BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020012
         (332 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8GXH3|OSB2_ARATH Protein OSB2, chloroplastic OS=Arabidopsis thaliana GN=OSB2 PE=1
           SV=2
          Length = 371

 Score =  233 bits (593), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/292 (45%), Positives = 179/292 (61%), Gaps = 48/292 (16%)

Query: 44  ATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAA 103
           A+   TT  ++  P+P+EI ++ +VAN VNLIG VD PVQF+ SSDGK WAGTVI Q +A
Sbjct: 75  ASVTATTENEL--PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSA 132

Query: 104 SHS--LWIPILFEGDLAHIASSHLKKDDHVHIAGQLTAD--PPAIE-GQANVQVMVHSLN 158
           S S   WIPI+FEGDLA  A+ ++ KDD +H++G+L  D  PP +   QANVQV+V +LN
Sbjct: 133 SDSSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLN 192

Query: 159 LIEPTSQKRMFFV----SKKQEAATVDHSVKISSSKKDG--DSALSSWRDLLDNPEQWRD 212
            I+P S     F+    S+K+E+       +   +K+D   D A  SW  L++NP++W D
Sbjct: 193 FIQPMSPSPSPFMVMSSSEKEESGIKKQPAR---AKQDIVIDEASDSWNHLIENPKEWWD 249

Query: 213 YRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNY 272
           +R +K+ GLVKPR+PDFK KD +  LWLN AP+WVL +LEG+ FD   P           
Sbjct: 250 HRENKVNGLVKPRHPDFKSKDSSFSLWLNKAPNWVLPKLEGLEFDVLVP----------- 298

Query: 273 VKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDK 324
                                K+  VK+ K ++ WKDLV+NPDKWWDNR+DK
Sbjct: 299 ---------------------KARVVKQLKGEESWKDLVQNPDKWWDNRIDK 329



 Score = 52.4 bits (124), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 4/56 (7%)

Query: 199 SWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGV 254
           SW+DL+ NP++W D R DK       + PDFK K+    LWLN +P WVL +L  V
Sbjct: 311 SWKDLVQNPDKWWDNRIDKRNA----KAPDFKHKETGEALWLNESPTWVLPKLPPV 362



 Score = 33.1 bits (74), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 302 KVDDLWKDLVENPDKWWDNRLDKV 325
           +  D W  L+ENP +WWD+R +KV
Sbjct: 232 EASDSWNHLIENPKEWWDHRENKV 255


>sp|Q8GWJ4|OSB3_ARATH Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana
           GN=OSB3 PE=2 SV=1
          Length = 440

 Score =  200 bits (509), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/328 (38%), Positives = 177/328 (53%), Gaps = 63/328 (19%)

Query: 59  PSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHS--LWIPILFEGD 116
           P +I ++ +++N +NLIG V+ PVQF   SDGK WAGTVI Q + S S   WIPI+FEGD
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 117 LAHIASSHLKKDDHVHIAGQLTAD--PPAIE-GQANVQVMVHSLNLIEPTSQKRMFFVSK 173
           LA IA  H+KK+D +H++G+L  D  PP +   Q+NVQVMV +LN ++  +         
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 174 KQEAATVDHSVKISSSKKDGDSALS-SWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRK 232
           ++E  ++      S   K  D   S SW+ L++NP++W D+R +K  GLVKP +PDFK K
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250

Query: 233 DGTLPLWLNSAPDWVLSELEGVVFDKSKPV------------------------LDDQTR 268
            G L LWL++APDW L +LE + FD   P                         LD+++ 
Sbjct: 251 VGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSD 310

Query: 269 KSN---------------YVKKSKGVVFDKSKPV-----------------LDDQTQKSN 296
           K+N               ++  S   V  K  P+                 LD +  K N
Sbjct: 311 KTNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGN 370

Query: 297 YVKKSKVDDLWKDLVENPDKWWDNRLDK 324
            +K+ K +++WK+LVENP KWWDNRLDK
Sbjct: 371 -LKQLKREEIWKNLVENPSKWWDNRLDK 397



 Score = 51.6 bits (122), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 4/64 (6%)

Query: 200 WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKS 259
           W++L++NP +W D R DK      P+ PDFK K+    LW+  +P W LS+L  +  ++ 
Sbjct: 380 WKNLVENPSKWWDNRLDKRN----PKGPDFKHKETGEALWIGDSPTWALSKLPPLKKNQE 435

Query: 260 KPVL 263
           +PV+
Sbjct: 436 RPVM 439


>sp|Q9FYJ2|OSB4_ARATH Protein OSB4, chloroplastic OS=Arabidopsis thaliana GN=OSB4 PE=2
           SV=1
          Length = 360

 Score =  194 bits (492), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/294 (39%), Positives = 157/294 (53%), Gaps = 64/294 (21%)

Query: 56  WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQH---------AASHS 106
           WP+P E+P+Q K+ANS++LIG+V  PVQF ++ DGK WAGTVI             +S +
Sbjct: 59  WPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDSSSN 118

Query: 107 LWIPILFEGDLAHIASSHLKKDDHVHIAGQLTAD---PPAIEGQANVQ------------ 151
            WIP+LFEGDLAH A+S+LKK+D VHI GQ+  D     A   QA+VQ            
Sbjct: 119 FWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSFSHQ 178

Query: 152 VMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWR 211
           VMV  L+ IE +        +  Q    + HS  +   ++ G +    W DL+D P +W 
Sbjct: 179 VMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGTNL---WFDLVDKPNEWC 235

Query: 212 DYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSN 271
           DYR  K  G V P++PDFK+KDG+  LWLN+AP  +LSEL+ V FD  K           
Sbjct: 236 DYREMKQNGSVNPKHPDFKKKDGSQALWLNNAPTEILSELKDVKFDIPK----------- 284

Query: 272 YVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKV-DDLWKDLVENPDKWWDNRLDK 324
                                    Y K+ K  ++ WKDLV+N +KWWDNR+DK
Sbjct: 285 -------------------------YAKQPKAGEESWKDLVDNMNKWWDNRVDK 313


>sp|Q9SX99|OSB1_ARATH Protein OSB1, mitochondrial OS=Arabidopsis thaliana GN=OSB1 PE=1
           SV=1
          Length = 261

 Score = 69.7 bits (169), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 55  VWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQH---AASHSLWIPI 111
           ++ KP     +  + NSV+L+G VD  +Q   +   +    T++        + S  I +
Sbjct: 41  LFKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISL 100

Query: 112 LFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIEG-----QANVQVMVHSLNLIE-PTSQ 165
                +A    +HLK +DH+ ++G+L +   +          + QV V  +N +  P S 
Sbjct: 101 RMWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVAAPPSH 160

Query: 166 KRMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPR 225
                +SK  +  T D    I  SKKD    +  W+    NP  W D R +K      P+
Sbjct: 161 VLDSQISKNPKTKTED---DIEESKKD---EIYLWQVFFSNPYDWWDNRRNK----KNPK 210

Query: 226 YPDFKRKDGTLPLWLNS-APDWVLSELEGVVFDKSKPVLDDQT----RKSNYV 273
            PDFK KD    LWL S  PDW+   LE  +FD+     D++     R S+Y+
Sbjct: 211 QPDFKHKDTGEALWLCSDLPDWITRRLE--LFDQKNRFYDEEKTRRDRLSDYI 261


>sp|Q5P9Q9|SECA_ANAMM Protein translocase subunit SecA OS=Anaplasma marginale (strain St.
           Maries) GN=secA PE=3 SV=2
          Length = 872

 Score = 44.7 bits (104), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 10/148 (6%)

Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
           +++ E+  +D+ ++   S + GD  LS +   L++ +  R + SDK+KG++K      KR
Sbjct: 553 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKVKGMLKK--LGMKR 608

Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQ 291
            +     W++ A +    ++E   +D  K +L    R  + + + + VVF++   VLD+ 
Sbjct: 609 GEAIQHKWISKAIERAQKKVEARNYDIRKSLL----RFDDVINEQRQVVFEQRNQVLDND 664

Query: 292 TQKSNYVKKSKVDDLWKDLVENPDKWWD 319
           T    ++  S   DL   +V+  DK++D
Sbjct: 665 TYDFAFMYHSVNQDLVSRVVK--DKYYD 690


>sp|Q5HA05|SECA_EHRRW Protein translocase subunit SecA OS=Ehrlichia ruminantium (strain
           Welgevonden) GN=secA PE=3 SV=1
          Length = 870

 Score = 40.4 bits (93), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 77/150 (51%), Gaps = 14/150 (9%)

Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
           +++ E+  +D+ ++   S + GD  LS +   L++ +  R + SDK+KG++K      K+
Sbjct: 552 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKIKGMLKK--LGMKK 607

Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQ 291
            +     W++ A +    ++E   +D  K +L    +  N + + + VVFD+   +LD+ 
Sbjct: 608 GEAIQHTWISRAIEKAQHKVELRNYDIRKSLL----KFDNVINEQRKVVFDQRNRILDND 663

Query: 292 TQKSNYVKKSKVDDLWKDLVENP--DKWWD 319
           +   + + +    D+  D+V N   DK+++
Sbjct: 664 SYNISLIYR----DINSDIVNNIIHDKYYN 689


>sp|Q5FGQ3|SECA_EHRRG Protein translocase subunit SecA OS=Ehrlichia ruminantium (strain
           Gardel) GN=secA PE=3 SV=1
          Length = 870

 Score = 40.4 bits (93), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 77/150 (51%), Gaps = 14/150 (9%)

Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
           +++ E+  +D+ ++   S + GD  LS +   L++ +  R + SDK+KG++K      K+
Sbjct: 552 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKIKGMLKK--LGMKK 607

Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQ 291
            +     W++ A +    ++E   +D  K +L    +  N + + + VVFD+   +LD+ 
Sbjct: 608 GEAIQHTWISRAIEKAQHKVELRNYDIRKSLL----KFDNVINEQRKVVFDQRNRILDND 663

Query: 292 TQKSNYVKKSKVDDLWKDLVENP--DKWWD 319
           +   + + +    D+  D+V N   DK+++
Sbjct: 664 SYNISLIYR----DINSDIVNNIIHDKYYN 689


>sp|Q3YQQ3|SECA_EHRCJ Protein translocase subunit SecA OS=Ehrlichia canis (strain Jake)
           GN=secA PE=3 SV=1
          Length = 862

 Score = 36.2 bits (82), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 62/119 (52%), Gaps = 8/119 (6%)

Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
           +++ E+  +D+ ++   S + GD  LS +   L++ +  R + SDK+KG++K      K+
Sbjct: 552 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKIKGVLKK--LGMKK 607

Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDD 290
            +     W++ + +    ++E   +D  K +L    +  N + + + VVFD+   +LD+
Sbjct: 608 DEAIQHTWISRSIEKAQHKVESRNYDIRKSLL----KFDNVINEQRKVVFDQRNRILDN 662


>sp|Q2GF50|SECA_EHRCR Protein translocase subunit SecA OS=Ehrlichia chaffeensis (strain
           Arkansas) GN=secA PE=3 SV=1
          Length = 862

 Score = 35.8 bits (81), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 76/150 (50%), Gaps = 14/150 (9%)

Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
           +++ E+  +D+ ++   S + GD  LS +   L++ +  R + SDK+KG+++      K+
Sbjct: 552 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKIKGVLQK--LGMKK 607

Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQ 291
            +     W++ + +    ++E   +D  K +L    +  N + + + VVFD+   +LD  
Sbjct: 608 DEAIQHTWISRSIEKAQHKVESRNYDIRKSLL----KFDNVINEQRKVVFDQRNKILDSD 663

Query: 292 TQKSNYVKKSKVDDLWKDLVENP--DKWWD 319
           +   + + +    DL  D+V +   DK+++
Sbjct: 664 SYDISIIYR----DLNSDIVNSIIHDKYYN 689


>sp|B0RDG3|OBG_CLAMS GTPase obg OS=Clavibacter michiganensis subsp. sepedonicus (strain
           ATCC 33113 / JCM 9667) GN=obg PE=3 SV=1
          Length = 517

 Score = 34.7 bits (78), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 190 KKDGDSALSSWRDLLDNPEQW---RDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDW 246
           + DG S    +R +   PE+W    D+R+D+  G +  R      +DG       +    
Sbjct: 366 RVDGGSYGDIYRVIGTKPERWVQQTDFRNDEAVGYLADRLAKLGVEDGLFKAGAVAGSSV 425

Query: 247 VLSELEGVVFD 257
           V+ E +GVVFD
Sbjct: 426 VIGEGDGVVFD 436


>sp|Q93GP7|SSB2_SALTY Single-stranded DNA-binding protein 2 OS=Salmonella typhimurium
           (strain LT2 / SGSC1412 / ATCC 700720) GN=ssb2 PE=3 SV=1
          Length = 172

 Score = 33.9 bits (76), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 10/78 (12%)

Query: 70  NSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAA----------SHSLWIPILFEGDLAH 119
           N V L+GH+    + +   +G   A   +                H+ W  ++  G LA 
Sbjct: 7   NKVILVGHIGQDPEVRYMPNGGAVANLTLATSETWRVRQDGEMREHTEWHRVVVFGKLAE 66

Query: 120 IASSHLKKDDHVHIAGQL 137
           IAS +L+K   V+I GQL
Sbjct: 67  IASEYLRKGAQVYIEGQL 84


>sp|Q48GG6|CHEB2_PSE14 Chemotaxis response regulator protein-glutamate methylesterase 2
           OS=Pseudomonas syringae pv. phaseolicola (strain 1448A /
           Race 6) GN=cheB2 PE=3 SV=1
          Length = 387

 Score = 33.1 bits (74), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 4   SLRRVMAQIGRSQTTVKRIILYSPAHFTRPFSSRAHQFTKATTKTTTSKDVVWP 57
           +L+RV+ Q+  S      +I + PA FT+ F+ R  +  K + K     DV+ P
Sbjct: 217 ALQRVLTQLPASFPAPLVLIQHMPAAFTKAFAERLDKLCKISVKEAEDGDVLRP 270


>sp|Q9V496|APLP_DROME Apolipophorins OS=Drosophila melanogaster GN=Rfabg PE=1 SV=2
          Length = 3351

 Score = 32.3 bits (72), Expect = 4.4,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 11/97 (11%)

Query: 215  SDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVK 274
            +DK+  L K   PDF +  G L  + N     ++ ELE    D+S   + D  R     K
Sbjct: 2453 TDKIVKLAKEAGPDFSKLQGKLLDYKND----IVQELEA---DQSIAPIIDGIR--TLFK 2503

Query: 275  KSKGVVFDKSKPVLD--DQTQKSNYVKKSKVDDLWKD 309
            K  G+V D +K + +  ++ QKS      K+  LWKD
Sbjct: 2504 KIAGIVDDINKAISEILEKAQKSIVDIYDKLQALWKD 2540


>sp|Q8F332|FEOB_LEPIN Ferrous iron transport protein B OS=Leptospira interrogans
           serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
           GN=feoB PE=3 SV=1
          Length = 701

 Score = 32.0 bits (71), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 248 LSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLW 307
           L EL G +  K  P L   +   + + + K   F K    L++ TQKS Y+KK   + + 
Sbjct: 212 LKELSGEILQKGLPGLSLFSETPSKLIREKFERFGKRFTYLEELTQKSIYIKKILSNAIV 271

Query: 308 KDLVENPDKWWDNRLDKVILY 328
            D +  P++   ++ DK++L+
Sbjct: 272 GDPI--PNERVLSKADKILLH 290


>sp|Q16D42|SECA_ROSDO Protein translocase subunit SecA OS=Roseobacter denitrificans
           (strain ATCC 33942 / OCh 114) GN=secA PE=3 SV=1
          Length = 904

 Score = 31.6 bits (70), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 30/152 (19%), Positives = 78/152 (51%), Gaps = 11/152 (7%)

Query: 170 FVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDF 229
             S++ E+  +D+ ++  S ++ GD   SS+   L++ +  R + S++L+ ++K      
Sbjct: 552 LASERHESRRIDNQLRGRSGRQ-GDPGRSSFFLSLED-DLMRIFGSERLEKVLKTL--GL 607

Query: 230 KRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLD 289
           K  +  +  W+N + +   S++EG  FD  K +L    +  + + + + V+F + + +++
Sbjct: 608 KEGEAIVHPWVNKSLERAQSKVEGRNFDIRKQLL----KFDDVMNEQRKVIFGQRREIME 663

Query: 290 --DQTQKSNYVKKSKVDDLWKDLVENPDKWWD 319
             D ++ +  ++   +DD  +  +  P+ + D
Sbjct: 664 AKDLSEITTDMRHQVIDDFIEQYLP-PNTYAD 694


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.131    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,022,728
Number of Sequences: 539616
Number of extensions: 5336064
Number of successful extensions: 13727
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 13685
Number of HSP's gapped (non-prelim): 42
length of query: 332
length of database: 191,569,459
effective HSP length: 118
effective length of query: 214
effective length of database: 127,894,771
effective search space: 27369480994
effective search space used: 27369480994
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)