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEE
T ss_pred cEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceE
Confidence 68998886 56677777765 3664443432211 123455555564211 11 1111111 1 1256888
Q ss_pred eEehhhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 247 LHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 247 Vh~s~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
|+-.- .-.... +..+.|||||.+++..
T Consensus 249 vid~~---------G~~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 249 ALNCV---------GGKSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp EEESS---------CHHHHH-HHHHTSCTTCEEEECC
T ss_pred EEECC---------CchhHH-HHHHHhccCCEEEEec
Confidence 76441 112333 7789999999998754
No 489
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=35.58 E-value=13 Score=32.84 Aligned_cols=21 Identities=33% Similarity=0.439 Sum_probs=17.2
Q ss_pred EEEeeceecCCceEEeccCCc
Q 020011 12 LLEVHRILRPGGFWVLSGPPV 32 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~s~ppv 32 (332)
|-++-|+|+|||+++++.|..
T Consensus 186 l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 186 LDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp HHHHHHHEEEEEEEEEEESSH
T ss_pred HHHHHHhCCCCCEEEEEeCCH
Confidence 445678999999999998854
No 490
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=35.57 E-value=5.7 Score=35.68 Aligned_cols=16 Identities=13% Similarity=0.067 Sum_probs=13.1
Q ss_pred EEEeeceecCCceEEe
Q 020011 12 LLEVHRILRPGGFWVL 27 (332)
Q Consensus 12 l~E~dRvLRpgGy~v~ 27 (332)
+-|+-|+|||||.|++
T Consensus 174 l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 174 ADIILSLLRKEFQYLV 189 (252)
T ss_dssp HHHHHHTEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEE
Confidence 4467899999999964
No 491
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=35.39 E-value=27 Score=32.38 Aligned_cols=89 Identities=11% Similarity=-0.025 Sum_probs=51.5
Q ss_pred CCCeEEEecC--cchHHHHHHhc-CCCeEEEEeecCc-hhhHHHHHhcCccccc--c--cccccC--CCCCCccceeEeh
Q 020011 181 KIRNVMDMNT--LYGGFAAAVID-DPLWVMNVVSSYA-ANTLAVVYDRGLIGTY--H--DWCEAF--STYPRTYDLLHLD 250 (332)
Q Consensus 181 ~~r~VLD~GC--G~Ggfaa~L~~-~~v~vmnv~p~d~-~~~l~~a~eRGlig~~--~--d~~e~~--~~yp~sFDlVh~s 250 (332)
...+||=.|+ |.|.+++.+++ .|.. |..++. ++.++.+.+-|....+ . ++.+.+ .+ .+.||+|+..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~---Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~-~~g~Dvvid~ 242 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAE---VYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAET-GQGVDIILDM 242 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH-SSCEEEEEES
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCE---EEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHh-CCCceEEEEC
Confidence 3578998853 45666666554 4663 444444 5667777766642111 1 111110 11 3568988765
Q ss_pred hhhccccccCCHHHHHHHHHhhhcCCcEEEEEc
Q 020011 251 GLFTAESHRCDMKFVLLEMDRILRPNGYVIVRE 283 (332)
Q Consensus 251 ~vf~h~~~~c~~~~iL~EmdRVLRPGG~lii~d 283 (332)
- . ...+.+.-+.|+|||.+++..
T Consensus 243 ~-----g-----~~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 243 I-----G-----AAYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp C-----C-----GGGHHHHHHTEEEEEEEEECC
T ss_pred C-----C-----HHHHHHHHHHhccCCEEEEEE
Confidence 2 1 125777889999999998754
No 492
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=35.07 E-value=9.1 Score=31.21 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=14.2
Q ss_pred eceecCCceEEeccCC
Q 020011 16 HRILRPGGFWVLSGPP 31 (332)
Q Consensus 16 dRvLRpgGy~v~s~pp 31 (332)
-|+|+|||+++++.+.
T Consensus 141 ~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 141 RQLLTNEAVIVCETDK 156 (187)
T ss_dssp TTCEEEEEEEEEEEET
T ss_pred hcccCCCCEEEEEeCC
Confidence 7899999999998775
No 493
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=34.90 E-value=34 Score=31.03 Aligned_cols=99 Identities=12% Similarity=0.094 Sum_probs=57.3
Q ss_pred CeEEEecCcc-h-HHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccccccccccCCCCCCccceeEehhhhcccccc
Q 020011 183 RNVMDMNTLY-G-GFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHR 259 (332)
Q Consensus 183 r~VLD~GCG~-G-gfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~~~~yp~sFDlVh~s~vf~h~~~~ 259 (332)
.+|-=+|+|. | .++..|++.|. +|...|. ++.++.+.+.|+... .+..+ .-. -|+|+.. +++.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~---~V~~~dr~~~~~~~~~~~g~~~~-~~~~~----~~~-aDvvi~~-----vp~~ 81 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG---GVTVYDIRIEAMTPLAEAGATLA-DSVAD----VAA-ADLIHIT-----VLDD 81 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT---CEEEECSSTTTSHHHHHTTCEEC-SSHHH----HTT-SSEEEEC-----CSSH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCHHHHHHHHHCCCEEc-CCHHH----HHh-CCEEEEE-----CCCh
Confidence 3677789886 3 46778888776 3344455 555555556664321 11101 113 6777655 4433
Q ss_pred CCHHHHHHHHHhhhcCCcEEEEEcCh--hHHHHHHHHH
Q 020011 260 CDMKFVLLEMDRILRPNGYVIVRESS--YFIDAVATIA 295 (332)
Q Consensus 260 c~~~~iL~EmdRVLRPGG~lii~d~~--~~~~~i~~i~ 295 (332)
..+..++.++...|+||-.++-.... ....++.+.+
T Consensus 82 ~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~ 119 (296)
T 3qha_A 82 AQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDL 119 (296)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHH
Confidence 34567888888899998887765543 3344454443
No 494
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=34.86 E-value=1.4e+02 Score=28.69 Aligned_cols=103 Identities=11% Similarity=0.034 Sum_probs=54.5
Q ss_pred eEEEecCcch--HHHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCcccc-------------cccccccCCCCC---Ccc
Q 020011 184 NVMDMNTLYG--GFAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGT-------------YHDWCEAFSTYP---RTY 244 (332)
Q Consensus 184 ~VLD~GCG~G--gfaa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~-------------~~d~~e~~~~yp---~sF 244 (332)
+|.=+|+|+= .+|+.|++.|. +|+.+|. ++.++.+.+.++.-. .... .....+. ...
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~---~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l-~~t~~~~~~~~~a 77 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGH---EVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRL-SGTTDFKKAVLDS 77 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC---EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCE-EEESCHHHHHHTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCce-EEeCCHHHHhccC
Confidence 3555788874 36677888876 4566666 666665554332100 0000 0000110 235
Q ss_pred ceeEehhhhccccccCC---------HHHHHHHHHhhhcC---CcEEEEE--cChhH-HHHHHHHH
Q 020011 245 DLLHLDGLFTAESHRCD---------MKFVLLEMDRILRP---NGYVIVR--ESSYF-IDAVATIA 295 (332)
Q Consensus 245 DlVh~s~vf~h~~~~c~---------~~~iL~EmdRVLRP---GG~lii~--d~~~~-~~~i~~i~ 295 (332)
|+|+.. ++.... +..++.++...|+| |-.++.. .++.. .+.+.+++
T Consensus 78 Dvviia-----Vptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l 138 (436)
T 1mv8_A 78 DVSFIC-----VGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLI 138 (436)
T ss_dssp SEEEEC-----CCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHH
T ss_pred CEEEEE-----cCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHH
Confidence 666554 222222 67899999999999 6555542 23344 45555554
No 495
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=34.83 E-value=6 Score=35.60 Aligned_cols=21 Identities=33% Similarity=0.449 Sum_probs=16.9
Q ss_pred EEEEeeceecCCceEEeccCC
Q 020011 11 YLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~pp 31 (332)
+|-|+-|+|||||++|++-+-
T Consensus 172 ~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 172 LYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp HHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHcCCCcEEEEEeec
Confidence 345678999999999998654
No 496
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=34.65 E-value=6 Score=34.25 Aligned_cols=18 Identities=39% Similarity=0.647 Sum_probs=15.2
Q ss_pred EEEEeeceecCCceEEec
Q 020011 11 YLLEVHRILRPGGFWVLS 28 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s 28 (332)
+|-|+-|+|+|||+++++
T Consensus 123 ~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 123 VLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp HHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHCCCCcEEEEE
Confidence 455778999999999987
No 497
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=34.31 E-value=5.4 Score=35.15 Aligned_cols=20 Identities=25% Similarity=0.488 Sum_probs=15.6
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-++-|+|+|||++++.-+
T Consensus 124 ~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 124 ALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEEc
Confidence 34567889999999998654
No 498
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=34.14 E-value=6.1 Score=33.05 Aligned_cols=20 Identities=20% Similarity=0.363 Sum_probs=16.1
Q ss_pred EEEEeeceecCCceEEeccC
Q 020011 11 YLLEVHRILRPGGFWVLSGP 30 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~p 30 (332)
+|-|+-|+|+|||+++++.+
T Consensus 128 ~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 128 FWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEeC
Confidence 45567799999999999743
No 499
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=33.86 E-value=5.7 Score=33.93 Aligned_cols=21 Identities=33% Similarity=0.507 Sum_probs=16.7
Q ss_pred EEEEeeceecCCceEEeccCC
Q 020011 11 YLLEVHRILRPGGFWVLSGPP 31 (332)
Q Consensus 11 ~l~E~dRvLRpgGy~v~s~pp 31 (332)
+|-++-|+|+|||+++++.+.
T Consensus 121 ~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 121 ALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHcCCCcEEEEEEeC
Confidence 344667999999999998664
No 500
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=33.73 E-value=1.1e+02 Score=29.59 Aligned_cols=93 Identities=14% Similarity=0.080 Sum_probs=57.8
Q ss_pred eEEEecCcchH--HHHHHhcCCCeEEEEeecCc-hhhHHHHHhcCccccccccccc--CCCCC-CccceeEehhhhcccc
Q 020011 184 NVMDMNTLYGG--FAAAVIDDPLWVMNVVSSYA-ANTLAVVYDRGLIGTYHDWCEA--FSTYP-RTYDLLHLDGLFTAES 257 (332)
Q Consensus 184 ~VLD~GCG~Gg--faa~L~~~~v~vmnv~p~d~-~~~l~~a~eRGlig~~~d~~e~--~~~yp-~sFDlVh~s~vf~h~~ 257 (332)
+|+=+|+|.=| ++..|.+.+. .|+-+|. ++.++.+.+.|....+.|-... +..-. ...|+|.+. .+
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~---~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~-----~~ 77 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGV---KMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA-----ID 77 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC---CEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEEC-----CS
T ss_pred eEEEECCCHHHHHHHHHHHHCCC---CEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEEC-----CC
Confidence 46667765432 3344555665 4455666 7788888888876666553332 11133 678877765 12
Q ss_pred ccCCHHHHHHHHHhhhcCCcEEEEEcCh
Q 020011 258 HRCDMKFVLLEMDRILRPNGYVIVRESS 285 (332)
Q Consensus 258 ~~c~~~~iL~EmdRVLRPGG~lii~d~~ 285 (332)
+ ....-.+.++.|-+.|...+|.+...
T Consensus 78 ~-~~~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 78 D-PQTNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp S-HHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred C-hHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 1 12334777888889999999887754
Done!