Citrus Sinensis ID: 020011

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330--
MMNIFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSVLESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQKKLWYSSNQTSS
cccccccccEEEEEEEcECccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHcEEEEEEEccEEEEEEccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccEEEEEcccccEEEEEEEcccccccccEEcccccccccccccccccccccccEEEcccccccccccccHHHHHHHHccccccccEEEEEccHHHHHHHHHHHHcccCEEEEEEccccccccEEEEEEEccccccccccc
MMNIFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNL**SVL*****W***LHV*******I**GSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQKKLWY*******
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MMNIFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSVLESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAESHRCDMKFVLLEMDRILRPNGYVIVRESSYFIDAVATIAKGMKWSCHKEDTEYGVEKEKLLLCQKKLWYSSNQTSS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable methyltransferase PMT20 probableQ9C6S7

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1TW3, chain A
Confidence level:confident
Coverage over the Query: 180-285
View the alignment between query and template
View the model in PyMOL
Template: 3G89, chain A
Confidence level:confident
Coverage over the Query: 158-326
View the alignment between query and template
View the model in PyMOL
Template: 2LD4, chain A
Confidence level:probable
Coverage over the Query: 10-30
View the alignment between query and template
View the model in PyMOL