Query 020013
Match_columns 332
No_of_seqs 301 out of 2312
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 10:28:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020013.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020013hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bo9_A Putative nitroalkan dio 100.0 5.8E-52 2E-56 388.7 30.7 300 3-327 19-319 (326)
2 2gjl_A Hypothetical protein PA 100.0 5.1E-51 1.8E-55 383.1 30.6 304 3-326 8-318 (328)
3 2z6i_A Trans-2-enoyl-ACP reduc 100.0 1.5E-50 5E-55 380.4 28.6 305 2-329 4-314 (332)
4 3bw2_A 2-nitropropane dioxygen 100.0 7.2E-49 2.5E-53 374.0 34.7 301 3-328 5-351 (369)
5 2uva_G Fatty acid synthase bet 100.0 1.3E-41 4.3E-46 375.0 23.5 303 2-321 575-924 (2060)
6 2uv8_G Fatty acid synthase sub 100.0 7.5E-40 2.6E-44 358.8 19.9 245 2-252 582-870 (2051)
7 3zen_D Fatty acid synthase; tr 100.0 1.1E-35 3.8E-40 335.7 17.8 239 2-245 420-704 (3089)
8 3ffs_A Inosine-5-monophosphate 100.0 3.7E-31 1.3E-35 251.7 21.6 202 3-209 35-289 (400)
9 4fo4_A Inosine 5'-monophosphat 100.0 8.3E-29 2.8E-33 233.6 22.6 203 3-210 39-255 (366)
10 3khj_A Inosine-5-monophosphate 100.0 1.7E-27 5.7E-32 224.9 20.7 198 3-207 38-248 (361)
11 1eep_A Inosine 5'-monophosphat 99.9 4.9E-26 1.7E-30 218.9 21.8 269 5-326 37-368 (404)
12 2c6q_A GMP reductase 2; TIM ba 99.9 5.2E-24 1.8E-28 200.5 19.7 199 5-209 52-266 (351)
13 3r2g_A Inosine 5'-monophosphat 99.9 5.5E-24 1.9E-28 199.6 18.3 188 8-207 40-240 (361)
14 1ypf_A GMP reductase; GUAC, pu 99.9 5E-23 1.7E-27 193.2 18.1 194 8-211 44-255 (336)
15 4fxs_A Inosine-5'-monophosphat 99.8 2.1E-19 7.1E-24 176.6 21.9 202 3-208 36-376 (496)
16 3usb_A Inosine-5'-monophosphat 99.8 1.9E-19 6.5E-24 177.4 21.6 129 78-207 259-400 (511)
17 4avf_A Inosine-5'-monophosphat 99.8 1.8E-19 6E-24 176.9 21.1 131 77-208 231-374 (490)
18 2qr6_A IMP dehydrogenase/GMP r 99.8 5.1E-19 1.7E-23 169.4 22.5 195 8-208 65-319 (393)
19 1jcn_A Inosine monophosphate d 99.8 5E-18 1.7E-22 167.9 22.6 131 78-212 258-404 (514)
20 1vrd_A Inosine-5'-monophosphat 99.8 1.7E-18 5.9E-23 170.5 16.5 137 78-215 240-389 (494)
21 4af0_A Inosine-5'-monophosphat 99.8 6.5E-17 2.2E-21 156.3 22.6 128 78-207 284-425 (556)
22 3q58_A N-acetylmannosamine-6-p 99.7 5.1E-17 1.7E-21 144.0 18.0 163 25-201 39-216 (229)
23 3igs_A N-acetylmannosamine-6-p 99.7 4.3E-17 1.5E-21 144.8 17.2 162 25-200 39-215 (232)
24 2cu0_A Inosine-5'-monophosphat 99.7 1.9E-17 6.6E-22 162.6 14.7 197 3-208 40-370 (486)
25 1zfj_A Inosine monophosphate d 99.7 1.9E-16 6.6E-21 155.7 21.2 199 3-207 37-377 (491)
26 3b0p_A TRNA-dihydrouridine syn 99.7 1.4E-16 4.7E-21 150.1 17.1 191 9-204 2-234 (350)
27 1ofd_A Ferredoxin-dependent gl 99.7 2.9E-18 9.9E-23 182.4 3.7 198 6-205 863-1138(1520)
28 1ep3_A Dihydroorotate dehydrog 99.7 5.8E-17 2E-21 150.1 10.0 154 46-203 79-278 (311)
29 1me8_A Inosine-5'-monophosphat 99.7 1.1E-15 3.8E-20 150.5 19.1 129 79-209 246-395 (503)
30 2nli_A Lactate oxidase; flavoe 99.7 1.3E-15 4.5E-20 144.1 18.3 189 5-202 73-320 (368)
31 1p0k_A Isopentenyl-diphosphate 99.7 1.5E-15 5.1E-20 143.1 18.0 193 5-204 48-289 (349)
32 1ea0_A Glutamate synthase [NAD 99.7 2E-17 6.9E-22 175.7 5.6 198 7-205 847-1103(1479)
33 3sr7_A Isopentenyl-diphosphate 99.7 5.1E-16 1.8E-20 146.1 13.2 192 9-206 85-318 (365)
34 1y0e_A Putative N-acetylmannos 99.7 2.3E-15 7.7E-20 132.8 16.0 173 15-200 16-209 (223)
35 2yw3_A 4-hydroxy-2-oxoglutarat 99.6 7.8E-15 2.7E-19 128.1 16.0 178 1-200 4-184 (207)
36 1yxy_A Putative N-acetylmannos 99.6 1.6E-14 5.6E-19 128.3 16.5 163 24-200 38-220 (234)
37 1vhn_A Putative flavin oxidore 99.6 1.2E-14 4E-19 135.2 16.1 185 8-203 2-221 (318)
38 3sgz_A Hydroxyacid oxidase 2; 99.6 3.3E-14 1.1E-18 132.7 18.8 188 5-201 62-307 (352)
39 2nzl_A Hydroxyacid oxidase 1; 99.6 1.6E-14 5.4E-19 137.7 16.0 188 5-203 87-344 (392)
40 3vkj_A Isopentenyl-diphosphate 99.6 2.1E-14 7.3E-19 135.5 15.9 188 9-202 58-303 (368)
41 1kbi_A Cytochrome B2, L-LCR; f 99.6 4.9E-14 1.7E-18 138.5 18.8 194 5-204 182-441 (511)
42 1xi3_A Thiamine phosphate pyro 99.6 3E-14 1E-18 124.6 14.3 168 25-203 29-198 (215)
43 1vcf_A Isopentenyl-diphosphate 99.6 4E-14 1.4E-18 132.4 14.7 192 5-202 51-292 (332)
44 1gox_A (S)-2-hydroxy-acid oxid 99.6 2.7E-13 9.2E-18 128.5 20.4 185 5-201 64-315 (370)
45 1yad_A Regulatory protein TENI 99.6 6.4E-14 2.2E-18 123.5 14.8 171 34-215 40-213 (221)
46 1nsj_A PRAI, phosphoribosyl an 99.5 3.3E-13 1.1E-17 117.3 16.7 169 21-201 8-186 (205)
47 4e38_A Keto-hydroxyglutarate-a 99.5 1.4E-13 4.8E-18 121.4 13.6 171 11-201 34-208 (232)
48 1jub_A Dihydroorotate dehydrog 99.5 3.5E-13 1.2E-17 124.8 16.9 188 9-200 11-276 (311)
49 1wa3_A 2-keto-3-deoxy-6-phosph 99.5 4.8E-14 1.6E-18 122.7 10.3 178 1-200 1-183 (205)
50 3o63_A Probable thiamine-phosp 99.5 2.4E-13 8.2E-18 121.3 14.2 171 25-203 46-227 (243)
51 1v5x_A PRA isomerase, phosphor 99.5 3.1E-13 1.1E-17 117.2 14.5 167 21-201 7-180 (203)
52 1f76_A Dihydroorotate dehydrog 99.5 1.2E-13 4.3E-18 129.2 12.9 187 9-200 54-323 (336)
53 3lab_A Putative KDPG (2-keto-3 99.5 5E-13 1.7E-17 116.2 14.6 179 1-199 2-191 (217)
54 1p4c_A L(+)-mandelate dehydrog 99.5 2.6E-12 8.8E-17 122.1 20.5 96 101-201 215-313 (380)
55 2e6f_A Dihydroorotate dehydrog 99.5 2.7E-13 9.4E-18 125.7 13.3 187 9-200 13-278 (314)
56 4adt_A Pyridoxine biosynthetic 99.5 2.5E-13 8.4E-18 124.2 11.9 189 22-219 28-263 (297)
57 3qja_A IGPS, indole-3-glycerol 99.5 3.8E-12 1.3E-16 115.4 19.5 144 53-203 103-250 (272)
58 1vhc_A Putative KHG/KDPG aldol 99.4 1.7E-12 5.8E-17 114.5 13.5 157 27-202 34-192 (224)
59 1h1y_A D-ribulose-5-phosphate 99.4 2E-12 6.8E-17 114.5 14.0 145 53-202 54-208 (228)
60 1wbh_A KHG/KDPG aldolase; lyas 99.4 2.7E-12 9.4E-17 112.4 14.6 157 27-202 33-191 (214)
61 1tqj_A Ribulose-phosphate 3-ep 99.4 1E-12 3.5E-17 116.5 11.9 147 53-202 52-208 (230)
62 2nv1_A Pyridoxal biosynthesis 99.4 1.8E-13 6.1E-18 126.5 7.2 210 21-242 27-284 (305)
63 1gte_A Dihydropyrimidine dehyd 99.4 3.8E-12 1.3E-16 135.3 18.4 191 5-200 536-821 (1025)
64 3tsm_A IGPS, indole-3-glycerol 99.4 1.7E-11 5.8E-16 110.7 19.7 168 25-203 82-257 (272)
65 2zbt_A Pyridoxal biosynthesis 99.4 6.8E-13 2.3E-17 122.1 10.5 176 21-202 27-245 (297)
66 3f4w_A Putative hexulose 6 pho 99.4 4.2E-12 1.4E-16 110.8 14.1 145 53-202 42-194 (211)
67 2v82_A 2-dehydro-3-deoxy-6-pho 99.4 8.8E-12 3E-16 108.9 15.8 154 34-202 30-183 (212)
68 1mxs_A KDPG aldolase; 2-keto-3 99.4 2E-12 7E-17 114.0 10.6 158 26-202 42-201 (225)
69 3ceu_A Thiamine phosphate pyro 99.4 3.3E-12 1.1E-16 111.6 10.7 174 25-215 16-192 (210)
70 1rpx_A Protein (ribulose-phosp 99.3 5.3E-12 1.8E-16 111.8 11.3 149 53-203 58-215 (230)
71 2tps_A Protein (thiamin phosph 99.3 5.9E-12 2E-16 111.0 11.5 165 26-202 35-207 (227)
72 1wv2_A Thiazole moeity, thiazo 99.3 6.9E-12 2.4E-16 110.8 10.9 124 87-216 102-238 (265)
73 1vzw_A Phosphoribosyl isomeras 99.3 9E-12 3.1E-16 111.2 11.4 144 53-203 65-230 (244)
74 4aaj_A N-(5'-phosphoribosyl)an 99.3 6.1E-11 2.1E-15 104.5 16.3 161 21-198 27-205 (228)
75 2fli_A Ribulose-phosphate 3-ep 99.3 2.2E-11 7.4E-16 106.9 11.2 147 53-201 51-204 (220)
76 3o07_A Pyridoxine biosynthesis 99.3 6.2E-11 2.1E-15 105.5 13.9 190 21-219 17-254 (291)
77 2y88_A Phosphoribosyl isomeras 99.3 3.2E-11 1.1E-15 107.4 12.2 144 53-203 64-233 (244)
78 1rd5_A Tryptophan synthase alp 99.3 5.4E-11 1.8E-15 107.4 13.7 152 47-203 78-238 (262)
79 1tv5_A Dhodehase, dihydroorota 99.3 8.4E-11 2.9E-15 113.2 15.2 89 110-200 296-407 (443)
80 3vnd_A TSA, tryptophan synthas 99.2 1.2E-10 4.2E-15 105.0 14.8 152 48-203 79-243 (267)
81 3nav_A Tryptophan synthase alp 99.2 9.2E-11 3.1E-15 106.0 14.0 151 49-203 82-245 (271)
82 3ctl_A D-allulose-6-phosphate 99.2 6.5E-11 2.2E-15 104.7 12.5 146 53-201 47-202 (231)
83 3i65_A Dihydroorotate dehydrog 99.2 9.8E-11 3.3E-15 111.4 14.1 137 63-201 181-380 (415)
84 1xm3_A Thiazole biosynthesis p 99.2 6.4E-11 2.2E-15 107.0 12.0 198 9-215 11-228 (264)
85 1thf_D HISF protein; thermophI 99.2 4.7E-10 1.6E-14 100.4 17.6 172 24-202 32-231 (253)
86 4ef8_A Dihydroorotate dehydrog 99.2 8.3E-11 2.8E-15 110.3 12.9 191 5-201 40-312 (354)
87 3zwt_A Dihydroorotate dehydrog 99.2 1.6E-10 5.6E-15 108.9 15.1 136 63-200 146-332 (367)
88 3ovp_A Ribulose-phosphate 3-ep 99.2 1E-10 3.4E-15 103.4 12.6 143 54-202 53-204 (228)
89 1h5y_A HISF; histidine biosynt 99.2 8.5E-10 2.9E-14 98.2 18.3 183 24-215 35-245 (253)
90 1ka9_F Imidazole glycerol phos 99.2 8.9E-10 3E-14 98.5 17.7 172 24-202 33-232 (252)
91 1pii_A N-(5'phosphoribosyl)ant 99.2 7.1E-11 2.4E-15 113.7 10.9 162 21-199 261-431 (452)
92 3oix_A Putative dihydroorotate 99.2 3.2E-10 1.1E-14 106.0 15.1 191 5-200 41-309 (345)
93 3inp_A D-ribulose-phosphate 3- 99.2 1.6E-10 5.5E-15 102.9 12.0 145 54-202 76-230 (246)
94 1i4n_A Indole-3-glycerol phosp 99.2 4.7E-10 1.6E-14 100.1 14.7 167 25-203 64-238 (251)
95 1vc4_A Indole-3-glycerol phosp 99.2 7.2E-10 2.5E-14 99.5 16.1 168 25-203 68-244 (254)
96 1geq_A Tryptophan synthase alp 99.2 3.7E-10 1.3E-14 100.9 13.6 152 49-203 66-228 (248)
97 1tqx_A D-ribulose-5-phosphate 99.1 3.9E-10 1.3E-14 99.4 12.8 143 53-202 53-208 (227)
98 2w6r_A Imidazole glycerol phos 99.1 9.8E-10 3.4E-14 99.1 15.0 171 24-203 32-237 (266)
99 3nl6_A Thiamine biosynthetic b 99.1 9.3E-10 3.2E-14 108.7 15.7 185 25-216 28-231 (540)
100 2htm_A Thiazole biosynthesis p 99.1 1.9E-10 6.5E-15 101.9 9.6 111 100-216 111-229 (268)
101 1qop_A Tryptophan synthase alp 99.1 3.2E-09 1.1E-13 96.1 17.4 148 52-203 82-242 (268)
102 4a29_A Engineered retro-aldol 99.1 5.1E-09 1.8E-13 92.6 18.0 169 24-203 65-241 (258)
103 1ujp_A Tryptophan synthase alp 99.1 7E-10 2.4E-14 100.4 12.7 151 47-203 75-237 (271)
104 2qjg_A Putative aldolase MJ040 99.1 3.8E-10 1.3E-14 102.3 10.4 172 9-203 32-245 (273)
105 3cu2_A Ribulose-5-phosphate 3- 99.0 2.7E-10 9.3E-15 101.0 7.6 144 53-201 61-223 (237)
106 1qo2_A Molecule: N-((5-phospho 99.0 1E-09 3.5E-14 97.6 11.3 170 23-202 31-230 (241)
107 3jr2_A Hexulose-6-phosphate sy 99.0 8.6E-10 2.9E-14 96.8 10.5 143 53-201 48-200 (218)
108 3ajx_A 3-hexulose-6-phosphate 99.0 5E-09 1.7E-13 90.8 14.9 142 53-203 42-194 (207)
109 2ekc_A AQ_1548, tryptophan syn 99.0 3.6E-09 1.2E-13 95.4 14.3 149 50-203 80-242 (262)
110 1pii_A N-(5'phosphoribosyl)ant 99.0 4.1E-09 1.4E-13 101.5 14.9 141 55-203 100-244 (452)
111 3tha_A Tryptophan synthase alp 99.0 1E-09 3.5E-14 97.8 8.7 132 76-214 105-246 (252)
112 1z41_A YQJM, probable NADH-dep 98.9 5.9E-08 2E-12 90.6 18.5 120 81-203 151-315 (338)
113 2yzr_A Pyridoxal biosynthesis 98.9 8.1E-09 2.8E-13 94.4 11.4 188 22-219 24-296 (330)
114 1jvn_A Glutamine, bifunctional 98.9 1E-08 3.4E-13 102.0 12.6 183 26-215 284-544 (555)
115 3tjx_A Dihydroorotate dehydrog 98.9 1.3E-08 4.5E-13 95.7 12.5 191 5-200 40-311 (354)
116 3tdn_A FLR symmetric alpha-bet 98.9 1.4E-09 4.7E-14 97.2 4.7 170 24-203 37-237 (247)
117 2h6r_A Triosephosphate isomera 98.8 4.2E-08 1.4E-12 86.0 11.6 146 56-203 46-207 (219)
118 2gou_A Oxidoreductase, FMN-bin 98.7 1.6E-06 5.5E-11 81.7 20.6 115 82-203 169-330 (365)
119 1viz_A PCRB protein homolog; s 98.7 5.5E-07 1.9E-11 79.7 15.6 179 1-203 1-218 (240)
120 2r14_A Morphinone reductase; H 98.7 1.7E-06 5.9E-11 81.8 19.6 116 82-203 174-336 (377)
121 1vyr_A Pentaerythritol tetrani 98.6 2.9E-06 9.8E-11 79.9 20.0 74 123-203 257-331 (364)
122 2p10_A MLL9387 protein; putati 98.6 1.1E-06 3.9E-11 78.5 14.9 190 7-202 24-266 (286)
123 2f6u_A GGGPS, (S)-3-O-geranylg 98.5 9.6E-07 3.3E-11 77.8 13.0 169 11-203 11-226 (234)
124 1icp_A OPR1, 12-oxophytodienoa 98.5 6.8E-06 2.3E-10 77.7 18.8 118 81-203 174-338 (376)
125 1mzh_A Deoxyribose-phosphate a 98.5 4.5E-07 1.5E-11 79.7 9.3 110 80-196 76-205 (225)
126 3hgj_A Chromate reductase; TIM 98.5 1.7E-06 5.8E-11 81.0 13.7 120 81-203 159-326 (349)
127 3gr7_A NADPH dehydrogenase; fl 98.5 1.7E-06 5.9E-11 80.7 13.4 120 81-203 151-315 (340)
128 3kts_A Glycerol uptake operon 98.4 6.9E-06 2.4E-10 69.8 15.3 175 1-202 1-186 (192)
129 1q6o_A Humps, 3-keto-L-gulonat 98.4 2E-06 6.7E-11 75.0 12.3 139 54-202 46-198 (216)
130 1ps9_A 2,4-dienoyl-COA reducta 98.4 3.4E-06 1.2E-10 85.7 14.9 120 81-203 148-318 (671)
131 3tdn_A FLR symmetric alpha-bet 98.4 7.2E-07 2.5E-11 79.4 7.9 80 119-203 37-116 (247)
132 3vzx_A Heptaprenylglyceryl pho 98.3 3.9E-06 1.3E-10 73.5 11.5 172 10-203 8-216 (228)
133 3l5l_A Xenobiotic reductase A; 98.3 4.6E-06 1.6E-10 78.5 12.9 120 81-203 165-333 (363)
134 2czd_A Orotidine 5'-phosphate 98.3 2.2E-06 7.4E-11 74.3 9.4 132 55-202 43-192 (208)
135 2agk_A 1-(5-phosphoribosyl)-5- 98.3 4.6E-06 1.6E-10 74.9 11.7 164 23-198 38-239 (260)
136 1hg3_A Triosephosphate isomera 98.3 1.8E-05 6.1E-10 69.3 14.4 123 80-203 81-213 (225)
137 1w8s_A FBP aldolase, fructose- 98.3 9.6E-06 3.3E-10 72.9 12.9 113 79-203 97-239 (263)
138 3w01_A Heptaprenylglyceryl pho 98.3 2.1E-05 7E-10 69.1 14.2 172 9-201 12-220 (235)
139 1w0m_A TIM, triosephosphate is 98.2 1.6E-05 5.4E-10 69.6 13.1 122 80-203 78-210 (226)
140 1o94_A Tmadh, trimethylamine d 98.2 4.7E-05 1.6E-09 78.1 18.3 120 81-203 156-329 (729)
141 3l5a_A NADH/flavin oxidoreduct 98.2 2.9E-05 9.8E-10 74.3 15.4 79 123-203 270-354 (419)
142 3gka_A N-ethylmaleimide reduct 98.2 1.5E-05 5E-10 74.8 12.8 110 81-203 168-324 (361)
143 3exr_A RMPD (hexulose-6-phosph 98.2 1.3E-05 4.4E-10 70.2 10.9 144 55-202 49-203 (221)
144 4ab4_A Xenobiotic reductase B; 98.1 1.7E-05 5.6E-10 74.5 12.1 110 81-203 160-316 (362)
145 3kru_A NADH:flavin oxidoreduct 98.1 3E-05 1E-09 72.3 13.2 119 81-203 150-315 (343)
146 1ka9_F Imidazole glycerol phos 98.1 3.7E-06 1.3E-10 74.8 6.4 78 120-202 34-111 (252)
147 1x1o_A Nicotinate-nucleotide p 98.1 1.6E-05 5.6E-10 72.0 10.2 87 101-200 184-273 (286)
148 3glc_A Aldolase LSRF; TIM barr 98.1 5.5E-05 1.9E-09 68.9 13.5 109 79-202 130-264 (295)
149 3ngj_A Deoxyribose-phosphate a 98.0 0.00016 5.6E-09 63.5 14.4 107 79-193 100-227 (239)
150 2hsa_B 12-oxophytodienoate red 98.0 6.8E-05 2.3E-09 71.4 12.7 78 122-203 265-356 (402)
151 2w6r_A Imidazole glycerol phos 97.9 2E-05 6.9E-10 70.5 8.3 92 119-217 32-123 (266)
152 3oa3_A Aldolase; structural ge 97.9 0.00014 4.7E-09 65.6 13.5 109 79-192 131-260 (288)
153 1o4u_A Type II quinolic acid p 97.9 1.6E-05 5.4E-10 72.0 7.3 91 100-202 180-275 (285)
154 1to3_A Putative aldolase YIHT; 97.9 6.2E-05 2.1E-09 69.0 11.2 117 78-201 112-260 (304)
155 1qo2_A Molecule: N-((5-phospho 97.9 7.3E-06 2.5E-10 72.5 4.7 79 119-203 32-110 (241)
156 4gj1_A 1-(5-phosphoribosyl)-5- 97.9 0.00031 1E-08 62.2 14.7 141 53-200 65-229 (243)
157 2b7n_A Probable nicotinate-nuc 97.9 3.2E-05 1.1E-09 69.8 8.3 88 100-199 169-261 (273)
158 3vk5_A MOEO5; TIM barrel, tran 97.9 3.8E-05 1.3E-09 68.8 8.6 171 13-201 43-262 (286)
159 1ub3_A Aldolase protein; schif 97.9 0.00022 7.6E-09 62.1 13.3 114 79-199 76-211 (220)
160 1thf_D HISF protein; thermophI 97.9 2.3E-05 7.8E-10 69.6 6.8 78 120-202 33-110 (253)
161 1qpo_A Quinolinate acid phosph 97.8 5.6E-05 1.9E-09 68.4 9.4 91 100-200 182-274 (284)
162 2qr6_A IMP dehydrogenase/GMP r 97.8 7.3E-05 2.5E-09 71.0 10.5 91 101-196 146-240 (393)
163 1vkf_A Glycerol uptake operon 97.8 0.00058 2E-08 57.6 14.8 131 50-201 44-183 (188)
164 3tqv_A Nicotinate-nucleotide p 97.8 8.6E-05 2.9E-09 67.0 9.5 86 100-198 186-273 (287)
165 3paj_A Nicotinate-nucleotide p 97.7 0.00021 7E-09 65.4 11.1 85 100-197 219-305 (320)
166 1h5y_A HISF; histidine biosynt 97.7 5.4E-05 1.9E-09 66.7 7.0 78 119-201 35-112 (253)
167 3l0g_A Nicotinate-nucleotide p 97.7 0.00027 9.2E-09 63.9 10.8 86 100-198 195-282 (300)
168 2jbm_A Nicotinate-nucleotide p 97.7 9.3E-05 3.2E-09 67.6 7.9 76 111-198 198-275 (299)
169 1qap_A Quinolinic acid phospho 97.7 0.00013 4.5E-09 66.4 8.8 85 101-198 197-283 (296)
170 3cwo_X Beta/alpha-barrel prote 97.7 0.00031 1.1E-08 60.7 11.0 89 121-217 134-223 (237)
171 3aty_A Tcoye, prostaglandin F2 97.6 0.00038 1.3E-08 65.7 11.7 72 123-203 272-344 (379)
172 3gnn_A Nicotinate-nucleotide p 97.6 0.00021 7.2E-09 64.8 9.0 85 100-197 197-283 (298)
173 3r12_A Deoxyribose-phosphate a 97.6 0.0013 4.5E-08 58.4 13.8 105 80-192 117-242 (260)
174 2y88_A Phosphoribosyl isomeras 97.6 0.00011 3.7E-09 64.8 6.9 78 119-202 33-110 (244)
175 1wa3_A 2-keto-3-deoxy-6-phosph 97.6 0.00093 3.2E-08 57.2 12.2 100 78-194 26-130 (205)
176 1vzw_A Phosphoribosyl isomeras 97.5 0.00012 4.1E-09 64.6 6.5 77 120-202 35-111 (244)
177 3c2e_A Nicotinate-nucleotide p 97.5 8.9E-05 3E-09 67.5 5.3 76 111-198 200-280 (294)
178 1eix_A Orotidine 5'-monophosph 97.4 8.1E-05 2.8E-09 66.1 3.7 140 54-202 57-228 (245)
179 3ndo_A Deoxyribose-phosphate a 97.4 0.0012 4.2E-08 57.7 11.0 106 79-192 85-216 (231)
180 3k30_A Histamine dehydrogenase 97.4 0.00062 2.1E-08 69.2 10.6 157 81-246 163-374 (690)
181 2yyu_A Orotidine 5'-phosphate 97.3 0.00061 2.1E-08 60.4 8.5 141 54-202 47-222 (246)
182 4e38_A Keto-hydroxyglutarate-a 97.2 0.0049 1.7E-07 53.9 13.1 100 78-194 50-153 (232)
183 3iwp_A Copper homeostasis prot 97.2 0.011 3.6E-07 53.2 15.0 159 23-194 47-237 (287)
184 4gj1_A 1-(5-phosphoribosyl)-5- 97.1 0.00061 2.1E-08 60.3 6.2 79 120-203 34-112 (243)
185 3r2g_A Inosine 5'-monophosphat 97.1 0.0063 2.1E-07 56.8 12.8 110 77-195 56-169 (361)
186 3tjl_A NADPH dehydrogenase; OL 97.0 0.0012 4.1E-08 62.7 7.5 74 127-203 274-354 (407)
187 3lab_A Putative KDPG (2-keto-3 97.0 0.0088 3E-07 51.7 12.2 118 78-217 29-156 (217)
188 1gvf_A Tagatose-bisphosphate a 96.9 0.078 2.7E-06 47.7 18.2 149 48-201 59-238 (286)
189 1vcv_A Probable deoxyribose-ph 96.9 0.035 1.2E-06 48.3 15.1 106 80-190 73-211 (226)
190 1dbt_A Orotidine 5'-phosphate 96.8 0.00032 1.1E-08 61.9 1.3 143 54-202 46-221 (239)
191 3nvt_A 3-deoxy-D-arabino-heptu 96.6 0.091 3.1E-06 49.4 17.0 175 11-198 143-349 (385)
192 1vc4_A Indole-3-glycerol phosp 96.6 0.0099 3.4E-07 52.8 9.7 73 120-200 68-140 (254)
193 3m47_A Orotidine 5'-phosphate 96.5 0.063 2.2E-06 46.7 14.0 110 78-202 82-209 (228)
194 3vav_A 3-methyl-2-oxobutanoate 96.4 0.13 4.3E-06 46.0 15.7 144 11-173 29-215 (275)
195 1vhc_A Putative KHG/KDPG aldol 96.4 0.05 1.7E-06 47.2 12.9 118 78-217 33-154 (224)
196 3q94_A Fructose-bisphosphate a 96.4 0.3 1E-05 43.9 18.1 135 62-200 79-241 (288)
197 2isw_A Putative fructose-1,6-b 96.4 0.23 7.9E-06 45.3 17.3 144 51-199 62-259 (323)
198 1ypf_A GMP reductase; GUAC, pu 96.3 0.034 1.1E-06 51.4 11.9 88 100-195 84-177 (336)
199 3qja_A IGPS, indole-3-glycerol 96.3 0.011 3.7E-07 53.1 7.8 73 120-200 75-147 (272)
200 4af0_A Inosine-5'-monophosphat 96.2 0.0094 3.2E-07 58.0 7.7 180 3-195 85-350 (556)
201 1o66_A 3-methyl-2-oxobutanoate 96.2 0.27 9.3E-06 43.8 16.6 146 11-174 17-204 (275)
202 1n7k_A Deoxyribose-phosphate a 96.2 0.0084 2.9E-07 52.5 6.7 110 79-197 93-225 (234)
203 4fo4_A Inosine 5'-monophosphat 96.2 0.11 3.9E-06 48.4 14.6 101 85-195 69-177 (366)
204 1jvn_A Glutamine, bifunctional 96.2 0.009 3.1E-07 59.1 7.4 78 120-200 283-372 (555)
205 1wbh_A KHG/KDPG aldolase; lyas 96.1 0.17 5.7E-06 43.5 14.6 118 78-217 32-153 (214)
206 3ve9_A Orotidine-5'-phosphate 96.1 0.025 8.6E-07 48.8 9.2 133 55-203 42-188 (215)
207 3ih1_A Methylisocitrate lyase; 96.1 0.25 8.5E-06 44.9 15.9 168 21-201 35-249 (305)
208 2yw3_A 4-hydroxy-2-oxoglutarat 96.0 0.14 4.8E-06 43.8 13.4 101 77-194 28-130 (207)
209 1rvg_A Fructose-1,6-bisphospha 96.0 0.76 2.6E-05 41.6 18.5 131 50-185 60-221 (305)
210 3fs2_A 2-dehydro-3-deoxyphosph 96.0 0.36 1.2E-05 43.5 16.3 175 11-198 42-263 (298)
211 2agk_A 1-(5-phosphoribosyl)-5- 96.0 0.0065 2.2E-07 54.2 4.8 71 118-201 38-109 (260)
212 3iv3_A Tagatose 1,6-diphosphat 95.9 0.04 1.4E-06 50.6 10.1 118 80-201 116-286 (332)
213 3n9r_A Fructose-bisphosphate a 95.9 0.63 2.2E-05 42.1 17.5 133 49-185 59-223 (307)
214 3ru6_A Orotidine 5'-phosphate 95.9 0.18 6.2E-06 45.7 14.0 107 79-203 95-238 (303)
215 3tsm_A IGPS, indole-3-glycerol 95.8 0.032 1.1E-06 49.9 8.8 72 120-199 82-153 (272)
216 4fxs_A Inosine-5'-monophosphat 95.8 0.17 5.7E-06 49.3 14.5 116 17-136 225-362 (496)
217 1twd_A Copper homeostasis prot 95.8 0.53 1.8E-05 41.4 16.0 161 23-197 9-200 (256)
218 2ftp_A Hydroxymethylglutaryl-C 95.7 0.2 6.7E-06 45.4 13.9 131 54-194 67-234 (302)
219 1yya_A Triosephosphate isomera 95.7 0.056 1.9E-06 47.7 9.4 119 79-201 78-239 (250)
220 3iwp_A Copper homeostasis prot 95.6 0.045 1.6E-06 49.1 8.9 96 111-216 40-149 (287)
221 1aw2_A Triosephosphate isomera 95.6 0.035 1.2E-06 49.1 8.2 119 79-201 81-241 (256)
222 1xg4_A Probable methylisocitra 95.6 0.25 8.7E-06 44.6 14.0 181 4-201 10-241 (295)
223 1mxs_A KDPG aldolase; 2-keto-3 95.6 0.12 4.1E-06 44.9 11.5 100 78-194 42-145 (225)
224 1m3u_A 3-methyl-2-oxobutanoate 95.6 0.4 1.4E-05 42.5 14.8 146 11-174 17-204 (264)
225 3usb_A Inosine-5'-monophosphat 95.6 0.038 1.3E-06 54.0 9.0 183 2-195 59-325 (511)
226 1vs1_A 3-deoxy-7-phosphoheptul 95.6 0.84 2.9E-05 40.7 17.1 137 53-198 92-245 (276)
227 3ffs_A Inosine-5-monophosphate 95.6 0.24 8.3E-06 46.7 14.1 109 22-136 143-274 (400)
228 1eep_A Inosine 5'-monophosphat 95.5 0.26 8.9E-06 46.5 14.5 108 24-136 154-284 (404)
229 3khj_A Inosine-5-monophosphate 95.5 0.3 1E-05 45.4 14.6 110 22-136 104-235 (361)
230 2a4a_A Deoxyribose-phosphate a 95.5 0.019 6.6E-07 51.5 6.1 109 79-190 111-249 (281)
231 1vr6_A Phospho-2-dehydro-3-deo 95.5 1.1 3.7E-05 41.4 17.8 137 53-198 160-313 (350)
232 3b8i_A PA4872 oxaloacetate dec 95.4 0.73 2.5E-05 41.4 16.2 181 3-200 13-239 (287)
233 4adt_A Pyridoxine biosynthetic 95.4 0.051 1.8E-06 49.2 8.7 76 112-192 23-104 (297)
234 1twd_A Copper homeostasis prot 95.4 0.06 2E-06 47.5 8.7 97 115-221 6-117 (256)
235 4avf_A Inosine-5'-monophosphat 95.4 0.19 6.5E-06 48.8 13.2 110 22-136 228-360 (490)
236 1oy0_A Ketopantoate hydroxymet 95.3 0.28 9.7E-06 43.8 12.8 145 11-174 34-222 (281)
237 1tre_A Triosephosphate isomera 95.2 0.074 2.5E-06 47.0 8.8 119 79-201 79-239 (255)
238 4dbe_A Orotidine 5'-phosphate 95.2 0.26 8.7E-06 42.7 12.1 100 89-203 80-195 (222)
239 2yc6_A Triosephosphate isomera 95.2 0.15 5.1E-06 45.1 10.6 119 79-201 80-243 (257)
240 1p1x_A Deoxyribose-phosphate a 95.1 0.033 1.1E-06 49.5 6.1 109 79-190 90-222 (260)
241 3f4w_A Putative hexulose 6 pho 94.9 0.32 1.1E-05 41.2 11.7 122 10-136 53-186 (211)
242 3q58_A N-acetylmannosamine-6-p 94.9 0.45 1.5E-05 41.3 12.8 108 24-136 90-209 (229)
243 1yxy_A Putative N-acetylmannos 94.9 0.52 1.8E-05 40.6 13.3 105 78-192 40-157 (234)
244 2qiw_A PEP phosphonomutase; st 94.9 0.76 2.6E-05 40.5 14.4 178 3-197 12-238 (255)
245 2i9e_A Triosephosphate isomera 94.8 0.26 8.8E-06 43.6 11.1 127 79-215 78-245 (259)
246 3fok_A Uncharacterized protein 94.8 0.43 1.5E-05 43.0 12.7 106 79-200 133-278 (307)
247 2bdq_A Copper homeostasis prot 94.8 1.2 4E-05 38.4 14.8 117 79-203 81-214 (224)
248 1jub_A Dihydroorotate dehydrog 94.7 0.25 8.5E-06 44.7 11.3 90 47-136 142-270 (311)
249 2btm_A TIM, protein (triosepho 94.7 0.082 2.8E-06 46.6 7.6 118 79-201 78-239 (252)
250 2wqp_A Polysialic acid capsule 94.7 0.67 2.3E-05 42.8 14.1 134 76-216 113-263 (349)
251 2jgq_A Triosephosphate isomera 94.7 0.21 7.1E-06 43.5 10.0 118 79-201 73-223 (233)
252 3to5_A CHEY homolog; alpha(5)b 94.7 0.38 1.3E-05 37.9 10.9 85 104-194 30-115 (134)
253 3igs_A N-acetylmannosamine-6-p 94.7 0.58 2E-05 40.6 13.0 108 24-136 90-209 (232)
254 3hzh_A Chemotaxis response reg 94.6 0.46 1.6E-05 37.6 11.6 84 103-194 53-139 (157)
255 2c6q_A GMP reductase 2; TIM ba 94.5 0.45 1.5E-05 44.0 12.6 87 47-136 144-251 (351)
256 1p0k_A Isopentenyl-diphosphate 94.5 0.43 1.5E-05 44.0 12.4 86 51-136 166-279 (349)
257 1vli_A Spore coat polysacchari 94.4 1.1 3.8E-05 41.8 14.8 143 67-216 114-275 (385)
258 3tfx_A Orotidine 5'-phosphate 94.3 0.51 1.8E-05 41.7 11.9 162 22-203 13-224 (259)
259 1o5x_A TIM, triosephosphate is 94.3 0.2 6.9E-06 44.0 9.2 117 79-200 79-237 (248)
260 3l21_A DHDPS, dihydrodipicolin 94.3 0.13 4.5E-06 46.7 8.3 79 123-202 42-124 (304)
261 1vrd_A Inosine-5'-monophosphat 94.3 0.78 2.7E-05 44.3 14.3 110 24-136 238-368 (494)
262 2j27_A Triosephosphate isomera 94.3 0.26 9.1E-06 43.3 9.8 117 79-200 79-239 (250)
263 3eoo_A Methylisocitrate lyase; 94.3 2.6 9E-05 37.9 16.7 168 21-201 28-245 (298)
264 3sz8_A 2-dehydro-3-deoxyphosph 94.2 1.1 3.6E-05 40.2 13.9 137 53-198 81-244 (285)
265 3sr7_A Isopentenyl-diphosphate 94.2 0.4 1.4E-05 44.7 11.5 89 48-136 191-306 (365)
266 1mo0_A TIM, triosephosphate is 94.2 0.18 6.2E-06 44.9 8.7 128 79-217 98-267 (275)
267 1vqt_A Orotidine 5'-phosphate 94.2 0.067 2.3E-06 46.1 5.7 103 78-203 76-200 (213)
268 3flu_A DHDPS, dihydrodipicolin 94.1 0.13 4.3E-06 46.6 7.8 79 122-201 33-115 (297)
269 1r2r_A TIM, triosephosphate is 94.1 0.22 7.5E-06 43.8 9.0 118 79-201 79-238 (248)
270 2e6f_A Dihydroorotate dehydrog 94.0 0.28 9.6E-06 44.4 10.0 90 47-136 144-272 (314)
271 3gl9_A Response regulator; bet 94.0 0.76 2.6E-05 34.5 11.2 84 104-194 20-104 (122)
272 1ydn_A Hydroxymethylglutaryl-C 94.0 0.82 2.8E-05 41.0 13.0 133 52-194 61-230 (295)
273 2ojp_A DHDPS, dihydrodipicolin 94.0 0.16 5.5E-06 45.8 8.3 79 122-201 27-109 (292)
274 3jte_A Response regulator rece 94.0 1 3.5E-05 34.6 12.1 83 103-194 20-105 (143)
275 1xky_A Dihydrodipicolinate syn 94.0 0.17 5.8E-06 45.9 8.3 78 123-201 39-120 (301)
276 3s1x_A Probable transaldolase; 94.0 1.2 4.1E-05 38.4 13.2 137 52-195 43-188 (223)
277 4a3u_A NCR, NADH\:flavin oxido 93.9 0.14 4.9E-06 47.5 7.9 76 123-203 247-323 (358)
278 1jcn_A Inosine monophosphate d 93.9 0.97 3.3E-05 43.9 14.2 109 24-136 256-386 (514)
279 1zlp_A PSR132, petal death pro 93.9 2.1 7.1E-05 39.0 15.3 167 21-200 45-262 (318)
280 2ze3_A DFA0005; organic waste 93.8 0.68 2.3E-05 41.3 11.6 166 21-200 22-237 (275)
281 2v82_A 2-dehydro-3-deoxy-6-pho 93.7 0.87 3E-05 38.5 12.0 115 63-194 6-127 (212)
282 3g8r_A Probable spore coat pol 93.7 2.5 8.5E-05 39.0 15.6 143 62-216 90-251 (350)
283 2htm_A Thiazole biosynthesis p 93.7 0.36 1.2E-05 42.7 9.5 128 3-136 57-206 (268)
284 3b0p_A TRNA-dihydrouridine syn 93.7 0.85 2.9E-05 42.1 12.7 89 47-136 110-224 (350)
285 1f76_A Dihydroorotate dehydrog 93.7 0.43 1.5E-05 43.7 10.6 90 47-136 186-317 (336)
286 3m9y_A Triosephosphate isomera 93.6 0.58 2E-05 41.2 10.7 118 79-201 82-243 (254)
287 1b9b_A TIM, protein (triosepho 93.6 0.33 1.1E-05 42.8 9.1 118 79-201 80-241 (255)
288 1xm3_A Thiazole biosynthesis p 93.6 0.65 2.2E-05 41.1 11.2 125 9-136 64-206 (264)
289 3qze_A DHDPS, dihydrodipicolin 93.6 0.14 4.9E-06 46.7 7.0 78 123-201 50-131 (314)
290 3pm6_A Putative fructose-bisph 93.5 4.1 0.00014 36.7 16.4 135 63-199 82-255 (306)
291 1qwg_A PSL synthase;, (2R)-pho 93.5 0.32 1.1E-05 42.6 8.7 97 46-143 52-174 (251)
292 1ep3_A Dihydroorotate dehydrog 93.4 0.87 3E-05 40.9 12.1 90 47-136 148-269 (311)
293 3eb2_A Putative dihydrodipicol 93.4 0.1 3.5E-06 47.3 5.8 121 123-249 31-156 (300)
294 1zco_A 2-dehydro-3-deoxyphosph 93.3 4 0.00014 36.0 18.7 138 53-199 77-231 (262)
295 3na8_A Putative dihydrodipicol 93.3 0.13 4.4E-06 47.0 6.3 119 123-247 51-174 (315)
296 1o5k_A DHDPS, dihydrodipicolin 93.3 0.21 7.2E-06 45.3 7.7 78 123-201 39-120 (306)
297 2vxn_A Triosephosphate isomera 93.3 0.61 2.1E-05 41.0 10.3 117 79-200 80-240 (251)
298 3r8r_A Transaldolase; pentose 93.2 1.2 4.1E-05 38.1 11.9 137 52-195 41-186 (212)
299 2v5j_A 2,4-dihydroxyhept-2-ENE 93.2 3.7 0.00013 36.7 15.7 170 21-198 46-261 (287)
300 3eul_A Possible nitrate/nitrit 93.2 1 3.4E-05 35.2 10.9 83 104-194 33-117 (152)
301 2bdq_A Copper homeostasis prot 93.2 0.062 2.1E-06 46.4 3.7 98 116-223 7-122 (224)
302 1tmy_A CHEY protein, TMY; chem 93.2 1.7 5.9E-05 32.0 11.8 83 104-194 20-103 (120)
303 3cz5_A Two-component response 93.1 1 3.6E-05 35.1 10.9 82 105-194 24-107 (153)
304 3zwt_A Dihydroorotate dehydrog 93.1 0.65 2.2E-05 43.2 10.9 90 47-136 197-326 (367)
305 3ble_A Citramalate synthase fr 93.1 4.1 0.00014 37.2 16.2 111 78-194 100-244 (337)
306 1m6j_A TIM, TPI, triosephospha 93.1 0.32 1.1E-05 43.1 8.3 119 79-201 86-247 (261)
307 3nav_A Tryptophan synthase alp 93.1 1.1 3.6E-05 40.0 11.8 122 9-136 96-236 (271)
308 3qvq_A Phosphodiesterase OLEI0 93.1 0.58 2E-05 41.0 10.1 59 79-137 179-238 (252)
309 1nvm_A HOA, 4-hydroxy-2-oxoval 93.1 2.3 7.8E-05 39.1 14.5 137 53-194 71-225 (345)
310 3cnb_A DNA-binding response re 93.1 1.5 5E-05 33.5 11.5 86 103-194 25-112 (143)
311 3cpr_A Dihydrodipicolinate syn 93.1 0.41 1.4E-05 43.4 9.2 79 122-201 42-124 (304)
312 3sgz_A Hydroxyacid oxidase 2; 93.0 0.99 3.4E-05 41.7 11.8 81 53-136 207-300 (352)
313 3daq_A DHDPS, dihydrodipicolin 93.0 0.31 1.1E-05 43.9 8.3 122 122-249 28-154 (292)
314 2nzl_A Hydroxyacid oxidase 1; 92.9 0.78 2.7E-05 43.1 11.2 81 53-136 242-335 (392)
315 3fkr_A L-2-keto-3-deoxyarabona 92.8 0.19 6.4E-06 45.8 6.6 119 123-248 35-161 (309)
316 2ehh_A DHDPS, dihydrodipicolin 92.8 0.4 1.4E-05 43.2 8.8 79 122-201 26-108 (294)
317 2rfg_A Dihydrodipicolinate syn 92.8 0.16 5.5E-06 45.9 6.2 79 122-201 26-108 (297)
318 1s2w_A Phosphoenolpyruvate pho 92.8 4.5 0.00015 36.3 15.6 185 3-201 11-244 (295)
319 3b4u_A Dihydrodipicolinate syn 92.8 0.21 7.2E-06 45.1 6.9 79 122-201 29-111 (294)
320 3lua_A Response regulator rece 92.8 0.71 2.4E-05 35.4 9.2 84 103-194 21-109 (140)
321 3tak_A DHDPS, dihydrodipicolin 92.7 0.38 1.3E-05 43.3 8.5 78 123-201 28-109 (291)
322 3h1g_A Chemotaxis protein CHEY 92.7 1.2 4.2E-05 33.6 10.4 85 104-194 23-109 (129)
323 2yxg_A DHDPS, dihydrodipicolin 92.7 0.42 1.4E-05 42.9 8.7 79 122-201 26-108 (289)
324 2nli_A Lactate oxidase; flavoe 92.7 0.92 3.1E-05 42.2 11.3 81 53-136 219-312 (368)
325 3o07_A Pyridoxine biosynthesis 92.7 0.42 1.4E-05 42.5 8.4 76 112-192 13-94 (291)
326 3eod_A Protein HNR; response r 92.6 1.2 4.2E-05 33.5 10.3 83 103-194 24-107 (130)
327 2wkj_A N-acetylneuraminate lya 92.6 0.44 1.5E-05 43.1 8.8 78 123-201 38-119 (303)
328 2qkf_A 3-deoxy-D-manno-octulos 92.5 4.4 0.00015 36.1 15.1 137 54-199 77-240 (280)
329 3tml_A 2-dehydro-3-deoxyphosph 92.5 0.79 2.7E-05 41.1 10.1 134 54-198 79-245 (288)
330 3a5f_A Dihydrodipicolinate syn 92.5 0.43 1.5E-05 42.9 8.6 79 122-201 27-109 (291)
331 3vav_A 3-methyl-2-oxobutanoate 92.5 1.3 4.6E-05 39.3 11.5 89 103-194 21-125 (275)
332 3qst_A Triosephosphate isomera 92.5 0.58 2E-05 41.2 9.1 118 79-200 81-241 (255)
333 2qxy_A Response regulator; reg 92.5 0.98 3.4E-05 34.6 9.8 80 104-193 22-102 (142)
334 1f6k_A N-acetylneuraminate lya 92.5 0.4 1.4E-05 43.1 8.3 79 122-201 29-112 (293)
335 3rqi_A Response regulator prot 92.5 1 3.5E-05 36.7 10.3 82 104-194 25-107 (184)
336 3h5d_A DHDPS, dihydrodipicolin 92.5 0.31 1.1E-05 44.3 7.6 122 122-249 33-160 (311)
337 2pgw_A Muconate cycloisomerase 92.4 1.2 3.9E-05 41.6 11.7 108 80-199 155-275 (384)
338 2r8w_A AGR_C_1641P; APC7498, d 92.4 0.41 1.4E-05 43.9 8.4 78 123-201 61-142 (332)
339 3gr7_A NADPH dehydrogenase; fl 92.4 2 6.7E-05 39.5 13.0 86 51-136 197-306 (340)
340 3cg0_A Response regulator rece 92.4 2 6.9E-05 32.5 11.4 83 104-194 27-110 (140)
341 1m5w_A Pyridoxal phosphate bio 92.4 2.4 8.3E-05 36.7 12.5 170 22-199 24-219 (243)
342 2zbt_A Pyridoxal biosynthesis 92.4 0.39 1.3E-05 43.1 8.1 80 111-196 22-107 (297)
343 3f6c_A Positive transcription 92.3 0.66 2.2E-05 35.2 8.4 98 103-216 18-116 (134)
344 1mzh_A Deoxyribose-phosphate a 92.3 1.2 4.2E-05 38.3 10.9 87 47-134 100-201 (225)
345 3oix_A Putative dihydroorotate 92.3 0.61 2.1E-05 43.0 9.4 90 47-136 177-303 (345)
346 1gox_A (S)-2-hydroxy-acid oxid 92.3 0.83 2.8E-05 42.5 10.5 81 53-136 215-308 (370)
347 1dxe_A 2-dehydro-3-deoxy-galac 92.3 5.4 0.00018 34.8 16.4 183 5-197 12-239 (256)
348 2hjp_A Phosphonopyruvate hydro 92.3 1.2 4E-05 40.1 11.0 89 103-194 7-109 (290)
349 3th6_A Triosephosphate isomera 92.3 1.5 5E-05 38.5 11.3 117 79-200 79-237 (249)
350 3si9_A DHDPS, dihydrodipicolin 92.2 0.4 1.4E-05 43.7 8.0 121 123-249 49-174 (315)
351 1vhn_A Putative flavin oxidore 92.1 0.41 1.4E-05 43.6 8.0 89 47-136 110-212 (318)
352 1ney_A TIM, triosephosphate is 92.1 0.67 2.3E-05 40.6 8.9 118 79-200 78-236 (247)
353 3krs_A Triosephosphate isomera 92.1 0.74 2.5E-05 40.9 9.3 118 79-200 102-260 (271)
354 2nv1_A Pyridoxal biosynthesis 92.0 0.76 2.6E-05 41.5 9.7 79 113-199 24-110 (305)
355 1o60_A 2-dehydro-3-deoxyphosph 92.0 3.3 0.00011 37.2 13.6 136 54-198 80-242 (292)
356 3hdv_A Response regulator; PSI 92.0 1.3 4.3E-05 33.7 9.7 84 103-194 24-109 (136)
357 2v9d_A YAGE; dihydrodipicolini 91.9 0.48 1.6E-05 43.7 8.3 79 122-201 57-139 (343)
358 2p10_A MLL9387 protein; putati 91.9 4.2 0.00014 36.2 13.9 121 10-136 94-258 (286)
359 3vnd_A TSA, tryptophan synthas 91.9 2.1 7.3E-05 37.9 12.1 120 9-136 94-234 (267)
360 1xg4_A Probable methylisocitra 91.9 1.6 5.4E-05 39.3 11.4 91 102-195 8-114 (295)
361 1qop_A Tryptophan synthase alp 91.9 2.9 0.0001 36.8 13.1 108 25-136 112-233 (268)
362 3qfe_A Putative dihydrodipicol 91.8 0.29 1E-05 44.7 6.6 121 122-248 37-165 (318)
363 3f6p_A Transcriptional regulat 91.7 1.9 6.4E-05 32.1 10.3 81 104-194 20-101 (120)
364 3t6k_A Response regulator rece 91.7 2.4 8.1E-05 32.4 11.1 84 104-194 22-106 (136)
365 2hjp_A Phosphonopyruvate hydro 91.6 4.7 0.00016 36.1 14.2 183 4-200 8-240 (290)
366 3kht_A Response regulator; PSI 91.6 2.1 7E-05 32.9 10.7 85 104-194 23-109 (144)
367 1dbw_A Transcriptional regulat 91.6 2.8 9.5E-05 31.2 11.3 82 104-194 21-103 (126)
368 3crn_A Response regulator rece 91.6 2.9 9.8E-05 31.6 11.4 82 104-194 21-103 (132)
369 3m5v_A DHDPS, dihydrodipicolin 91.6 0.61 2.1E-05 42.1 8.5 80 122-201 33-116 (301)
370 2r25_B Osmosensing histidine p 91.6 2.5 8.5E-05 32.1 11.1 83 105-194 21-109 (133)
371 1ydo_A HMG-COA lyase; TIM-barr 91.6 2.3 7.9E-05 38.4 12.4 112 76-193 83-231 (307)
372 2otd_A Glycerophosphodiester p 91.6 1.1 3.8E-05 38.9 10.0 60 80-139 177-237 (247)
373 1k68_A Phytochrome response re 91.6 2.1 7E-05 32.3 10.6 86 103-194 19-113 (140)
374 3dz1_A Dihydrodipicolinate syn 91.6 0.32 1.1E-05 44.3 6.6 120 123-248 35-159 (313)
375 2cw6_A Hydroxymethylglutaryl-C 91.6 5.5 0.00019 35.6 14.8 122 76-205 82-240 (298)
376 4dpp_A DHDPS 2, dihydrodipicol 91.6 0.73 2.5E-05 42.8 9.0 78 123-201 86-167 (360)
377 2rjn_A Response regulator rece 91.5 2.6 8.9E-05 32.8 11.4 82 104-194 25-108 (154)
378 1y0e_A Putative N-acetylmannos 91.4 5.1 0.00018 33.8 13.9 110 78-199 27-150 (223)
379 3heb_A Response regulator rece 91.4 1.8 6.1E-05 33.6 10.3 85 104-194 22-117 (152)
380 3mm4_A Histidine kinase homolo 91.4 1.9 6.5E-05 35.9 11.0 85 104-194 79-180 (206)
381 3s5o_A 4-hydroxy-2-oxoglutarat 91.4 0.44 1.5E-05 43.3 7.3 121 123-249 41-168 (307)
382 1jbe_A Chemotaxis protein CHEY 91.4 2.9 9.9E-05 31.1 11.1 85 104-194 22-107 (128)
383 3ngj_A Deoxyribose-phosphate a 91.4 1 3.5E-05 39.2 9.3 78 120-199 98-181 (239)
384 2i1o_A Nicotinate phosphoribos 91.4 0.65 2.2E-05 43.7 8.6 83 111-199 211-302 (398)
385 3r0j_A Possible two component 91.4 2.1 7.2E-05 36.7 11.5 82 104-194 41-123 (250)
386 2qsj_A DNA-binding response re 91.4 1.4 4.6E-05 34.4 9.5 82 104-193 21-105 (154)
387 4dad_A Putative pilus assembly 91.4 1 3.5E-05 34.8 8.7 83 104-194 38-123 (146)
388 1qkk_A DCTD, C4-dicarboxylate 91.3 1.7 5.8E-05 33.9 10.1 83 103-194 20-103 (155)
389 1tv5_A Dhodehase, dihydroorota 91.3 1.5 5.1E-05 41.9 11.2 74 63-136 296-401 (443)
390 3e96_A Dihydrodipicolinate syn 91.3 0.31 1.1E-05 44.5 6.2 76 123-200 39-118 (316)
391 4e7p_A Response regulator; DNA 91.3 2.6 9E-05 32.6 11.2 81 106-194 40-122 (150)
392 3gt7_A Sensor protein; structu 91.3 2.1 7.2E-05 33.5 10.6 85 103-194 24-109 (154)
393 2vc6_A MOSA, dihydrodipicolina 91.3 0.42 1.4E-05 43.0 7.0 79 122-201 26-108 (292)
394 1zfj_A Inosine monophosphate d 91.2 5.7 0.00019 38.1 15.5 110 24-136 234-364 (491)
395 3luf_A Two-component system re 91.2 6.2 0.00021 34.1 14.5 83 105-194 143-227 (259)
396 4ef8_A Dihydroorotate dehydrog 91.1 1 3.5E-05 41.7 9.6 90 47-136 177-305 (354)
397 3hdg_A Uncharacterized protein 91.1 2 6.7E-05 32.6 10.0 81 104-193 25-106 (137)
398 3hv2_A Response regulator/HD d 91.0 2.8 9.4E-05 32.6 11.1 82 104-194 32-115 (153)
399 1mdl_A Mandelate racemase; iso 90.9 2.5 8.5E-05 38.8 12.2 107 80-198 152-273 (359)
400 2nx9_A Oxaloacetate decarboxyl 90.9 3.6 0.00012 39.5 13.5 112 77-195 103-233 (464)
401 2zay_A Response regulator rece 90.9 1.9 6.5E-05 33.1 9.9 87 101-194 23-110 (147)
402 1vcf_A Isopentenyl-diphosphate 90.9 1.2 4E-05 40.7 9.8 85 51-136 170-284 (332)
403 3b8i_A PA4872 oxaloacetate dec 90.8 1.4 4.8E-05 39.5 9.9 90 103-195 13-117 (287)
404 3d0c_A Dihydrodipicolinate syn 90.7 0.45 1.5E-05 43.3 6.7 77 123-201 39-119 (314)
405 3g8r_A Probable spore coat pol 90.7 1.8 6.1E-05 39.9 10.7 74 101-186 82-155 (350)
406 3i65_A Dihydroorotate dehydrog 90.7 1 3.5E-05 42.6 9.2 90 47-136 232-373 (415)
407 1zlp_A PSR132, petal death pro 90.6 1.4 5E-05 40.0 9.9 90 104-195 33-136 (318)
408 2qr3_A Two-component system re 90.6 2 6.8E-05 32.6 9.6 87 104-194 21-108 (140)
409 1k66_A Phytochrome response re 90.6 1.8 6.2E-05 33.1 9.4 85 104-194 24-120 (149)
410 2yxb_A Coenzyme B12-dependent 90.5 2 7E-05 34.8 9.9 81 105-194 41-127 (161)
411 2pz0_A Glycerophosphoryl diest 90.5 1.1 3.8E-05 39.1 8.8 57 80-136 181-238 (252)
412 1kbi_A Cytochrome B2, L-LCR; f 90.4 2 6.7E-05 41.8 11.3 81 53-136 333-431 (511)
413 2fiq_A Putative tagatose 6-pho 90.4 4.3 0.00015 38.3 13.2 176 21-201 20-287 (420)
414 3qz6_A HPCH/HPAI aldolase; str 90.4 3.6 0.00012 36.2 12.1 188 2-197 5-238 (261)
415 3eoo_A Methylisocitrate lyase; 90.3 2.4 8.2E-05 38.2 11.0 93 102-197 13-120 (298)
416 2ze3_A DFA0005; organic waste 90.1 1.6 5.4E-05 38.9 9.6 88 103-194 10-111 (275)
417 3ajx_A 3-hexulose-6-phosphate 90.1 3.4 0.00012 34.5 11.4 122 10-136 53-185 (207)
418 3o6c_A PNP synthase, pyridoxin 90.1 4.1 0.00014 35.6 11.8 111 22-136 24-151 (260)
419 2qiw_A PEP phosphonomutase; st 90.0 1.9 6.4E-05 38.0 9.8 90 102-194 11-112 (255)
420 1srr_A SPO0F, sporulation resp 90.0 4 0.00014 30.2 10.7 82 104-194 21-103 (124)
421 3hgj_A Chromate reductase; TIM 90.0 4.9 0.00017 36.9 13.2 86 51-136 205-317 (349)
422 2v5b_A Triosephosphate isomera 89.9 2.5 8.6E-05 36.9 10.4 122 77-200 71-233 (244)
423 3kcn_A Adenylate cyclase homol 89.9 4.1 0.00014 31.5 11.1 77 109-194 26-105 (151)
424 1oy0_A Ketopantoate hydroxymet 89.8 4.8 0.00016 35.9 12.3 89 102-194 25-132 (281)
425 3o63_A Probable thiamine-phosp 89.8 2.3 7.9E-05 37.1 10.2 105 77-200 46-167 (243)
426 1o66_A 3-methyl-2-oxobutanoate 89.8 3.3 0.00011 36.8 11.2 89 103-194 9-114 (275)
427 2pl1_A Transcriptional regulat 89.7 4.6 0.00016 29.5 11.5 82 104-194 18-100 (121)
428 1z41_A YQJM, probable NADH-dep 89.7 5.3 0.00018 36.4 13.2 87 50-136 196-306 (338)
429 1s2w_A Phosphoenolpyruvate pho 89.6 2.2 7.4E-05 38.4 10.1 91 102-195 10-114 (295)
430 3kto_A Response regulator rece 89.5 0.89 3E-05 34.8 6.7 84 104-194 24-108 (136)
431 1m3u_A 3-methyl-2-oxobutanoate 89.5 3.7 0.00013 36.3 11.2 89 103-194 9-113 (264)
432 2ovl_A Putative racemase; stru 89.5 3.4 0.00012 38.1 11.8 108 80-199 154-276 (371)
433 1dz3_A Stage 0 sporulation pro 89.4 4.9 0.00017 30.0 10.9 82 106-194 22-105 (130)
434 3ih1_A Methylisocitrate lyase; 89.4 2.8 9.7E-05 37.8 10.7 93 102-197 20-126 (305)
435 3oa3_A Aldolase; structural ge 89.2 3.7 0.00013 36.7 11.2 118 79-199 79-212 (288)
436 1dos_A Aldolase class II; lyas 89.2 13 0.00046 34.2 16.1 147 54-201 92-294 (358)
437 3m5v_A DHDPS, dihydrodipicolin 89.1 2.1 7.3E-05 38.5 9.8 127 78-216 32-183 (301)
438 1zgz_A Torcad operon transcrip 89.1 5.3 0.00018 29.3 11.0 81 104-194 20-101 (122)
439 3vkj_A Isopentenyl-diphosphate 89.1 3.6 0.00012 38.2 11.5 86 51-136 175-295 (368)
440 2rdx_A Mandelate racemase/muco 88.9 6.4 0.00022 36.4 13.3 105 80-199 153-271 (379)
441 2nql_A AGR_PAT_674P, isomerase 88.9 2.9 0.0001 38.9 11.0 105 81-197 173-291 (388)
442 2fli_A Ribulose-phosphate 3-ep 88.9 1.1 3.9E-05 37.9 7.5 72 121-197 20-93 (220)
443 1xhf_A DYE resistance, aerobic 88.8 5.5 0.00019 29.2 10.9 81 104-194 21-102 (123)
444 1p4c_A L(+)-mandelate dehydrog 88.8 1.4 4.7E-05 41.2 8.5 82 52-136 214-306 (380)
445 3lte_A Response regulator; str 88.8 5.8 0.0002 29.5 11.0 84 103-194 23-107 (132)
446 3ks6_A Glycerophosphoryl diest 88.7 1.5 5.1E-05 38.2 8.3 56 81-136 175-231 (250)
447 3s5o_A 4-hydroxy-2-oxoglutarat 88.7 2.1 7.2E-05 38.6 9.5 135 78-223 39-198 (307)
448 3l21_A DHDPS, dihydrodipicolin 88.7 2 6.7E-05 38.8 9.3 125 78-215 40-188 (304)
449 3b2n_A Uncharacterized protein 88.7 3.5 0.00012 31.1 9.7 76 111-194 29-105 (133)
450 3flu_A DHDPS, dihydrodipicolin 88.5 2.5 8.5E-05 38.0 9.8 133 78-223 32-188 (297)
451 3gk0_A PNP synthase, pyridoxin 88.5 6.7 0.00023 34.6 12.0 173 22-199 52-247 (278)
452 1mb3_A Cell division response 88.5 4.5 0.00015 29.7 10.0 84 104-194 19-103 (124)
453 1ub3_A Aldolase protein; schif 88.5 1.5 5E-05 37.8 7.8 76 121-199 75-157 (220)
454 2a9o_A Response regulator; ess 88.4 5.7 0.0002 28.9 10.9 81 104-194 19-100 (120)
455 2wqp_A Polysialic acid capsule 88.4 2.2 7.4E-05 39.4 9.3 74 101-186 95-168 (349)
456 4eiv_A Deoxyribose-phosphate a 88.3 0.63 2.2E-05 41.7 5.5 114 80-199 106-262 (297)
457 3daq_A DHDPS, dihydrodipicolin 88.3 2.6 8.8E-05 37.8 9.7 127 78-217 27-177 (292)
458 1u83_A Phosphosulfolactate syn 88.2 1 3.4E-05 40.0 6.7 93 47-142 79-197 (276)
459 1rvk_A Isomerase/lactonizing e 88.2 7.6 0.00026 35.9 13.3 106 80-197 157-284 (382)
460 3cfy_A Putative LUXO repressor 88.2 4.1 0.00014 31.0 9.8 80 106-194 24-104 (137)
461 1i3c_A Response regulator RCP1 88.2 7 0.00024 30.0 11.3 83 106-194 28-119 (149)
462 1yad_A Regulatory protein TENI 88.1 4.4 0.00015 34.3 10.8 99 80-198 35-140 (221)
463 2tps_A Protein (thiamin phosph 88.1 1.5 5E-05 37.3 7.7 101 78-198 35-146 (227)
464 3ilh_A Two component response 88.1 7.1 0.00024 29.5 12.0 85 104-194 27-121 (146)
465 3tak_A DHDPS, dihydrodipicolin 88.0 2.1 7.2E-05 38.3 9.0 126 78-216 26-175 (291)
466 1ujp_A Tryptophan synthase alp 87.9 5.9 0.0002 35.0 11.7 120 9-136 90-228 (271)
467 1a04_A Nitrate/nitrite respons 87.9 4 0.00014 33.8 10.2 77 110-194 30-107 (215)
468 2nwr_A 2-dehydro-3-deoxyphosph 87.9 14 0.00047 32.6 14.3 174 11-198 4-225 (267)
469 3cpr_A Dihydrodipicolinate syn 87.8 3.8 0.00013 36.9 10.6 125 78-215 41-189 (304)
470 1vli_A Spore coat polysacchari 87.8 2.1 7.3E-05 39.9 9.0 89 101-201 105-199 (385)
471 3fkr_A L-2-keto-3-deoxyarabona 87.8 1.8 6.2E-05 39.2 8.4 105 78-185 33-161 (309)
472 3qze_A DHDPS, dihydrodipicolin 87.8 2.3 7.8E-05 38.6 9.1 127 78-217 48-198 (314)
473 3h5i_A Response regulator/sens 87.8 1.9 6.4E-05 33.1 7.5 83 103-194 22-106 (140)
474 1f6k_A N-acetylneuraminate lya 87.7 3.5 0.00012 36.9 10.2 126 78-216 28-178 (293)
475 2qvg_A Two component response 87.7 3.2 0.00011 31.6 8.9 85 104-194 25-117 (143)
476 2qzj_A Two-component response 87.7 4.9 0.00017 30.5 9.9 81 104-194 22-103 (136)
477 3kyj_B CHEY6 protein, putative 87.6 1.9 6.6E-05 33.1 7.6 80 106-194 33-117 (145)
478 3l12_A Putative glycerophospho 87.5 1.6 5.5E-05 39.4 7.9 56 81-136 239-295 (313)
479 1p6q_A CHEY2; chemotaxis, sign 87.5 4.1 0.00014 30.3 9.2 84 104-193 24-108 (129)
480 1zh2_A KDP operon transcriptio 87.5 4.5 0.00015 29.5 9.3 81 104-194 19-100 (121)
481 3m6m_D Sensory/regulatory prot 87.4 8.1 0.00028 29.5 11.4 83 105-194 33-118 (143)
482 2vws_A YFAU, 2-keto-3-deoxy su 87.3 14 0.00049 32.3 17.1 170 21-198 25-240 (267)
483 2o55_A Putative glycerophospho 87.2 2.4 8.2E-05 37.0 8.7 58 79-136 181-243 (258)
484 2yxg_A DHDPS, dihydrodipicolin 87.2 5.1 0.00017 35.7 11.0 103 78-185 25-151 (289)
485 1ea0_A Glutamate synthase [NAD 87.1 4.6 0.00016 44.0 12.1 91 46-136 975-1092(1479)
486 2ehh_A DHDPS, dihydrodipicolin 87.1 4.3 0.00015 36.3 10.5 126 78-216 25-175 (294)
487 2qgy_A Enolase from the enviro 87.1 6.2 0.00021 36.7 11.9 106 80-197 157-277 (391)
488 3qfe_A Putative dihydrodipicol 87.1 2.1 7.1E-05 38.9 8.4 135 78-223 36-197 (318)
489 2gkg_A Response regulator homo 87.0 3.5 0.00012 30.3 8.5 85 103-194 22-107 (127)
490 3l5l_A Xenobiotic reductase A; 87.0 2.3 7.9E-05 39.4 8.8 86 51-136 211-324 (363)
491 1s8n_A Putative antiterminator 87.0 3.5 0.00012 33.9 9.3 82 104-194 31-113 (205)
492 3snk_A Response regulator CHEY 86.9 1.3 4.5E-05 33.7 6.1 82 104-194 32-115 (135)
493 3kxq_A Triosephosphate isomera 86.9 3.6 0.00012 36.5 9.5 120 79-200 104-261 (275)
494 3na8_A Putative dihydrodipicol 86.9 1.9 6.6E-05 39.1 8.1 127 77-216 48-199 (315)
495 2wkj_A N-acetylneuraminate lya 86.9 5.7 0.00019 35.7 11.2 126 78-216 36-186 (303)
496 3jr2_A Hexulose-6-phosphate sy 86.9 7.7 0.00026 32.8 11.6 100 85-194 29-138 (218)
497 3ozy_A Putative mandelate race 86.8 6.6 0.00023 36.5 12.0 106 80-197 159-279 (389)
498 2og9_A Mandelate racemase/muco 86.8 4.6 0.00016 37.6 10.9 104 80-195 170-288 (393)
499 3dz1_A Dihydrodipicolinate syn 86.7 2.8 9.4E-05 38.0 9.0 104 78-185 33-159 (313)
500 1o5k_A DHDPS, dihydrodipicolin 86.6 3.1 0.0001 37.5 9.2 120 78-210 37-181 (306)
No 1
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=100.00 E-value=5.8e-52 Score=388.69 Aligned_cols=300 Identities=35% Similarity=0.552 Sum_probs=259.9
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCC-CHHHHH
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFP-HNENIK 81 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~-~~~~~~ 81 (332)
|+++|+++|||||+||+ |+++++++.+++++|++|++... +.+++.+++.++++++.++.||+||+++..+ ..+.++
T Consensus 19 ~~~~l~~~~Pii~apM~-gvs~~~la~av~~aGglG~i~~~-~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~ 96 (326)
T 3bo9_A 19 VTDLLEIEHPILMGGMA-WAGTPTLAAAVSEAGGLGIIGSG-AMKPDDLRKAISELRQKTDKPFGVNIILVSPWADDLVK 96 (326)
T ss_dssp HHHHHTCSSSEEECCCT-TTSCHHHHHHHHHTTSBEEEECT-TCCHHHHHHHHHHHHTTCSSCEEEEEETTSTTHHHHHH
T ss_pred hHHhcCCCCCEEECCCC-CCCCHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEEeccCCCHHHHHH
Confidence 67899999999999998 79999999999999999999874 6799999999999999888999999998544 357788
Q ss_pred HHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHH
Q 020013 82 AILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDL 161 (332)
Q Consensus 82 ~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~ 161 (332)
.+.+.++++|++++++ |.++++.+++.|+++++.+++.++++.+.+.|+|+|+++|.++|||. +...++.+++++++.
T Consensus 97 ~~~~~g~d~V~l~~g~-p~~~~~~l~~~g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~-G~~~~~~ll~~i~~~ 174 (326)
T 3bo9_A 97 VCIEEKVPVVTFGAGN-PTKYIRELKENGTKVIPVVASDSLARMVERAGADAVIAEGMESGGHI-GEVTTFVLVNKVSRS 174 (326)
T ss_dssp HHHHTTCSEEEEESSC-CHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEEC-CSSCHHHHHHHHHHH
T ss_pred HHHHCCCCEEEECCCC-cHHHHHHHHHcCCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCCccC-CCccHHHHHHHHHHH
Confidence 8999999999999886 68899999999999999999999999999999999999999999997 556789999999988
Q ss_pred hCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHHHhcCCCceEEEEecccCCCCCCceeecC
Q 020013 162 IGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQT 241 (332)
Q Consensus 162 ~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~R~l~n 241 (332)
+ ++|||++|||.+++|+.+++++||+||++||+|+.++||..++.||++++++.++++....+ .+|+|.|+|+|
T Consensus 175 ~---~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e~~~~~~~k~~~~~~~~~~~~~~~~---~~G~p~R~l~n 248 (326)
T 3bo9_A 175 V---NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVESDVHPVYKEKIVKASIRDTVVTGA---KLGHPARVLRT 248 (326)
T ss_dssp C---SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSSCCSCHHHHHHHHHCCTTCEEEECT---TTTCCEEEECC
T ss_pred c---CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCccccccHHHHHHHHhcccccEEEecc---cCCCceEEEec
Confidence 7 79999999999999999999999999999999999999999999999999987776554444 35999999999
Q ss_pred hHHHhhhcCCCCCccCCCcccccccccchHHHHHHhhCCCCcccccCCccceeeeccccccccCCCCCHHHHHHHHHHHH
Q 020013 242 PFFSNWKNIPAHENEVNQPIIGRSTIHGIEKKIHRLAGTVPNVTTTGDIDSMVMFAGEGVGLIREILPAGEVVKQLVEGA 321 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~~~~~aG~~~~~i~~i~~~~~iv~~l~~e~ 321 (332)
+|+++|.+... ..++. ++++. .+.++++..+||.|.+.+|+||++++++++.|++|||++|++|+
T Consensus 249 ~~~~~~~~~~~----~~~~~-----~~~~~------~~~~~~~~~~g~~~~~~~~aGq~~~~i~~i~~~~eiv~~l~~e~ 313 (326)
T 3bo9_A 249 PFARKIQEMEF----ENPMQ-----AEEML------VGSLRRAVVEGDLERGSFMVGQSAGLIDEIKPVKQIIEDILKEF 313 (326)
T ss_dssp HHHHHHHHHHH----HCHHH-----HHHHH------TTHHHHHHTTCCTTTCCCBCCGGGGGCCSCBCHHHHHHHHHHHH
T ss_pred HHHHHhhhccC----CCHHH-----HHHHc------cchHHHHHHcCCcccceEEcccChhhcCCCCcHHHHHHHHHHHH
Confidence 99999875311 01111 11111 01122355789999999999999999999999999999999999
Q ss_pred HHHHHh
Q 020013 322 QLLVHT 327 (332)
Q Consensus 322 ~~~~~~ 327 (332)
.+++.+
T Consensus 314 ~~~~~~ 319 (326)
T 3bo9_A 314 KETVEK 319 (326)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998765
No 2
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=100.00 E-value=5.1e-51 Score=383.05 Aligned_cols=304 Identities=33% Similarity=0.428 Sum_probs=257.8
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecC----CC-CH
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLA----FP-HN 77 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~----~~-~~ 77 (332)
|+++|+++|||||+||. |+++++++.+++++|++|++....+.+++.+++.++++++.++.||++|++++ .+ ..
T Consensus 8 ~~~~l~~~~Pii~apM~-gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~ 86 (328)
T 2gjl_A 8 FTETFGVEHPIMQGGMQ-WVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYA 86 (328)
T ss_dssp HHHHHTCSSSEEECCCT-TTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHH
T ss_pred HHHHhCCCCCEEECCCC-CCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHH
Confidence 78899999999999998 79999999999999999999875555699999999999998889999999997 33 35
Q ss_pred HHHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCC-CCchhhhHH
Q 020013 78 ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIG-QDGLISLLP 156 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~-~~~~~~ll~ 156 (332)
+.++.+.+.++++|++++++ |.++++.+++.|++++..+++.++++.+++.|+|+|+++|.++|||.+. ....+.+++
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~-p~~~~~~l~~~gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~ 165 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGND-PGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLP 165 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESC-CHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHH
T ss_pred HHHHHHHhcCCCEEEEcCCC-cHHHHHHHHHcCCCEEeeCCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHH
Confidence 78899999999999999886 6789999999999999999999999999999999999999999999622 236789999
Q ss_pred HHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHHHhcCCCceEEEEecccCCCCCCc
Q 020013 157 MVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPH 236 (332)
Q Consensus 157 ~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~ 236 (332)
++++.+ ++||+++|||.+++++.+++++|||+|++||+|+.+.||..++.||++++++.++++..... ..|.|.
T Consensus 166 ~v~~~~---~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e~~~~~~~k~~~~~~~~~~~~~~~~---~~g~~~ 239 (328)
T 2gjl_A 166 AAANRL---RVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMR---SLRNTA 239 (328)
T ss_dssp HHHTTC---CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSSSCSCHHHHHHHHHCCTTCEEEECG---GGTCCE
T ss_pred HHHHhc---CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCccccccHHHHHHHHhcccccEEEeec---cCCCce
Confidence 998876 79999999999999999999999999999999999999999999999999986666443333 248999
Q ss_pred eeecChHHHhhhcCCCCCccCCCcccccccccch-HHHHHHhhCCCCcccccCCccceeeeccccccccCCCCCHHHHHH
Q 020013 237 RVLQTPFFSNWKNIPAHENEVNQPIIGRSTIHGI-EKKIHRLAGTVPNVTTTGDIDSMVMFAGEGVGLIREILPAGEVVK 315 (332)
Q Consensus 237 R~l~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gd~~~~~~~aG~~~~~i~~i~~~~~iv~ 315 (332)
|+++|+|+++|.+.+..... .++.+ ++.. ...++ .+..+||.|.+.+|+||++++++++.|++|||+
T Consensus 240 r~~~n~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~-------~a~~~g~~~~~~~~aG~~~~~~~~~~~~~ei~~ 307 (328)
T 2gjl_A 240 RVARNAISQEVLAIEARGGA-GYADI----AALVSGQRGR-------QVYQQGDTDLGIWSAGMVQGLIDDEPACAELLR 307 (328)
T ss_dssp EEECSHHHHHHHHHHHTSCC-CGGGT----HHHHCHHHHH-------HHHHHCCTTSSCCBCCGGGGGCCCCCCHHHHHH
T ss_pred EEEcCHHHHHHHhhhhccCC-ChHHH----HHHHhhHHHH-------HHHHcCCccceEEEcccchhhcCCCCCHHHHHH
Confidence 99999999999754322110 12211 1101 11222 245689999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 020013 316 QLVEGAQLLVH 326 (332)
Q Consensus 316 ~l~~e~~~~~~ 326 (332)
+|++|+.+++.
T Consensus 308 ~l~~e~~~~~~ 318 (328)
T 2gjl_A 308 DIVEQARQLVR 318 (328)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999887
No 3
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=100.00 E-value=1.5e-50 Score=380.39 Aligned_cols=305 Identities=31% Similarity=0.519 Sum_probs=260.3
Q ss_pred cchhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCC-HHHH
Q 020013 2 GWRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH-NENI 80 (332)
Q Consensus 2 ~~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~-~~~~ 80 (332)
.|+++|+++||||++||. |+++++++.+++++|++|++..+ +.+++.+++.++++++.++.||+||+++..+. .+.+
T Consensus 4 ~~~~~l~~~~Pii~apM~-g~s~~~la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~ 81 (332)
T 2z6i_A 4 RITELLKIDYPIFQGGMA-WVADGDLAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIV 81 (332)
T ss_dssp HHHHHHTCSSSEEECCCT-TTCCHHHHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHH
T ss_pred hhhHHhCCCCCEEeCCCC-CCCcHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHH
Confidence 378999999999999998 79999999999999999999875 67999999999999998889999999985443 5678
Q ss_pred HHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHH
Q 020013 81 KAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVD 160 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~ 160 (332)
+.+.+.++|+|++++|. |.++++.+++.|++++..+.++++++.+.+.|+|+|+++|.++|||. +...++.+++++++
T Consensus 82 ~~a~~~g~d~V~~~~g~-p~~~i~~l~~~g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~~GG~~-g~~~~~~ll~~i~~ 159 (332)
T 2z6i_A 82 DLVIEEGVKVVTTGAGN-PSKYMERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHI-GKLTTMTLVRQVAT 159 (332)
T ss_dssp HHHHHTTCSEEEECSSC-GGGTHHHHHHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEEC-CSSCHHHHHHHHHH
T ss_pred HHHHHCCCCEEEECCCC-hHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEEECCCCCCCC-CCccHHHHHHHHHH
Confidence 88999999999999875 67889999999999999999999999999999999999999999997 45577899999998
Q ss_pred HhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHHHhcCCCceEEEEecccCCCCCCceeec
Q 020013 161 LIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQ 240 (332)
Q Consensus 161 ~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~R~l~ 240 (332)
.+ ++|||++|||.+++++.+++++|||+|+|||+|+.++|+..++.||+++++++++++..... ..|+|.|+++
T Consensus 160 ~~---~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~~~~~~~k~~~~~~~~~d~~~~~~---~~g~~~r~l~ 233 (332)
T 2z6i_A 160 AI---SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKILKARDIDTTISAQ---HFGHAVRAIK 233 (332)
T ss_dssp HC---SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTCCSCHHHHHHHHHCCTTCEEEESG---GGTCCEEEEC
T ss_pred hc---CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCccccccHHHHHHHHhCCCcCEEEECC---cCCCcEEEEe
Confidence 87 79999999999999999999999999999999999999999999999999987666443322 3589999999
Q ss_pred ChHHHhhhcCC-----CCCccCCCcccccccccchHHHHHHhhCCCCcccccCCccceeeeccccccccCCCCCHHHHHH
Q 020013 241 TPFFSNWKNIP-----AHENEVNQPIIGRSTIHGIEKKIHRLAGTVPNVTTTGDIDSMVMFAGEGVGLIREILPAGEVVK 315 (332)
Q Consensus 241 n~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~~~~~aG~~~~~i~~i~~~~~iv~ 315 (332)
|+|+++|.+.+ ... ..++. ++++. ...++.+..+||.|.+.+|+||++++++++.|++||++
T Consensus 234 n~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~------~~~~~~a~~~g~~~~~~~~aG~~~~~~~~~~~~~ei~~ 300 (332)
T 2z6i_A 234 NQLTRDFELAEKDAFKQED--PDLEI-----FEQMG------AGALAKAVVHGDVDGGSVMAGQIAGLVSKEETAEEILK 300 (332)
T ss_dssp SHHHHHHHHHHHHHHTC-----CCHH-----HHHHH------TTHHHHHHTTCCTTTSCCBCCGGGGGCCCCBCHHHHHH
T ss_pred CHHHHHHHhhccccccccC--CCHHH-----HHHHc------cchHHHHHHcCCcccceEecCcChhhcCCCCCHHHHHH
Confidence 99999987543 110 01111 11111 01112355789999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 020013 316 QLVEGAQLLVHTKF 329 (332)
Q Consensus 316 ~l~~e~~~~~~~~~ 329 (332)
+|++|+.+++.+++
T Consensus 301 ~l~~e~~~~~~~~~ 314 (332)
T 2z6i_A 301 DLYYGAAKKIQEEA 314 (332)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988754
No 4
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=100.00 E-value=7.2e-49 Score=373.98 Aligned_cols=301 Identities=34% Similarity=0.518 Sum_probs=255.0
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCC-------
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFP------- 75 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~------- 75 (332)
|+++| +|||||+||++|+++++|+++|+++||+|++.. ++.+++.+++.++++++.++.||+||++++.+
T Consensus 5 ~~~~~--~~Pii~apMaggvs~~~la~av~~aGglG~i~~-~~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~ 81 (369)
T 3bw2_A 5 LTDLF--PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAA-GYKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGA 81 (369)
T ss_dssp TTTSS--SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEEC-TTSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CH
T ss_pred hhhhC--cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCC-CCCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHH
Confidence 56777 899999999856999999999999999999987 47899999999999999988999999998654
Q ss_pred -----------------------------CHHHHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEecCCHHHHHHH
Q 020013 76 -----------------------------HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKA 126 (332)
Q Consensus 76 -----------------------------~~~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v~s~~~a~~a 126 (332)
.++.++.+.+.++++|++++|.++.++++.+++.|++++..++++++++.+
T Consensus 82 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~~g~~v~~~v~t~~~a~~a 161 (369)
T 3bw2_A 82 VEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPDREVIARLRRAGTLTLVTATTPEEARAV 161 (369)
T ss_dssp HHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCCHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHHCCCeEEEECCCHHHHHHH
Confidence 145678888999999999998877889999999999999999999999999
Q ss_pred HHcCCCEEEEecCCCCcccCCC----------CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecc
Q 020013 127 VNAGVDAIIVQGREAGGHVIGQ----------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 196 (332)
Q Consensus 127 ~~~g~D~ivv~G~eaGGh~~~~----------~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT 196 (332)
++.|+|+|+++|+++|||.+.. ...+.+++++++.+ ++|||++|||.+++++.+++++|||+|+|||
T Consensus 162 ~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~---~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs 238 (369)
T 3bw2_A 162 EAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV---DIPVVAAGGIMRGGQIAAVLAAGADAAQLGT 238 (369)
T ss_dssp HHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC---SSCEEEESSCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc---CceEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 9999999999999999996321 23488899998876 7999999999999999999999999999999
Q ss_pred ccccCccCCCCHHHHHHHhcCCCceEEEEecccCCCCCCceeecChHHHhhhcCCCCCccCCCcccccccccchHHHHHH
Q 020013 197 RFVASEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWKNIPAHENEVNQPIIGRSTIHGIEKKIHR 276 (332)
Q Consensus 197 ~fl~t~Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (332)
+|+.++|+..++.||+.++++..+++.... ...|+|.|+++|+|+++|...+. ..+|. ++.+...+++
T Consensus 239 ~~~~~~e~~~~~~~k~~i~~~~~~~~~~~~---~~~g~~~r~~~n~~~~~~~~~~~----~~~~~-----~~~~~~~~~~ 306 (369)
T 3bw2_A 239 AFLATDESGAPGPHKRALTDPLFARTRLTR---AFTGRPARSLVNRFLREHGPYAP----AAYPD-----VHHLTSPLRK 306 (369)
T ss_dssp HHHTSTTCCCCHHHHHHTTCGGGCCEEEES---TTTSSCEEEECCHHHHHHGGGCC----SCTTH-----HHHHHHHHHH
T ss_pred HHhCCcccCccHHHHHHHHhCcCCCEEEEe---ccCCCcEEEEeCHHHHHhhccCC----CChHH-----HHHHHHHHHH
Confidence 999999999999999999998644322211 23589999999999999875432 12332 2223334433
Q ss_pred hhCCCCcccccCCccceeeeccccccccCCCCCHHHHHHHHHHHHHHHHHhh
Q 020013 277 LAGTVPNVTTTGDIDSMVMFAGEGVGLIREILPAGEVVKQLVEGAQLLVHTK 328 (332)
Q Consensus 277 ~~~~~~~~~~~gd~~~~~~~aG~~~~~i~~i~~~~~iv~~l~~e~~~~~~~~ 328 (332)
. +...||.|++.+|+||+++++++ .|++|||++|++|+++++.+.
T Consensus 307 ~------~~~~g~~~~~~~~aGq~~~~~~~-~~~~eiv~~l~~e~~~~~~~~ 351 (369)
T 3bw2_A 307 A------AAKAGDAQGMALWAGQGHRMARE-LPAGRLVEVLAAELAEARTAL 351 (369)
T ss_dssp H------HHHHTCGGGSCCBCCTTGGGCCC-SCHHHHHHHHHHHHHHHHHHT
T ss_pred H------HHhcCChhhEeEEcccccCcCCC-CcHHHHHHHHHHHHHHHHHHH
Confidence 2 34679999999999999999998 899999999999999988664
No 5
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=100.00 E-value=1.3e-41 Score=375.03 Aligned_cols=303 Identities=19% Similarity=0.196 Sum_probs=239.3
Q ss_pred cchhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhc--CCcEEEEeecCCCC---
Q 020013 2 GWRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--- 76 (332)
Q Consensus 2 ~~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~--~~p~gvnl~~~~~~--- 76 (332)
.|++++| ++|||||||++++++++||+||+++||+|+|...++.+++.+++.++++|+.+ ++||++|+++..+.
T Consensus 575 ~~t~~lg-~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~~~~~~~p~gvN~~~~~p~~~~ 653 (2060)
T 2uva_G 575 KMSRLLG-VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEKAIPPGRGITVNLIYVNPRAMG 653 (2060)
T ss_dssp HHHHHHT-SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGGGSCTTCCEEEEEETTCTTHHH
T ss_pred hhhhccc-cceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHhhcccCCCeEecccccCcccch
Confidence 3678999 99999999987799999999999999999993335789999999999999988 69999999987664
Q ss_pred --HHHHHHHHhcCCcE--EEEccCCCcH-HHHHHHHhCCCEEEEecCCHHHHHHH----HHcCCCEEE---EecCCCCcc
Q 020013 77 --NENIKAILSEKVAV--LQVSWGEYSE-ELVLEAHSAGVKVVPQVGSFDEARKA----VNAGVDAII---VQGREAGGH 144 (332)
Q Consensus 77 --~~~~~~~~~~~~~~--I~~~~g~~~~-~~i~~~~~~g~~v~~~v~s~~~a~~a----~~~g~D~iv---v~G~eaGGh 144 (332)
.+.++.+.+.++++ |.+++|.+.. +.++.+++.|+++++.+++.++++++ .++|+|+|| ++|.++|||
T Consensus 654 ~~~~~~~~~~~~gv~i~gv~~~~G~p~~e~~~~~l~~~gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH 733 (2060)
T 2uva_G 654 WQIPLLGRLRADGVPIEGLTIGAGVPSIEVANEYIQTLGIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGH 733 (2060)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEESSCCCHHHHHHHHHHSCCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSS
T ss_pred hHHHHHHHHHHcCCCcceEeecCCCCCHHHHHHHHHHcCCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCC
Confidence 25678899999999 9999998654 58889999999999999999988877 899999999 999999999
Q ss_pred cCCC---CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHH-----------HcCcceeeeccccccCccCCCCHHH
Q 020013 145 VIGQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL-----------SLGAQGICLGTRFVASEESYAHPEY 210 (332)
Q Consensus 145 ~~~~---~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al-----------~~GA~gV~~GT~fl~t~Es~~~~~~ 210 (332)
.+.. .+++.+++++++.+ ++|||++|||+|+++++++| ++|||||+|||+|+.|+||++|+.|
T Consensus 734 ~g~~d~~~~~l~lv~~i~~~~---~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea~~s~~~ 810 (2060)
T 2uva_G 734 HSFEDFHQPILLMYSRIRKCS---NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEAHTSKQA 810 (2060)
T ss_dssp CCSCCSHHHHHHHHHHHHTST---TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTSCCCHHH
T ss_pred CCcccccchHHHHHHHHHHHc---CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCCCCCHHH
Confidence 7322 35688999999987 79999999999999999999 9999999999999999999999999
Q ss_pred HHHHhcCCCceE-------------EEEecccCCCCCCceeecChHHHhhhcCCCCCccCCCcccccccccchHHHHHHh
Q 020013 211 KRKLVEMDKTEY-------------TDVFGRARWPGAPHRVLQTPFFSNWKNIPAHENEVNQPIIGRSTIHGIEKKIHRL 277 (332)
Q Consensus 211 k~~~~~~~~t~~-------------t~~~~~~~~~g~~~R~l~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (332)
|++|++++++++ ...+ +...|+|.|+|+|+|++.|.+++.... .+|. ....+++.. +++.
T Consensus 811 K~~lv~a~~~dt~~w~~~~~~~~ggv~t~--~s~~G~p~R~l~n~~~~~~~~~~~~~~--~~~~--~~~~~~l~~-~~~~ 883 (2060)
T 2uva_G 811 KQAIVDAPGVDDDQWENTYKRPTGGVITV--LSEMGEPIHKLATRGVLFWKELDDKIF--SLDR--SKRVAELKK-RRDY 883 (2060)
T ss_dssp HHHHHTSCCCCSTTSGGGGTSCCTTEEEE--ECSSSCEEEEECCHHHHHHHHHHHHTT--TSCH--HHHHHHHHH-SHHH
T ss_pred HHHHHhCCcccccchhccccCCCceEEEe--cccCCCCeEEEeCHHHHHHHhhhhccc--CCCh--HHHHHHHHH-HHHH
Confidence 999999876553 2221 123599999999999999975432111 1110 001111111 2211
Q ss_pred hCCCCcccccCCcccee---eeccccccccCCCCCHHHHHHHHHHHH
Q 020013 278 AGTVPNVTTTGDIDSMV---MFAGEGVGLIREILPAGEVVKQLVEGA 321 (332)
Q Consensus 278 ~~~~~~~~~~gd~~~~~---~~aG~~~~~i~~i~~~~~iv~~l~~e~ 321 (332)
. ....+||.+.+. +++|+++++ +++|++||+++|++++
T Consensus 884 ~----~~~~~~d~~~~~~G~~~~G~~~~~--~~~~~~eiv~~l~~~~ 924 (2060)
T 2uva_G 884 I----IKKLNDDFQKVWFGRNSAGEPVDL--EDMTYAEVVHRMVELM 924 (2060)
T ss_dssp H----HHHHHHHSSSEETTBCTTSCBCCG--GGCBHHHHHHHHHHHH
T ss_pred H----HHhcCCchhhhhhheeecccccCC--CCCcHHHHHHHHHHHh
Confidence 0 000133433332 345666676 6899999999999886
No 6
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=100.00 E-value=7.5e-40 Score=358.83 Aligned_cols=245 Identities=19% Similarity=0.227 Sum_probs=203.5
Q ss_pred cchhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcC--CcEEEEeecCCCC---
Q 020013 2 GWRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTE--RPFGVGVVLAFPH--- 76 (332)
Q Consensus 2 ~~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~--~p~gvnl~~~~~~--- 76 (332)
.|+++|| +||||||||++++++++||+|||||||+|+|..+++.++|.+++.|+++|++++ +|||||+++..+.
T Consensus 582 ~~t~llg-~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~t~~~~~~gvN~~~~~~~~~~ 660 (2051)
T 2uv8_G 582 KFSKLIG-RPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIEKGSTFGINLIYVNPFMLQ 660 (2051)
T ss_dssp HHHHHHS-SCSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTCTTHHH
T ss_pred HHHHhhC-ccceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHhcCCCCceEEEEeecChhhhh
Confidence 3789999 699999999866679999999999999999965567899999999999999875 7999999887553
Q ss_pred --HHHHHHHHhcCCcE--EEEccCCCc-HHHHHHHHhCCCEEEEecCC----HHHHHHHHHcCCCE---EEEecCCCCcc
Q 020013 77 --NENIKAILSEKVAV--LQVSWGEYS-EELVLEAHSAGVKVVPQVGS----FDEARKAVNAGVDA---IIVQGREAGGH 144 (332)
Q Consensus 77 --~~~~~~~~~~~~~~--I~~~~g~~~-~~~i~~~~~~g~~v~~~v~s----~~~a~~a~~~g~D~---ivv~G~eaGGh 144 (332)
.+.++.++++|+++ |.+++|.|. +..++.+...|+++++.+.+ .++++.+.++|+|+ ++++|.|+|||
T Consensus 661 ~~~~~~~~~~~~gv~i~~v~~~ag~p~~~~~~~~i~~lG~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH 740 (2051)
T 2uv8_G 661 WGIPLIKELRSKGYPIQFLTIGAGVPSLEVASEYIETLGLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGH 740 (2051)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEESSCCCHHHHHHHHHHSCCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEE
T ss_pred hhHHHHHHHHHcCCCcceEEecCCCCchhhHHHHHHHcCCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCC
Confidence 25678889999999 999888765 34445566669999986653 34456777889999 36689999999
Q ss_pred cCCC---CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHH-----------HcCcceeeeccccccCccCCCCHHH
Q 020013 145 VIGQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL-----------SLGAQGICLGTRFVASEESYAHPEY 210 (332)
Q Consensus 145 ~~~~---~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al-----------~~GA~gV~~GT~fl~t~Es~~~~~~ 210 (332)
.+.. ..++.++|++++.+ +||||++|||+|+++++++| ++|||||+||||||+|+||++|++|
T Consensus 741 ~g~~d~~~~~l~l~~~v~~~~---~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea~~~~~~ 817 (2051)
T 2uv8_G 741 HSFEDAHTPMLQMYSKIRRHP---NIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEVKTSPDA 817 (2051)
T ss_dssp CCSCCSSHHHHHHHHHHTTCT---TBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTSCCCHHH
T ss_pred CCcccccccHHHHHHHHHhcC---CceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCcccccCHHH
Confidence 7322 34577899999987 89999999999999999999 8999999999999999999999999
Q ss_pred HHHHhcCCCceE-------------EEEecccCCCCCCceeecChHHHhhhcCCC
Q 020013 211 KRKLVEMDKTEY-------------TDVFGRARWPGAPHRVLQTPFFSNWKNIPA 252 (332)
Q Consensus 211 k~~~~~~~~t~~-------------t~~~~~~~~~g~~~R~l~n~~~~~~~~~~~ 252 (332)
||+|+++++++. ..... +-.|.|.|.|+|++++.|.+++.
T Consensus 818 K~~iv~a~~~d~~~w~~~~~~~~gG~~~~~--s~~g~~~r~l~~~~~~~~~~~~~ 870 (2051)
T 2uv8_G 818 KKCIAACTGVPDDKWEQTYKKPTGGIVTVR--SEMGEPIHKIATRGVMLWKEFDE 870 (2051)
T ss_dssp HHHHHTCCCCCGGGGGGGGTSCCSSEEEEE--CTTSCEEEEECCHHHHHHHHHHH
T ss_pred HHHHHhCCCCcccchhhccccCcCcEEEEe--ccCCCcHHHhccHHHHHHHHhHh
Confidence 999999876553 21111 11388999999999999987754
No 7
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=100.00 E-value=1.1e-35 Score=335.69 Aligned_cols=239 Identities=23% Similarity=0.288 Sum_probs=202.2
Q ss_pred cchhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhc--CCcEEEEeecCCCCH--
Q 020013 2 GWRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPHN-- 77 (332)
Q Consensus 2 ~~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~--~~p~gvnl~~~~~~~-- 77 (332)
.|+++|| +|||||+||++++++++||+||||+||+|+|..+++.+++.+++.|+++|+++ ++||+||+++..+..
T Consensus 420 ~~~~~lg-~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~~~~~~~p~~vNl~~~~p~~~~ 498 (3089)
T 3zen_D 420 KFTRLTG-RSPILLAGMTPTTVDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIAELETLLEPGRAIQFNTLFLDPYLWK 498 (3089)
T ss_dssp HHHHHHS-SCSEEECCCHHHHTSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHHHSCTTCCCEEEEECSCHHHHH
T ss_pred hhhhhcC-CCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHHhcCCCCceeechhhcChhhhh
Confidence 3789999 99999999986678999999999999999997666779999999999999987 689999999876533
Q ss_pred ------HHHHHHHhcC--CcEEEEccCCCc----HHHHHHHHhCCCEEEE-ecCCHHHHHHHHHcCCC------EEEEec
Q 020013 78 ------ENIKAILSEK--VAVLQVSWGEYS----EELVLEAHSAGVKVVP-QVGSFDEARKAVNAGVD------AIIVQG 138 (332)
Q Consensus 78 ------~~~~~~~~~~--~~~I~~~~g~~~----~~~i~~~~~~g~~v~~-~v~s~~~a~~a~~~g~D------~ivv~G 138 (332)
+.++.+.+++ +|.|.+++|.|+ .++++.+++.|++++. .++++++++++.+.++| +|+++|
T Consensus 499 ~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~ee~~~~i~~l~~~Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G 578 (3089)
T 3zen_D 499 LQVGGKRLVQRARQSGAPIDGLVVSAGIPDLEEAVDIIDELNEVGISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEG 578 (3089)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEESSCCCHHHHHHHHTSTTHHHHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECC
T ss_pred hccCHHHHHHHHHHcCCCceEEEEeCCCCchhHhHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeC
Confidence 6788899999 666888888765 5778888888999888 89999999999999988 999999
Q ss_pred CCCCcccCCCCchhhhHHHHHHHhCC-CCCcEEeecCcCCHHHHHHHH-----------HcCcceeeeccccccCccCCC
Q 020013 139 REAGGHVIGQDGLISLLPMVVDLIGD-RDIPIIAAGGIVDARGYVAAL-----------SLGAQGICLGTRFVASEESYA 206 (332)
Q Consensus 139 ~eaGGh~~~~~~~~~ll~~i~~~~~~-~~iPviaaGGI~~~~~v~~al-----------~~GA~gV~~GT~fl~t~Es~~ 206 (332)
.++|||. +...+..+++.....+.. .++|||++|||+|++++++++ .+|||||+|||+|+.|+||.+
T Consensus 579 ~eaGGH~-g~~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~Ea~~ 657 (3089)
T 3zen_D 579 GRAGGHH-SWEDLDDLLLATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLEATT 657 (3089)
T ss_dssp SSSSEEC-CSCCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTTSCB
T ss_pred CCcCCCC-CcccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCcccCC
Confidence 9999998 555677788444443321 379999999999999999999 999999999999999999999
Q ss_pred CHHHHHHHhcCCCce-----------EEEEecccCCCCCCceeecChHHH
Q 020013 207 HPEYKRKLVEMDKTE-----------YTDVFGRARWPGAPHRVLQTPFFS 245 (332)
Q Consensus 207 ~~~~k~~~~~~~~t~-----------~t~~~~~~~~~g~~~R~l~n~~~~ 245 (332)
++.||++|+++++++ +....+. .|.|.|.++|++++
T Consensus 658 s~~~K~~l~~a~~~~~~~~~g~~a~g~~~~~s~---~g~~~~~~~n~~~~ 704 (3089)
T 3zen_D 658 SPQVKQLLVETKGTEAWVGAGKAANGMASGRSQ---LGADIHEIDNAASR 704 (3089)
T ss_dssp CHHHHHHHHHCCCCSSCCCSSSCBTTEEEEECT---TSCEEEEETTTCCH
T ss_pred CHHHHHHHHhCCCcccccccCCccCCEEEeeec---cCCchHhhhhhhHH
Confidence 999999999987732 2333332 47889999886544
No 8
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.98 E-value=3.7e-31 Score=251.67 Aligned_cols=202 Identities=19% Similarity=0.275 Sum_probs=158.0
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcC----CcEE--EEeecC---
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTE----RPFG--VGVVLA--- 73 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~----~p~g--vnl~~~--- 73 (332)
|++.+++++||||+||. ++++++||+|||++||+|+|+. +.++|+++++++++|+.++ .||+ +||+..
T Consensus 35 lt~~l~l~~PIi~a~M~-~Vs~~~lA~Ava~aGGlGvi~~--~~~~e~~~~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~ 111 (400)
T 3ffs_A 35 LTKNVSLKIPLISSAMD-TVTEHLMAVGMARLGGIGIIHK--NMDMESQVNEVLKVKNWISNLEKNESTPDQNLDKESTD 111 (400)
T ss_dssp SSSSCEESSSEEECSCT-TTCSSHHHHHHHTTTCEEEECS--SSCHHHHHHHHHHHHCCC--------------------
T ss_pred hhcccCCCCCEEeCCCC-CcCcHHHHHHHHHCCCEEEeCC--CCCHHHHHHHHHHHHhhccCcccCCCCccccccCCCCC
Confidence 66889999999999998 8999999999999999999985 5799999999999998775 6888 787510
Q ss_pred -------------------------------CCCHHHHHHHHhcCCcEEEE--ccCCCc--HHHHHHHHhC-CCEEEE-e
Q 020013 74 -------------------------------FPHNENIKAILSEKVAVLQV--SWGEYS--EELVLEAHSA-GVKVVP-Q 116 (332)
Q Consensus 74 -------------------------------~~~~~~~~~~~~~~~~~I~~--~~g~~~--~~~i~~~~~~-g~~v~~-~ 116 (332)
..+.+.++.+++.|+|+|.+ ++|.+. .+.++.+++. +++|+. .
T Consensus 112 ~~~~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~ 191 (400)
T 3ffs_A 112 GKDTKSNNNIDAYSNENLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGN 191 (400)
T ss_dssp -----------CCTTCCBCTTSSBCCEEEECCC-CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHHHHHhhhCcchhhccccceeEEeecCCCHHHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEee
Confidence 00146788999999999987 556532 3566777775 899884 8
Q ss_pred cCCHHHHHHHHHcCCCEEEEecCCCCcccC-C------CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCc
Q 020013 117 VGSFDEARKAVNAGVDAIIVQGREAGGHVI-G------QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGA 189 (332)
Q Consensus 117 v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~-~------~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA 189 (332)
+.+.++++.++++|+|+|++ |.+.| |.. . ..+.+.+++++.+.++..++|||++|||.+++++.+++++||
T Consensus 192 V~t~e~A~~a~~aGAD~I~v-G~g~G-s~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGA 269 (400)
T 3ffs_A 192 VVTEEATKELIENGADGIKV-GIGPG-SICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGA 269 (400)
T ss_dssp ECSHHHHHHHHHTTCSEEEE-CC----------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTC
T ss_pred cCCHHHHHHHHHcCCCEEEE-eCCCC-cCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCC
Confidence 99999999999999999999 76544 421 1 135678888888876444799999999999999999999999
Q ss_pred ceeeeccccccCccCCCCHH
Q 020013 190 QGICLGTRFVASEESYAHPE 209 (332)
Q Consensus 190 ~gV~~GT~fl~t~Es~~~~~ 209 (332)
++|+|||+|+.|+||+.+..
T Consensus 270 d~V~vGt~f~~t~Es~~~~~ 289 (400)
T 3ffs_A 270 SSVMIGSILAGTEESPGEKE 289 (400)
T ss_dssp SEEEECGGGTTBTTSSCCEE
T ss_pred CEEEEChHHhcCCCCCchhh
Confidence 99999999999999998743
No 9
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.96 E-value=8.3e-29 Score=233.57 Aligned_cols=203 Identities=24% Similarity=0.359 Sum_probs=163.5
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHH
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKA 82 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~ 82 (332)
|++.+++++|||++||. ++++++|+.+++++||+|+|.. + .+++++.+.++++|+....++++++.......+.++.
T Consensus 39 lt~~~~l~~Pii~apM~-~vs~~~lA~avA~aGGlg~i~~-~-~s~e~~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~ 115 (366)
T 4fo4_A 39 LTKNIALNIPMVSASMD-TVTEARLAIALAQEGGIGFIHK-N-MSIEQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKA 115 (366)
T ss_dssp EETTEEESSSEEECCCT-TTCSHHHHHHHHHTTCEEEECS-S-SCHHHHHHHHHHHHTTTSCCCEEECCSCTTCHHHHHH
T ss_pred cccccccCCCEEeCCCC-CCChHHHHHHHHHcCCceEeec-C-CCHHHHHHHHHHHHhcCceeEEEEeccChhHHHHHHH
Confidence 56788999999999998 7999999999999999999986 3 6899999999999976434444444333345788999
Q ss_pred HHhcCCcEEEE--ccCCCcHHH---HHHHHhC--CCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCcccCC------C
Q 020013 83 ILSEKVAVLQV--SWGEYSEEL---VLEAHSA--GVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHVIG------Q 148 (332)
Q Consensus 83 ~~~~~~~~I~~--~~g~~~~~~---i~~~~~~--g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~------~ 148 (332)
++++++|+|++ +.|. +..+ ++.+++. +++++. .+.+.++++.++++|+|+|++ |.+.|+|... .
T Consensus 116 lieaGvd~I~idta~G~-~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~v-G~gpGs~~~tr~~~g~g 193 (366)
T 4fo4_A 116 LVEAGVDVLLIDSSHGH-SEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKV-GIGPGSICTTRIVTGVG 193 (366)
T ss_dssp HHHTTCSEEEEECSCTT-SHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEE-CSSCSTTBCHHHHHCCC
T ss_pred HHhCCCCEEEEeCCCCC-CHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEE-ecCCCCCCCcccccCcc
Confidence 99999999987 3343 4433 5566654 788764 699999999999999999999 7777776421 1
Q ss_pred CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHH
Q 020013 149 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEY 210 (332)
Q Consensus 149 ~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~ 210 (332)
.+.+.+++++.+..+..++|||++|||.+++++.+++++|||+|+|||+|+.++||+.+..+
T Consensus 194 ~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp~~~~~ 255 (366)
T 4fo4_A 194 VPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVIL 255 (366)
T ss_dssp CCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEE
T ss_pred cchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCCchhhh
Confidence 35577788777654323799999999999999999999999999999999999999987544
No 10
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.95 E-value=1.7e-27 Score=224.91 Aligned_cols=198 Identities=20% Similarity=0.290 Sum_probs=163.1
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHH
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKA 82 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~ 82 (332)
|++.+++++||+++||. ++++++|+.+++++||+|++.. ..+++...+.++++++.++.|+++|+..+. .+.++.
T Consensus 38 l~~~~~l~~Pii~apM~-~vt~~~lA~avA~~GGlgii~~--~~s~e~~~~~I~~vk~~~~~pvga~ig~~~--~e~a~~ 112 (361)
T 3khj_A 38 LTKNVSLKIPLISSAMD-TVTEHLMAVGMARLGGIGIIHK--NMDMESQVNEVLKVKNSGGLRVGAAIGVNE--IERAKL 112 (361)
T ss_dssp SSSSCEESSSEEECSST-TTCSHHHHHHHHHTTCEEEECS--SSCHHHHHHHHHHHHHTTCCCCEEEECTTC--HHHHHH
T ss_pred cccccccCCCEEeecCC-CCCcHHHHHHHHHcCCCeEEec--CCCHHHHHHHHHHHHhccCceEEEEeCCCH--HHHHHH
Confidence 55778899999999998 7999999999999999999985 468898899999999888899999998754 678899
Q ss_pred HHhcCCcEEEEc--cCCCcH---HHHHHHHhC-CCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCcccCC------CC
Q 020013 83 ILSEKVAVLQVS--WGEYSE---ELVLEAHSA-GVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHVIG------QD 149 (332)
Q Consensus 83 ~~~~~~~~I~~~--~g~~~~---~~i~~~~~~-g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~------~~ 149 (332)
+++.++|+|+++ .|. +. +.++.+++. +++++. .+.+.++++.+.++|+|+|++ |.+.|++... ..
T Consensus 113 l~eaGad~I~ld~a~G~-~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~V-G~~~Gs~~~tr~~~g~g~ 190 (361)
T 3khj_A 113 LVEAGVDVIVLDSAHGH-SLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKV-GIGPGSICTTRIVAGVGV 190 (361)
T ss_dssp HHHTTCSEEEECCSCCS-BHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEE-CSSCCTTCCHHHHTCBCC
T ss_pred HHHcCcCeEEEeCCCCC-cHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEE-ecCCCcCCCcccccCCCC
Confidence 999999999874 343 44 345555554 889885 899999999999999999999 6555554311 13
Q ss_pred chhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCC
Q 020013 150 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAH 207 (332)
Q Consensus 150 ~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~ 207 (332)
+.+..++++.+..+..++|||++|||.+++++.+++++|||+|++||+|+.++||+.+
T Consensus 191 p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~~ 248 (361)
T 3khj_A 191 PQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGE 248 (361)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSCE
T ss_pred CcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCcc
Confidence 4566677765443212799999999999999999999999999999999999999875
No 11
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.94 E-value=4.9e-26 Score=218.90 Aligned_cols=269 Identities=17% Similarity=0.259 Sum_probs=180.5
Q ss_pred hhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhc----------------------
Q 020013 5 GMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT---------------------- 62 (332)
Q Consensus 5 ~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~---------------------- 62 (332)
+.+++++||+++||+ +.++++++.+++++|++|++.. ..+++++...+.+++..+
T Consensus 37 ~g~~l~~Pii~Apm~-~~~~~ela~a~a~aGglg~i~~--~~s~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~ 113 (404)
T 1eep_A 37 KNISLNIPFLSSAMD-TVTESQMAIAIAKEGGIGIIHK--NMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAK 113 (404)
T ss_dssp SSCEESSSEEECCCT-TTCSHHHHHHHHHHTSEEEECS--SSCHHHHHHHHHHHHTCC----------------------
T ss_pred CCcccCCCEEeCCCC-CCCCHHHHHHHHHCCCEEEECC--CCCHHHHHHHHHHHHhhccCCCceeccccccccccccccC
Confidence 345689999999998 7999999999999999999984 468888777776655422
Q ss_pred ----------------CCc-----------EEEEeecCCCCHHHHHHHHhcCCcEEEE--ccCCC--cHHHHHHHHhC--
Q 020013 63 ----------------ERP-----------FGVGVVLAFPHNENIKAILSEKVAVLQV--SWGEY--SEELVLEAHSA-- 109 (332)
Q Consensus 63 ----------------~~p-----------~gvnl~~~~~~~~~~~~~~~~~~~~I~~--~~g~~--~~~~i~~~~~~-- 109 (332)
+.| +++|+.......+.++.+.+.++++|.+ ..|.+ ..+.++.+++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~ 193 (404)
T 1eep_A 114 QHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYP 193 (404)
T ss_dssp ----------------CCTTCCBCTTSCBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCT
T ss_pred CCCCHHHHHHHHHHhhhcchhhhhcccCceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCC
Confidence 223 5778765433456677788899999997 34543 12455666765
Q ss_pred CCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCccc-----CC-CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 110 GVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHV-----IG-QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 110 g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~-----~~-~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+++|+ ..+.+.++++.+.+.|+|+|++ |.+.|+|. .+ ..+.+..++.+.+.++..++|||++|||.+++++.
T Consensus 194 ~~pviv~~v~~~~~a~~a~~~Gad~I~v-g~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~ 272 (404)
T 1eep_A 194 NLDLIAGNIVTKEAALDLISVGADCLKV-GIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVV 272 (404)
T ss_dssp TCEEEEEEECSHHHHHHHHTTTCSEEEE-CSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHH
T ss_pred CCeEEEcCCCcHHHHHHHHhcCCCEEEE-CCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHH
Confidence 78988 4889999999999999999999 66555431 01 12345667777665433379999999999999999
Q ss_pred HHHHcCcceeeeccccccCccCCCCHHHHHHHhcCCCceEEEEecccCCCCCCceeecChHHHhhhcCCCCCccCCCccc
Q 020013 183 AALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWKNIPAHENEVNQPII 262 (332)
Q Consensus 183 ~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~~~~~~~~~~~~~~ 262 (332)
+++++|||+|++||+|+.++||+.+..||+- .. ...+ .|.......
T Consensus 273 ~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g------~~-~k~~-----~g~~~~g~~---------------------- 318 (404)
T 1eep_A 273 KAIAAGADSVMIGNLFAGTKESPSEEIIYNG------KK-FKSY-----VGMGSISAM---------------------- 318 (404)
T ss_dssp HHHHHTCSEEEECHHHHTBTTSSSCEEEETT------EE-EEC-------------------------------------
T ss_pred HHHHcCCCHHhhCHHHhcCCCCCcchhhhCC------eE-Eeec-----CCCCCHHHH----------------------
Confidence 9999999999999999999999998887751 11 1111 011000000
Q ss_pred ccccccchHHHHHHhhCCCCcccccCCc-cceeeeccccccccCCCCCHHHHHHHHHHHHHHHHH
Q 020013 263 GRSTIHGIEKKIHRLAGTVPNVTTTGDI-DSMVMFAGEGVGLIREILPAGEVVKQLVEGAQLLVH 326 (332)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gd~-~~~~~~aG~~~~~i~~i~~~~~iv~~l~~e~~~~~~ 326 (332)
++. .. ..+.+||. +...+..++..+++..+.|++++++.|.+|.+..+.
T Consensus 319 --------~~g--~~-----~~~~~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~ 368 (404)
T 1eep_A 319 --------KRG--SK-----SRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMG 368 (404)
T ss_dssp -----------------------------------------CEECCBCHHHHHHHHHHHHHHHHH
T ss_pred --------hhc--cc-----cchhcccccccccccCceeEEeccCCccHHHHHHHHHHHHHHHHH
Confidence 000 00 01122332 334456788888999999999999999999988753
No 12
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.92 E-value=5.2e-24 Score=200.51 Aligned_cols=199 Identities=16% Similarity=0.103 Sum_probs=146.2
Q ss_pred hhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHH
Q 020013 5 GMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAIL 84 (332)
Q Consensus 5 ~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~ 84 (332)
+.+++++||+++||+ +.++++++.+++++|++|++.. + .+++.....+++-+... .++++++-......+.++.++
T Consensus 52 ~~~~l~~PIi~ApM~-~~~~~~lA~Ava~~Gglg~i~~-~-~s~e~~~~~i~~~p~~l-~~v~~~~g~~~~~~~~~~~l~ 127 (351)
T 2c6q_A 52 KQTYSGVPIIAANMD-TVGTFEMAKVLCKFSLFTAVHK-H-YSLVQWQEFAGQNPDCL-EHLAASSGTGSSDFEQLEQIL 127 (351)
T ss_dssp CCEEEECCEEECSST-TTSCHHHHHHHHHTTCEEECCT-T-CCHHHHHHHHHHCGGGC-TTEEEEECSSHHHHHHHHHHH
T ss_pred cCccccCCEEECCCC-CCCcHHHHHHHHHCCCEEEEcC-C-CCHHHHHHHHhhCchhh-heeEeecCCChHHHHHHHHHH
Confidence 467899999999998 6899999999999999999986 3 47776665554422211 346666543222234566667
Q ss_pred hc--CCcEEEEc--cCCCcH---HHHHHHHhC--CCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCcccCC------C
Q 020013 85 SE--KVAVLQVS--WGEYSE---ELVLEAHSA--GVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHVIG------Q 148 (332)
Q Consensus 85 ~~--~~~~I~~~--~g~~~~---~~i~~~~~~--g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~------~ 148 (332)
+. ++++++++ +|. +. +.++.+++. +++++ ..+.+.++|+.+.++|+|+|++.+ ..|++..+ .
T Consensus 128 ~~~~g~~~i~i~~~~g~-~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~-g~G~~~~~r~~~g~~ 205 (351)
T 2c6q_A 128 EAIPQVKYICLDVANGY-SEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGI-GPGSVCTTRKKTGVG 205 (351)
T ss_dssp HHCTTCCEEEEECSCTT-BHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECS-SCSTTBCHHHHHCBC
T ss_pred hccCCCCEEEEEecCCC-cHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECC-CCCcCcCccccCCCC
Confidence 76 89998775 353 44 356666664 67776 578999999999999999998842 22221101 1
Q ss_pred CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHH
Q 020013 149 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPE 209 (332)
Q Consensus 149 ~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~ 209 (332)
.+++..++++.+..+..++|||++|||.++.++.++|++||++|+|||+|+.++||+.+..
T Consensus 206 ~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~ 266 (351)
T 2c6q_A 206 YPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELI 266 (351)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEE
T ss_pred ccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhh
Confidence 3456667777665432369999999999999999999999999999999999999988653
No 13
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.92 E-value=5.5e-24 Score=199.63 Aligned_cols=188 Identities=16% Similarity=0.223 Sum_probs=145.7
Q ss_pred CCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcC
Q 020013 8 GFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEK 87 (332)
Q Consensus 8 ~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~ 87 (332)
.+++||+++||. +++++++|.+++++|++|+|.. +.++|++.+.+++.+ .++++++-.+....+.++.+.++|
T Consensus 40 ~l~~Pii~ApM~-~vte~~lA~A~a~~Gg~gvi~~--~~s~ee~~~~i~~~~----~~~~~~~g~~~~~~e~~~~a~~aG 112 (361)
T 3r2g_A 40 TLNLPVISANMD-TITESNMANFMHSKGAMGALHR--FMTIEENIQEFKKCK----GPVFVSVGCTENELQRAEALRDAG 112 (361)
T ss_dssp EESSCEEECCST-TTCSHHHHHHHHHTTCEEBCCS--CSCHHHHHHHHHTCC----SCCBEEECSSHHHHHHHHHHHHTT
T ss_pred EcCCCEEECCCC-CchHHHHHHHHHHcCCCEEEeC--CCCHHHHHHHHhhcc----eEEEEEcCCCHHHHHHHHHHHHcC
Confidence 378999999997 7999999999999999999985 368887776665443 345555544333356788889999
Q ss_pred CcEEEEc--cCCCc--HHHHHHHHhC--CCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCcccC-----C-CCchhhh
Q 020013 88 VAVLQVS--WGEYS--EELVLEAHSA--GVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHVI-----G-QDGLISL 154 (332)
Q Consensus 88 ~~~I~~~--~g~~~--~~~i~~~~~~--g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~-----~-~~~~~~l 154 (332)
+|+|.++ .|... .+.++.+++. +++|+. .+.++++++.++++|+|+|++ |...|.+.. + ..+.+..
T Consensus 113 vdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~V-g~g~G~~~~tr~~~g~g~p~l~a 191 (361)
T 3r2g_A 113 ADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKA-GIGGGSVCSTRIKTGFGVPMLTC 191 (361)
T ss_dssp CCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEE-CCSSSSCHHHHHHHCCCCCHHHH
T ss_pred CCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEE-cCCCCcCccccccCCccHHHHHH
Confidence 9999884 34321 2567777775 889998 699999999999999999999 444444321 1 1234556
Q ss_pred HHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCC
Q 020013 155 LPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAH 207 (332)
Q Consensus 155 l~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~ 207 (332)
++++++.. + |||++|||.+++++.++|++|||+|+|||+|+.++||+.+
T Consensus 192 I~~~~~~~---~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~ 240 (361)
T 3r2g_A 192 IQDCSRAD---R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGE 240 (361)
T ss_dssp HHHHTTSS---S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSC
T ss_pred HHHHHHhC---C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCce
Confidence 66655433 3 9999999999999999999999999999999999999875
No 14
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.90 E-value=5e-23 Score=193.20 Aligned_cols=194 Identities=22% Similarity=0.255 Sum_probs=149.0
Q ss_pred CCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcC
Q 020013 8 GFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEK 87 (332)
Q Consensus 8 ~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~ 87 (332)
.+++||+++||+ ++++++++.+++++|++|++... .++..++.++++++. +.|+++|+.......+.++.+.+.+
T Consensus 44 ~l~~Pi~~a~ma-g~s~~~la~a~~~~gg~g~~~~~---~~~~~~~~i~~~~~~-g~~v~v~~g~~~~~~~~a~~~~~~g 118 (336)
T 1ypf_A 44 KFKLPVVPANMQ-TIIDERIATYLAENNYFYIMHRF---QPEKRISFIRDMQSR-GLIASISVGVKEDEYEFVQQLAAEH 118 (336)
T ss_dssp EESSSEEECSST-TTCCHHHHHHHHHTTCCCCCCCS---SGGGHHHHHHHHHHT-TCCCEEEECCSHHHHHHHHHHHHTT
T ss_pred EecCcEEECCCC-CCChHHHHHHHHhCCCEEEecCC---CCHHHHHHHHHHHhc-CCeEEEeCCCCHHHHHHHHHHHhcC
Confidence 478999999998 79999999999999999998753 345566777777653 4588998533211234456677888
Q ss_pred --CcEEEEcc--CCCc--HHHHHHHHhC--CCEEEEe-cCCHHHHHHHHHcCCCEEEEecCCCCccc-------CCCCc-
Q 020013 88 --VAVLQVSW--GEYS--EELVLEAHSA--GVKVVPQ-VGSFDEARKAVNAGVDAIIVQGREAGGHV-------IGQDG- 150 (332)
Q Consensus 88 --~~~I~~~~--g~~~--~~~i~~~~~~--g~~v~~~-v~s~~~a~~a~~~g~D~ivv~G~eaGGh~-------~~~~~- 150 (332)
+++|.++. |.+. .+.++.+++. +++++.. +.++++|+.++++|+|+|++.+. ||.. +...+
T Consensus 119 ~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~h--gG~~~~~~~~~~~g~~g 196 (336)
T 1ypf_A 119 LTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIG--PGKVCITKIKTGFGTGG 196 (336)
T ss_dssp CCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSS--CSTTCHHHHHHSCSSTT
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecC--CCceeecccccCcCCch
Confidence 89988753 4322 2566777665 6778766 88999999999999999999543 2221 00112
Q ss_pred -hhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHH
Q 020013 151 -LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYK 211 (332)
Q Consensus 151 -~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k 211 (332)
++.+++++++.+ ++|||++|||.+++|+.+++++|||+|++||+|+.|+||+.+..++
T Consensus 197 ~~~~~l~~v~~~~---~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~ 255 (336)
T 1ypf_A 197 WQLAALRWCAKAA---SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEK 255 (336)
T ss_dssp CHHHHHHHHHHTC---SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC--
T ss_pred hHHHHHHHHHHHc---CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeee
Confidence 688899999877 7999999999999999999999999999999999999999987776
No 15
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.84 E-value=2.1e-19 Score=176.55 Aligned_cols=202 Identities=22% Similarity=0.357 Sum_probs=149.9
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcC-------------------
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTE------------------- 63 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~------------------- 63 (332)
+++.+++++||+++||. .++..+++.++++.||+|+|.. + .+++...+.+++++...+
T Consensus 36 lt~~i~l~iPivsa~Md-tVTe~~ma~a~a~~GGiGvI~~-n-~s~e~qa~~V~~Vk~~~~~m~~d~v~v~~~~tv~ea~ 112 (496)
T 4fxs_A 36 LTKNIALNIPMVSASMD-TVTEARLAIALAQEGGIGFIHK-N-MSIEQQAAQVHQVKIFEAGVVTHPVTVRPEQTIADVM 112 (496)
T ss_dssp EETTEEESSSEEECCCT-TTCSHHHHHHHHHHTCEEEECS-S-SCHHHHHHHHHHHHHCCC--CBCCCCBCSSSBHHHHH
T ss_pred eccccccCCCceecCcc-hhhHHHHHHHHHHcCCcceecC-C-CCHHHHHHHHHhccccccccccCceEECCCCCHHHHH
Confidence 67788999999999998 7999999999999999999975 3 577766666666643110
Q ss_pred ------------------CcEEE---------------------------------------------------------
Q 020013 64 ------------------RPFGV--------------------------------------------------------- 68 (332)
Q Consensus 64 ------------------~p~gv--------------------------------------------------------- 68 (332)
+++|+
T Consensus 113 ~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G 192 (496)
T 4fxs_A 113 ELTHYHGFAGFPVVTENNELVGIITGRDVRFVTDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEF 192 (496)
T ss_dssp HHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCCCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTS
T ss_pred HHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCC
Confidence 01111
Q ss_pred ---Eee-----------------------------cCCCCHHHHHHHHhcCCcEEEEccCCC-cH---HHHHHHHhC--C
Q 020013 69 ---GVV-----------------------------LAFPHNENIKAILSEKVAVLQVSWGEY-SE---ELVLEAHSA--G 110 (332)
Q Consensus 69 ---nl~-----------------------------~~~~~~~~~~~~~~~~~~~I~~~~g~~-~~---~~i~~~~~~--g 110 (332)
+++ ......+.++.+.+.|+|+|.++.... +. +.++.+++. +
T Consensus 193 ~l~GiIT~~DIl~~~~~p~a~~d~~grL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~ 272 (496)
T 4fxs_A 193 QLKGMITAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPH 272 (496)
T ss_dssp BCCEEECCC-----CCCTTCCBCTTSCBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTT
T ss_pred CEEEeehHhHHHHhhcccchhhhcccceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCC
Confidence 000 000114567778889999999864331 22 566666664 6
Q ss_pred CEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCcccCC------CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHH
Q 020013 111 VKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHVIG------QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVA 183 (332)
Q Consensus 111 ~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~------~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~ 183 (332)
++++. .+.+.++++.+.++|+|+|++.+. .|++... ..+.+.+++++.+.++..++|||++|||.+++++.+
T Consensus 273 ~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g-~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~k 351 (496)
T 4fxs_A 273 LEIIGGNVATAEGARALIEAGVSAVKVGIG-PGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISK 351 (496)
T ss_dssp CCEEEEEECSHHHHHHHHHHTCSEEEECSS-CCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH
T ss_pred ceEEEcccCcHHHHHHHHHhCCCEEEECCC-CCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHH
Confidence 67654 689999999999999999998543 3444211 135678888888766434699999999999999999
Q ss_pred HHHcCcceeeeccccccCccCCCCH
Q 020013 184 ALSLGAQGICLGTRFVASEESYAHP 208 (332)
Q Consensus 184 al~~GA~gV~~GT~fl~t~Es~~~~ 208 (332)
++++|||+|++||+|+.|.||+...
T Consensus 352 ala~GAd~V~iGs~f~~t~Espg~~ 376 (496)
T 4fxs_A 352 AIAAGASCVMVGSMFAGTEEAPGEV 376 (496)
T ss_dssp HHHTTCSEEEESTTTTTBTTSSSCC
T ss_pred HHHcCCCeEEecHHHhcCCCCCcce
Confidence 9999999999999999999998764
No 16
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.84 E-value=1.9e-19 Score=177.41 Aligned_cols=129 Identities=22% Similarity=0.332 Sum_probs=100.5
Q ss_pred HHHHHHHhcCCcEEEEccCC-CcH---HHHHHHHhC--CCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCcccCC---
Q 020013 78 ENIKAILSEKVAVLQVSWGE-YSE---ELVLEAHSA--GVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHVIG--- 147 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~-~~~---~~i~~~~~~--g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~--- 147 (332)
+.++.+.+.++++|.+.... .+. +.++.+++. +++++ ..+.+.++++.+.++|+|+|++ |...|++...
T Consensus 259 era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~v-g~g~gsi~~~~~~ 337 (511)
T 3usb_A 259 TRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKV-GIGPGSICTTRVV 337 (511)
T ss_dssp HHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEE-CSSCSTTCCHHHH
T ss_pred HHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEE-CCCCccccccccc
Confidence 45666788999999885322 122 456666654 56666 4899999999999999999998 6666665311
Q ss_pred ---CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCC
Q 020013 148 ---QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAH 207 (332)
Q Consensus 148 ---~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~ 207 (332)
..+.+..++++.+..+..++|||++|||.+++++.+++++||++|++||+|+.+.||+..
T Consensus 338 ~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~~~~es~g~ 400 (511)
T 3usb_A 338 AGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGE 400 (511)
T ss_dssp HCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSC
T ss_pred cCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheecHHHhcCccCchh
Confidence 135677777776665433699999999999999999999999999999999999999876
No 17
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.83 E-value=1.8e-19 Score=176.90 Aligned_cols=131 Identities=27% Similarity=0.368 Sum_probs=102.7
Q ss_pred HHHHHHHHhcCCcEEEEccCC-CcH---HHHHHHHhC--CCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCcccC---
Q 020013 77 NENIKAILSEKVAVLQVSWGE-YSE---ELVLEAHSA--GVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHVI--- 146 (332)
Q Consensus 77 ~~~~~~~~~~~~~~I~~~~g~-~~~---~~i~~~~~~--g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~--- 146 (332)
.+.++.+.+.++|+|.++... .+. +.++.+++. +++++. .+.+.++++.+.++|+|+|++ |...|++..
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~v-g~g~Gs~~~t~~ 309 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKV-GIGPGSICTTRI 309 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEE-CSSCSTTCHHHH
T ss_pred HHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEE-CCCCCcCCCccc
Confidence 355677888899999885322 233 566667664 677765 599999999999999999998 444444321
Q ss_pred --C-CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCH
Q 020013 147 --G-QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHP 208 (332)
Q Consensus 147 --~-~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~ 208 (332)
+ ..+.+.+++++.+.++..++|||++|||.+++++.+++++||++|++||+|+.+.||+...
T Consensus 310 ~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~ 374 (490)
T 4avf_A 310 VAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEI 374 (490)
T ss_dssp HTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCE
T ss_pred cCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCce
Confidence 1 1356888889888775457999999999999999999999999999999999999998764
No 18
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.83 E-value=5.1e-19 Score=169.40 Aligned_cols=195 Identities=23% Similarity=0.316 Sum_probs=137.6
Q ss_pred CCccceecCCCCCCCCcHHHHHHHHhCCCceeecCC----CCCCHHHHHHHHHH--------------------------
Q 020013 8 GFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAP----DWEAPDYLRDLIRK-------------------------- 57 (332)
Q Consensus 8 ~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~----~~~~~e~~~~~i~~-------------------------- 57 (332)
.+++||+++||+ ++++++++.+++++|++|++... ++..++...+.+.+
T Consensus 65 ~l~~Pii~Apm~-g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~ 143 (393)
T 2qr6_A 65 KFDLPFMNHPSD-ALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTEL 143 (393)
T ss_dssp EESSSEEECCCT-TTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred ccCCCeEeCCCC-CcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHH
Confidence 378999999998 79999999999999999999762 12233332222222
Q ss_pred -------HHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc-------CC---CcHHHHHHHHhCCCEEEE-ecCC
Q 020013 58 -------TRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW-------GE---YSEELVLEAHSAGVKVVP-QVGS 119 (332)
Q Consensus 58 -------~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~-------g~---~~~~~i~~~~~~g~~v~~-~v~s 119 (332)
+++. ..++.+++... ...+..+.+.+.+++++.++. .. ...++.+..+..+++++. .+.+
T Consensus 144 ~~~~i~~~~~~-g~~v~~~v~~~-~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~ggi~t 221 (393)
T 2qr6_A 144 LSERIAQVRDS-GEIVAVRVSPQ-NVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIAGGVND 221 (393)
T ss_dssp HHHHHHHHHHT-TSCCEEEECTT-THHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEEECCCS
T ss_pred HHHHHHHHhhc-CCeEEEEeCCc-cHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEECCcCC
Confidence 2221 34555555432 123445566678999998762 11 112222333446787775 6889
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCcccC----C-CCchhhhHHHHHHH-------hCCCCCcEEeecCcCCHHHHHHHHHc
Q 020013 120 FDEARKAVNAGVDAIIVQGREAGGHVI----G-QDGLISLLPMVVDL-------IGDRDIPIIAAGGIVDARGYVAALSL 187 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv~G~eaGGh~~----~-~~~~~~ll~~i~~~-------~~~~~iPviaaGGI~~~~~v~~al~~ 187 (332)
+++++.+.+.|+|+|++ |. |||.+ + ..+++..++++++. +...++|||++|||.+++|+.+++++
T Consensus 222 ~e~a~~~~~~Gad~i~v-g~--Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalal 298 (393)
T 2qr6_A 222 YTTALHMMRTGAVGIIV-GG--GENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIAC 298 (393)
T ss_dssp HHHHHHHHTTTCSEEEE-SC--CSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEE-CC--CcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHc
Confidence 99999999999999999 54 55641 1 14667888888776 42112999999999999999999999
Q ss_pred CcceeeeccccccCccCCCCH
Q 020013 188 GAQGICLGTRFVASEESYAHP 208 (332)
Q Consensus 188 GA~gV~~GT~fl~t~Es~~~~ 208 (332)
|||+|++||+|+.+.||+.+.
T Consensus 299 GA~~V~iG~~~l~~~es~~~~ 319 (393)
T 2qr6_A 299 GADAVVLGSPLARAEEAAGKG 319 (393)
T ss_dssp TCSEEEECGGGGGSTTCTTTT
T ss_pred CCCEEEECHHHHcCCCCCCce
Confidence 999999999999999998864
No 19
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.80 E-value=5e-18 Score=167.90 Aligned_cols=131 Identities=25% Similarity=0.359 Sum_probs=103.7
Q ss_pred HHHHHHHhcCCcEEEEc--cCCCc--HHHHHHHHhC--CCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCcccC----
Q 020013 78 ENIKAILSEKVAVLQVS--WGEYS--EELVLEAHSA--GVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHVI---- 146 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~~--~~~i~~~~~~--g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~---- 146 (332)
+.++.+.+.|+|+|.++ .|.+. .+.++.+++. +++|+. .+.+.++++.+.++|+|+|++ |.+.|||..
T Consensus 258 ~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~v-g~~~G~~~~t~~~ 336 (514)
T 1jcn_A 258 YRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRV-GMGCGSICITQEV 336 (514)
T ss_dssp HHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEE-CSSCSCCBTTBCC
T ss_pred HHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEE-CCCCCcccccccc
Confidence 34567788999999984 44431 3667888776 889885 699999999999999999999 777777731
Q ss_pred ---C--CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHH
Q 020013 147 ---G--QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKR 212 (332)
Q Consensus 147 ---~--~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~ 212 (332)
+ ....+.+++++++.+ ++|||++|||.+++++.+++++|||+|+||++|+.++|++.+..||+
T Consensus 337 ~~~g~~~~~~~~~~~~~~~~~---~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~ 404 (514)
T 1jcn_A 337 MACGRPQGTAVYKVAEYARRF---GVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSD 404 (514)
T ss_dssp CSCCCCHHHHHHHHHHHHGGG---TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC-----
T ss_pred cCCCccchhHHHHHHHHHhhC---CCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeEC
Confidence 1 123466777777766 79999999999999999999999999999999999999999999986
No 20
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.78 E-value=1.7e-18 Score=170.49 Aligned_cols=137 Identities=23% Similarity=0.326 Sum_probs=106.8
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC--cHHHHHHHHhC--CCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCcccCC---
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY--SEELVLEAHSA--GVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHVIG--- 147 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~--~~~~i~~~~~~--g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~--- 147 (332)
+.++.+++.|+++|.++ .|.+ ..+.++.+++. +++++ ..+.+.++++.+.++|+|+|++ +.++|+|...
T Consensus 240 ~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v-~~~~G~~~~~~~~ 318 (494)
T 1vrd_A 240 ERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKV-GVGPGSICTTRVV 318 (494)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEE-CSSCSTTCHHHHH
T ss_pred HHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEE-cCCCCcccccccc
Confidence 45667788899999874 3443 23566777665 67765 6688999999999999999999 5555554311
Q ss_pred ---CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHHHh
Q 020013 148 ---QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLV 215 (332)
Q Consensus 148 ---~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~ 215 (332)
..+.+..++.+.+..+..++|||++|||.++.++.+++++|||+|++|++|+.++||+.+..||+.+.
T Consensus 319 ~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~ 389 (494)
T 1vrd_A 319 AGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRK 389 (494)
T ss_dssp HCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEE
T ss_pred CCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEE
Confidence 13456777777776433379999999999999999999999999999999999999999988876553
No 21
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.76 E-value=6.5e-17 Score=156.33 Aligned_cols=128 Identities=23% Similarity=0.339 Sum_probs=96.2
Q ss_pred HHHHHHHhcCCcEEEEc--cCCCcH---HHHHHHHhC--CCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCcccCC--
Q 020013 78 ENIKAILSEKVAVLQVS--WGEYSE---ELVLEAHSA--GVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHVIG-- 147 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~~~---~~i~~~~~~--g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~-- 147 (332)
+.++.+.++|+|+|.+. .|. .. +.++.+++. .+.|+ ..|.+.+.++.+.++|+|+|.| |...|.-+..
T Consensus 284 eR~~aLv~AGvD~iviD~ahGh-s~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkV-GiGpGSiCtTr~ 361 (556)
T 4af0_A 284 DRLKLLAEAGLDVVVLDSSQGN-SVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRI-GMGSGSICITQE 361 (556)
T ss_dssp HHHHHHHHTTCCEEEECCSCCC-SHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEE-CSSCSTTBCCTT
T ss_pred HHHHHHHhcCCcEEEEeccccc-cHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEee-cCCCCccccccc
Confidence 45677889999998873 243 34 445555554 56666 5789999999999999999988 4333332211
Q ss_pred ----CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCC
Q 020013 148 ----QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAH 207 (332)
Q Consensus 148 ----~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~ 207 (332)
..+.+..+.++.++....++|||+.|||.+..|+.+||++|||.|+||+.|..|.|||..
T Consensus 362 v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe 425 (556)
T 4af0_A 362 VMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGE 425 (556)
T ss_dssp TCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSC
T ss_pred ccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEEchhhccccCCCCc
Confidence 124456666666655444799999999999999999999999999999999999999863
No 22
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.75 E-value=5.1e-17 Score=144.04 Aligned_cols=163 Identities=15% Similarity=0.193 Sum_probs=128.3
Q ss_pred HHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCc-EEEEe-------ecCCCCHHHHHHHHhcCCcEEEEccC
Q 020013 25 PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERP-FGVGV-------VLAFPHNENIKAILSEKVAVLQVSWG 96 (332)
Q Consensus 25 ~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p-~gvnl-------~~~~~~~~~~~~~~~~~~~~I~~~~g 96 (332)
.++|.++.++|+.|+... +++ .++++|+.++.| +|++- ++..++.+.++.+.+.|+|+|.+...
T Consensus 39 ~~~A~a~~~~Ga~~i~~~----~~~----~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~ 110 (229)
T 3q58_A 39 AAMAQAAASAGAVAVRIE----GIE----NLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDAS 110 (229)
T ss_dssp HHHHHHHHHTTCSEEEEE----SHH----HHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHHCCCcEEEEC----CHH----HHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECcc
Confidence 578888888898887542 344 478888888999 56653 22234456788889999999987532
Q ss_pred C-----CcHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEE--ecCCCCcccCCCCchhhhHHHHHHHhCCCCCcE
Q 020013 97 E-----YSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIV--QGREAGGHVIGQDGLISLLPMVVDLIGDRDIPI 169 (332)
Q Consensus 97 ~-----~~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv--~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPv 169 (332)
. ...++++.+++.|+.++..+++.++++.+++.|+|+|.+ .|++.+++. ....+.+++++++. ++||
T Consensus 111 ~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~--~~~~~~li~~l~~~----~ipv 184 (229)
T 3q58_A 111 FRSRPVDIDSLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGPITP--VEPDLAMVTQLSHA----GCRV 184 (229)
T ss_dssp SSCCSSCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSSSCCC--SSCCHHHHHHHHTT----TCCE
T ss_pred ccCChHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEecCccCCCCCcC--CCCCHHHHHHHHHc----CCCE
Confidence 1 235788999999999999999999999999999999975 455444443 23457888888763 6999
Q ss_pred EeecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 170 IAAGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 170 iaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
|+.|||++++++.+++++||+||++||+|+.+
T Consensus 185 IA~GGI~t~~d~~~~~~~GadgV~VGsai~~p 216 (229)
T 3q58_A 185 IAEGRYNTPALAANAIEHGAWAVTVGSAITRI 216 (229)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEECHHHHCH
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEchHhcCh
Confidence 99999999999999999999999999999853
No 23
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.75 E-value=4.3e-17 Score=144.84 Aligned_cols=162 Identities=21% Similarity=0.272 Sum_probs=127.2
Q ss_pred HHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCc-EEEEe-------ecCCCCHHHHHHHHhcCCcEEEEccC
Q 020013 25 PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERP-FGVGV-------VLAFPHNENIKAILSEKVAVLQVSWG 96 (332)
Q Consensus 25 ~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p-~gvnl-------~~~~~~~~~~~~~~~~~~~~I~~~~g 96 (332)
.++|.++.++|+.++... +++ .++++|+.++.| +|++- ++..++.+.++.+.+.|+|+|.+...
T Consensus 39 ~~~A~a~~~~Ga~~i~~~----~~~----~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~ 110 (232)
T 3igs_A 39 AAMALAAEQAGAVAVRIE----GID----NLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGT 110 (232)
T ss_dssp HHHHHHHHHTTCSEEEEE----SHH----HHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHHCCCeEEEEC----CHH----HHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECcc
Confidence 578888888898886542 343 478888888999 45442 12223456788889999999987532
Q ss_pred C-----CcHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEE--ecCCCCcccCCCCchhhhHHHHHHHhCCCCCcE
Q 020013 97 E-----YSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIV--QGREAGGHVIGQDGLISLLPMVVDLIGDRDIPI 169 (332)
Q Consensus 97 ~-----~~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv--~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPv 169 (332)
. ...++++.+++.|+.++..+++.++++.+++.|+|+|.+ .|++.+++. ....+.+++++++. ++||
T Consensus 111 ~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~--~~~~~~~i~~l~~~----~ipv 184 (232)
T 3igs_A 111 ARQRPVAVEALLARIHHHHLLTMADCSSVDDGLACQRLGADIIGTTMSGYTTPDTP--EEPDLPLVKALHDA----GCRV 184 (232)
T ss_dssp SSCCSSCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHTTCSEEECTTTTSSSSSCC--SSCCHHHHHHHHHT----TCCE
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEEcCccCCCCCCC--CCCCHHHHHHHHhc----CCcE
Confidence 1 235788999999999999999999999999999999975 455444442 23468888888774 6999
Q ss_pred EeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 170 IAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 170 iaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
|+.|||++++++.+++++||+||++||+|+.
T Consensus 185 IA~GGI~t~~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 185 IAEGRYNSPALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEehHhcC
Confidence 9999999999999999999999999999985
No 24
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.73 E-value=1.9e-17 Score=162.57 Aligned_cols=197 Identities=20% Similarity=0.264 Sum_probs=115.3
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCC---HHH
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH---NEN 79 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~---~~~ 79 (332)
+++.+++++||+++||. ++++++++.+++++|++|++.. + .++++.++.+.++++..+ ++..|++...++ .+.
T Consensus 40 lt~~l~l~~PIi~a~m~-~vt~~ela~ava~~GglG~i~~-~-~~~e~~~~~I~~v~~~~~-~m~~~~~~v~~~~tv~ea 115 (486)
T 2cu0_A 40 ITPNVKLNIPILSAAMD-TVTEWEMAVAMAREGGLGVIHR-N-MGIEEQVEQVKRVKRAER-LIVEDVITIAPDETVDFA 115 (486)
T ss_dssp EETTEEESSSEEECCCT-TTCSHHHHHHHHHTTCEEEECS-S-SCHHHHHHHHHHHHTCC--------------------
T ss_pred ecCCcccccceEEccce-eecHHHHHHHHHhcCCceeecC-C-CCHHHHHHHHHhhcchhh-ccccCceEECCCCCHHHH
Confidence 57889999999999998 7999999999999999999975 3 678888888888876533 344444432221 111
Q ss_pred HHHHHhcCC----------------------------------cEEEEccCCCcHHHHHHHHhC----------------
Q 020013 80 IKAILSEKV----------------------------------AVLQVSWGEYSEELVLEAHSA---------------- 109 (332)
Q Consensus 80 ~~~~~~~~~----------------------------------~~I~~~~g~~~~~~i~~~~~~---------------- 109 (332)
++.+.+.+. +.+.+....+..+..+.+++.
T Consensus 116 ~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~~~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvG 195 (486)
T 2cu0_A 116 LFLMEKHGIDGLPVVEDEKVVGIITKKDIAAREGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVG 195 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHcCCcEEEEEECCEEEEEEEHHHhccCCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEE
Confidence 111111110 011111000011111111111
Q ss_pred ---------------------CCEEE-EecC--CHHHHHHHHHcCCCEEEEecCCCCcccCCC-----------------
Q 020013 110 ---------------------GVKVV-PQVG--SFDEARKAVNAGVDAIIVQGREAGGHVIGQ----------------- 148 (332)
Q Consensus 110 ---------------------g~~v~-~~v~--s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~----------------- 148 (332)
+..++ ..++ +.+.+....+.|+|.+++++ ++||..+.
T Consensus 196 iiT~~Dil~~~~~~~~~~~~~g~~~v~~~~~~~~~~~a~~l~~~gvd~lvvdt--a~G~~~~~L~~I~~l~~~~~vpvi~ 273 (486)
T 2cu0_A 196 LITMSDLVARKKYKNAVRDENGELLVAAAVSPFDIKRAIELDKAGVDVIVVDT--AHAHNLKAIKSMKEMRQKVDADFIV 273 (486)
T ss_dssp -----------CCTTCCBCTTSCBCCEEEECTTCHHHHHHHHHTTCSEEEEEC--SCCCCHHHHHHHHHHHHTCCSEEEE
T ss_pred EEEHHHHHHhhhccccccccCCceeecceechhhHHHHHHHHHhcCCceEEEe--cCCcEeehhhHHHHHHHHhCCcccc
Confidence 11111 1111 13566677788999988886 46663100
Q ss_pred ----------------------------------------CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC
Q 020013 149 ----------------------------------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 188 (332)
Q Consensus 149 ----------------------------------------~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G 188 (332)
...+..++++.+.. ++|||++|||.++.|+.++|++|
T Consensus 274 k~v~~~~~a~~l~G~d~v~vg~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~---~vpVia~GGi~~~~di~kalalG 350 (486)
T 2cu0_A 274 GNIANPKAVDDLTFADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEY---GLYVIADGGIRYSGDIVKAIAAG 350 (486)
T ss_dssp EEECCHHHHTTCTTSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHH---TCEEEEESCCCSHHHHHHHHHTT
T ss_pred CCcCCHHHHHHhhCCCeEEEeeeeccceeeeEEeecCcchHHHHHHHHHHHHHc---CCcEEecCCCCCHHHHHHHHHcC
Confidence 01122234455444 69999999999999999999999
Q ss_pred cceeeeccccccCccCCCCH
Q 020013 189 AQGICLGTRFVASEESYAHP 208 (332)
Q Consensus 189 A~gV~~GT~fl~t~Es~~~~ 208 (332)
||+|++||+|+.++||+.+.
T Consensus 351 A~~v~~g~~~~~~~e~~~~~ 370 (486)
T 2cu0_A 351 ADAVMLGNLLAGTKEAPGKE 370 (486)
T ss_dssp CSEEEESTTTTTBTTCCSCE
T ss_pred CCceeeChhhhcCccCchhh
Confidence 99999999999999999886
No 25
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.73 E-value=1.9e-16 Score=155.74 Aligned_cols=199 Identities=23% Similarity=0.356 Sum_probs=125.9
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCC---HHH
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH---NEN 79 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~---~~~ 79 (332)
|++.|++++||+++||. ++++++++.+++++|++|+|.. +.++++.++.+++++...+ ++..|++...++ .+.
T Consensus 37 lt~~l~~~~Piv~a~M~-~vt~~eLa~av~~~Gg~G~i~~--~~~~e~~~~~i~~v~~~~~-im~~~~~~v~~~~tv~ea 112 (491)
T 1zfj_A 37 LADNLTLNIPIITAAMD-TVTGSKMAIAIARAGGLGVIHK--NMSITEQAEEVRKVKRSEN-GVIIDPFFLTPEHKVSEA 112 (491)
T ss_dssp EETTEEESSSEEECCCT-TTCSHHHHHHHHHTTCEEEECC--SSCHHHHHHHHHHHHHHTT-TTSSSCCCBCSSSBHHHH
T ss_pred hhhcceecCceEecCch-hccHHHHHHHHHHcCCceEEeC--CCCHHHHHHHHHHHhhHHh-cCcCCCeEECCCCcHHHH
Confidence 57889999999999998 7999999999999999999975 3688888888888766432 222222221111 222
Q ss_pred HHHHHhcCCcEEEE----------------------------------------ccCCCcHHHHHHHHhCCCEEEE----
Q 020013 80 IKAILSEKVAVLQV----------------------------------------SWGEYSEELVLEAHSAGVKVVP---- 115 (332)
Q Consensus 80 ~~~~~~~~~~~I~~----------------------------------------~~g~~~~~~i~~~~~~g~~v~~---- 115 (332)
++.+.+.+...+-+ +...+..+..+.+++.++..++
T Consensus 113 ~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~ 192 (491)
T 1zfj_A 113 EELMQRYRISGVPIVETLANRKLVGIITNRDMRFISDYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDN 192 (491)
T ss_dssp HHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCSCSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECT
T ss_pred HHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhccCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 33333322221111 1011122333333333322111
Q ss_pred ----------------------------------ecC----CHHHHHHHHHcCCCEEEEecCCCCcccCC----------
Q 020013 116 ----------------------------------QVG----SFDEARKAVNAGVDAIIVQGREAGGHVIG---------- 147 (332)
Q Consensus 116 ----------------------------------~v~----s~~~a~~a~~~g~D~ivv~G~eaGGh~~~---------- 147 (332)
.++ +.++++.+.+.|+|.|++++. +||...
T Consensus 193 ~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~~G~d~ivi~~a--~g~~~~~~~~i~~l~~ 270 (491)
T 1zfj_A 193 SGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDTA--HGHSAGVLRKIAEIRA 270 (491)
T ss_dssp TSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHHTCSEEEECCS--CTTCHHHHHHHHHHHH
T ss_pred CCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHHcCCCeEEEeee--cCcchhHHHHHHHHHH
Confidence 111 257777788889998888763 445310
Q ss_pred -----------------------------------------------CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHH
Q 020013 148 -----------------------------------------------QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG 180 (332)
Q Consensus 148 -----------------------------------------------~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~ 180 (332)
..+.+..++++.......++|||++|||.++.|
T Consensus 271 ~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~d 350 (491)
T 1zfj_A 271 HFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGD 350 (491)
T ss_dssp HCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHH
T ss_pred HCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHH
Confidence 001122233333322112699999999999999
Q ss_pred HHHHHHcCcceeeeccccccCccCCCC
Q 020013 181 YVAALSLGAQGICLGTRFVASEESYAH 207 (332)
Q Consensus 181 v~~al~~GA~gV~~GT~fl~t~Es~~~ 207 (332)
+.+++++||++|++|++|+.++|++.+
T Consensus 351 i~kal~~GA~~v~vG~~~~~~~e~~~~ 377 (491)
T 1zfj_A 351 IVKALAAGGNAVMLGSMFAGTDEAPGE 377 (491)
T ss_dssp HHHHHHTTCSEEEESTTTTTBSSCCCC
T ss_pred HHHHHHcCCcceeeCHHhhCCCcCcce
Confidence 999999999999999999999998775
No 26
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.72 E-value=1.4e-16 Score=150.07 Aligned_cols=191 Identities=14% Similarity=0.096 Sum_probs=137.3
Q ss_pred CccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHH-HHHHHH--hhcCCcEEEEeecCCCC--HHHHHHH
Q 020013 9 FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRD-LIRKTR--SLTERPFGVGVVLAFPH--NENIKAI 83 (332)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~-~i~~~r--~~~~~p~gvnl~~~~~~--~~~~~~~ 83 (332)
+++||+++||. |+++..+...+.+.|++|++.++ +.+.+.+.. ..+++. ...+.|++++|+...+. .+..+.+
T Consensus 2 l~nriv~APM~-g~td~~~r~~~r~~Gg~gli~te-~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~p~~~~~aA~~a 79 (350)
T 3b0p_A 2 LDPRLSVAPMV-DRTDRHFRFLVRQVSLGVRLYTE-MTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIG 79 (350)
T ss_dssp CCCSEEECCCT-TTSSHHHHHHHHHHCSSSBEECC-CEEHHHHHHSCHHHHHCCCGGGCSEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCEEECCCC-CCCHHHHHHHHHHcCCCCEEEeC-CEEechhhcCCHHHHhccCCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence 57899999998 79999999999899999999875 455544311 001221 12468999999976541 2334455
Q ss_pred HhcCCcEEEEccCCCcHH-------------------HHHHHHh-CCCEEEEecC-----------CHHHHHHHHHcCCC
Q 020013 84 LSEKVAVLQVSWGEYSEE-------------------LVLEAHS-AGVKVVPQVG-----------SFDEARKAVNAGVD 132 (332)
Q Consensus 84 ~~~~~~~I~~~~g~~~~~-------------------~i~~~~~-~g~~v~~~v~-----------s~~~a~~a~~~g~D 132 (332)
.+.|+|.|.+++|+|... +++.+++ .+++|..++. ..+.++.+.+.|+|
T Consensus 80 ~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d 159 (350)
T 3b0p_A 80 EAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVK 159 (350)
T ss_dssp HHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCC
T ss_pred HHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCC
Confidence 677999999998875422 3344444 4778776431 24556788899999
Q ss_pred EEEEecCCCC-cccCC-----CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccC
Q 020013 133 AIIVQGREAG-GHVIG-----QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEES 204 (332)
Q Consensus 133 ~ivv~G~eaG-Gh~~~-----~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es 204 (332)
+|++.+.... |+.+. +...+.++.++++.++ ++|||+.|||.|++++.++++ |||+|++|++++..++-
T Consensus 160 ~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~--~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~l 234 (350)
T 3b0p_A 160 VFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP--QLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPFV 234 (350)
T ss_dssp EEEEECSCBC----------CCCCCHHHHHHHHHHCT--TSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGGG
T ss_pred EEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC--CCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcHH
Confidence 9999886543 33311 1235788889888763 699999999999999999998 99999999999987764
No 27
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.70 E-value=2.9e-18 Score=182.44 Aligned_cols=198 Identities=16% Similarity=0.145 Sum_probs=138.9
Q ss_pred hcCCccceecCCCCCCCCcH----HHHHHHHhCCCceeecCCCCCCHHHHHH------------------------HHHH
Q 020013 6 MLGFEYGIVQAPLGPDISGP----ELVAAVANAGGLGLLRAPDWEAPDYLRD------------------------LIRK 57 (332)
Q Consensus 6 ~l~~~~Pii~apM~~g~s~~----~la~avs~aGglG~i~~~~~~~~e~~~~------------------------~i~~ 57 (332)
.++|.+||+++||++|..++ .|+.+++++|+++.++.+ ..+++.++. .+..
T Consensus 863 ~~~I~~Pfii~aMS~GslS~ea~~aLA~Aas~aGg~~~tGeG-g~~pe~~~~eir~~~~~~~~~~p~~~~~~nG~~~~~~ 941 (1520)
T 1ofd_A 863 VESIVKRFCTGGMSLGALSREAHETLAIAMNRLGAKSNSGEG-GEDVVRYLTLDDVDSEGNSPTLPHLHGLQNGDTANSA 941 (1520)
T ss_dssp HHHHHTTEECCCBCTTTSCHHHHHHHHHHHHHHTCBCEECTT-CCCGGGGSCCCCCCTTSCCTTSTTCCSCCTTCCCCCS
T ss_pred cccccCceEecCcCcccccHHHHHHHHHHHHHcCCceEeCCC-CCCHHHHHhhhccccccccccccccccccCcchHHHH
Confidence 35789999999999775444 899999999999999885 567776531 1234
Q ss_pred HHhhcCCcEEEEeecCC--------------C----------CHHHHHHHH--hcCCcEEEEccC-C--Cc---HHHHHH
Q 020013 58 TRSLTERPFGVGVVLAF--------------P----------HNENIKAIL--SEKVAVLQVSWG-E--YS---EELVLE 105 (332)
Q Consensus 58 ~r~~~~~p~gvnl~~~~--------------~----------~~~~~~~~~--~~~~~~I~~~~g-~--~~---~~~i~~ 105 (332)
++++++.|||||+.... + ..+.+..+. ..+++.+..... + .+ .++++.
T Consensus 942 I~Ql~sg~FGVn~~~l~~ad~IeIKi~QGAKpG~GG~Lp~~kV~~~iA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~ 1021 (1520)
T 1ofd_A 942 IKQIASGRFGVTPEYLMSGKQLEIKMAQGAKPGEGGQLPGKKVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYD 1021 (1520)
T ss_dssp EEEECTTCTTCCHHHHHHCSEEEEECCCTTSTTSCCEECGGGCCHHHHHHHTSCTTCCEECCSSCTTCSSHHHHHHHHHH
T ss_pred HHHhcCCCCccChhhccchHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHcCCCCCCCeeCCCCCcCcCCHHHHHHHHHH
Confidence 55667788999854311 0 011222222 234555543210 0 12 256677
Q ss_pred HHhC--CCEEEEec----CCHHHHHHHHHcCCCEEEEecCCCCcccCC--------CCchhhhHHHHHHHhCC----CCC
Q 020013 106 AHSA--GVKVVPQV----GSFDEARKAVNAGVDAIIVQGREAGGHVIG--------QDGLISLLPMVVDLIGD----RDI 167 (332)
Q Consensus 106 ~~~~--g~~v~~~v----~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~--------~~~~~~ll~~i~~~~~~----~~i 167 (332)
+++. +++|+.++ +...+|+.+.++|+|+|+++|.++|++. . ..++..+|+++.+.+.. .++
T Consensus 1022 Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTga-sp~~~~~~~GlPt~~aL~ev~~al~~~glr~~I 1100 (1520)
T 1ofd_A 1022 LHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGA-SPLSSIKHAGSPWELGVTEVHRVLMENQLRDRV 1100 (1520)
T ss_dssp HHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSS-EEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGC
T ss_pred HHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCC-CcchhhcCCchhHHHHHHHHHHHHHhcCCCCCc
Confidence 7765 56665543 3467888999999999999999855331 1 13567788888776521 269
Q ss_pred cEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCC
Q 020013 168 PIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESY 205 (332)
Q Consensus 168 PviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~ 205 (332)
|||++|||.+++|+.+++++||++|++||+||.+.+|.
T Consensus 1101 pVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~ 1138 (1520)
T 1ofd_A 1101 LLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCI 1138 (1520)
T ss_dssp EEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCC
T ss_pred eEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHH
Confidence 99999999999999999999999999999999988764
No 28
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.69 E-value=5.8e-17 Score=150.15 Aligned_cols=154 Identities=19% Similarity=0.210 Sum_probs=109.0
Q ss_pred CCHHHHHH-HHHHHHh-hcCCcEEEEeecCCCC--HHHHHHHHh-cCCcEEEEccCCC------------c---HHHHHH
Q 020013 46 EAPDYLRD-LIRKTRS-LTERPFGVGVVLAFPH--NENIKAILS-EKVAVLQVSWGEY------------S---EELVLE 105 (332)
Q Consensus 46 ~~~e~~~~-~i~~~r~-~~~~p~gvnl~~~~~~--~~~~~~~~~-~~~~~I~~~~g~~------------~---~~~i~~ 105 (332)
.+++.+.+ .++.+++ .++.|+++|+...... .+..+.+.+ .++|.|.++++++ + .++++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~ 158 (311)
T 1ep3_A 79 PGLEVIMTEKLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKA 158 (311)
T ss_dssp CCHHHHHHTHHHHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHH
Confidence 45565533 4566766 4588999999876431 122333444 7899999887642 2 356677
Q ss_pred HHhC-CCEEEEec----CC-HHHHHHHHHcCCCEEEEecCCCCc-----------------ccCCCC---chhhhHHHHH
Q 020013 106 AHSA-GVKVVPQV----GS-FDEARKAVNAGVDAIIVQGREAGG-----------------HVIGQD---GLISLLPMVV 159 (332)
Q Consensus 106 ~~~~-g~~v~~~v----~s-~~~a~~a~~~g~D~ivv~G~eaGG-----------------h~~~~~---~~~~ll~~i~ 159 (332)
+++. +++++..+ .+ .+.++.+.+.|+|+|++.|.+.|. +. +.. ..+.++++++
T Consensus 159 v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~-g~~~~~~~~~~i~~i~ 237 (311)
T 1ep3_A 159 CKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLS-GPAIKPVALKLIHQVA 237 (311)
T ss_dssp HHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEE-SGGGHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCccc-CccchHHHHHHHHHHH
Confidence 7765 88887644 34 344888999999999997754333 21 111 1246677777
Q ss_pred HHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 160 DLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 160 ~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
+.+ ++|||++|||.+++++.+++++|||+|++||+|+..++
T Consensus 238 ~~~---~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~ 278 (311)
T 1ep3_A 238 QDV---DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFADPF 278 (311)
T ss_dssp TTC---SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTT
T ss_pred Hhc---CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcH
Confidence 765 79999999999999999999999999999999998655
No 29
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.68 E-value=1.1e-15 Score=150.53 Aligned_cols=129 Identities=29% Similarity=0.278 Sum_probs=99.6
Q ss_pred HHHHHHhcCCcEEEEcc--CCCcH---HHHHHHHhC--C-CEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCcccCCC-
Q 020013 79 NIKAILSEKVAVLQVSW--GEYSE---ELVLEAHSA--G-VKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQ- 148 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~--g~~~~---~~i~~~~~~--g-~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~- 148 (332)
.++.+.+.+++++.++. |. +. +.++.+++. + ++++ ..+.+.+.++.+.++|+|+|++ |.++|+|....
T Consensus 246 ~~~~l~e~gv~~l~Vd~~~g~-~~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~V-g~~~g~~~~~r~ 323 (503)
T 1me8_A 246 RVPALVEAGADVLCIDSSDGF-SEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKI-GIGGGSICITRE 323 (503)
T ss_dssp HHHHHHHHTCSEEEECCSCCC-SHHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEE-CSSCSTTCCSTT
T ss_pred HHHHHHhhhccceEEecccCc-ccchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEe-cccCCcCccccc
Confidence 35666777899887742 32 32 345556654 4 6655 6789999999999999999999 98888764221
Q ss_pred -----CchhhhHHHHHHHhCCC------CCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHH
Q 020013 149 -----DGLISLLPMVVDLIGDR------DIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPE 209 (332)
Q Consensus 149 -----~~~~~ll~~i~~~~~~~------~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~ 209 (332)
.+++..++++.+.+... ++|||++|||.++.++.++|++||++|+|||+|+.+.||+.+..
T Consensus 324 ~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~ 395 (503)
T 1me8_A 324 QKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKV 395 (503)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEE
T ss_pred ccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCceE
Confidence 35677777777654321 59999999999999999999999999999999999999987653
No 30
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.68 E-value=1.3e-15 Score=144.11 Aligned_cols=189 Identities=17% Similarity=0.249 Sum_probs=133.3
Q ss_pred hhcC--CccceecCCCCC-CCC----cHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCC-
Q 020013 5 GMLG--FEYGIVQAPLGP-DIS----GPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH- 76 (332)
Q Consensus 5 ~~l~--~~~Pii~apM~~-g~s----~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~- 76 (332)
+++| ++.||+.+||+. +++ +..++.++.++|..-++......+.+++ .... .+.|+.++++.+...
T Consensus 73 ~i~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v----~~~~--~~~~~~~QLy~~~d~~ 146 (368)
T 2nli_A 73 EILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEI----SEGL--NGGPRWFQIYMAKDDQ 146 (368)
T ss_dssp EETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHH----HHHH--TTCCEEEEECCBSSHH
T ss_pred EECCEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHH----HHhC--CCCCEEEEEeccCCHH
Confidence 4555 568999999961 234 3578888888886666654321234432 2211 357888888774432
Q ss_pred --HHHHHHHHhcCCcEEEEccCCCc----------------------------------------------HHHHHHHHh
Q 020013 77 --NENIKAILSEKVAVLQVSWGEYS----------------------------------------------EELVLEAHS 108 (332)
Q Consensus 77 --~~~~~~~~~~~~~~I~~~~g~~~----------------------------------------------~~~i~~~~~ 108 (332)
.+.++.+.+.|++++.++.+.+. .+.++.+++
T Consensus 147 ~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~ 226 (368)
T 2nli_A 147 QNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAG 226 (368)
T ss_dssp HHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHH
Confidence 34456666778888776654321 123455555
Q ss_pred -CCCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCccc-CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHH
Q 020013 109 -AGVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHV-IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL 185 (332)
Q Consensus 109 -~g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~-~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al 185 (332)
.+++++. .+.++++++.+.++|+|+|++.|. ||+. +...+++..++++++.+.. ++|||++|||.+++|+.++|
T Consensus 227 ~~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~--ggr~~~~g~~~~~~l~~v~~~v~~-~ipVia~GGI~~g~D~~kal 303 (368)
T 2nli_A 227 HSGLPVFVKGIQHPEDADMAIKRGASGIWVSNH--GARQLYEAPGSFDTLPAIAERVNK-RVPIVFDSGVRRGEHVAKAL 303 (368)
T ss_dssp HSSSCEEEEEECSHHHHHHHHHTTCSEEEECCG--GGTSCSSCCCHHHHHHHHHHHHTT-SSCEEECSSCCSHHHHHHHH
T ss_pred HcCCCEEEEcCCCHHHHHHHHHcCCCEEEEcCC--CcCCCCCCCChHHHHHHHHHHhCC-CCeEEEECCCCCHHHHHHHH
Confidence 4666664 578999999999999999999876 4543 2234678999999988743 59999999999999999999
Q ss_pred HcCcceeeeccccccCc
Q 020013 186 SLGAQGICLGTRFVASE 202 (332)
Q Consensus 186 ~~GA~gV~~GT~fl~t~ 202 (332)
++|||+|++|+.|+...
T Consensus 304 alGAd~V~iGr~~l~~~ 320 (368)
T 2nli_A 304 ASGADVVALGRPVLFGL 320 (368)
T ss_dssp HTTCSEEEECHHHHHHH
T ss_pred HcCCCEEEECHHHHHHH
Confidence 99999999999998763
No 31
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.67 E-value=1.5e-15 Score=143.05 Aligned_cols=193 Identities=19% Similarity=0.136 Sum_probs=131.4
Q ss_pred hhcC--CccceecCCCCCCCC-------cHHHHHHHHhCCCcee-ecCCC--CCCHHHHHHHHHHHHh-hcCCcEEEEee
Q 020013 5 GMLG--FEYGIVQAPLGPDIS-------GPELVAAVANAGGLGL-LRAPD--WEAPDYLRDLIRKTRS-LTERPFGVGVV 71 (332)
Q Consensus 5 ~~l~--~~~Pii~apM~~g~s-------~~~la~avs~aGglG~-i~~~~--~~~~e~~~~~i~~~r~-~~~~p~gvnl~ 71 (332)
+++| ++.|++.+||+ |.+ +..++.++.++| +++ ++... ...++. ....+.++. ..+.|+.+|+.
T Consensus 48 ~i~g~~~~~P~~iApm~-g~~~~~~~~~~~~~a~aa~~~G-~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~pv~~~i~ 124 (349)
T 1p0k_A 48 KIGELSSSSPIFINAMT-GGGGKLTYEINKSLARAASQAG-IPLAVGSQMSALKDPSE-RLSYEIVRKENPNGLIFANLG 124 (349)
T ss_dssp EETTEEESCSEEEECCC-CSCHHHHHHHHHHHHHHHHHHT-CCEECCCCTTTTTCHHH-HHHHHHHHHHCSSSCEEEEEE
T ss_pred EECCcccCCceEEcCcc-ccchhhhhHHHHHHHHHHHHcC-CcEEeccchhcccCccc-ccceehhhhhCCCceeEEeec
Confidence 3455 56899999997 577 667888877776 333 32211 112221 223333332 24789999987
Q ss_pred cCCCCHHHHHHHHhcCCcEEEEccCCC--------------cHHHHHHHHh-CCCEEEEec----CCHHHHHHHHHcCCC
Q 020013 72 LAFPHNENIKAILSEKVAVLQVSWGEY--------------SEELVLEAHS-AGVKVVPQV----GSFDEARKAVNAGVD 132 (332)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~I~~~~g~~--------------~~~~i~~~~~-~g~~v~~~v----~s~~~a~~a~~~g~D 132 (332)
.....+...+.+...++|+|.++.+++ ..+.++.+++ .+++|+.+. .+.++++.+.+.|+|
T Consensus 125 ~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad 204 (349)
T 1p0k_A 125 SEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAA 204 (349)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCS
T ss_pred CCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCC
Confidence 433323344445567899998876532 1245666664 478877653 689999999999999
Q ss_pred EEEEecCCCCcc-----------------cCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeec
Q 020013 133 AIIVQGREAGGH-----------------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 195 (332)
Q Consensus 133 ~ivv~G~eaGGh-----------------~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~G 195 (332)
+|++.|. ||+ .....+++..++++++.+. ++|||+.|||.+++|+.+++++|||+|++|
T Consensus 205 ~I~v~~~--ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~--~ipvia~GGI~~~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 205 AVDIGGY--GGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFP--ASTMIASGGLQDALDVAKAIALGASCTGMA 280 (349)
T ss_dssp EEEEEC-----------------CCGGGGTTCSCCHHHHHHHHHHHCT--TSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred EEEEcCC--CCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcC--CCeEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 9999875 331 1122356777888887652 799999999999999999999999999999
Q ss_pred cccccCccC
Q 020013 196 TRFVASEES 204 (332)
Q Consensus 196 T~fl~t~Es 204 (332)
|+|+...++
T Consensus 281 ~~~l~~~~~ 289 (349)
T 1p0k_A 281 GHFLKALTD 289 (349)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999988654
No 32
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.67 E-value=2e-17 Score=175.69 Aligned_cols=198 Identities=18% Similarity=0.199 Sum_probs=140.8
Q ss_pred cCCccceecCCCCCCCCcH----HHHHHHHhCCCceeecCCCCCCHHHHH------HHHHHHHhhcCCcEEEEeecCC--
Q 020013 7 LGFEYGIVQAPLGPDISGP----ELVAAVANAGGLGLLRAPDWEAPDYLR------DLIRKTRSLTERPFGVGVVLAF-- 74 (332)
Q Consensus 7 l~~~~Pii~apM~~g~s~~----~la~avs~aGglG~i~~~~~~~~e~~~------~~i~~~r~~~~~p~gvnl~~~~-- 74 (332)
.+|.+|++++||++|..++ .|+.+++++|+++.++.+ ..+++.++ ..+..+++.++.+||||+....
T Consensus 847 ~~I~~Pf~isaMS~GalS~ea~~aLA~Aa~~aGg~~~tGeG-g~~pe~~~~~~~g~~~~~~IrQ~asg~FGVn~~~l~~a 925 (1479)
T 1ea0_A 847 TAIRKRFITPGMSMGALSPEAHGTLNVAMNRIGAKSDSGEG-GEDPARFRPDKNGDNWNSAIKQVASGRFGVTAEYLNQC 925 (1479)
T ss_dssp HHHHTTEEEEECCBTTBCHHHHHHHHHHHHHTTCEEECCTT-CCCGGGSSBCTTSCBCCCSEEEECSSCTTCCHHHHTSC
T ss_pred ccccCCeEecCccccccCHHHHHHHHHHHHHcCCeeEcCCC-ccCHHHhhhccccchhhhhhhhhcCCCCCcChHHcccc
Confidence 3678999999999775554 899999999999999875 46776643 1334567777789999865421
Q ss_pred ------------C----------CHHHHHHHHh--cCCcEEEEccC-CC--c---HHHHHHHHhC--CCEEEEec----C
Q 020013 75 ------------P----------HNENIKAILS--EKVAVLQVSWG-EY--S---EELVLEAHSA--GVKVVPQV----G 118 (332)
Q Consensus 75 ------------~----------~~~~~~~~~~--~~~~~I~~~~g-~~--~---~~~i~~~~~~--g~~v~~~v----~ 118 (332)
+ ..+.+..+.. .+++.+...-. +. + .++++.+++. +++|+.++ +
T Consensus 926 ~~ieIKigQGAKpG~GG~Lp~~kv~~~IA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~g 1005 (1479)
T 1ea0_A 926 RELEIKVAQGAKPGEGGQLPGFKVTEMIARLRHSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSG 1005 (1479)
T ss_dssp SEEEEECCCTTSTTTCCEECGGGCCHHHHHHHTCCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTT
T ss_pred chHHHHHhccCCCCcCCCCCHHHHHHHHHHHcCCCCCCCccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCC
Confidence 0 0122333322 34555543210 10 1 2456777765 66766543 3
Q ss_pred CHHHHHHHHHcCCCEEEEecCCCCcccC-------CCCchhhhHHHHHHHhCC----CCCcEEeecCcCCHHHHHHHHHc
Q 020013 119 SFDEARKAVNAGVDAIIVQGREAGGHVI-------GQDGLISLLPMVVDLIGD----RDIPIIAAGGIVDARGYVAALSL 187 (332)
Q Consensus 119 s~~~a~~a~~~g~D~ivv~G~eaGGh~~-------~~~~~~~ll~~i~~~~~~----~~iPviaaGGI~~~~~v~~al~~ 187 (332)
...+|+.+.++|+|+|+++|.++|++.. ...++...|+++.+.+.. .++|||++|||.+++|+.+++++
T Consensus 1006 i~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaL 1085 (1479)
T 1ea0_A 1006 IGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAML 1085 (1479)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHT
T ss_pred hHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHc
Confidence 4678899999999999999998665421 013567788888887531 26999999999999999999999
Q ss_pred CcceeeeccccccCccCC
Q 020013 188 GAQGICLGTRFVASEESY 205 (332)
Q Consensus 188 GA~gV~~GT~fl~t~Es~ 205 (332)
||++|++||+||.+.+|.
T Consensus 1086 GAdaV~iGTafL~a~gc~ 1103 (1479)
T 1ea0_A 1086 GAEEFGIGTASLIAMGCI 1103 (1479)
T ss_dssp TCSEEECCHHHHHHHTCC
T ss_pred CCCeeeEcHHHHHHHHHH
Confidence 999999999999988764
No 33
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.66 E-value=5.1e-16 Score=146.12 Aligned_cols=192 Identities=18% Similarity=0.237 Sum_probs=118.5
Q ss_pred CccceecCCCCCCCC-----cHHHHHHHHhCCCceeecCCC--CCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHH
Q 020013 9 FEYGIVQAPLGPDIS-----GPELVAAVANAGGLGLLRAPD--WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIK 81 (332)
Q Consensus 9 ~~~Pii~apM~~g~s-----~~~la~avs~aGglG~i~~~~--~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~ 81 (332)
+++||+.+||+++.. +..++.+..++|..-.++... ...|+. ....-.|...+.++..|+-...+.++..+
T Consensus 85 l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~~~~--~~~~v~r~~P~~~~ianig~~~~~e~~~~ 162 (365)
T 3sr7_A 85 FDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKNPDD--TSYQVKKSRPHLLLATNIGLDKPYQAGLQ 162 (365)
T ss_dssp ESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC-------------------------CCEEEEEETTSCHHHHHH
T ss_pred ccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccccccCccc--cceEehhhCCCCcEEEEeCCCCCHHHHHH
Confidence 578999999985433 134777777777544443321 112332 11111222346777778766544344455
Q ss_pred HHHhcCCcEEEEccC----------CC-cH---HHHHHHHh-CCCEEEEe-c---CCHHHHHHHHHcCCCEEEEecCCCC
Q 020013 82 AILSEKVAVLQVSWG----------EY-SE---ELVLEAHS-AGVKVVPQ-V---GSFDEARKAVNAGVDAIIVQGREAG 142 (332)
Q Consensus 82 ~~~~~~~~~I~~~~g----------~~-~~---~~i~~~~~-~g~~v~~~-v---~s~~~a~~a~~~g~D~ivv~G~eaG 142 (332)
.+...++|++.+|.. +. .. +.++.+++ .+++|+.+ + .++++|+.+.++|+|+|++.|. |
T Consensus 163 ~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~--G 240 (365)
T 3sr7_A 163 AVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGR--G 240 (365)
T ss_dssp HHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCB--C
T ss_pred HHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCC--C
Confidence 555678998877632 21 11 34555554 47888876 6 5899999999999999999887 5
Q ss_pred cccC----------------CCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCC
Q 020013 143 GHVI----------------GQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 206 (332)
Q Consensus 143 Gh~~----------------~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~ 206 (332)
|+.. ...++...++.+.. +. .++|||++|||.++.|+.++|++|||+|++||.|+.+..+..
T Consensus 241 Gt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~-~~-~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G 318 (365)
T 3sr7_A 241 GTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQP-LM-DKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHS 318 (365)
T ss_dssp --------------CGGGTTCSCBHHHHHHHHGG-GT-TTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSC
T ss_pred CcccchhhccccccccccccccccHHHHHHHHHH-hc-CCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcC
Confidence 5431 11344566666543 32 269999999999999999999999999999999998755433
No 34
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.65 E-value=2.3e-15 Score=132.83 Aligned_cols=173 Identities=17% Similarity=0.291 Sum_probs=130.0
Q ss_pred cCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEE----------eecCCCCHHHHHHHH
Q 020013 15 QAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVG----------VVLAFPHNENIKAIL 84 (332)
Q Consensus 15 ~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvn----------l~~~~~~~~~~~~~~ 84 (332)
..||....+.++++.++.++|+.++.. .+++ .++++++.++.|+ ++ +++. +..+.++.+.
T Consensus 16 ~~p~~~~~~~~~~a~~~~~~Ga~~i~~----~~~~----~i~~i~~~~~~pv-~~~~~~~~~~~~~~i~-~~~~~i~~~~ 85 (223)
T 1y0e_A 16 DEPLHSSFIMSKMALAAYEGGAVGIRA----NTKE----DILAIKETVDLPV-IGIVKRDYDHSDVFIT-ATSKEVDELI 85 (223)
T ss_dssp TSTTCCHHHHHHHHHHHHHHTCSEEEE----ESHH----HHHHHHHHCCSCE-EEECBCCCTTCCCCBS-CSHHHHHHHH
T ss_pred CCCCCCCccHHHHHHHHHHCCCeeecc----CCHH----HHHHHHHhcCCCE-EeeeccCCCccccccC-CcHHHHHHHH
Confidence 347864356778999999999877643 2444 3667777778888 33 2222 2356788889
Q ss_pred hcCCcEEEEccCC------CcHHHHHHHHhC--CCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcc-cCC--CCchhh
Q 020013 85 SEKVAVLQVSWGE------YSEELVLEAHSA--GVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH-VIG--QDGLIS 153 (332)
Q Consensus 85 ~~~~~~I~~~~g~------~~~~~i~~~~~~--g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh-~~~--~~~~~~ 153 (332)
+.|++.|.++... ...++++.+++. +.+++..+.++++++.+.+.|+|+|.+......+. ... ....+.
T Consensus 86 ~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~ 165 (223)
T 1y0e_A 86 ESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQ 165 (223)
T ss_dssp HHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHH
T ss_pred hCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHH
Confidence 9999999987532 125788888887 99999999999999999999999997633211111 111 223467
Q ss_pred hHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 154 LLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 154 ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
+++++++.+ ++||++.|||.+++++.+++++|||+|++||+|+.
T Consensus 166 ~~~~~~~~~---~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~ 209 (223)
T 1y0e_A 166 FLKDVLQSV---DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR 209 (223)
T ss_dssp HHHHHHHHC---CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred HHHHHHhhC---CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC
Confidence 888888876 79999999999999999999999999999999875
No 35
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=99.63 E-value=7.8e-15 Score=128.09 Aligned_cols=178 Identities=20% Similarity=0.235 Sum_probs=131.5
Q ss_pred CcchhhcCCccceecCCCCCCC---CcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCH
Q 020013 1 MGWRGMLGFEYGIVQAPLGPDI---SGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHN 77 (332)
Q Consensus 1 ~~~~~~l~~~~Pii~apM~~g~---s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~ 77 (332)
|++.+.|. ++||+ |.-.+. ...+++.++ ..||+.++.. ++.+++. .+.++.+++ .+..++.+.++ ..
T Consensus 4 ~~~~~~l~-~~~ii--~vi~~~~~~~~~~~~~~l-~~gGv~~iel-~~k~~~~-~~~i~~~~~-~~~~~gag~vl---~~ 73 (207)
T 2yw3_A 4 MDPLAVLA-ESRLL--PLLTVRGGEDLLGLARVL-EEEGVGALEI-TLRTEKG-LEALKALRK-SGLLLGAGTVR---SP 73 (207)
T ss_dssp ---CHHHH-HHCEE--EEECCCSCCCHHHHHHHH-HHTTCCEEEE-ECSSTHH-HHHHHHHTT-SSCEEEEESCC---SH
T ss_pred chHHHHHH-hCCEE--EEEeCCCHHHHHHHHHHH-HHcCCCEEEE-eCCChHH-HHHHHHHhC-CCCEEEeCeEe---eH
Confidence 44445444 45665 321111 223444444 4578999987 4556655 467788887 67778888755 26
Q ss_pred HHHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHH
Q 020013 78 ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPM 157 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~ 157 (332)
+.++.+++.|+++++.+ + ...++++..+..|+++++.++|++++..+.+.|+|+|.+...+. ......++.
T Consensus 74 d~~~~A~~~GAd~v~~~-~-~d~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~v~~fpa~~-------~gG~~~lk~ 144 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSP-G-LLEEVAALAQARGVPYLPGVLTPTEVERALALGLSALKFFPAEP-------FQGVRVLRA 144 (207)
T ss_dssp HHHHHHHHHTCSEEEES-S-CCHHHHHHHHHHTCCEEEEECSHHHHHHHHHTTCCEEEETTTTT-------TTHHHHHHH
T ss_pred HHHHHHHHcCCCEEEcC-C-CCHHHHHHHHHhCCCEEecCCCHHHHHHHHHCCCCEEEEecCcc-------ccCHHHHHH
Confidence 88999999999999887 3 35678888888999999889999999999999999999943211 112456777
Q ss_pred HHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 158 VVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 158 i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
++..++ ++|+++.||| +.+|+.+++++||++|.+||+++.
T Consensus 145 l~~~~~--~ipvvaiGGI-~~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 145 YAEVFP--EVRFLPTGGI-KEEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp HHHHCT--TCEEEEBSSC-CGGGHHHHHTCSSBSCEEESGGGS
T ss_pred HHhhCC--CCcEEEeCCC-CHHHHHHHHhCCCcEEEEehhhhC
Confidence 777664 6999999999 789999999999999999999887
No 36
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.61 E-value=1.6e-14 Score=128.31 Aligned_cols=163 Identities=18% Similarity=0.316 Sum_probs=124.3
Q ss_pred cHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcE-EEE--------eecCCCCHHHHHHHHhcCCcEEEEc
Q 020013 24 GPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPF-GVG--------VVLAFPHNENIKAILSEKVAVLQVS 94 (332)
Q Consensus 24 ~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~-gvn--------l~~~~~~~~~~~~~~~~~~~~I~~~ 94 (332)
..+++.++.++|+.++.. .+++ .++.+|+.++.|+ +++ +++. +..+.++.+.+.|+++|.++
T Consensus 38 ~~~~a~~~~~~G~~~i~~----~~~~----~i~~i~~~~~~p~i~~~~~~~~~~~~~i~-~~~~~i~~~~~~Gad~V~l~ 108 (234)
T 1yxy_A 38 MPLMAKAAQEAGAVGIRA----NSVR----DIKEIQAITDLPIIGIIKKDYPPQEPFIT-ATMTEVDQLAALNIAVIAMD 108 (234)
T ss_dssp HHHHHHHHHHHTCSEEEE----ESHH----HHHHHHTTCCSCEEEECBCCCTTSCCCBS-CSHHHHHHHHTTTCSEEEEE
T ss_pred HHHHHHHHHHCCCcEeec----CCHH----HHHHHHHhCCCCEEeeEcCCCCccccccC-ChHHHHHHHHHcCCCEEEEc
Confidence 467999999988877643 2454 3677888888898 321 2222 23578889999999999987
Q ss_pred cCC-------CcHHHHHHHHhC--CCEEEEecCCHHHHHHHHHcCCCEE--EEecCCCCcccCCCCchhhhHHHHHHHhC
Q 020013 95 WGE-------YSEELVLEAHSA--GVKVVPQVGSFDEARKAVNAGVDAI--IVQGREAGGHVIGQDGLISLLPMVVDLIG 163 (332)
Q Consensus 95 ~g~-------~~~~~i~~~~~~--g~~v~~~v~s~~~a~~a~~~g~D~i--vv~G~eaGGh~~~~~~~~~ll~~i~~~~~ 163 (332)
... ...++++.+++. +.+++..+.+.++++.+++.|+|+| .+.|...+.+. .....+.+++++++.
T Consensus 109 ~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~~-~~~~~~~~i~~~~~~-- 185 (234)
T 1yxy_A 109 CTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQ-EAGPDVALIEALCKA-- 185 (234)
T ss_dssp CCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSCC-SSSCCHHHHHHHHHT--
T ss_pred ccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCCCCcC-CCCCCHHHHHHHHhC--
Confidence 431 235788888876 8899999999999999999999999 56666443321 122346777777663
Q ss_pred CCCCcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 164 DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 164 ~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
++||+++|||.+++++.+++.+|||+|++||+|+.
T Consensus 186 --~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 186 --GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR 220 (234)
T ss_dssp --TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC
T ss_pred --CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC
Confidence 59999999998899999999999999999999886
No 37
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.61 E-value=1.2e-14 Score=135.22 Aligned_cols=185 Identities=16% Similarity=0.174 Sum_probs=128.2
Q ss_pred CCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHH----HHHHHHHhhcCCcEEEEeecCCCC--HHHHH
Q 020013 8 GFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLR----DLIRKTRSLTERPFGVGVVLAFPH--NENIK 81 (332)
Q Consensus 8 ~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~----~~i~~~r~~~~~p~gvnl~~~~~~--~~~~~ 81 (332)
.++.||+.+||. ++++..+...+++.|+ |++.++ +.+++.+. ..++.+....+.|+.++|+...+. .+..+
T Consensus 2 ~l~nri~~APM~-~~t~~~~r~~~~~~G~-gli~te-~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~g~~~~~~~~aa~ 78 (318)
T 1vhn_A 2 SLEVKVGLAPMA-GYTDSAFRTLAFEWGA-DFAFSE-MVSAKGFLMNSQKTEELLPQPHERNVAVQIFGSEPNELSEAAR 78 (318)
T ss_dssp ---CEEEECCCT-TTCSHHHHHHHHTTTC-CCEECS-CEEHHHHHTTCHHHHHHSCCTTCTTEEEEEECSCHHHHHHHHH
T ss_pred ccCCCEEECCCC-CCCcHHHHHHHHHHCc-CEEEeC-CEEEcccccCCHhHHHhhhCcCCCeEEEEeCCCCHHHHHHHHH
Confidence 467899999998 7999999988887764 888765 34443221 122333233568999999965431 12234
Q ss_pred HHHhcCCcEEEEccCCCcH-------------------HHHHHHHh-CCCEEEEecC-------CHHHHHHHHHcCCCEE
Q 020013 82 AILSEKVAVLQVSWGEYSE-------------------ELVLEAHS-AGVKVVPQVG-------SFDEARKAVNAGVDAI 134 (332)
Q Consensus 82 ~~~~~~~~~I~~~~g~~~~-------------------~~i~~~~~-~g~~v~~~v~-------s~~~a~~a~~~g~D~i 134 (332)
.+.+. +|.|.+++|+|.. ++++.+++ .+++|..++. +.+.++.+.+.|+|+|
T Consensus 79 ~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i 157 (318)
T 1vhn_A 79 ILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEV 157 (318)
T ss_dssp HHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEE
T ss_pred HHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEE
Confidence 44556 9999999887543 22444544 4778876642 2367888899999999
Q ss_pred EEecCCC-CcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHH-cCcceeeeccccccCcc
Q 020013 135 IVQGREA-GGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS-LGAQGICLGTRFVASEE 203 (332)
Q Consensus 135 vv~G~ea-GGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~GT~fl~t~E 203 (332)
++.|... ++.. + ...+.+++++++ ++|||+.|||.+++++.++++ .|||+|++|++++..++
T Consensus 158 ~v~g~~~~~~~~-~-~~~~~~i~~i~~-----~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~ 221 (318)
T 1vhn_A 158 FIHTRTVVQSFT-G-RAEWKALSVLEK-----RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPW 221 (318)
T ss_dssp EEESSCTTTTTS-S-CCCGGGGGGSCC-----SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTT
T ss_pred EEcCCCccccCC-C-CcCHHHHHHHHc-----CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcc
Confidence 9987533 2222 1 234566665544 699999999999999999999 79999999999998765
No 38
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.60 E-value=3.3e-14 Score=132.73 Aligned_cols=188 Identities=16% Similarity=0.155 Sum_probs=126.9
Q ss_pred hhcC--CccceecCCCCC-C--CCc--HHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCC-
Q 020013 5 GMLG--FEYGIVQAPLGP-D--ISG--PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH- 76 (332)
Q Consensus 5 ~~l~--~~~Pii~apM~~-g--~s~--~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~- 76 (332)
++|| +..||+.+|++. + ..+ ..++.+.+++|-.-++......+.|++.+ . ..+.|+-..+.++.+.
T Consensus 62 ~llG~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~----~--~~~~~~wfQlY~~~d~~ 135 (352)
T 3sgz_A 62 TIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVA----A--APEGFRWFQLYMKSDWD 135 (352)
T ss_dssp EETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHH----H--STTCEEEEECCCCSCHH
T ss_pred EECCcccCCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHH----h--ccCccceeccccCCCHH
Confidence 5677 567999999863 1 122 34556666667555555433345554332 1 1234555565554331
Q ss_pred --HHHHHHHHhcCCcEEEEccCC---------------------------------------------CcHHHHHHHHh-
Q 020013 77 --NENIKAILSEKVAVLQVSWGE---------------------------------------------YSEELVLEAHS- 108 (332)
Q Consensus 77 --~~~~~~~~~~~~~~I~~~~g~---------------------------------------------~~~~~i~~~~~- 108 (332)
.+.++.+.+.|.+.+.+.... ..-+.++.+++
T Consensus 136 ~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~ 215 (352)
T 3sgz_A 136 FNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSI 215 (352)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHHh
Confidence 234555666677665543211 11145666665
Q ss_pred CCCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCccc-CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHH
Q 020013 109 AGVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHV-IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS 186 (332)
Q Consensus 109 ~g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~-~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~ 186 (332)
.+++++ ..+.+.++|+.+.+.|+|+|++.|. ||+. ++..+++..++++++.+.. ++|||++|||.++.|+.++|+
T Consensus 216 ~~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~--GG~~~d~~~~~~~~L~~i~~av~~-~ipVia~GGI~~g~Dv~kaLa 292 (352)
T 3sgz_A 216 TRLPIILKGILTKEDAELAMKHNVQGIVVSNH--GGRQLDEVSASIDALREVVAAVKG-KIEVYMDGGVRTGTDVLKALA 292 (352)
T ss_dssp CCSCEEEEEECSHHHHHHHHHTTCSEEEECCG--GGTSSCSSCCHHHHHHHHHHHHTT-SSEEEEESSCCSHHHHHHHHH
T ss_pred cCCCEEEEecCcHHHHHHHHHcCCCEEEEeCC--CCCccCCCccHHHHHHHHHHHhCC-CCeEEEECCCCCHHHHHHHHH
Confidence 366665 5578999999999999999999886 5542 2335678999999988753 699999999999999999999
Q ss_pred cCcceeeeccccccC
Q 020013 187 LGAQGICLGTRFVAS 201 (332)
Q Consensus 187 ~GA~gV~~GT~fl~t 201 (332)
+||++|++||.|+..
T Consensus 293 lGA~aV~iGr~~l~~ 307 (352)
T 3sgz_A 293 LGARCIFLGRPILWG 307 (352)
T ss_dssp TTCSEEEESHHHHHH
T ss_pred cCCCEEEECHHHHHH
Confidence 999999999999864
No 39
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.60 E-value=1.6e-14 Score=137.67 Aligned_cols=188 Identities=19% Similarity=0.217 Sum_probs=129.0
Q ss_pred hhcC--CccceecCCCCCCCCc-------HHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCC
Q 020013 5 GMLG--FEYGIVQAPLGPDISG-------PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFP 75 (332)
Q Consensus 5 ~~l~--~~~Pii~apM~~g~s~-------~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~ 75 (332)
++|| ++.||+.+||+ .+. ..++.++.++|...++......+.+++ ... ..+.|+.++++.+..
T Consensus 87 ~i~G~~l~~Pi~iAPmg--~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v----~~~--~~~~~~~~QLy~~~d 158 (392)
T 2nzl_A 87 SVLGQRVSMPICVGATA--MQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEV----AEA--GPEALRWLQLYIYKD 158 (392)
T ss_dssp EETTEEESSSEEECCCS--CGGGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHH----HHH--CTTSEEEEEECCBSS
T ss_pred EECCEecCCceEecccc--ccccccchHHHHHHHHHHHcCCCeeccchHHHHHHHH----HHh--cCCCcEEEEEEecCC
Confidence 4566 56899999994 332 248888888887666554322344432 221 135788888876433
Q ss_pred C---HHHHHHHHhcCCcEEEEccCCC------------------------------------------------------
Q 020013 76 H---NENIKAILSEKVAVLQVSWGEY------------------------------------------------------ 98 (332)
Q Consensus 76 ~---~~~~~~~~~~~~~~I~~~~g~~------------------------------------------------------ 98 (332)
. .+.++.+.+.+++++.+..+.+
T Consensus 159 ~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~ 238 (392)
T 2nzl_A 159 REVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPS 238 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTT
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChH
Confidence 1 3445566667887766532111
Q ss_pred -cHHHHHHHHh-CCCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCccc-CCCCchhhhHHHHHHHhCCCCCcEEeecC
Q 020013 99 -SEELVLEAHS-AGVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHV-IGQDGLISLLPMVVDLIGDRDIPIIAAGG 174 (332)
Q Consensus 99 -~~~~i~~~~~-~g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~-~~~~~~~~ll~~i~~~~~~~~iPviaaGG 174 (332)
..+.++.+++ .+++|+. .+.++++++.+.++|+|+|++.|. ||+. +...+++..++++++.+.. ++|||++||
T Consensus 239 ~~~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~~--ggr~~~~g~~~~~~l~~v~~av~~-~ipVia~GG 315 (392)
T 2nzl_A 239 ISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNH--GARQLDGVPATIDVLPEIVEAVEG-KVEVFLDGG 315 (392)
T ss_dssp CCHHHHHHHC--CCSCEEEEEECCHHHHHHHHHTTCCEEEECCG--GGTSSTTCCCHHHHHHHHHHHHTT-SSEEEECSS
T ss_pred HHHHHHHHHHHhhCCCEEEEecCCHHHHHHHHHcCCCEEEeCCC--CCCcCCCCcChHHHHHHHHHHcCC-CCEEEEECC
Confidence 1122344444 3566664 578999999999999999999765 3432 2234678899999988743 599999999
Q ss_pred cCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 175 IVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 175 I~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
|.++.|+.++|++|||+|++|+.|+....
T Consensus 316 I~~g~Dv~kalalGAd~V~iGr~~l~~~~ 344 (392)
T 2nzl_A 316 VRKGTDVLKALALGAKAVFVGRPIVWGLA 344 (392)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCeeEECHHHHHHHH
Confidence 99999999999999999999999997643
No 40
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.59 E-value=2.1e-14 Score=135.51 Aligned_cols=188 Identities=14% Similarity=0.109 Sum_probs=122.6
Q ss_pred CccceecCCCCCCCCcHH------HHHHHHhCCCceeecCCC--CCCHHHHHHHHHHHHh-hcCCcEEEEeecCC----C
Q 020013 9 FEYGIVQAPLGPDISGPE------LVAAVANAGGLGLLRAPD--WEAPDYLRDLIRKTRS-LTERPFGVGVVLAF----P 75 (332)
Q Consensus 9 ~~~Pii~apM~~g~s~~~------la~avs~aGglG~i~~~~--~~~~e~~~~~i~~~r~-~~~~p~gvnl~~~~----~ 75 (332)
+++|++.+||++ .+... |+.++.+.|..-.++... ..+|+. .+..+-+|+ ..+.|+-.|+-..+ .
T Consensus 58 l~~Pv~ia~MtG-gt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~-~~s~~~vr~~ap~~~~~anlg~~ql~~~~ 135 (368)
T 3vkj_A 58 ISVPVMVTGMTG-GRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA-RESFAIVRKVAPTIPIIANLGMPQLVKGY 135 (368)
T ss_dssp ESSSEEECCCCC-SSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG-SHHHHHHHHHCSSSCEEEEEEGGGGGTTC
T ss_pred ccCCeEEecCCC-CCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH-HhhHHHHHHhCcCcceecCcCeeecCCCC
Confidence 577999999984 55433 677777777544444320 113332 222222343 24567766665521 1
Q ss_pred CHHHHHH-HHhcCCcEEEEcc----------CCC-----cHHHHHHHHh-CCCEEEEe-c---CCHHHHHHHHHcCCCEE
Q 020013 76 HNENIKA-ILSEKVAVLQVSW----------GEY-----SEELVLEAHS-AGVKVVPQ-V---GSFDEARKAVNAGVDAI 134 (332)
Q Consensus 76 ~~~~~~~-~~~~~~~~I~~~~----------g~~-----~~~~i~~~~~-~g~~v~~~-v---~s~~~a~~a~~~g~D~i 134 (332)
..+.+.. +...+++++.+|. |+. ..+.++.+++ .+++|+.+ + .++++|+.+.++|+|+|
T Consensus 136 ~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I 215 (368)
T 3vkj_A 136 GLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNF 215 (368)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEE
Confidence 1233433 3334666666653 221 1345556655 47888876 5 48999999999999999
Q ss_pred EEecCCCCcccC----------------------C--CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcc
Q 020013 135 IVQGREAGGHVI----------------------G--QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQ 190 (332)
Q Consensus 135 vv~G~eaGGh~~----------------------~--~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~ 190 (332)
++.|. ||..+ . ..++...++++++.++ ++|||++|||.++.|+.+++++|||
T Consensus 216 ~V~g~--GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~--~ipvia~GGI~~~~d~~kal~lGA~ 291 (368)
T 3vkj_A 216 DTSGQ--GGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP--DSFLVGSGGIRSGLDAAKAIALGAD 291 (368)
T ss_dssp ECCCB--TSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST--TCEEEEESSCCSHHHHHHHHHHTCS
T ss_pred EEeCC--CCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC--CCcEEEECCCCCHHHHHHHHHcCCC
Confidence 99887 55210 0 1244566778888774 5999999999999999999999999
Q ss_pred eeeeccccccCc
Q 020013 191 GICLGTRFVASE 202 (332)
Q Consensus 191 gV~~GT~fl~t~ 202 (332)
+|++|+.|+.+.
T Consensus 292 ~v~ig~~~l~~~ 303 (368)
T 3vkj_A 292 IAGMALPVLKSA 303 (368)
T ss_dssp EEEECHHHHHHH
T ss_pred EEEEcHHHHHHH
Confidence 999999999743
No 41
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.58 E-value=4.9e-14 Score=138.52 Aligned_cols=194 Identities=15% Similarity=0.219 Sum_probs=128.0
Q ss_pred hhcC--CccceecCCCCC---CC---CcHHHHHHHHh--CCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCC
Q 020013 5 GMLG--FEYGIVQAPLGP---DI---SGPELVAAVAN--AGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAF 74 (332)
Q Consensus 5 ~~l~--~~~Pii~apM~~---g~---s~~~la~avs~--aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~ 74 (332)
++|| ++.||+.+||++ +. .+..++.+..+ +|..-++......+.+.+. +.......|+.+.+++..
T Consensus 182 ~i~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~----~~~~~~~~~~~~QLy~~~ 257 (511)
T 1kbi_A 182 DMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEII----EAAPSDKQIQWYQLYVNS 257 (511)
T ss_dssp EETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHH----HTCCCSSCCEEEEECCCS
T ss_pred ccCCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHH----hhcCCCCCCeEEEEeecC
Confidence 4556 568999999983 21 24556666655 5543333321123444322 111012457777776433
Q ss_pred CC---HHHHHHHHhcCCcEEEEccCCC----------------------------------------------cHHHHHH
Q 020013 75 PH---NENIKAILSEKVAVLQVSWGEY----------------------------------------------SEELVLE 105 (332)
Q Consensus 75 ~~---~~~~~~~~~~~~~~I~~~~g~~----------------------------------------------~~~~i~~ 105 (332)
.. .+.++.+.+.|++.|.++.+.+ .-+.++.
T Consensus 258 d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~ 337 (511)
T 1kbi_A 258 DRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEE 337 (511)
T ss_dssp SHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHHH
Confidence 21 2345556667888765554311 0234566
Q ss_pred HHh-CCCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCccc-CCCCchhhhHHHHHHHhCC----CCCcEEeecCcCCH
Q 020013 106 AHS-AGVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHV-IGQDGLISLLPMVVDLIGD----RDIPIIAAGGIVDA 178 (332)
Q Consensus 106 ~~~-~g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~-~~~~~~~~ll~~i~~~~~~----~~iPviaaGGI~~~ 178 (332)
+++ .+++|+. .+.++++|+.+.++|+|+|++.|. ||.. ....+.+..++++++.+.. .++|||++|||.++
T Consensus 338 lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~h--gG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g 415 (511)
T 1kbi_A 338 LKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNH--GGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRG 415 (511)
T ss_dssp HHHHCSSCEEEEEECSHHHHHHHHHTTCSEEEECCT--TTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSH
T ss_pred HHHHhCCcEEEEeCCCHHHHHHHHHcCCCEEEEcCC--CCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCH
Confidence 665 4777665 478899999999999999999664 4432 2224568889999888731 26999999999999
Q ss_pred HHHHHHHHcCcceeeeccccccCccC
Q 020013 179 RGYVAALSLGAQGICLGTRFVASEES 204 (332)
Q Consensus 179 ~~v~~al~~GA~gV~~GT~fl~t~Es 204 (332)
.|+.++|++|||+|+||+.|+....+
T Consensus 416 ~Dv~kaLalGAdaV~iGr~~l~~~~~ 441 (511)
T 1kbi_A 416 TDVLKALCLGAKGVGLGRPFLYANSC 441 (511)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHHh
Confidence 99999999999999999999987644
No 42
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.57 E-value=3e-14 Score=124.60 Aligned_cols=168 Identities=18% Similarity=0.206 Sum_probs=121.3
Q ss_pred HHHHHHHHhCCCceeecCC-CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcHHHH
Q 020013 25 PELVAAVANAGGLGLLRAP-DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELV 103 (332)
Q Consensus 25 ~~la~avs~aGglG~i~~~-~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~~~i 103 (332)
.+.+.+..++| +..+... ...+++.+.+.++++++.+. +++++++++ +.++.+.+.|+++|+++.++.+.+.+
T Consensus 29 ~~~~~~~~~~G-~~~i~l~~~~~~~~~~~~~~~~l~~~~~-~~~v~v~v~----~~~~~a~~~gad~v~l~~~~~~~~~~ 102 (215)
T 1xi3_A 29 VESVREALEGG-ATAIQMRIKNAPTREMYEIGKTLRQLTR-EYDALFFVD----DRVDVALAVDADGVQLGPEDMPIEVA 102 (215)
T ss_dssp HHHHHHHHHTT-CSEEEECCCSCCHHHHHHHHHHHHHHHH-HTTCEEEEE----SCHHHHHHHTCSEEEECTTSCCHHHH
T ss_pred HHHHHHHHHCC-CCEEEECCCCCCHHHHHHHHHHHHHHHH-HcCCeEEEc----ChHHHHHHcCCCEEEECCccCCHHHH
Confidence 36666665555 4555331 12466666677777766543 356666764 35678888999999997655555666
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEec-CCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQG-REAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G-~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.+. .++.+...+.+.+++..+.+.|+|+|++.+ +..+++.++....+..++++++.. ++||+++|||. ++++.
T Consensus 103 ~~~~-~~~~~~v~~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~---~~pvia~GGI~-~~nv~ 177 (215)
T 1xi3_A 103 KEIA-PNLIIGASVYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV---KIPVVAIGGIN-KDNAR 177 (215)
T ss_dssp HHHC-TTSEEEEEESSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC---SSCEEEESSCC-TTTHH
T ss_pred HHhC-CCCEEEEecCCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC---CCCEEEECCcC-HHHHH
Confidence 6665 677777888999999989999999999976 344444322345678888888766 79999999995 99999
Q ss_pred HHHHcCcceeeeccccccCcc
Q 020013 183 AALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 183 ~al~~GA~gV~~GT~fl~t~E 203 (332)
+++.+||++|.+||+++.+++
T Consensus 178 ~~~~~Ga~gv~vgs~i~~~~d 198 (215)
T 1xi3_A 178 EVLKTGVDGIAVISAVMGAED 198 (215)
T ss_dssp HHHTTTCSEEEESHHHHTSSS
T ss_pred HHHHcCCCEEEEhHHHhCCCC
Confidence 999999999999999998753
No 43
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.56 E-value=4e-14 Score=132.40 Aligned_cols=192 Identities=16% Similarity=0.120 Sum_probs=124.9
Q ss_pred hhcC--CccceecCCCCCCCC-c-----HHHHHHHHhCCCceeecCCCCCC-HHH--HHHHHHHHHhh-cCCcEEEEeec
Q 020013 5 GMLG--FEYGIVQAPLGPDIS-G-----PELVAAVANAGGLGLLRAPDWEA-PDY--LRDLIRKTRSL-TERPFGVGVVL 72 (332)
Q Consensus 5 ~~l~--~~~Pii~apM~~g~s-~-----~~la~avs~aGglG~i~~~~~~~-~e~--~~~~i~~~r~~-~~~p~gvnl~~ 72 (332)
+++| ++.|++.+||++ .+ . ..++.++.++|..-.++. ..+ .+. .....+ ++.. .+.|+..|+-.
T Consensus 51 ~i~g~~l~~P~~iapm~g-~~~~~~~~~~~la~~a~~~G~~~~~~~--~~~~le~~~~~~~~q-l~~~~~d~pv~~~~~~ 126 (332)
T 1vcf_A 51 PFLGKTLKAPFLIGAMTG-GEENGERINLALAEAAEALGVGMMLGS--GRILLERPEALRSFR-VRKVAPKALLIANLGL 126 (332)
T ss_dssp EETTEEESSSEEECCCC----CCHHHHHHHHHHHHHHHTCEEEEEE--CHHHHHCTTTHHHHC-CTTTCSSSCEEEEEEG
T ss_pred EECCcccCCceEEecccc-CCcchhHHHHHHHHHHHHcCCCEEeCC--chhcccCCCccceEE-eeccCCCceeecccCh
Confidence 3455 678999999984 44 2 377888888874333322 111 110 011111 2322 46788777653
Q ss_pred CC---CC-HHHHHHHHhcCCcEEEEccC---------CCc----HHHHHHHHhCCCEEEEe-c---CCHHHHHHHHHcCC
Q 020013 73 AF---PH-NENIKAILSEKVAVLQVSWG---------EYS----EELVLEAHSAGVKVVPQ-V---GSFDEARKAVNAGV 131 (332)
Q Consensus 73 ~~---~~-~~~~~~~~~~~~~~I~~~~g---------~~~----~~~i~~~~~~g~~v~~~-v---~s~~~a~~a~~~g~ 131 (332)
.+ .. +...+.+...+++.+.++.. ... .+.++.+++.+++|+.+ + .++++++.+.+.|+
T Consensus 127 ~q~~~~~~~~~~~a~~~~~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~~~~Pv~vK~v~~g~~~e~a~~~~~~G~ 206 (332)
T 1vcf_A 127 AQLRRYGRDDLLRLVEMLEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLPLPFPVMVKEVGHGLSREAALALRDLPL 206 (332)
T ss_dssp GGGGTCCHHHHHHHHHHHTCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCSCSSCEEEECSSSCCCHHHHHHHTTSCC
T ss_pred hhhhccChHHHHHHHhhcCCCceeeccchHHHHhcCCCccHHHHHHHHHHHHcCCCCEEEEecCCCCCHHHHHHHHHcCC
Confidence 21 11 22233333346777655521 111 35667776667888888 7 78999999999999
Q ss_pred CEEEEecCCCCc-------c----------cCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeee
Q 020013 132 DAIIVQGREAGG-------H----------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 132 D~ivv~G~eaGG-------h----------~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~ 194 (332)
|+|++.|...+. + .....+++..++++++.++ ++|||++|||.+++++.++|++|||+|++
T Consensus 207 d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~--~ipvia~GGI~~~~d~~kal~~GAd~V~i 284 (332)
T 1vcf_A 207 AAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP--HLPLVASGGVYTGTDGAKALALGADLLAV 284 (332)
T ss_dssp SEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS--SSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred CEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC--CCeEEEECCCCCHHHHHHHHHhCCChHhh
Confidence 999998763211 1 1122366788899988774 69999999999999999999999999999
Q ss_pred ccccccCc
Q 020013 195 GTRFVASE 202 (332)
Q Consensus 195 GT~fl~t~ 202 (332)
|+.|+...
T Consensus 285 gr~~l~~~ 292 (332)
T 1vcf_A 285 ARPLLRPA 292 (332)
T ss_dssp CGGGHHHH
T ss_pred hHHHHHHH
Confidence 99999754
No 44
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.56 E-value=2.7e-13 Score=128.50 Aligned_cols=185 Identities=21% Similarity=0.211 Sum_probs=127.1
Q ss_pred hhcC--CccceecCCCCCCCCcH-------HHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCC
Q 020013 5 GMLG--FEYGIVQAPLGPDISGP-------ELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFP 75 (332)
Q Consensus 5 ~~l~--~~~Pii~apM~~g~s~~-------~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~ 75 (332)
+++| ++.|++.+||+ .++. .++.++.++|...+++.....+. +++......|..+++++..+
T Consensus 64 ~i~G~~~~~Pi~iAPmg--~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~i-------eev~~~~~~~~~~QLy~~~d 134 (370)
T 1gox_A 64 TILGFKISMPIMIAPTA--MQKMAHPEGEYATARAASAAGTIMTLSSWATSSV-------EEVASTGPGIRFFQLYVYKD 134 (370)
T ss_dssp EETTEEESSSEEECCCS--CGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSCH-------HHHHTTCCCCEEEEECCBSS
T ss_pred EECCcccCCceeEcccc--hhhhccchHHHHHHHHHHHcCCCeeccCCCCCCH-------HHHHhhcCCCceEEEecCCC
Confidence 3455 56899999995 3322 28888888887666654221222 22333323677777764432
Q ss_pred C---HHHHHHHHhcCCcEEEEccCCC----------------------------------------------------cH
Q 020013 76 H---NENIKAILSEKVAVLQVSWGEY----------------------------------------------------SE 100 (332)
Q Consensus 76 ~---~~~~~~~~~~~~~~I~~~~g~~----------------------------------------------------~~ 100 (332)
. .+.++.+.+.|++++.++.+.+ ..
T Consensus 135 ~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~ 214 (370)
T 1gox_A 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSW 214 (370)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCH
T ss_pred chHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchH
Confidence 1 2345566667888876654321 11
Q ss_pred HHHHHHHh-CCCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCcc-cCCCCchhhhHHHHHHHhCCCCCcEEeecCcCC
Q 020013 101 ELVLEAHS-AGVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGH-VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD 177 (332)
Q Consensus 101 ~~i~~~~~-~g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh-~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~ 177 (332)
+.++.+++ .+++++. .+.++++++.+.+.|+|+|++.+. ||. ..+..+++..++++++.++. ++|||++|||.+
T Consensus 215 ~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~--ggr~~~~~~~~~~~l~~v~~~~~~-~ipvia~GGI~~ 291 (370)
T 1gox_A 215 KDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNH--GARQLDYVPATIMALEEVVKAAQG-RIPVFLDGGVRR 291 (370)
T ss_dssp HHHHHHHHHCCSCEEEECCCSHHHHHHHHHTTCSEEEECCG--GGTSSTTCCCHHHHHHHHHHHTTT-SSCEEEESSCCS
T ss_pred HHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEECCC--CCccCCCcccHHHHHHHHHHHhCC-CCEEEEECCCCC
Confidence 23444444 5778776 678999999999999999999654 222 12234678889999887743 699999999999
Q ss_pred HHHHHHHHHcCcceeeeccccccC
Q 020013 178 ARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 178 ~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
++|+.+++++|||+|++|+.|+..
T Consensus 292 ~~D~~k~l~~GAdaV~iGr~~l~~ 315 (370)
T 1gox_A 292 GTDVFKALALGAAGVFIGRPVVFS 315 (370)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHH
T ss_pred HHHHHHHHHcCCCEEeecHHHHHH
Confidence 999999999999999999999864
No 45
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.55 E-value=6.4e-14 Score=123.45 Aligned_cols=171 Identities=19% Similarity=0.203 Sum_probs=123.9
Q ss_pred CCCceeecCC-CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCE
Q 020013 34 AGGLGLLRAP-DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVK 112 (332)
Q Consensus 34 aGglG~i~~~-~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~ 112 (332)
.+|+.++... ...+++++.+.++++++.+. ++. +++++ +.++.+.+.++|.|+++....+.+.++.+.. ++.
T Consensus 40 ~~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~-~~~-~l~v~----~~~~~a~~~gad~v~l~~~~~~~~~~~~~~~-~~~ 112 (221)
T 1yad_A 40 QNEVDFIHIRERSKSAADILKLLDLIFEGGI-DKR-KLVMN----GRVDIALFSTIHRVQLPSGSFSPKQIRARFP-HLH 112 (221)
T ss_dssp GGGCSEEEECCTTSCHHHHHHHHHHHHHTTC-CGG-GEEEE----SCHHHHHTTTCCEEEECTTSCCHHHHHHHCT-TCE
T ss_pred HCCCCEEEEccCCCCHHHHHHHHHHHHHhcC-cCC-eEEEe----ChHHHHHHcCCCEEEeCCCccCHHHHHHHCC-CCE
Confidence 3566677531 12467778888888887643 444 66664 3568889999999999976556666666654 888
Q ss_pred EEEecCCHHHHHHHHHcCCCEEEEecCCCC-cccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcce
Q 020013 113 VVPQVGSFDEARKAVNAGVDAIIVQGREAG-GHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQG 191 (332)
Q Consensus 113 v~~~v~s~~~a~~a~~~g~D~ivv~G~eaG-Gh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~g 191 (332)
+...+++.++++.+.+.|+|+|++...-.+ .+.+.....+.+++++++.. ++||+++||| +++++.+++.+||++
T Consensus 113 ig~sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~---~~pvia~GGI-~~~nv~~~~~~Ga~g 188 (221)
T 1yad_A 113 IGRSVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI---SIPVIAIGGM-TPDRLRDVKQAGADG 188 (221)
T ss_dssp EEEEECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC---CSCEEEESSC-CGGGHHHHHHTTCSE
T ss_pred EEEEcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC---CCCEEEECCC-CHHHHHHHHHcCCCE
Confidence 888999999999999999999998442111 11111224577888887766 7999999999 999999999999999
Q ss_pred eeeccccccCcc-CCCCHHHHHHHh
Q 020013 192 ICLGTRFVASEE-SYAHPEYKRKLV 215 (332)
Q Consensus 192 V~~GT~fl~t~E-s~~~~~~k~~~~ 215 (332)
|.+||+++.+++ ......+++.+.
T Consensus 189 v~vgs~i~~~~d~~~~~~~~~~~~~ 213 (221)
T 1yad_A 189 IAVMSGIFSSAEPLEAARRYSRKLK 213 (221)
T ss_dssp EEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred EEEhHHhhCCCCHHHHHHHHHHHHH
Confidence 999999998766 334455555554
No 46
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=99.53 E-value=3.3e-13 Score=117.32 Aligned_cols=169 Identities=17% Similarity=0.191 Sum_probs=125.4
Q ss_pred CCCcHHHHHHHHhCC--Cceeec---CCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc
Q 020013 21 DISGPELVAAVANAG--GLGLLR---APDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW 95 (332)
Q Consensus 21 g~s~~~la~avs~aG--glG~i~---~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~ 95 (332)
|+++++.+.++.++| .+||+. ++++.+++..+++.+.++ ..+..|+++++.+.++..+.+.+.+.|+|++|
T Consensus 8 Git~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~---~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH- 83 (205)
T 1nsj_A 8 GITNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELP---PFVFRVGVFVNEEPEKILDVASYVQLNAVQLH- 83 (205)
T ss_dssp CCCSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSC---SSSEEEEEESSCCHHHHHHHHHHHTCSEEEEC-
T ss_pred CCCcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCC---CCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC-
Confidence 689999999999988 599995 345667887776655443 34567888998876666777788899999999
Q ss_pred CCCcHHHHHHHHhCCCEEEEe--cCCHHHHHHHHHcCCCEEEEecCC--CCcccCCCCchhhhHHHHHHHhCCCCCcEEe
Q 020013 96 GEYSEELVLEAHSAGVKVVPQ--VGSFDEARKAVNAGVDAIIVQGRE--AGGHVIGQDGLISLLPMVVDLIGDRDIPIIA 171 (332)
Q Consensus 96 g~~~~~~i~~~~~~g~~v~~~--v~s~~~a~~a~~~g~D~ivv~G~e--aGGh~~~~~~~~~ll~~i~~~~~~~~iPvia 171 (332)
|++++++++.++. ++++|.. +.+..+...+....+|+++++... .||. |....|.+++.+. .. +.|++.
T Consensus 84 G~e~~~~~~~l~~-~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGt--G~~fdw~~l~~~~-~~---~~p~~L 156 (205)
T 1nsj_A 84 GEEPIELCRKIAE-RILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGS--GKTFDWSLILPYR-DR---FRYLVL 156 (205)
T ss_dssp SCCCHHHHHHHHT-TSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSC--CSCCCGGGTGGGG-GG---SSCEEE
T ss_pred CCCCHHHHHHHhc-CCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCC--CCccCHHHHHhhh-cC---CCcEEE
Confidence 6667888888863 4777754 455555544444459999998653 2443 4445677776532 12 579999
Q ss_pred ecCcCCHHHHHHHHH-cCcceeeeccccccC
Q 020013 172 AGGIVDARGYVAALS-LGAQGICLGTRFVAS 201 (332)
Q Consensus 172 aGGI~~~~~v~~al~-~GA~gV~~GT~fl~t 201 (332)
+||| +++|+.+++. .++.||-+.|.+=.+
T Consensus 157 AGGL-~peNV~~ai~~~~p~gVDvsSGvE~~ 186 (205)
T 1nsj_A 157 SGGL-NPENVRSAIDVVRPFAVDVSSGVEAF 186 (205)
T ss_dssp ESSC-CTTTHHHHHHHHCCSEEEESGGGEEE
T ss_pred ECCC-CHHHHHHHHHhcCCCEEEECCceecC
Confidence 9999 8999999887 699999999987643
No 47
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=99.52 E-value=1.4e-13 Score=121.35 Aligned_cols=171 Identities=23% Similarity=0.351 Sum_probs=129.6
Q ss_pred cceecCCCCCCCCcHHHHHHHHhC---CCceeecCCCCCCHHHHHHHHHHHHhh-cCCcEEEEeecCCCCHHHHHHHHhc
Q 020013 11 YGIVQAPLGPDISGPELVAAVANA---GGLGLLRAPDWEAPDYLRDLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSE 86 (332)
Q Consensus 11 ~Pii~apM~~g~s~~~la~avs~a---GglG~i~~~~~~~~e~~~~~i~~~r~~-~~~p~gvnl~~~~~~~~~~~~~~~~ 86 (332)
.||| |.- ...+++.+..++++ ||+..+.. .+.+++. .+.|+++++. .+.-+|.+.++ +.++++.++++
T Consensus 34 ~~vv--~Vi-r~~~~~~a~~~a~al~~gGi~~iEv-t~~t~~a-~e~I~~l~~~~~~~~iGaGTVl---t~~~a~~Ai~A 105 (232)
T 4e38_A 34 LKVI--PVI-AIDNAEDIIPLGKVLAENGLPAAEI-TFRSDAA-VEAIRLLRQAQPEMLIGAGTIL---NGEQALAAKEA 105 (232)
T ss_dssp HCEE--EEE-CCSSGGGHHHHHHHHHHTTCCEEEE-ETTSTTH-HHHHHHHHHHCTTCEEEEECCC---SHHHHHHHHHH
T ss_pred CCEE--EEE-EcCCHHHHHHHHHHHHHCCCCEEEE-eCCCCCH-HHHHHHHHHhCCCCEEeECCcC---CHHHHHHHHHc
Confidence 3555 543 35566555555543 88888876 3566654 4566666654 34456777554 37889999999
Q ss_pred CCcEEEEccCCCcHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCC
Q 020013 87 KVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRD 166 (332)
Q Consensus 87 ~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~ 166 (332)
|+++|... + ..+++++.+++.|+++++.+.|+.|+..|.+.|+|+|.+...+. .....+++.++..++ +
T Consensus 106 GA~fIvsP-~-~~~~vi~~~~~~gi~~ipGv~TptEi~~A~~~Gad~vK~FPa~~-------~gG~~~lkal~~p~p--~ 174 (232)
T 4e38_A 106 GATFVVSP-G-FNPNTVRACQEIGIDIVPGVNNPSTVEAALEMGLTTLKFFPAEA-------SGGISMVKSLVGPYG--D 174 (232)
T ss_dssp TCSEEECS-S-CCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEECSTTT-------TTHHHHHHHHHTTCT--T
T ss_pred CCCEEEeC-C-CCHHHHHHHHHcCCCEEcCCCCHHHHHHHHHcCCCEEEECcCcc-------ccCHHHHHHHHHHhc--C
Confidence 99999887 3 46789999999999999999999999999999999999844321 112467788777653 7
Q ss_pred CcEEeecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 167 IPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 167 iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
+|+++.||| +++|+.+++++|+.++++||.+...
T Consensus 175 ip~~ptGGI-~~~n~~~~l~aGa~~~vgGs~l~~~ 208 (232)
T 4e38_A 175 IRLMPTGGI-TPSNIDNYLAIPQVLACGGTWMVDK 208 (232)
T ss_dssp CEEEEBSSC-CTTTHHHHHTSTTBCCEEECGGGCH
T ss_pred CCeeeEcCC-CHHHHHHHHHCCCeEEEECchhcCh
Confidence 999999999 7999999999999999999887643
No 48
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.51 E-value=3.5e-13 Score=124.81 Aligned_cols=188 Identities=16% Similarity=0.117 Sum_probs=125.6
Q ss_pred CccceecCCCCCCCCcHHHHHHHHhCCCceeecCCC--------CCC--------------------HHHHHHHHHHHHh
Q 020013 9 FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPD--------WEA--------------------PDYLRDLIRKTRS 60 (332)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~--------~~~--------------------~e~~~~~i~~~r~ 60 (332)
++.||+.++.. .-.+.++.....+.| +|++..+. ... .+.+.+.+...++
T Consensus 11 l~npv~~Aag~-~~~~~~~~~~~~~~G-~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~ 88 (311)
T 1jub_A 11 FANPFMNASGV-HCMTIEDLEELKASQ-AGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQK 88 (311)
T ss_dssp ESSSEEECTTS-SCSSHHHHHHHHHSS-CSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHH
T ss_pred cCCCcEECCCC-CCCCHHHHHHHHHCC-CCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHH
Confidence 67899999742 123788887776654 56664321 001 3444444544443
Q ss_pred hc--CCcEEEEeecCCC--CHHHHHHHHhcCCc-EEEEccCCC-----------c---HHHHHHHHhC-CCEEEEecC--
Q 020013 61 LT--ERPFGVGVVLAFP--HNENIKAILSEKVA-VLQVSWGEY-----------S---EELVLEAHSA-GVKVVPQVG-- 118 (332)
Q Consensus 61 ~~--~~p~gvnl~~~~~--~~~~~~~~~~~~~~-~I~~~~g~~-----------~---~~~i~~~~~~-g~~v~~~v~-- 118 (332)
.. +.|+++|+..... ..+.++.+.+.++| +|.+++++| + .++++.+++. +++++.++.
T Consensus 89 ~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~ 168 (311)
T 1jub_A 89 ENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY 168 (311)
T ss_dssp HTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred hcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 34 7899999986432 12344556678899 999987642 2 2455666654 678876654
Q ss_pred -CHHH----HHHHHHcCCCEEEEecCC--------------------CCcccCCCC---chhhhHHHHHHHhCCCCCcEE
Q 020013 119 -SFDE----ARKAVNAGVDAIIVQGRE--------------------AGGHVIGQD---GLISLLPMVVDLIGDRDIPII 170 (332)
Q Consensus 119 -s~~~----a~~a~~~g~D~ivv~G~e--------------------aGGh~~~~~---~~~~ll~~i~~~~~~~~iPvi 170 (332)
+.++ ++.+.++|+|+|++.+.. .||+. +.. ..+..++++++.++. ++|||
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~s-g~~~~~~~~~~i~~v~~~~~~-~ipvi 246 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIG-GAYIKPTALANVRAFYTRLKP-EIQII 246 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEE-SGGGHHHHHHHHHHHHTTSCT-TSEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccc-cccccHHHHHHHHHHHHhcCC-CCCEE
Confidence 3333 567778899999987642 23443 221 236677777776532 69999
Q ss_pred eecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 171 AAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 171 aaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
+.|||.+++++.+++.+|||+|++||+|+.
T Consensus 247 ~~GGI~~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 247 GTGGIETGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp EESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEchHHHh
Confidence 999999999999999999999999999997
No 49
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.51 E-value=4.8e-14 Score=122.73 Aligned_cols=178 Identities=19% Similarity=0.240 Sum_probs=126.4
Q ss_pred CcchhhcCCccceecCCCCCCCCcHHHHHHHH---hCCCceeecCCCCCCHHHHHHHHHHHHhhc--CCcEEEEeecCCC
Q 020013 1 MGWRGMLGFEYGIVQAPLGPDISGPELVAAVA---NAGGLGLLRAPDWEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFP 75 (332)
Q Consensus 1 ~~~~~~l~~~~Pii~apM~~g~s~~~la~avs---~aGglG~i~~~~~~~~e~~~~~i~~~r~~~--~~p~gvnl~~~~~ 75 (332)
|.+.+.|. +.|+| |.-. ..+++.+..+. ..+|+.++.. .+.++.. .+.++++|+.. +.+++++...
T Consensus 1 ~~~~~~~~-~~~~i--~~~~-~~~~~~~~~~~~~~~~~G~~~iev-~~~~~~~-~~~i~~ir~~~~~~~~ig~~~v~--- 71 (205)
T 1wa3_A 1 MKMEELFK-KHKIV--AVLR-ANSVEEAKEKALAVFEGGVHLIEI-TFTVPDA-DTVIKELSFLKEKGAIIGAGTVT--- 71 (205)
T ss_dssp -CHHHHHH-HHCEE--EEEC-CSSHHHHHHHHHHHHHTTCCEEEE-ETTSTTH-HHHHHHTHHHHHTTCEEEEESCC---
T ss_pred CcHHHHHh-hCCEE--EEEe-cCCHHHHHHHHHHHHHCCCCEEEE-eCCChhH-HHHHHHHHHHCCCCcEEEecccC---
Confidence 56666665 56777 5432 33444333222 3466777743 2233332 34567777653 4667776433
Q ss_pred CHHHHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhH
Q 020013 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLL 155 (332)
Q Consensus 76 ~~~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll 155 (332)
+.+.++.+.+.|+|+| ++.+ .+.++++.+++.|+++++.+.|..++..+.+.|+|+|.+...+. .....+
T Consensus 72 ~~~~~~~a~~~Gad~i-v~~~-~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~--------~g~~~~ 141 (205)
T 1wa3_A 72 SVEQCRKAVESGAEFI-VSPH-LDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEV--------VGPQFV 141 (205)
T ss_dssp SHHHHHHHHHHTCSEE-ECSS-CCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHH--------HHHHHH
T ss_pred CHHHHHHHHHcCCCEE-EcCC-CCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccc--------cCHHHH
Confidence 2456788888999999 6644 46788999999999999999999999999999999998743211 124566
Q ss_pred HHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 156 PMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 156 ~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
+++++.++ ++||++.||| +.+++.+++.+||++|++||.++.
T Consensus 142 ~~l~~~~~--~~pvia~GGI-~~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 142 KAMKGPFP--NVKFVPTGGV-NLDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp HHHHTTCT--TCEEEEBSSC-CTTTHHHHHHHTCSCEEECHHHHC
T ss_pred HHHHHhCC--CCcEEEcCCC-CHHHHHHHHHCCCCEEEECccccC
Confidence 77766543 6999999999 689999999999999999999987
No 50
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=99.50 E-value=2.4e-13 Score=121.27 Aligned_cols=171 Identities=15% Similarity=0.172 Sum_probs=117.4
Q ss_pred HHHHHHHHhCCCceeecCCCC----------CCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc
Q 020013 25 PELVAAVANAGGLGLLRAPDW----------EAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS 94 (332)
Q Consensus 25 ~~la~avs~aGglG~i~~~~~----------~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~ 94 (332)
.+.+.++.+ ||+.++..... .+.+++.+..+++++++. .+++-++++ +.++.+.+.++|.|++.
T Consensus 46 ~~~~~~al~-~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~-~~~~~liIn----d~~~lA~~~gAdGVHLg 119 (243)
T 3o63_A 46 AQFAEAALA-GGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAH-RYGALFAVN----DRADIARAAGADVLHLG 119 (243)
T ss_dssp HHHHHHHHH-TTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHH-HTTCEEEEE----SCHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHH-CCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHH-hhCCEEEEe----CHHHHHHHhCCCEEEec
Confidence 444444444 56777765211 224556666666666542 134445553 34567888899999998
Q ss_pred cCCCcHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecC-CCCcccCCCCchhhhHHHHHHHhCCCCCcEEeec
Q 020013 95 WGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGR-EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAG 173 (332)
Q Consensus 95 ~g~~~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~-eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaG 173 (332)
..+.+...++.+...+..+...++|++|++.+.+.|+|+|.+... ....+.+.....+..+.++.+... .++||++.|
T Consensus 120 ~~dl~~~~~r~~~~~~~~iG~S~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~-~~iPvvAiG 198 (243)
T 3o63_A 120 QRDLPVNVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGG-DDKPWFAIG 198 (243)
T ss_dssp TTSSCHHHHHHHSCTTCEEEEEECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC----CCCEEEES
T ss_pred CCcCCHHHHHHhhCCCCEEEEeCCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhcc-CCCCEEEec
Confidence 766666666766666788889999999999999999999998442 122222111234667777765411 179999999
Q ss_pred CcCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 174 GIVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 174 GI~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
|| +++++.+++.+||+||.+||+|+.++.
T Consensus 199 GI-~~~ni~~~~~aGa~gvav~sai~~a~d 227 (243)
T 3o63_A 199 GI-NAQRLPAVLDAGARRIVVVRAITSADD 227 (243)
T ss_dssp SC-CTTTHHHHHHTTCCCEEESHHHHTCSS
T ss_pred CC-CHHHHHHHHHcCCCEEEEeHHHhCCCC
Confidence 99 899999999999999999999997654
No 51
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=99.50 E-value=3.1e-13 Score=117.24 Aligned_cols=167 Identities=19% Similarity=0.206 Sum_probs=122.9
Q ss_pred CCCcHHHHHHHHhCC--Cceeec---CCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc
Q 020013 21 DISGPELVAAVANAG--GLGLLR---APDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW 95 (332)
Q Consensus 21 g~s~~~la~avs~aG--glG~i~---~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~ 95 (332)
|+++++.+.++.++| .+||+. ++++.+++..+++.+.++ ..+..|+++++.+.++..+.+.+.+.|+|++|
T Consensus 7 Git~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~---~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH- 82 (203)
T 1v5x_A 7 GITRLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALG---PFVVRVGVFRDQPPEEVLRLMEEARLQVAQLH- 82 (203)
T ss_dssp CCCCHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSC---SSSEEEEEESSCCHHHHHHHHHHTTCSEEEEC-
T ss_pred CCCcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCC---CCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC-
Confidence 689999999999988 599995 345667887776655443 34567888998876667777788899999999
Q ss_pred CCCcHHHHHHHHhCCCEEEEec--CCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeec
Q 020013 96 GEYSEELVLEAHSAGVKVVPQV--GSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAG 173 (332)
Q Consensus 96 g~~~~~~i~~~~~~g~~v~~~v--~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaG 173 (332)
|++++++++.++ .++++|..+ .+..+. .+....+|+++++... ||. |....|.+++.+.. . +.|++.+|
T Consensus 83 G~e~~~~~~~l~-~~~~vika~~v~~~~~l-~~~~~~~d~~LlD~~~-gGt--G~~fdW~~l~~~~~-~---~~p~~LAG 153 (203)
T 1v5x_A 83 GEEPPEWAEAVG-RFYPVIKAFPLEGPARP-EWADYPAQALLLDGKR-PGS--GEAYPRAWAKPLLA-T---GRRVILAG 153 (203)
T ss_dssp SCCCHHHHHHHT-TTSCEEEEEECSSSCCG-GGGGSSCSEEEEECSS-TTS--CCCCCGGGGHHHHH-T---TSCEEECS
T ss_pred CCCCHHHHHHhc-cCCCEEEEEEcCChHhh-hhhhcCCCEEEEcCCC-CCC--CCccCHHHHHhhhc-c---CCcEEEEC
Confidence 666788888884 367777543 332222 2333348999998654 443 44456888876322 2 58999999
Q ss_pred CcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 174 GIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 174 GI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
|| +++|+.+++..++.||-+.|.+=.+
T Consensus 154 GL-~peNV~~ai~~~p~gVDvsSGvE~~ 180 (203)
T 1v5x_A 154 GI-APENLEEVLALRPYALDLASGVEEA 180 (203)
T ss_dssp SC-CSTTHHHHHHHCCSEEEESGGGEEE
T ss_pred CC-CHHHHHHHHhcCCCEEEeCCceecC
Confidence 99 8999999887799999999987643
No 52
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.50 E-value=1.2e-13 Score=129.23 Aligned_cols=187 Identities=14% Similarity=0.213 Sum_probs=123.3
Q ss_pred CccceecCCCCCCCCcHHHHHHHHhCCCceeecCCC--------CC-------------------CHHHHHHHHHHHHhh
Q 020013 9 FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPD--------WE-------------------APDYLRDLIRKTRSL 61 (332)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~--------~~-------------------~~e~~~~~i~~~r~~ 61 (332)
++.||+.+++. ..+.++..+.++.| +|++..+. .. +.+.++..++.+++.
T Consensus 54 l~npi~~aag~--~~~~~~~~~~a~~G-~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~ 130 (336)
T 1f76_A 54 FKNPLGLAAGL--DKDGECIDALGAMG-FGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKA 130 (336)
T ss_dssp ESSSEEECTTS--STTCCCHHHHHHTT-CSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHC
T ss_pred cCCCcEeCccc--CCcHHHHHHHHHcC-ccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhc
Confidence 56899999652 34556777776654 66552110 00 001124444555443
Q ss_pred -cCCcEEEEeecCCC------CHHHHHHHH--hcCCcEEEEccCCCc-------------HHHHHHHHhC----------
Q 020013 62 -TERPFGVGVVLAFP------HNENIKAIL--SEKVAVLQVSWGEYS-------------EELVLEAHSA---------- 109 (332)
Q Consensus 62 -~~~p~gvnl~~~~~------~~~~~~~~~--~~~~~~I~~~~g~~~-------------~~~i~~~~~~---------- 109 (332)
.+.|+++|+..+.. .+++.+.+. ..++|+|.+++++|. .++++.+++.
T Consensus 131 ~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~ 210 (336)
T 1f76_A 131 HYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHK 210 (336)
T ss_dssp CCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ccCCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccc
Confidence 24689999977541 133333332 247999999987643 2566666543
Q ss_pred CCEEEEecC---C----HHHHHHHHHcCCCEEEEecC--------------CCCcccCCC---CchhhhHHHHHHHhCCC
Q 020013 110 GVKVVPQVG---S----FDEARKAVNAGVDAIIVQGR--------------EAGGHVIGQ---DGLISLLPMVVDLIGDR 165 (332)
Q Consensus 110 g~~v~~~v~---s----~~~a~~a~~~g~D~ivv~G~--------------eaGGh~~~~---~~~~~ll~~i~~~~~~~ 165 (332)
+++|+.+++ + .+.++.+.+.|+|+|++.|. +.||+. +. ...+.+++++++.++.
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~-g~~~~~~~~~~i~~i~~~~~~- 288 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLS-GRPLQLKSTEIIRRLSLELNG- 288 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEE-EGGGHHHHHHHHHHHHHHHTT-
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcC-CchhHHHHHHHHHHHHHHhCC-
Confidence 688887765 2 23367788999999999764 234443 21 1235678888887742
Q ss_pred CCcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 166 DIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 166 ~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
++|||+.|||.+++++.+++++|||+|+|||+|+.
T Consensus 289 ~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 289 RLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 69999999999999999999999999999999987
No 53
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=99.49 E-value=5e-13 Score=116.17 Aligned_cols=179 Identities=21% Similarity=0.241 Sum_probs=134.0
Q ss_pred Ccchhh-cCCccceecCCCCCCCCcHHHHHHHHhC---CCceeecCCCCCCHHHHHHHHHHHHhh-cCCcEEEEeecCCC
Q 020013 1 MGWRGM-LGFEYGIVQAPLGPDISGPELVAAVANA---GGLGLLRAPDWEAPDYLRDLIRKTRSL-TERPFGVGVVLAFP 75 (332)
Q Consensus 1 ~~~~~~-l~~~~Pii~apM~~g~s~~~la~avs~a---GglG~i~~~~~~~~e~~~~~i~~~r~~-~~~p~gvnl~~~~~ 75 (332)
|+..+. +--+.||| |.- ...+++.+..++++ ||+..+.. .+.+++. .+.|+++++. .+..+|.+.++
T Consensus 2 m~~~~~~~~~~~~vi--~Vi-r~~~~~~a~~~a~al~~gGi~~iEv-t~~t~~a-~~~I~~l~~~~p~~~IGAGTVl--- 73 (217)
T 3lab_A 2 MTQLDTWLANTKPLI--PVI-VIDDLVHAIPMAKALVAGGVHLLEV-TLRTEAG-LAAISAIKKAVPEAIVGAGTVC--- 73 (217)
T ss_dssp CCHHHHHHTTSCSEE--EEE-CCSCGGGHHHHHHHHHHTTCCEEEE-ETTSTTH-HHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCchHHHHHhhCCEE--EEE-EcCCHHHHHHHHHHHHHcCCCEEEE-eCCCccH-HHHHHHHHHHCCCCeEeecccc---
Confidence 444422 33356777 664 45666666666654 88998876 3566654 3556666654 34557888666
Q ss_pred CHHHHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCC------EEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCC
Q 020013 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGV------KVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQD 149 (332)
Q Consensus 76 ~~~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~------~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~ 149 (332)
+.+.++.+.++|+++|... + ..+++++.+++.++ ++++.+.|+.|+..+.+.|+|+|.+...+. .
T Consensus 74 t~~~a~~ai~AGA~fivsP-~-~~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~vK~FPa~~-------~ 144 (217)
T 3lab_A 74 TADDFQKAIDAGAQFIVSP-G-LTPELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQAGITQLKCFPASA-------I 144 (217)
T ss_dssp SHHHHHHHHHHTCSEEEES-S-CCHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHTTCCEEEETTTTT-------T
T ss_pred CHHHHHHHHHcCCCEEEeC-C-CcHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHcCCCEEEECcccc-------c
Confidence 3688999999999999887 4 36789999999999 999999999999999999999998843221 1
Q ss_pred chhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 150 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 150 ~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
....+++.++..++ ++|+++.||| +++|+.+++++|+..++.||.+.
T Consensus 145 gG~~~lkal~~p~p--~i~~~ptGGI-~~~N~~~~l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 145 GGAKLLKAWSGPFP--DIQFCPTGGI-SKDNYKEYLGLPNVICAGGSWLT 191 (217)
T ss_dssp THHHHHHHHHTTCT--TCEEEEBSSC-CTTTHHHHHHSTTBCCEEESGGG
T ss_pred cCHHHHHHHHhhhc--CceEEEeCCC-CHHHHHHHHHCCCEEEEEChhhc
Confidence 12467777777664 6999999999 79999999999998887776654
No 54
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.48 E-value=2.6e-12 Score=122.09 Aligned_cols=96 Identities=22% Similarity=0.303 Sum_probs=78.4
Q ss_pred HHHHHHHh-CCCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCccc-CCCCchhhhHHHHHHHhCCCCCcEEeecCcCC
Q 020013 101 ELVLEAHS-AGVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHV-IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD 177 (332)
Q Consensus 101 ~~i~~~~~-~g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~-~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~ 177 (332)
+.++.+++ .+++++ ..+.++++++.+.++|+|+|++.|. ||.. ++..+++..++++++.+ ++|||++|||.+
T Consensus 215 ~~i~~i~~~~~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~--gg~~~d~~~~~~~~l~~v~~~~---~~pVia~GGI~~ 289 (380)
T 1p4c_A 215 EALRWLRDLWPHKLLVKGLLSAEDADRCIAEGADGVILSNH--GGRQLDCAISPMEVLAQSVAKT---GKPVLIDSGFRR 289 (380)
T ss_dssp HHHHHHHHHCCSEEEEEEECCHHHHHHHHHTTCSEEEECCG--GGTSCTTCCCGGGTHHHHHHHH---CSCEEECSSCCS
T ss_pred HHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEcCC--CCCcCCCCcCHHHHHHHHHHHc---CCeEEEECCCCC
Confidence 45666655 577877 4578999999999999999999543 3322 12245788999999988 679999999999
Q ss_pred HHHHHHHHHcCcceeeeccccccC
Q 020013 178 ARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 178 ~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
++|+.+++++|||+|++|+.|+..
T Consensus 290 ~~dv~kal~~GAdaV~iGr~~l~~ 313 (380)
T 1p4c_A 290 GSDIVKALALGAEAVLLGRATLYG 313 (380)
T ss_dssp HHHHHHHHHTTCSCEEESHHHHHH
T ss_pred HHHHHHHHHhCCcHhhehHHHHHH
Confidence 999999999999999999999854
No 55
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.48 E-value=2.7e-13 Score=125.67 Aligned_cols=187 Identities=12% Similarity=0.116 Sum_probs=124.7
Q ss_pred CccceecCCCCCCCCcHHHHHHHHhCCCceeecCCC--------------------------CCC--HHHHHHHHHHHHh
Q 020013 9 FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPD--------------------------WEA--PDYLRDLIRKTRS 60 (332)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~--------------------------~~~--~e~~~~~i~~~r~ 60 (332)
++.||+.+++.. -.+.+......+. |+|++..+. +.+ .+.+.+.++..+.
T Consensus 13 l~nPi~~Aag~~-~~~~~~~~~~~~~-G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~ 90 (314)
T 2e6f_A 13 FANPFMNAAGVL-CSTEEDLRCMTAS-SSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHD 90 (314)
T ss_dssp ESSSEEECTTSS-CSSHHHHHHHHHS-SCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCC
T ss_pred cCCCcEECCCCC-CCCHHHHHHHHHC-CCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhh
Confidence 678999998641 2367777776554 456543211 111 2333333333323
Q ss_pred hcCCcEEEEeecCCCC--HHHHHHHHhcCCc---EEEEccCCCc--------------HHHHHHHHhC-CCEEEEecC--
Q 020013 61 LTERPFGVGVVLAFPH--NENIKAILSEKVA---VLQVSWGEYS--------------EELVLEAHSA-GVKVVPQVG-- 118 (332)
Q Consensus 61 ~~~~p~gvnl~~~~~~--~~~~~~~~~~~~~---~I~~~~g~~~--------------~~~i~~~~~~-g~~v~~~v~-- 118 (332)
..+.|+.+|+...... .+.++.+.+.++| +|.+++++|. .++++.+++. +++++.++.
T Consensus 91 ~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~ 170 (314)
T 2e6f_A 91 YSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY 170 (314)
T ss_dssp TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC
T ss_pred cCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 3578999999864421 2334455667889 9999876431 2456666654 778876654
Q ss_pred -CHHH----HHHHHHcC-CCEEEEecCC--------------------CCcccCCC---CchhhhHHHHHHHhCCCCCcE
Q 020013 119 -SFDE----ARKAVNAG-VDAIIVQGRE--------------------AGGHVIGQ---DGLISLLPMVVDLIGDRDIPI 169 (332)
Q Consensus 119 -s~~~----a~~a~~~g-~D~ivv~G~e--------------------aGGh~~~~---~~~~~ll~~i~~~~~~~~iPv 169 (332)
+.++ ++.+.++| +|+|++.+.. .||+. +. ...+..++++++.++ ++||
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~s-g~~~~p~~~~~i~~v~~~~~--~ipv 247 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLG-GKYILPTALANVNAFYRRCP--DKLV 247 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEE-SGGGHHHHHHHHHHHHHHCT--TSEE
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccC-cccccHHHHHHHHHHHHhcC--CCCE
Confidence 4445 66778999 9999986632 23443 22 123677888887762 7999
Q ss_pred EeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 170 IAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 170 iaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
|+.|||.+++++.+++.+|||+|++||+|+.
T Consensus 248 i~~GGI~~~~da~~~l~~GAd~V~ig~~~l~ 278 (314)
T 2e6f_A 248 FGCGGVYSGEDAFLHILAGASMVQVGTALQE 278 (314)
T ss_dssp EEESSCCSHHHHHHHHHHTCSSEEECHHHHH
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEchhhHh
Confidence 9999999999999999999999999999997
No 56
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=99.47 E-value=2.5e-13 Score=124.24 Aligned_cols=189 Identities=18% Similarity=0.217 Sum_probs=135.0
Q ss_pred CCcHHHHHHHHhCCC--ceeec--------CC---CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCC
Q 020013 22 ISGPELVAAVANAGG--LGLLR--------AP---DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKV 88 (332)
Q Consensus 22 ~s~~~la~avs~aGg--lG~i~--------~~---~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~ 88 (332)
+.++++|..-.++|. +-++. .+ +..+++ .++++++..+.|+-+...... .+.++.+.+.|+
T Consensus 28 ~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~----~i~~i~~~v~iPvl~k~~i~~--ide~qil~aaGA 101 (297)
T 4adt_A 28 VKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPL----KIEEIRKCISINVLAKVRIGH--FVEAQILEELKV 101 (297)
T ss_dssp ESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHH----HHHHHHTTCCSEEEEEEETTC--HHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHH----HHHHHHHhcCCCEEEeccCCc--HHHHHHHHHcCC
Confidence 578899888878886 44441 10 011343 467777777889876543322 456777888999
Q ss_pred cEEEEccCCCcHHHHHHHHh--CCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcc-------c--------------
Q 020013 89 AVLQVSWGEYSEELVLEAHS--AGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH-------V-------------- 145 (332)
Q Consensus 89 ~~I~~~~g~~~~~~i~~~~~--~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh-------~-------------- 145 (332)
|+|..+.+..+.++++.+++ .+..+++.+++.++++++.+.|+|+|.++|....|. .
T Consensus 102 D~Id~s~~~~~~~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~ 181 (297)
T 4adt_A 102 DMLDESEVLTMADEYNHINKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLD 181 (297)
T ss_dssp SEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CEEEcCCCCCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhcccc
Confidence 99955544445567777766 578899999999999999999999999998733231 0
Q ss_pred -CC-------CCchhhhHHHHHHHhCCCCCcEE--eecCcCCHHHHHHHHHcCcceeeeccccccCccC-CCCHHHHHHH
Q 020013 146 -IG-------QDGLISLLPMVVDLIGDRDIPII--AAGGIVDARGYVAALSLGAQGICLGTRFVASEES-YAHPEYKRKL 214 (332)
Q Consensus 146 -~~-------~~~~~~ll~~i~~~~~~~~iPvi--aaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es-~~~~~~k~~~ 214 (332)
.+ ...++.+++++.+.+ ++||+ +.|||++++++.+++.+|||+|++||+|+.++.. .....+++.+
T Consensus 182 ~d~L~t~~~~~~~~~~ll~~i~~~~---~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai 258 (297)
T 4adt_A 182 ESEVYNFAKKLRAPIDLILLTRKLK---RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAV 258 (297)
T ss_dssp TTTHHHHHHHHTCCHHHHHHHHHHT---SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred ccccccccccCCCCHHHHHHHHHhc---CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHH
Confidence 01 023477888888876 67876 9999999999999999999999999999987532 1234455555
Q ss_pred hcCCC
Q 020013 215 VEMDK 219 (332)
Q Consensus 215 ~~~~~ 219 (332)
.+..+
T Consensus 259 ~~~~~ 263 (297)
T 4adt_A 259 SNFNN 263 (297)
T ss_dssp HTTTC
T ss_pred HhhCC
Confidence 55443
No 57
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=99.47 E-value=3.8e-12 Score=115.37 Aligned_cols=144 Identities=18% Similarity=0.199 Sum_probs=108.6
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcH----HHHHHHHhCCCEEEEecCCHHHHHHHHH
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSE----ELVLEAHSAGVKVVPQVGSFDEARKAVN 128 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~----~~i~~~~~~g~~v~~~v~s~~~a~~a~~ 128 (332)
+.++.+|+.++.|+-..=++. +..+++.+.+.|+|.|.+.....+. ++++.+++.|+.++..+++.+++..+.+
T Consensus 103 ~~l~~ir~~v~lPvl~kdfii--d~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~ 180 (272)
T 3qja_A 103 DDLDAVRASVSIPVLRKDFVV--QPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALK 180 (272)
T ss_dssp HHHHHHHHHCSSCEEEESCCC--SHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEECcccc--CHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence 356667776778876543332 2346888999999999984322222 4456677889999999999999999999
Q ss_pred cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 129 AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 129 ~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
.|+|+|.+.+...... ...+..+.++.+.++. ++||++.|||.+++++.+++.+||+||.+||+|+.++.
T Consensus 181 ~Gad~IGv~~r~l~~~----~~dl~~~~~l~~~v~~-~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a~d 250 (272)
T 3qja_A 181 AGAKVIGVNARDLMTL----DVDRDCFARIAPGLPS-SVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGD 250 (272)
T ss_dssp HTCSEEEEESBCTTTC----CBCTTHHHHHGGGSCT-TSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTCSC
T ss_pred CCCCEEEECCCccccc----ccCHHHHHHHHHhCcc-cCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCCCC
Confidence 9999999976532211 1234556666665532 68999999999999999999999999999999998763
No 58
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=99.42 E-value=1.7e-12 Score=114.45 Aligned_cols=157 Identities=18% Similarity=0.286 Sum_probs=117.2
Q ss_pred HHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhh-cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcHHHHHH
Q 020013 27 LVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLE 105 (332)
Q Consensus 27 la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~-~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~~~i~~ 105 (332)
++.++ -.||+.++... +.+++. .+.++++++. .+..++.+.++ ..+.++.+++.|+|+|+++ + ...++++.
T Consensus 34 ~~~al-~~gGv~~iel~-~k~~~~-~~~i~~l~~~~~~l~vgaGtvl---~~d~~~~A~~aGAd~v~~p-~-~d~~v~~~ 105 (224)
T 1vhc_A 34 LADTL-AKNGLSVAEIT-FRSEAA-ADAIRLLRANRPDFLIAAGTVL---TAEQVVLAKSSGADFVVTP-G-LNPKIVKL 105 (224)
T ss_dssp HHHHH-HHTTCCEEEEE-TTSTTH-HHHHHHHHHHCTTCEEEEESCC---SHHHHHHHHHHTCSEEECS-S-CCHHHHHH
T ss_pred HHHHH-HHcCCCEEEEe-ccCchH-HHHHHHHHHhCcCcEEeeCcEe---eHHHHHHHHHCCCCEEEEC-C-CCHHHHHH
Confidence 34433 34778888763 455543 3455655543 34556666544 3688999999999999876 3 35677888
Q ss_pred HHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHH
Q 020013 106 AHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL 185 (332)
Q Consensus 106 ~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al 185 (332)
+++.|.++++.+.|+.++..+.+.|+|+|.+...+ .......+++++..++ ++|+++.||| +.+|+.+++
T Consensus 106 ar~~g~~~i~Gv~t~~e~~~A~~~Gad~vk~Fpa~-------~~gG~~~lk~l~~~~~--~ipvvaiGGI-~~~N~~~~l 175 (224)
T 1vhc_A 106 CQDLNFPITPGVNNPMAIEIALEMGISAVKFFPAE-------ASGGVKMIKALLGPYA--QLQIMPTGGI-GLHNIRDYL 175 (224)
T ss_dssp HHHTTCCEECEECSHHHHHHHHHTTCCEEEETTTT-------TTTHHHHHHHHHTTTT--TCEEEEBSSC-CTTTHHHHH
T ss_pred HHHhCCCEEeccCCHHHHHHHHHCCCCEEEEeeCc-------cccCHHHHHHHHhhCC--CCeEEEECCc-CHHHHHHHH
Confidence 88899998888999999999999999999993311 1112567777777664 6999999999 899999999
Q ss_pred Hc-CcceeeeccccccCc
Q 020013 186 SL-GAQGICLGTRFVASE 202 (332)
Q Consensus 186 ~~-GA~gV~~GT~fl~t~ 202 (332)
++ |+++|. ||.++..+
T Consensus 176 ~agga~~v~-gS~i~~~~ 192 (224)
T 1vhc_A 176 AIPNIVACG-GSWFVEKK 192 (224)
T ss_dssp TSTTBCCEE-ECGGGCHH
T ss_pred hcCCCEEEE-EchhcCcc
Confidence 99 999999 99987654
No 59
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=99.42 E-value=2e-12 Score=114.48 Aligned_cols=145 Identities=16% Similarity=0.215 Sum_probs=108.7
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC--Cc-HHHHHHHHhCCCEEEEec--CCHHHHHHHH
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--YS-EELVLEAHSAGVKVVPQV--GSFDEARKAV 127 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~--~~-~~~i~~~~~~g~~v~~~v--~s~~~a~~a~ 127 (332)
+.++++|+.++.|+.+.++++++ .++++.+.+.|+|.|++|.+. .+ .+.++.+++.|++++..+ ++..+....+
T Consensus 54 ~~~~~lr~~~~~~~~v~lmv~d~-~~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~ 132 (228)
T 1h1y_A 54 PVIQSLRKHTKAYLDCHLMVTNP-SDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPL 132 (228)
T ss_dssp HHHHHHHTTCCSEEEEEEESSCG-GGGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHH
T ss_pred HHHHHHHhhcCCcEEEEEEecCH-HHHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHH
Confidence 45677777777799999999776 567899999999999999643 34 567888899999988777 4444444444
Q ss_pred Hc---CCCEEEEecCCCC--cccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCc
Q 020013 128 NA---GVDAIIVQGREAG--GHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 128 ~~---g~D~ivv~G~eaG--Gh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
.. ++|+|.+.....| |.. .....+..+.++++... ++||+++||| +.+++.+++..|||++++||+++..+
T Consensus 133 ~~~~~~~d~vl~~sv~pg~~g~~-~~~~~l~~i~~~~~~~~--~~pi~v~GGI-~~~ni~~~~~aGaD~vvvGsai~~~~ 208 (228)
T 1h1y_A 133 VEAENPVELVLVMTVEPGFGGQK-FMPEMMEKVRALRKKYP--SLDIEVDGGL-GPSTIDVAASAGANCIVAGSSIFGAA 208 (228)
T ss_dssp HHSSSCCSEEEEESSCTTCSSCC-CCGGGHHHHHHHHHHCT--TSEEEEESSC-STTTHHHHHHHTCCEEEESHHHHTSS
T ss_pred HhcCCCCCEEEEEeecCCCCccc-CCHHHHHHHHHHHHhcC--CCCEEEECCc-CHHHHHHHHHcCCCEEEECHHHHCCC
Confidence 44 9999999655433 221 12234556666666542 6899999999 67999999999999999999998764
No 60
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=99.42 E-value=2.7e-12 Score=112.39 Aligned_cols=157 Identities=20% Similarity=0.331 Sum_probs=117.1
Q ss_pred HHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhh-cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcHHHHHH
Q 020013 27 LVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLE 105 (332)
Q Consensus 27 la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~-~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~~~i~~ 105 (332)
++.++ -.||+.++... +.++.. .+.++++++. .+..++.+.++ ..+.++.+++.|+|+|+++ + ...++.+.
T Consensus 33 ~~~al-~~gGv~~iel~-~k~~~~-~~~i~~l~~~~~~~~vgagtvi---~~d~~~~A~~aGAd~v~~p-~-~d~~v~~~ 104 (214)
T 1wbh_A 33 MAKAL-VAGGVRVLNVT-LRTECA-VDAIRAIAKEVPEAIVGAGTVL---NPQQLAEVTEAGAQFAISP-G-LTEPLLKA 104 (214)
T ss_dssp HHHHH-HHTTCCEEEEE-SCSTTH-HHHHHHHHHHCTTSEEEEESCC---SHHHHHHHHHHTCSCEEES-S-CCHHHHHH
T ss_pred HHHHH-HHcCCCEEEEe-CCChhH-HHHHHHHHHHCcCCEEeeCEEE---EHHHHHHHHHcCCCEEEcC-C-CCHHHHHH
Confidence 44444 34778888763 455544 3455655443 34456666544 2688999999999999887 3 46778888
Q ss_pred HHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHH
Q 020013 106 AHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL 185 (332)
Q Consensus 106 ~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al 185 (332)
.+..|+.+++.+.|++|+..+.+.|+|+|.+...+ .......+++++..++ ++|+++.||| +.+|+.+++
T Consensus 105 ~~~~g~~~i~G~~t~~e~~~A~~~Gad~v~~Fpa~-------~~gG~~~lk~i~~~~~--~ipvvaiGGI-~~~n~~~~l 174 (214)
T 1wbh_A 105 ATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAE-------ANGGVKALQAIAGPFS--QVRFCPTGGI-SPANYRDYL 174 (214)
T ss_dssp HHHSSSCEEEEESSHHHHHHHHHTTCCEEEETTTT-------TTTHHHHHHHHHTTCT--TCEEEEBSSC-CTTTHHHHH
T ss_pred HHHhCCCEEEecCCHHHHHHHHHCCCCEEEEecCc-------cccCHHHHHHHhhhCC--CCeEEEECCC-CHHHHHHHH
Confidence 88999999988999999999999999999983311 1112566777776654 6999999999 899999999
Q ss_pred Hc-CcceeeeccccccCc
Q 020013 186 SL-GAQGICLGTRFVASE 202 (332)
Q Consensus 186 ~~-GA~gV~~GT~fl~t~ 202 (332)
++ |+++|. ||.++..+
T Consensus 175 ~agg~~~v~-gS~i~~~~ 191 (214)
T 1wbh_A 175 ALKSVLCIG-GSWLVPAD 191 (214)
T ss_dssp TSTTBSCEE-EGGGSCHH
T ss_pred hcCCCeEEE-eccccChh
Confidence 99 999999 99987654
No 61
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=99.42 E-value=1e-12 Score=116.52 Aligned_cols=147 Identities=15% Similarity=0.196 Sum_probs=114.4
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccC----CCcHHHHHHHHhCCCEEEEec--CCHHHHHHH
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG----EYSEELVLEAHSAGVKVVPQV--GSFDEARKA 126 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g----~~~~~~i~~~~~~g~~v~~~v--~s~~~a~~a 126 (332)
+.++++|+.++.|+.+.++++++ +++++.+.+.|+|.|++|.. +.+.+.++.+++.|+++...+ +|+.+....
T Consensus 52 ~~v~~lr~~~~~~~~vhlmv~dp-~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~ 130 (230)
T 1tqj_A 52 LIVDAIRPLTKKTLDVHLMIVEP-EKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEY 130 (230)
T ss_dssp HHHHHHGGGCCSEEEEEEESSSG-GGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTT
T ss_pred HHHHHHHhhcCCcEEEEEEccCH-HHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHH
Confidence 56788888888899999999776 56889999999999999976 456688899999999998877 566666666
Q ss_pred HHcCCCEEEEecCCCC--cccCCCCchhhhHHHHHHHhC--CCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCc
Q 020013 127 VNAGVDAIIVQGREAG--GHVIGQDGLISLLPMVVDLIG--DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 127 ~~~g~D~ivv~G~eaG--Gh~~~~~~~~~ll~~i~~~~~--~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
+..++|+|.+-....| |.. .....+..+.++++..+ +.++||.+.||| +.+++.++..+|||++++||+++.++
T Consensus 131 ~~~~~D~v~~msv~pg~ggq~-~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI-~~~~~~~~~~aGad~vvvGSai~~a~ 208 (230)
T 1tqj_A 131 VLPVCDLILIMSVNPGFGGQS-FIPEVLPKIRALRQMCDERGLDPWIEVDGGL-KPNNTWQVLEAGANAIVAGSAVFNAP 208 (230)
T ss_dssp TGGGCSEEEEESSCC----CC-CCGGGHHHHHHHHHHHHHHTCCCEEEEESSC-CTTTTHHHHHHTCCEEEESHHHHTSS
T ss_pred HHhcCCEEEEEEeccccCCcc-CcHHHHHHHHHHHHHHHhcCCCCcEEEECCc-CHHHHHHHHHcCCCEEEECHHHHCCC
Confidence 6679998877544333 322 22345667777776542 125899999999 56999999999999999999999754
No 62
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.42 E-value=1.8e-13 Score=126.51 Aligned_cols=210 Identities=15% Similarity=0.209 Sum_probs=133.6
Q ss_pred CCCcHHHHHHHHhCCCceeecC-----------C--CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcC
Q 020013 21 DISGPELVAAVANAGGLGLLRA-----------P--DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEK 87 (332)
Q Consensus 21 g~s~~~la~avs~aGglG~i~~-----------~--~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~ 87 (332)
+.+..+++.++.++|.-.+... + ...+++. ++++++.++.|+-++..... .+.++.+.+.|
T Consensus 27 ~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~----i~~I~~~~~iPv~~k~r~g~--~~~~~~~~a~G 100 (305)
T 2nv1_A 27 DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTI----VEEVMNAVSIPVMAKARIGH--IVEARVLEAMG 100 (305)
T ss_dssp EESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHH----HHHHHHHCSSCEEEEECTTC--HHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHH----HHHHHHhCCCCEEecccccc--hHHHHHHHHCC
Confidence 3567788998888886555221 0 1123444 44455556788887765422 45677888899
Q ss_pred CcEEEEccCCCcHHHHHH--HHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCC--------ccc------------
Q 020013 88 VAVLQVSWGEYSEELVLE--AHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAG--------GHV------------ 145 (332)
Q Consensus 88 ~~~I~~~~g~~~~~~i~~--~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaG--------Gh~------------ 145 (332)
+|.|......++.++.+. .++.|++++..+.+++++.++.+.|+|+|.++| ++| +|.
T Consensus 101 Ad~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a~~~Gad~V~~~G-~~g~g~~~~~~~h~rt~~~~i~~l~g 179 (305)
T 2nv1_A 101 VDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKG-EPGTGNIVEAVRHMRKVNAQVRKVVA 179 (305)
T ss_dssp CSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECC-CTTSCCTHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHHHHHHCCCCEEEecc-ccCccchHHHHhhhhhhhccchhhcc
Confidence 999973311122222111 235689999999999999999999999999988 444 131
Q ss_pred ---CC-------CCchhhhHHHHHHHhCCCCCcEE--eecCcCCHHHHHHHHHcCcceeeeccccccCccC-CCCHHHHH
Q 020013 146 ---IG-------QDGLISLLPMVVDLIGDRDIPII--AAGGIVDARGYVAALSLGAQGICLGTRFVASEES-YAHPEYKR 212 (332)
Q Consensus 146 ---~~-------~~~~~~ll~~i~~~~~~~~iPvi--aaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es-~~~~~~k~ 212 (332)
.+ ....+.+++++.+.. ++||+ +.|||.+++++.+++.+|||+|++||+|+.+.+. .....+++
T Consensus 180 i~~~~~~~~~~~~~~~~~~i~~i~~~~---~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~ 256 (305)
T 2nv1_A 180 MSEDELMTEAKNLGAPYELLLQIKKDG---KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVE 256 (305)
T ss_dssp SCGGGHHHHHHHHTCCHHHHHHHHHHT---SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHH
T ss_pred ccchhhhcccccccccHHHHHHHHHhc---CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHH
Confidence 00 112366788887765 79998 9999999999999999999999999999987653 24566777
Q ss_pred HHhcCCCceEEEEecccCCCCCCceeecCh
Q 020013 213 KLVEMDKTEYTDVFGRARWPGAPHRVLQTP 242 (332)
Q Consensus 213 ~~~~~~~t~~t~~~~~~~~~g~~~R~l~n~ 242 (332)
.+.+..+.+....++ ...|.+.|++...
T Consensus 257 ~~~~~~~~~~~~~~~--~~~g~~~~~~~~~ 284 (305)
T 2nv1_A 257 ATTHFTDYKLIAELS--KELGTAMKGIEIS 284 (305)
T ss_dssp HHHTTTCHHHHHHHT--SCC----------
T ss_pred HHHHhcChhhHHHHH--HHhhhhhcCCChh
Confidence 777655443111112 2247777887633
No 63
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.42 E-value=3.8e-12 Score=135.32 Aligned_cols=191 Identities=15% Similarity=0.199 Sum_probs=130.3
Q ss_pred hhcC--CccceecCCCCCCCCcHHHHHHHHhCCCceeecCC----------C----------------------------
Q 020013 5 GMLG--FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAP----------D---------------------------- 44 (332)
Q Consensus 5 ~~l~--~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~----------~---------------------------- 44 (332)
+++| ++.||+.+||. +..+.+++.+..++| +|++..+ +
T Consensus 536 ~~~G~~~~nPv~lAa~~-~~~~~~~~~~~~~~g-~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~ 613 (1025)
T 1gte_A 536 EMAGLKFINPFGLASAA-PTTSSSMIRRAFEAG-WGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELI 613 (1025)
T ss_dssp EETTEEESSSEEECSSG-GGSSHHHHHHHHHHT-CSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCS
T ss_pred eeccccccCcccccCCC-CCCCHHHHHHHHHCC-cCeEEeceecccccccCCCCccEEeccccccccCCchhheeeeccc
Confidence 3455 45899999997 467788888777664 3444211 0
Q ss_pred -CCCHHHHHHHHHHHHhhc-CCcEEEEeecCCCC---HHHHHHHHhcCCcEEEEccCCCc------------------HH
Q 020013 45 -WEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPH---NENIKAILSEKVAVLQVSWGEYS------------------EE 101 (332)
Q Consensus 45 -~~~~e~~~~~i~~~r~~~-~~p~gvnl~~~~~~---~~~~~~~~~~~~~~I~~~~g~~~------------------~~ 101 (332)
....+.+.+.+.++++.. +.|+.+|++..... .+.++.+.+.++|+|.+++++|. .+
T Consensus 614 ~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~ 693 (1025)
T 1gte_A 614 SEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRN 693 (1025)
T ss_dssp CSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHH
T ss_pred cchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHH
Confidence 012334445566666544 68999999654322 23345556789999999876531 13
Q ss_pred HHHHHHhC-CCEEEEecC----C-HHHHHHHHHcCCCEEEEecC-----------------------CCCcccCCCCc--
Q 020013 102 LVLEAHSA-GVKVVPQVG----S-FDEARKAVNAGVDAIIVQGR-----------------------EAGGHVIGQDG-- 150 (332)
Q Consensus 102 ~i~~~~~~-g~~v~~~v~----s-~~~a~~a~~~g~D~ivv~G~-----------------------eaGGh~~~~~~-- 150 (332)
+++.+++. +++|+.++. + .+.++.+.+.|+|+|++.+. ..||+. +...
T Consensus 694 iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~s-g~~~~~ 772 (1025)
T 1gte_A 694 ICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVS-GTAIRP 772 (1025)
T ss_dssp HHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEE-SGGGHH
T ss_pred HHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCC-cccchh
Confidence 55666654 788886553 2 34578888999999999431 233433 2211
Q ss_pred -hhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 151 -LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 151 -~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
.+.+++++++.++ ++|||+.|||.+++++.++|++|||+|++|++|+.
T Consensus 773 ~~~~~v~~v~~~~~--~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 773 IALRAVTTIARALP--GFPILATGGIDSAESGLQFLHSGASVLQVCSAVQN 821 (1025)
T ss_dssp HHHHHHHHHHHHST--TCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHHHHcC--CCCEEEecCcCCHHHHHHHHHcCCCEEEEeecccc
Confidence 1467888888763 69999999999999999999999999999999997
No 64
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=99.41 E-value=1.7e-11 Score=110.70 Aligned_cols=168 Identities=16% Similarity=0.200 Sum_probs=122.2
Q ss_pred HHHHHHHHhCCC--ceeecCCCC--CCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcH
Q 020013 25 PELVAAVANAGG--LGLLRAPDW--EAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSE 100 (332)
Q Consensus 25 ~~la~avs~aGg--lG~i~~~~~--~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~ 100 (332)
.++|.+..++|. +-++....+ .+++. ++.+|+.++.|+-.+=|+.++ .++..+.+.|+|.|.+.....+.
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~----L~~ir~~v~lPVl~Kdfi~d~--~qi~ea~~~GAD~VlLi~a~L~~ 155 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQGAPEF----LTAARQACSLPALRKDFLFDP--YQVYEARSWGADCILIIMASVDD 155 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCCCHHH----HHHHHHTSSSCEEEESCCCST--HHHHHHHHTTCSEEEEETTTSCH
T ss_pred HHHHHHHHHCCCCEEEEeccccccCCCHHH----HHHHHHhcCCCEEECCccCCH--HHHHHHHHcCCCEEEEcccccCH
Confidence 467777766664 444433222 24443 466677778888666554433 46778889999999886433333
Q ss_pred ----HHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcC
Q 020013 101 ----ELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIV 176 (332)
Q Consensus 101 ----~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~ 176 (332)
++++.+++.|+.++..|++.+|+..+.+.|+|+|-+.++.. ++.. ..+....++.+.++. ++|+|+.|||.
T Consensus 156 ~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l--~t~~--~dl~~~~~L~~~ip~-~~~vIaesGI~ 230 (272)
T 3tsm_A 156 DLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNL--RSFE--VNLAVSERLAKMAPS-DRLLVGESGIF 230 (272)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCT--TTCC--BCTHHHHHHHHHSCT-TSEEEEESSCC
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCC--ccCC--CChHHHHHHHHhCCC-CCcEEEECCCC
Confidence 45566778899999999999999999999999998876632 2211 234455566665543 68999999999
Q ss_pred CHHHHHHHHHcCcceeeeccccccCcc
Q 020013 177 DARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 177 ~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
+++++..+..+||+||.+|++|+.+++
T Consensus 231 t~edv~~l~~~Ga~gvLVG~almr~~d 257 (272)
T 3tsm_A 231 THEDCLRLEKSGIGTFLIGESLMRQHD 257 (272)
T ss_dssp SHHHHHHHHTTTCCEEEECHHHHTSSC
T ss_pred CHHHHHHHHHcCCCEEEEcHHHcCCcC
Confidence 999999999999999999999998865
No 65
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.41 E-value=6.8e-13 Score=122.08 Aligned_cols=176 Identities=20% Similarity=0.250 Sum_probs=125.0
Q ss_pred CCCcHHHHHHHHhCCCceeecCCCCCCHHH----------HHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcE
Q 020013 21 DISGPELVAAVANAGGLGLLRAPDWEAPDY----------LRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAV 90 (332)
Q Consensus 21 g~s~~~la~avs~aGglG~i~~~~~~~~e~----------~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~ 90 (332)
.++..+++.++.++|.-++.... ..+.+. ..+.++++++.++.|+-++.-.. +.+.++.+.+.|+|.
T Consensus 27 ~~~~~~~a~~~~~~Ga~~i~~~e-~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~--~~~~~~~~~~aGad~ 103 (297)
T 2zbt_A 27 DVTTPEQAVIAEEAGAVAVMALE-RVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIG--HFVEAMILEAIGVDF 103 (297)
T ss_dssp EESSHHHHHHHHHHTCSEEEECS-SCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETT--CHHHHHHHHHTTCSE
T ss_pred eechHHHHHHHHHCCCcEEEecc-ccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccC--CHHHHHHHHHCCCCE
Confidence 35668999999998876653211 111110 12346677777788987765443 367889999999999
Q ss_pred EEEccCCCcHHHHHHHHhC--CCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCc-------c--------------cCC
Q 020013 91 LQVSWGEYSEELVLEAHSA--GVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGG-------H--------------VIG 147 (332)
Q Consensus 91 I~~~~g~~~~~~i~~~~~~--g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGG-------h--------------~~~ 147 (332)
|..++...+.++++.+++. ++.++..+++++++..+.+.|+|+|.++|.+..| | +..
T Consensus 104 v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~ 183 (297)
T 2zbt_A 104 IDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLRED 183 (297)
T ss_dssp EEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred EeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCC
Confidence 9666433333445555543 7788888999999999999999999998753222 1 000
Q ss_pred --------CCchhhhHHHHHHHhCCCCCcEE--eecCcCCHHHHHHHHHcCcceeeeccccccCc
Q 020013 148 --------QDGLISLLPMVVDLIGDRDIPII--AAGGIVDARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 148 --------~~~~~~ll~~i~~~~~~~~iPvi--aaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
....+.+++++++.. ++|++ +.|||++++++.+++.+|||+|++||+++.+.
T Consensus 184 ~~~~~~~~~~~~~~~i~~l~~~~---~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~ 245 (297)
T 2zbt_A 184 ELMAYAKEIGAPFELVKWVHDHG---RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSG 245 (297)
T ss_dssp GHHHHHHHHTCCHHHHHHHHHHS---SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSS
T ss_pred CchhhhhcchhhHHHHHHHHHhc---CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCC
Confidence 012356677777765 68988 99999999999999999999999999999753
No 66
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.39 E-value=4.2e-12 Score=110.79 Aligned_cols=145 Identities=17% Similarity=0.179 Sum_probs=109.4
Q ss_pred HHHHHHHhh-cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCC---cHHHHHHHHhCCCEEEEe---cCCH-HHHH
Q 020013 53 DLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVVPQ---VGSF-DEAR 124 (332)
Q Consensus 53 ~~i~~~r~~-~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~---~~~~i~~~~~~g~~v~~~---v~s~-~~a~ 124 (332)
+.++++|+. ++.|+.+|+++..+.+..++.+.+.|+|.|.+|.... ..++++.+++.|++++.. +.++ +.++
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~ 121 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVR 121 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH
Confidence 457777776 6889999998876544458999999999999984321 145677788889998865 3344 6688
Q ss_pred HHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCc
Q 020013 125 KAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 125 ~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
.+.+.|+|+|.+. +..+|...+ ...+..++++++... ++|+++.||| +++++.+++.+|||+|++||+++.++
T Consensus 122 ~~~~~g~d~i~v~-~g~~g~~~~-~~~~~~i~~l~~~~~--~~~i~~~gGI-~~~~~~~~~~~Gad~vvvGsai~~~~ 194 (211)
T 3f4w_A 122 LLEEAGADMLAVH-TGTDQQAAG-RKPIDDLITMLKVRR--KARIAVAGGI-SSQTVKDYALLGPDVVIVGSAITHAA 194 (211)
T ss_dssp HHHHHTCCEEEEE-CCHHHHHTT-CCSHHHHHHHHHHCS--SCEEEEESSC-CTTTHHHHHTTCCSEEEECHHHHTCS
T ss_pred HHHHcCCCEEEEc-CCCcccccC-CCCHHHHHHHHHHcC--CCcEEEECCC-CHHHHHHHHHcCCCEEEECHHHcCCC
Confidence 8999999998774 322233211 124677888887653 6999999999 59999999999999999999998764
No 67
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.39 E-value=8.8e-12 Score=108.92 Aligned_cols=154 Identities=17% Similarity=0.255 Sum_probs=111.3
Q ss_pred CCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEE
Q 020013 34 AGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKV 113 (332)
Q Consensus 34 aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v 113 (332)
.||+..+.. +..+++.+ +.++++++..+.++-++.-... +.+.++.+.+.|+|+|++. ....++++.+++.|.++
T Consensus 30 ~~G~~~i~l-~~~~~~~~-~~i~~i~~~~~~~l~vg~g~~~-~~~~i~~a~~~Gad~V~~~--~~~~~~~~~~~~~g~~~ 104 (212)
T 2v82_A 30 DAGFDAVEI-PLNSPQWE-QSIPAIVDAYGDKALIGAGTVL-KPEQVDALARMGCQLIVTP--NIHSEVIRRAVGYGMTV 104 (212)
T ss_dssp HHTCCEEEE-ETTSTTHH-HHHHHHHHHHTTTSEEEEECCC-SHHHHHHHHHTTCCEEECS--SCCHHHHHHHHHTTCEE
T ss_pred HCCCCEEEE-eCCChhHH-HHHHHHHHhCCCCeEEEecccc-CHHHHHHHHHcCCCEEEeC--CCCHHHHHHHHHcCCCE
Confidence 356777755 23444443 3455555444555555322111 3568999999999999754 45677888888899998
Q ss_pred EEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceee
Q 020013 114 VPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIC 193 (332)
Q Consensus 114 ~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~ 193 (332)
+..++|+++++.+.+.|+|+|.+... . ...+..++++++.++. ++||++.||| +.+++.+++++||++|.
T Consensus 105 ~~g~~t~~e~~~a~~~G~d~v~v~~t---~-----~~g~~~~~~l~~~~~~-~ipvia~GGI-~~~~i~~~~~~Ga~gv~ 174 (212)
T 2v82_A 105 CPGCATATEAFTALEAGAQALKIFPS---S-----AFGPQYIKALKAVLPS-DIAVFAVGGV-TPENLAQWIDAGCAGAG 174 (212)
T ss_dssp ECEECSHHHHHHHHHTTCSEEEETTH---H-----HHCHHHHHHHHTTSCT-TCEEEEESSC-CTTTHHHHHHHTCSEEE
T ss_pred EeecCCHHHHHHHHHCCCCEEEEecC---C-----CCCHHHHHHHHHhccC-CCeEEEeCCC-CHHHHHHHHHcCCCEEE
Confidence 88899999999999999999987321 1 1125667777765521 4999999999 59999999999999999
Q ss_pred eccccccCc
Q 020013 194 LGTRFVASE 202 (332)
Q Consensus 194 ~GT~fl~t~ 202 (332)
+||+|+.+.
T Consensus 175 vGsai~~~~ 183 (212)
T 2v82_A 175 LGSDLYRAG 183 (212)
T ss_dssp ECTTTCCTT
T ss_pred EChHHhCCC
Confidence 999998763
No 68
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=99.37 E-value=2e-12 Score=113.98 Aligned_cols=158 Identities=18% Similarity=0.250 Sum_probs=117.6
Q ss_pred HHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhh-cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcHHHHH
Q 020013 26 ELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVL 104 (332)
Q Consensus 26 ~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~-~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~~~i~ 104 (332)
+++.++. .||+.++... +.++.. .+.++++++. .+..++.+.++ ..+.++.+++.|+|+|+++ + ...++.+
T Consensus 42 ~~~~al~-~gGv~~iel~-~k~~~~-~~~i~~l~~~~~~~~igagtvl---~~d~~~~A~~aGAd~v~~p-~-~d~~v~~ 113 (225)
T 1mxs_A 42 PLADALA-AGGIRTLEVT-LRSQHG-LKAIQVLREQRPELCVGAGTVL---DRSMFAAVEAAGAQFVVTP-G-ITEDILE 113 (225)
T ss_dssp HHHHHHH-HTTCCEEEEE-SSSTHH-HHHHHHHHHHCTTSEEEEECCC---SHHHHHHHHHHTCSSEECS-S-CCHHHHH
T ss_pred HHHHHHH-HCCCCEEEEe-cCCccH-HHHHHHHHHhCcccEEeeCeEe---eHHHHHHHHHCCCCEEEeC-C-CCHHHHH
Confidence 3444443 4778888763 555544 3456655443 35556777644 3688999999999999876 3 4667888
Q ss_pred HHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHH
Q 020013 105 EAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAA 184 (332)
Q Consensus 105 ~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~a 184 (332)
..+..|+.+++.+.|++|+..+.+.|+|+|.+...+ .......++.++..++ ++|+++.||| +.+|+.++
T Consensus 114 ~~~~~g~~~i~G~~t~~e~~~A~~~Gad~vk~FPa~-------~~~G~~~lk~i~~~~~--~ipvvaiGGI-~~~N~~~~ 183 (225)
T 1mxs_A 114 AGVDSEIPLLPGISTPSEIMMGYALGYRRFKLFPAE-------ISGGVAAIKAFGGPFG--DIRFCPTGGV-NPANVRNY 183 (225)
T ss_dssp HHHHCSSCEECEECSHHHHHHHHTTTCCEEEETTHH-------HHTHHHHHHHHHTTTT--TCEEEEBSSC-CTTTHHHH
T ss_pred HHHHhCCCEEEeeCCHHHHHHHHHCCCCEEEEccCc-------cccCHHHHHHHHhhCC--CCeEEEECCC-CHHHHHHH
Confidence 888899999988999999999999999999882210 0112466777776654 6999999999 89999999
Q ss_pred HH-cCcceeeeccccccCc
Q 020013 185 LS-LGAQGICLGTRFVASE 202 (332)
Q Consensus 185 l~-~GA~gV~~GT~fl~t~ 202 (332)
++ .|+++|. ||.++..+
T Consensus 184 l~~~Ga~~v~-gSai~~~~ 201 (225)
T 1mxs_A 184 MALPNVMCVG-TTWMLDSS 201 (225)
T ss_dssp HHSTTBCCEE-ECTTSCHH
T ss_pred HhccCCEEEE-EchhcCch
Confidence 99 6999999 99987654
No 69
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.35 E-value=3.3e-12 Score=111.64 Aligned_cols=174 Identities=14% Similarity=0.096 Sum_probs=113.6
Q ss_pred HHHHHHHHhCCCceeecCCC-CCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcHHHH
Q 020013 25 PELVAAVANAGGLGLLRAPD-WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELV 103 (332)
Q Consensus 25 ~~la~avs~aGglG~i~~~~-~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~~~i 103 (332)
.+.+.++.. +|+..+.... ..+.+++.+.++++. . .+++.++++. .++.+.+.+++.|+++..+.+. .
T Consensus 16 ~~~~~~a~~-~Gv~~v~lr~k~~~~~~~~~~i~~l~---~-~~~~~livnd----~~~~A~~~gadgvhl~~~~~~~--~ 84 (210)
T 3ceu_A 16 DKIITALFE-EGLDILHLRKPETPAMYSERLLTLIP---E-KYHRRIVTHE----HFYLKEEFNLMGIHLNARNPSE--P 84 (210)
T ss_dssp HHHHHHHHH-TTCCEEEECCSSCCHHHHHHHHHHSC---G-GGGGGEEESS----CTTHHHHTTCSEEECCSSSCSC--C
T ss_pred HHHHHHHHH-CCCCEEEEccCCCCHHHHHHHHHHHH---H-HhCCeEEEeC----CHHHHHHcCCCEEEECcccccc--c
Confidence 344554444 5566665421 134555555554433 2 3567777753 3578889999999886443221 1
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEec-CCCCcccCC-CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQG-REAGGHVIG-QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G-~eaGGh~~~-~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v 181 (332)
...+..+...++|++++..+. .|+|+|.+.. +...+|.+. ....+..++++.+.+. .++||++.||| +++|+
T Consensus 85 ---~~~~~~ig~s~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~-~~iPviaiGGI-~~~nv 158 (210)
T 3ceu_A 85 ---HDYAGHVSCSCHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKI-IDSKVMALGGI-NEDNL 158 (210)
T ss_dssp ---TTCCSEEEEEECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTC-SSTTEEEESSC-CTTTH
T ss_pred ---cccCCEEEEecCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcC-CCCCEEEECCC-CHHHH
Confidence 124778889999999999988 9999999844 233444311 1234677787776520 16999999999 79999
Q ss_pred HHHHHcCcceeeeccccccCccCCCCHHHHHHHh
Q 020013 182 VAALSLGAQGICLGTRFVASEESYAHPEYKRKLV 215 (332)
Q Consensus 182 ~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~ 215 (332)
.+++.+||+||.++|.++..++......|++.+.
T Consensus 159 ~~~~~~Ga~gVav~s~i~~~~d~~~~~~~~~~v~ 192 (210)
T 3ceu_A 159 LEIKDFGFGGAVVLGDLWNKFDACLDQNYLAVIE 192 (210)
T ss_dssp HHHHHTTCSEEEESHHHHTTCCTTTSSCCHHHHH
T ss_pred HHHHHhCCCEEEEhHHhHcCCCHHHHHHHHHHHH
Confidence 9999999999999999998766554455555443
No 70
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=99.34 E-value=5.3e-12 Score=111.78 Aligned_cols=149 Identities=14% Similarity=0.210 Sum_probs=108.5
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccC--C--CcHHHHHHHHhCCCEEEEec--CCHHHHHHH
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG--E--YSEELVLEAHSAGVKVVPQV--GSFDEARKA 126 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g--~--~~~~~i~~~~~~g~~v~~~v--~s~~~a~~a 126 (332)
+.++++++.++.|+.+.++++++ ++.++.+.+.|+|.|++|.. . .+.+.++.+++.|++++..+ ++..+....
T Consensus 58 ~~i~~l~~~~~~~~~v~l~vnd~-~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~ 136 (230)
T 1rpx_A 58 LVVDSLRPITDLPLDVHLMIVEP-DQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEY 136 (230)
T ss_dssp HHHHHHGGGCCSCEEEEEESSSH-HHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTT
T ss_pred HHHHHHHhccCCcEEEEEEecCH-HHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH
Confidence 45677777777799999999864 46788889999999999954 2 34467888888899888776 455555555
Q ss_pred HHcCCCEEEEecCCCCcccC-CCCchhhhHHHHHHHhC--CCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 127 VNAGVDAIIVQGREAGGHVI-GQDGLISLLPMVVDLIG--DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 127 ~~~g~D~ivv~G~eaGGh~~-~~~~~~~ll~~i~~~~~--~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
+..++|+|.+.+...|+... .....+..+.++++... ..++|+++.||| +++++.+++++|||+|.+||+++.++.
T Consensus 137 ~~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI-~~~n~~~~~~aGad~vvvgSaI~~a~d 215 (230)
T 1rpx_A 137 VLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGV-GPKNAYKVIEAGANALVAGSAVFGAPD 215 (230)
T ss_dssp TTTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSC-CTTTHHHHHHHTCCEEEESHHHHTSSC
T ss_pred HHhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCC-CHHHHHHHHHcCCCEEEEChhhhCCCC
Confidence 56789999887665443210 11223445555555431 115899999999 689999999999999999999987543
No 71
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.34 E-value=5.9e-12 Score=111.00 Aligned_cols=165 Identities=16% Similarity=0.171 Sum_probs=106.5
Q ss_pred HHHHHHHhCCCceeecCCC-CCCHHHH---HHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcHH
Q 020013 26 ELVAAVANAGGLGLLRAPD-WEAPDYL---RDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEE 101 (332)
Q Consensus 26 ~la~avs~aGglG~i~~~~-~~~~e~~---~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~~ 101 (332)
+.+.++.++| +..+.... ..++..+ .+.++.+++.+. +++++++++ +.++.+.+.++++|++..... +
T Consensus 35 ~~~~~~~~~G-~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~-~~~v~v~v~----~~~~~a~~~gad~v~l~~~~~--~ 106 (227)
T 2tps_A 35 TVVQKALKGG-ATLYQFREKGGDALTGEARIKFAEKAQAACR-EAGVPFIVN----DDVELALNLKADGIHIGQEDA--N 106 (227)
T ss_dssp HHHHHHHHHT-CSEEEECCCSTTCCCHHHHHHHHHHHHHHHH-HHTCCEEEE----SCHHHHHHHTCSEEEECTTSS--C
T ss_pred HHHHHHHHCC-CCEEEEecCCCCHhHHHHHHHHHHHHHHHHH-HcCCeEEEc----CHHHHHHHcCCCEEEECCCcc--C
Confidence 4556665555 44443210 1233333 455555554432 345555553 346788889999999853322 2
Q ss_pred HHHHHHhCC-CEEEEecCCHHHHHHHHHcCCCEEEEec-CCCCcccC-CCCchhhhHHHHHHHhCCCC-CcEEeecCcCC
Q 020013 102 LVLEAHSAG-VKVVPQVGSFDEARKAVNAGVDAIIVQG-REAGGHVI-GQDGLISLLPMVVDLIGDRD-IPIIAAGGIVD 177 (332)
Q Consensus 102 ~i~~~~~~g-~~v~~~v~s~~~a~~a~~~g~D~ivv~G-~eaGGh~~-~~~~~~~ll~~i~~~~~~~~-iPviaaGGI~~ 177 (332)
+.+..+..| ..+...+++.+++..+.+.|+|+|++.. +..+.+.+ +....+.+++++++.. + +||+++||| +
T Consensus 107 ~~~~~~~~g~~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~---~~~pvia~GGI-~ 182 (227)
T 2tps_A 107 AKEVRAAIGDMILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQG---ISIPIVGIGGI-T 182 (227)
T ss_dssp HHHHHHHHTTSEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTT---CCCCEEEESSC-C
T ss_pred HHHHHHhcCCcEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhC---CCCCEEEEcCC-C
Confidence 222222234 4555567899999999999999999722 12222221 2234578888888766 5 999999999 5
Q ss_pred HHHHHHHHHcCcceeeeccccccCc
Q 020013 178 ARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 178 ~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
++|+.+++.+||+||.+||+++.++
T Consensus 183 ~~nv~~~~~~Ga~gv~vgs~i~~~~ 207 (227)
T 2tps_A 183 IDNAAPVIQAGADGVSMISAISQAE 207 (227)
T ss_dssp TTTSHHHHHTTCSEEEESHHHHTSS
T ss_pred HHHHHHHHHcCCCEEEEhHHhhcCC
Confidence 9999999999999999999998763
No 72
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.32 E-value=6.9e-12 Score=110.78 Aligned_cols=124 Identities=15% Similarity=0.202 Sum_probs=94.7
Q ss_pred CCcEEEEcc-CC------CcHHHH---HHHHhCCCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhH
Q 020013 87 KVAVLQVSW-GE------YSEELV---LEAHSAGVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLL 155 (332)
Q Consensus 87 ~~~~I~~~~-g~------~~~~~i---~~~~~~g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll 155 (332)
+-++|.+-. ++ .+.+.+ +.+.+.|+++++ .+.++..+++.++.|+|+|...|..-|+.. + ..++.+|
T Consensus 102 ~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~-G-i~~~~lI 179 (265)
T 1wv2_A 102 GHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGL-G-ICNPYNL 179 (265)
T ss_dssp SCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCC-C-CSCHHHH
T ss_pred CCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCC-C-cCCHHHH
Confidence 678887632 22 123444 445566999996 667999999999999999988777655532 2 2458899
Q ss_pred HHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCC--CHHHHHHHhc
Q 020013 156 PMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA--HPEYKRKLVE 216 (332)
Q Consensus 156 ~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~--~~~~k~~~~~ 216 (332)
+.+++.. ++|||++|||+++++++.++.+|||||++||++..+ |.+. ...|++++..
T Consensus 180 ~~I~e~~---~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a-~dP~~ma~af~~Av~a 238 (265)
T 1wv2_A 180 RIILEEA---KVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHA-KDPVMMAEAMKHAIVA 238 (265)
T ss_dssp HHHHHHC---SSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHTS-SSHHHHHHHHHHHHHH
T ss_pred HHHHhcC---CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCC-CCHHHHHHHHHHHHHH
Confidence 9999876 799999999999999999999999999999999843 4443 5667776643
No 73
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.31 E-value=9e-12 Score=111.16 Aligned_cols=144 Identities=18% Similarity=0.242 Sum_probs=104.1
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC--CcHHHHHHHHhCCCEE--EEecC----------
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--YSEELVLEAHSAGVKV--VPQVG---------- 118 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~--~~~~~i~~~~~~g~~v--~~~v~---------- 118 (332)
+.++++++.++.|+-+|..+.. .+.++.+++.|+|.|.++... .|..+.+.++..|.++ ...+.
T Consensus 65 ~~i~~i~~~~~ipv~v~ggI~~--~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~ 142 (244)
T 1vzw_A 65 ALIAEVAQAMDIKVELSGGIRD--DDTLAAALATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWT 142 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCS--HHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSC
T ss_pred HHHHHHHHhcCCcEEEECCcCC--HHHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcc
Confidence 5677787777899999887764 456888899999999987421 2333444444444332 23332
Q ss_pred ----C-HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHc---Ccc
Q 020013 119 ----S-FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL---GAQ 190 (332)
Q Consensus 119 ----s-~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~---GA~ 190 (332)
+ .+.++.+++.|+|.|++.+.+.+|+..+ ..+.+++++++.+ ++||++.|||.+++++.+++++ ||+
T Consensus 143 ~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g--~~~~~~~~i~~~~---~ipvia~GGI~~~~d~~~~~~~~~~Gad 217 (244)
T 1vzw_A 143 RDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQG--PNLELLKNVCAAT---DRPVVASGGVSSLDDLRAIAGLVPAGVE 217 (244)
T ss_dssp CCCCBHHHHHHHHHHTTCCCEEEEEC-------C--CCHHHHHHHHHTC---SSCEEEESCCCSHHHHHHHHTTGGGTEE
T ss_pred cCCCCHHHHHHHHHhCCCCEEEEeccCcccccCC--CCHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHhhccCCCc
Confidence 4 4557889999999999988766665322 3578888888776 7999999999999999999999 999
Q ss_pred eeeeccccccCcc
Q 020013 191 GICLGTRFVASEE 203 (332)
Q Consensus 191 gV~~GT~fl~t~E 203 (332)
+|++||+|+..+.
T Consensus 218 gv~vG~al~~~~~ 230 (244)
T 1vzw_A 218 GAIVGKALYAKAF 230 (244)
T ss_dssp EEEECHHHHTTSS
T ss_pred eeeeeHHHHcCCC
Confidence 9999999997653
No 74
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=99.31 E-value=6.1e-11 Score=104.47 Aligned_cols=161 Identities=19% Similarity=0.263 Sum_probs=112.2
Q ss_pred CCCcHHHHHHHHhCC--CceeecC---CCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc
Q 020013 21 DISGPELVAAVANAG--GLGLLRA---PDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW 95 (332)
Q Consensus 21 g~s~~~la~avs~aG--glG~i~~---~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~ 95 (332)
|+++++.+.++ ++| .+||+.. +++.+++..+++++.. ...++.+.++++. ++..+.+.+.+.|+|++|
T Consensus 27 Git~~ed~~a~-~~gaD~iGfIf~~~SpR~V~~~~A~~i~~~~---~~~~~~v~v~v~~--~ei~~~i~~~~ld~vQLH- 99 (228)
T 4aaj_A 27 GIKSLEELEIV-EKHADATGVVVNSNSKRRIPLEKAREIIENS---AIPVFLVSTMVGF--SEWAMAIERTGAQYIQVH- 99 (228)
T ss_dssp CCCSHHHHHHH-HTTCSEEEEECSSSSTTBCCHHHHHHHHHHC---SSCEEEEECCCCH--HHHHHHHHHHTCSEEEEC-
T ss_pred CCCcHHHHHHH-HcCCCEEEEEecCCCCCCCCHHHHHHHHHhh---CCCCEEEeccCch--HHHHHHHHhccchheecc-
Confidence 57888887654 677 5999974 4567888776665532 2345666666642 455666677899999999
Q ss_pred CCCcHHHHHHHHh-CCCEEEEec--CC----H-HHH----HHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhC
Q 020013 96 GEYSEELVLEAHS-AGVKVVPQV--GS----F-DEA----RKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIG 163 (332)
Q Consensus 96 g~~~~~~i~~~~~-~g~~v~~~v--~s----~-~~a----~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~ 163 (332)
|+++++.++.+++ .+++++..+ .+ . +++ ..+....+|+++++.. ||. |....|.+++.+..
T Consensus 100 G~E~~~~~~~l~~~~~~~viKa~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~--GGt--G~~fDW~~~~~~~~--- 172 (228)
T 4aaj_A 100 SNALPQTIDTLKKEFGVFVMKAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTG--AGS--GKLHDLRVSSLVAR--- 172 (228)
T ss_dssp SCCCHHHHHHHHHHHCCEEEEEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC-----------CCCHHHHHHHH---
T ss_pred cccCHHHHHHHhhccCceEEEEEEecccccchhhhHHHHHHHHhccCCCEEccCCC--CCC--cCcCChHHHHHhhh---
Confidence 6678888888876 488887543 21 1 222 2334567999999864 332 34456888877654
Q ss_pred CCCCcEEeecCcCCHHHHHHHHH-cCcceeeecccc
Q 020013 164 DRDIPIIAAGGIVDARGYVAALS-LGAQGICLGTRF 198 (332)
Q Consensus 164 ~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~GT~f 198 (332)
+.|++.|||| +++||.++++ .+..||-+-|.+
T Consensus 173 --~~p~iLAGGL-~peNV~~Ai~~~~P~gVDVsSGV 205 (228)
T 4aaj_A 173 --KIPVIVAGGL-NAENVEEVIKVVKPYGVDVSSGV 205 (228)
T ss_dssp --HSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGG
T ss_pred --cCCeEEECCC-CHHHHHHHHHHhCCCEEEeCCCC
Confidence 5799999999 8999999997 799999999887
No 75
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.27 E-value=2.2e-11 Score=106.86 Aligned_cols=147 Identities=15% Similarity=0.183 Sum_probs=105.6
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccC--CCcHHHHHHHHhCCCEEEEec--CCHHHHHHHHH
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG--EYSEELVLEAHSAGVKVVPQV--GSFDEARKAVN 128 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g--~~~~~~i~~~~~~g~~v~~~v--~s~~~a~~a~~ 128 (332)
+.++++++.++.|+.+.++++++ .+.++.+.+.|+|.|++|.+ ..+.+.++.+++.|.+++..+ ++..+....+.
T Consensus 51 ~~i~~i~~~~~~~~~v~l~v~d~-~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~ 129 (220)
T 2fli_A 51 DVVASMRKHSKLVFDCHLMVVDP-ERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLL 129 (220)
T ss_dssp HHHHHHHTTCCSEEEEEEESSSG-GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGT
T ss_pred HHHHHHHHhCCCCEEEEEeecCH-HHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH
Confidence 44666777777799999998765 34679999999999999853 334566788888898888777 45555555556
Q ss_pred cCCCEEEEecCCCCcccC-CCCchhhhHHHHHHHhC--CCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 129 AGVDAIIVQGREAGGHVI-GQDGLISLLPMVVDLIG--DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 129 ~g~D~ivv~G~eaGGh~~-~~~~~~~ll~~i~~~~~--~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
.++|+|++.+.+.|+... .....+..+.++++... ..++||+++||| +++++.+++.+|||+|.+||++..+
T Consensus 130 ~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI-~~~~~~~~~~~Gad~vvvGsai~~~ 204 (220)
T 2fli_A 130 DLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGV-DNKTIRACYEAGANVFVAGSYLFKA 204 (220)
T ss_dssp TTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSC-CTTTHHHHHHHTCCEEEESHHHHTS
T ss_pred hhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcC-CHHHHHHHHHcCCCEEEEChHHhCC
Confidence 779999886655443210 11122344555554431 115899999999 5899999999999999999999876
No 76
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.27 E-value=6.2e-11 Score=105.45 Aligned_cols=190 Identities=19% Similarity=0.269 Sum_probs=133.9
Q ss_pred CCCcHHHHHHHHhCCCceeecCC-------------CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcC
Q 020013 21 DISGPELVAAVANAGGLGLLRAP-------------DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEK 87 (332)
Q Consensus 21 g~s~~~la~avs~aGglG~i~~~-------------~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~ 87 (332)
-+++++.|....++|...+.... ++.+|+. |+.+++..+.|+---.... +-...+.+.+.|
T Consensus 17 dv~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~----I~~I~~aVsIPVm~k~rig--h~~EAqilea~G 90 (291)
T 3o07_A 17 DVVTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKM----IKDIMNSVSIPVMAKVRIG--HFVEAQIIEALE 90 (291)
T ss_dssp EESSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHH----HHHHHTTCSSCEEEEEETT--CHHHHHHHHHTT
T ss_pred ecCCHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHH----HHHHHHhCCCCeEEEEecC--cHHHHHHHHHcC
Confidence 36899999988889987777542 1224544 5667777778865433332 234566777899
Q ss_pred CcEEEEccCCCcHHHHHHHH--hCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCccc-------------------C
Q 020013 88 VAVLQVSWGEYSEELVLEAH--SAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHV-------------------I 146 (332)
Q Consensus 88 ~~~I~~~~g~~~~~~i~~~~--~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~-------------------~ 146 (332)
+|+|.-+-...|.+.+..++ +.++++++.+.+..||.++.+.|+|.|-..|.-+.|.. .
T Consensus 91 aD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~ 170 (291)
T 3o07_A 91 VDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQL 170 (291)
T ss_dssp CSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTC
T ss_pred CCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcC
Confidence 99996653334444444433 35789999999999999999999999988765222211 0
Q ss_pred -C----------CCchhhhHHHHHHHhCCCCCcE--EeecCcCCHHHHHHHHHcCcceeeeccccccCccCC-CCHHHHH
Q 020013 147 -G----------QDGLISLLPMVVDLIGDRDIPI--IAAGGIVDARGYVAALSLGAQGICLGTRFVASEESY-AHPEYKR 212 (332)
Q Consensus 147 -~----------~~~~~~ll~~i~~~~~~~~iPv--iaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~-~~~~~k~ 212 (332)
. ....|.++.++++.. ++|| |+.|||.+++++..++.+|||||++||+++.++... ....+++
T Consensus 171 ~t~~el~~~a~~~~ad~elI~~Ike~~---~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~ 247 (291)
T 3o07_A 171 KSEDDIAKVAEEMRVPVSLLKDVLEKG---KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVE 247 (291)
T ss_dssp CCHHHHHHHHHHHTSCHHHHHHHHHHT---SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHH
T ss_pred CCHHHhhhcccccCCCHHHHHHHHHcc---CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHH
Confidence 0 024588888888876 7898 568999999999999999999999999999875421 2345555
Q ss_pred HHhcCCC
Q 020013 213 KLVEMDK 219 (332)
Q Consensus 213 ~~~~~~~ 219 (332)
++...++
T Consensus 248 Av~~~~~ 254 (291)
T 3o07_A 248 ATTHFDN 254 (291)
T ss_dssp HHHTTTC
T ss_pred HHHhccC
Confidence 5555544
No 77
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.26 E-value=3.2e-11 Score=107.44 Aligned_cols=144 Identities=21% Similarity=0.246 Sum_probs=107.3
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC--CcHHHHHHHHhCCCEE--EEecC----------
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--YSEELVLEAHSAGVKV--VPQVG---------- 118 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~--~~~~~i~~~~~~g~~v--~~~v~---------- 118 (332)
+.++++++.++.|+-+|..+.. .+.++.+++.|+|.|.++... .|..+.+.++..|..+ ...+.
T Consensus 64 ~~i~~i~~~~~ipv~v~ggi~~--~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~ 141 (244)
T 2y88_A 64 ELLAEVVGKLDVQVELSGGIRD--DESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRG 141 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCS--HHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHhcCCcEEEECCCCC--HHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEE
Confidence 6677787777899999887764 456888999999999987432 2323333344433222 22222
Q ss_pred ---------CHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHc--
Q 020013 119 ---------SFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL-- 187 (332)
Q Consensus 119 ---------s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~-- 187 (332)
..+.++.+.+.|+|.|++.+...+|+..+ ..+.++.++++.+ ++||++.|||.+++++.+++++
T Consensus 142 ~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g--~~~~~~~~l~~~~---~ipvia~GGI~~~~d~~~~~~~~~ 216 (244)
T 2y88_A 142 RGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGG--PNLDLLAGVADRT---DAPVIASGGVSSLDDLRAIATLTH 216 (244)
T ss_dssp GGGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTSC--CCHHHHHHHHTTC---SSCEEEESCCCSHHHHHHHHTTGG
T ss_pred CCccCCCCCHHHHHHHHHhCCCCEEEEEecCCccccCC--CCHHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHhhcc
Confidence 36778889999999999988776665312 3577888888765 7999999999999999999998
Q ss_pred -CcceeeeccccccCcc
Q 020013 188 -GAQGICLGTRFVASEE 203 (332)
Q Consensus 188 -GA~gV~~GT~fl~t~E 203 (332)
||++|++||+|+..+.
T Consensus 217 ~Gad~v~vG~al~~~~~ 233 (244)
T 2y88_A 217 RGVEGAIVGKALYARRF 233 (244)
T ss_dssp GTEEEEEECHHHHTTSS
T ss_pred CCCCEEEEcHHHHCCCc
Confidence 9999999999997654
No 78
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.26 E-value=5.4e-11 Score=107.39 Aligned_cols=152 Identities=16% Similarity=0.116 Sum_probs=104.8
Q ss_pred CHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC--CcHHHHHHHHhCCCEEEEec---CCHH
Q 020013 47 APDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--YSEELVLEAHSAGVKVVPQV---GSFD 121 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~--~~~~~i~~~~~~g~~v~~~v---~s~~ 121 (332)
+++...+.++++|+.++.|+.++...+......++.+.+.|++.|+++... ...++++.+++.|++.+..+ ++.+
T Consensus 78 ~~~~~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e 157 (262)
T 1rd5_A 78 TMDAVLEMLREVTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPED 157 (262)
T ss_dssp CHHHHHHHHHHHGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHH
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHH
Confidence 456667788889888888977653221100012344888999999886221 23467778888898755433 3455
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCC----CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIG----QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~----~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~ 197 (332)
.++.....+.+++.+... .|+++. ....+.+++++++.. ++||++.|||++++++.+++.+|||+|++||+
T Consensus 158 ~~~~~~~~~~g~v~~~s~--~G~tG~~~~~~~~~~~~i~~v~~~~---~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSa 232 (262)
T 1rd5_A 158 RMKEITKASEGFVYLVSV--NGVTGPRANVNPRVESLIQEVKKVT---NKPVAVGFGISKPEHVKQIAQWGADGVIIGSA 232 (262)
T ss_dssp HHHHHHHHCCSCEEEECS--SCCBCTTSCBCTHHHHHHHHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHhcCCCeEEEecC--CCCCCCCcCCCchHHHHHHHHHhhc---CCeEEEECCcCCHHHHHHHHHcCCCEEEEChH
Confidence 556666666676765432 333211 123466888888876 79999999998899999999999999999999
Q ss_pred cccCcc
Q 020013 198 FVASEE 203 (332)
Q Consensus 198 fl~t~E 203 (332)
|+...|
T Consensus 233 i~~~~~ 238 (262)
T 1rd5_A 233 MVRQLG 238 (262)
T ss_dssp HHHHHH
T ss_pred HHhHHH
Confidence 998876
No 79
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.25 E-value=8.4e-11 Score=113.20 Aligned_cols=89 Identities=22% Similarity=0.337 Sum_probs=68.9
Q ss_pred CCE-EEEecC---CHHH----HHHHHHcCCCEEEEecC------------CCCcccCCC---CchhhhHHHHHHHhCCCC
Q 020013 110 GVK-VVPQVG---SFDE----ARKAVNAGVDAIIVQGR------------EAGGHVIGQ---DGLISLLPMVVDLIGDRD 166 (332)
Q Consensus 110 g~~-v~~~v~---s~~~----a~~a~~~g~D~ivv~G~------------eaGGh~~~~---~~~~~ll~~i~~~~~~~~ 166 (332)
.++ |+.++. +.++ |+.+++.|+|+|++.|. +.||+. |. ...+.+++++++.+.. +
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlS-G~~~~~~sl~~i~~v~~~v~~-~ 373 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVS-GAKLKDISTKFICEMYNYTNK-Q 373 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEE-EHHHHHHHHHHHHHHHHHTTT-C
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcC-CCcchHHHHHHHHHHHHHcCC-C
Confidence 456 676654 2233 67788999999999875 235554 22 1236778888887742 6
Q ss_pred CcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 167 IPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 167 iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
+|||+.|||.+++++.+++.+|||+|++||+|+.
T Consensus 374 iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~ 407 (443)
T 1tv5_A 374 IPIIASGGIFSGLDALEKIEAGASVCQLYSCLVF 407 (443)
T ss_dssp SCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHH
T ss_pred CcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHh
Confidence 9999999999999999999999999999999986
No 80
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.24 E-value=1.2e-10 Score=104.98 Aligned_cols=152 Identities=17% Similarity=0.190 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHhh-cCCcEEEEeecC----CCCHHHHHHHHhcCCcEEEEccCCCc---HHHHHHHHhCCCEEEEec--
Q 020013 48 PDYLRDLIRKTRSL-TERPFGVGVVLA----FPHNENIKAILSEKVAVLQVSWGEYS---EELVLEAHSAGVKVVPQV-- 117 (332)
Q Consensus 48 ~e~~~~~i~~~r~~-~~~p~gvnl~~~----~~~~~~~~~~~~~~~~~I~~~~g~~~---~~~i~~~~~~g~~v~~~v-- 117 (332)
.+.+-+.++++|+. ++.|+.+-...+ ...+.+++.+.+.|+|.+.++ ..++ .++.+.+++.|+..+..+
T Consensus 79 ~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~-Dlp~ee~~~~~~~~~~~gl~~i~liaP 157 (267)
T 3vnd_A 79 SSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIA-DVPVEESAPFSKAAKAHGIAPIFIAPP 157 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET-TSCGGGCHHHHHHHHHTTCEEECEECT
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeC-CCCHhhHHHHHHHHHHcCCeEEEEECC
Confidence 34456777888876 678866532222 123667889999999999987 3333 367888899999866433
Q ss_pred -CCHHHHHHHHHcCCCEEEEecCC--CCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeee
Q 020013 118 -GSFDEARKAVNAGVDAIIVQGRE--AGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 118 -~s~~~a~~a~~~g~D~ivv~G~e--aGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~ 194 (332)
++.+.++...+.+.++|.+.... .|....-......++.++++.. ++||++.|||++++++.+++..|||||++
T Consensus 158 ~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~---~~pv~vGfGI~~~e~~~~~~~~gADgvVV 234 (267)
T 3vnd_A 158 NADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN---APPPLLGFGIAEPEQVRAAIKAGAAGAIS 234 (267)
T ss_dssp TCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT---CCCEEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc---CCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 35677777777766666652221 1221101223467788887765 79999999999999999899999999999
Q ss_pred ccccccCcc
Q 020013 195 GTRFVASEE 203 (332)
Q Consensus 195 GT~fl~t~E 203 (332)
||+|+..-|
T Consensus 235 GSaiv~~i~ 243 (267)
T 3vnd_A 235 GSAVVKIIE 243 (267)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999986544
No 81
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=99.24 E-value=9.2e-11 Score=105.98 Aligned_cols=151 Identities=20% Similarity=0.205 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHhh-cCCcEEEE----eecCCCCHHHHHHHHhcCCcEEEEccCCCc---HHHHHHHHhCCCEEEEec---
Q 020013 49 DYLRDLIRKTRSL-TERPFGVG----VVLAFPHNENIKAILSEKVAVLQVSWGEYS---EELVLEAHSAGVKVVPQV--- 117 (332)
Q Consensus 49 e~~~~~i~~~r~~-~~~p~gvn----l~~~~~~~~~~~~~~~~~~~~I~~~~g~~~---~~~i~~~~~~g~~v~~~v--- 117 (332)
+.+-+.++++|+. .+.|+.+- .+.....+.+++.+.+.|+|.+.+. +.++ .++.+.+++.|+..+..+
T Consensus 82 ~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip-Dlp~ee~~~~~~~~~~~gl~~I~lvap~ 160 (271)
T 3nav_A 82 DICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIA-DVPTNESQPFVAAAEKFGIQPIFIAPPT 160 (271)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEET-TSCGGGCHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEEC-CCCHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 3445677888875 67888763 2222334678899999999998886 3333 357778889998755433
Q ss_pred CCHHHHHHHHHcCCCEEEEecC-CCCcccCC-CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeec
Q 020013 118 GSFDEARKAVNAGVDAIIVQGR-EAGGHVIG-QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 195 (332)
Q Consensus 118 ~s~~~a~~a~~~g~D~ivv~G~-eaGGh~~~-~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~G 195 (332)
++.+.++...+.+.++|.+... .-.|.... +.....++.++++.. ++||++.+||++++++.+++..|||||++|
T Consensus 161 t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~---~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 161 ASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD---APPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp CCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT---CCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3567777777777777765322 11222111 122456788887765 799999999999999998999999999999
Q ss_pred cccccCcc
Q 020013 196 TRFVASEE 203 (332)
Q Consensus 196 T~fl~t~E 203 (332)
|+|+..-|
T Consensus 238 SAiv~~i~ 245 (271)
T 3nav_A 238 SAVVKIIE 245 (271)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99986544
No 82
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=99.24 E-value=6.5e-11 Score=104.74 Aligned_cols=146 Identities=15% Similarity=0.171 Sum_probs=110.1
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC---CcHHHHHHHHhCCCEEEEecC--CHHHHHHHH
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE---YSEELVLEAHSAGVKVVPQVG--SFDEARKAV 127 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~---~~~~~i~~~~~~g~~v~~~v~--s~~~a~~a~ 127 (332)
..++.+|+.++.|+-+.+++.+| ..+++.+.++|+|.|++|... .+.+.++.+++.|+++...+. ++.+....+
T Consensus 47 ~~v~~lr~~~~~~~dvhLmv~dp-~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~ 125 (231)
T 3ctl_A 47 FFVSQVKKLATKPLDCHLMVTRP-QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYY 125 (231)
T ss_dssp HHHHHHHTTCCSCEEEEEESSCG-GGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTT
T ss_pred HHHHHHHhccCCcEEEEEEecCH-HHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHH
Confidence 35778888888999999999876 567899999999999998543 356788899999999876553 444444444
Q ss_pred HcCCCEEEEecC--CCCcccCCCCchhhhHHHHHHHhC--CCCCcEEeecCcCCHHHHHHHHHcCcceeeec-cccccC
Q 020013 128 NAGVDAIIVQGR--EAGGHVIGQDGLISLLPMVVDLIG--DRDIPIIAAGGIVDARGYVAALSLGAQGICLG-TRFVAS 201 (332)
Q Consensus 128 ~~g~D~ivv~G~--eaGGh~~~~~~~~~ll~~i~~~~~--~~~iPviaaGGI~~~~~v~~al~~GA~gV~~G-T~fl~t 201 (332)
..++|.|++-.. ..||... ....+..+.++++... +.+++|.+.||| +.+++..+..+|||.+++| |+++.+
T Consensus 126 l~~~D~VlvmsV~pGfggQ~f-~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI-~~~~~~~~~~aGAd~~V~G~saif~~ 202 (231)
T 3ctl_A 126 IHKADKITVMTVDPGFAGQPF-IPEMLDKLAELKAWREREGLEYEIEVDGSC-NQATYEKLMAAGADVFIVGTSGLFNH 202 (231)
T ss_dssp GGGCSEEEEESSCTTCSSCCC-CTTHHHHHHHHHHHHHHHTCCCEEEEESCC-STTTHHHHHHHTCCEEEECTTTTGGG
T ss_pred HhcCCEEEEeeeccCcCCccc-cHHHHHHHHHHHHHHhccCCCceEEEECCc-CHHHHHHHHHcCCCEEEEccHHHhCC
Confidence 458999987443 3445442 2345666777666542 125899999999 7899999999999999999 888764
No 83
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.23 E-value=9.8e-11 Score=111.42 Aligned_cols=137 Identities=18% Similarity=0.248 Sum_probs=95.9
Q ss_pred CCcEEEEeecCCC----CHHHHHHH--HhcCCcEEEEccCCCc----------H---HHHHHHHhC--------------
Q 020013 63 ERPFGVGVVLAFP----HNENIKAI--LSEKVAVLQVSWGEYS----------E---ELVLEAHSA-------------- 109 (332)
Q Consensus 63 ~~p~gvnl~~~~~----~~~~~~~~--~~~~~~~I~~~~g~~~----------~---~~i~~~~~~-------------- 109 (332)
..|+++|+..+.. .+++++.+ +..-+|+|.++.++|. . ++++.+++.
T Consensus 181 ~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~ 260 (415)
T 3i65_A 181 KHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEF 260 (415)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHH
T ss_pred CceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 4679999977652 13343322 2234899999877642 1 334444432
Q ss_pred -------CCE-EEEecC---C----HHHHHHHHHcCCCEEEEecCC------------CCcccCCC---CchhhhHHHHH
Q 020013 110 -------GVK-VVPQVG---S----FDEARKAVNAGVDAIIVQGRE------------AGGHVIGQ---DGLISLLPMVV 159 (332)
Q Consensus 110 -------g~~-v~~~v~---s----~~~a~~a~~~g~D~ivv~G~e------------aGGh~~~~---~~~~~ll~~i~ 159 (332)
.++ |+.++. + .+.|+.+++.|+|+|++.|+. .||.. |. ...+..+++++
T Consensus 261 ~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlS-G~a~~p~al~~I~~v~ 339 (415)
T 3i65_A 261 LWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVS-GAKLKDISTKFICEMY 339 (415)
T ss_dssp HCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEE-EGGGHHHHHHHHHHHH
T ss_pred cccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcC-CccchHHHHHHHHHHH
Confidence 467 776654 2 234667889999999998753 35553 22 12467888888
Q ss_pred HHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 160 DLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 160 ~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
+.+.. ++|||+.|||.+++|+.+++.+|||+|++||+|+..
T Consensus 340 ~~v~~-~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~ 380 (415)
T 3i65_A 340 NYTNK-QIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFN 380 (415)
T ss_dssp HHTTT-CSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHH
T ss_pred HHhCC-CCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc
Confidence 88743 699999999999999999999999999999999854
No 84
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.22 E-value=6.4e-11 Score=107.04 Aligned_cols=198 Identities=17% Similarity=0.125 Sum_probs=119.4
Q ss_pred CccceecCCCCCCCCcH-HHHHHHHhCCCce-eecCCCCCCH--HHHHHHHHHHHhhcCCcEEEEeecCCCCHH---HHH
Q 020013 9 FEYGIVQAPLGPDISGP-ELVAAVANAGGLG-LLRAPDWEAP--DYLRDLIRKTRSLTERPFGVGVVLAFPHNE---NIK 81 (332)
Q Consensus 9 ~~~Pii~apM~~g~s~~-~la~avs~aGglG-~i~~~~~~~~--e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~---~~~ 81 (332)
++.|+|.|.-+ ..++ ++..++.++|.-- .++.++ .++ ..+...++.+++. +.++-.|.......++ ..+
T Consensus 11 ~~~~~~~~t~g--~p~~~~~~~~l~~~Gad~ielg~pr-~~~~g~~~~~~~~~l~~~-~~~~~pn~~~~~~~~~~~~f~~ 86 (264)
T 1xm3_A 11 FQSRLLLGTGK--YPSFDIQKEAVAVSESDILTFAVRR-MNIFEASQPNFLEQLDLS-KYTLLPNTAGASTAEEAVRIAR 86 (264)
T ss_dssp ESCCEEEECSC--SSCHHHHHHHHHHHTCSEEEEETTS-STTC-------CTTCCGG-GSEEEEECTTCSSHHHHHHHHH
T ss_pred ecCCCEEEecC--CCCHHHHHHHHHHcCCeEEEEcccc-cccCCCCHHHHHHHHHhc-CCeEcCCccccCCHHHHHHHHH
Confidence 57899987753 4444 5666676666311 222221 122 1223333333322 3344456543222232 345
Q ss_pred HHHhc-CCcEEEEc-cCCC------cHHHHHHHHhC---CCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCC
Q 020013 82 AILSE-KVAVLQVS-WGEY------SEELVLEAHSA---GVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQD 149 (332)
Q Consensus 82 ~~~~~-~~~~I~~~-~g~~------~~~~i~~~~~~---g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~ 149 (332)
.+.+. +.++|.+. .++. ..++++.+++. |+.++ ..+.+.++++++.+.|+|+|+..+...|... + .
T Consensus 87 ~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~~-~-~ 164 (264)
T 1xm3_A 87 LAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSGQ-G-I 164 (264)
T ss_dssp HHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCCC-C-C
T ss_pred HHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCCC-C-C
Confidence 55554 45666553 2222 23677777776 88888 5567889999999999999965444333222 1 1
Q ss_pred chhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccC-CCCHHHHHHHh
Q 020013 150 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEES-YAHPEYKRKLV 215 (332)
Q Consensus 150 ~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es-~~~~~~k~~~~ 215 (332)
....+++.+++.. ++||++.|||.+++++.+++++|||||++||+|+.+.+. .....+++.+.
T Consensus 165 ~~~~~l~~i~~~~---~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l~~~v~ 228 (264)
T 1xm3_A 165 LNPLNLSFIIEQA---KVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAVE 228 (264)
T ss_dssp SCHHHHHHHHHHC---SSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcC---CCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHHHHH
Confidence 2366788887755 799999999999999999999999999999999976542 12334444443
No 85
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.22 E-value=4.7e-10 Score=100.40 Aligned_cols=172 Identities=20% Similarity=0.205 Sum_probs=117.0
Q ss_pred cHHHHHHHHhCCC--ceeecCC-CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC--C
Q 020013 24 GPELVAAVANAGG--LGLLRAP-DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--Y 98 (332)
Q Consensus 24 ~~~la~avs~aGg--lG~i~~~-~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~--~ 98 (332)
..+++.+..++|. +-+.... .........+.++++++.++.|+-++-.+.. .+.++.+++.|+|.|.++... .
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~~--~~~~~~~~~~Gad~V~lg~~~l~~ 109 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHD--FETASELILRGADKVSINTAAVEN 109 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEEESSCCS--HHHHHHHHHTTCSEEEESHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEEeCCCCC--HHHHHHHHHcCCCEEEEChHHHhC
Confidence 3467777777664 2222211 1111223345667777777889988877654 466888889999999986321 2
Q ss_pred cHHHHHHHHhCCC---EEEEec--------------------CCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhH
Q 020013 99 SEELVLEAHSAGV---KVVPQV--------------------GSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLL 155 (332)
Q Consensus 99 ~~~~i~~~~~~g~---~v~~~v--------------------~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll 155 (332)
|..+.+..+..|. .+...+ +..+.++.+.+.|+|.|++.+....|+..+ ..+.++
T Consensus 110 p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g--~~~~~~ 187 (253)
T 1thf_D 110 PSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSG--YDTEMI 187 (253)
T ss_dssp THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSCSC--CCHHHH
T ss_pred hHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCCCC--CCHHHH
Confidence 3323333344342 233333 234667889999999999987655554322 247788
Q ss_pred HHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCc
Q 020013 156 PMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 156 ~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
.++++.+ ++||++.|||.+++++.+++.+||++|++||+|+..+
T Consensus 188 ~~l~~~~---~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~~ 231 (253)
T 1thf_D 188 RFVRPLT---TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFRE 231 (253)
T ss_dssp HHHGGGC---CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTC
T ss_pred HHHHHhc---CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcCC
Confidence 8888765 7999999999999999999999999999999999754
No 86
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.22 E-value=8.3e-11 Score=110.28 Aligned_cols=191 Identities=15% Similarity=0.143 Sum_probs=123.3
Q ss_pred hhcC--CccceecCCCCCCCCcHHHHHHHHhCCCceeecCC---------C-----------------C--CCHHHHHHH
Q 020013 5 GMLG--FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAP---------D-----------------W--EAPDYLRDL 54 (332)
Q Consensus 5 ~~l~--~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~---------~-----------------~--~~~e~~~~~ 54 (332)
+++| ++.||+.+.=. .-.+.+....+..+| +|++..+ + + ...+.+.+.
T Consensus 40 ~~~Gl~~~NPv~lAAG~-~~~~~e~~~~l~~~G-~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~ 117 (354)
T 4ef8_A 40 NLLNNTFANPFMNAAGV-MCTTTEELVAMTESA-SGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAY 117 (354)
T ss_dssp EETTEEESSSEEECTTS-SCSSHHHHHHHHHSS-CSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHH
T ss_pred EECCEECCCCCEeccCC-CCCCHHHHHHHHHcC-CCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHH
Confidence 3445 57899977643 225788888888775 5555211 0 0 123444444
Q ss_pred HHHHHhhcCCcEEEEeecCCCCHHHH---HHHH---hcCCcEEEEccCCC-----------cH---HHHHHHHh-CCCEE
Q 020013 55 IRKTRSLTERPFGVGVVLAFPHNENI---KAIL---SEKVAVLQVSWGEY-----------SE---ELVLEAHS-AGVKV 113 (332)
Q Consensus 55 i~~~r~~~~~p~gvnl~~~~~~~~~~---~~~~---~~~~~~I~~~~g~~-----------~~---~~i~~~~~-~g~~v 113 (332)
+++.++..+.|+++|++...+ +++. +.+. +.++|+|.+++++| ++ ++++.+++ ..++|
T Consensus 118 l~~~~~~~~~pvivsI~G~~~-~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV 196 (354)
T 4ef8_A 118 AAEQHDYGKKPLFLSMSGLSM-RENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSF 196 (354)
T ss_dssp HHHTCCTTTCCEEEEECCSSH-HHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCE
T ss_pred HHHHhhcCCCcEEEEeccCCH-HHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCe
Confidence 444433346899999987554 3333 3333 35789999987753 12 34444554 46888
Q ss_pred EEecC---CHHHH----HHHHHcC-CCEEEEecC--------------------CCCcccCCC---CchhhhHHHHHHHh
Q 020013 114 VPQVG---SFDEA----RKAVNAG-VDAIIVQGR--------------------EAGGHVIGQ---DGLISLLPMVVDLI 162 (332)
Q Consensus 114 ~~~v~---s~~~a----~~a~~~g-~D~ivv~G~--------------------eaGGh~~~~---~~~~~ll~~i~~~~ 162 (332)
+.++. +.++. ..+.+.| +|+|++.++ +.||.. |+ ...+..+.++++..
T Consensus 197 ~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlS-G~~i~p~a~~~i~~v~~~~ 275 (354)
T 4ef8_A 197 GVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLG-GRYVLPTALANINAFYRRC 275 (354)
T ss_dssp EEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEE-GGGGHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCC-CCCCchHHHHHHHHHHHhC
Confidence 87765 33332 2334677 999987432 123332 22 12477788888874
Q ss_pred CCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 163 GDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 163 ~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
. ++|||+.|||.+++|+.+++.+|||+|++||+++..
T Consensus 276 ~--~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~ 312 (354)
T 4ef8_A 276 P--GKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEE 312 (354)
T ss_dssp T--TSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHH
T ss_pred C--CCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHh
Confidence 2 699999999999999999999999999999999864
No 87
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.22 E-value=1.6e-10 Score=108.92 Aligned_cols=136 Identities=19% Similarity=0.244 Sum_probs=97.0
Q ss_pred CCcEEEEeecCCC----CHHHHHHHHh--cCCcEEEEccCCCc-------------HHHHHHHHh--------CCCEEEE
Q 020013 63 ERPFGVGVVLAFP----HNENIKAILS--EKVAVLQVSWGEYS-------------EELVLEAHS--------AGVKVVP 115 (332)
Q Consensus 63 ~~p~gvnl~~~~~----~~~~~~~~~~--~~~~~I~~~~g~~~-------------~~~i~~~~~--------~g~~v~~ 115 (332)
+.|+++|+..+.. .+++++.+.. ..+|+|.++.++|. .++++.+++ ..++|+.
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~v 225 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLV 225 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEE
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEE
Confidence 5799999977531 1344443332 35899999888752 134444443 4678887
Q ss_pred ecC---CH----HHHHHHHHcCCCEEEEecCC--------------CCcccCCC-C--chhhhHHHHHHHhCCCCCcEEe
Q 020013 116 QVG---SF----DEARKAVNAGVDAIIVQGRE--------------AGGHVIGQ-D--GLISLLPMVVDLIGDRDIPIIA 171 (332)
Q Consensus 116 ~v~---s~----~~a~~a~~~g~D~ivv~G~e--------------aGGh~~~~-~--~~~~ll~~i~~~~~~~~iPvia 171 (332)
++. +. +.++.++++|+|+|++.++. .||.. |. . ..+..+.++++.++. ++|||+
T Consensus 226 Ki~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlS-G~~i~p~a~~~v~~i~~~v~~-~ipvI~ 303 (367)
T 3zwt_A 226 KIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLS-GKPLRDLSTQTIREMYALTQG-RVPIIG 303 (367)
T ss_dssp EECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEE-EGGGHHHHHHHHHHHHHHTTT-CSCEEE
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcC-CcccchhHHHHHHHHHHHcCC-CceEEE
Confidence 765 22 34567789999999997653 24443 22 1 235778888888743 699999
Q ss_pred ecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 172 AGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 172 aGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
.|||.+++++.+++.+|||+|++||+++.
T Consensus 304 ~GGI~s~~da~~~l~~GAd~V~vgra~l~ 332 (367)
T 3zwt_A 304 VGGVSSGQDALEKIRAGASLVQLYTALTF 332 (367)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred ECCCCCHHHHHHHHHcCCCEEEECHHHHh
Confidence 99999999999999999999999999974
No 88
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=99.22 E-value=1e-10 Score=103.39 Aligned_cols=143 Identities=17% Similarity=0.243 Sum_probs=105.9
Q ss_pred HHHHHHhh--cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccC--CCcHHHHHHHHhCCCEEEEecC---CHHHHHHH
Q 020013 54 LIRKTRSL--TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG--EYSEELVLEAHSAGVKVVPQVG---SFDEARKA 126 (332)
Q Consensus 54 ~i~~~r~~--~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g--~~~~~~i~~~~~~g~~v~~~v~---s~~~a~~a 126 (332)
.++.+|+. ++.|+.++++++++ ..+++.+.+.|+|.|++|.. ....+.++.+++.|+++...+. +.+..+.
T Consensus 53 ~v~~ir~~~~~~~~~dvhLmv~~p-~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~- 130 (228)
T 3ovp_A 53 VVESLRKQLGQDPFFDMHMMVSKP-EQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAP- 130 (228)
T ss_dssp HHHHHHHHHCSSSCEEEEEECSCG-GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGG-
T ss_pred HHHHHHHhhCCCCcEEEEEEeCCH-HHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHH-
Confidence 35566665 57899999999877 56889999999999999953 2345788999999999877664 3333333
Q ss_pred HHcCCCEEEEecCC--CCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCc
Q 020013 127 VNAGVDAIIVQGRE--AGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 127 ~~~g~D~ivv~G~e--aGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
+...+|+|.+-..+ .||... ....+..++++++... ++|+.++||| +++++.++..+|||.+++||+++.++
T Consensus 131 ~l~~~D~Vl~msv~pGf~Gq~f-~~~~l~ki~~lr~~~~--~~~I~VdGGI-~~~t~~~~~~aGAd~~VvGsaIf~a~ 204 (228)
T 3ovp_A 131 WANQIDMALVMTVEPGFGGQKF-MEDMMPKVHWLRTQFP--SLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSE 204 (228)
T ss_dssp GGGGCSEEEEESSCTTTCSCCC-CGGGHHHHHHHHHHCT--TCEEEEESSC-STTTHHHHHHHTCCEEEESHHHHTCS
T ss_pred HhccCCeEEEeeecCCCCCccc-CHHHHHHHHHHHHhcC--CCCEEEeCCc-CHHHHHHHHHcCCCEEEEeHHHhCCC
Confidence 33358999875433 344432 1234566777776543 6899999999 79999999999999999999988654
No 89
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.21 E-value=8.5e-10 Score=98.18 Aligned_cols=183 Identities=19% Similarity=0.215 Sum_probs=120.4
Q ss_pred cHHHHHHHHhCCCceeec--CC-CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC--C
Q 020013 24 GPELVAAVANAGGLGLLR--AP-DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--Y 98 (332)
Q Consensus 24 ~~~la~avs~aGglG~i~--~~-~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~--~ 98 (332)
..+++.++.++|.=.+.. .. .........+.++++++.++.|+-++-.+.. .+.++.+.+.|+|.|.++... .
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~--~~~~~~~~~~Gad~V~i~~~~~~~ 112 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRS--LEDATTLFRAGADKVSVNTAAVRN 112 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEEESSCCS--HHHHHHHHHHTCSEEEESHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEEECCCCC--HHHHHHHHHcCCCEEEEChHHhhC
Confidence 356777776666322221 11 1112223455677777777889888766643 456678888999999986321 1
Q ss_pred cHHHHHHHHhCCC---EEEEec--------------------CCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhH
Q 020013 99 SEELVLEAHSAGV---KVVPQV--------------------GSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLL 155 (332)
Q Consensus 99 ~~~~i~~~~~~g~---~v~~~v--------------------~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll 155 (332)
|..+.+..+..|. .+...+ +..+.++.+.+.|+|+|++.+...+|+..+ ..+.++
T Consensus 113 ~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~--~~~~~i 190 (253)
T 1h5y_A 113 PQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLG--YDVELI 190 (253)
T ss_dssp THHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSC--CCHHHH
T ss_pred cHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCc--CCHHHH
Confidence 3323333444442 222221 235668888899999999988766665322 346778
Q ss_pred HHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHHHh
Q 020013 156 PMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLV 215 (332)
Q Consensus 156 ~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~ 215 (332)
.++++.. ++||++.|||.+++++.+++.+||++|++||+|+..... .+..++.+.
T Consensus 191 ~~l~~~~---~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~--~~~~~~~l~ 245 (253)
T 1h5y_A 191 RRVADSV---RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLS--IAQVKRYLK 245 (253)
T ss_dssp HHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSC--HHHHHHHHH
T ss_pred HHHHHhc---CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCC--HHHHHHHHH
Confidence 8888776 799999999988999999999999999999999876432 344455443
No 90
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.19 E-value=8.9e-10 Score=98.53 Aligned_cols=172 Identities=23% Similarity=0.267 Sum_probs=116.2
Q ss_pred cHHHHHHHHhCCC--ceeecCC-CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC--C
Q 020013 24 GPELVAAVANAGG--LGLLRAP-DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--Y 98 (332)
Q Consensus 24 ~~~la~avs~aGg--lG~i~~~-~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~--~ 98 (332)
..+++.+..++|. +-+.... .........+.++++++.++.|+-++-.+.. .+.++.+++.|+|.|.+.... .
T Consensus 33 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~--~~~~~~~~~~Gad~V~lg~~~l~~ 110 (252)
T 1ka9_F 33 PVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTVGGGVRS--LEDARKLLLSGADKVSVNSAAVRR 110 (252)
T ss_dssp HHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEEESSCCS--HHHHHHHHHHTCSEEEECHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCCEEEECCcCC--HHHHHHHHHcCCCEEEEChHHHhC
Confidence 3467777777663 2222111 1122233445677787777888887655443 567888888999999986321 1
Q ss_pred cHHHHHHHHhCC---CEEEEec--------------------CCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhH
Q 020013 99 SEELVLEAHSAG---VKVVPQV--------------------GSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLL 155 (332)
Q Consensus 99 ~~~~i~~~~~~g---~~v~~~v--------------------~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll 155 (332)
|..+.+..+..+ +.+...+ ++.+.++.+.+.|++.|++.+....|+..+ ..+.++
T Consensus 111 p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g--~~~~~i 188 (252)
T 1ka9_F 111 PELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKEG--YDLRLT 188 (252)
T ss_dssp THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCSC--CCHHHH
T ss_pred cHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcCC--CCHHHH
Confidence 222222233333 2333333 236778889999999999976654454322 248889
Q ss_pred HHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCc
Q 020013 156 PMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 156 ~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
.++++.+ ++|||+.|||.+++++.+++.+|||||++||+|+..+
T Consensus 189 ~~l~~~~---~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~ 232 (252)
T 1ka9_F 189 RMVAEAV---GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFGE 232 (252)
T ss_dssp HHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTS
T ss_pred HHHHHHc---CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCC
Confidence 9998877 7999999999999999999999999999999999764
No 91
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=99.19 E-value=7.1e-11 Score=113.72 Aligned_cols=162 Identities=19% Similarity=0.176 Sum_probs=119.3
Q ss_pred CCCcHHHHHHHHhCC--CceeecC---CCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc
Q 020013 21 DISGPELVAAVANAG--GLGLLRA---PDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW 95 (332)
Q Consensus 21 g~s~~~la~avs~aG--glG~i~~---~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~ 95 (332)
|+++++.+.+++++| .+||+.. +++.+++..+++++. ....-|++|++.+.++..+.+.+.+.++|++|
T Consensus 261 Git~~eda~~a~~~Gad~iGfIf~~~SpR~V~~~~a~~i~~~-----~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQLH- 334 (452)
T 1pii_A 261 GLTRGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVMAA-----APLQYVGVFRNHDIADVVDKAKVLSLAAVQLH- 334 (452)
T ss_dssp CCCSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHH-----CCCEEEEEESSCCHHHHHHHHHHHTCSEEEEC-
T ss_pred CCCcHHHHHHHHhcCCCEEEeecCCCCCCCCCHHHHHHHHhc-----CCCCEEEEEeCCCHHHHHHHHHhcCCCEEEEC-
Confidence 689999999999998 5999953 466788887776665 13456889998876666777778899999999
Q ss_pred CCCcHHHHHHHHhC---CCEEEEecCCHHHHHHHHHc-CCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe
Q 020013 96 GEYSEELVLEAHSA---GVKVVPQVGSFDEARKAVNA-GVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA 171 (332)
Q Consensus 96 g~~~~~~i~~~~~~---g~~v~~~v~s~~~a~~a~~~-g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia 171 (332)
|++++++++.++.. ++++|..+.-.+.... ... .+|+++++.. .||. |....|.+++.. . +.|++.
T Consensus 335 G~E~~~~~~~l~~~~p~~~~iika~~v~~~~~~-~~~~~~d~~LlD~~-~GGt--G~~fdW~~l~~~---~---~~p~iL 404 (452)
T 1pii_A 335 GNEEQLYIDTLREALPAHVAIWKALSVGETLPA-REFQHVDKYVLDNG-QGGS--GQRFDWSLLNGQ---S---LGNVLL 404 (452)
T ss_dssp SCCCHHHHHHHHHHSCTTSEEEEEEECSSSCCC-CCCTTCCEEEEESC-SCCS--SCCCCGGGGTTS---C---CTTEEE
T ss_pred CCCCHHHHHHHHhhccCCCcEEEEEecCCccch-hhhhcccEEEecCC-CCCC--CCccCHHHhhcc---c---CCcEEE
Confidence 67788899988763 6788854321111101 111 5899999863 2443 444568777531 1 579999
Q ss_pred ecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 172 AGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 172 aGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
+||| +++|+.+++..++.||-+-|.+=
T Consensus 405 AGGL-~p~NV~~ai~~~p~gvDvsSGVE 431 (452)
T 1pii_A 405 AGGL-GADNCVEAAQTGCAGLDFNSAVE 431 (452)
T ss_dssp ESSC-CTTTHHHHHTTCCSEEEECGGGE
T ss_pred EcCC-CHHHHHHHHhcCCCEEEeCCcee
Confidence 9999 89999999999999999988864
No 92
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.18 E-value=3.2e-10 Score=105.96 Aligned_cols=191 Identities=15% Similarity=0.156 Sum_probs=118.8
Q ss_pred hhcC--CccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCC----------------------------CCHHHHHHH
Q 020013 5 GMLG--FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDW----------------------------EAPDYLRDL 54 (332)
Q Consensus 5 ~~l~--~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~----------------------------~~~e~~~~~ 54 (332)
+++| ++.||+.+.=. .-.+.+....+..+| +|++..++. ...|.+.+.
T Consensus 41 ~~~Gl~~~NPv~lAaG~-~~~~~e~~~~~~~~G-~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~~ 118 (345)
T 3oix_A 41 TIGSFDFDNCLMNAAGV-YCMTREELAAIDHSE-AGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLDY 118 (345)
T ss_dssp EETTEEESCSEEECTTS-SCSSHHHHHHHHTSS-CSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHHH
T ss_pred EECCEECCCCCEEcCCC-CCCCHHHHHHHHHcC-CCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHHH
Confidence 3445 57899977532 124678888887765 666643210 012334444
Q ss_pred HHHH-HhhcCCcEEEEeecCCCCHHHH---HHHHhcCCc-EEEEccCCC-----------cH---HHHHHHHhC-CCEEE
Q 020013 55 IRKT-RSLTERPFGVGVVLAFPHNENI---KAILSEKVA-VLQVSWGEY-----------SE---ELVLEAHSA-GVKVV 114 (332)
Q Consensus 55 i~~~-r~~~~~p~gvnl~~~~~~~~~~---~~~~~~~~~-~I~~~~g~~-----------~~---~~i~~~~~~-g~~v~ 114 (332)
+... +...+.|+++|+....+ +++. +.+.+.+.+ +|.+++++| ++ ++++.+++. .++|+
T Consensus 119 l~~~~~~~~~~pvivsI~g~~~-~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~ 197 (345)
T 3oix_A 119 VTELQKQPDSKNHFLSLVGMSP-EETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLG 197 (345)
T ss_dssp HHHHHHSTTCCCCEEEECCSSH-HHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEE
T ss_pred HHHHhhccCCCCEEEEecCCCH-HHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeE
Confidence 4432 23357899999987543 3443 334445766 999987753 12 334444443 67888
Q ss_pred EecC---CH-HHHHHHHHcCCCEEEE-------------ec--------CCCCcccCCCC---chhhhHHHHHHHhCCCC
Q 020013 115 PQVG---SF-DEARKAVNAGVDAIIV-------------QG--------REAGGHVIGQD---GLISLLPMVVDLIGDRD 166 (332)
Q Consensus 115 ~~v~---s~-~~a~~a~~~g~D~ivv-------------~G--------~eaGGh~~~~~---~~~~ll~~i~~~~~~~~ 166 (332)
.++. +. +-++.+..+|+|.|.+ .. .+.||.. |+. ..+..+.++++.++. +
T Consensus 198 vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlS-G~ai~p~a~~~v~~i~~~~~~-~ 275 (345)
T 3oix_A 198 IKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIG-GDYVKPTALANVHAFYKRLNP-S 275 (345)
T ss_dssp EEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEE-EGGGHHHHHHHHHHHHTTSCT-T
T ss_pred EEECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcC-CccccHHHHHHHHHHHHHcCC-C
Confidence 7765 33 3455566666665432 11 1234433 221 126678888877632 6
Q ss_pred CcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 167 IPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 167 iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
+|||+.|||.+++++.+++.+|||+|++||+|+.
T Consensus 276 ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~ 309 (345)
T 3oix_A 276 IQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQ 309 (345)
T ss_dssp SEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred CcEEEECCCCChHHHHHHHHhCCCEEEEChHHHh
Confidence 9999999999999999999999999999999654
No 93
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=99.18 E-value=1.6e-10 Score=102.87 Aligned_cols=145 Identities=14% Similarity=0.223 Sum_probs=107.3
Q ss_pred HHHHHHhhc-CCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccC--CCcHHHHHHHHhCCCEEEEecC--C-HHHHHHHH
Q 020013 54 LIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG--EYSEELVLEAHSAGVKVVPQVG--S-FDEARKAV 127 (332)
Q Consensus 54 ~i~~~r~~~-~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g--~~~~~~i~~~~~~g~~v~~~v~--s-~~~a~~a~ 127 (332)
.++.+|+.+ +.|+.+.+++.++ ..+++.+.++|+|.|++|.. ..+.+.++.+++.|+++...+. + .+.++..
T Consensus 76 ~v~~lr~~~p~~~ldvHLmv~~p-~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~- 153 (246)
T 3inp_A 76 VLKALRDYGITAGMDVHLMVKPV-DALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYV- 153 (246)
T ss_dssp HHHHHHHHTCCSCEEEEEECSSC-HHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTT-
T ss_pred HHHHHHHhCCCCeEEEEEeeCCH-HHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-
Confidence 466677777 8999999999887 67899999999999999853 2455788999999999876653 3 3333333
Q ss_pred HcCCCEEEEec--CCCCcccCCCCchhhhHHHHHHHhC--CCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCc
Q 020013 128 NAGVDAIIVQG--REAGGHVIGQDGLISLLPMVVDLIG--DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 128 ~~g~D~ivv~G--~eaGGh~~~~~~~~~ll~~i~~~~~--~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
...+|+|++-. +..||..+. ...+..++++++... +.++++.++||| +.+++.++.++|||.+++||++..++
T Consensus 154 l~~vD~VlvMsV~PGfgGQ~fi-~~~l~KI~~lr~~~~~~~~~~~I~VDGGI-~~~ti~~~~~aGAD~~V~GSaIf~a~ 230 (246)
T 3inp_A 154 ESNIDRVLIMSVNPGFGGQKFI-PAMLDKAKEISKWISSTDRDILLEIDGGV-NPYNIAEIAVCGVNAFVAGSAIFNSD 230 (246)
T ss_dssp GGGCSEEEEECSCTTC--CCCC-TTHHHHHHHHHHHHHHHTSCCEEEEESSC-CTTTHHHHHTTTCCEEEESHHHHTSS
T ss_pred HhcCCEEEEeeecCCCCCcccc-hHHHHHHHHHHHHHHhcCCCeeEEEECCc-CHHHHHHHHHcCCCEEEEehHHhCCC
Confidence 33799998754 334555422 345666777666542 125899999999 78999999999999999999988664
No 94
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=99.17 E-value=4.7e-10 Score=100.10 Aligned_cols=167 Identities=19% Similarity=0.239 Sum_probs=118.4
Q ss_pred HHHHHHHHh-CCCceeecCCCCC--CHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCc--
Q 020013 25 PELVAAVAN-AGGLGLLRAPDWE--APDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS-- 99 (332)
Q Consensus 25 ~~la~avs~-aGglG~i~~~~~~--~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~-- 99 (332)
.++|.+..+ |-++.++.-..|. +.+. +..+|+.++.|+-..=|+.++ -++..+...|+|+|.+.....+
T Consensus 64 ~~iA~~y~~~A~~IsVlTd~~~F~gs~~d----L~~ir~~v~lPvLrKDfi~~~--~qi~ea~~~GAD~ilLi~a~l~~~ 137 (251)
T 1i4n_A 64 EDFIRMYDELADAISILTEKHYFKGDPAF----VRAARNLTCRPILAKDFYIDT--VQVKLASSVGADAILIIARILTAE 137 (251)
T ss_dssp HHHHHHHHHHCSEEEEECCCSSSCCCTHH----HHHHHTTCCSCEEEECCCCST--HHHHHHHHTTCSEEEEEGGGSCHH
T ss_pred HHHHHHHHHhCCceEEEecccccCCCHHH----HHHHHHhCCCCEEEeeCCCCH--HHHHHHHHcCCCEEEEecccCCHH
Confidence 455555544 3345554322221 3444 566677777887655455433 2466688999999988643322
Q ss_pred --HHHHHHHHhCCCEEEEecCCHHHHHHHHHc-CCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcC
Q 020013 100 --EELVLEAHSAGVKVVPQVGSFDEARKAVNA-GVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIV 176 (332)
Q Consensus 100 --~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~-g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~ 176 (332)
.++++.+++.|+.++..|++.+|+..+.+. |+|.|-+.+++..+.. ..+....++.+.++. ++++|+.|||.
T Consensus 138 ~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t~~----~d~~~~~~l~~~ip~-~~~vIaEsGI~ 212 (251)
T 1i4n_A 138 QIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDTFE----IKKNVLWELLPLVPD-DTVVVAESGIK 212 (251)
T ss_dssp HHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTTCC----BCTTHHHHHGGGSCT-TSEEEEESCCC
T ss_pred HHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcccccCC----CCHHHHHHHHHhCCC-CCEEEEeCCCC
Confidence 345667778899999999999999999999 9999999887543321 224444555555532 58999999999
Q ss_pred CHHHHHHHHHcCcceeeeccccccCcc
Q 020013 177 DARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 177 ~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
+++++..+..+ |++|.+|++++.+++
T Consensus 213 t~edv~~~~~~-a~avLVG~aimr~~d 238 (251)
T 1i4n_A 213 DPRELKDLRGK-VNAVLVGTSIMKAEN 238 (251)
T ss_dssp CGGGHHHHTTT-CSEEEECHHHHHCSS
T ss_pred CHHHHHHHHHh-CCEEEEcHHHcCCcC
Confidence 99999999999 999999999998755
No 95
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=99.17 E-value=7.2e-10 Score=99.45 Aligned_cols=168 Identities=14% Similarity=0.122 Sum_probs=115.6
Q ss_pred HHHHHHHHhCCC--ceeecCCCCC--CHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC---
Q 020013 25 PELVAAVANAGG--LGLLRAPDWE--APDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--- 97 (332)
Q Consensus 25 ~~la~avs~aGg--lG~i~~~~~~--~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~--- 97 (332)
.+++.+..++|. +-++....+. +++. ++.+++.++.|+-..-++.+ ..++..+.+.|+|.|.+....
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~~f~G~~~~----l~~i~~~v~lPvl~kdfI~d--~~qi~~a~~~GAD~VlL~~~~l~~ 141 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPHRFGGSLLD----LKRVREAVDLPLLRKDFVVD--PFMLEEARAFGASAALLIVALLGE 141 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSSCCCHHH----HHHHHHHCCSCEEEESCCCS--HHHHHHHHHTTCSEEEEEHHHHGG
T ss_pred HHHHHHHHHcCCCEEEEecchhhhccCHHH----HHHHHHhcCCCEEECCcCCC--HHHHHHHHHcCCCEEEECccchHH
Confidence 567777766664 3333222221 3443 45566667888776655433 446788899999999985321
Q ss_pred CcHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCC--CCCcEEeecCc
Q 020013 98 YSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGD--RDIPIIAAGGI 175 (332)
Q Consensus 98 ~~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~--~~iPviaaGGI 175 (332)
...++++..+..|+.++..+++.+|+..+.+.|+|+|-+.+...... ...+..+.++.+.++. .++|+|+.|||
T Consensus 142 ~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~~~l~~~----~~dl~~~~~L~~~i~~~~~~~~vIAegGI 217 (254)
T 1vc4_A 142 LTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRDLATL----HINLETAPRLGRLARKRGFGGVLVAESGY 217 (254)
T ss_dssp GHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEESBCTTTC----CBCTTHHHHHHHHHHHTTCCSEEEEESCC
T ss_pred HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEccccCcCC----CCCHHHHHHHHHhCccccCCCeEEEEcCC
Confidence 22344555557799999999999999999999999998876543211 1223444444444321 14899999999
Q ss_pred CCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 176 VDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 176 ~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
.+++|+.++.. |++||.+|++++..+.
T Consensus 218 ~s~~dv~~l~~-Ga~gvlVGsAl~~~~d 244 (254)
T 1vc4_A 218 SRKEELKALEG-LFDAVLIGTSLMRAPD 244 (254)
T ss_dssp CSHHHHHTTTT-TCSEEEECHHHHTSSC
T ss_pred CCHHHHHHHHc-CCCEEEEeHHHcCCCC
Confidence 99999999999 9999999999997654
No 96
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.16 E-value=3.7e-10 Score=100.86 Aligned_cols=152 Identities=15% Similarity=0.083 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHhhcCCcEEEEeecCC----CCHHHHHHHHhcCCcEEEEccC--CCcHHHHHHHHhCCCEEEEecC--CH
Q 020013 49 DYLRDLIRKTRSLTERPFGVGVVLAF----PHNENIKAILSEKVAVLQVSWG--EYSEELVLEAHSAGVKVVPQVG--SF 120 (332)
Q Consensus 49 e~~~~~i~~~r~~~~~p~gvnl~~~~----~~~~~~~~~~~~~~~~I~~~~g--~~~~~~i~~~~~~g~~v~~~v~--s~ 120 (332)
+...+.++++|+.++.|+.+-...+. ...+.++.+.+.|++.|.++.- ..+.++++.+++.|.+++..++ +.
T Consensus 66 ~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~ 145 (248)
T 1geq_A 66 REAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTP 145 (248)
T ss_dssp HHHHHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCH
Confidence 44567888888877778554321121 1146788899999999999721 1234677778888988776554 55
Q ss_pred HHHHHHHHcCCC-EEEEecCC-CCcccCC-CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccc
Q 020013 121 DEARKAVNAGVD-AIIVQGRE-AGGHVIG-QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTR 197 (332)
Q Consensus 121 ~~a~~a~~~g~D-~ivv~G~e-aGGh~~~-~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~ 197 (332)
.+.......++| +|.+-... .+|...+ ....+.+++++++.. ++||++.|||.+++++.+++.+|||+|++||+
T Consensus 146 ~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~---~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsa 222 (248)
T 1geq_A 146 DERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC---RNKVAVGFGVSKREHVVSLLKEGANGVVVGSA 222 (248)
T ss_dssp HHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc---CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHH
Confidence 666666666678 55442221 1121101 123467888888876 79999999998889999999999999999999
Q ss_pred cccCcc
Q 020013 198 FVASEE 203 (332)
Q Consensus 198 fl~t~E 203 (332)
++...|
T Consensus 223 i~~~~~ 228 (248)
T 1geq_A 223 LVKIIG 228 (248)
T ss_dssp HHHHHH
T ss_pred HHhhHh
Confidence 987643
No 97
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=99.14 E-value=3.9e-10 Score=99.41 Aligned_cols=143 Identities=15% Similarity=0.271 Sum_probs=108.2
Q ss_pred HHHHHHHhhc-CCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC---CcHHHHH---HHHhCCCEEEEec--CC-HHH
Q 020013 53 DLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE---YSEELVL---EAHSAGVKVVPQV--GS-FDE 122 (332)
Q Consensus 53 ~~i~~~r~~~-~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~---~~~~~i~---~~~~~g~~v~~~v--~s-~~~ 122 (332)
..++.+|+.+ +.|+.+.+++.+| ..+++.+.+ +|.+.+|... .+.+.++ .+++.|+++...+ .+ .+.
T Consensus 53 ~~v~~lr~~~p~~~~dvhLmv~dp-~~~i~~~~~--Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~ 129 (227)
T 1tqx_A 53 PVINNLKKYTKSIFFDVHLMVEYP-EKYVPLLKT--SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQK 129 (227)
T ss_dssp HHHHHHGGGCSSCEEEEEEESSCG-GGGGGGCTT--SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGG
T ss_pred HHHHHHHHhCCCCcEEEEEEEcCH-HHHHHHHHh--CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHH
Confidence 4578888888 8999999999886 355655555 9999998543 3457788 9999999988766 23 344
Q ss_pred HHHHHHcC-CCEEEEecCC--CCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 123 ARKAVNAG-VDAIIVQGRE--AGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 123 a~~a~~~g-~D~ivv~G~e--aGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
.+...+.| +|+|.+-..+ .||... ....+..+.++++..+ +++|.++||| +.+++.++.++|||.+++||++.
T Consensus 130 ~~~~l~~g~~D~VlvmsV~pGf~gq~f-~~~~l~ki~~lr~~~~--~~~I~VdGGI-~~~ti~~~~~aGAd~~V~GsaIf 205 (227)
T 1tqx_A 130 LVPILDTNLINTVLVMTVEPGFGGQSF-MHDMMGKVSFLRKKYK--NLNIQVDGGL-NIETTEISASHGANIIVAGTSIF 205 (227)
T ss_dssp GHHHHTTTCCSEEEEESSCTTCSSCCC-CGGGHHHHHHHHHHCT--TCEEEEESSC-CHHHHHHHHHHTCCEEEESHHHH
T ss_pred HHHHhhcCCcCEEEEeeeccCCCCccc-chHHHHHHHHHHHhcc--CCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHHh
Confidence 55555655 9999885543 345432 2345777888877664 6899999999 89999999999999999999988
Q ss_pred cCc
Q 020013 200 ASE 202 (332)
Q Consensus 200 ~t~ 202 (332)
.++
T Consensus 206 ~~~ 208 (227)
T 1tqx_A 206 NAE 208 (227)
T ss_dssp TCS
T ss_pred CCC
Confidence 753
No 98
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.13 E-value=9.8e-10 Score=99.08 Aligned_cols=171 Identities=20% Similarity=0.155 Sum_probs=109.1
Q ss_pred cHHHHHHHHhCCCceeecCCC-----CCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC-
Q 020013 24 GPELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE- 97 (332)
Q Consensus 24 ~~~la~avs~aGglG~i~~~~-----~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~- 97 (332)
..+++.+..++|. ..|.... .... ...+.++++++.++.|+-++-.++. .+.++.+.+.|++.|.+....
T Consensus 32 ~~~~a~~~~~~Ga-~~i~v~d~~~~~~~~g-~~~~~i~~i~~~~~iPvi~~ggi~~--~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 32 LRDWVVEVEKRGA-GEILLTSIDRDGTKSG-YDTEMIRFVRPLTTLPIIASGGAGK--MEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp HHHHHHHHHHHTC-SEEEEEETTTSSCSSC-CCHHHHHHHGGGCCSCEEEESCCCS--THHHHHHHHHTCSEEECCCCC-
T ss_pred HHHHHHHHHHCCC-CEEEEEecCcccCCCc-ccHHHHHHHHHhcCCCEEEECCCCC--HHHHHHHHHcCCcHhhhhHHHH
Confidence 4567777777663 3332100 0010 1135567777777889888655543 355777888899999886322
Q ss_pred ----CcHHHHHHHHhCC--C-EE--EEec-------------------CC-HHHHHHHHHcCCCEEEEecCCCCcccCCC
Q 020013 98 ----YSEELVLEAHSAG--V-KV--VPQV-------------------GS-FDEARKAVNAGVDAIIVQGREAGGHVIGQ 148 (332)
Q Consensus 98 ----~~~~~i~~~~~~g--~-~v--~~~v-------------------~s-~~~a~~a~~~g~D~ivv~G~eaGGh~~~~ 148 (332)
.+..+.+.++..+ . .+ ...+ .+ .+.++.+.+.|++.|++.+....|+..+
T Consensus 108 ~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g- 186 (266)
T 2w6r_A 108 FREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSG- 186 (266)
T ss_dssp -----CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTTCSC-
T ss_pred hCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEEEeecCCCCcCC-
Confidence 2333333333334 1 22 2222 13 4556888999999999977654454322
Q ss_pred CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 149 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 149 ~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
..+.++.++++.+ ++|||+.|||.+++++.+++.+||+||++||+|+..+.
T Consensus 187 -~~~~~i~~l~~~~---~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~~ 237 (266)
T 2w6r_A 187 -YDTEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREI 237 (266)
T ss_dssp -CCHHHHHHHGGGC---CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC----
T ss_pred -CCHHHHHHHHHHc---CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCCC
Confidence 2478888888776 79999999999999999999999999999999987653
No 99
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.12 E-value=9.3e-10 Score=108.67 Aligned_cols=185 Identities=14% Similarity=0.129 Sum_probs=124.7
Q ss_pred HHHHHHHHhCCCceeecCCC-CCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcHHHH
Q 020013 25 PELVAAVANAGGLGLLRAPD-WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELV 103 (332)
Q Consensus 25 ~~la~avs~aGglG~i~~~~-~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~~~i 103 (332)
.+.+.++.+ ||+.++.... -.+.+++.++.+++++++. .+++-++++ +.++.+.+.++|.|++...+.+...+
T Consensus 28 ~~~ve~al~-~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~-~~~v~liIN----D~~dlA~~~gAdGVHLgq~dl~~~~a 101 (540)
T 3nl6_A 28 YGQVEAGLQ-NGVTLVQIREKDADTKFFIEEALQIKELCH-AHNVPLIIN----DRIDVAMAIGADGIHVGQDDMPIPMI 101 (540)
T ss_dssp HHHHHHHHH-TTCSEEEECCSSSCTTHHHHHHHHHHHHHH-HTTCCEEEC----SCSHHHHHTTCSEEEECTTSSCHHHH
T ss_pred HHHHHHHHH-CCCCEEEEecCCCCHHHHHHHHHHHHHHHH-hcCCEEEEe----CcHHHHHHcCCCEEEEChhhcCHHHH
Confidence 344444444 5577776521 1244556666666666543 234555554 35678888999999998776676777
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHHcC---CCEEEEecC-CCCcccCC--CCchhhhHHHHHHHhC---CCCCcEEeecC
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVNAG---VDAIIVQGR-EAGGHVIG--QDGLISLLPMVVDLIG---DRDIPIIAAGG 174 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~~g---~D~ivv~G~-eaGGh~~~--~~~~~~ll~~i~~~~~---~~~iPviaaGG 174 (332)
+++...+..+...++++++++.+.+.| +|||.+-.. ....+... +...+..++++.+.+. ..++|+++.||
T Consensus 102 r~~lg~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGG 181 (540)
T 3nl6_A 102 RKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGG 181 (540)
T ss_dssp HHHHCTTSEEEEEECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESS
T ss_pred HHHhCCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcC
Confidence 777777889999999999999999999 999998221 11122211 1123666777766531 12799999999
Q ss_pred cCCHHHHHHHHH--------cCcceeeeccccccCccCC-CCHHHHHHHhc
Q 020013 175 IVDARGYVAALS--------LGAQGICLGTRFVASEESY-AHPEYKRKLVE 216 (332)
Q Consensus 175 I~~~~~v~~al~--------~GA~gV~~GT~fl~t~Es~-~~~~~k~~~~~ 216 (332)
| +++++.+++. .||+||.++|+++.++... ....+++.+.+
T Consensus 182 I-~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~a~~~l~~~~~~ 231 (540)
T 3nl6_A 182 L-HPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDK 231 (540)
T ss_dssp C-CTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHHHHHHHHHHHHC
T ss_pred C-CHHHHHHHHHhhcccccccCceEEEEeHHHhcCCCHHHHHHHHHHHHHh
Confidence 9 8999999998 8999999999999765421 22344444444
No 100
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=99.12 E-value=1.9e-10 Score=101.91 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=85.2
Q ss_pred HHHHHHH---HhCCCEEEEe-cCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHH-HhCCCC-CcEEeec
Q 020013 100 EELVLEA---HSAGVKVVPQ-VGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVD-LIGDRD-IPIIAAG 173 (332)
Q Consensus 100 ~~~i~~~---~~~g~~v~~~-v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~-~~~~~~-iPviaaG 173 (332)
.+.++.. .+.|.++++. ..++..++++.+.|+|+|.--|..-|+.. + .....+++.+++ .. + +|||++|
T Consensus 111 ~~tv~aa~~L~k~Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~-G-i~~~~~L~~i~~~~~---~~vPVI~~G 185 (268)
T 2htm_A 111 LETLKAAERLIEEDFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIGSGW-G-VRTRALLELFAREKA---SLPPVVVDA 185 (268)
T ss_dssp HHHHHHHHHHHHTTCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTTTCC-C-STTHHHHHHHHHTTT---TSSCBEEES
T ss_pred HHHHHHHHHHHHCCCEEeeccCCCHHHHHHHHhcCCCEEEecCccCcCCc-c-cCCHHHHHHHHHhcC---CCCeEEEeC
Confidence 3455544 4569999964 46899999999999999977676666532 2 234677888887 44 6 9999999
Q ss_pred CcCCHHHHHHHHHcCcceeeeccccccCccCCC--CHHHHHHHhc
Q 020013 174 GIVDARGYVAALSLGAQGICLGTRFVASEESYA--HPEYKRKLVE 216 (332)
Q Consensus 174 GI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~--~~~~k~~~~~ 216 (332)
||++++|++.++.+|||||++||++..+ +++. ...+++++..
T Consensus 186 GI~tpsDAa~AmeLGAdgVlVgSAI~~a-~dP~~ma~af~~Av~a 229 (268)
T 2htm_A 186 GLGLPSHAAEVMELGLDAVLVNTAIAEA-QDPPAMAEAFRLAVEA 229 (268)
T ss_dssp CCCSHHHHHHHHHTTCCEEEESHHHHTS-SSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEEChHHhCC-CCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999844 3343 5666666654
No 101
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.10 E-value=3.2e-09 Score=96.07 Aligned_cols=148 Identities=17% Similarity=0.105 Sum_probs=102.4
Q ss_pred HHHHHHHHhh-cCCcEEEEeecC----CCCHHHHHHHHhcCCcEEEEccCCC---cHHHHHHHHhCCCEEEEec---CCH
Q 020013 52 RDLIRKTRSL-TERPFGVGVVLA----FPHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVVPQV---GSF 120 (332)
Q Consensus 52 ~~~i~~~r~~-~~~p~gvnl~~~----~~~~~~~~~~~~~~~~~I~~~~g~~---~~~~i~~~~~~g~~v~~~v---~s~ 120 (332)
-+.++++|+. ++.|+.+-...+ .+.+..++.+.+.|+|.+.++ ..+ ..++++.+++.|++++..+ ++.
T Consensus 82 ~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~-d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~ 160 (268)
T 1qop_A 82 FEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA-DVPVEESAPFRQAALRHNIAPIFICPPNADD 160 (268)
T ss_dssp HHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET-TCCGGGCHHHHHHHHHTTCEEECEECTTCCH
T ss_pred HHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc-CCCHHHHHHHHHHHHHcCCcEEEEECCCCCH
Confidence 3678888887 788866521111 123577888999999998887 332 3467888899998765433 345
Q ss_pred HHHHHHHHcCCCEEEEecCC-CCcccCC-CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccc
Q 020013 121 DEARKAVNAGVDAIIVQGRE-AGGHVIG-QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 121 ~~a~~a~~~g~D~ivv~G~e-aGGh~~~-~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~f 198 (332)
+.++...+...+++.+.... .+|.... ......++.++++.. ++||++.|||++++++.+++..|||+|++||++
T Consensus 161 ~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~---~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai 237 (268)
T 1qop_A 161 DLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH---AAPALQGFGISSPEQVSAAVRAGAAGAISGSAI 237 (268)
T ss_dssp HHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT---CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc---CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 66666666555555554332 2232211 123467888888765 799999999988999999999999999999999
Q ss_pred ccCcc
Q 020013 199 VASEE 203 (332)
Q Consensus 199 l~t~E 203 (332)
....|
T Consensus 238 ~~~~~ 242 (268)
T 1qop_A 238 VKIIE 242 (268)
T ss_dssp HHHHH
T ss_pred hhhHh
Confidence 87754
No 102
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=99.10 E-value=5.1e-09 Score=92.60 Aligned_cols=169 Identities=14% Similarity=0.136 Sum_probs=118.6
Q ss_pred cHHHHHHHHhCCC--ceeecCCCCC--CHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCc
Q 020013 24 GPELVAAVANAGG--LGLLRAPDWE--APDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS 99 (332)
Q Consensus 24 ~~~la~avs~aGg--lG~i~~~~~~--~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~ 99 (332)
+|.-.+...++|+ +.++.-..|. +.+. +..+|+.++.|+--.=|+. ++-++..+...|+|+|.+-....+
T Consensus 65 dp~~iA~~~~~GA~aiSVLTd~~~F~Gs~~~----L~~vr~~v~lPvLrKDFii--d~yQI~eAr~~GADaILLI~a~L~ 138 (258)
T 4a29_A 65 DPIEYAKFMERYAVGLSITTEEKYFNGSYET----LRKIASSVSIPILMSDFIV--KESQIDDAYNLGADTVLLIVKILT 138 (258)
T ss_dssp CHHHHHHHHTTTCSEEEEECCSTTTCCCHHH----HHHHHTTCSSCEEEESCCC--SHHHHHHHHHHTCSEEEEEGGGSC
T ss_pred CHHHHHHHHhCCCeEEEEeCCCCCCCCCHHH----HHHHHHhcCCCEeeccccc--cHHHHHHHHHcCCCeeehHHhhcC
Confidence 4544444445553 4444333222 3444 5667777788875543333 245677788899999987543333
Q ss_pred H----HHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCc
Q 020013 100 E----ELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGI 175 (332)
Q Consensus 100 ~----~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI 175 (332)
. ++.+..++.|+.++..|++.+|...+.+.|++.|-+.++.-... . ..+....++.+.++. ++.+|+.+||
T Consensus 139 ~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf---~-vdl~~t~~L~~~ip~-~~~~VsESGI 213 (258)
T 4a29_A 139 ERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFETG---E-INKENQRKLISMIPS-NVVKVAKLGI 213 (258)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTTTC---C-BCHHHHHHHHTTSCT-TSEEEEEESS
T ss_pred HHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCcccc---c-cCHHHHHHHHhhCCC-CCEEEEcCCC
Confidence 2 45666778899999999999999999999999998877643221 1 223334455554443 6889999999
Q ss_pred CCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 176 VDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 176 ~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
.+++++..+...|+++|.+|++||.+++
T Consensus 214 ~t~~dv~~l~~~G~~a~LVGealmr~~d 241 (258)
T 4a29_A 214 SERNEIEELRKLGVNAFLISSSLMRNPE 241 (258)
T ss_dssp CCHHHHHHHHHTTCCEEEECHHHHHCTT
T ss_pred CCHHHHHHHHHCCCCEEEECHHHhCCCc
Confidence 9999999999999999999999998764
No 103
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=99.10 E-value=7e-10 Score=100.40 Aligned_cols=151 Identities=17% Similarity=0.184 Sum_probs=97.9
Q ss_pred CHHHHHHHHHHHHhhcCCcEEE----EeecCCCCHHHHHHHHhcCCcEEEEccCCC---cHHHHHHHHhCCCEEEEec--
Q 020013 47 APDYLRDLIRKTRSLTERPFGV----GVVLAFPHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVVPQV-- 117 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~~~p~gv----nl~~~~~~~~~~~~~~~~~~~~I~~~~g~~---~~~~i~~~~~~g~~v~~~v-- 117 (332)
+.+.+.+.++++|+..+.|+.+ |.+.....+..++.+.+.|+|.+.+. +.+ ..++++.+++.|+..+..+
T Consensus 75 ~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~-Dl~~ee~~~~~~~~~~~gl~~i~liap 153 (271)
T 1ujp_A 75 SVQGALELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILP-DLPPDEDPGLVRLAQEIGLETVFLLAP 153 (271)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECT-TCCGGGCHHHHHHHHHHTCEEECEECT
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEec-CCCHHHHHHHHHHHHHcCCceEEEeCC
Confidence 4455667788888777889887 31111123567888999999977765 222 3467788888887655433
Q ss_pred -CCHHHHHHHHHcCCCEEEEecC-CCCcccCC-CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeee
Q 020013 118 -GSFDEARKAVNAGVDAIIVQGR-EAGGHVIG-QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 118 -~s~~~a~~a~~~g~D~ivv~G~-eaGGh~~~-~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~ 194 (332)
++.+.++...+.+..++.+... ...|...+ ......++.++++.. ++||++.|||++++++.++ .|||||++
T Consensus 154 ~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~---~~Pv~vGfGI~t~e~a~~~--~~ADgVIV 228 (271)
T 1ujp_A 154 TSTDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART---ALPVAVGFGVSGKATAAQA--AVADGVVV 228 (271)
T ss_dssp TCCHHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC---CSCEEEESCCCSHHHHHHH--TTSSEEEE
T ss_pred CCCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc---CCCEEEEcCCCCHHHHHHh--cCCCEEEE
Confidence 3456555555444444433211 11121101 123357788887765 7999999999999999996 89999999
Q ss_pred ccccccCcc
Q 020013 195 GTRFVASEE 203 (332)
Q Consensus 195 GT~fl~t~E 203 (332)
||+|....|
T Consensus 229 GSAi~~~~~ 237 (271)
T 1ujp_A 229 GSALVRALE 237 (271)
T ss_dssp CHHHHHHHH
T ss_pred ChHHhcccc
Confidence 999987654
No 104
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.09 E-value=3.8e-10 Score=102.30 Aligned_cols=172 Identities=17% Similarity=0.264 Sum_probs=115.8
Q ss_pred CccceecCCCCCCCCcHH-HHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHh-h-cCCcEEEEeecCC-----C-C---
Q 020013 9 FEYGIVQAPLGPDISGPE-LVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRS-L-TERPFGVGVVLAF-----P-H--- 76 (332)
Q Consensus 9 ~~~Pii~apM~~g~s~~~-la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~-~-~~~p~gvnl~~~~-----~-~--- 76 (332)
+++|++.+||. +..++. ++.+..+.|.-+++. ++.. +..+++ . .+.|+.+++.... + .
T Consensus 32 id~~~~l~p~~-~~~~~~~~~~~~~~~g~~~i~~-----~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~ 101 (273)
T 2qjg_A 32 MDHGVSNGPIK-GLIDIRKTVNDVAEGGANAVLL-----HKGI----VRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVI 101 (273)
T ss_dssp CCHHHHHCSCT-TSSSHHHHHHHHHHHTCSEEEE-----CHHH----HHSCCCSSSCCCEEEEECEECCTTSSSTTCCEE
T ss_pred cccccccCCCc-chhhHHHHHHHHHhcCCCEEEe-----CHHH----HHHHHHhhcCCCCEEEEEcCCCcCCCCcccchH
Confidence 78899999997 677775 666666666555542 2221 222222 1 2457777664322 1 1
Q ss_pred HHHHHHHHhcCCcEE--EEccCCCcH--------HHHHHHHhCCCEEEEec----------CCH---HHH-HHHHHcCCC
Q 020013 77 NENIKAILSEKVAVL--QVSWGEYSE--------ELVLEAHSAGVKVVPQV----------GSF---DEA-RKAVNAGVD 132 (332)
Q Consensus 77 ~~~~~~~~~~~~~~I--~~~~g~~~~--------~~i~~~~~~g~~v~~~v----------~s~---~~a-~~a~~~g~D 132 (332)
.+.++.+++.|++.| ++..+..+. ++++.+++.|++++..+ .+. +++ +.+.+.|+|
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad 181 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGAD 181 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCC
Confidence 356778889999999 655554432 23444556688887655 333 454 778899999
Q ss_pred EEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCC--HHH----HHHHHHcCcceeeeccccccCcc
Q 020013 133 AIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD--ARG----YVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 133 ~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~--~~~----v~~al~~GA~gV~~GT~fl~t~E 203 (332)
+|.+.. . ..+.++.++.+.+ ++||++.|||.+ .++ +.+++.+||+||.+||.++.++.
T Consensus 182 ~i~~~~------~----~~~~~l~~i~~~~---~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~ 245 (273)
T 2qjg_A 182 IVKTSY------T----GDIDSFRDVVKGC---PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDD 245 (273)
T ss_dssp EEEECC------C----SSHHHHHHHHHHC---SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSS
T ss_pred EEEECC------C----CCHHHHHHHHHhC---CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCCC
Confidence 998741 1 2367788888776 799999999974 666 77777899999999999987653
No 105
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=99.05 E-value=2.7e-10 Score=101.01 Aligned_cols=144 Identities=10% Similarity=0.001 Sum_probs=107.4
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC--CcHHHHHHHHhC---------CCEEEEec--CC
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--YSEELVLEAHSA---------GVKVVPQV--GS 119 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~--~~~~~i~~~~~~---------g~~v~~~v--~s 119 (332)
..++.+|+.++. .+.+++..+ +.+++.+.+.|+|.|.+|.+. .+.+.++.+++. |+++...+ .|
T Consensus 61 ~~v~~lr~~~~~--DvhLMv~~p-~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~T 137 (237)
T 3cu2_A 61 IGIKYFPTHCFK--DVHLMVRNQ-LEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPET 137 (237)
T ss_dssp HHHHTSCTTSEE--EEEEECSCH-HHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTS
T ss_pred HHHHHHhhhCCC--CeEEEEECH-HHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCC
Confidence 346667766543 899998766 678999999999999998543 345778888888 88888766 45
Q ss_pred HHHHHHHHHcCCCEEEEe--cCCCCcccCCCCchhhhHHHHHHHhCC--CCCcEEeecCcCCHHHHHHHHH--cCcceee
Q 020013 120 FDEARKAVNAGVDAIIVQ--GREAGGHVIGQDGLISLLPMVVDLIGD--RDIPIIAAGGIVDARGYVAALS--LGAQGIC 193 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv~--G~eaGGh~~~~~~~~~ll~~i~~~~~~--~~iPviaaGGI~~~~~v~~al~--~GA~gV~ 193 (332)
+.+....+..++|+|.+- ++..||... ....+..+.++++.... .++||.+.||| +.+++..+.. +|||+++
T Consensus 138 p~~~l~~~l~~~D~vlvMsv~pgfggq~f-~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI-~~~~~~~~~~~~aGad~~V 215 (237)
T 3cu2_A 138 PISELEPYLDQIDVIQLLTLDPRNGTKYP-SELILDRVIQVEKRLGNRRVEKLINIDGSM-TLELAKYFKQGTHQIDWLV 215 (237)
T ss_dssp CGGGGTTTTTTCSEEEEESEETTTTEECC-HHHHHHHHHHHHHHHGGGGGGCEEEEESSC-CHHHHHHHHHSSSCCCCEE
T ss_pred hHHHHHHHhhcCceeeeeeeccCcCCeec-ChhHHHHHHHHHHHHHhcCCCceEEEECCc-CHHHHHHHHHhCCCCcEEE
Confidence 555555555689999773 444455532 22346667777766531 15899999999 8999999999 9999999
Q ss_pred eccccccC
Q 020013 194 LGTRFVAS 201 (332)
Q Consensus 194 ~GT~fl~t 201 (332)
+||+++.+
T Consensus 216 vGSaIf~~ 223 (237)
T 3cu2_A 216 SGSALFSG 223 (237)
T ss_dssp ECGGGGSS
T ss_pred EeeHHhCC
Confidence 99999865
No 106
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.05 E-value=1e-09 Score=97.62 Aligned_cols=170 Identities=16% Similarity=0.161 Sum_probs=111.9
Q ss_pred CcHHHHHHHHhCCCceeecCCCC-----CCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC
Q 020013 23 SGPELVAAVANAGGLGLLRAPDW-----EAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE 97 (332)
Q Consensus 23 s~~~la~avs~aGglG~i~~~~~-----~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~ 97 (332)
...+++.+..++|. ..|..... .... ..+.+++++ ..+.|+-++=.+. ..+.++.+++.|+|.|.+....
T Consensus 31 ~~~~~a~~~~~~Ga-d~i~v~d~~~~~~~~~~-~~~~i~~i~-~~~ipvi~~Ggi~--~~~~~~~~~~~Gad~V~lg~~~ 105 (241)
T 1qo2_A 31 DPVELVEKLIEEGF-TLIHVVDLSNAIENSGE-NLPVLEKLS-EFAEHIQIGGGIR--SLDYAEKLRKLGYRRQIVSSKV 105 (241)
T ss_dssp CHHHHHHHHHHTTC-CCEEEEEHHHHHHCCCT-THHHHHHGG-GGGGGEEEESSCC--SHHHHHHHHHTTCCEEEECHHH
T ss_pred CHHHHHHHHHHcCC-CEEEEecccccccCCch-hHHHHHHHH-hcCCcEEEECCCC--CHHHHHHHHHCCCCEEEECchH
Confidence 34577777777663 22321000 0000 123455555 4567877654443 2567778888999999885321
Q ss_pred -CcHHHHHHHHhCCCE--EEEec---------------CCH-HHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHH
Q 020013 98 -YSEELVLEAHSAGVK--VVPQV---------------GSF-DEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMV 158 (332)
Q Consensus 98 -~~~~~i~~~~~~g~~--v~~~v---------------~s~-~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i 158 (332)
..+++++.++..|-. +...+ .+. +.++.+.+.|++.|++.+....|+..+ ..+.++.++
T Consensus 106 l~~p~~~~~~~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g--~~~~~i~~l 183 (241)
T 1qo2_A 106 LEDPSFLKSLREIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTLQE--HDFSLTKKI 183 (241)
T ss_dssp HHCTTHHHHHHTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHTCC--CCHHHHHHH
T ss_pred hhChHHHHHHHHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccCCc--CCHHHHHHH
Confidence 011344445544433 22344 144 446788999999999987655454322 248899999
Q ss_pred HHHhCCCCCcEEeecCcCCHHHHHHHHHc-----C-cceeeeccccccCc
Q 020013 159 VDLIGDRDIPIIAAGGIVDARGYVAALSL-----G-AQGICLGTRFVASE 202 (332)
Q Consensus 159 ~~~~~~~~iPviaaGGI~~~~~v~~al~~-----G-A~gV~~GT~fl~t~ 202 (332)
++.+ ++|||+.|||++++++.+++.+ | ||||++||+|+..+
T Consensus 184 ~~~~---~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~ 230 (241)
T 1qo2_A 184 AIEA---EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGI 230 (241)
T ss_dssp HHHH---TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTS
T ss_pred HHhc---CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCC
Confidence 9887 7999999999999999999998 9 99999999998663
No 107
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.04 E-value=8.6e-10 Score=96.76 Aligned_cols=143 Identities=11% Similarity=0.067 Sum_probs=95.9
Q ss_pred HHHHHHHhh-cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCc---HHHHHHHHhCCCEEEE---ecCCHHHHHH
Q 020013 53 DLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS---EELVLEAHSAGVKVVP---QVGSFDEARK 125 (332)
Q Consensus 53 ~~i~~~r~~-~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~---~~~i~~~~~~g~~v~~---~v~s~~~a~~ 125 (332)
+.++++|+. ++.|+...+-+......+++.+.+.|+|+|.+|..... .++++.+++.|++.+. .+.|.++++.
T Consensus 48 ~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~ 127 (218)
T 3jr2_A 48 KAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQDAKA 127 (218)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHHHHHH
Confidence 456667765 45555443333222255678889999999999943221 2455667788988753 4457788888
Q ss_pred HHHcCCCEEEE-ecCCCC--cccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 126 AVNAGVDAIIV-QGREAG--GHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 126 a~~~g~D~ivv-~G~eaG--Gh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
+.+.|+|++++ .+...+ |... ....+..++++.. . ++|+++.||| +++++.+++.+|||++++||+++.+
T Consensus 128 ~~~~g~d~v~~~~~~~~~~~g~~~-~~~~l~~i~~~~~-~---~~pi~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~~a 200 (218)
T 3jr2_A 128 WVDLGITQAIYHRSRDAELAGIGW-TTDDLDKMRQLSA-L---GIELSITGGI-VPEDIYLFEGIKTKTFIAGRALAGA 200 (218)
T ss_dssp HHHTTCCEEEEECCHHHHHHTCCS-CHHHHHHHHHHHH-T---TCEEEEESSC-CGGGGGGGTTSCEEEEEESGGGSHH
T ss_pred HHHcCccceeeeeccccccCCCcC-CHHHHHHHHHHhC-C---CCCEEEECCC-CHHHHHHHHHcCCCEEEEchhhcCC
Confidence 88889999876 332221 2210 1122334444432 2 6999999999 7999999999999999999998865
No 108
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.03 E-value=5e-09 Score=90.82 Aligned_cols=142 Identities=14% Similarity=0.100 Sum_probs=97.6
Q ss_pred HHHHHHHhhc-CCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCC---cHHHHHHHHhCCCEEEEecC---CHHH-HH
Q 020013 53 DLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVVPQVG---SFDE-AR 124 (332)
Q Consensus 53 ~~i~~~r~~~-~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~---~~~~i~~~~~~g~~v~~~v~---s~~~-a~ 124 (332)
+.++++|+.+ +.|+-+.+++.+..+.+++.+.+.|+|+|.+|.... ..+..+.+++.|.++...+. ++.+ +.
T Consensus 42 ~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~ 121 (207)
T 3ajx_A 42 SVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQ 121 (207)
T ss_dssp HHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecCCChHHHHH
Confidence 3466676665 678888888764225568889999999999885432 12345666667888755553 5555 56
Q ss_pred HHHHcCCCEE-EEecCCC--CcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 125 KAVNAGVDAI-IVQGREA--GGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 125 ~a~~~g~D~i-vv~G~ea--GGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
.+.+.|+|+| +.-+... .|. .... ..++++... ++|+++.||| +++++.++++.|||+|.+||+++.+
T Consensus 122 ~~~~~g~d~v~~~~~~~~~~~g~---~~~~-~~i~~~~~~----~~pi~v~GGI-~~~~~~~~~~aGad~vvvGsaI~~~ 192 (207)
T 3ajx_A 122 EVRALGAKFVEMHAGLDEQAKPG---FDLN-GLLAAGEKA----RVPFSVAGGV-KVATIPAVQKAGAEVAVAGGAIYGA 192 (207)
T ss_dssp HHHHTTCSEEEEECCHHHHTSTT---CCTH-HHHHHHHHH----TSCEEEESSC-CGGGHHHHHHTTCSEEEESHHHHTS
T ss_pred HHHHhCCCEEEEEecccccccCC---CchH-HHHHHhhCC----CCCEEEECCc-CHHHHHHHHHcCCCEEEEeeeccCC
Confidence 6667899999 5434321 121 1111 444444432 4899999999 6999999999999999999999876
Q ss_pred cc
Q 020013 202 EE 203 (332)
Q Consensus 202 ~E 203 (332)
+.
T Consensus 193 ~d 194 (207)
T 3ajx_A 193 AD 194 (207)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 109
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=99.03 E-value=3.6e-09 Score=95.45 Aligned_cols=149 Identities=13% Similarity=0.094 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhhc-CCcEEEEeecC----CCCHHHHHHHHhcCCcEEEEccCCCcH---HHHHHHHhCCCEEEEec---C
Q 020013 50 YLRDLIRKTRSLT-ERPFGVGVVLA----FPHNENIKAILSEKVAVLQVSWGEYSE---ELVLEAHSAGVKVVPQV---G 118 (332)
Q Consensus 50 ~~~~~i~~~r~~~-~~p~gvnl~~~----~~~~~~~~~~~~~~~~~I~~~~g~~~~---~~i~~~~~~g~~v~~~v---~ 118 (332)
.+.+.++++|+.. +.|+.+-...+ ...+..++.+.+.|++.+.++ +.++. ++++.+++.|+.++..+ +
T Consensus 80 ~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~-dl~~ee~~~~~~~~~~~gl~~i~l~~p~t 158 (262)
T 2ekc_A 80 DVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVP-DLPPEEAEELKAVMKKYVLSFVPLGAPTS 158 (262)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECT-TCCHHHHHHHHHHHHHTTCEECCEECTTC
T ss_pred HHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEEC-CCCHHHHHHHHHHHHHcCCcEEEEeCCCC
Confidence 3446678888776 78887721111 112466788899999998886 43333 45566778887755432 3
Q ss_pred CHHHHHHHHHcCCCEEEEecCC-CCcccCCC--CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeec
Q 020013 119 SFDEARKAVNAGVDAIIVQGRE-AGGHVIGQ--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 195 (332)
Q Consensus 119 s~~~a~~a~~~g~D~ivv~G~e-aGGh~~~~--~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~G 195 (332)
+.+..+...+...+++.+.... ..|...+. .....++..+++.. ++||++.|||++++++.+ +..|||||++|
T Consensus 159 ~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~---~~pv~vG~GI~t~e~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 159 TRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC---DKPVVVGFGVSKKEHARE-IGSFADGVVVG 234 (262)
T ss_dssp CHHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHC---CSCEEEESSCCSHHHHHH-HHTTSSEEEEC
T ss_pred CHHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc---CCCEEEeCCCCCHHHHHH-HHcCCCEEEEC
Confidence 4555555555555555443321 11221111 12346788888765 799999999999999999 78899999999
Q ss_pred cccccCcc
Q 020013 196 TRFVASEE 203 (332)
Q Consensus 196 T~fl~t~E 203 (332)
|+|...-+
T Consensus 235 Sai~~~~~ 242 (262)
T 2ekc_A 235 SALVKLAG 242 (262)
T ss_dssp HHHHHHHH
T ss_pred HHHHhhhh
Confidence 99997743
No 110
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=99.02 E-value=4.1e-09 Score=101.51 Aligned_cols=141 Identities=14% Similarity=0.188 Sum_probs=107.5
Q ss_pred HHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCc----HHHHHHHHhCCCEEEEecCCHHHHHHHHHcC
Q 020013 55 IRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS----EELVLEAHSAGVKVVPQVGSFDEARKAVNAG 130 (332)
Q Consensus 55 i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~----~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g 130 (332)
++.+|+.++.|+-..=|+.+ .-++..+...|+|+|.+.....+ .++++.+++.|+.++..|+|.+|+..+.+.|
T Consensus 100 L~~vr~~v~lPvLrKDFI~d--~~Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lg 177 (452)
T 1pii_A 100 LPIVSQIAPQPILCKDFIID--PYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALG 177 (452)
T ss_dssp HHHHHHHCCSCEEEESCCCS--HHHHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTT
T ss_pred HHHHHHhcCCCeEEEeccCC--HHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCC
Confidence 45566666778754434433 33566688899999988654433 2456677889999999999999999999999
Q ss_pred CCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 131 VDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 131 ~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
+|.|-+.+++..+. ...+....++.+.++. ++++|+.|||.+++++..+..+ |++|.+|+++|.+++
T Consensus 178 a~iIGinnr~L~t~----~~dl~~~~~L~~~ip~-~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~~d 244 (452)
T 1pii_A 178 AKVVGINNRDLRDL----SIDLNRTRELAPKLGH-NVTVISESGINTYAQVRELSHF-ANGFLIGSALMAHDD 244 (452)
T ss_dssp CSEEEEESEETTTT----EECTHHHHHHHHHHCT-TSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTCSC
T ss_pred CCEEEEeCCCCCCC----CCCHHHHHHHHHhCCC-CCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCCcC
Confidence 99999987754322 1235555555555543 6899999999999999999999 999999999998865
No 111
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.99 E-value=1e-09 Score=97.77 Aligned_cols=132 Identities=16% Similarity=0.151 Sum_probs=90.4
Q ss_pred CHHHHHHHHhcCCcEEEEccCCCc---HHHHHHHHhCCCEEEEec---CCHHHHHHHHHcCCCEEEEecCCCCcccCCCC
Q 020013 76 HNENIKAILSEKVAVLQVSWGEYS---EELVLEAHSAGVKVVPQV---GSFDEARKAVNAGVDAIIVQGREAGGHVIGQD 149 (332)
Q Consensus 76 ~~~~~~~~~~~~~~~I~~~~g~~~---~~~i~~~~~~g~~v~~~v---~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~ 149 (332)
.+.+++.+.+.|+|.+.+. +.|+ .++.+.+++.|+..+..+ ++.+.++...+.+-++|-+... -|.++...
T Consensus 105 ~e~F~~~~~~aGvdG~Iip-DLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~--~GvTG~~~ 181 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVP-ELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLAS--IGITGTKS 181 (252)
T ss_dssp HHHHHHHHHHTTEEEEECT-TCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECC--SCSSSCSH
T ss_pred HHHHHHHHHHcCCCEEEeC-CCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEec--CCCCCccc
Confidence 3667889999999999887 3433 467777888998765433 3466777777776666554322 12221111
Q ss_pred ----chhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHHH
Q 020013 150 ----GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKL 214 (332)
Q Consensus 150 ----~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~ 214 (332)
....++.++++.. ++||++.+||++++++.++.. +||||++||+|+..-|....+...+.+
T Consensus 182 ~~~~~~~~~v~~vr~~~---~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk~i~~~~~~~~~~~~ 246 (252)
T 3tha_A 182 VEEAILQDKVKEIRSFT---NLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVKCFKQGNLDIIMKDI 246 (252)
T ss_dssp HHHHHHHHHHHHHHTTC---CSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHHHTTSSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhc---CCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHHHHHhcCHHHHHHHH
Confidence 1245666666654 799999999999999998766 699999999999877655444444443
No 112
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.92 E-value=5.9e-08 Score=90.61 Aligned_cols=120 Identities=17% Similarity=0.104 Sum_probs=84.2
Q ss_pred HHHHhcCCcEEEEccCC---------C-------------------cHHHHHHHHhC-CCEEEEecC---------CHH-
Q 020013 81 KAILSEKVAVLQVSWGE---------Y-------------------SEELVLEAHSA-GVKVVPQVG---------SFD- 121 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~---------~-------------------~~~~i~~~~~~-g~~v~~~v~---------s~~- 121 (332)
+.+.++|.|.|.+|.++ + ..++++.+++. +.+|...++ +.+
T Consensus 151 ~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~ 230 (338)
T 1z41_A 151 ARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIAD 230 (338)
T ss_dssp HHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHH
T ss_pred HHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHH
Confidence 44567899999998653 1 12455555543 566665542 233
Q ss_pred ---HHHHHHHcCCCEEEEecCCCCcc--cCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeec
Q 020013 122 ---EARKAVNAGVDAIIVQGREAGGH--VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLG 195 (332)
Q Consensus 122 ---~a~~a~~~g~D~ivv~G~eaGGh--~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~G 195 (332)
-++.+.+.|+|+|.+.+...-.. ..++...+.++.++++.+ ++||++.|||.+++++.++++.| ||.|++|
T Consensus 231 ~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~---~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 231 HIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA---DMATGAVGMITDGSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH---CCEEEECSSCCSHHHHHHHHHTTSCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC---CCCEEEECCCCCHHHHHHHHHcCCceEEeec
Confidence 34566789999999965321111 111112366788888888 79999999999999999999999 9999999
Q ss_pred cccccCcc
Q 020013 196 TRFVASEE 203 (332)
Q Consensus 196 T~fl~t~E 203 (332)
+.|+..++
T Consensus 308 R~~i~nPd 315 (338)
T 1z41_A 308 RELLRDPF 315 (338)
T ss_dssp HHHHHCTT
T ss_pred HHHHhCch
Confidence 99998754
No 113
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.90 E-value=8.1e-09 Score=94.45 Aligned_cols=188 Identities=20% Similarity=0.288 Sum_probs=124.6
Q ss_pred CCcHHHHHHHHhCCCceeecC-------------CCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCC
Q 020013 22 ISGPELVAAVANAGGLGLLRA-------------PDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKV 88 (332)
Q Consensus 22 ~s~~~la~avs~aGglG~i~~-------------~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~ 88 (332)
+..++.|....++|..++... .++.+|+.+++ +++.++.|+-...+... .+..+++.+.|+
T Consensus 24 ~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~----I~~av~iPV~~K~rig~--~~e~qilea~Ga 97 (330)
T 2yzr_A 24 VTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEE----IMDAVSIPVMAKCRIGH--TTEALVLEAIGV 97 (330)
T ss_dssp ESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHH----HHHHCSSCEEEEEETTC--HHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHH----HHHhcCCCeEEEEeecc--hHHHHHHHHcCC
Confidence 567889988888887766332 13446776544 44556789887766532 344666677999
Q ss_pred cEEEEccCCCcHHHHHHH--HhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCC-c-------c--------------
Q 020013 89 AVLQVSWGEYSEELVLEA--HSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAG-G-------H-------------- 144 (332)
Q Consensus 89 ~~I~~~~g~~~~~~i~~~--~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaG-G-------h-------------- 144 (332)
|+|..+.-..|.+....+ ++.++++++.+.+..|+.+....|+|.|-..|- +| | |
T Consensus 98 D~Id~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~~~Ga~~i~t~ge-~g~~~~ve~v~H~r~~~~~~~~~s~~ 176 (330)
T 2yzr_A 98 DMIDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGE-AGTGNIVEAVRHMRLMNEAIAQLQRM 176 (330)
T ss_dssp SEEEEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHHHHTCSEEEECCC-TTSCCTHHHHHHHHHHHHHHHHHTTS
T ss_pred CEEehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHHhcCcceeeccCC-CCcccchhHHHHHHHHHHHHHHhccC
Confidence 999653111121111111 134678899999999998888999999999871 11 0 1
Q ss_pred --------------------------------------cCCC-------CchhhhHHHHHHHhCCCCCcE--EeecCcCC
Q 020013 145 --------------------------------------VIGQ-------DGLISLLPMVVDLIGDRDIPI--IAAGGIVD 177 (332)
Q Consensus 145 --------------------------------------~~~~-------~~~~~ll~~i~~~~~~~~iPv--iaaGGI~~ 177 (332)
.+.+ ..++.+++++.+.. ++|| |+.|||.+
T Consensus 177 ~~~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~---~IPVV~VAeGGI~T 253 (330)
T 2yzr_A 177 TDEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLG---RLPVVNFAAGGVAT 253 (330)
T ss_dssp CHHHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHT---SCSSEEEECSCCCS
T ss_pred CHHHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhC---CCCeEEEEECCCCC
Confidence 0000 01237777777765 6898 69999999
Q ss_pred HHHHHHHHHcCcceeeeccccccCccC-CCCHHHHHHHhcCCC
Q 020013 178 ARGYVAALSLGAQGICLGTRFVASEES-YAHPEYKRKLVEMDK 219 (332)
Q Consensus 178 ~~~v~~al~~GA~gV~~GT~fl~t~Es-~~~~~~k~~~~~~~~ 219 (332)
++|+..++.+|||||.+||+++.+... .....+++++...++
T Consensus 254 peda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~~~~ 296 (330)
T 2yzr_A 254 PADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNYDK 296 (330)
T ss_dssp HHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999976432 123455555544443
No 114
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.89 E-value=1e-08 Score=101.99 Aligned_cols=183 Identities=15% Similarity=0.149 Sum_probs=119.8
Q ss_pred HHHHHHHhCCCceeecC--CCCCC--H--HHHHHHHHHHHhhcCCcEEEEeecCCC---------CHHHHHHHHhcCCcE
Q 020013 26 ELVAAVANAGGLGLLRA--PDWEA--P--DYLRDLIRKTRSLTERPFGVGVVLAFP---------HNENIKAILSEKVAV 90 (332)
Q Consensus 26 ~la~avs~aGglG~i~~--~~~~~--~--e~~~~~i~~~r~~~~~p~gvnl~~~~~---------~~~~~~~~~~~~~~~ 90 (332)
++|.+..++|.-++... .+..+ + ....+.++++++....|+-++=-+... ..+.++.+++.|++.
T Consensus 284 ~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~ 363 (555)
T 1jvn_A 284 QLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADK 363 (555)
T ss_dssp HHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCCE
Confidence 57777777775444221 01111 1 123456777776667777654222221 125678888999999
Q ss_pred EEEccCCCc--------------HHHHHHHHh-CC---CEEEEec-----------------------------------
Q 020013 91 LQVSWGEYS--------------EELVLEAHS-AG---VKVVPQV----------------------------------- 117 (332)
Q Consensus 91 I~~~~g~~~--------------~~~i~~~~~-~g---~~v~~~v----------------------------------- 117 (332)
|.++..... +++++++.+ .| +.+...+
T Consensus 364 V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~ 443 (555)
T 1jvn_A 364 VSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTI 443 (555)
T ss_dssp EEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEEE
T ss_pred EEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCcceeEEEEE
Confidence 988633211 245555433 23 2222221
Q ss_pred ---------CCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHH-c
Q 020013 118 ---------GSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS-L 187 (332)
Q Consensus 118 ---------~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~-~ 187 (332)
...+.++.+++.|+|.|++.+.+..|+..+ ..+.+++++.+.+ ++|||++|||++.+++.+++. .
T Consensus 444 ~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G--~d~~li~~l~~~~---~iPVIasGGi~s~~d~~~~~~~~ 518 (555)
T 1jvn_A 444 KGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSG--YDLELIEHVKDAV---KIPVIASSGAGVPEHFEEAFLKT 518 (555)
T ss_dssp TTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSC--CCHHHHHHHHHHC---SSCEEECSCCCSHHHHHHHHHHS
T ss_pred ecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCC--CCHHHHHHHHHhC---CccEEEECCCCCHHHHHHHHHhc
Confidence 135788999999999999998887777534 3589999999887 799999999999999999998 8
Q ss_pred CcceeeeccccccCccCCCCHHHHHHHh
Q 020013 188 GAQGICLGTRFVASEESYAHPEYKRKLV 215 (332)
Q Consensus 188 GA~gV~~GT~fl~t~Es~~~~~~k~~~~ 215 (332)
||+||++|++|...+- .-...|+.+.
T Consensus 519 G~~gvivg~a~~~~~~--~~~e~~~~l~ 544 (555)
T 1jvn_A 519 RADACLGAGMFHRGEF--TVNDVKEYLL 544 (555)
T ss_dssp CCSEEEESHHHHTTSC--CHHHHHHHHH
T ss_pred CChHHHHHHHHHcCCC--CHHHHHHHHH
Confidence 9999999999976532 2234455443
No 115
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=98.88 E-value=1.3e-08 Score=95.65 Aligned_cols=191 Identities=14% Similarity=0.123 Sum_probs=106.5
Q ss_pred hhcC--CccceecCCCCCCCCcHHHHHHHHhCCCceeecCC---------C-----------------C--CCHHHHHHH
Q 020013 5 GMLG--FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAP---------D-----------------W--EAPDYLRDL 54 (332)
Q Consensus 5 ~~l~--~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~---------~-----------------~--~~~e~~~~~ 54 (332)
+++| ++.||+.|.-. .-.+.+.+.+....| +|++..+ + + ...|.+.+.
T Consensus 40 ~~~Gl~f~NPvglAaG~-~~~~~e~~~~l~~~G-~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~G~~n~G~~~~~~~ 117 (354)
T 3tjx_A 40 NLLNNTFANPFMNAAGV-MCTTTEELVAMTESA-SGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAY 117 (354)
T ss_dssp EETTEEESSSEEECTTS-SCSSHHHHHHHHHSS-CSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHH
T ss_pred EECCEEcCCCcEEccCC-CCCCHHHHHHHHHcC-CCEEEeCCcCcccccCCCCCeEEEcccccccccccCCHHHHHHHHH
Confidence 4566 66799987531 135788888888775 4544211 0 0 112333333
Q ss_pred HHHHHhhcCCcEEEEeecCCCC--HHH---HHHHHhcCCcEEEEccCCCc-----------H---HHHHHHHh-CCCEEE
Q 020013 55 IRKTRSLTERPFGVGVVLAFPH--NEN---IKAILSEKVAVLQVSWGEYS-----------E---ELVLEAHS-AGVKVV 114 (332)
Q Consensus 55 i~~~r~~~~~p~gvnl~~~~~~--~~~---~~~~~~~~~~~I~~~~g~~~-----------~---~~i~~~~~-~g~~v~ 114 (332)
+...+...+.|+.+|+....+. .+. +......++|+|.++.++|. . ++++.+++ ...++.
T Consensus 118 ~~~~~~~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g~~~l~~~~~~~~~i~~~v~~~~~~pv~ 197 (354)
T 3tjx_A 118 AAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFG 197 (354)
T ss_dssp HHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------CTTSHHHHHHHHHHHHHHCCSCEE
T ss_pred HHHhhccCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcchhhhccCHHHHHHHHHHHHHHhhcccc
Confidence 3333344568999998875531 112 22233347899998876542 1 22233333 345565
Q ss_pred EecC---C-HH---HHHHHHHc-CCCEEEEecC--------------------CCCcccCCCC---chhhhHHHHHHHhC
Q 020013 115 PQVG---S-FD---EARKAVNA-GVDAIIVQGR--------------------EAGGHVIGQD---GLISLLPMVVDLIG 163 (332)
Q Consensus 115 ~~v~---s-~~---~a~~a~~~-g~D~ivv~G~--------------------eaGGh~~~~~---~~~~ll~~i~~~~~ 163 (332)
.+.. + .. .+....+. +++.+...+. +.||.. ++. .....+.++.+...
T Consensus 198 vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlS-G~~~~~~a~~~v~~~~~~~~ 276 (354)
T 3tjx_A 198 VKMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLG-GRYVLPTALANINAFYRRCP 276 (354)
T ss_dssp EEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEE-GGGGHHHHHHHHHHHHHHCT
T ss_pred cccCCCCCchhHHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccC-chhhHHHHHHHHHHHHHhcC
Confidence 5443 1 11 11222233 4444443211 123333 221 12334555555543
Q ss_pred CCCCcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 164 DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 164 ~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
++|||+.|||.+++|+.+++.+|||.||+||+|+.
T Consensus 277 --~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y 311 (354)
T 3tjx_A 277 --GKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQE 311 (354)
T ss_dssp --TSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHH
T ss_pred --CCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhh
Confidence 68999999999999999999999999999999874
No 116
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.86 E-value=1.4e-09 Score=97.20 Aligned_cols=170 Identities=21% Similarity=0.239 Sum_probs=44.6
Q ss_pred cHHHHHHHHhCCCceeecC-----CCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccC--
Q 020013 24 GPELVAAVANAGGLGLLRA-----PDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG-- 96 (332)
Q Consensus 24 ~~~la~avs~aGglG~i~~-----~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g-- 96 (332)
..+++....++| +..|.. ...... .-.+.++++++..+.|+-++=.+.. .+.++.+++.|+|.|.+.-.
T Consensus 37 ~~~~a~~~~~~G-~~~i~v~d~~~~~~~~~-~~~~~i~~i~~~~~ipvi~~Ggi~~--~~~~~~~l~~Gad~V~ig~~~l 112 (247)
T 3tdn_A 37 LRDWVVEVEKRG-AGEILLTSIDRDGTKSG-YDTEMIRFVRPLTTLPIIASGGAGK--MEHFLEAFLRGADKVSINTAAV 112 (247)
T ss_dssp HHHHHHHHHHTT-CSEEEEEETTTTTCSSC-CCHHHHHHHGGGCCSCEEEESCCCS--HHHHHHHHHTTCSEECCSHHHH
T ss_pred HHHHHHHHHHcC-CCEEEEEecCcccCCCc-ccHHHHHHHHHhCCCCEEEeCCCCC--HHHHHHHHHcCCCeeehhhHHh
Confidence 357777777765 333321 000111 1135677787777888877644432 46677888899999987521
Q ss_pred CCcHHHHHHH-HhCCCE-EE--Eec--------------------CCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchh
Q 020013 97 EYSEELVLEA-HSAGVK-VV--PQV--------------------GSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLI 152 (332)
Q Consensus 97 ~~~~~~i~~~-~~~g~~-v~--~~v--------------------~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~ 152 (332)
..| ++++.+ +..|.. ++ ..+ ...+.++.+.+.|+|.|++.+....|+..+ ..+
T Consensus 113 ~dp-~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~g--~~~ 189 (247)
T 3tdn_A 113 ENP-SLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSG--YDT 189 (247)
T ss_dssp HCT-HHHHHHHHHHC-----------------------------------------------------------------
T ss_pred hCh-HHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCCcCC--CCH
Confidence 112 233332 222211 11 111 123445667789999999977654444312 346
Q ss_pred hhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 153 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 153 ~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
.++.++++.+ ++|||+.|||.+++++.+++.+|||+|++|++++..+.
T Consensus 190 ~~~~~i~~~~---~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~ 237 (247)
T 3tdn_A 190 EMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPS 237 (247)
T ss_dssp ---------------------------------------------------
T ss_pred HHHHHHHHhC---CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcCcH
Confidence 7788887766 79999999999999999999999999999999986654
No 117
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=98.78 E-value=4.2e-08 Score=86.03 Aligned_cols=146 Identities=18% Similarity=0.250 Sum_probs=94.9
Q ss_pred HHHHhhcCCcEEE-EeecCCC----CHHHHHHHHhcCCcEEEEccC--CCc----HHHHHHHHhCCCEEEEecCCHHHHH
Q 020013 56 RKTRSLTERPFGV-GVVLAFP----HNENIKAILSEKVAVLQVSWG--EYS----EELVLEAHSAGVKVVPQVGSFDEAR 124 (332)
Q Consensus 56 ~~~r~~~~~p~gv-nl~~~~~----~~~~~~~~~~~~~~~I~~~~g--~~~----~~~i~~~~~~g~~v~~~v~s~~~a~ 124 (332)
..+++.++.|++. |+-..++ -+-.++.+.+.|+|.|.+... ..+ .+.++.+++.|+.++..+++.++..
T Consensus 46 ~~v~~~~~~~v~aqd~~~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~~e~~ 125 (219)
T 2h6r_A 46 RMIVENVNIPVYAQHIDNINPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNINTSK 125 (219)
T ss_dssp HHHHHHCCSCBEESCCCSCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSSHHHH
T ss_pred HHHHHHcCCcEEEEECChhhcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCchHHH
Confidence 3344444677766 5332221 012378889999999999533 122 2445556778999999999888888
Q ss_pred HHHHcCCCEEEEecCCC-C-c---ccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 125 KAVNAGVDAIIVQGREA-G-G---HVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 125 ~a~~~g~D~ivv~G~ea-G-G---h~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
.+.+.+.++|-+....+ | | ++..+...-..+..+++ ... ++||++.|||.+++++..+...|+|||.+||+++
T Consensus 126 ~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~-~~~-~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~ 203 (219)
T 2h6r_A 126 AVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKE-INK-DVKVLCGAGISKGEDVKAALDLGAEGVLLASGVV 203 (219)
T ss_dssp HHTTTCCSEEEECCCC--------------CSHHHHHHHHH-HCT-TCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHH
T ss_pred HHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHh-ccC-CCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHh
Confidence 88888999887766554 2 2 11111101122222222 221 6899999999889999999999999999999999
Q ss_pred cCcc
Q 020013 200 ASEE 203 (332)
Q Consensus 200 ~t~E 203 (332)
..++
T Consensus 204 ~~~d 207 (219)
T 2h6r_A 204 KAKN 207 (219)
T ss_dssp TCSS
T ss_pred Cccc
Confidence 7644
No 118
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.70 E-value=1.6e-06 Score=81.66 Aligned_cols=115 Identities=17% Similarity=0.157 Sum_probs=80.8
Q ss_pred HHHhcCCcEEEEccCC---------C-------------------cHHHHHHHHhC-CC-EEEEecC------------C
Q 020013 82 AILSEKVAVLQVSWGE---------Y-------------------SEELVLEAHSA-GV-KVVPQVG------------S 119 (332)
Q Consensus 82 ~~~~~~~~~I~~~~g~---------~-------------------~~~~i~~~~~~-g~-~v~~~v~------------s 119 (332)
.+.+.|.|.|.+|.++ + ..++++.+++. |. +|...++ +
T Consensus 169 ~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~ 248 (365)
T 2gou_A 169 NAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADP 248 (365)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSH
T ss_pred HHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCC
Confidence 3567899999998643 1 12445666542 21 5655332 2
Q ss_pred HHH----HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeee
Q 020013 120 FDE----ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICL 194 (332)
Q Consensus 120 ~~~----a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~ 194 (332)
.++ ++.+.+.|+|+|.+.+....+. +...+.++..+++.+ ++|||+.||| +++++.++++.| ||+|++
T Consensus 249 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~---~~~~~~~~~~i~~~~---~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 249 ILTYTAAAALLNKHRIVYLHIAEVDWDDA---PDTPVSFKRALREAY---QGVLIYAGRY-NAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBC---CCCCHHHHHHHHHHC---CSEEEEESSC-CHHHHHHHHHTTSCSEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCC---CCccHHHHHHHHHHC---CCcEEEeCCC-CHHHHHHHHHCCCcceehh
Confidence 233 5667789999999976421111 112256778888877 7999999999 999999999998 999999
Q ss_pred ccccccCcc
Q 020013 195 GTRFVASEE 203 (332)
Q Consensus 195 GT~fl~t~E 203 (332)
|+.|+..++
T Consensus 322 gR~~i~~P~ 330 (365)
T 2gou_A 322 GRPFIANPD 330 (365)
T ss_dssp CHHHHHCTT
T ss_pred cHHHHhCch
Confidence 999998643
No 119
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.68 E-value=5.5e-07 Score=79.68 Aligned_cols=179 Identities=15% Similarity=0.118 Sum_probs=116.0
Q ss_pred CcchhhcCCccceecCCCCCCCCcHHHHHHHHhCCC----ceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCC
Q 020013 1 MGWRGMLGFEYGIVQAPLGPDISGPELVAAVANAGG----LGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH 76 (332)
Q Consensus 1 ~~~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGg----lG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~ 76 (332)
|++.++-.-+|=...+|=- -.+.+.+.++.++|. +|. + .-.+.+.+.+.++++|+ ++.|+.+ +....
T Consensus 1 ~~~~~~~~~~~i~~gDP~~--~~t~~~~~~l~~~GaD~ielG~--S-~Gvt~~~~~~~v~~ir~-~~~Pivl--m~y~~- 71 (240)
T 1viz_A 1 MSLYDVTEWKHVFKLDPNK--DLPDEQLEILCESGTDAVIIGG--S-DGVTEDNVLRMMSKVRR-FLVPCVL--EVSAI- 71 (240)
T ss_dssp -CCSCGGGCCEEEEECTTS--CCCHHHHHHHHTSCCSEEEECC-------CHHHHHHHHHHHTT-SSSCEEE--ECSCG-
T ss_pred CCccccCcceEEEeeCCCc--cccHHHHHHHHHcCCCEEEECC--C-CCCCHHHHHHHHHHhhC-cCCCEEE--ecCcc-
Confidence 5554444445656666643 467788888888874 332 2 23578888899999998 7788765 22110
Q ss_pred HHHHHHHHhcCCcEEEEcc--CCCcHHH-----HHHHHhCC-----CEEEE----ec---------------CCHHHHHH
Q 020013 77 NENIKAILSEKVAVLQVSW--GEYSEEL-----VLEAHSAG-----VKVVP----QV---------------GSFDEARK 125 (332)
Q Consensus 77 ~~~~~~~~~~~~~~I~~~~--g~~~~~~-----i~~~~~~g-----~~v~~----~v---------------~s~~~a~~ 125 (332)
+.+ +.++|.+.+.- .....++ .+.+++.| +.++. .+ .+++.++.
T Consensus 72 -n~i----~~G~dg~iiPdLp~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~ 146 (240)
T 1viz_A 72 -EAI----VPGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVA 146 (240)
T ss_dssp -GGC----CSCCSEEEEEEETTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHH
T ss_pred -ccc----cCCCCEEEEcccCcccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHH
Confidence 111 56888887641 1112234 46677777 65554 21 33566666
Q ss_pred HHHcCC----CEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 126 AVNAGV----DAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 126 a~~~g~----D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
..+.|. .+|-+.+ . |. .....++.++++... ++|+++.|||++++++.+++. |||+|++||++...
T Consensus 147 ~a~~g~~~~~~~VYl~s--~-G~----~~~~~~i~~i~~~~~--~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~ 216 (240)
T 1viz_A 147 YARVSELLQLPIFYLEY--S-GV----LGDIEAVKKTKAVLE--TSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYED 216 (240)
T ss_dssp HHHHHHHTTCSEEEEEC--T-TS----CCCHHHHHHHHHTCS--SSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHC
T ss_pred HHHhCcccCCCEEEEeC--C-Cc----cChHHHHHHHHHhcC--CCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhC
Confidence 665553 6776665 2 32 234778888887642 689999999999999999998 99999999999976
Q ss_pred cc
Q 020013 202 EE 203 (332)
Q Consensus 202 ~E 203 (332)
.|
T Consensus 217 ~~ 218 (240)
T 1viz_A 217 FD 218 (240)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 120
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=98.67 E-value=1.7e-06 Score=81.77 Aligned_cols=116 Identities=16% Similarity=0.091 Sum_probs=80.3
Q ss_pred HHHhcCCcEEEEccCC---------C-------------------cHHHHHHHHhC-CC-EEEEecC------------C
Q 020013 82 AILSEKVAVLQVSWGE---------Y-------------------SEELVLEAHSA-GV-KVVPQVG------------S 119 (332)
Q Consensus 82 ~~~~~~~~~I~~~~g~---------~-------------------~~~~i~~~~~~-g~-~v~~~v~------------s 119 (332)
.+.++|.|.|.+|.++ + ..++++.+++. |. +|...++ +
T Consensus 174 ~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~ 253 (377)
T 2r14_A 174 RAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEP 253 (377)
T ss_dssp HHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCH
T ss_pred HHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCC
Confidence 4467899999998653 1 13455666553 32 5665542 1
Q ss_pred HHH----HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeee
Q 020013 120 FDE----ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICL 194 (332)
Q Consensus 120 ~~~----a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~ 194 (332)
.++ ++.+.+.|+|+|-+.+....+.. ....+.++.++++.+ ++|||+.||| +++++.++++.| ||+|.+
T Consensus 254 ~~~~~~la~~le~~Gvd~i~v~~~~~~~~~--~~~~~~~~~~ik~~~---~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 254 EAMAFYLAGELDRRGLAYLHFNEPDWIGGD--ITYPEGFREQMRQRF---KGGLIYCGNY-DAGRAQARLDDNTADAVAF 327 (377)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC--------CCCTTHHHHHHHHC---CSEEEEESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCC--CcchHHHHHHHHHHC---CCCEEEECCC-CHHHHHHHHHCCCceEEee
Confidence 233 56677899999999653211110 111366778888887 7999999999 799999999998 999999
Q ss_pred ccccccCcc
Q 020013 195 GTRFVASEE 203 (332)
Q Consensus 195 GT~fl~t~E 203 (332)
|+.|+..++
T Consensus 328 gR~~l~~P~ 336 (377)
T 2r14_A 328 GRPFIANPD 336 (377)
T ss_dssp SHHHHHCTT
T ss_pred cHHHHhCch
Confidence 999998754
No 121
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=98.63 E-value=2.9e-06 Score=79.92 Aligned_cols=74 Identities=16% Similarity=0.268 Sum_probs=58.1
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeeccccccC
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVAS 201 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~GT~fl~t 201 (332)
++.+.+.|+|+|-+.+...-+ .....+.++.++++.+ ++||++.||| +++++.++++.| ||+|.+|+.++..
T Consensus 257 a~~l~~~G~d~i~v~~~~~~~---~~~~~~~~~~~v~~~~---~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~~ 329 (364)
T 1vyr_A 257 IEELAKRGIAYLHMSETDLAG---GKPYSEAFRQKVRERF---HGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIAN 329 (364)
T ss_dssp HHHHHHTTCSEEEEECCBTTB---CCCCCHHHHHHHHHHC---CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHhCCCEEEEecCcccC---CCcccHHHHHHHHHHC---CCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHhC
Confidence 566788999999997532111 1112356777888877 7999999999 999999999998 9999999999986
Q ss_pred cc
Q 020013 202 EE 203 (332)
Q Consensus 202 ~E 203 (332)
++
T Consensus 330 P~ 331 (364)
T 1vyr_A 330 PD 331 (364)
T ss_dssp TT
T ss_pred hh
Confidence 44
No 122
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.59 E-value=1.1e-06 Score=78.47 Aligned_cols=190 Identities=20% Similarity=0.266 Sum_probs=121.2
Q ss_pred cCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCC-----------------CCCH-HHHHHHHHHHHhhc-CCcEE
Q 020013 7 LGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPD-----------------WEAP-DYLRDLIRKTRSLT-ERPFG 67 (332)
Q Consensus 7 l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~-----------------~~~~-e~~~~~i~~~r~~~-~~p~g 67 (332)
..-..|||.++-+ + -+.+..++.||..+|-..+ |.+. +...+.-+++-... +.|+-
T Consensus 24 i~~~~~iig~gaG----t-GlsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~ 98 (286)
T 2p10_A 24 IRAGEPIIGGGAG----T-GLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVL 98 (286)
T ss_dssp HHTTCCEEEEEES----S-HHHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEE
T ss_pred HhcCCceEEEecc----c-chhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEE
Confidence 3356799955542 2 4556677788888874311 1122 22233333333222 56766
Q ss_pred EEeecCCCC---HHHHHHHHhcCCcEEEEccC--------------C---C---cHHHHHHHHhCCCEEEEecCCHHHHH
Q 020013 68 VGVVLAFPH---NENIKAILSEKVAVLQVSWG--------------E---Y---SEELVLEAHSAGVKVVPQVGSFDEAR 124 (332)
Q Consensus 68 vnl~~~~~~---~~~~~~~~~~~~~~I~~~~g--------------~---~---~~~~i~~~~~~g~~v~~~v~s~~~a~ 124 (332)
.++-..+|. ...++.+.+.|+..| .++- . - -.+.++++++.|+..++.+.|+++++
T Consensus 99 Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~ 177 (286)
T 2p10_A 99 AGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAV 177 (286)
T ss_dssp EEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHH
T ss_pred EEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHH
Confidence 664444442 456788888999999 4432 0 0 12466778889999999999999999
Q ss_pred HHHHcCCCEEEEecC-CCCcccCC--CCch---hhhHHHHHHHhCC--CCCcEEeec-CcCCHHHHHHHHHc--Ccceee
Q 020013 125 KAVNAGVDAIIVQGR-EAGGHVIG--QDGL---ISLLPMVVDLIGD--RDIPIIAAG-GIVDARGYVAALSL--GAQGIC 193 (332)
Q Consensus 125 ~a~~~g~D~ivv~G~-eaGGh~~~--~~~~---~~ll~~i~~~~~~--~~iPviaaG-GI~~~~~v~~al~~--GA~gV~ 193 (332)
...++|+|+|+++-. ..||-.+. ..+. ...+.++.++.+. .++.|++.| ||.+++|+..++.+ |++|+.
T Consensus 178 amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~ 257 (286)
T 2p10_A 178 AMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFY 257 (286)
T ss_dssp HHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEE
T ss_pred HHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEE
Confidence 999999999999744 33443311 1121 3455555554421 266677666 99999999999999 999999
Q ss_pred eccccccCc
Q 020013 194 LGTRFVASE 202 (332)
Q Consensus 194 ~GT~fl~t~ 202 (332)
.+|.+...+
T Consensus 258 gASsier~p 266 (286)
T 2p10_A 258 GASSMERLP 266 (286)
T ss_dssp ESHHHHHHH
T ss_pred eehhhhcCC
Confidence 999987663
No 123
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.54 E-value=9.6e-07 Score=77.80 Aligned_cols=169 Identities=18% Similarity=0.120 Sum_probs=110.0
Q ss_pred cceecCCCCCCCCcHHHHHHHHhCCC----ceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhc
Q 020013 11 YGIVQAPLGPDISGPELVAAVANAGG----LGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSE 86 (332)
Q Consensus 11 ~Pii~apM~~g~s~~~la~avs~aGg----lG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~ 86 (332)
|=...+|=- -.+.+.+.++.++|. +|. + ...+.+.+.+.++++|+ ++.|+.+ +...+ +.+ +.
T Consensus 11 ~it~gDP~~--~~t~~~~~~l~~~GaD~IelG~--S-~g~t~~~~~~~v~~ir~-~~~Pivl--~~y~~--n~i----~~ 76 (234)
T 2f6u_A 11 HITKLDPDR--TNTDEIIKAVADSGTDAVMISG--T-QNVTYEKARTLIEKVSQ-YGLPIVV--EPSDP--SNV----VY 76 (234)
T ss_dssp EEEEECTTS--CCCHHHHHHHHTTTCSEEEECC--C-TTCCHHHHHHHHHHHTT-SCCCEEE--CCSSC--CCC----CC
T ss_pred EEEeeCCCc--cccHHHHHHHHHcCCCEEEECC--C-CCCCHHHHHHHHHHhcC-CCCCEEE--ecCCc--chh----hc
Confidence 444455642 356777888888773 333 2 23678889999999998 7778665 22211 111 66
Q ss_pred CCcEEEEcc--CCCcHHHH-----HHH-------HhCC-----CEEEEe----c---------------CCHHHHHHHHH
Q 020013 87 KVAVLQVSW--GEYSEELV-----LEA-------HSAG-----VKVVPQ----V---------------GSFDEARKAVN 128 (332)
Q Consensus 87 ~~~~I~~~~--g~~~~~~i-----~~~-------~~~g-----~~v~~~----v---------------~s~~~a~~a~~ 128 (332)
++|.+.+.- .....+++ +.+ ++.| +.++.. + .+++.++...+
T Consensus 77 gvDg~iipdLp~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~ 156 (234)
T 2f6u_A 77 DVDYLFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYAL 156 (234)
T ss_dssp CSSEEEEEEETTBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHH
T ss_pred CCCEEEEcccCCCCCHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHH
Confidence 888887641 11122333 333 4455 554442 1 15555666666
Q ss_pred cCC-----CEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 129 AGV-----DAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 129 ~g~-----D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
.|. .+|.+.+ . |. .....++.++++... ++|+++.|||++++++.+++. |||+|++||++....|
T Consensus 157 ~g~~~l~~~~Vyl~~--~-G~----~~~~~~i~~i~~~~~--~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~~~~ 226 (234)
T 2f6u_A 157 VGEKLFNLPIIYIEY--S-GT----YGNPELVAEVKKVLD--KARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEKGI 226 (234)
T ss_dssp HHHHTTCCSEEEEEC--T-TS----CCCHHHHHHHHHHCS--SSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHHHCH
T ss_pred hhhhhcCCCEEEEeC--C-CC----cchHHHHHHHHHhCC--CCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHhCHH
Confidence 655 7777766 2 22 234778888888752 689999999999999999999 9999999999986543
No 124
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=98.51 E-value=6.8e-06 Score=77.67 Aligned_cols=118 Identities=14% Similarity=0.080 Sum_probs=79.0
Q ss_pred HHHHhcCCcEEEEccCC---------C-------------------cHHHHHHHHhC-CC-EEEEecC------------
Q 020013 81 KAILSEKVAVLQVSWGE---------Y-------------------SEELVLEAHSA-GV-KVVPQVG------------ 118 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~---------~-------------------~~~~i~~~~~~-g~-~v~~~v~------------ 118 (332)
+.+.++|.|.|.+|.++ + ..++++.+++. |. +|...++
T Consensus 174 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~ 253 (376)
T 1icp_A 174 RNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTN 253 (376)
T ss_dssp HHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSC
T ss_pred HHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCC
Confidence 35567899999998643 1 12445555542 31 5665553
Q ss_pred C----HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceee
Q 020013 119 S----FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGIC 193 (332)
Q Consensus 119 s----~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~ 193 (332)
+ .+-++.+.+.|+|+|-+.+....... .....+.++..+++.+ ++||++.||| +++++.++|+.| ||.|.
T Consensus 254 ~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~-~~~~~~~~~~~vr~~~---~iPvi~~G~i-~~~~a~~~l~~g~aD~V~ 328 (376)
T 1icp_A 254 PTALGLYMVESLNKYDLAYCHVVEPRMKTAW-EKIECTESLVPMRKAY---KGTFIVAGGY-DREDGNRALIEDRADLVA 328 (376)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECCSCCC-------CCCCSHHHHHHC---CSCEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCcccCCC-CccccHHHHHHHHHHc---CCCEEEeCCC-CHHHHHHHHHCCCCcEEe
Confidence 1 23345667889999999653211000 0001245567788777 7999999999 999999999988 99999
Q ss_pred eccccccCcc
Q 020013 194 LGTRFVASEE 203 (332)
Q Consensus 194 ~GT~fl~t~E 203 (332)
+|+.|+..++
T Consensus 329 ~gR~~l~~P~ 338 (376)
T 1icp_A 329 YGRLFISNPD 338 (376)
T ss_dssp ESHHHHHCTT
T ss_pred ecHHHHhCcc
Confidence 9999998754
No 125
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=98.48 E-value=4.5e-07 Score=79.75 Aligned_cols=110 Identities=19% Similarity=0.235 Sum_probs=71.6
Q ss_pred HHHHHhcCCcEEEE--ccCC----CcH---HHHHHHHhCCCEEEEec------CCHHH----HHHHHHcCCCEEEEe-cC
Q 020013 80 IKAILSEKVAVLQV--SWGE----YSE---ELVLEAHSAGVKVVPQV------GSFDE----ARKAVNAGVDAIIVQ-GR 139 (332)
Q Consensus 80 ~~~~~~~~~~~I~~--~~g~----~~~---~~i~~~~~~g~~v~~~v------~s~~~----a~~a~~~g~D~ivv~-G~ 139 (332)
.+.+.+.++|.|.+ +.|+ ... +.++.+++..-+++.++ .+.++ ++.+.++|+|+|... |+
T Consensus 76 ~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~ 155 (225)
T 1mzh_A 76 AVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGF 155 (225)
T ss_dssp HHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred HHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 45677889999985 3222 122 23445555321333333 24333 566788999999542 33
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecc
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 196 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT 196 (332)
..|| .++..++.+++.++. ++||+++|||.+++++.+++.+|||.|.+++
T Consensus 156 ~~gg------a~~~~i~~v~~~v~~-~ipVia~GGI~t~~da~~~l~aGA~~iG~s~ 205 (225)
T 1mzh_A 156 APRG------TTLEEVRLIKSSAKG-RIKVKASGGIRDLETAISMIEAGADRIGTSS 205 (225)
T ss_dssp SSSC------CCHHHHHHHHHHHTT-SSEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CCCC------CCHHHHHHHHHHhCC-CCcEEEECCCCCHHHHHHHHHhCchHHHHcc
Confidence 2222 346777788777632 6999999999999999999999999655443
No 126
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.48 E-value=1.7e-06 Score=81.02 Aligned_cols=120 Identities=15% Similarity=0.170 Sum_probs=83.6
Q ss_pred HHHHhcCCcEEEEccCC---------C-------------------cHHHHHHHHhC---CCEEEEecC---------CH
Q 020013 81 KAILSEKVAVLQVSWGE---------Y-------------------SEELVLEAHSA---GVKVVPQVG---------SF 120 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~---------~-------------------~~~~i~~~~~~---g~~v~~~v~---------s~ 120 (332)
+.+.++|.|.|.+|.++ + ..++++.+++. +.+|...++ +.
T Consensus 159 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~ 238 (349)
T 3hgj_A 159 RRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSL 238 (349)
T ss_dssp HHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCH
T ss_pred HHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCH
Confidence 44567899999998653 1 12455556553 455665443 34
Q ss_pred HH----HHHHHHcCCCEEEEec-CCCCcc-c-CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-ccee
Q 020013 121 DE----ARKAVNAGVDAIIVQG-REAGGH-V-IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGI 192 (332)
Q Consensus 121 ~~----a~~a~~~g~D~ivv~G-~eaGGh-~-~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV 192 (332)
++ ++.+.+.|+|+|-+.. ...... . .++...+.++.++++.+ ++||++.|||.+++++.++++.| ||.|
T Consensus 239 ~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~---~iPVi~~Ggi~t~e~a~~~l~~G~aD~V 315 (349)
T 3hgj_A 239 EDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV---GLRTGAVGLITTPEQAETLLQAGSADLV 315 (349)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH---CCEEEECSSCCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc---CceEEEECCCCCHHHHHHHHHCCCceEE
Confidence 44 5566788999999863 211100 0 01112466778888887 79999999999999999999999 9999
Q ss_pred eeccccccCcc
Q 020013 193 CLGTRFVASEE 203 (332)
Q Consensus 193 ~~GT~fl~t~E 203 (332)
.+|+.|+..++
T Consensus 316 ~iGR~~lanPd 326 (349)
T 3hgj_A 316 LLGRVLLRDPY 326 (349)
T ss_dssp EESTHHHHCTT
T ss_pred EecHHHHhCch
Confidence 99999997654
No 127
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=98.47 E-value=1.7e-06 Score=80.66 Aligned_cols=120 Identities=15% Similarity=0.141 Sum_probs=83.5
Q ss_pred HHHHhcCCcEEEEccCC---------C-------------------cHHHHHHHHhC-CCEEEEecC-------------
Q 020013 81 KAILSEKVAVLQVSWGE---------Y-------------------SEELVLEAHSA-GVKVVPQVG------------- 118 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~---------~-------------------~~~~i~~~~~~-g~~v~~~v~------------- 118 (332)
+.+.++|.|.|.+|.++ + ..++++.+++. +.+|...++
T Consensus 151 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~ 230 (340)
T 3gr7_A 151 RRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKD 230 (340)
T ss_dssp HHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGG
T ss_pred HHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHH
Confidence 34567899999998652 1 12445555543 556654433
Q ss_pred CHHHHHHHHHcCCCEEEEec-CCCCcc-cCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeec
Q 020013 119 SFDEARKAVNAGVDAIIVQG-REAGGH-VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLG 195 (332)
Q Consensus 119 s~~~a~~a~~~g~D~ivv~G-~eaGGh-~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~G 195 (332)
..+-++.+.+.|+|+|-+.. ....-. ..++...+.++.++++.+ ++||++.|||.+++++.+++..| ||.|++|
T Consensus 231 ~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~---~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 231 YVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA---DIPTGAVGLITSGWQAEEILQNGRADLVFLG 307 (340)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT---TCCEEEESSCCCHHHHHHHHHTTSCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc---CCcEEeeCCCCCHHHHHHHHHCCCeeEEEec
Confidence 13456677889999999863 211100 001122467788888887 79999999999999999999999 9999999
Q ss_pred cccccCcc
Q 020013 196 TRFVASEE 203 (332)
Q Consensus 196 T~fl~t~E 203 (332)
+.|+..++
T Consensus 308 R~~lanPd 315 (340)
T 3gr7_A 308 RELLRNPY 315 (340)
T ss_dssp HHHHHCTT
T ss_pred HHHHhCch
Confidence 99998754
No 128
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=98.44 E-value=6.9e-06 Score=69.84 Aligned_cols=175 Identities=11% Similarity=0.126 Sum_probs=112.4
Q ss_pred CcchhhcCCccceecCCCCCCCCcHHHHHHHHhCC-CceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeec---CCCC
Q 020013 1 MGWRGMLGFEYGIVQAPLGPDISGPELVAAVANAG-GLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVL---AFPH 76 (332)
Q Consensus 1 ~~~~~~l~~~~Pii~apM~~g~s~~~la~avs~aG-glG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~---~~~~ 76 (332)
|++...|. ++||| |- +.+.+....+.+.- -.-|+..+ +...+.+.++++++..+. .-|++=. -..+
T Consensus 1 ~~~~~~~~-~~piI--~A---vr~~~~l~~al~s~~~~ifll~g---~i~~l~~~v~~lk~~~K~-v~Vh~Dli~Gls~d 70 (192)
T 3kts_A 1 MSLELPFS-NQSII--PA---AHNQKDMEKILELDLTYMVMLET---HVAQLKALVKYAQAGGKK-VLLHADLVNGLKND 70 (192)
T ss_dssp --CCCSCT-TCCEE--EE---ESSSHHHHHHTTSSCCEEEECSE---ETTTHHHHHHHHHHTTCE-EEEEGGGEETCCCS
T ss_pred Cchhhhhh-cCCEE--EE---ecCHHHHHHHHcCCCCEEEEecC---cHHHHHHHHHHHHHcCCe-EEEecCchhccCCc
Confidence 55444444 68999 32 34434333332332 34444332 334567778888876543 3344311 1234
Q ss_pred HHHHHHHHh-cCCcEEEEccCCCcHHHHHHHHhCCCEEEEec---CC--HHH-HHHHHHcCCCEEEEecCCCCcccCCCC
Q 020013 77 NENIKAILS-EKVAVLQVSWGEYSEELVLEAHSAGVKVVPQV---GS--FDE-ARKAVNAGVDAIIVQGREAGGHVIGQD 149 (332)
Q Consensus 77 ~~~~~~~~~-~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v---~s--~~~-a~~a~~~g~D~ivv~G~eaGGh~~~~~ 149 (332)
+..++.+.+ .++|.|... -...++.+++.|+..+..+ .| .+. .+...+..+|++=+- .|..
T Consensus 71 ~~ai~fL~~~~~pdGIIsT----k~~~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiL--------PGi~ 138 (192)
T 3kts_A 71 DYAIDFLCTEICPDGIIST----RGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELL--------PGII 138 (192)
T ss_dssp HHHHHHHHHTTCCSEEEES----CHHHHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEE--------CTTC
T ss_pred HHHHHHHHhCCCCCEEEeC----cHHHHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEEC--------Cchh
Confidence 566666665 489998765 3568899999999877543 22 222 333456689988542 1222
Q ss_pred chhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCc
Q 020013 150 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 150 ~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
...++++++.+ ++|||+.|+|.+.+++.+++.+||++|..++..++.-
T Consensus 139 --p~iI~~i~~~~---~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~~ 186 (192)
T 3kts_A 139 --PEQVQKMTQKL---HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEG 186 (192)
T ss_dssp --HHHHHHHHHHH---CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGTT
T ss_pred --HHHHHHHHHhc---CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhCc
Confidence 25778888877 7999999999999999999999999999999988753
No 129
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=98.44 E-value=2e-06 Score=75.05 Aligned_cols=139 Identities=10% Similarity=0.047 Sum_probs=88.8
Q ss_pred HHHHHHhh---cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCC---cHHHHHHHHhCCCEEEE----ecCCHHHH
Q 020013 54 LIRKTRSL---TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVVP----QVGSFDEA 123 (332)
Q Consensus 54 ~i~~~r~~---~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~---~~~~i~~~~~~g~~v~~----~v~s~~~a 123 (332)
.++.+|+. ++.++-+.++. .+ +...+.+.+.|+|+|.+|.... ....++.+++.|.+++. .++ ....
T Consensus 46 ~i~~l~~~~p~~~v~lD~kl~d-ip-~t~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~t-~~~~ 122 (216)
T 1q6o_A 46 AVRDLKALYPHKIVLADAKIAD-AG-KILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWT-WEQA 122 (216)
T ss_dssp HHHHHHHHCTTSEEEEEEEECS-CH-HHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCCC-HHHH
T ss_pred HHHHHHHhCCCCeEEEEEEecc-cH-HHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCCC-hhhH
Confidence 35555554 23445556553 22 4556778889999999985322 23455667778888754 333 4455
Q ss_pred HHHHHcCCCEEEEec----CCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 124 RKAVNAGVDAIIVQG----REAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 124 ~~a~~~g~D~ivv~G----~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
..+.+.|.+.+++.- .+.| .. + ....+..+++..+. ++||++.||| +++++.+++.+|||++++||+++
T Consensus 123 ~~l~~~~~~~~vl~~a~~~~~~G-~~-g---~~~~i~~lr~~~~~-~~~i~v~GGI-~~~~~~~~~~aGad~ivvG~~I~ 195 (216)
T 1q6o_A 123 QQWRDAGIGQVVYHRSRDAQAAG-VA-W---GEADITAIKRLSDM-GFKVTVTGGL-ALEDLPLFKGIPIHVFIAGRSIR 195 (216)
T ss_dssp HHHHHTTCCEEEEECCHHHHHTT-CC-C---CHHHHHHHHHHHHT-TCEEEEESSC-CGGGGGGGTTSCCSEEEESHHHH
T ss_pred HHHHhcCcHHHHHHHHHHHHhcC-CC-C---CHHHHHHHHHhcCC-CCcEEEECCc-ChhhHHHHHHcCCCEEEEeehhc
Confidence 556666877777621 1122 11 1 13344555554421 5889999999 68999999999999999999988
Q ss_pred cCc
Q 020013 200 ASE 202 (332)
Q Consensus 200 ~t~ 202 (332)
.++
T Consensus 196 ~a~ 198 (216)
T 1q6o_A 196 DAA 198 (216)
T ss_dssp TSS
T ss_pred CCC
Confidence 754
No 130
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.40 E-value=3.4e-06 Score=85.66 Aligned_cols=120 Identities=16% Similarity=0.176 Sum_probs=79.0
Q ss_pred HHHHhcCCcEEEEccCC---------C-------------------cHHHHHHHHhC---CCEEEEecC---------CH
Q 020013 81 KAILSEKVAVLQVSWGE---------Y-------------------SEELVLEAHSA---GVKVVPQVG---------SF 120 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~---------~-------------------~~~~i~~~~~~---g~~v~~~v~---------s~ 120 (332)
+.+.++|.|.|.+|.++ + ..++++.+++. +.+++..++ +.
T Consensus 148 ~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~ 227 (671)
T 1ps9_A 148 QLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTF 227 (671)
T ss_dssp HHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCH
T ss_pred HHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCH
Confidence 34567899999998543 1 12445555542 556654221 33
Q ss_pred H----HHHHHHHcCCCEEEEecCCCCccc------CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-c
Q 020013 121 D----EARKAVNAGVDAIIVQGREAGGHV------IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-A 189 (332)
Q Consensus 121 ~----~a~~a~~~g~D~ivv~G~eaGGh~------~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A 189 (332)
+ .++.+.+.|+|+|-+.+....... .+....+.++.++++.+ ++||++.|||.+++++.++++.| |
T Consensus 228 ~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~iPvi~~Ggi~~~~~a~~~l~~g~a 304 (671)
T 1ps9_A 228 AETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV---SLPLVTTNRINDPQVADDILSRGDA 304 (671)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC---SSCEEECSSCCSHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc---CceEEEeCCCCCHHHHHHHHHcCCC
Confidence 3 355667889999988542110000 00111235566666655 79999999999999999999998 9
Q ss_pred ceeeeccccccCcc
Q 020013 190 QGICLGTRFVASEE 203 (332)
Q Consensus 190 ~gV~~GT~fl~t~E 203 (332)
|+|.+|+.|+..++
T Consensus 305 D~V~~gR~~l~~P~ 318 (671)
T 1ps9_A 305 DMVSMARPFLADAE 318 (671)
T ss_dssp SEEEESTHHHHCTT
T ss_pred CEEEeCHHHHhCcH
Confidence 99999999998753
No 131
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.37 E-value=7.2e-07 Score=79.39 Aligned_cols=80 Identities=21% Similarity=0.297 Sum_probs=65.0
Q ss_pred CHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccc
Q 020013 119 SFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 119 s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~f 198 (332)
..+.++.+.+.|+|.|.+...+..+.. ....+.++.++++.+ ++||++.|||.+++++.+++..|||+|.+||.+
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~--~~~~~~~i~~i~~~~---~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~ 111 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTK--SGYDTEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLRGADKVSINTAA 111 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCS--SCCCHHHHHHHGGGC---CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHH
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCC--CcccHHHHHHHHHhC---CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHH
Confidence 356778888999999998766544322 123467888888776 799999999999999999999999999999999
Q ss_pred ccCcc
Q 020013 199 VASEE 203 (332)
Q Consensus 199 l~t~E 203 (332)
+..++
T Consensus 112 l~dp~ 116 (247)
T 3tdn_A 112 VENPS 116 (247)
T ss_dssp HHCTH
T ss_pred hhChH
Confidence 96654
No 132
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.34 E-value=3.9e-06 Score=73.49 Aligned_cols=172 Identities=13% Similarity=0.117 Sum_probs=109.1
Q ss_pred ccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCC-CCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCC
Q 020013 10 EYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDW-EAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKV 88 (332)
Q Consensus 10 ~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~-~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~ 88 (332)
+|=...+|=- ..+.+.+.+++++|.=.++-.++. .+.+.+.+.++++|+ ++.|+-. +...+ +.+ ..++
T Consensus 8 ~h~~~iDPdk--~~~~~~~~~~~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~-~~~Pvvl--fp~~~--~~v----~~ga 76 (228)
T 3vzx_A 8 KHVFKLDPNK--DLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR-FLVPCVL--EVSAI--EAI----VPGF 76 (228)
T ss_dssp CEEEEECTTS--CCCTTHHHHHHTSSCSEEEECCCSCCCHHHHHHHHHHHTT-SSSCEEE--ECSCG--GGC----CSCC
T ss_pred eEEEeECCCC--CCCHHHHHHHHHcCCCEEEECCcCCCCHHHHHHHHHHhhc-cCCCEEE--eCCCH--HHc----cccC
Confidence 3445556643 334456666777775444433222 578889999999998 7788654 33222 221 3588
Q ss_pred cEEEEc---cCCCcHHHH-----HHHHhCCC-----EEEEe----cC---------------CHHHHH----HHHHcCCC
Q 020013 89 AVLQVS---WGEYSEELV-----LEAHSAGV-----KVVPQ----VG---------------SFDEAR----KAVNAGVD 132 (332)
Q Consensus 89 ~~I~~~---~g~~~~~~i-----~~~~~~g~-----~v~~~----v~---------------s~~~a~----~a~~~g~D 132 (332)
|.+.+. .+. .++++ +.+++.|. .+++. +. +++++. .+.-.|.+
T Consensus 77 D~~l~pslln~~-~~~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~ 155 (228)
T 3vzx_A 77 DLYFIPSVLNSK-NADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLP 155 (228)
T ss_dssp SEEEEEEETTBS-SGGGTTHHHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCS
T ss_pred CEEEEeeecCCC-CcchhhhHHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCC
Confidence 888764 122 22333 55666664 44442 11 223332 23345789
Q ss_pred EEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 133 AIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 133 ~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
.|-+++ .| .. + ...++.++++... ++|+++.|||++++++.+++ .|||+|++||++...+|
T Consensus 156 ~VYld~--sG-~~-~---~~~~i~~i~~~~~--~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p~ 216 (228)
T 3vzx_A 156 IFYLEY--SG-VL-G---DIEAVKKTKAVLE--TSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDFD 216 (228)
T ss_dssp EEEEEC--TT-SC-C---CHHHHHHHHHHCS--SSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCHH
T ss_pred EEEecC--CC-Cc-C---CHHHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCHH
Confidence 998877 23 22 2 4778888888762 58999999999999999988 69999999999987543
No 133
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=98.33 E-value=4.6e-06 Score=78.48 Aligned_cols=120 Identities=15% Similarity=0.163 Sum_probs=82.3
Q ss_pred HHHHhcCCcEEEEccCC---------C-------------------cHHHHHHHHhC---CCEEEEecC----------C
Q 020013 81 KAILSEKVAVLQVSWGE---------Y-------------------SEELVLEAHSA---GVKVVPQVG----------S 119 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~---------~-------------------~~~~i~~~~~~---g~~v~~~v~----------s 119 (332)
+.+.++|.|.|.+|.+. + ..++++.+++. +.+|...++ +
T Consensus 165 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~ 244 (363)
T 3l5l_A 165 RRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQT 244 (363)
T ss_dssp HHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHH
T ss_pred HHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCC
Confidence 34567899999998532 1 12455566653 345655432 2
Q ss_pred HHH----HHHHHHcCCCEEEEecCCCCccc---CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cce
Q 020013 120 FDE----ARKAVNAGVDAIIVQGREAGGHV---IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQG 191 (332)
Q Consensus 120 ~~~----a~~a~~~g~D~ivv~G~eaGGh~---~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~g 191 (332)
.++ ++.+.+.|+|+|-+.+....... .++...+.++..+++.+ ++||++.|||.+++++.+++..| ||.
T Consensus 245 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~---~iPVi~~GgI~s~e~a~~~l~~G~aD~ 321 (363)
T 3l5l_A 245 LEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA---KLPVTSAWGFGTPQLAEAALQANQLDL 321 (363)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH---TCCEEECSSTTSHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc---CCcEEEeCCCCCHHHHHHHHHCCCccE
Confidence 233 45667889999998652111110 01212356778888887 79999999999999999999999 999
Q ss_pred eeeccccccCcc
Q 020013 192 ICLGTRFVASEE 203 (332)
Q Consensus 192 V~~GT~fl~t~E 203 (332)
|.+|+.|+..++
T Consensus 322 V~iGR~~lanPd 333 (363)
T 3l5l_A 322 VSVGRAHLADPH 333 (363)
T ss_dssp EECCHHHHHCTT
T ss_pred EEecHHHHhCch
Confidence 999999998644
No 134
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=98.31 E-value=2.2e-06 Score=74.33 Aligned_cols=132 Identities=15% Similarity=0.076 Sum_probs=88.7
Q ss_pred HHHHHhh--cCCcEEEEee--cCCCCHHHHHHHHhcCCcEEEEccCCCcHHHHHHHHhC-CCEEEEecCCHH--------
Q 020013 55 IRKTRSL--TERPFGVGVV--LAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSA-GVKVVPQVGSFD-------- 121 (332)
Q Consensus 55 i~~~r~~--~~~p~gvnl~--~~~~~~~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~-g~~v~~~v~s~~-------- 121 (332)
++.+|+. +..++-+.++ .+.+ ..+++.+.+.|+|+|.+|... ..+.++.+++. |+.+.+..+...
T Consensus 43 i~~lr~~~~~~v~~D~kl~DI~~t~-~~~v~~~~~~Gad~vtvh~~~-g~~~i~~~~~~~gv~vl~~t~~~~~~~~~~~~ 120 (208)
T 2czd_A 43 IRRLKEETGVEIIADLKLADIPNTN-RLIARKVFGAGADYVIVHTFV-GRDSVMAVKELGEIIMVVEMSHPGALEFINPL 120 (208)
T ss_dssp HHHHHHHHCCEEEEEEEECSCHHHH-HHHHHHHHHTTCSEEEEESTT-CHHHHHHHHTTSEEEEECCCCSGGGGTTTGGG
T ss_pred HHHHHHcCCCEEEEEeeeCchHHHH-HHHHHHHHhcCCCEEEEeccC-CHHHHHHHHHhCCcEEEEecCCcchhhHHHHH
Confidence 3445554 3445566666 4443 566788889999999999533 45668888877 555555533211
Q ss_pred ---HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHH--HHHHHHHcCcceeeecc
Q 020013 122 ---EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDAR--GYVAALSLGAQGICLGT 196 (332)
Q Consensus 122 ---~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~--~v~~al~~GA~gV~~GT 196 (332)
-++.+.+.|+|++++.. +. ..-++++++..+ ..+++++|||. .+ ++.+++++||+.+++|+
T Consensus 121 v~~~~~~a~~~G~~G~~~~~-----~~------~~~i~~lr~~~~--~~~~iv~gGI~-~~g~~~~~~~~aGad~vvvGr 186 (208)
T 2czd_A 121 TDRFIEVANEIEPFGVIAPG-----TR------PERIGYIRDRLK--EGIKILAPGIG-AQGGKAKDAVKAGADYIIVGR 186 (208)
T ss_dssp HHHHHHHHHHHCCSEEECCC-----SS------THHHHHHHHHSC--TTCEEEECCCC-SSTTHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHHhCCcEEEECC-----CC------hHHHHHHHHhCC--CCeEEEECCCC-CCCCCHHHHHHcCCCEEEECh
Confidence 14456788999987732 11 233456666552 23577999995 45 89999999999999999
Q ss_pred ccccCc
Q 020013 197 RFVASE 202 (332)
Q Consensus 197 ~fl~t~ 202 (332)
.++.++
T Consensus 187 ~I~~a~ 192 (208)
T 2czd_A 187 AIYNAP 192 (208)
T ss_dssp HHHTSS
T ss_pred HHhcCC
Confidence 988763
No 135
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.31 E-value=4.6e-06 Score=74.88 Aligned_cols=164 Identities=14% Similarity=0.086 Sum_probs=96.8
Q ss_pred CcH-HHHHHHHhCCCceeec--CCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccC--C
Q 020013 23 SGP-ELVAAVANAGGLGLLR--APDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG--E 97 (332)
Q Consensus 23 s~~-~la~avs~aGglG~i~--~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g--~ 97 (332)
.+| ++|.+..+.|.-++.. ... .+.+. ++++.+....|+-++=-+. .. .++.++ .|++-|.++.. .
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvDL~~-~n~~~----i~~i~~~~~~pv~vgGGir--~~-~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIKLGP-NNDDA----AREALQESPQFLQVGGGIN--DT-NCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEEESS-SCHHH----HHHHHHHSTTTSEEESSCC--TT-THHHHT-TTCSCEEECGGGBC
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCC-CCHHH----HHHHHhcCCceEEEeCCCC--HH-HHHHHh-cCCCEEEECcHHHh
Confidence 355 5666666666433222 111 23333 4455444556665532222 23 566667 89998877521 1
Q ss_pred C----cHHHHHHH-HhCC---CEEEEec---------------------CCH-HHHHHHHHcCCCEEEEecCCCCcccCC
Q 020013 98 Y----SEELVLEA-HSAG---VKVVPQV---------------------GSF-DEARKAVNAGVDAIIVQGREAGGHVIG 147 (332)
Q Consensus 98 ~----~~~~i~~~-~~~g---~~v~~~v---------------------~s~-~~a~~a~~~g~D~ivv~G~eaGGh~~~ 147 (332)
. ++++++.+ +..+ +.+...+ .-. +-++.+.+. ++.|++.+...-|...|
T Consensus 109 ~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~dG~~~G 187 (260)
T 2agk_A 109 KEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAADVEGLCGG 187 (260)
T ss_dssp TTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC-------CC
T ss_pred hcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEeeccccCcCC
Confidence 1 14444443 2222 1111111 114 667788888 99999988765443223
Q ss_pred CCchhhhHHHHHHHhC-CCCCcEEeecCcCCHHHHHHHHHc--Ccceeeecccc
Q 020013 148 QDGLISLLPMVVDLIG-DRDIPIIAAGGIVDARGYVAALSL--GAQGICLGTRF 198 (332)
Q Consensus 148 ~~~~~~ll~~i~~~~~-~~~iPviaaGGI~~~~~v~~al~~--GA~gV~~GT~f 198 (332)
..+.++.++.+.++ ..++|||++|||++.+++.+++.+ |+++|++|++|
T Consensus 188 --~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 188 --IDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp --CCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred --CCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 35889999988761 004899999999999999999998 99999999998
No 136
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=98.28 E-value=1.8e-05 Score=69.30 Aligned_cols=123 Identities=15% Similarity=0.183 Sum_probs=87.5
Q ss_pred HHHHHhcCCcEEEEccCC--C----cHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCccc----CCCC
Q 020013 80 IKAILSEKVAVLQVSWGE--Y----SEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHV----IGQD 149 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~--~----~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~----~~~~ 149 (332)
+..+.+.|+++|.+.... . ..+.++..++.|+.++..|++.++...+...+++.|-+++..+-|.. ....
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~ 160 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNNPAVSAAVAALNPDYVAVEPPELIGTGIPVSKAKP 160 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEECCTTTTTTSCCTTTSCT
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCEEEEeChhhhccCCCCCCCCh
Confidence 677889999999886332 1 22345566778999999999998888888888998888887765532 1111
Q ss_pred chhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 150 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 150 ~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
....-..+..+... .+++++..|||.+..++..+...|+||+.+|+++|.+++
T Consensus 161 d~~~~~~~~ir~~~-~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~ 213 (225)
T 1hg3_A 161 EVITNTVELVKKVN-PEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAKD 213 (225)
T ss_dssp HHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCSS
T ss_pred hHHHHHHHHHHhcc-CCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcC
Confidence 11122222222222 268999999998888888888899999999999997643
No 137
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.27 E-value=9.6e-06 Score=72.90 Aligned_cols=113 Identities=19% Similarity=0.312 Sum_probs=77.7
Q ss_pred HHHHHHhcCCcEEEEcc--CCCcH--------HHHHHHHhCCCEEEEecC----------CHHH----HHHHHHcCCCEE
Q 020013 79 NIKAILSEKVAVLQVSW--GEYSE--------ELVLEAHSAGVKVVPQVG----------SFDE----ARKAVNAGVDAI 134 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~--g~~~~--------~~i~~~~~~g~~v~~~v~----------s~~~----a~~a~~~g~D~i 134 (332)
.++.+++.|++.|++.. |.... ++.+.+++.+++++..+. +.++ ++.+.+.|+|+|
T Consensus 97 ~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~v 176 (263)
T 1w8s_A 97 SVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAM 176 (263)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEE
Confidence 46778899999998864 54322 122334456888776542 3333 345678999999
Q ss_pred EEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcC--CHHHHHHHH----HcCcceeeeccccccCcc
Q 020013 135 IVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIV--DARGYVAAL----SLGAQGICLGTRFVASEE 203 (332)
Q Consensus 135 vv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~--~~~~v~~al----~~GA~gV~~GT~fl~t~E 203 (332)
.+. + . .....++.+++... .+||+++|||. +.+++.+.+ .+||+|+.+|+.++..+.
T Consensus 177 kt~-~-----~----~~~e~~~~~~~~~~--~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~d 239 (263)
T 1w8s_A 177 KIK-Y-----T----GDPKTFSWAVKVAG--KVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRD 239 (263)
T ss_dssp EEE-C-----C----SSHHHHHHHHHHTT--TSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTT
T ss_pred EEc-C-----C----CCHHHHHHHHHhCC--CCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcC
Confidence 884 2 1 13566777777662 34999999998 666655444 899999999999987753
No 138
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=98.25 E-value=2.1e-05 Score=69.06 Aligned_cols=172 Identities=13% Similarity=0.119 Sum_probs=108.2
Q ss_pred CccceecCCCCCCCCcHHHHHHHHhCCCceeecCC-CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcC
Q 020013 9 FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAP-DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEK 87 (332)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~-~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~ 87 (332)
.+|=...+|=- ..+.+.+.+++++|.=.++-.+ ...+.+.+.+.++++|+ ++.|+.+ +...+ +.+ ..+
T Consensus 12 w~h~~~~DPdk--~~~~~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~-~~~Piil--~p~~~--~~~----~~g 80 (235)
T 3w01_A 12 WRHIFKLDPAK--HISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR-YPLPLVL--EISNI--ESV----MPG 80 (235)
T ss_dssp CCEEEEECTTS--CCCHHHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT-SCSCEEE--ECCCS--TTC----CTT
T ss_pred ceEEEeECCCC--cCCHHHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC-cCCCEEE--ecCCH--HHh----hcC
Confidence 35656667742 3456666677777743333222 22578899999999998 7888765 33222 111 348
Q ss_pred CcEEEEc---cCCCcH----HHHHHHHhCCC-----EEEEe----cC---------------CHHHHHHHH-----HcCC
Q 020013 88 VAVLQVS---WGEYSE----ELVLEAHSAGV-----KVVPQ----VG---------------SFDEARKAV-----NAGV 131 (332)
Q Consensus 88 ~~~I~~~---~g~~~~----~~i~~~~~~g~-----~v~~~----v~---------------s~~~a~~a~-----~~g~ 131 (332)
+|.+.+. .+..+. ...+.+++.|. .++.. +. +++++.... -.|-
T Consensus 81 aD~il~pslln~~~~~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~ 160 (235)
T 3w01_A 81 FDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRL 160 (235)
T ss_dssp CSEEEEEEETTBSSGGGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEccccCCCCcchhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCC
Confidence 8888764 122222 12455677776 55542 21 233322211 1377
Q ss_pred CEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 132 DAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 132 D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
.+|-++. .|- . + ...++.++++... ++|++..|||++++++.++.. |||+|++||+|...
T Consensus 161 ~~vY~e~--sG~-~-g---~~~~v~~ir~~~~--~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~ 220 (235)
T 3w01_A 161 PVMYIEY--SGI-Y-G---DVSKVQAVSEHLT--ETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKD 220 (235)
T ss_dssp SEEEEEC--TTS-C-C---CHHHHHHHHTTCS--SSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHC
T ss_pred CEEEEec--CCC-c-C---CHHHHHHHHHhcC--CCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecC
Confidence 7887765 232 2 2 3677888877542 689999999999999998887 99999999999974
No 139
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=98.23 E-value=1.6e-05 Score=69.62 Aligned_cols=122 Identities=22% Similarity=0.219 Sum_probs=87.6
Q ss_pred HHHHHhcCCcEEEEccCC--C----cHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCC--Cch
Q 020013 80 IKAILSEKVAVLQVSWGE--Y----SEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQ--DGL 151 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~--~----~~~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~--~~~ 151 (332)
+..+.+.|+++|.+.... . ..+.++.+++.|+.++..|++..+...+...+++.|-+++..+-|.. .+ ..+
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~~~~iIayep~waiGtG-~~v~t~~ 156 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPDPRTSLAAAALGPHAVAVEPPELIGTG-RAVSRYK 156 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTCCSEEEECCGGGTTTS-CCHHHHC
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCEEEEcChhhhccC-CCCCCCC
Confidence 677888999999886433 1 22445566788999999999998888888889998888877665532 11 111
Q ss_pred hhhHH---HHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCcc
Q 020013 152 ISLLP---MVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 152 ~~ll~---~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
...+. ++.+... .+++++..|||.+..++..+...|+||+.+|+++|.+++
T Consensus 157 ~d~~~~~~~~ir~~~-~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~ 210 (226)
T 1w0m_A 157 PEAIVETVGLVSRHF-PEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKD 210 (226)
T ss_dssp HHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSS
T ss_pred hhHHHHHHHHHHhcc-CCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcC
Confidence 11122 2222222 268999999998888888888899999999999997743
No 140
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.21 E-value=4.7e-05 Score=78.06 Aligned_cols=120 Identities=14% Similarity=0.096 Sum_probs=78.1
Q ss_pred HHHHhcCCcEEEEccCC---------C-------------------cHHHHHHHHhC---CCEEEEecC----------C
Q 020013 81 KAILSEKVAVLQVSWGE---------Y-------------------SEELVLEAHSA---GVKVVPQVG----------S 119 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~---------~-------------------~~~~i~~~~~~---g~~v~~~v~----------s 119 (332)
+.+.++|.|.|.+|.++ + +.++++.+++. +.+|+..++ +
T Consensus 156 ~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~ 235 (729)
T 1o94_A 156 KRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIE 235 (729)
T ss_dssp HHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCC
T ss_pred HHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCC
Confidence 34567899999998544 1 22455666552 566664432 1
Q ss_pred -HHH---HHHHHHcCCCEEEEecCC---CCcccCCC-----CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHc
Q 020013 120 -FDE---ARKAVNAGVDAIIVQGRE---AGGHVIGQ-----DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 187 (332)
Q Consensus 120 -~~~---a~~a~~~g~D~ivv~G~e---aGGh~~~~-----~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~ 187 (332)
.++ ..+.++.++|++-+.+.. ..+..... ...+.++.++++.+ ++|||+.|||.+++++.++++.
T Consensus 236 ~~~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pvi~~G~i~~~~~a~~~l~~ 312 (729)
T 1o94_A 236 AEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVS---KKPVLGVGRYTDPEKMIEIVTK 312 (729)
T ss_dssp TTTHHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTC---SSCEECCSCCCCHHHHHHHHHT
T ss_pred chHHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHC---CCEEEEeCCCCCHHHHHHHHHC
Confidence 222 223344479998775421 11111011 11255667777766 7999999999999999999999
Q ss_pred C-cceeeeccccccCcc
Q 020013 188 G-AQGICLGTRFVASEE 203 (332)
Q Consensus 188 G-A~gV~~GT~fl~t~E 203 (332)
| ||+|.+|+.|+..++
T Consensus 313 g~aD~V~~gR~~l~~P~ 329 (729)
T 1o94_A 313 GYADIIGCARPSIADPF 329 (729)
T ss_dssp TSCSBEEESHHHHHCTT
T ss_pred CCCCEEEeCchhhcCch
Confidence 8 999999999998754
No 141
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=98.20 E-value=2.9e-05 Score=74.34 Aligned_cols=79 Identities=18% Similarity=0.262 Sum_probs=58.0
Q ss_pred HHHHHH-cCCCEEEEecCCCCc--cc---CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecc
Q 020013 123 ARKAVN-AGVDAIIVQGREAGG--HV---IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 196 (332)
Q Consensus 123 a~~a~~-~g~D~ivv~G~eaGG--h~---~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT 196 (332)
++.+.+ .|+|+|-+.+..... .. .+....+.++..+++.++. ++|||+.|||.+++++.++++. ||.|.+|+
T Consensus 270 a~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~-~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR 347 (419)
T 3l5a_A 270 IDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAG-RIPLIASGGINSPESALDALQH-ADMVGMSS 347 (419)
T ss_dssp HHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTT-SSCEEECSSCCSHHHHHHHGGG-CSEEEEST
T ss_pred HHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCC-CCeEEEECCCCCHHHHHHHHHh-CCcHHHHH
Confidence 455677 899999997643200 10 0111234567777777632 5999999999999999999999 99999999
Q ss_pred ccccCcc
Q 020013 197 RFVASEE 203 (332)
Q Consensus 197 ~fl~t~E 203 (332)
.|+..++
T Consensus 348 ~~IanPd 354 (419)
T 3l5a_A 348 PFVTEPD 354 (419)
T ss_dssp HHHHCTT
T ss_pred HHHHCcH
Confidence 9997654
No 142
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=98.19 E-value=1.5e-05 Score=74.84 Aligned_cols=110 Identities=16% Similarity=0.160 Sum_probs=79.1
Q ss_pred HHHHhcCCcEEEEccCC---------C-------------------cHHHHHHHHhC-CC-EEEEecCC-----------
Q 020013 81 KAILSEKVAVLQVSWGE---------Y-------------------SEELVLEAHSA-GV-KVVPQVGS----------- 119 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~---------~-------------------~~~~i~~~~~~-g~-~v~~~v~s----------- 119 (332)
+.+.++|.|.|.+|.++ + ..++++.+++. |. +|...++.
T Consensus 168 ~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~ 247 (361)
T 3gka_A 168 ENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSD 247 (361)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSC
T ss_pred HHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCC
Confidence 34567899999998653 1 12455666543 22 55544331
Q ss_pred -HH----HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceee
Q 020013 120 -FD----EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGIC 193 (332)
Q Consensus 120 -~~----~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~ 193 (332)
.+ -++.+.+.|+|+|-+.+... +. .++.++++.+ ++|||+.||| +++++.++++.| ||.|.
T Consensus 248 ~~~~~~~la~~l~~~Gvd~i~v~~~~~-----~~----~~~~~ik~~~---~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~ 314 (361)
T 3gka_A 248 PAATFGHVARELGRRRIAFLFARESFG-----GD----AIGQQLKAAF---GGPFIVNENF-TLDSAQAALDAGQADAVA 314 (361)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCS-----TT----CCHHHHHHHH---CSCEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEECCCCC-----CH----HHHHHHHHHc---CCCEEEeCCC-CHHHHHHHHHcCCccEEE
Confidence 22 34556788999999865421 11 4567888887 7999999999 999999999998 99999
Q ss_pred eccccccCcc
Q 020013 194 LGTRFVASEE 203 (332)
Q Consensus 194 ~GT~fl~t~E 203 (332)
+|+.|+..++
T Consensus 315 iGR~~ladPd 324 (361)
T 3gka_A 315 WGKLFIANPD 324 (361)
T ss_dssp ESHHHHHCTT
T ss_pred ECHHhHhCcH
Confidence 9999998764
No 143
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=98.16 E-value=1.3e-05 Score=70.17 Aligned_cols=144 Identities=14% Similarity=0.092 Sum_probs=88.0
Q ss_pred HHHHHhhc-CCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcH---HHHHHHHhCC---CEEEEecC---CHHHHH
Q 020013 55 IRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSE---ELVLEAHSAG---VKVVPQVG---SFDEAR 124 (332)
Q Consensus 55 i~~~r~~~-~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~---~~i~~~~~~g---~~v~~~v~---s~~~a~ 124 (332)
++++++.. +.++-..+-+.+..+...+.+.+.|+|.+.+|...... ..++.+++.| ..+...+. +.+.+.
T Consensus 49 v~~l~~~~p~~~iflDlKl~Dip~t~~~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~ 128 (221)
T 3exr_A 49 VEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQ 128 (221)
T ss_dssp HHHHHHHCTTSEEEEEEEECSCHHHHHHHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHH
T ss_pred HHHHHHhCCCCcEEEEEEeeccHHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHH
Confidence 55555542 33333333332222455666788999999998533222 3344455555 55555443 577777
Q ss_pred HHHHcCCCEEEEe-cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCc
Q 020013 125 KAVNAGVDAIIVQ-GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 125 ~a~~~g~D~ivv~-G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
...+.++|.+++. +..++ . .|......-++.+++... .+.++.+.||| +++++..+..+|||.+++||.+..++
T Consensus 129 ~~~~~~~~~~v~~~a~~~~-~-~Gvv~s~~e~~~ir~~~~-~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~~I~~a~ 203 (221)
T 3exr_A 129 QWLDAGISQAIYHQSRDAL-L-AGETWGEKDLNKVKKLIE-MGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGRGITEAK 203 (221)
T ss_dssp HHHHTTCCEEEEECCHHHH-H-HTCCCCHHHHHHHHHHHH-HTCEEEEESSC-CGGGGGGGTTCCCSEEEECHHHHTSS
T ss_pred HHHcCCHHHHHHHHHHhcC-C-CccccCHHHHHHHHHhhc-CCceEEEECCC-CHHHHHHHHHCCCCEEEECchhhCCC
Confidence 7788899988873 22111 1 122222233444544432 15789999999 88999999999999999999877653
No 144
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=98.15 E-value=1.7e-05 Score=74.53 Aligned_cols=110 Identities=21% Similarity=0.285 Sum_probs=78.8
Q ss_pred HHHHhcCCcEEEEccCC---------C-------------------cHHHHHHHHhC-CC-EEEEecCC-----------
Q 020013 81 KAILSEKVAVLQVSWGE---------Y-------------------SEELVLEAHSA-GV-KVVPQVGS----------- 119 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~---------~-------------------~~~~i~~~~~~-g~-~v~~~v~s----------- 119 (332)
+.+.++|.|.|.+|.++ + ..++++.+++. |. +|...++.
T Consensus 160 ~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~ 239 (362)
T 4ab4_A 160 ENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDAD 239 (362)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTT
T ss_pred HHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCC
Confidence 34567899999998653 1 12455555542 21 55544331
Q ss_pred -HHH----HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceee
Q 020013 120 -FDE----ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGIC 193 (332)
Q Consensus 120 -~~~----a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~ 193 (332)
.++ ++.+.+.|+|+|-+.+.. . +. .++.++++.+ ++|||+.||| +++++.++++.| ||.|.
T Consensus 240 ~~~~~~~la~~l~~~Gvd~i~v~~~~----~-~~----~~~~~ik~~~---~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~ 306 (362)
T 4ab4_A 240 RAETFTYVARELGKRGIAFICSRERE----A-DD----SIGPLIKEAF---GGPYIVNERF-DKASANAALASGKADAVA 306 (362)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC----C-TT----CCHHHHHHHH---CSCEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred cHHHHHHHHHHHHHhCCCEEEECCCC----C-CH----HHHHHHHHHC---CCCEEEeCCC-CHHHHHHHHHcCCccEEE
Confidence 222 455678899999986542 1 11 4567888887 7999999999 999999999998 99999
Q ss_pred eccccccCcc
Q 020013 194 LGTRFVASEE 203 (332)
Q Consensus 194 ~GT~fl~t~E 203 (332)
+|+.|+..++
T Consensus 307 iGR~~lanPd 316 (362)
T 4ab4_A 307 FGVPFIANPD 316 (362)
T ss_dssp ESHHHHHCTT
T ss_pred ECHHhHhCcH
Confidence 9999998764
No 145
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=98.12 E-value=3e-05 Score=72.31 Aligned_cols=119 Identities=17% Similarity=0.102 Sum_probs=81.2
Q ss_pred HHHHhcCCcEEEEc---------cCCC-------------------cHHHHHHHHhC---CCEEEEecC---------CH
Q 020013 81 KAILSEKVAVLQVS---------WGEY-------------------SEELVLEAHSA---GVKVVPQVG---------SF 120 (332)
Q Consensus 81 ~~~~~~~~~~I~~~---------~g~~-------------------~~~~i~~~~~~---g~~v~~~v~---------s~ 120 (332)
+.+.++|.|.|.+| |.++ ..++++.+++. +.+|...++ +.
T Consensus 150 ~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~ 229 (343)
T 3kru_A 150 KRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINI 229 (343)
T ss_dssp HHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCH
T ss_pred hhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccH
Confidence 34567899999998 2221 12556666664 456665443 23
Q ss_pred HH----HHHHHHcCCCEEEEe-cCCCCccc-CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceee
Q 020013 121 DE----ARKAVNAGVDAIIVQ-GREAGGHV-IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGIC 193 (332)
Q Consensus 121 ~~----a~~a~~~g~D~ivv~-G~eaGGh~-~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~ 193 (332)
++ ++.+.+. +|+|-+. |....... ..+...+.++.++++.+ ++||++.|||.+++++.++++.| ||.|.
T Consensus 230 ~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~---~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~ 305 (343)
T 3kru_A 230 DMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC---NIKTSAVGLITTQELAEEILSNERADLVA 305 (343)
T ss_dssp HHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH---TCEEEEESSCCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc---CcccceeeeeeHHHHHHHHHhchhhHHHH
Confidence 44 4445667 9999984 32111000 01112466778888888 79999999999999999999998 99999
Q ss_pred eccccccCcc
Q 020013 194 LGTRFVASEE 203 (332)
Q Consensus 194 ~GT~fl~t~E 203 (332)
+|+.|+..++
T Consensus 306 iGR~~lanPd 315 (343)
T 3kru_A 306 LGRELLRNPY 315 (343)
T ss_dssp ESHHHHHCTT
T ss_pred HHHHHhcCCe
Confidence 9999998754
No 146
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.10 E-value=3.7e-06 Score=74.77 Aligned_cols=78 Identities=21% Similarity=0.288 Sum_probs=62.0
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 120 FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
.+.++.+.+.|+|.|.+....+.+. +....+.++.++++.+ ++||++.|||.+.+++.+++.+|||+|.+|+.++
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~~~--~~~~~~~~i~~i~~~~---~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l 108 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISATHE--ERAILLDVVARVAERV---FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAV 108 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSSTT--CHHHHHHHHHHHHTTC---CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCCcccc--CccccHHHHHHHHHhC---CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHH
Confidence 3556777889999998876654433 1223466777777765 7999999999999999999999999999999999
Q ss_pred cCc
Q 020013 200 ASE 202 (332)
Q Consensus 200 ~t~ 202 (332)
..+
T Consensus 109 ~~p 111 (252)
T 1ka9_F 109 RRP 111 (252)
T ss_dssp HCT
T ss_pred hCc
Confidence 654
No 147
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=98.08 E-value=1.6e-05 Score=72.03 Aligned_cols=87 Identities=26% Similarity=0.349 Sum_probs=66.4
Q ss_pred HHHHHHHhC---CCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCC
Q 020013 101 ELVLEAHSA---GVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD 177 (332)
Q Consensus 101 ~~i~~~~~~---g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~ 177 (332)
.-++.+++. ..++...|.|.++++++.+.|+|+|.+.+. . ...++++++.++. ++|+.++||| +
T Consensus 184 ~av~~ar~~~~~~~~IgVev~t~eea~eA~~aGaD~I~ld~~-------~----~~~~k~av~~v~~-~ipi~AsGGI-t 250 (286)
T 1x1o_A 184 EAVRRAKARAPHYLKVEVEVRSLEELEEALEAGADLILLDNF-------P----LEALREAVRRVGG-RVPLEASGNM-T 250 (286)
T ss_dssp HHHHHHHHHSCTTSCEEEEESSHHHHHHHHHHTCSEEEEESC-------C----HHHHHHHHHHHTT-SSCEEEESSC-C
T ss_pred HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHcCCCEEEECCC-------C----HHHHHHHHHHhCC-CCeEEEEcCC-C
Confidence 344555543 367888999999999999999999998543 1 1234455555532 6999999999 8
Q ss_pred HHHHHHHHHcCcceeeecccccc
Q 020013 178 ARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 178 ~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
.+++.++.+.|+|++.+|+....
T Consensus 251 ~eni~~~a~tGvD~IsVgs~~~~ 273 (286)
T 1x1o_A 251 LERAKAAAEAGVDYVSVGALTHS 273 (286)
T ss_dssp HHHHHHHHHHTCSEEECTHHHHS
T ss_pred HHHHHHHHHcCCCEEEEcHHHcC
Confidence 99999999999999999886543
No 148
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.07 E-value=5.5e-05 Score=68.87 Aligned_cols=109 Identities=19% Similarity=0.223 Sum_probs=76.4
Q ss_pred HHHHHHhcCCcEEEEc--cCCCcH--------HHHHHHHhCCCEEEEec-------CCHH----HHHHHHHcCCCEEEEe
Q 020013 79 NIKAILSEKVAVLQVS--WGEYSE--------ELVLEAHSAGVKVVPQV-------GSFD----EARKAVNAGVDAIIVQ 137 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~--~g~~~~--------~~i~~~~~~g~~v~~~v-------~s~~----~a~~a~~~g~D~ivv~ 137 (332)
.++.+++.|++.|.++ .|.... ++++.+++.|++++... .+.+ .++.+.+.|+|+|.+.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~ 209 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY 209 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 4678889999998875 444222 23445566789887632 2322 4566789999999884
Q ss_pred cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCH-----HHHHHHHHcCcceeeeccccccCc
Q 020013 138 GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDA-----RGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 138 G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~-----~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
-+ + ..+.++++.. .+||+++||+... +.+.+++.+||+|+.+|+.++..+
T Consensus 210 ~t---~---------e~~~~vv~~~---~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~ 264 (295)
T 3glc_A 210 YV---E---------KGFERIVAGC---PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSD 264 (295)
T ss_dssp CC---T---------TTHHHHHHTC---SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSS
T ss_pred CC---H---------HHHHHHHHhC---CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCc
Confidence 11 1 2346666655 6999999999743 357788899999999999988774
No 149
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=97.98 E-value=0.00016 Score=63.46 Aligned_cols=107 Identities=18% Similarity=0.227 Sum_probs=67.7
Q ss_pred HHHHHHhcCCcEEEEcc-------CCCcHHHH---HHHHh-C-C--CEEEEecC--CHHHHHHH----HHcCCCEEEEe-
Q 020013 79 NIKAILSEKVAVLQVSW-------GEYSEELV---LEAHS-A-G--VKVVPQVG--SFDEARKA----VNAGVDAIIVQ- 137 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~-------g~~~~~~i---~~~~~-~-g--~~v~~~v~--s~~~a~~a----~~~g~D~ivv~- 137 (332)
..+.+++.|+|-|.+.. |+ ...+. +.+++ . + +|++.... +.++..++ .++|+|+|...
T Consensus 100 Ea~~Ai~~GAdEIDmViNig~lk~g~-~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTST 178 (239)
T 3ngj_A 100 ETKVAVEQGAEEVDMVINIGMVKAKK-YDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTST 178 (239)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTC-HHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHcCCCEEEEEeehHHhcccc-HHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCC
Confidence 35567788999988753 22 12222 22222 1 2 45654332 55555544 78999999874
Q ss_pred cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceee
Q 020013 138 GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIC 193 (332)
Q Consensus 138 G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~ 193 (332)
|+..||-+ .....++++. +. .+++|-++|||.+.+++.+++.+||+.+-
T Consensus 179 Gf~~ggAt---~~dv~lmr~~---vg-~~v~VKasGGIrt~~da~~~i~aGA~riG 227 (239)
T 3ngj_A 179 GFGTHGAT---PEDVKLMKDT---VG-DKALVKAAGGIRTFDDAMKMINNGASRIG 227 (239)
T ss_dssp SSSSCCCC---HHHHHHHHHH---HG-GGSEEEEESSCCSHHHHHHHHHTTEEEEE
T ss_pred CCCCCCCC---HHHHHHHHHh---hC-CCceEEEeCCCCCHHHHHHHHHhccccee
Confidence 66544432 2334444443 32 26999999999999999999999999543
No 150
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=97.97 E-value=6.8e-05 Score=71.40 Aligned_cols=78 Identities=13% Similarity=0.123 Sum_probs=57.6
Q ss_pred HHHHHHHcC------CCEEEEecCCCCcccCCCC-------chhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC
Q 020013 122 EARKAVNAG------VDAIIVQGREAGGHVIGQD-------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 188 (332)
Q Consensus 122 ~a~~a~~~g------~D~ivv~G~eaGGh~~~~~-------~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G 188 (332)
-++.+.+.| +|+|-+.+...-.+...+. ..+.++..+++.+ ++|||+.||| +++++.++|+.|
T Consensus 265 la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~---~iPvi~~G~i-~~~~a~~~l~~g 340 (402)
T 2hsa_B 265 VVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAY---QGTFICSGGY-TRELGIEAVAQG 340 (402)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHC---SSCEEEESSC-CHHHHHHHHHTT
T ss_pred HHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHC---CCCEEEeCCC-CHHHHHHHHHCC
Confidence 345667789 9999997532111100110 1355677777777 7999999999 999999999988
Q ss_pred -cceeeeccccccCcc
Q 020013 189 -AQGICLGTRFVASEE 203 (332)
Q Consensus 189 -A~gV~~GT~fl~t~E 203 (332)
||+|.+|+.|+..++
T Consensus 341 ~aD~V~igR~~l~dP~ 356 (402)
T 2hsa_B 341 DADLVSYGRLFISNPD 356 (402)
T ss_dssp SCSEEEESHHHHHCTT
T ss_pred CCceeeecHHHHhCch
Confidence 999999999998754
No 151
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.95 E-value=2e-05 Score=70.55 Aligned_cols=92 Identities=22% Similarity=0.243 Sum_probs=65.1
Q ss_pred CHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccc
Q 020013 119 SFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 119 s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~f 198 (332)
..+.++.+.+.|+|.|.+....+.|.. ....+.++.++++.. ++||++.|||.+.+++.+++.+|||+|.+|+.+
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~~--~g~~~~~i~~i~~~~---~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~ 106 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGTK--SGYDTEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLAGADKALAASVF 106 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSCS--SCCCHHHHHHHGGGC---CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccCC--CcccHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHH
Confidence 356677788899999999765543322 113467788887765 799999999999999999999999999999998
Q ss_pred ccCccCCCCHHHHHHHhcC
Q 020013 199 VASEESYAHPEYKRKLVEM 217 (332)
Q Consensus 199 l~t~Es~~~~~~k~~~~~~ 217 (332)
+-... -++.+++.+...
T Consensus 107 ~~~~~--~~~~~~~~~~~~ 123 (266)
T 2w6r_A 107 HFREI--DMRELKEYLKKH 123 (266)
T ss_dssp --------CHHHHHHCC--
T ss_pred HhCCC--CHHHHHHHHHHc
Confidence 82110 134566654443
No 152
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.94 E-value=0.00014 Score=65.57 Aligned_cols=109 Identities=21% Similarity=0.242 Sum_probs=70.2
Q ss_pred HHHHHHhcCCcEEEEcc-------CCCcHH---HHHHHHh-C---CCEEEEec--CCHHH----HHHHHHcCCCEEEEe-
Q 020013 79 NIKAILSEKVAVLQVSW-------GEYSEE---LVLEAHS-A---GVKVVPQV--GSFDE----ARKAVNAGVDAIIVQ- 137 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~-------g~~~~~---~i~~~~~-~---g~~v~~~v--~s~~~----a~~a~~~g~D~ivv~- 137 (332)
..+.+++.|+|-|.+.. |+ ... .++.+++ . .++++... -+.++ ++.+.++|+|+|...
T Consensus 131 Ea~~Ai~~GAdEIDmVINig~lk~g~-~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTST 209 (288)
T 3oa3_A 131 EAKRAMQNGASELDMVMNYPWLSEKR-YTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTST 209 (288)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTC-HHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCC
T ss_pred HHHHHHHcCCCEEEEEeehhhhcCCc-HHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCC
Confidence 35567888999988542 21 122 2333333 2 25666433 35555 445678999999873
Q ss_pred cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCccee
Q 020013 138 GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGI 192 (332)
Q Consensus 138 G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV 192 (332)
|+..+|- ......++.++++... .++||.++|||.+.+++.+++.+||+-+
T Consensus 210 Gf~~~GA---T~edv~lmr~~v~~~g-~~v~VKAAGGIrt~edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 210 GFNGPGA---SIENVSLMSAVCDSLQ-SETRVKASGGIRTIEDCVKMVRAGAERL 260 (288)
T ss_dssp SSSSCCC---CHHHHHHHHHHHHHSS-SCCEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCCCCCC---CHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 4433332 2344666666665322 2799999999999999999999999954
No 153
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=97.93 E-value=1.6e-05 Score=72.01 Aligned_cols=91 Identities=19% Similarity=0.182 Sum_probs=68.3
Q ss_pred HHHHHHHHhCC---CEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCC--CCCcEEeecC
Q 020013 100 EELVLEAHSAG---VKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGD--RDIPIIAAGG 174 (332)
Q Consensus 100 ~~~i~~~~~~g---~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~--~~iPviaaGG 174 (332)
..-++.+++.. .++...|.|.++++.+.++|+|+|.+.+. + ...+.++++.++. .++|+.++||
T Consensus 180 ~~av~~ar~~~~~~~~I~VEV~tleea~eA~~aGaD~I~LDn~-------~----~e~l~~av~~l~~~~~~v~ieASGG 248 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVEVENLEDALRAVEAGADIVMLDNL-------S----PEEVKDISRRIKDINPNVIVEVSGG 248 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEEESSHHHHHHHHHTTCSEEEEESC-------C----HHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred HHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCCEEEECCC-------C----HHHHHHHHHHhhccCCCceEEEECC
Confidence 44566666653 67888999999999999999999999653 1 1233333333211 1589999999
Q ss_pred cCCHHHHHHHHHcCcceeeeccccccCc
Q 020013 175 IVDARGYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 175 I~~~~~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
| +.+++.++...|+|++.+|+.....+
T Consensus 249 I-t~eni~~~a~tGVD~IsvGslt~sa~ 275 (285)
T 1o4u_A 249 I-TEENVSLYDFETVDVISSSRLTLQEV 275 (285)
T ss_dssp C-CTTTGGGGCCTTCCEEEEGGGTSSCC
T ss_pred C-CHHHHHHHHHcCCCEEEEeHHHcCCC
Confidence 9 89999999999999999999655443
No 154
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.93 E-value=6.2e-05 Score=68.98 Aligned_cols=117 Identities=23% Similarity=0.314 Sum_probs=76.3
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC--cH-------HHHHHHHhCCCEEEEecC----------C----HHH-HHHHHHcCC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY--SE-------ELVLEAHSAGVKVVPQVG----------S----FDE-ARKAVNAGV 131 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~--~~-------~~i~~~~~~g~~v~~~v~----------s----~~~-a~~a~~~g~ 131 (332)
..++.+++.|+++|.+. ++.. .. ++.+.+++.|++++..+. + +.+ ++.+.+.|+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGa 191 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGA 191 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSC
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCC
Confidence 45778899999999842 3321 11 234455678998775431 1 233 666778899
Q ss_pred CEEEEecCCCCcccCCCCchhhhHHHHHHHhC-CCCCc-EEeecCcCCH----HHHHHHHHcCcceeeeccccccC
Q 020013 132 DAIIVQGREAGGHVIGQDGLISLLPMVVDLIG-DRDIP-IIAAGGIVDA----RGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 132 D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~-~~~iP-viaaGGI~~~----~~v~~al~~GA~gV~~GT~fl~t 201 (332)
|++.+.-+..+ . + .+..+.++.+... ...+| |+++||+ +. +++..++..||+||.+|+.++..
T Consensus 192 D~iKv~~~~~~--~-g---~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 192 DLYKVEMPLYG--K-G---ARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp SEEEECCGGGG--C-S---CHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred CEEEeCCCcCC--C-C---CHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 99988442111 0 1 2333444444410 02689 9999999 66 45888999999999999998866
No 155
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.92 E-value=7.3e-06 Score=72.48 Aligned_cols=79 Identities=14% Similarity=0.109 Sum_probs=61.3
Q ss_pred CHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccc
Q 020013 119 SFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 119 s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~f 198 (332)
..+.++.+.+.|+|.|.+....+.+.. ....+.++++++ .. ++||++.|||.+.+++.+++..|||+|.+|+.+
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~--~~~~~~~i~~i~-~~---~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~ 105 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVDLSNAIEN--SGENLPVLEKLS-EF---AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKV 105 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEEHHHHHHC--CCTTHHHHHHGG-GG---GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHH
T ss_pred HHHHHHHHHHcCCCEEEEecccccccC--CchhHHHHHHHH-hc---CCcEEEECCCCCHHHHHHHHHCCCCEEEECchH
Confidence 345677788899999998765442221 123366777776 55 799999999999999999999999999999999
Q ss_pred ccCcc
Q 020013 199 VASEE 203 (332)
Q Consensus 199 l~t~E 203 (332)
+..+|
T Consensus 106 l~~p~ 110 (241)
T 1qo2_A 106 LEDPS 110 (241)
T ss_dssp HHCTT
T ss_pred hhChH
Confidence 87654
No 156
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.89 E-value=0.00031 Score=62.23 Aligned_cols=141 Identities=20% Similarity=0.260 Sum_probs=90.5
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc-CCCcHHHHHHH-HhCC--CEE-EEec----------
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW-GEYSEELVLEA-HSAG--VKV-VPQV---------- 117 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~-g~~~~~~i~~~-~~~g--~~v-~~~v---------- 117 (332)
+.++++.+....|+-++=-+. ..+.++.+++.|++-|.++- -...+++++.+ +..| ..+ ...+
T Consensus 65 ~~i~~i~~~~~~pl~vGGGIr--s~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~ 142 (243)
T 4gj1_A 65 ALIEKLAKEVSVNLQVGGGIR--SKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAV 142 (243)
T ss_dssp HHHHHHHHHCCSEEEEESSCC--CHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC-
T ss_pred HHHHHHHHhcCCCeEeccccc--cHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEe
Confidence 456666555667776653332 25778889999999888752 22234555443 3332 111 1111
Q ss_pred ------C--C-HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC
Q 020013 118 ------G--S-FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 188 (332)
Q Consensus 118 ------~--s-~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G 188 (332)
+ + .+.++...+.|+.-|++...+--|...| ..+.++..+.+... ++|||++||+++.+|+.+. ..+
T Consensus 143 ~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G--~d~~l~~~l~~~~~--~ipviasGGv~~~~Dl~~l-~~~ 217 (243)
T 4gj1_A 143 NAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQG--VNVRLYKLIHEIFP--NICIQASGGVASLKDLENL-KGI 217 (243)
T ss_dssp -------CCBHHHHHHHHHTTTCCEEEEEETTC-----C--CCHHHHHHHHHHCT--TSEEEEESCCCSHHHHHHT-TTT
T ss_pred cCceecccchHHHHHHHHhhcCCcEEEeeeecccccccC--CCHHHHHHHHHhcC--CCCEEEEcCCCCHHHHHHH-Hcc
Confidence 0 1 3456677889999999976544343222 34778888887653 6999999999999999875 667
Q ss_pred cceeeecccccc
Q 020013 189 AQGICLGTRFVA 200 (332)
Q Consensus 189 A~gV~~GT~fl~ 200 (332)
++||.+|++|..
T Consensus 218 ~~gvivg~Al~~ 229 (243)
T 4gj1_A 218 CSGVIVGKALLD 229 (243)
T ss_dssp CSEEEECHHHHT
T ss_pred CchhehHHHHHC
Confidence 999999999853
No 157
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.88 E-value=3.2e-05 Score=69.81 Aligned_cols=88 Identities=20% Similarity=0.265 Sum_probs=66.3
Q ss_pred HHHHHHHHhCC---CEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCC--CCCcEEeecC
Q 020013 100 EELVLEAHSAG---VKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGD--RDIPIIAAGG 174 (332)
Q Consensus 100 ~~~i~~~~~~g---~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~--~~iPviaaGG 174 (332)
.+-++.+++.. .++...+.+.++++.+.+.|+|+|.+... + ...+.++++.++. .++|+.++||
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~-------~----~~~l~~~v~~l~~~~~~~~i~AsGG 237 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDNL-------S----VLETKEIAAYRDAHYPFVLLEASGN 237 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEESSHHHHHHHHHHTCSEEEEETC-------C----HHHHHHHHHHHHHHCTTCEEEEESS
T ss_pred HHHHHHHHHhCCCCceEEEEcCCHHHHHHHHHcCCCEEEECCC-------C----HHHHHHHHHHhhccCCCcEEEEECC
Confidence 34556666542 57888999999999999999999998542 1 2333433333311 1589999999
Q ss_pred cCCHHHHHHHHHcCcceeeeccccc
Q 020013 175 IVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 175 I~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
| |.+++.+++..|+|++.+|+.+.
T Consensus 238 I-~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 238 I-SLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp C-CTTTHHHHHTTTCSEEECTHHHH
T ss_pred C-CHHHHHHHHHcCCcEEEEcHHhc
Confidence 9 99999999999999999999855
No 158
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.88 E-value=3.8e-05 Score=68.80 Aligned_cols=171 Identities=12% Similarity=0.059 Sum_probs=102.4
Q ss_pred eecCCCCCCCCcHH---HHHHHHhCCCceeecCCCCCC--HHHHHHHHHHHHhhcCCcEEEEee---cCCCCHHHHHHHH
Q 020013 13 IVQAPLGPDISGPE---LVAAVANAGGLGLLRAPDWEA--PDYLRDLIRKTRSLTERPFGVGVV---LAFPHNENIKAIL 84 (332)
Q Consensus 13 ii~apM~~g~s~~~---la~avs~aGglG~i~~~~~~~--~e~~~~~i~~~r~~~~~p~gvnl~---~~~~~~~~~~~~~ 84 (332)
++.+|-- ....+ ++..+++.|.=.++......+ .+.+.+.++.+|+.++.|+-..+. .+. .. +
T Consensus 43 ~liDPdK--~~~~~~~~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~---~~----i 113 (286)
T 3vk5_A 43 HIIDPFK--VPVTEAVEKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAG---FP----V 113 (286)
T ss_dssp EEECTTT--SCHHHHHHHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTB---SC----C
T ss_pred EEECCCC--CCcHHHHHHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCc---cc----c
Confidence 3456643 23333 677788887433332212256 788999999999988888776433 111 00 1
Q ss_pred hcCCcEEEEc---cCCCcHHHHHH---------H----HhCCCEEEEe-------------------cCCHHH------H
Q 020013 85 SEKVAVLQVS---WGEYSEELVLE---------A----HSAGVKVVPQ-------------------VGSFDE------A 123 (332)
Q Consensus 85 ~~~~~~I~~~---~g~~~~~~i~~---------~----~~~g~~v~~~-------------------v~s~~~------a 123 (332)
..++|++.+. -+..+..++.. + ++.| .+++. .++++. +
T Consensus 114 ~~~aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~g-e~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa 192 (286)
T 3vk5_A 114 VRGADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWP-ELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYL 192 (286)
T ss_dssp CTTCSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCC-EEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHH
T ss_pred ccCCCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhC-CcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHH
Confidence 2245555432 11222222222 1 2223 33211 112222 2
Q ss_pred HHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 124 RKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 124 ~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
+.+...|.+.|-+++. + . .....++.++++.+.. ++||++.|||++.+++.+++.+|||+|++||+++..
T Consensus 193 ~~gad~G~~lV~LD~~---~-~---~v~~e~V~~I~~~~~~-~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d 262 (286)
T 3vk5_A 193 HVARAFGFHMVYLYSR---N-E---HVPPEVVRHFRKGLGP-DQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQP 262 (286)
T ss_dssp HHHHHTTCSEEEEECS---S-S---CCCHHHHHHHHHHSCT-TCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSST
T ss_pred HHHHHcCCCEEEEcCC---C-C---cCCHHHHHHHHHhcCC-CCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcC
Confidence 3345678889988743 2 1 2346788888877521 589999999999999999999999999999999765
No 159
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.87 E-value=0.00022 Score=62.12 Aligned_cols=114 Identities=24% Similarity=0.239 Sum_probs=70.3
Q ss_pred HHHHHHhcCCcEEEEcc--CC----CcHHHHH---HHHh----CCCEEEEec--CCHHHHH----HHHHcCCCEEEEe-c
Q 020013 79 NIKAILSEKVAVLQVSW--GE----YSEELVL---EAHS----AGVKVVPQV--GSFDEAR----KAVNAGVDAIIVQ-G 138 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~--g~----~~~~~i~---~~~~----~g~~v~~~v--~s~~~a~----~a~~~g~D~ivv~-G 138 (332)
..+.+++.|+|-|.+.. |. ....+.+ .+++ ..+|++... .+.++.. .+.++|+|+|... |
T Consensus 76 e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTG 155 (220)
T 1ub3_A 76 EAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTG 155 (220)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred HHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 35677889999987753 21 1222222 2222 345655432 2555443 4568899999873 5
Q ss_pred CCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcc--eeeeccccc
Q 020013 139 REAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQ--GICLGTRFV 199 (332)
Q Consensus 139 ~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~--gV~~GT~fl 199 (332)
+..||-+ .....++.++ +. .++||.++|||.+.+++.+++.+||+ |+-.|..++
T Consensus 156 f~~~gat---~~dv~~m~~~---vg-~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~g~~I~ 211 (220)
T 1ub3_A 156 FGPRGAS---LEDVALLVRV---AQ-GRAQVKAAGGIRDRETALRMLKAGASRLGTSSGVALV 211 (220)
T ss_dssp SSSCCCC---HHHHHHHHHH---HT-TSSEEEEESSCCSHHHHHHHHHTTCSEEEETTHHHHH
T ss_pred CCCCCCC---HHHHHHHHHh---hC-CCCeEEEECCCCCHHHHHHHHHCCCcccchhHHHHHH
Confidence 5434322 2234444443 32 37999999999999999999999999 665555443
No 160
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.85 E-value=2.3e-05 Score=69.62 Aligned_cols=78 Identities=22% Similarity=0.335 Sum_probs=60.0
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 120 FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
.+.++.+.+.|+|.|.+....+.+. +....+..+.++++.. ++|+++.|||.+++++.+++.+|||+|.+|+..+
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~~--~~~~~~~~i~~i~~~~---~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l 107 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDITASVE--KRKTMLELVEKVAEQI---DIPFTVGGGIHDFETASELILRGADKVSINTAAV 107 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESSCSSS--HHHHHHHHHHHHHTTC---CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCchhhc--CCcccHHHHHHHHHhC---CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHH
Confidence 3556777889999998876543221 1123456667777655 7999999999999999999999999999999988
Q ss_pred cCc
Q 020013 200 ASE 202 (332)
Q Consensus 200 ~t~ 202 (332)
..+
T Consensus 108 ~~p 110 (253)
T 1thf_D 108 ENP 110 (253)
T ss_dssp HCT
T ss_pred hCh
Confidence 654
No 161
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=97.85 E-value=5.6e-05 Score=68.40 Aligned_cols=91 Identities=9% Similarity=0.078 Sum_probs=66.9
Q ss_pred HHHHHHHHhCCC--EEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCC
Q 020013 100 EELVLEAHSAGV--KVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD 177 (332)
Q Consensus 100 ~~~i~~~~~~g~--~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~ 177 (332)
.+-++.+++... ++...+.+.++++.+.++|+|+|.+.++ .+......++.+.... .++++.++||| +
T Consensus 182 ~~av~~ar~~~~~~~I~Vev~t~eea~eal~aGaD~I~LDn~-------~~~~~~~~v~~l~~~~--~~v~ieaSGGI-t 251 (284)
T 1qpo_A 182 VDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNF-------AVWQTQTAVQRRDSRA--PTVMLESSGGL-S 251 (284)
T ss_dssp HHHHHHHHHHCTTSCEEEEESSHHHHHHHGGGCCSEEEEETC-------CHHHHHHHHHHHHHHC--TTCEEEEESSC-C
T ss_pred HHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHcCCCEEEECCC-------CHHHHHHHHHHhhccC--CCeEEEEECCC-C
Confidence 345666665433 8888999999999999999999999653 1111122333333222 25899999999 9
Q ss_pred HHHHHHHHHcCcceeeecccccc
Q 020013 178 ARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 178 ~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
++++.++...|+|.+.+|+..-.
T Consensus 252 ~~~i~~~a~tGVD~isvG~l~~~ 274 (284)
T 1qpo_A 252 LQTAATYAETGVDYLAVGALTHS 274 (284)
T ss_dssp TTTHHHHHHTTCSEEECGGGTSS
T ss_pred HHHHHHHHhcCCCEEEECHHHcC
Confidence 99999999999999999995443
No 162
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.84 E-value=7.3e-05 Score=71.00 Aligned_cols=91 Identities=29% Similarity=0.448 Sum_probs=66.2
Q ss_pred HHHHHHHhCCCEEEEecC---CHHHHHHHHHcCCCEEEEecCC-CCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcC
Q 020013 101 ELVLEAHSAGVKVVPQVG---SFDEARKAVNAGVDAIIVQGRE-AGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIV 176 (332)
Q Consensus 101 ~~i~~~~~~g~~v~~~v~---s~~~a~~a~~~g~D~ivv~G~e-aGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~ 176 (332)
++++++++.+.+++..+. ..+.++.+.+.|+|++.+.+.. ..+|. ++...+..+.++++.. ++||++ |||.
T Consensus 146 ~~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~-~~~~~~~~i~~l~~~~---~~pvi~-ggi~ 220 (393)
T 2qr6_A 146 ERIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHV-NTGGEALNLKEFIGSL---DVPVIA-GGVN 220 (393)
T ss_dssp HHHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCC-CC-----CHHHHHHHC---SSCEEE-ECCC
T ss_pred HHHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccC-CCcccHHHHHHHHHhc---CCCEEE-CCcC
Confidence 456777788888877665 2344566678899999988654 23343 2222455677888876 799999 8888
Q ss_pred CHHHHHHHHHcCcceeeecc
Q 020013 177 DARGYVAALSLGAQGICLGT 196 (332)
Q Consensus 177 ~~~~v~~al~~GA~gV~~GT 196 (332)
+++++..++.+|||+|.+|+
T Consensus 221 t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 221 DYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp SHHHHHHHHTTTCSEEEESC
T ss_pred CHHHHHHHHHcCCCEEEECC
Confidence 99999999999999999986
No 163
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=97.84 E-value=0.00058 Score=57.57 Aligned_cols=131 Identities=17% Similarity=0.135 Sum_probs=91.4
Q ss_pred HHHHHHHHHHhhcCCcEEEEeec---CCCCHHHHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEec---CC--H-
Q 020013 50 YLRDLIRKTRSLTERPFGVGVVL---AFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQV---GS--F- 120 (332)
Q Consensus 50 ~~~~~i~~~r~~~~~p~gvnl~~---~~~~~~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v---~s--~- 120 (332)
.+.+.++++++. ++|.-+++=. -.+++..++.+...+++.|... ....++.+++.|+..+..+ .| .
T Consensus 44 ~L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIsT----k~~~i~~Akk~GL~tIqR~FliDs~al~ 118 (188)
T 1vkf_A 44 NLKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIITI----KPKNYVVAKKNGIPAVLRFFALDSKAVE 118 (188)
T ss_dssp THHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEES----CHHHHHHHHHTTCCEEEEEECCSHHHHH
T ss_pred HHHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEcC----cHHHHHHHHHcCCEEeeEEEEEEeHHHh
Confidence 477888888876 7777776422 1234566666655699999765 3567888999998776543 22 2
Q ss_pred HHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 121 DEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 121 ~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
...+......+|++=+- . +. ..|++.+.+ .++|+|+.|+|.|.+++.+ +++||++|..|+.=|+
T Consensus 119 ~~~~~I~~~kPD~iEiL-------P-g~-----v~p~~I~~v--~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW 182 (188)
T 1vkf_A 119 RGIEQIETLGVDVVEVL-------P-GA-----VAPKVARKI--PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILW 182 (188)
T ss_dssp HHHHHHHHHTCSEEEEE-------S-GG-----GHHHHHTTS--TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHH
T ss_pred hhhhhccccCCCeEeec-------C-CC-----chHHHHHHh--cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHh
Confidence 23344556789987542 0 11 134444444 3899999999999999999 9999999999988665
Q ss_pred C
Q 020013 201 S 201 (332)
Q Consensus 201 t 201 (332)
.
T Consensus 183 ~ 183 (188)
T 1vkf_A 183 K 183 (188)
T ss_dssp T
T ss_pred C
Confidence 4
No 164
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.79 E-value=8.6e-05 Score=66.97 Aligned_cols=86 Identities=21% Similarity=0.279 Sum_probs=68.4
Q ss_pred HHHHHHHHh--CCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCC
Q 020013 100 EELVLEAHS--AGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD 177 (332)
Q Consensus 100 ~~~i~~~~~--~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~ 177 (332)
.+.++++++ ...++...|.|.++++++.++|+|+|.++++ . ...++++++.+.. ++++.++||| +
T Consensus 186 ~~Av~~ar~~~~~~~IeVEv~tl~ea~eAl~aGaD~I~LDn~-------~----~~~l~~av~~~~~-~v~ieaSGGI-t 252 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEVEVTNLDELNQAIAAKADIVMLDNF-------S----GEDIDIAVSIARG-KVALEVSGNI-D 252 (287)
T ss_dssp HHHHHHHHHHCTTSCEEEEESSHHHHHHHHHTTCSEEEEESC-------C----HHHHHHHHHHHTT-TCEEEEESSC-C
T ss_pred HHHHHHHHhhCCCCcEEEEeCCHHHHHHHHHcCCCEEEEcCC-------C----HHHHHHHHHhhcC-CceEEEECCC-C
Confidence 445566655 3578889999999999999999999999653 1 2345565555532 6899999999 9
Q ss_pred HHHHHHHHHcCcceeeecccc
Q 020013 178 ARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 178 ~~~v~~al~~GA~gV~~GT~f 198 (332)
.+++.++...|+|.+.+|+-.
T Consensus 253 ~~~i~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 253 RNSIVAIAKTGVDFISVGAIT 273 (287)
T ss_dssp TTTHHHHHTTTCSEEECSHHH
T ss_pred HHHHHHHHHcCCCEEEEChhh
Confidence 999999999999999998753
No 165
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.73 E-value=0.00021 Score=65.43 Aligned_cols=85 Identities=18% Similarity=0.286 Sum_probs=67.6
Q ss_pred HHHHHHHHh--CCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCC
Q 020013 100 EELVLEAHS--AGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD 177 (332)
Q Consensus 100 ~~~i~~~~~--~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~ 177 (332)
.+-++.+++ ...++...|.|.++++++.++|+|+|.++++ +...++++++.+.. ++++.++||| |
T Consensus 219 ~~Av~~ar~~~p~~kIeVEVdtldea~eAl~aGaD~I~LDn~-----------~~~~l~~av~~l~~-~v~ieaSGGI-t 285 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVETETLAELEEAISAGADIIMLDNF-----------SLEMMREAVKINAG-RAALENSGNI-T 285 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEESSHHHHHHHHHTTCSEEEEESC-----------CHHHHHHHHHHHTT-SSEEEEESSC-C
T ss_pred HHHHHHHHHhCCCCeEEEEECCHHHHHHHHHcCCCEEEECCC-----------CHHHHHHHHHHhCC-CCeEEEECCC-C
Confidence 344555554 2467888999999999999999999999653 13445666665542 6999999999 9
Q ss_pred HHHHHHHHHcCcceeeeccc
Q 020013 178 ARGYVAALSLGAQGICLGTR 197 (332)
Q Consensus 178 ~~~v~~al~~GA~gV~~GT~ 197 (332)
.+++.++...|+|.+.+|+.
T Consensus 286 ~~~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 286 LDNLKECAETGVDYISVGAL 305 (320)
T ss_dssp HHHHHHHHTTTCSEEECTHH
T ss_pred HHHHHHHHHcCCCEEEECce
Confidence 99999999999999999984
No 166
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.72 E-value=5.4e-05 Score=66.71 Aligned_cols=78 Identities=21% Similarity=0.357 Sum_probs=61.4
Q ss_pred CHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccc
Q 020013 119 SFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 119 s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~f 198 (332)
..+.++.+.+.|+|+|.+......+. .....+.++.++++.. ++|+++.|||.+++++.+++.+|||+|.+|+.+
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~~--~~~~~~~~i~~i~~~~---~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~ 109 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAPE--GRATFIDSVKRVAEAV---SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAA 109 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCTT--THHHHHHHHHHHHHHC---SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCcccc--CCcccHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 45677788899999998876543322 1123466777887776 799999999999999999999999999999988
Q ss_pred ccC
Q 020013 199 VAS 201 (332)
Q Consensus 199 l~t 201 (332)
+..
T Consensus 110 ~~~ 112 (253)
T 1h5y_A 110 VRN 112 (253)
T ss_dssp HHC
T ss_pred hhC
Confidence 754
No 167
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.67 E-value=0.00027 Score=63.93 Aligned_cols=86 Identities=14% Similarity=0.217 Sum_probs=68.5
Q ss_pred HHHHHHHHh--CCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCC
Q 020013 100 EELVLEAHS--AGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD 177 (332)
Q Consensus 100 ~~~i~~~~~--~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~ 177 (332)
.+.++++++ ...++...|.|.+|++.+.++|+|.|.++++. ...++++++.+.. ++.+.++||| +
T Consensus 195 ~~Av~~ar~~~p~~kIeVEv~tl~e~~eAl~aGaDiImLDn~s-----------~~~l~~av~~~~~-~v~leaSGGI-t 261 (300)
T 3l0g_A 195 TLAIQRLRKNLKNEYIAIECDNISQVEESLSNNVDMILLDNMS-----------ISEIKKAVDIVNG-KSVLEVSGCV-N 261 (300)
T ss_dssp HHHHHHHHHHSSSCCEEEEESSHHHHHHHHHTTCSEEEEESCC-----------HHHHHHHHHHHTT-SSEEEEESSC-C
T ss_pred HHHHHHHHHhCCCCCEEEEECCHHHHHHHHHcCCCEEEECCCC-----------HHHHHHHHHhhcC-ceEEEEECCC-C
Confidence 344555554 35788899999999999999999999997641 2445555555543 6899999999 8
Q ss_pred HHHHHHHHHcCcceeeecccc
Q 020013 178 ARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 178 ~~~v~~al~~GA~gV~~GT~f 198 (332)
.+++.++...|+|.+.+|+..
T Consensus 262 ~~~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 262 IRNVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp TTTHHHHHTTTCSEEECGGGT
T ss_pred HHHHHHHHHcCCCEEEeCccc
Confidence 999999999999999999753
No 168
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.67 E-value=9.3e-05 Score=67.57 Aligned_cols=76 Identities=21% Similarity=0.229 Sum_probs=59.9
Q ss_pred CEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhC--CCCCcEEeecCcCCHHHHHHHHHcC
Q 020013 111 VKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIG--DRDIPIIAAGGIVDARGYVAALSLG 188 (332)
Q Consensus 111 ~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~--~~~iPviaaGGI~~~~~v~~al~~G 188 (332)
.++...+.+.++++.+.+.|+|+|.+... + ...+.++++.++ ..++||.++||| |.+++.++...|
T Consensus 198 ~~i~vev~tlee~~~A~~aGaD~I~ld~~-------~----~~~l~~~v~~l~~~~~~~~I~ASGGI-t~~ni~~~~~aG 265 (299)
T 2jbm_A 198 LKVEVECSSLQEAVQAAEAGADLVLLDNF-------K----PEELHPTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPH 265 (299)
T ss_dssp SCEEEEESSHHHHHHHHHTTCSEEEEESC-------C----HHHHHHHHHHHHHHCTTSEEEEESSC-CTTTHHHHCCTT
T ss_pred CeEEEecCCHHHHHHHHHcCCCEEEECCC-------C----HHHHHHHHHHhhccCCCeeEEEECCC-CHHHHHHHHHCC
Confidence 68889999999999999999999998542 1 233333333331 125899999999 999999999999
Q ss_pred cceeeecccc
Q 020013 189 AQGICLGTRF 198 (332)
Q Consensus 189 A~gV~~GT~f 198 (332)
+|++.+|+.+
T Consensus 266 aD~i~vGs~i 275 (299)
T 2jbm_A 266 IDVISMGMLT 275 (299)
T ss_dssp CCEEECTHHH
T ss_pred CCEEEEChhh
Confidence 9999999954
No 169
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.66 E-value=0.00013 Score=66.37 Aligned_cols=85 Identities=21% Similarity=0.225 Sum_probs=65.5
Q ss_pred HHHHHHHhC--CCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCH
Q 020013 101 ELVLEAHSA--GVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDA 178 (332)
Q Consensus 101 ~~i~~~~~~--g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~ 178 (332)
+-++.+++. ..++...+.+.++++.+.+.|+|+|.+.. .+...+.++++.+.. ++|+.++||| |.
T Consensus 197 ~ai~~~r~~~~~~kI~vev~tlee~~eA~~aGaD~I~ld~-----------~~~e~l~~~v~~~~~-~~~I~ASGGI-t~ 263 (296)
T 1qap_A 197 QAVEKAFWLHPDVPVEVEVENLDELDDALKAGADIIMLDN-----------FNTDQMREAVKRVNG-QARLEVSGNV-TA 263 (296)
T ss_dssp HHHHHHHHHSTTSCEEEEESSHHHHHHHHHTTCSEEEESS-----------CCHHHHHHHHHTTCT-TCCEEECCCS-CH
T ss_pred HHHHHHHHhCCCCcEEEEeCCHHHHHHHHHcCCCEEEECC-----------CCHHHHHHHHHHhCC-CCeEEEECCC-CH
Confidence 334445442 22788899999999999999999998843 123455565555532 6999999999 99
Q ss_pred HHHHHHHHcCcceeeecccc
Q 020013 179 RGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 179 ~~v~~al~~GA~gV~~GT~f 198 (332)
+++.++...|+|++.+|+..
T Consensus 264 ~~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 264 ETLREFAETGVDFISVGALT 283 (296)
T ss_dssp HHHHHHHHTTCSEEECSHHH
T ss_pred HHHHHHHHcCCCEEEEeHHH
Confidence 99999999999999999853
No 170
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.66 E-value=0.00031 Score=60.65 Aligned_cols=89 Identities=24% Similarity=0.300 Sum_probs=64.3
Q ss_pred HHHHHHHHcCCCEEEEecC-CCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 121 DEARKAVNAGVDAIIVQGR-EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 121 ~~a~~a~~~g~D~ivv~G~-eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
+.++.....++..+++.+. +.|... +. ...++.++.... ++|+|+.||+++++++.+++..||+||++||+|.
T Consensus 134 ~~i~~~~~~~~~~vli~~~~~~g~~~-g~--~~~~i~~~~~~~---~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~ 207 (237)
T 3cwo_X 134 DWVVEVEKRGAGEILLTSIDRDGTKS-GY--DTEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLAGADAALAASVFH 207 (237)
T ss_dssp HHHHHHHHHTCSEEEEEETTTTTCCS-CC--CHHHHHHHGGGC---CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred HHHHHHhhcCCCeEEEEecCCCCccc-cc--cHHHHHHHHHhc---CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHH
Confidence 4456667778887887774 333221 22 266777777655 7999999999999999999999999999999998
Q ss_pred cCccCCCCHHHHHHHhcC
Q 020013 200 ASEESYAHPEYKRKLVEM 217 (332)
Q Consensus 200 ~t~Es~~~~~~k~~~~~~ 217 (332)
..+. .-...++.+.+.
T Consensus 208 ~~~~--~~~~~~~~l~~~ 223 (237)
T 3cwo_X 208 FREI--DVRELKEYLKKH 223 (237)
T ss_dssp TTSS--CHHHHHHHHHTT
T ss_pred cCCC--CHHHHHHHHHHC
Confidence 5543 244556665543
No 171
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=97.63 E-value=0.00038 Score=65.68 Aligned_cols=72 Identities=13% Similarity=0.085 Sum_probs=54.3
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeeccccccC
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVAS 201 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~GT~fl~t 201 (332)
++.+.+.|+|+|-+.+..... . . .. .. +.++++.+ ++|||+.||| +++++.++++.| ||.|.+|+.|+..
T Consensus 272 a~~l~~~Gvd~i~v~~~~~~~-~-~-~~-~~-~~~ir~~~---~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~~ 342 (379)
T 3aty_A 272 CKKIEPLSLAYLHYLRGDMVN-Q-Q-IG-DV-VAWVRGSY---SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIAN 342 (379)
T ss_dssp HHHHGGGCCSEEEEECSCTTS-C-C-CC-CH-HHHHHTTC---CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHhCCCEEEEcCCCcCC-C-C-cc-HH-HHHHHHHC---CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHhC
Confidence 445667899999996531101 1 1 11 24 66777766 7999999999 999999999998 9999999999986
Q ss_pred cc
Q 020013 202 EE 203 (332)
Q Consensus 202 ~E 203 (332)
++
T Consensus 343 P~ 344 (379)
T 3aty_A 343 PD 344 (379)
T ss_dssp TT
T ss_pred cH
Confidence 43
No 172
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.60 E-value=0.00021 Score=64.77 Aligned_cols=85 Identities=19% Similarity=0.290 Sum_probs=65.8
Q ss_pred HHHHHHHHhC--CCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCC
Q 020013 100 EELVLEAHSA--GVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD 177 (332)
Q Consensus 100 ~~~i~~~~~~--g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~ 177 (332)
.+-++.+++. ..++...|.|.++++++.++|+|+|.+++.. ...+.++++.+.. ++++.++||| |
T Consensus 197 ~~Av~~~r~~~p~~~ieVEvdtlde~~eAl~aGaD~I~LDn~~-----------~~~l~~av~~i~~-~v~ieaSGGI-~ 263 (298)
T 3gnn_A 197 GEALDAAFALNAEVPVQIEVETLDQLRTALAHGARSVLLDNFT-----------LDMMRDAVRVTEG-RAVLEVSGGV-N 263 (298)
T ss_dssp HHHHHHHHHHC--CCCEEEESSHHHHHHHHHTTCEEEEEESCC-----------HHHHHHHHHHHTT-SEEEEEESSC-S
T ss_pred HHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHcCCCEEEECCCC-----------HHHHHHHHHHhCC-CCeEEEEcCC-C
Confidence 3445555543 4677888999999999999999999997631 2334454444422 6899999999 9
Q ss_pred HHHHHHHHHcCcceeeeccc
Q 020013 178 ARGYVAALSLGAQGICLGTR 197 (332)
Q Consensus 178 ~~~v~~al~~GA~gV~~GT~ 197 (332)
.+++.++...|+|.+.+|+.
T Consensus 264 ~~~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 264 FDTVRAIAETGVDRISIGAL 283 (298)
T ss_dssp TTTHHHHHHTTCSEEECGGG
T ss_pred HHHHHHHHHcCCCEEEECCe
Confidence 99999999999999999995
No 173
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.59 E-value=0.0013 Score=58.39 Aligned_cols=105 Identities=20% Similarity=0.241 Sum_probs=64.6
Q ss_pred HHHHHhcCCcEEEEcc-------CCCcHHH---HHHHHh-C-C--CEEEEecC--CHHHHH----HHHHcCCCEEEE-ec
Q 020013 80 IKAILSEKVAVLQVSW-------GEYSEEL---VLEAHS-A-G--VKVVPQVG--SFDEAR----KAVNAGVDAIIV-QG 138 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~-------g~~~~~~---i~~~~~-~-g--~~v~~~v~--s~~~a~----~a~~~g~D~ivv-~G 138 (332)
.+.+++.|+|-|.+.. |. ...+ ++.+++ . + +|++.... +.++.. .+.++|+|+|.. .|
T Consensus 117 a~~Ai~~GAdEIDmViNig~lk~g~-~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTG 195 (260)
T 3r12_A 117 AIFAVESGADEIDMVINVGMLKAKE-WEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTG 195 (260)
T ss_dssp HHHHHHHTCSEEEEECCHHHHHTTC-HHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred HHHHHHcCCCEEEEEeehhhhcccc-HHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCC
Confidence 4567788999887652 22 1222 223332 2 3 34443322 444443 356899999986 34
Q ss_pred CCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCccee
Q 020013 139 REAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGI 192 (332)
Q Consensus 139 ~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV 192 (332)
+..+| .++.-+..+++.++ .+++|-++|||.+.+++.+++.+||+-+
T Consensus 196 f~~~G------AT~edV~lm~~~vg-~~v~VKaAGGIrt~~~al~mi~aGA~Ri 242 (260)
T 3r12_A 196 FGTGG------ATAEDVHLMKWIVG-DEMGVKASGGIRTFEDAVKMIMYGADRI 242 (260)
T ss_dssp SSSCC------CCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCCCC------CCHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 43333 22334444444443 3799999999999999999999999943
No 174
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.58 E-value=0.00011 Score=64.85 Aligned_cols=78 Identities=26% Similarity=0.305 Sum_probs=60.6
Q ss_pred CHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccc
Q 020013 119 SFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 119 s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~f 198 (332)
..+.++.+.+.|+|.|-+...++ +..+.... ..+.++++.. ++|+++.|||.+++++..++.+|||+|.+|+..
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~--~~~~~~~~-~~i~~i~~~~---~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~ 106 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDA--AFGRGSNH-ELLAEVVGKL---DVQVELSGGIRDDESLAAALATGCARVNVGTAA 106 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHH--HTTSCCCH-HHHHHHHHHC---SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHHHcCCCEEEEEcCcc--cccCCChH-HHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHcCCCEEEECchH
Confidence 34567778889999999864321 11122233 7788888876 799999999999999999999999999999998
Q ss_pred ccCc
Q 020013 199 VASE 202 (332)
Q Consensus 199 l~t~ 202 (332)
+..+
T Consensus 107 l~~p 110 (244)
T 2y88_A 107 LENP 110 (244)
T ss_dssp HHCH
T ss_pred hhCh
Confidence 7654
No 175
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=97.55 E-value=0.00093 Score=57.17 Aligned_cols=100 Identities=20% Similarity=0.308 Sum_probs=70.7
Q ss_pred HHHHHHHhcCCcEEEEccCCCc-HHHHHHHHhC---CCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchh
Q 020013 78 ENIKAILSEKVAVLQVSWGEYS-EELVLEAHSA---GVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLI 152 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~~-~~~i~~~~~~---g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~ 152 (332)
+.++.+.+.|+++|.+++..+. .+.++.+++. +..+.. .+.++++++.+.+.|+|+| +. + +. . .
T Consensus 26 ~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~-~---~~---~---~ 94 (205)
T 1wa3_A 26 EKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VS-P---HL---D---E 94 (205)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-EC-S---SC---C---H
T ss_pred HHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-Ec-C---CC---C---H
Confidence 3456667789999999876532 3456666653 456555 5689999999999999999 41 1 11 1 2
Q ss_pred hhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeee
Q 020013 153 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 153 ~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~ 194 (332)
.++....+ . ++|++. |+.|+.++..++.+|+|.|-+
T Consensus 95 ~~~~~~~~-~---g~~vi~--g~~t~~e~~~a~~~Gad~vk~ 130 (205)
T 1wa3_A 95 EISQFCKE-K---GVFYMP--GVMTPTELVKAMKLGHTILKL 130 (205)
T ss_dssp HHHHHHHH-H---TCEEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHH-c---CCcEEC--CcCCHHHHHHHHHcCCCEEEE
Confidence 34444333 3 799987 777999999999999998875
No 176
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.53 E-value=0.00012 Score=64.59 Aligned_cols=77 Identities=25% Similarity=0.321 Sum_probs=59.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 120 FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
.+.++.+.+.|+|.|-+...+. +..+.... ..+.++++.. ++|+++.|||.+++++..++.+|||+|.+|+..+
T Consensus 35 ~~~a~~~~~~Gad~i~v~~~d~--~~~~~~~~-~~i~~i~~~~---~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l 108 (244)
T 1vzw_A 35 LEAALAWQRSGAEWLHLVDLDA--AFGTGDNR-ALIAEVAQAM---DIKVELSGGIRDDDTLAAALATGCTRVNLGTAAL 108 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHH--HHTSCCCH-HHHHHHHHHC---SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCch--hhcCCChH-HHHHHHHHhc---CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHh
Confidence 4566777889999998865321 11122234 7788888776 7999999999999999999999999999999887
Q ss_pred cCc
Q 020013 200 ASE 202 (332)
Q Consensus 200 ~t~ 202 (332)
..+
T Consensus 109 ~~p 111 (244)
T 1vzw_A 109 ETP 111 (244)
T ss_dssp HCH
T ss_pred hCH
Confidence 653
No 177
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.50 E-value=8.9e-05 Score=67.54 Aligned_cols=76 Identities=21% Similarity=0.225 Sum_probs=49.0
Q ss_pred CEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCC-----CCCcEEeecCcCCHHHHHHHH
Q 020013 111 VKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGD-----RDIPIIAAGGIVDARGYVAAL 185 (332)
Q Consensus 111 ~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~-----~~iPviaaGGI~~~~~v~~al 185 (332)
.++...+.+.++++.+.+.|+|+|.+... + ...+.++++.++. .++|+.++||| |.+++.++.
T Consensus 200 ~~i~vev~tlee~~~A~~aGaD~I~ld~~-------~----~~~l~~~v~~l~~~~~g~~~v~I~ASGGI-t~~ni~~~~ 267 (294)
T 3c2e_A 200 VKIEVECLSEDEATEAIEAGADVIMLDNF-------K----GDGLKMCAQSLKNKWNGKKHFLLECSGGL-NLDNLEEYL 267 (294)
T ss_dssp SCEEEECSSSHHHHHHHHHTCSEEECCC--------------------------------CCEEEEECCC-CC------C
T ss_pred CeEEEecCCHHHHHHHHHcCCCEEEECCC-------C----HHHHHHHHHHhcccccCCCCeEEEEECCC-CHHHHHHHH
Confidence 68888999999999999999999988432 1 1223333333321 13899999999 999999999
Q ss_pred HcCcceeeecccc
Q 020013 186 SLGAQGICLGTRF 198 (332)
Q Consensus 186 ~~GA~gV~~GT~f 198 (332)
..|+|++.+|+..
T Consensus 268 ~~GvD~i~vGs~i 280 (294)
T 3c2e_A 268 CDDIDIYSTSSIH 280 (294)
T ss_dssp CCSCSEEECGGGT
T ss_pred HcCCCEEEEechh
Confidence 9999999999985
No 178
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=97.41 E-value=8.1e-05 Score=66.08 Aligned_cols=140 Identities=14% Similarity=0.093 Sum_probs=79.5
Q ss_pred HHHHHHhh-cCCcEEEEeecCCCC--HHHHHHHHhcCCcEEEEccCCCc---HHHHHHHHhCCC---EEEE-ec-CCH--
Q 020013 54 LIRKTRSL-TERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSWGEYS---EELVLEAHSAGV---KVVP-QV-GSF-- 120 (332)
Q Consensus 54 ~i~~~r~~-~~~p~gvnl~~~~~~--~~~~~~~~~~~~~~I~~~~g~~~---~~~i~~~~~~g~---~v~~-~v-~s~-- 120 (332)
.++.+|+. +..++-+.++ ..+. ..+++.+.+.|+|.|.+|.-... ...++.+++.|. .++. .+ ++.
T Consensus 57 ~v~~lr~~~~~v~lD~kl~-Dip~t~~~~i~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~ 135 (245)
T 1eix_A 57 FVRELQQRGFDIFLDLKFH-DIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEA 135 (245)
T ss_dssp HHHHHHHTTCCEEEEEEEC-SCHHHHHHHHHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGGGGGCCEEEEECSCTTCCH
T ss_pred HHHHHHHCCCcEEEEeecc-ccHHHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCH
Confidence 45666665 4556667766 3331 13677788899999999942211 234444555565 3442 22 222
Q ss_pred HHHHHHHHcCC-----CEEEEe---cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHH-----------HH
Q 020013 121 DEARKAVNAGV-----DAIIVQ---GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDAR-----------GY 181 (332)
Q Consensus 121 ~~a~~a~~~g~-----D~ivv~---G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~-----------~v 181 (332)
++.+ +.+. |.|+.- ..+.|+.. --.+... +.++++..+ +.+++.+||| +++ ++
T Consensus 136 ~~l~---~~~~~~~~~d~Vl~ma~~~~~~G~~g-~V~~~~e-i~~lr~~~~--~~~i~v~gGI-~~~g~~~~dq~rv~t~ 207 (245)
T 1eix_A 136 SDLV---DLGMTLSPADYAERLAALTQKCGLDG-VVCSAQE-AVRFKQVFG--QEFKLVTPGI-RPQGSEAGDQRRIMTP 207 (245)
T ss_dssp HHHH---TTTCCSCHHHHHHHHHHHHHHTTCSE-EECCGGG-HHHHHHHHC--SSSEEEECCB-CCTTCCCTTCCSCBCH
T ss_pred HHHH---HhccCCCHHHHHHHHHHHHHHcCCCe-EEeCHHH-HHHHHHhcC--CCCEEEECCc-CCCCCCccchhccCCH
Confidence 2221 1111 222111 22222221 0012234 667776663 4689999999 567 79
Q ss_pred HHHHHcCcceeeeccccccCc
Q 020013 182 VAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 182 ~~al~~GA~gV~~GT~fl~t~ 202 (332)
.+++.+|||.+++|+.++.++
T Consensus 208 ~~a~~aGad~iVvGr~I~~a~ 228 (245)
T 1eix_A 208 EQALSAGVDYMVIGRPVTQSV 228 (245)
T ss_dssp HHHHHTTCSEEEECHHHHTSS
T ss_pred HHHHHcCCCEEEECHHHcCCC
Confidence 999999999999999988753
No 179
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.40 E-value=0.0012 Score=57.69 Aligned_cols=106 Identities=20% Similarity=0.324 Sum_probs=65.3
Q ss_pred HHHHHHhcCCcEEEEcc-------CCCcHHH---HHHHHhC--C--CEEEEec------CCHHHHH----HHHHcCCCEE
Q 020013 79 NIKAILSEKVAVLQVSW-------GEYSEEL---VLEAHSA--G--VKVVPQV------GSFDEAR----KAVNAGVDAI 134 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~-------g~~~~~~---i~~~~~~--g--~~v~~~v------~s~~~a~----~a~~~g~D~i 134 (332)
..+.+++.|+|-|.+.. |. ...+ ++.+++. + +|++... .+.++.. .+.++|+|+|
T Consensus 85 E~~~Ai~~GAdEIDmVinig~lk~g~-~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfV 163 (231)
T 3ndo_A 85 EAELAVAAGATEIDMVIDVGAALAGD-LDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVARDAGADFV 163 (231)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTC-HHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEEEeehHhhhccc-HHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEE
Confidence 35567888999987652 22 2222 2233322 3 3444322 1444443 3568999999
Q ss_pred EE-ecCC-CCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCccee
Q 020013 135 IV-QGRE-AGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGI 192 (332)
Q Consensus 135 vv-~G~e-aGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV 192 (332)
.. .|+. .||- +..-+..+++.++ .+++|-++|||.+.+++.+++.+||+-+
T Consensus 164 KTSTGf~~~~gA------t~edv~lm~~~v~-~~v~VKaaGGIrt~~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 164 KTSTGFHPSGGA------SVQAVEIMARTVG-ERLGVKASGGIRTAEQAAAMLDAGATRL 216 (231)
T ss_dssp ECCCSCCTTCSC------CHHHHHHHHHHHT-TTSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred EcCCCCCCCCCC------CHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHhcchhc
Confidence 86 3443 3332 2334444444443 2799999999999999999999999943
No 180
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.40 E-value=0.00062 Score=69.22 Aligned_cols=157 Identities=12% Similarity=0.119 Sum_probs=91.8
Q ss_pred HHHHhcCCcEEEEccCCC-----------------------------cHHHHHHHHhC---CCEEEEecC---------C
Q 020013 81 KAILSEKVAVLQVSWGEY-----------------------------SEELVLEAHSA---GVKVVPQVG---------S 119 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~~-----------------------------~~~~i~~~~~~---g~~v~~~v~---------s 119 (332)
+.+.++|.|.|.+|.+.. ..++++.+++. ..+|...++ +
T Consensus 163 ~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~ 242 (690)
T 3k30_A 163 RRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGIT 242 (690)
T ss_dssp HHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCC
T ss_pred HHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCC
Confidence 345678999999975321 12455555543 456665441 2
Q ss_pred HHHHH---HHHHcCCCEEEEecCCCCcccC-----CCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cc
Q 020013 120 FDEAR---KAVNAGVDAIIVQGREAGGHVI-----GQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQ 190 (332)
Q Consensus 120 ~~~a~---~a~~~g~D~ivv~G~eaGGh~~-----~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~ 190 (332)
.++.. +.++.++|++-+.+.....+.. .....+.++..+++.+ ++|||+.|||.+++++.++++.| ||
T Consensus 243 ~~~~~~~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pvi~~G~i~~~~~a~~~l~~g~~d 319 (690)
T 3k30_A 243 REDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT---TKPVVGVGRFTSPDAMVRQIKAGILD 319 (690)
T ss_dssp HHHHHHHHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC---SSCEEECSCCCCHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHhhcCEEEEecccccccCCCCccCCccccHHHHHHHHHHc---CCeEEEeCCCCCHHHHHHHHHCCCcc
Confidence 34332 2334489999886421111000 0111234555666665 79999999999999999999988 99
Q ss_pred eeeeccccccCccCCCCHHHHHHHhcCCCceEEEEecc-----cCCCCCCceeecChHHHh
Q 020013 191 GICLGTRFVASEESYAHPEYKRKLVEMDKTEYTDVFGR-----ARWPGAPHRVLQTPFFSN 246 (332)
Q Consensus 191 gV~~GT~fl~t~Es~~~~~~k~~~~~~~~t~~t~~~~~-----~~~~g~~~R~l~n~~~~~ 246 (332)
.|.+|+.|+..++ +=+++.+....++...++- ....+.+.++..||.+-.
T Consensus 320 ~v~~gR~~~~~P~------~~~~~~~g~~~~i~~c~~c~~C~~~~~~~~~~~C~vnp~~g~ 374 (690)
T 3k30_A 320 LIGAARPSIADPF------LPNKIRDGRLNLIRECIGCNICVSGDLTMSPIRCTQNPSMGE 374 (690)
T ss_dssp EEEESHHHHHCTT------HHHHHHTTCGGGCCCCCCCCHHHHHHHTTSCCCCSSCTTTTT
T ss_pred eEEEcHHhHhCcc------HHHHHHcCCccccccccchhhhhhcccCCCcccCCcCcccCc
Confidence 9999999998754 3334444322211110100 001245677888887753
No 181
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=97.33 E-value=0.00061 Score=60.37 Aligned_cols=141 Identities=12% Similarity=0.117 Sum_probs=78.7
Q ss_pred HHHHHHhh-cCCcEEEEeecCCCC--HHHHHHHHhcCCcEEEEcc--CCC-cHHHHHHHHh---CCCE---EE-Eec-CC
Q 020013 54 LIRKTRSL-TERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSW--GEY-SEELVLEAHS---AGVK---VV-PQV-GS 119 (332)
Q Consensus 54 ~i~~~r~~-~~~p~gvnl~~~~~~--~~~~~~~~~~~~~~I~~~~--g~~-~~~~i~~~~~---~g~~---v~-~~v-~s 119 (332)
.++.+|+. +..++-+.++ ..+. ..+++.+.+.|+|.|.+|. |.. ....++.+++ .|.+ ++ ... ++
T Consensus 47 ~v~~lr~~~~~v~lD~kl~-Dip~t~~~~~~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts 125 (246)
T 2yyu_A 47 IVAFLKEQGHAVFLDLKLH-DIPNTVKQAMKGLARVGADLVNVHAAGGRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTS 125 (246)
T ss_dssp HHHHHHHTTCEEEEEEEEC-SCHHHHHHHHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHHHHSCSSSCCCEEEEESSCTT
T ss_pred HHHHHHHCCCeEEEEeecc-cchHHHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHhhcccCCcCCCEEEEEeCCC
Confidence 35566665 3455666665 3331 1266778889999999984 221 1345666776 5632 34 222 23
Q ss_pred H--HHHHHHHHcCC-----CEEEEe---cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHH----------
Q 020013 120 F--DEARKAVNAGV-----DAIIVQ---GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDAR---------- 179 (332)
Q Consensus 120 ~--~~a~~a~~~g~-----D~ivv~---G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~---------- 179 (332)
. ++.. .+.+. |.|+.- ..+.|+.. --.+... +.++++..+ ..+++.+||| +++
T Consensus 126 ~~~~~l~--~~~~~~~~~~d~Vl~ma~~~~~~G~~g-~V~~~~e-i~~lr~~~~--~~~i~V~gGI-~~~g~~~~dq~rv 198 (246)
T 2yyu_A 126 TDERMLH--EELWISRPLVETVAHYAALAKESGLDG-VVCSANE-AAFIKERCG--ASFLAVTPGI-RFADDAAHDQVRV 198 (246)
T ss_dssp CCHHHHH--HTSCCCSCHHHHHHHHHHHHHHHTCCE-EECCHHH-HHHHHHHHC--TTSEEEECCC-CCCC-------CC
T ss_pred CCHHHHH--HHhcCCCCHHHHHHHHHHHHHHhCCCE-EEeCHHH-HHHHHHhcC--CCCEEEeCCc-CCCCCCccccccc
Confidence 1 3320 11111 222110 11222211 0012233 666666653 3469999999 456
Q ss_pred -HHHHHHHcCcceeeeccccccCc
Q 020013 180 -GYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 180 -~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
++.+++.+|||.+++|+.++.++
T Consensus 199 ~t~~~a~~aGad~iVvGr~I~~a~ 222 (246)
T 2yyu_A 199 VTPRKARALGSDYIVIGRSLTRAA 222 (246)
T ss_dssp CCHHHHHHHTCSEEEECHHHHTSS
T ss_pred CCHHHHHHcCCCEEEECHhhcCCC
Confidence 68999999999999999988753
No 182
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.25 E-value=0.0049 Score=53.93 Aligned_cols=100 Identities=16% Similarity=0.165 Sum_probs=73.3
Q ss_pred HHHHHHHhcCCcEEEEccCCC-cHHHHHHHHhC--CCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhh
Q 020013 78 ENIKAILSEKVAVLQVSWGEY-SEELVLEAHSA--GVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLIS 153 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~-~~~~i~~~~~~--g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ 153 (332)
+..+.+.+.|++.|++.+-.+ ..+.++.+++. ++.+. .+|.+.++++.+.++|+|+|+. .+ .+..
T Consensus 50 ~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvs-----P~------~~~~ 118 (232)
T 4e38_A 50 PLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVS-----PG------FNPN 118 (232)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEEC-----SS------CCHH
T ss_pred HHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEe-----CC------CCHH
Confidence 456778888999999875433 34677777663 44444 4577899999999999999974 11 1234
Q ss_pred hHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeee
Q 020013 154 LLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 154 ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~ 194 (332)
++....+ . ++|++. |+.|+.++.+++++|||.|-+
T Consensus 119 vi~~~~~-~---gi~~ip--Gv~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 119 TVRACQE-I---GIDIVP--GVNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHH-H---TCEEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHH-c---CCCEEc--CCCCHHHHHHHHHcCCCEEEE
Confidence 4444444 2 689888 688999999999999999975
No 183
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=97.20 E-value=0.011 Score=53.16 Aligned_cols=159 Identities=16% Similarity=0.195 Sum_probs=95.1
Q ss_pred CcHHHHHHHHhCCCceeec------CCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCC-----C--------HHHHHHH
Q 020013 23 SGPELVAAVANAGGLGLLR------APDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFP-----H--------NENIKAI 83 (332)
Q Consensus 23 s~~~la~avs~aGglG~i~------~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~-----~--------~~~~~~~ 83 (332)
.+.+-+.++.++|. .-|. .++ .+|. ...++.+++..+.| |++++.+. + .+.++.+
T Consensus 47 ~s~~~a~~A~~gGA-dRIELc~~l~~GG-lTPS--~g~i~~a~~~~~ip--V~vMIRPRgGdF~Ys~~E~~~M~~dI~~~ 120 (287)
T 3iwp_A 47 DSVESAVNAERGGA-DRIELCSGLSEGG-TTPS--MGVLQVVKQSVQIP--VFVMIRPRGGDFLYSDREIEVMKADIRLA 120 (287)
T ss_dssp SSHHHHHHHHHHTC-SEEEECBCGGGTC-BCCC--HHHHHHHHTTCCSC--EEEECCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCC-CEEEECCCCCCCC-CCCC--HHHHHHHHHhcCCC--eEEEEecCCCCcccCHHHHHHHHHHHHHH
Confidence 36777777766553 3332 222 3443 13456666655544 44454321 1 2457788
Q ss_pred HhcCCcEEEEcc----CCCcHHHHHHH-Hh-CCCEEE-Ee----cCCHHHHH-HHHHcCCCEEEEecCCCCcccCCCCch
Q 020013 84 LSEKVAVLQVSW----GEYSEELVLEA-HS-AGVKVV-PQ----VGSFDEAR-KAVNAGVDAIIVQGREAGGHVIGQDGL 151 (332)
Q Consensus 84 ~~~~~~~I~~~~----g~~~~~~i~~~-~~-~g~~v~-~~----v~s~~~a~-~a~~~g~D~ivv~G~eaGGh~~~~~~~ 151 (332)
.+.|+|.|.+++ |....+..+++ .. .++.+. +- +.++.++. ...+.|+|.|+..|. .. .....
T Consensus 121 ~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~----~~-~a~~G 195 (287)
T 3iwp_A 121 KLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGC----DS-SALEG 195 (287)
T ss_dssp HHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTT----SS-STTTT
T ss_pred HHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCC----CC-ChHHh
Confidence 899999999984 22233333333 22 244443 22 23555554 455679999998542 22 22234
Q ss_pred hhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHH-cCcceeee
Q 020013 152 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS-LGAQGICL 194 (332)
Q Consensus 152 ~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~ 194 (332)
+..|+++.+.... +++|++.||| +.+|+.+.+. .|++.+=+
T Consensus 196 l~~Lk~Lv~~a~~-rI~ImaGGGV-~~~Ni~~l~~~tG~~~~H~ 237 (287)
T 3iwp_A 196 LPLIKRLIEQAKG-RIVVMPGGGI-TDRNLQRILEGSGATEFHC 237 (287)
T ss_dssp HHHHHHHHHHHTT-SSEEEECTTC-CTTTHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHhCC-CCEEEECCCc-CHHHHHHHHHhhCCCEEeE
Confidence 6677777776543 6999999999 8999999987 89887765
No 184
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.13 E-value=0.00061 Score=60.30 Aligned_cols=79 Identities=13% Similarity=0.225 Sum_probs=59.8
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 120 FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
.+.|+...+.|+|.+.+---.+. ..+....+.++.++.+.. .+|+...|||.+.+++.++|.+||+-|.+||..+
T Consensus 34 ~~~a~~~~~~gad~lhvvDld~a--~~~~~~~~~~i~~i~~~~---~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~ 108 (243)
T 4gj1_A 34 LKKFKEYEKAGAKELHLVDLTGA--KDPSKRQFALIEKLAKEV---SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAI 108 (243)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHH--HCGGGCCHHHHHHHHHHC---CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTT
T ss_pred HHHHHHHHHCCCCEEEEEecCcc--cccchhHHHHHHHHHHhc---CCCeEeccccccHHHHHHHHHcCCCEEEEccccc
Confidence 35567777889998877322110 001123467888888876 7999999999999999999999999999999988
Q ss_pred cCcc
Q 020013 200 ASEE 203 (332)
Q Consensus 200 ~t~E 203 (332)
..++
T Consensus 109 ~~p~ 112 (243)
T 4gj1_A 109 KDAT 112 (243)
T ss_dssp TCHH
T ss_pred cCCc
Confidence 6543
No 185
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=97.08 E-value=0.0063 Score=56.79 Aligned_cols=110 Identities=23% Similarity=0.151 Sum_probs=71.9
Q ss_pred HHHHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEecC----CHHHHHHHHHcCCCEEEEecCCCCcccCCCCchh
Q 020013 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVG----SFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLI 152 (332)
Q Consensus 77 ~~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v~----s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~ 152 (332)
.+....+.+.|.-.+. +-...++++.+.+++....+...+. +.+.++.+.++|+|+|.++... ||. ...+
T Consensus 56 ~~lA~A~a~~Gg~gvi-~~~~s~ee~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~--G~~---~~~~ 129 (361)
T 3r2g_A 56 SNMANFMHSKGAMGAL-HRFMTIEENIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCVDVAH--AHA---KYVG 129 (361)
T ss_dssp HHHHHHHHHTTCEEBC-CSCSCHHHHHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEECSC--CSS---HHHH
T ss_pred HHHHHHHHHcCCCEEE-eCCCCHHHHHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCC--CCc---HhHH
Confidence 3444455555543332 2234456677777654433333332 2456777889999999886432 332 2346
Q ss_pred hhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeec
Q 020013 153 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 195 (332)
Q Consensus 153 ~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~G 195 (332)
..++.+++..+ ++||++ |+|.+++++..+..+|||+|.+|
T Consensus 130 e~I~~ir~~~~--~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 130 KTLKSLRQLLG--SRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHT--TCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhcC--CCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 67888887763 588886 67889999999999999999985
No 186
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=97.03 E-value=0.0012 Score=62.69 Aligned_cols=74 Identities=15% Similarity=0.130 Sum_probs=48.9
Q ss_pred HHcC--CCEEEEe-cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHc----Ccceeeeccccc
Q 020013 127 VNAG--VDAIIVQ-GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL----GAQGICLGTRFV 199 (332)
Q Consensus 127 ~~~g--~D~ivv~-G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~----GA~gV~~GT~fl 199 (332)
.+.| +|+|-+. +...+.........+..+..+++.. ++|||++|||.+.+++.+++.. +||.|.+|+.|+
T Consensus 274 ~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~~~ir~~~---~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~i 350 (407)
T 3tjl_A 274 ADKGQGIAYISVVEPRVSGNVDVSEEDQAGDNEFVSKIW---KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFT 350 (407)
T ss_dssp HHTTCCCSEEEEECTTEETTEECCGGGCCCCSHHHHHHC---CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHH
T ss_pred hhcCCceeEEEEEccccCCCCcCCccchhHHHHHHHHHh---CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhh
Confidence 6678 9999885 3211110001101123456666666 6899999999877766666654 599999999999
Q ss_pred cCcc
Q 020013 200 ASEE 203 (332)
Q Consensus 200 ~t~E 203 (332)
..+.
T Consensus 351 aNPd 354 (407)
T 3tjl_A 351 SNPN 354 (407)
T ss_dssp HCTT
T ss_pred hCch
Confidence 8754
No 187
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.02 E-value=0.0088 Score=51.67 Aligned_cols=118 Identities=17% Similarity=0.179 Sum_probs=80.8
Q ss_pred HHHHHHHhcCCcEEEEccCCC-cHHHHHHHHhC--CCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhh
Q 020013 78 ENIKAILSEKVAVLQVSWGEY-SEELVLEAHSA--GVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLIS 153 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~-~~~~i~~~~~~--g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ 153 (332)
...+.+.+.|++.|.+.+-.+ ..+.++.+++. +..|. .+|.+.++++.+.++|+++|+.-+ .+..
T Consensus 29 ~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP~-----------~~~e 97 (217)
T 3lab_A 29 PMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSPG-----------LTPE 97 (217)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEESS-----------CCHH
T ss_pred HHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeCC-----------CcHH
Confidence 345677888999999876442 34677777763 44443 467799999999999999998722 1234
Q ss_pred hHHHHHHHhCCCCC------cEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHHHhcC
Q 020013 154 LLPMVVDLIGDRDI------PIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEM 217 (332)
Q Consensus 154 ll~~i~~~~~~~~i------PviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~~~ 217 (332)
+++...+. ++ |++. |+.|+.++.+++.+|+|.|-+ +..+......|-+.+...
T Consensus 98 vi~~~~~~----~v~~~~~~~~~P--G~~TptE~~~A~~~Gad~vK~-----FPa~~~gG~~~lkal~~p 156 (217)
T 3lab_A 98 LIEKAKQV----KLDGQWQGVFLP--GVATASEVMIAAQAGITQLKC-----FPASAIGGAKLLKAWSGP 156 (217)
T ss_dssp HHHHHHHH----HHHCSCCCEEEE--EECSHHHHHHHHHTTCCEEEE-----TTTTTTTHHHHHHHHHTT
T ss_pred HHHHHHHc----CCCccCCCeEeC--CCCCHHHHHHHHHcCCCEEEE-----CccccccCHHHHHHHHhh
Confidence 45444442 57 8887 888999999999999999954 222322224565566553
No 188
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.93 E-value=0.078 Score=47.72 Aligned_cols=149 Identities=16% Similarity=0.187 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCcH--------HHHHHHHhCCCEEEE----
Q 020013 48 PDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSE--------ELVLEAHSAGVKVVP---- 115 (332)
Q Consensus 48 ~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~~--------~~i~~~~~~g~~v~~---- 115 (332)
.+.+...+..+.+..+.|+.+++=--. ..+.+..+++.|...|-+.....|. ++++.++..|+.|=.
T Consensus 59 ~~~~~~~v~~~a~~~~VPValHlDHg~-~~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~ 137 (286)
T 1gvf_A 59 LEEIYALCSAYSTTYNMPLALHLDHHE-SLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGR 137 (286)
T ss_dssp HHHHHHHHHHHHHHTTSCBEEEEEEEC-CHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHHHHhCCCcEEEEcCCCC-CHHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEee
Confidence 344555555554445677777653222 2567778888888888776333332 455666666665421
Q ss_pred ---------------ecCCHHHHHHHH-HcCCCEEEE-ecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeec--CcC
Q 020013 116 ---------------QVGSFDEARKAV-NAGVDAIIV-QGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAG--GIV 176 (332)
Q Consensus 116 ---------------~v~s~~~a~~a~-~~g~D~ivv-~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaG--GI~ 176 (332)
..++++++.... +.|+|.+-+ .|.-=|-..+.+.-.+.+|.++.+.+ ++|++.-| |+
T Consensus 138 vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~---~vpLVlHGgSG~- 213 (286)
T 1gvf_A 138 LGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVV---DVPLVLHGASDV- 213 (286)
T ss_dssp CC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHC---CSCEEECCCTTC-
T ss_pred ccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhc---CCCEEEECCCCC-
Confidence 126788888876 579998877 23321222212234588999999987 79999888 66
Q ss_pred CHHHHHHHHHcCcceeeeccccccC
Q 020013 177 DARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 177 ~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
..+++.+++.+|..-|=++|-+..+
T Consensus 214 ~~e~i~~ai~~Gv~KiNi~Tdl~~a 238 (286)
T 1gvf_A 214 PDEFVRRTIELGVTKVNVATELKIA 238 (286)
T ss_dssp CHHHHHHHHHTTEEEEEECHHHHHH
T ss_pred CHHHHHHHHHCCCeEEEEChHHHHH
Confidence 5677999999999999999886443
No 189
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.89 E-value=0.035 Score=48.26 Aligned_cols=106 Identities=19% Similarity=0.165 Sum_probs=64.8
Q ss_pred HHHHHhcCCcEEEEcc--C----CCcHHH---HHHHHh----CCCEEEEec--CCHHHHH----HHHHcCCCEEEEe-cC
Q 020013 80 IKAILSEKVAVLQVSW--G----EYSEEL---VLEAHS----AGVKVVPQV--GSFDEAR----KAVNAGVDAIIVQ-GR 139 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~--g----~~~~~~---i~~~~~----~g~~v~~~v--~s~~~a~----~a~~~g~D~ivv~-G~ 139 (332)
.+. ++.|++-|.+.. | .....+ ++.+++ ..+||+... -+.++.. .+.++|+|+|... |+
T Consensus 73 ~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf 151 (226)
T 1vcv_A 73 VSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGF 151 (226)
T ss_dssp HHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred HHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCC
Confidence 456 788999887642 1 111222 223332 345665432 2555433 3568899999873 55
Q ss_pred C----------CCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHc---Ccc
Q 020013 140 E----------AGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL---GAQ 190 (332)
Q Consensus 140 e----------aGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~---GA~ 190 (332)
. .||- ......++.++.+..+. ++||-++|||.+.+++.+++.+ ||+
T Consensus 152 ~~~~~~~~~~~~~gA---t~~dv~lm~~~i~~~g~-~v~vKaaGGirt~~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 152 AEEAYAARQGNPVHS---TPERAAAIARYIKEKGY-RLGVKMAGGIRTREQAKAIVDAIGWGED 211 (226)
T ss_dssp CCHHHHHHTTCCSSC---CHHHHHHHHHHHHHHTC-CCEEEEESSCCSHHHHHHHHHHHCSCSC
T ss_pred CccccccccCCCCCC---CHHHHHHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHCCCC
Confidence 3 2221 12334555555443532 6999999999999999999999 988
No 190
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=96.80 E-value=0.00032 Score=61.94 Aligned_cols=143 Identities=15% Similarity=0.193 Sum_probs=78.2
Q ss_pred HHHHHHhh-cCCcEEEEeecCCCC--HHHHHHHHhcCCcEEEEcc--CCC-cHHHHHHHHhC---CCE----EEEecC-C
Q 020013 54 LIRKTRSL-TERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSW--GEY-SEELVLEAHSA---GVK----VVPQVG-S 119 (332)
Q Consensus 54 ~i~~~r~~-~~~p~gvnl~~~~~~--~~~~~~~~~~~~~~I~~~~--g~~-~~~~i~~~~~~---g~~----v~~~v~-s 119 (332)
.++.+|+. +..++-+.++ ..+. ..+++.+.+.|+|.|.+|. |.. ....++.+++. |.+ +...+. +
T Consensus 46 ~v~~l~~~~~~v~lD~kl~-Dip~t~~~~~~~~~~~Gad~vtvH~~~g~~~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts 124 (239)
T 1dbt_A 46 IVKQLKERNCELFLDLKLH-DIPTTVNKAMKRLASLGVDLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAVTQLTS 124 (239)
T ss_dssp HHHHHHHTTCEEEEEEEEC-SCHHHHHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTT
T ss_pred HHHHHHHCCCcEEEEeccc-cchHHHHHHHHHHHhcCCCEEEEeCcCCHHHHHHHHHHHHhhhccCCCCccEEEEEEcCC
Confidence 34556655 3455666665 3331 1367778889999999984 221 12455666665 763 333332 2
Q ss_pred H--HHH-HHH-HHcC-CCEEEEe---cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH----------
Q 020013 120 F--DEA-RKA-VNAG-VDAIIVQ---GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY---------- 181 (332)
Q Consensus 120 ~--~~a-~~a-~~~g-~D~ivv~---G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v---------- 181 (332)
. +.. +.. .... +|.|..- ..+.|+... -.+. .-+.++++... +.+++.+||| ++++.
T Consensus 125 ~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~-v~~~-~~i~~lr~~~~--~~~i~v~gGI-~~~~~~~~dq~rv~t 199 (239)
T 1dbt_A 125 TSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGV-VCSV-HEAKAIYQAVS--PSFLTVTPGI-RMSEDAANDQVRVAT 199 (239)
T ss_dssp CCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEE-ECCG-GGHHHHTTTSC--TTCEEEECCB-CCTTSCCTTCSSCBC
T ss_pred CCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEE-EECH-HHHHHHHHhcC--CCcEEEeCCc-CCCCCCccceeccCC
Confidence 1 222 110 0000 1222111 122232210 0011 34455555442 4689999999 56776
Q ss_pred -HHHHHcCcceeeeccccccCc
Q 020013 182 -VAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 182 -~~al~~GA~gV~~GT~fl~t~ 202 (332)
.+++.+|||.+++|+.++.++
T Consensus 200 p~~a~~aGad~iVvGr~I~~a~ 221 (239)
T 1dbt_A 200 PAIAREKGSSAIVVGRSITKAE 221 (239)
T ss_dssp HHHHHHTTCSEEEECHHHHTSS
T ss_pred HHHHHHcCCCEEEEChhhcCCC
Confidence 889999999999999988753
No 191
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.64 E-value=0.091 Score=49.37 Aligned_cols=175 Identities=18% Similarity=0.190 Sum_probs=103.9
Q ss_pred cceecCCCCCCCCcHHHH----HHHHhCCCceeecCCCC-----------CCHHHHHHHHHHHHhhcCCcEEEEeecCCC
Q 020013 11 YGIVQAPLGPDISGPELV----AAVANAGGLGLLRAPDW-----------EAPDYLRDLIRKTRSLTERPFGVGVVLAFP 75 (332)
Q Consensus 11 ~Pii~apM~~g~s~~~la----~avs~aGglG~i~~~~~-----------~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~ 75 (332)
.++|.||.+ +.+.+.+ .++.++|. .++....| .+.+.+ +++.++++..+.|+..-++-
T Consensus 143 ~~~Iigpcs--ves~e~a~~~a~~~k~aGa-~~vk~q~fkprts~~~f~gl~~egl-~~L~~~~~~~Gl~~~te~~d--- 215 (385)
T 3nvt_A 143 PVFVFGPCS--VESYEQVAAVAESIKAKGL-KLIRGGAFKPRTSPYDFQGLGLEGL-KILKRVSDEYGLGVISEIVT--- 215 (385)
T ss_dssp CEEEEECSB--CCCHHHHHHHHHHHHHTTC-CEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHHTCEEEEECCS---
T ss_pred eEEEEEeCC--cCCHHHHHHHHHHHHHcCC-CeEEcccccCCCChHhhcCCCHHHH-HHHHHHHHHcCCEEEEecCC---
Confidence 367788875 6676555 44555664 23311111 233444 34455555556777665443
Q ss_pred CHHHHHHHHhcCCcEEEEccCC-CcHHHHHHHHhCCCEEEEec---CCHHHHHHHH----HcCC-CEEEEe-cCCC-Ccc
Q 020013 76 HNENIKAILSEKVAVLQVSWGE-YSEELVLEAHSAGVKVVPQV---GSFDEARKAV----NAGV-DAIIVQ-GREA-GGH 144 (332)
Q Consensus 76 ~~~~~~~~~~~~~~~I~~~~g~-~~~~~i~~~~~~g~~v~~~v---~s~~~a~~a~----~~g~-D~ivv~-G~ea-GGh 144 (332)
...++.+.+. +|++.++.+. ...++++.+.+.|.+|+.+- .++++...+. ..|. +.++++ |... -..
T Consensus 216 -~~~~~~l~~~-vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~ 293 (385)
T 3nvt_A 216 -PADIEVALDY-VDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKA 293 (385)
T ss_dssp -GGGHHHHTTT-CSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCS
T ss_pred -HHHHHHHHhh-CCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCC
Confidence 5667777777 9999997543 34467888888899998764 4777766554 4565 566665 3311 000
Q ss_pred cCCCCchhhhHHHHHHHhCCCCCcEEee--cCcCCH----HHHHHHHHcCcceeeecccc
Q 020013 145 VIGQDGLISLLPMVVDLIGDRDIPIIAA--GGIVDA----RGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 145 ~~~~~~~~~ll~~i~~~~~~~~iPviaa--GGI~~~----~~v~~al~~GA~gV~~GT~f 198 (332)
. -....+..++.+++.. ++||+.. =|+++. .-..++.++||+|+++=.-|
T Consensus 294 ~-~~~ldl~~i~~lk~~~---~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~ 349 (385)
T 3nvt_A 294 T-RNTLDISAVPILKKET---HLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHP 349 (385)
T ss_dssp S-SSBCCTTHHHHHHHHB---SSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred C-ccccCHHHHHHHHHhc---CCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecC
Confidence 0 1123466688887766 7899765 122111 22456889999999996644
No 192
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.61 E-value=0.0099 Score=52.78 Aligned_cols=73 Identities=21% Similarity=0.238 Sum_probs=57.4
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 120 FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
.+.|+.+++.|+++|-+-.-+ +.- .+....+..+++.+ ++||+.-++|.+..++..++.+|||+|.+|+..+
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~--~~f---~G~~~~l~~i~~~v---~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEP--HRF---GGSLLDLKRVREAV---DLPLLRKDFVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCC--SSS---CCCHHHHHHHHHHC---CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHHHHHHHcCCCEEEEecch--hhh---ccCHHHHHHHHHhc---CCCEEECCcCCCHHHHHHHHHcCCCEEEECccch
Confidence 566788889999999773211 110 12356777888877 8999999999999999999999999999999987
Q ss_pred c
Q 020013 200 A 200 (332)
Q Consensus 200 ~ 200 (332)
.
T Consensus 140 ~ 140 (254)
T 1vc4_A 140 G 140 (254)
T ss_dssp G
T ss_pred H
Confidence 5
No 193
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=96.50 E-value=0.063 Score=46.70 Aligned_cols=110 Identities=17% Similarity=0.150 Sum_probs=64.6
Q ss_pred HHHHHHHhcCCcEEEEccCCCcH---HHHHHHHhCCCEEEE--ecCCH-----------HHHHHHHHcCCCEEEEecCCC
Q 020013 78 ENIKAILSEKVAVLQVSWGEYSE---ELVLEAHSAGVKVVP--QVGSF-----------DEARKAVNAGVDAIIVQGREA 141 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~~~---~~i~~~~~~g~~v~~--~v~s~-----------~~a~~a~~~g~D~ivv~G~ea 141 (332)
.+++.+.+.|+|.|.+|.-.... ..++.+++.|..++. ..++. +-++.+.+.|+|++++..
T Consensus 82 ~~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a--- 158 (228)
T 3m47_A 82 KICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS--- 158 (228)
T ss_dssp HHHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS---
T ss_pred HHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC---
Confidence 36777888999999998422121 234445555655553 22322 124456788999988721
Q ss_pred CcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHH--HHHHHHHcCcceeeeccccccCc
Q 020013 142 GGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDAR--GYVAALSLGAQGICLGTRFVASE 202 (332)
Q Consensus 142 GGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~--~v~~al~~GA~gV~~GT~fl~t~ 202 (332)
+. ...++.+++..+. +.+ +..+||+ ++ +. +++..|||.+++|+.++.++
T Consensus 159 --t~------~~e~~~ir~~~~~-~~~-iv~PGI~-~~g~~p-~~~~aGad~iVvGr~I~~a~ 209 (228)
T 3m47_A 159 --TR------PERLSRLREIIGQ-DSF-LISPGVG-AQGGDP-GETLRFADAIIVGRSIYLAD 209 (228)
T ss_dssp --SC------HHHHHHHHHHHCS-SSE-EEECC-----------CGGGTCSEEEECHHHHTSS
T ss_pred --CC------hHHHHHHHHhcCC-CCE-EEecCcC-cCCCCH-hHHHcCCCEEEECHHHhCCC
Confidence 11 2344566666531 244 4788884 44 56 88899999999999987653
No 194
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=96.44 E-value=0.13 Score=45.98 Aligned_cols=144 Identities=15% Similarity=0.110 Sum_probs=91.0
Q ss_pred cceecCCCCCCCCcHHHHHHHHhCCCceee--c-------CC----CCCCHHHHHHHHHHHHhhcC-CcEEEEeec-CCC
Q 020013 11 YGIVQAPLGPDISGPELVAAVANAGGLGLL--R-------AP----DWEAPDYLRDLIRKTRSLTE-RPFGVGVVL-AFP 75 (332)
Q Consensus 11 ~Pii~apM~~g~s~~~la~avs~aGglG~i--~-------~~----~~~~~e~~~~~i~~~r~~~~-~p~gvnl~~-~~~ 75 (332)
-||+ |. +.-|...|..+.++|. ..| + .+ ...+.+++....+.++..++ .|+-+.+-. ...
T Consensus 29 ~~i~---m~-tayDa~sA~l~e~aG~-d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~ 103 (275)
T 3vav_A 29 EKIA---ML-TCYDASFAALLDRANV-DVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYG 103 (275)
T ss_dssp CCEE---EE-ECCSHHHHHHHHHTTC-SEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCS
T ss_pred CcEE---EE-eCcCHHHHHHHHHcCC-CEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCC
Confidence 4665 32 4668888888888873 222 1 11 12355666666666665553 455555533 112
Q ss_pred C-HH---HHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEec-----------------CCH-------HHHHHHH
Q 020013 76 H-NE---NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQV-----------------GSF-------DEARKAV 127 (332)
Q Consensus 76 ~-~~---~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v-----------------~s~-------~~a~~a~ 127 (332)
. ++ .+..+.++|++.|.+-.+..+.+.++.+.+.|++++..+ .+. ++++..+
T Consensus 104 s~~~a~~~a~rl~kaGa~aVklEdg~~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~ 183 (275)
T 3vav_A 104 TPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVE 183 (275)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCchhHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHH
Confidence 2 22 234456679999999756667889999999999997432 122 3344567
Q ss_pred HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeec
Q 020013 128 NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAG 173 (332)
Q Consensus 128 ~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaG 173 (332)
++|+|.|++++. +. .+..++.+.+ ++|+|..|
T Consensus 184 eAGA~~ivlE~v----------p~-~~a~~It~~l---~iP~igIG 215 (275)
T 3vav_A 184 EAGAQLIVLEAV----------PT-LVAAEVTREL---SIPTIGIG 215 (275)
T ss_dssp HHTCSEEEEESC----------CH-HHHHHHHHHC---SSCEEEES
T ss_pred HcCCCEEEecCC----------CH-HHHHHHHHhC---CCCEEEEc
Confidence 899999999754 22 2677888887 79999654
No 195
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.42 E-value=0.05 Score=47.24 Aligned_cols=118 Identities=13% Similarity=0.222 Sum_probs=77.5
Q ss_pred HHHHHHHhcCCcEEEEccCCC-cHHHHHHHHh-C-CCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhh
Q 020013 78 ENIKAILSEKVAVLQVSWGEY-SEELVLEAHS-A-GVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLIS 153 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~-~~~~i~~~~~-~-g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ 153 (332)
+.++.+++.|+++|++..-.+ ..+.++.+++ . .+.+.. .+.+.++++.+.+.|+|+|+. | + .+..
T Consensus 33 ~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~-----p-~-----~d~~ 101 (224)
T 1vhc_A 33 PLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVT-----P-G-----LNPK 101 (224)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEEC-----S-S-----CCHH
T ss_pred HHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEE-----C-C-----CCHH
Confidence 456778889999999975332 2355665544 2 344433 345789999999999999954 1 1 1233
Q ss_pred hHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHHHhcC
Q 020013 154 LLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEM 217 (332)
Q Consensus 154 ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~~~ 217 (332)
.+...++ . ++|++. |+.|+..+.+++.+|||-|.+ | ..+......+-+.+...
T Consensus 102 v~~~ar~-~---g~~~i~--Gv~t~~e~~~A~~~Gad~vk~---F--pa~~~gG~~~lk~l~~~ 154 (224)
T 1vhc_A 102 IVKLCQD-L---NFPITP--GVNNPMAIEIALEMGISAVKF---F--PAEASGGVKMIKALLGP 154 (224)
T ss_dssp HHHHHHH-T---TCCEEC--EECSHHHHHHHHHTTCCEEEE---T--TTTTTTHHHHHHHHHTT
T ss_pred HHHHHHH-h---CCCEEe--ccCCHHHHHHHHHCCCCEEEE---e--eCccccCHHHHHHHHhh
Confidence 4444444 4 678776 499999999999999999988 2 22322234555555553
No 196
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=96.40 E-value=0.3 Score=43.89 Aligned_cols=135 Identities=19% Similarity=0.201 Sum_probs=87.0
Q ss_pred cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCc--------HHHHHHHHhCCCEEEE-----------------e
Q 020013 62 TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS--------EELVLEAHSAGVKVVP-----------------Q 116 (332)
Q Consensus 62 ~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~--------~~~i~~~~~~g~~v~~-----------------~ 116 (332)
.+.|+.+++=--. +.+.+..+++.|...|-+.....| .++++.++..|+.|=. .
T Consensus 79 ~~VPValHlDHg~-~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~ 157 (288)
T 3q94_A 79 ITVPVAIHLDHGS-SFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVI 157 (288)
T ss_dssp CCSCEEEEEEEEC-SHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCB
T ss_pred CCCcEEEECCCCC-CHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCcccc
Confidence 4456666542211 245566666677776666533222 2455666777776531 1
Q ss_pred cCCHHHHHHHH-HcCCCEEEE-ecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcC-CHHHHHHHHHcCcceee
Q 020013 117 VGSFDEARKAV-NAGVDAIIV-QGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIV-DARGYVAALSLGAQGIC 193 (332)
Q Consensus 117 v~s~~~a~~a~-~~g~D~ivv-~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~-~~~~v~~al~~GA~gV~ 193 (332)
.++++++.... +.|+|.+-+ .|.-=|-..+.+.-.+.+|.++.+.+ ++|++.-||=+ ..+++.+++..|..-|=
T Consensus 158 yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v---~vpLVlHGgSG~~~e~i~~ai~~Gv~KiN 234 (288)
T 3q94_A 158 YADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT---GVPLVLHGGTGIPTADIEKAISLGTSKIN 234 (288)
T ss_dssp CCCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH---CSCEEECCCTTCCHHHHHHHHHTTEEEEE
T ss_pred CCCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc---CCCEEEeCCCCCCHHHHHHHHHcCCeEEE
Confidence 36789998876 579999877 23321222212234588999999988 79999876543 45679999999999999
Q ss_pred ecccccc
Q 020013 194 LGTRFVA 200 (332)
Q Consensus 194 ~GT~fl~ 200 (332)
++|-+..
T Consensus 235 i~Tdl~~ 241 (288)
T 3q94_A 235 VNTENQI 241 (288)
T ss_dssp ECHHHHH
T ss_pred EChHHHH
Confidence 9888643
No 197
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=96.36 E-value=0.23 Score=45.30 Aligned_cols=144 Identities=24% Similarity=0.298 Sum_probs=87.5
Q ss_pred HHHHHHHHHhh-cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCc--------HHHHHHHHhCCCEEEE------
Q 020013 51 LRDLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS--------EELVLEAHSAGVKVVP------ 115 (332)
Q Consensus 51 ~~~~i~~~r~~-~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~--------~~~i~~~~~~g~~v~~------ 115 (332)
+...+....+. .+.|+.+++=-- ...+.+..+++.|...|-+.....| .++++.++..|+.|=.
T Consensus 62 ~~~~v~~aa~~~~~VPValHlDHg-~~~e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vg 140 (323)
T 2isw_A 62 LKKLCEAALEKHPDIPICIHLDHG-DTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTLG 140 (323)
T ss_dssp HHHHHHHHHHHCTTSCEEEEEEEE-CSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC-
T ss_pred HHHHHHHHHHhcCCCcEEEECCCC-CCHHHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCcc
Confidence 33344433333 445666554221 1245667777777777766533222 2455666666765521
Q ss_pred ----------ecCCHHHHHHHH-HcCCCEEEE-ecCCCCccc--CCCC--chhhhHHHHHHHhCCCCCcEEeec------
Q 020013 116 ----------QVGSFDEARKAV-NAGVDAIIV-QGREAGGHV--IGQD--GLISLLPMVVDLIGDRDIPIIAAG------ 173 (332)
Q Consensus 116 ----------~v~s~~~a~~a~-~~g~D~ivv-~G~eaGGh~--~~~~--~~~~ll~~i~~~~~~~~iPviaaG------ 173 (332)
..++++++.... +.|+|.+-+ .|.-=|-.. +.+. -.+.+|.++.+.+ ++|++.-|
T Consensus 141 g~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~---~vpLVlHGgSsvp~ 217 (323)
T 2isw_A 141 GIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT---GIPLVMHGSSSVPK 217 (323)
T ss_dssp ---------CCCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH---CSCEEECSCCCCCH
T ss_pred CCccCcccccccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHh---CCCeEEECCCCCCH
Confidence 126788888876 579998877 233222221 1122 3478899999988 79999999
Q ss_pred -----------------CcCCHHHHHHHHHcCcceeeeccccc
Q 020013 174 -----------------GIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 174 -----------------GI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
|+ ..+++.+++.+|..-|=++|-+-
T Consensus 218 ~~~~~~~~~gg~~~~~~Gv-p~e~i~~ai~~GV~KiNi~Tdl~ 259 (323)
T 2isw_A 218 DVKDMINKYGGKMPDAVGV-PIESIVHAIGEGVCKINVDSDSR 259 (323)
T ss_dssp HHHHHHHHTTCCCTTCBCC-CHHHHHHHHHTTEEEEEECHHHH
T ss_pred HHHHHHHHhccccccCCCC-CHHHHHHHHHCCCeEEEEChHHH
Confidence 77 56778888888877777777654
No 198
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.33 E-value=0.034 Score=51.37 Aligned_cols=88 Identities=14% Similarity=0.200 Sum_probs=60.8
Q ss_pred HHHHHHHHhCCCEEEEecCC-H---HHHHHHHHcC--CCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeec
Q 020013 100 EELVLEAHSAGVKVVPQVGS-F---DEARKAVNAG--VDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAG 173 (332)
Q Consensus 100 ~~~i~~~~~~g~~v~~~v~s-~---~~a~~a~~~g--~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaG 173 (332)
.++++++++.+.++...+.. . +.++.+.+.| +|+|.+... .| .....+..+..+++.. +.|++..|
T Consensus 84 ~~~i~~~~~~g~~v~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~--~G---~~~~~~~~i~~lr~~~---~~~~vi~G 155 (336)
T 1ypf_A 84 ISFIRDMQSRGLIASISVGVKEDEYEFVQQLAAEHLTPEYITIDIA--HG---HSNAVINMIQHIKKHL---PESFVIAG 155 (336)
T ss_dssp HHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTCCCSEEEEECS--SC---CSHHHHHHHHHHHHHC---TTSEEEEE
T ss_pred HHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHhcCCCCCEEEEECC--CC---CcHHHHHHHHHHHHhC---CCCEEEEC
Confidence 35566666677666655542 3 3455667888 999877432 12 2234577888888876 33455567
Q ss_pred CcCCHHHHHHHHHcCcceeeec
Q 020013 174 GIVDARGYVAALSLGAQGICLG 195 (332)
Q Consensus 174 GI~~~~~v~~al~~GA~gV~~G 195 (332)
+|.+.+++..+..+|||+|.++
T Consensus 156 ~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 156 NVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp EECSHHHHHHHHHHTCSEEEEC
T ss_pred CcCCHHHHHHHHHcCCCEEEEe
Confidence 6889999999999999999994
No 199
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.26 E-value=0.011 Score=53.09 Aligned_cols=73 Identities=18% Similarity=0.156 Sum_probs=55.5
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 120 FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
.+.|+..++.|+++|-+---+ + + -.+.+..+.++++.+ ++||+.-+.|-|..++.++..+|||+|.++.+.+
T Consensus 75 ~~~A~~y~~~GA~~isvltd~-~-~---f~Gs~~~l~~ir~~v---~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l 146 (272)
T 3qja_A 75 AKLAQAYQDGGARIVSVVTEQ-R-R---FQGSLDDLDAVRASV---SIPVLRKDFVVQPYQIHEARAHGADMLLLIVAAL 146 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCG-G-G---HHHHHHHHHHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGS
T ss_pred HHHHHHHHHcCCCEEEEecCh-h-h---cCCCHHHHHHHHHhC---CCCEEECccccCHHHHHHHHHcCCCEEEEecccC
Confidence 345677778999999773110 0 0 013466788888877 7999999988899899999999999999998866
Q ss_pred c
Q 020013 200 A 200 (332)
Q Consensus 200 ~ 200 (332)
.
T Consensus 147 ~ 147 (272)
T 3qja_A 147 E 147 (272)
T ss_dssp C
T ss_pred C
Confidence 4
No 200
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.23 E-value=0.0094 Score=57.98 Aligned_cols=180 Identities=18% Similarity=0.313 Sum_probs=103.1
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcC----CcEEE----------
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTE----RPFGV---------- 68 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~----~p~gv---------- 68 (332)
+++.+.++.|||.+||. .++.++||.++++.||+|+|.- + +++|+-.++++++|..-. .|+-+
T Consensus 85 lt~~i~L~iPlvSA~MD-TVTe~~MAIamAr~GGiGvIH~-n-~sie~Qa~~V~~VKr~e~g~i~dPvtl~P~~Tv~da~ 161 (556)
T 4af0_A 85 ATKNIVLNTPFLSSPMD-TVTEDRMAIALALHGGLGIIHH-N-CSAEEQAAMVRRVKKYENGFITDPLCLGPDATVGDVL 161 (556)
T ss_dssp EETTEEESSCEEECCCT-TTCSHHHHHHHHHTTCEEEECC-S-SCHHHHHHHHHHHHHCCC-------------------
T ss_pred ccCCcEeCCCEEecCcc-cccCHHHHHHHHHCCCeEEEcC-C-CCHHHHHHHHHHHHhcccCccCCCeEcCCCCCHHHHH
Confidence 44666788899999998 7999999999999999999986 3 688887888888875311 12111
Q ss_pred ------------------------EeecCCCC-----HHHHHHHHhcCCcEEEEccCCCcHHHHHHHHhC----------
Q 020013 69 ------------------------GVVLAFPH-----NENIKAILSEKVAVLQVSWGEYSEELVLEAHSA---------- 109 (332)
Q Consensus 69 ------------------------nl~~~~~~-----~~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~---------- 109 (332)
+++.+.+. ...+..+.. .+.|....+..+.+..+.+++.
T Consensus 162 ~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~d~~~~V~evMT--~~lvt~~~~~~leeA~~iL~~~kieklpVVd~ 239 (556)
T 4af0_A 162 EIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMT--TEVVTGSSPITLEKANSLLRETKKGKLPIVDS 239 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCccccccccCcCCEEEEEEecccccccccceEhhhhcc--cceEEecCCCCHHHHHHHHHHccccceeEEcc
Confidence 01100000 000000000 0112111111111111111111
Q ss_pred ----------------------------C-CEEEEecC----CHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHH
Q 020013 110 ----------------------------G-VKVVPQVG----SFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLP 156 (332)
Q Consensus 110 ----------------------------g-~~v~~~v~----s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~ 156 (332)
| ..|...|+ ..+.+..+.++|+|+|+++... ||. ...+..++
T Consensus 240 ~g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ah--Ghs---~~v~~~i~ 314 (556)
T 4af0_A 240 NGHLVSLVARSDLLKNQNYPYASKVPESKQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQ--GNS---VYQIEFIK 314 (556)
T ss_dssp ------------------CTTCCBCTTTCCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSC--CCS---HHHHHHHH
T ss_pred CCcEEEEEEechhhhhhhCCcchhcchhhceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccc--ccc---HHHHHHHH
Confidence 0 12233333 2344566789999999997652 443 34577888
Q ss_pred HHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeec
Q 020013 157 MVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 195 (332)
Q Consensus 157 ~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~G 195 (332)
.+++..+ ++||| +|.|.|++.+..++.+|||+|-+|
T Consensus 315 ~ik~~~p--~~~vi-aGNVaT~e~a~~Li~aGAD~vkVG 350 (556)
T 4af0_A 315 WIKQTYP--KIDVI-AGNVVTREQAAQLIAAGADGLRIG 350 (556)
T ss_dssp HHHHHCT--TSEEE-EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHhhCC--cceEE-eccccCHHHHHHHHHcCCCEEeec
Confidence 8888764 56665 588999999999999999999775
No 201
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=96.23 E-value=0.27 Score=43.78 Aligned_cols=146 Identities=14% Similarity=0.161 Sum_probs=90.6
Q ss_pred cceecCCCCCCCCcHHHHHHHHhCCCceee-c-------CC----CCCCHHHHHHHHHHHHhhcCCcEE-EEeec-CC--
Q 020013 11 YGIVQAPLGPDISGPELVAAVANAGGLGLL-R-------AP----DWEAPDYLRDLIRKTRSLTERPFG-VGVVL-AF-- 74 (332)
Q Consensus 11 ~Pii~apM~~g~s~~~la~avs~aGglG~i-~-------~~----~~~~~e~~~~~i~~~r~~~~~p~g-vnl~~-~~-- 74 (332)
-||+ |. +.-|...|..+.++|.=-++ + .+ ...+.+++....+.++..++.|+- +.+-. ..
T Consensus 17 ~~i~---~~-tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~ 92 (275)
T 1o66_A 17 EKIA---ML-TAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQ 92 (275)
T ss_dssp CCEE---EE-ECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSS
T ss_pred CcEE---EE-eCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccC
Confidence 4665 32 46788888888888731111 1 11 123567776667777666665543 44322 11
Q ss_pred CCHHHH---HHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEecC-----------------C------HHHHHHHHH
Q 020013 75 PHNENI---KAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVG-----------------S------FDEARKAVN 128 (332)
Q Consensus 75 ~~~~~~---~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v~-----------------s------~~~a~~a~~ 128 (332)
..++.+ ..+.+.|++.|.+-.|..-.+.++.+.+.|++|+..++ + .++|+..++
T Consensus 93 s~~~a~~na~rl~kaGa~aVklEdg~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~e 172 (275)
T 1o66_A 93 SKEQAFAAAAELMAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDD 172 (275)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECSGGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCcHHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHH
Confidence 112223 35666899999986454456788888899998873221 1 224456678
Q ss_pred cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecC
Q 020013 129 AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGG 174 (332)
Q Consensus 129 ~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGG 174 (332)
+|||.|++++. + ..+..++.+.+ ++|+|..|.
T Consensus 173 AGA~~ivlE~v----------p-~~~a~~it~~l---~iP~igIGa 204 (275)
T 1o66_A 173 AGAAVVLMECV----------L-AELAKKVTETV---SCPTIGIGA 204 (275)
T ss_dssp TTCSEEEEESC----------C-HHHHHHHHHHC---SSCEEEESS
T ss_pred cCCcEEEEecC----------C-HHHHHHHHHhC---CCCEEEECC
Confidence 99999999753 1 24677888887 799997553
No 202
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=96.21 E-value=0.0084 Score=52.52 Aligned_cols=110 Identities=21% Similarity=0.282 Sum_probs=68.2
Q ss_pred HHHHHHhcCCcEEEEc--cCCCcHHHH-------HHHHhCCCEE--EEec--CCHHHH----HHHHHcCCCEEEEe-cCC
Q 020013 79 NIKAILSEKVAVLQVS--WGEYSEELV-------LEAHSAGVKV--VPQV--GSFDEA----RKAVNAGVDAIIVQ-GRE 140 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~--~g~~~~~~i-------~~~~~~g~~v--~~~v--~s~~~a----~~a~~~g~D~ivv~-G~e 140 (332)
..+.+++.|+|-|.+. .|.....+. +.+++.|+++ +... .+.++. +.+.++|+|+|... |+.
T Consensus 93 e~~~Av~~GAdEID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ria~eaGADfVKTsTG~~ 172 (234)
T 1n7k_A 93 EAQTVLEAGATELDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDSSRRAGADIVKTSTGVY 172 (234)
T ss_dssp HHHHHHHHTCCEEEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHHHHHTTCSEEESCCSSS
T ss_pred HHHHHHHcCCCEEEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 3567788899999875 343222222 2233445653 4322 244543 34578999999863 342
Q ss_pred C-CcccCCCCchhhhHHH--HHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcc--eeeeccc
Q 020013 141 A-GGHVIGQDGLISLLPM--VVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQ--GICLGTR 197 (332)
Q Consensus 141 a-GGh~~~~~~~~~ll~~--i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~--gV~~GT~ 197 (332)
. +| .+..-+.. +++.+ ++||.++|||.+.+++.+++.+||+ |+-.|..
T Consensus 173 ~~~g------At~~dv~l~~m~~~v---~v~VKaaGGirt~~~al~~i~aGa~RiG~S~g~~ 225 (234)
T 1n7k_A 173 TKGG------DPVTVFRLASLAKPL---GMGVKASGGIRSGIDAVLAVGAGADIIGTSSAVK 225 (234)
T ss_dssp CCCC------SHHHHHHHHHHHGGG---TCEEEEESSCCSHHHHHHHHHTTCSEEEETTHHH
T ss_pred CCCC------CCHHHHHHHHHHHHH---CCCEEEecCCCCHHHHHHHHHcCccccchHHHHH
Confidence 2 22 23333334 56656 3899999999999999999999999 5544443
No 203
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.18 E-value=0.11 Score=48.42 Aligned_cols=101 Identities=22% Similarity=0.405 Sum_probs=66.0
Q ss_pred hcCCcEEEEccCCCcHHH---HHHHHhCC-CEEEEec----CCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHH
Q 020013 85 SEKVAVLQVSWGEYSEEL---VLEAHSAG-VKVVPQV----GSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLP 156 (332)
Q Consensus 85 ~~~~~~I~~~~g~~~~~~---i~~~~~~g-~~v~~~v----~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~ 156 (332)
+-+.-++..+ ..++++ ++.+++.+ ..+...+ ...+.+..+.++|+|+|+++.. .||. ......++
T Consensus 69 aGGlg~i~~~--~s~e~~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta--~G~~---~~~~~~I~ 141 (366)
T 4fo4_A 69 EGGIGFIHKN--MSIEQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSS--HGHS---EGVLQRIR 141 (366)
T ss_dssp TTCEEEECSS--SCHHHHHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECS--CTTS---HHHHHHHH
T ss_pred cCCceEeecC--CCHHHHHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCC--CCCC---HHHHHHHH
Confidence 3455555433 334444 44555432 2333333 3467888899999999998632 3332 23455677
Q ss_pred HHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeec
Q 020013 157 MVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 195 (332)
Q Consensus 157 ~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~G 195 (332)
++++..+ ++||++ |.+.+.+.+.++..+|||+|.+|
T Consensus 142 ~ik~~~p--~v~Vi~-G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 142 ETRAAYP--HLEIIG-GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHCT--TCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHhcC--CCceEe-eeeCCHHHHHHHHHcCCCEEEEe
Confidence 7777653 577766 66789999999999999999995
No 204
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.17 E-value=0.009 Score=59.12 Aligned_cols=78 Identities=19% Similarity=0.262 Sum_probs=55.9
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCcc-cCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCH-----------HHHHHHHHc
Q 020013 120 FDEARKAVNAGVDAIIVQGREAGGH-VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDA-----------RGYVAALSL 187 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv~G~eaGGh-~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~-----------~~v~~al~~ 187 (332)
++.|+...+.|+|.+.+-.-.+.-. .........++.++.+.+ .+||+..|||.+. +++.+++.+
T Consensus 283 ~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~---~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~a 359 (555)
T 1jvn_A 283 VQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV---FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRS 359 (555)
T ss_dssp HHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC---CSCEEEESSCSCEECTTCCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC---CCcEEEeCccccchhcccccchHHHHHHHHHHc
Confidence 3456777788999998754432110 001123466777776655 7999999999998 559999999
Q ss_pred Ccceeeecccccc
Q 020013 188 GAQGICLGTRFVA 200 (332)
Q Consensus 188 GA~gV~~GT~fl~ 200 (332)
|||.|.+||..+.
T Consensus 360 Gad~V~igt~~~~ 372 (555)
T 1jvn_A 360 GADKVSIGTDAVY 372 (555)
T ss_dssp TCSEEEECHHHHH
T ss_pred CCCEEEECCHHhh
Confidence 9999999999864
No 205
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.14 E-value=0.17 Score=43.55 Aligned_cols=118 Identities=18% Similarity=0.173 Sum_probs=76.3
Q ss_pred HHHHHHHhcCCcEEEEccCCC-cHHHHHHHHh-C-CCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhh
Q 020013 78 ENIKAILSEKVAVLQVSWGEY-SEELVLEAHS-A-GVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLIS 153 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~-~~~~i~~~~~-~-g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ 153 (332)
+.++.+++.|+++|++..-.+ ..+.++.+++ . .+.+. ..+.+.++++.+.+.|+|+|+. | +. +..
T Consensus 32 ~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~-----p-~~-----d~~ 100 (214)
T 1wbh_A 32 PMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAIS-----P-GL-----TEP 100 (214)
T ss_dssp HHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEE-----S-SC-----CHH
T ss_pred HHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEc-----C-CC-----CHH
Confidence 457778888999999975332 2355665543 2 33333 3456779999999999999975 2 21 122
Q ss_pred hHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHHHhcC
Q 020013 154 LLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEM 217 (332)
Q Consensus 154 ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~~~ 217 (332)
.+.. +... ++|++. |+.|+..+.+++.+|||-|.+ | ..+......+-+.+...
T Consensus 101 v~~~-~~~~---g~~~i~--G~~t~~e~~~A~~~Gad~v~~---F--pa~~~gG~~~lk~i~~~ 153 (214)
T 1wbh_A 101 LLKA-ATEG---TIPLIP--GISTVSELMLGMDYGLKEFKF---F--PAEANGGVKALQAIAGP 153 (214)
T ss_dssp HHHH-HHHS---SSCEEE--EESSHHHHHHHHHTTCCEEEE---T--TTTTTTHHHHHHHHHTT
T ss_pred HHHH-HHHh---CCCEEE--ecCCHHHHHHHHHCCCCEEEE---e--cCccccCHHHHHHHhhh
Confidence 3322 3333 678876 499999999999999999988 2 22332224555555543
No 206
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=96.11 E-value=0.025 Score=48.83 Aligned_cols=133 Identities=12% Similarity=0.005 Sum_probs=77.7
Q ss_pred HHHHHhhcCCcEEEEeecCCCC---HHHHHHHHhcCCcEEEEccCCCcHHHHHHHH-hCCCEEEEecCC--------HHH
Q 020013 55 IRKTRSLTERPFGVGVVLAFPH---NENIKAILSEKVAVLQVSWGEYSEELVLEAH-SAGVKVVPQVGS--------FDE 122 (332)
Q Consensus 55 i~~~r~~~~~p~gvnl~~~~~~---~~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~-~~g~~v~~~v~s--------~~~ 122 (332)
++.+++..+.++-..+-..+-. ....+.+.+. +|++.+|.-.-..+.++.+. ..++.++...++ .+-
T Consensus 42 v~~L~~~~g~~VflDlK~~DIpnTv~~a~~~~~~~-ad~vTvh~~~G~~~~~~~~~~~~~v~vLts~s~~~~~~~~v~~~ 120 (215)
T 3ve9_A 42 VKELVGLVDGIKILDLKLADIDNTMILIVDELKDI-TNSFIAHAFVGVEGSLASLSQRVDLFLVLSMSHPGWNDAFYPYL 120 (215)
T ss_dssp HHHHHTTCCSEEEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEGGGCTTTTHHHHHHHSEEEEECCCSSTTCCGGGHHHH
T ss_pred HHHHHHhcCCcEEEEecccCchhHHHHHHHHHHHh-hheEEEeCCCCcHHHHHhHhcCCCEEEEEecCCcchHHHHHHHH
Confidence 4555543244554444433211 2234566677 99999873111012333331 223333322222 335
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHH--HHHHHHHcCcceeeecccccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDAR--GYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~--~v~~al~~GA~gV~~GT~fl~ 200 (332)
++.+.++|+|++|+.+ +. ..-++.+++..+ + .++..+||+ ++ +..+++..|+|-+++|+.+..
T Consensus 121 a~~a~~~G~~GvV~sa-----t~------~~e~~~ir~~~~--~-f~~v~pGI~-~~g~~~~~a~~~Gad~iVvGr~I~~ 185 (215)
T 3ve9_A 121 REVARRVNPKGFVAPA-----TR------PSMISRVKGDFP--D-KLVISPGVG-TQGAKPGIALCHGADYEIVGRSVYQ 185 (215)
T ss_dssp HHHHHHHCCSEEECCT-----TS------HHHHHHHHHHCT--T-SEEEECCTT-STTCCTTHHHHTTCSEEEECHHHHT
T ss_pred HHHHHHcCCCceeeCC-----CC------HHHHHHHHHhCC--C-cEEEcCCCC-cCcCCHHHHHHcCCCEEEeCHHHcC
Confidence 6677889999998722 21 223456666553 5 788899994 56 788899999999999999988
Q ss_pred Ccc
Q 020013 201 SEE 203 (332)
Q Consensus 201 t~E 203 (332)
++.
T Consensus 186 a~d 188 (215)
T 3ve9_A 186 SAD 188 (215)
T ss_dssp SSS
T ss_pred CCC
Confidence 754
No 207
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=96.07 E-value=0.25 Score=44.85 Aligned_cols=168 Identities=18% Similarity=0.191 Sum_probs=102.7
Q ss_pred CCCcHHHHHHHHhCCCceee----------cCC--CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCC----HHHHHHHH
Q 020013 21 DISGPELVAAVANAGGLGLL----------RAP--DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH----NENIKAIL 84 (332)
Q Consensus 21 g~s~~~la~avs~aGglG~i----------~~~--~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~----~~~~~~~~ 84 (332)
+.-+.-.+..+.++|.=.++ +.+ ...+.+++...++.+...++.|+-+.+-.-... .+.++.+.
T Consensus 35 ~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~ 114 (305)
T 3ih1_A 35 GAHDAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMV 114 (305)
T ss_dssp BCSSHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHH
Confidence 46677778877777632111 111 124566666667777666677876654322111 23456677
Q ss_pred hcCCcEEEEccCC--------------CcHHHHHHH---HhC--CCEEEEecCC-----H----HHHHHHHHcCCCEEEE
Q 020013 85 SEKVAVLQVSWGE--------------YSEELVLEA---HSA--GVKVVPQVGS-----F----DEARKAVNAGVDAIIV 136 (332)
Q Consensus 85 ~~~~~~I~~~~g~--------------~~~~~i~~~---~~~--g~~v~~~v~s-----~----~~a~~a~~~g~D~ivv 136 (332)
+.|+..|.+--+. +..+.++++ +++ +..|+.-... . +.++...++|+|.|++
T Consensus 115 ~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~ 194 (305)
T 3ih1_A 115 EAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFP 194 (305)
T ss_dssp HTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEE
Confidence 8999999874221 123455544 333 4556655443 2 3445567899999999
Q ss_pred ecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe---ecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 137 QGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA---AGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 137 ~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia---aGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
++. .+...+.++.+.+ ++|+++ .+|-...-+..+.-++|..-|..|...+.+
T Consensus 195 e~~----------~~~~~~~~i~~~~---~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ra 249 (305)
T 3ih1_A 195 EAL----------QSEEEFRLFNSKV---NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRV 249 (305)
T ss_dssp TTC----------CSHHHHHHHHHHS---CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHH
T ss_pred cCC----------CCHHHHHHHHHHc---CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 543 2356778888887 689864 455432235667778999999999776654
No 208
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.02 E-value=0.14 Score=43.76 Aligned_cols=101 Identities=19% Similarity=0.235 Sum_probs=70.0
Q ss_pred HHHHHHHHhcCCcEEEEccCCC-cHHHHHHHHhCCCEEEE-ecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhh
Q 020013 77 NENIKAILSEKVAVLQVSWGEY-SEELVLEAHSAGVKVVP-QVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISL 154 (332)
Q Consensus 77 ~~~~~~~~~~~~~~I~~~~g~~-~~~~i~~~~~~g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~l 154 (332)
.+.++.+.+.|+++|++..-.+ ..+.++.+++..+.+.. .+.+.++++.+.+.|+|+++. + + .+...
T Consensus 28 ~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~vl~~d~~~~A~~~GAd~v~~-----~-~-----~d~~v 96 (207)
T 2yw3_A 28 LGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGTVRSPKEAEAALEAGAAFLVS-----P-G-----LLEEV 96 (207)
T ss_dssp HHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEESCCSHHHHHHHHHHTCSEEEE-----S-S-----CCHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCeEeeHHHHHHHHHcCCCEEEc-----C-C-----CCHHH
Confidence 4567778888999999975432 23556666663333332 344678999999999999964 1 1 11333
Q ss_pred HHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeee
Q 020013 155 LPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 155 l~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~ 194 (332)
+...++ . ++|++. |+.|++++.++..+|||.|.+
T Consensus 97 ~~~~~~-~---g~~~i~--G~~t~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 97 AALAQA-R---GVPYLP--GVLTPTEVERALALGLSALKF 130 (207)
T ss_dssp HHHHHH-H---TCCEEE--EECSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHH-h---CCCEEe--cCCCHHHHHHHHHCCCCEEEE
Confidence 443333 4 678776 488999999999999999987
No 209
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=95.98 E-value=0.76 Score=41.57 Aligned_cols=131 Identities=18% Similarity=0.168 Sum_probs=77.6
Q ss_pred HHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCc--------HHHHHHHHhCCCEEEE------
Q 020013 50 YLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS--------EELVLEAHSAGVKVVP------ 115 (332)
Q Consensus 50 ~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~--------~~~i~~~~~~g~~v~~------ 115 (332)
.+...+..+.+ .+.|+.+++=--. ..+.+..+++.|...|-+.....| .++++.++..|+.|=.
T Consensus 60 ~~~~~v~~~a~-~~VPValHlDHg~-~~e~~~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vg 137 (305)
T 1rvg_A 60 LTLMAVELAKE-ARVPVAVHLDHGS-SYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLA 137 (305)
T ss_dssp HHHHHHHHHHH-CSSCEEEEEEEEC-SHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred HHHHHHHHHHh-CCCcEEEECCCCC-CHHHHHHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeecc
Confidence 34444444444 5667777653222 256677777888888777533333 2455666766665421
Q ss_pred -------------ecCCHHHHHHHH-HcCCCEEEE-ecCCCCccc--CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCH
Q 020013 116 -------------QVGSFDEARKAV-NAGVDAIIV-QGREAGGHV--IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDA 178 (332)
Q Consensus 116 -------------~v~s~~~a~~a~-~~g~D~ivv-~G~eaGGh~--~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~ 178 (332)
..++++++.... +.|+|.+-+ .|.-=|-.. +.+.-.+.+|.++.+.+ ++|++.-||=+-+
T Consensus 138 g~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~---~vpLVlHGgSsv~ 214 (305)
T 1rvg_A 138 GIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLV---PAPLVLHGASAVP 214 (305)
T ss_dssp CSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHC---CSCEEECSCCCCC
T ss_pred CccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhc---CCCEEEeCCCCCc
Confidence 126788888876 479998877 333222221 11234588899999988 7999999855333
Q ss_pred HHHHHHH
Q 020013 179 RGYVAAL 185 (332)
Q Consensus 179 ~~v~~al 185 (332)
.+..+.+
T Consensus 215 ~~~~~~~ 221 (305)
T 1rvg_A 215 PELVERF 221 (305)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 210
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=95.97 E-value=0.36 Score=43.51 Aligned_cols=175 Identities=18% Similarity=0.249 Sum_probs=97.7
Q ss_pred cceecCCCCCCCCcHHHHHHHH----hCC---CceeecCCCC-----CCH--------HHHHHHHHHHHhhcCCcEEEEe
Q 020013 11 YGIVQAPLGPDISGPELVAAVA----NAG---GLGLLRAPDW-----EAP--------DYLRDLIRKTRSLTERPFGVGV 70 (332)
Q Consensus 11 ~Pii~apM~~g~s~~~la~avs----~aG---glG~i~~~~~-----~~~--------e~~~~~i~~~r~~~~~p~gvnl 70 (332)
.-+|.+|-+ +.+++.+..++ ++| +++.+.-.++ .++ ++=.++++++++..+.|+..-+
T Consensus 42 l~vIaGPCs--ies~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~GLpv~Tev 119 (298)
T 3fs2_A 42 LALIAGPCQ--METRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEYGFPVLTDI 119 (298)
T ss_dssp CEEEEECSB--CCCHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred eEEEEeCCc--CCCHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEe
Confidence 347778875 66765544443 333 3444432211 122 1222344555545566666554
Q ss_pred ecCCCCHHHHHHHHhcCCcEEEEccC-CCcHHHHHHHHhCCCEEEEecC---CHHHHHHH----HHcCCC-EEEEe-cCC
Q 020013 71 VLAFPHNENIKAILSEKVAVLQVSWG-EYSEELVLEAHSAGVKVVPQVG---SFDEARKA----VNAGVD-AIIVQ-GRE 140 (332)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~I~~~~g-~~~~~~i~~~~~~g~~v~~~v~---s~~~a~~a----~~~g~D-~ivv~-G~e 140 (332)
+ +.+.++.+.+. +|+++++.. ....++++.+-+.+.+|+.+-+ +++|...+ .+.|.+ .++++ |..
T Consensus 120 ~----D~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~va~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~ 194 (298)
T 3fs2_A 120 H----TEEQCAAVAPV-VDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVS 194 (298)
T ss_dssp C----SHHHHHHHTTT-CSEEEECGGGTTCHHHHHHHHHTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEE
T ss_pred C----CHHHHHHHHhh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 3 36677777777 999999743 2344677777788999987654 55554433 345655 44443 332
Q ss_pred CCcccCCCCchhhhHHHHHHHhCCCCCcEEee---------------cCcCC--HHHHHHHHHcCcceeeecccc
Q 020013 141 AGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA---------------GGIVD--ARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 141 aGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa---------------GGI~~--~~~v~~al~~GA~gV~~GT~f 198 (332)
. +.. .....+..++.+++ . ++||+.. +|... ..-..++.++||||+++=+-|
T Consensus 195 y-~~~-~~~vdl~~i~~lk~-~---~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~ 263 (298)
T 3fs2_A 195 F-GYN-TLVSDMRALPIMAG-L---GAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHE 263 (298)
T ss_dssp C-SSS-CEECCTTHHHHHHT-T---TSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEES
T ss_pred C-CCC-CCccCHHHHHHHHH-c---CCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecC
Confidence 2 111 11134677888776 5 7999883 33211 123457889999999985443
No 211
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.95 E-value=0.0065 Score=54.16 Aligned_cols=71 Identities=13% Similarity=-0.016 Sum_probs=54.9
Q ss_pred CCH-HHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecc
Q 020013 118 GSF-DEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 196 (332)
Q Consensus 118 ~s~-~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT 196 (332)
.++ +.|+...+.|+|.+.+---.+ .....+.++.+.+ .+|+...|||.+. ++.+++ +||+-|.+||
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvDL~~--------~n~~~i~~i~~~~---~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs 104 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIKLGP--------NNDDAAREALQES---PQFLQVGGGINDT-NCLEWL-KWASKVIVTS 104 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEEESS--------SCHHHHHHHHHHS---TTTSEEESSCCTT-THHHHT-TTCSCEEECG
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCC--------CCHHHHHHHHhcC---CceEEEeCCCCHH-HHHHHh-cCCCEEEECc
Confidence 444 556777888999877632221 2256677887776 7999999999875 999999 9999999999
Q ss_pred ccccC
Q 020013 197 RFVAS 201 (332)
Q Consensus 197 ~fl~t 201 (332)
..+..
T Consensus 105 ~a~~~ 109 (260)
T 2agk_A 105 WLFTK 109 (260)
T ss_dssp GGBCT
T ss_pred HHHhh
Confidence 98865
No 212
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=95.93 E-value=0.04 Score=50.63 Aligned_cols=118 Identities=17% Similarity=0.238 Sum_probs=69.2
Q ss_pred HHHHHhcCCcEEEEc--cCCC-cH-----------HHHHHHHhCCCEEEEec----------CC----------HHH-HH
Q 020013 80 IKAILSEKVAVLQVS--WGEY-SE-----------ELVLEAHSAGVKVVPQV----------GS----------FDE-AR 124 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~--~g~~-~~-----------~~i~~~~~~g~~v~~~v----------~s----------~~~-a~ 124 (332)
++.+++.|+|+|.++ ++.+ +. ++.+.+++.|++++..+ .+ +.+ ++
T Consensus 116 ve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R 195 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMK 195 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHH
Confidence 677889999998764 3321 21 12234566799877532 12 212 23
Q ss_pred HH--HHcCCCEEEEecCCC----CcccCCC-----CchhhhHHHHHHHhCCCCCcEE-eecCcCCHHHHH----HHHHcC
Q 020013 125 KA--VNAGVDAIIVQGREA----GGHVIGQ-----DGLISLLPMVVDLIGDRDIPII-AAGGIVDARGYV----AALSLG 188 (332)
Q Consensus 125 ~a--~~~g~D~ivv~G~ea----GGh~~~~-----~~~~~ll~~i~~~~~~~~iPvi-aaGGI~~~~~v~----~al~~G 188 (332)
.+ .+.|+|.+.+.-+.. .|...+. ......+.++.+.. .+|+| .+||. +.+... .++.+|
T Consensus 196 ~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~---~~P~v~lsgG~-~~~~fl~~v~~A~~aG 271 (332)
T 3iv3_A 196 VFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST---DLPYIYLSAGV-SAELFQETLVFAHKAG 271 (332)
T ss_dssp HHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC---SSCEEEECTTC-CHHHHHHHHHHHHHHT
T ss_pred HHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC---CCCEEEECCCC-CHHHHHHHHHHHHHcC
Confidence 34 366999999963311 0211111 11123355555544 79965 79999 555554 555689
Q ss_pred c--ceeeeccccccC
Q 020013 189 A--QGICLGTRFVAS 201 (332)
Q Consensus 189 A--~gV~~GT~fl~t 201 (332)
| .||.+|......
T Consensus 272 a~f~Gv~~GRnvwq~ 286 (332)
T 3iv3_A 272 AKFNGVLCGRATWAG 286 (332)
T ss_dssp CCCCEEEECHHHHTT
T ss_pred CCcceEEeeHHHHHh
Confidence 9 999999986644
No 213
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=95.86 E-value=0.63 Score=42.12 Aligned_cols=133 Identities=17% Similarity=0.156 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHhh-cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCc--------HHHHHHHHhCCCEEEE----
Q 020013 49 DYLRDLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS--------EELVLEAHSAGVKVVP---- 115 (332)
Q Consensus 49 e~~~~~i~~~r~~-~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~--------~~~i~~~~~~g~~v~~---- 115 (332)
+.+...+..+.+. .+.|+.+++=--. ..+.+..+++.|...|-+.....| .++++.++..|+.|=.
T Consensus 59 ~~~~~~v~~aa~~~~~VPValHLDHg~-~~e~~~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~ 137 (307)
T 3n9r_A 59 DMAVGMVKIMCERYPHIPVALHLDHGT-TFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGR 137 (307)
T ss_dssp HHHHHHHHHHHHHSTTSCEEEEEEEEC-SHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCCCC-CHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeee
Confidence 3344444444433 4567777653222 246677777888877776533333 2455666777765521
Q ss_pred ---------------ecCCHHHHHHHH-HcCCCEEEE-ecCCCCccc--CCCCchhhhHHHHHHHhCCCCCcEEeecCcC
Q 020013 116 ---------------QVGSFDEARKAV-NAGVDAIIV-QGREAGGHV--IGQDGLISLLPMVVDLIGDRDIPIIAAGGIV 176 (332)
Q Consensus 116 ---------------~v~s~~~a~~a~-~~g~D~ivv-~G~eaGGh~--~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~ 176 (332)
..++++++.... +.|+|.+-+ .|.-=|-.. +.+.-.+.+|.++.+.. ++|++.-||=+
T Consensus 138 igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~---~~PLVlHGgS~ 214 (307)
T 3n9r_A 138 LMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT---NIPLVLHGASA 214 (307)
T ss_dssp CCCC----------CCSCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH---CSCEEESSCCC
T ss_pred eccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcC---CCCeEEeCCCC
Confidence 135788998865 579999876 343212211 11234588888886655 79999999554
Q ss_pred CHHHHHHHH
Q 020013 177 DARGYVAAL 185 (332)
Q Consensus 177 ~~~~v~~al 185 (332)
-+.+..+.+
T Consensus 215 vp~~~~~~~ 223 (307)
T 3n9r_A 215 IPDNVRKSY 223 (307)
T ss_dssp CCHHHHHHH
T ss_pred cchHHHHHH
Confidence 444444444
No 214
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.86 E-value=0.18 Score=45.65 Aligned_cols=107 Identities=11% Similarity=0.073 Sum_probs=66.3
Q ss_pred HHHHHHhcCCcEEEEccCCCcHHHHHHH----HhCC--CEEE-Eec-C--CH----------------HHHHHHHHcCCC
Q 020013 79 NIKAILSEKVAVLQVSWGEYSEELVLEA----HSAG--VKVV-PQV-G--SF----------------DEARKAVNAGVD 132 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~g~~~~~~i~~~----~~~g--~~v~-~~v-~--s~----------------~~a~~a~~~g~D 132 (332)
.++.+.+.++|.+.+|.-. ..+.++.+ ++.+ .+++ +.+ + +. +-++.+.+.|+|
T Consensus 95 av~~~a~lGaD~vTVHa~~-G~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~d 173 (303)
T 3ru6_A 95 ACEEVSKLGVDMINIHASA-GKIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLD 173 (303)
T ss_dssp HHHHHHTTTCSEEEEEGGG-CHHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHhcCCCEEEEeccC-CHHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCC
Confidence 4556667899999998321 23344433 3333 2444 212 2 11 123345678999
Q ss_pred EEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHH-----------HHHHHHHcCcceeeeccccccC
Q 020013 133 AIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDAR-----------GYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 133 ~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~-----------~v~~al~~GA~gV~~GT~fl~t 201 (332)
+||+...| +..+++..+ +-.++..+||+ +. +..+++.+|||.+++|+.+..+
T Consensus 174 GvV~s~~E--------------~~~IR~~~~--~~fl~VTPGIr-~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a 236 (303)
T 3ru6_A 174 GMVCSVFE--------------SKKIKEHTS--SNFLTLTPGIR-PFGETNDDQKRVANLAMARENLSDYIVVGRPIYKN 236 (303)
T ss_dssp EEECCTTT--------------HHHHHHHSC--TTSEEEECCCC-TTC--------CCSHHHHHHTTCSEEEECHHHHTS
T ss_pred EEEECHHH--------------HHHHHHhCC--CccEEECCCcC-cccCCcccccccCCHHHHHHcCCCEEEEChHHhCC
Confidence 98872211 345555553 34688899995 33 5778899999999999998876
Q ss_pred cc
Q 020013 202 EE 203 (332)
Q Consensus 202 ~E 203 (332)
+.
T Consensus 237 ~d 238 (303)
T 3ru6_A 237 EN 238 (303)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 215
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.83 E-value=0.032 Score=49.95 Aligned_cols=72 Identities=18% Similarity=0.128 Sum_probs=56.1
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 120 FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
.+.|+..++.|+++|-+---+ ++- .+....+.++++.+ ++||+.-.+|.++.++.++..+|||+|.++.+.+
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~--~~f---~Gs~~~L~~ir~~v---~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDT--PSF---QGAPEFLTAARQAC---SLPALRKDFLFDPYQVYEARSWGADCILIIMASV 153 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCS--TTT---CCCHHHHHHHHHTS---SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS
T ss_pred HHHHHHHHHCCCCEEEEeccc--ccc---CCCHHHHHHHHHhc---CCCEEECCccCCHHHHHHHHHcCCCEEEEccccc
Confidence 456778888999999763210 110 02356778888777 7999999999999999999999999999999877
No 216
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=95.80 E-value=0.17 Score=49.26 Aligned_cols=116 Identities=22% Similarity=0.258 Sum_probs=76.5
Q ss_pred CCCCCCCcHHHHHHHHhCCCceeecC-CCCCCHHHHHHHHHHHHhhc-CCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc
Q 020013 17 PLGPDISGPELVAAVANAGGLGLLRA-PDWEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVS 94 (332)
Q Consensus 17 pM~~g~s~~~la~avs~aGglG~i~~-~~~~~~e~~~~~i~~~r~~~-~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~ 94 (332)
..+.+..+.+.+.++.++|. -++.. ......+...+.++++++.. +.|+.++-.. ..+..+.+.+.|+|+|.+.
T Consensus 225 avG~~~d~~~~a~~l~~aG~-d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~---t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 225 AVGAAPGNEERVKALVEAGV-DVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVA---TAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp ECCSSSCCHHHHHHHHHTTC-SEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEEC---SHHHHHHHHHHTCSEEEEC
T ss_pred eeccccchHHHHHHHHhccC-ceEEeccccccchHHHHHHHHHHHHCCCceEEEcccC---cHHHHHHHHHhCCCEEEEC
Confidence 34333456788888888874 33321 11123355667888888765 6787664222 2567788899999999874
Q ss_pred c--------------CCCcHH----HHHHHHhCCCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 95 W--------------GEYSEE----LVLEAHSAGVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 95 ~--------------g~~~~~----~i~~~~~~g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
. |.+... +.+.+++.+++|++ .+.+.+++.+++..|+|+|.+
T Consensus 301 ~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~i 362 (496)
T 4fxs_A 301 IGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMV 362 (496)
T ss_dssp SSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEe
Confidence 1 122122 23333455899997 588999999999999999998
No 217
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=95.76 E-value=0.53 Score=41.41 Aligned_cols=161 Identities=12% Similarity=0.106 Sum_probs=94.7
Q ss_pred CcHHHHHHHHhCCCceee------cCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCC-----C--------HHHHHHH
Q 020013 23 SGPELVAAVANAGGLGLL------RAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFP-----H--------NENIKAI 83 (332)
Q Consensus 23 s~~~la~avs~aGglG~i------~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~-----~--------~~~~~~~ 83 (332)
.+.+-+.+..++|+ .=| ..++ .+|. ...++.+++..+.| |++++.+- + .+.++.+
T Consensus 9 ~s~~~a~~A~~~GA-dRIELc~~L~~GG-lTPS--~g~i~~~~~~~~ip--v~vMIRPR~GdF~Ys~~E~~~M~~Di~~~ 82 (256)
T 1twd_A 9 YSMECALTAQQNGA-DRVELCAAPKEGG-LTPS--LGVLKSVRQRVTIP--VHPIIRPRGGDFCYSDGEFAAILEDVRTV 82 (256)
T ss_dssp SSHHHHHHHHHTTC-SEEEECBCGGGTC-BCCC--HHHHHHHHHHCCSC--EEEBCCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCC-CEEEEcCCcccCC-CCCC--HHHHHHHHHHcCCc--eEEEECCCCCCCcCCHHHHHHHHHHHHHH
Confidence 45666666656553 222 2222 3443 13345555555555 44455320 1 2345678
Q ss_pred HhcCCcEEEEcc----CCCcHHHHHHHHh--CCCEEEE-----ecCCHHHHH-HHHHcCCCEEEEecCCCCcccCCCCch
Q 020013 84 LSEKVAVLQVSW----GEYSEELVLEAHS--AGVKVVP-----QVGSFDEAR-KAVNAGVDAIIVQGREAGGHVIGQDGL 151 (332)
Q Consensus 84 ~~~~~~~I~~~~----g~~~~~~i~~~~~--~g~~v~~-----~v~s~~~a~-~a~~~g~D~ivv~G~eaGGh~~~~~~~ 151 (332)
.+.|++.|.+++ |....+..+++.+ .+.++.. .+.++.++. .+.+.|+|-|+-.|. .. .....
T Consensus 83 ~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~----~~-~a~~g 157 (256)
T 1twd_A 83 RELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQ----KS-DALQG 157 (256)
T ss_dssp HHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTT----SS-STTTT
T ss_pred HHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCC----CC-CHHHH
Confidence 889999999864 2223344444432 3666542 234665554 456789999997543 22 22233
Q ss_pred hhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccc
Q 020013 152 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTR 197 (332)
Q Consensus 152 ~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~ 197 (332)
+.+|+++.+... ++-|++.||| +.+|+.+.+..|+..+=.+..
T Consensus 158 ~~~L~~Lv~~a~--~i~Im~GgGv-~~~Ni~~l~~tGv~e~H~Sa~ 200 (256)
T 1twd_A 158 LSKIMELIAHRD--APIIMAGAGV-RAENLHHFLDAGVLEVHSSAG 200 (256)
T ss_dssp HHHHHHHHTSSS--CCEEEEESSC-CTTTHHHHHHHTCSEEEECCE
T ss_pred HHHHHHHHHhhC--CcEEEecCCc-CHHHHHHHHHcCCCeEeECCc
Confidence 566666665433 6889999999 899999988889888776543
No 218
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=95.74 E-value=0.2 Score=45.41 Aligned_cols=131 Identities=14% Similarity=0.032 Sum_probs=81.6
Q ss_pred HHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCCCc------------------HHHHHHHHhCCCEEEE
Q 020013 54 LIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS------------------EELVLEAHSAGVKVVP 115 (332)
Q Consensus 54 ~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~~~------------------~~~i~~~~~~g~~v~~ 115 (332)
.++.+.+..+.++.+.+ +..+.++.+++.|++.|.+..+..+ .+.++.+++.|+.|-.
T Consensus 67 ~~~~~~~~~~~~~~~l~----~~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~ 142 (302)
T 2ftp_A 67 VFAGIRQRPGVTYAALA----PNLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRG 142 (302)
T ss_dssp HHHHSCCCTTSEEEEEC----CSHHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhhcCCCEEEEEe----CCHHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 34444333344454432 3467889999999999887433211 2456677888998842
Q ss_pred e---c--------CCHHHHHH----HHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeec----CcC
Q 020013 116 Q---V--------GSFDEARK----AVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAG----GIV 176 (332)
Q Consensus 116 ~---v--------~s~~~a~~----a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaG----GI~ 176 (332)
. + ++++++.. +.+.|+|.|.+--. -|.. .+.....++..+++.++ ++|+-.-+ |++
T Consensus 143 ~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT--~G~~-~P~~~~~lv~~l~~~~~--~~~l~~H~Hn~~Gla 217 (302)
T 2ftp_A 143 YISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDT--IGVG-TAGATRRLIEAVASEVP--RERLAGHFHDTYGQA 217 (302)
T ss_dssp EEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEES--SSCC-CHHHHHHHHHHHTTTSC--GGGEEEEEBCTTSCH
T ss_pred EEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCC--CCCc-CHHHHHHHHHHHHHhCC--CCeEEEEeCCCccHH
Confidence 2 1 35665544 45799999988532 1221 23344667777766552 47877654 774
Q ss_pred CHHHHHHHHHcCcceeee
Q 020013 177 DARGYVAALSLGAQGICL 194 (332)
Q Consensus 177 ~~~~v~~al~~GA~gV~~ 194 (332)
-.++.+++.+|++-|..
T Consensus 218 -~An~laAv~aGa~~vd~ 234 (302)
T 2ftp_A 218 -LANIYASLLEGIAVFDS 234 (302)
T ss_dssp -HHHHHHHHHTTCCEEEE
T ss_pred -HHHHHHHHHhCCCEEEe
Confidence 47788999999987654
No 219
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=95.65 E-value=0.056 Score=47.66 Aligned_cols=119 Identities=15% Similarity=0.214 Sum_probs=72.1
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHH----HHHHHHhCCCEEEEecCCH-HH--H-----------HHHHH-cCCC
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEE----LVLEAHSAGVKVVPQVGSF-DE--A-----------RKAVN-AGVD 132 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~----~i~~~~~~g~~v~~~v~s~-~~--a-----------~~a~~-~g~D 132 (332)
....+.+.|++++.++ |+. ..+ -++.+.+.|+.++..++.. ++ + ..+++ ..++
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGE~leere~g~t~~vv~~Ql~~~l~~~~~~ 156 (250)
T 1yya_A 78 SARMLSDLGCRYAIVGHSERRRYHGE-TDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPP 156 (250)
T ss_dssp CHHHHHHTTCSEEEESCHHHHHHSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCS
T ss_pred CHHHHHHcCCCEEEeCchhhhcccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHH
Confidence 4567888999999985 454 333 2344567899988888743 21 1 11121 2334
Q ss_pred -----EEEEecCCCCcccCCCCch-------hhhHHHHHHH-hC---CCCCcEEeecCcCCHHHHHHHHHc-Ccceeeec
Q 020013 133 -----AIIVQGREAGGHVIGQDGL-------ISLLPMVVDL-IG---DRDIPIIAAGGIVDARGYVAALSL-GAQGICLG 195 (332)
Q Consensus 133 -----~ivv~G~eaGGh~~~~~~~-------~~ll~~i~~~-~~---~~~iPviaaGGI~~~~~v~~al~~-GA~gV~~G 195 (332)
+|-.+..-+=|. |...+ ...+++.... +. ..+++|+..|+| +++|+.+.++. +.||+.+|
T Consensus 157 ~~~~vvIAYEPvWAIGT--G~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVG 233 (250)
T 1yya_A 157 GPEALVIAYEPVWAIGT--GKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSV-NPKNFADLLSMPNVDGGLVG 233 (250)
T ss_dssp SGGGCEEEECCGGGSSS--SCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSC-CTTTHHHHHTSTTCCEEEES
T ss_pred HcCcEEEEECCHHHhCC--CCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCC-CHHHHHHHHcCCCCCeeEee
Confidence 343454444443 12122 2233332211 11 026899999999 78999999998 99999999
Q ss_pred cccccC
Q 020013 196 TRFVAS 201 (332)
Q Consensus 196 T~fl~t 201 (332)
++-+..
T Consensus 234 gAsL~a 239 (250)
T 1yya_A 234 GASLEL 239 (250)
T ss_dssp GGGSSH
T ss_pred HHHhCh
Confidence 997654
No 220
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.65 E-value=0.045 Score=49.07 Aligned_cols=96 Identities=25% Similarity=0.366 Sum_probs=66.0
Q ss_pred CEEEEecCCHHHHHHHHHcCCCEEEEe-cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee----cC-cCCH------
Q 020013 111 VKVVPQVGSFDEARKAVNAGVDAIIVQ-GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA----GG-IVDA------ 178 (332)
Q Consensus 111 ~~v~~~v~s~~~a~~a~~~g~D~ivv~-G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa----GG-I~~~------ 178 (332)
+.+=..+.|++.+..|++.|+|-|=+- +...||.+ ++..++..+++.+ ++||.+- || ....
T Consensus 40 ~~lEvc~~s~~~a~~A~~gGAdRIELc~~l~~GGlT----PS~g~i~~a~~~~---~ipV~vMIRPRgGdF~Ys~~E~~~ 112 (287)
T 3iwp_A 40 FLMEVCVDSVESAVNAERGGADRIELCSGLSEGGTT----PSMGVLQVVKQSV---QIPVFVMIRPRGGDFLYSDREIEV 112 (287)
T ss_dssp SEEEEEESSHHHHHHHHHHTCSEEEECBCGGGTCBC----CCHHHHHHHHTTC---CSCEEEECCSSSSCSCCCHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHhCCCEEEECCCCCCCCCC----CCHHHHHHHHHhc---CCCeEEEEecCCCCcccCHHHHHH
Confidence 344456789999999999999999773 44456654 4567777777765 6887753 33 3222
Q ss_pred --HHHHHHHHcCcceeeeccccccCccCCCCHHHHHHHhc
Q 020013 179 --RGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVE 216 (332)
Q Consensus 179 --~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~~ 216 (332)
+++..+.++|||||++|- .++|...+...-+.+++
T Consensus 113 M~~dI~~~~~~GAdGvVfG~---L~~dg~iD~~~~~~Li~ 149 (287)
T 3iwp_A 113 MKADIRLAKLYGADGLVFGA---LTEDGHIDKELCMSLMA 149 (287)
T ss_dssp HHHHHHHHHHTTCSEEEECC---BCTTSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEee---eCCCCCcCHHHHHHHHH
Confidence 588888899999999993 24555566555444444
No 221
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=95.64 E-value=0.035 Score=49.13 Aligned_cols=119 Identities=16% Similarity=0.194 Sum_probs=72.6
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHH----HHHHHhCCCEEEEecCC-HHH-------------HHHHH-HcCCC
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEEL----VLEAHSAGVKVVPQVGS-FDE-------------ARKAV-NAGVD 132 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~----i~~~~~~g~~v~~~v~s-~~~-------------a~~a~-~~g~D 132 (332)
....+.+.|++++.++ |+. ..+. ++.+.+.|+.++..++. .++ .+.++ ....+
T Consensus 81 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~ 159 (256)
T 1aw2_A 81 SPAMLKEFGATHIIIGHSERREYHAE-SDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVE 159 (256)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCC-CHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGG
T ss_pred CHHHHHHcCCCEEEECchhhccccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHH
Confidence 4567788999999985 454 3444 44556679998888873 332 11111 12333
Q ss_pred ----EEE-EecCCCCcccCCCCch-------hhhHHHHHHHhC---CCCCcEEeecCcCCHHHHHHHHHc-Ccceeeecc
Q 020013 133 ----AII-VQGREAGGHVIGQDGL-------ISLLPMVVDLIG---DRDIPIIAAGGIVDARGYVAALSL-GAQGICLGT 196 (332)
Q Consensus 133 ----~iv-v~G~eaGGh~~~~~~~-------~~ll~~i~~~~~---~~~iPviaaGGI~~~~~v~~al~~-GA~gV~~GT 196 (332)
.|| .+..-+-|. |...+ ...+++....+. ..+++|+..|+| +++|+.+.++. +.||+.+|+
T Consensus 160 ~~~~vvIAYEPvWAIGT--G~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGg 236 (256)
T 1aw2_A 160 ALEGAIIAYEPIWAIGT--GKAATAEDAQRIHAQIRAHIAEKSEAVAKNVVIQYGGSV-KPENAAAYFAQPDIDGALVGG 236 (256)
T ss_dssp GGTTCEEEECCTTTTTS--SCCCCHHHHHHHHHHHHHHHHTTCHHHHHHCEEEECSCC-CTTTHHHHTTSTTCCEEEESG
T ss_pred HcCCEEEEECCHHHhCC--CCCCCHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCC-CHHHHHHHHcCCCCCeeeecH
Confidence 344 455555443 22222 223333221110 014899999999 78999999988 999999999
Q ss_pred ccccC
Q 020013 197 RFVAS 201 (332)
Q Consensus 197 ~fl~t 201 (332)
+-+..
T Consensus 237 AsL~a 241 (256)
T 1aw2_A 237 AALDA 241 (256)
T ss_dssp GGGCH
T ss_pred HHhCh
Confidence 97754
No 222
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=95.63 E-value=0.25 Score=44.57 Aligned_cols=181 Identities=16% Similarity=0.164 Sum_probs=110.4
Q ss_pred hhhcCCccceecCCCCCCCCcHHHHHHHHhCCC---------cee--ecCC--CCCCHHHHHHHHHHHHhhcCCcEEEEe
Q 020013 4 RGMLGFEYGIVQAPLGPDISGPELVAAVANAGG---------LGL--LRAP--DWEAPDYLRDLIRKTRSLTERPFGVGV 70 (332)
Q Consensus 4 ~~~l~~~~Pii~apM~~g~s~~~la~avs~aGg---------lG~--i~~~--~~~~~e~~~~~i~~~r~~~~~p~gvnl 70 (332)
.+++.-.-||+ |. +.-++-.+..+.++|. ++. ++.+ ...+.+++...++.+...++.|+-+.+
T Consensus 10 r~l~~~~~~i~---~~-~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~ 85 (295)
T 1xg4_A 10 RAALTKENPLQ---IV-GTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDA 85 (295)
T ss_dssp HHHHHHSSSEE---EE-ECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred HHHHhCCCcEE---Ee-cCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecC
Confidence 34443334554 32 4668888888878762 121 1111 124667777777777777788877765
Q ss_pred ecCCC-C----HHHHHHHHhcCCcEEEEccCC--------------CcHHHHHHHH---h----CCCEEEEecCC-----
Q 020013 71 VLAFP-H----NENIKAILSEKVAVLQVSWGE--------------YSEELVLEAH---S----AGVKVVPQVGS----- 119 (332)
Q Consensus 71 ~~~~~-~----~~~~~~~~~~~~~~I~~~~g~--------------~~~~~i~~~~---~----~g~~v~~~v~s----- 119 (332)
-.-.. . .+.+..+.+.|+..|.+--+. +..+.+++++ + .+..|..-...
T Consensus 86 d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~g 165 (295)
T 1xg4_A 86 DIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEG 165 (295)
T ss_dssp TTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHC
T ss_pred CcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcC
Confidence 22111 1 234556678899999874221 1224444443 2 24666655442
Q ss_pred ----HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee---cCcCCHHHHHHHHHcCccee
Q 020013 120 ----FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA---GGIVDARGYVAALSLGAQGI 192 (332)
Q Consensus 120 ----~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa---GGI~~~~~v~~al~~GA~gV 192 (332)
++.++...++|+|.|++++. ++...+.++.+.+ ++|+++. ||-...-+..+.-.+|++.|
T Consensus 166 l~~ai~ra~ay~eAGAd~i~~e~~----------~~~~~~~~i~~~~---~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v 232 (295)
T 1xg4_A 166 LDAAIERAQAYVEAGAEMLFPEAI----------TELAMYRQFADAV---QVPILANITEFGATPLFTTDELRSAHVAMA 232 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEETTC----------CSHHHHHHHHHHH---CSCBEEECCSSSSSCCCCHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCC----------CCHHHHHHHHHHc---CCCEEEEecccCCCCCCCHHHHHHcCCCEE
Confidence 23455677899999999543 2367788888888 7998653 34333345667778999999
Q ss_pred eeccccccC
Q 020013 193 CLGTRFVAS 201 (332)
Q Consensus 193 ~~GT~fl~t 201 (332)
.+|...+.+
T Consensus 233 ~~~~~~~~a 241 (295)
T 1xg4_A 233 LYPLSAFRA 241 (295)
T ss_dssp EESSHHHHH
T ss_pred EEChHHHHH
Confidence 999886643
No 223
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=95.63 E-value=0.12 Score=44.87 Aligned_cols=100 Identities=15% Similarity=0.130 Sum_probs=68.7
Q ss_pred HHHHHHHhcCCcEEEEccCCC-cHHHHHHHHh-C-CCEEE-EecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhh
Q 020013 78 ENIKAILSEKVAVLQVSWGEY-SEELVLEAHS-A-GVKVV-PQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLIS 153 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~-~~~~i~~~~~-~-g~~v~-~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ 153 (332)
+.++.+++.|+++|++..-.+ ..+.++.+++ . .+.+. ..+.+.++++.+.++|+|+|+. | +. +..
T Consensus 42 ~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~-----p-~~-----d~~ 110 (225)
T 1mxs_A 42 PLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVT-----P-GI-----TED 110 (225)
T ss_dssp HHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEEC-----S-SC-----CHH
T ss_pred HHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEe-----C-CC-----CHH
Confidence 457778889999999975432 2345554443 2 34443 2455779999999999999964 2 21 122
Q ss_pred hHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeee
Q 020013 154 LLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 154 ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~ 194 (332)
.+. .++.. ++|++. |+.|+..+.+++.+|||-|.+
T Consensus 111 v~~-~~~~~---g~~~i~--G~~t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 111 ILE-AGVDS---EIPLLP--GISTPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp HHH-HHHHC---SSCEEC--EECSHHHHHHHHTTTCCEEEE
T ss_pred HHH-HHHHh---CCCEEE--eeCCHHHHHHHHHCCCCEEEE
Confidence 332 23333 678876 499999999999999999988
No 224
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=95.59 E-value=0.4 Score=42.47 Aligned_cols=146 Identities=13% Similarity=0.117 Sum_probs=89.7
Q ss_pred cceecCCCCCCCCcHHHHHHHHhCCCceee-c-------CC----CCCCHHHHHHHHHHHHhhcCCcE-EEEeec-CC-C
Q 020013 11 YGIVQAPLGPDISGPELVAAVANAGGLGLL-R-------AP----DWEAPDYLRDLIRKTRSLTERPF-GVGVVL-AF-P 75 (332)
Q Consensus 11 ~Pii~apM~~g~s~~~la~avs~aGglG~i-~-------~~----~~~~~e~~~~~i~~~r~~~~~p~-gvnl~~-~~-~ 75 (332)
-||+ |. +.-|...|..+.++|.=.++ + .+ ...+.+++....+.++..++.|+ -+.+-. .. .
T Consensus 17 ~~i~---~~-tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~ 92 (264)
T 1m3u_A 17 KRFA---TI-TAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYAT 92 (264)
T ss_dssp CCEE---EE-ECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSS
T ss_pred CcEE---EE-eCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCC
Confidence 4665 32 46688888888888731111 1 11 12355666666677766666554 333322 11 1
Q ss_pred CHHHH---HHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEec-----------------CCH-------HHHHHHHH
Q 020013 76 HNENI---KAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQV-----------------GSF-------DEARKAVN 128 (332)
Q Consensus 76 ~~~~~---~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v-----------------~s~-------~~a~~a~~ 128 (332)
.++.+ ..+.+.|++.|.+-.|..-.+.++.+.+.|++|+..+ .+. ++++..++
T Consensus 93 ~~~a~~~a~rl~kaGa~aVklEgg~e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~e 172 (264)
T 1m3u_A 93 PEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEA 172 (264)
T ss_dssp HHHHHHHHHHHHHTTCSEEECCCSGGGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcHHHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHH
Confidence 12223 3566689999998645445678888889999987321 122 34455678
Q ss_pred cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecC
Q 020013 129 AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGG 174 (332)
Q Consensus 129 ~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGG 174 (332)
+|+|.|++++. + ..+..++.+.+ ++|+|..|.
T Consensus 173 AGA~~ivlE~v----------p-~~~a~~it~~l---~iP~igIGa 204 (264)
T 1m3u_A 173 AGAQLLVLECV----------P-VELAKRITEAL---AIPVIGIGA 204 (264)
T ss_dssp HTCCEEEEESC----------C-HHHHHHHHHHC---SSCEEEESS
T ss_pred CCCcEEEEecC----------C-HHHHHHHHHhC---CCCEEEeCC
Confidence 99999999653 1 24677888887 799997553
No 225
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=95.59 E-value=0.038 Score=54.02 Aligned_cols=183 Identities=22% Similarity=0.324 Sum_probs=113.2
Q ss_pred cchhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcC----CcEEE---------
Q 020013 2 GWRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTE----RPFGV--------- 68 (332)
Q Consensus 2 ~~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~----~p~gv--------- 68 (332)
.|++.+++++|++++||. .++..+++.+++++||+|+|.. + .+.+...+.+++++...+ .|+.+
T Consensus 59 ~lt~~i~l~iPivsa~Md-tvTe~~lAia~a~~GgiGvIh~-~-~~~~~q~~~V~~V~~~~~~m~~d~v~l~~~~tv~ea 135 (511)
T 3usb_A 59 VLSESLQLNIPLISAGMD-TVTEADMAIAMARQGGLGIIHK-N-MSIEQQAEQVDKVKRSESGVISDPFFLTPEHQVYDA 135 (511)
T ss_dssp EEETTEEESSSEEECSCT-TTCSHHHHHHHHHHTCEEEECS-S-SCHHHHHHHHHHHHTSSSCSSSSCCCBCTTSBHHHH
T ss_pred EeecccccCCCccccCch-hhcHHHHHHHHHhcCCceeecc-c-CCHHHHHHHHHHhhccccccccCCEEECCCCCHHHH
Confidence 367889999999999998 7999999999999999999986 3 566665566666654311 11110
Q ss_pred ------------------------Eeec-------------------C-C--------CCHHHHHHHHhcCCcEEEEc--
Q 020013 69 ------------------------GVVL-------------------A-F--------PHNENIKAILSEKVAVLQVS-- 94 (332)
Q Consensus 69 ------------------------nl~~-------------------~-~--------~~~~~~~~~~~~~~~~I~~~-- 94 (332)
+++. . . +..+.++.+.+.+...+.+-
T Consensus 136 ~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe 215 (511)
T 3usb_A 136 EHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDN 215 (511)
T ss_dssp HHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTCCCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhhccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC
Confidence 0000 0 0 01223333444444332221
Q ss_pred c----CC-CcHHHHHHHHhC--------CCEEEEecC----CHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHH
Q 020013 95 W----GE-YSEELVLEAHSA--------GVKVVPQVG----SFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPM 157 (332)
Q Consensus 95 ~----g~-~~~~~i~~~~~~--------g~~v~~~v~----s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~ 157 (332)
. |. ...++++.+... ...+...+. +.+.+..+.++|+|.|++.... || ....+.++++
T Consensus 216 ~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~--g~---~~~v~~~i~~ 290 (511)
T 3usb_A 216 NGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAH--GH---SQGVIDKVKE 290 (511)
T ss_dssp TSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSC--TT---SHHHHHHHHH
T ss_pred CCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccceEEecccc--cc---hhhhhhHHHH
Confidence 0 00 012333333220 111222222 3566777889999999997542 23 2345778888
Q ss_pred HHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeec
Q 020013 158 VVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 195 (332)
Q Consensus 158 i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~G 195 (332)
+++..+ ++||+ +|+|.+.+.+..+..+|||+|.+|
T Consensus 291 i~~~~~--~~~vi-~g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 291 VRAKYP--SLNII-AGNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHCT--TSEEE-EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHhCC--CceEE-eeeeccHHHHHHHHHhCCCEEEEC
Confidence 888763 57777 578999999999999999999874
No 226
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=95.57 E-value=0.84 Score=40.72 Aligned_cols=137 Identities=18% Similarity=0.220 Sum_probs=86.5
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC-CcHHHHHHHHhCCCEEEEecC---CHHHHHHHH-
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE-YSEELVLEAHSAGVKVVPQVG---SFDEARKAV- 127 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~-~~~~~i~~~~~~g~~v~~~v~---s~~~a~~a~- 127 (332)
++++++++..+.|+..-++- ...++.+.+. ++++.++... ....+++.+-+.|.+|+.+-+ ++++...+.
T Consensus 92 ~~l~~~~~~~Gl~~~te~~d----~~~~~~l~~~-vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave 166 (276)
T 1vs1_A 92 KLLRRAGDEAGLPVVTEVLD----PRHVETVSRY-ADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAE 166 (276)
T ss_dssp HHHHHHHHHHTCCEEEECCC----GGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEecCC----HHHHHHHHHh-CCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHH
Confidence 34455555567777765543 5667777787 9999997443 344677777777899886643 567766544
Q ss_pred ---HcCC-CEEEEe-cCCCC-cccCCCCchhhhHHHHHHHhCCCCCcEEee-c---CcCC--HHHHHHHHHcCcceeeec
Q 020013 128 ---NAGV-DAIIVQ-GREAG-GHVIGQDGLISLLPMVVDLIGDRDIPIIAA-G---GIVD--ARGYVAALSLGAQGICLG 195 (332)
Q Consensus 128 ---~~g~-D~ivv~-G~eaG-Gh~~~~~~~~~ll~~i~~~~~~~~iPviaa-G---GI~~--~~~v~~al~~GA~gV~~G 195 (332)
..|. +.++++ |.... +.. .....+..++.+++.. ++||+.. . |..+ ..-..+++++||+|+++=
T Consensus 167 ~i~~~Gn~~i~L~~Rg~~~yp~y~-~~~vdl~~i~~lk~~~---~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE 242 (276)
T 1vs1_A 167 YILLEGNWQVVLVERGIRTFEPST-RFTLDVAAVAVLKEAT---HLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVE 242 (276)
T ss_dssp HHHHTTCCCEEEEECCBCCSCCSS-SSBCBHHHHHHHHHHB---SSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHcCCCeEEEEeCCcCCCCCcC-cchhCHHHHHHHHHHh---CCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEE
Confidence 4565 777776 65221 211 1223466677777765 6898652 2 4322 233556788999999998
Q ss_pred ccc
Q 020013 196 TRF 198 (332)
Q Consensus 196 T~f 198 (332)
+-|
T Consensus 243 ~H~ 245 (276)
T 1vs1_A 243 VHP 245 (276)
T ss_dssp BCS
T ss_pred ecC
Confidence 776
No 227
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.56 E-value=0.24 Score=46.70 Aligned_cols=109 Identities=14% Similarity=0.202 Sum_probs=74.0
Q ss_pred CCcHHHHHHHHhCCCceeec--CCCCCCHHHHHHHHHHHHhhcCCcEEE-EeecCCCCHHHHHHHHhcCCcEEEEcc---
Q 020013 22 ISGPELVAAVANAGGLGLLR--APDWEAPDYLRDLIRKTRSLTERPFGV-GVVLAFPHNENIKAILSEKVAVLQVSW--- 95 (332)
Q Consensus 22 ~s~~~la~avs~aGglG~i~--~~~~~~~e~~~~~i~~~r~~~~~p~gv-nl~~~~~~~~~~~~~~~~~~~~I~~~~--- 95 (332)
+.+.+.+.++.++|. .++. .. ...++.+.+.++++++..+.|+.+ |+.. .+..+.+.+.|+|+|.++.
T Consensus 143 ~~~~e~~~~lveaGv-dvIvldta-~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t----~e~A~~a~~aGAD~I~vG~g~G 216 (400)
T 3ffs_A 143 VNEIERAKLLVEAGV-DVIVLDSA-HGHSLNIIRTLKEIKSKMNIDVIVGNVVT----EEATKELIENGADGIKVGIGPG 216 (400)
T ss_dssp CC-CHHHHHHHHHTC-SEEEECCS-CCSBHHHHHHHHHHHTTCCCEEEEEEECS----HHHHHHHHHTTCSEEEECC---
T ss_pred CCHHHHHHHHHHcCC-CEEEEeCC-CCCcccHHHHHHHHHhcCCCeEEEeecCC----HHHHHHHHHcCCCEEEEeCCCC
Confidence 444678888888873 3442 22 234566677888888766677765 4432 5677888999999998842
Q ss_pred -----------CCCcHHHHHHH----HhCCCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 96 -----------GEYSEELVLEA----HSAGVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 96 -----------g~~~~~~i~~~----~~~g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
|.+....+..+ ++.+++|+. .+.+.+++.+++.+|+|+|.+
T Consensus 217 s~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~v 274 (400)
T 3ffs_A 217 SICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMI 274 (400)
T ss_dssp ------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEE
T ss_pred cCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEE
Confidence 11222233333 235899997 588999999999999999988
No 228
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=95.54 E-value=0.26 Score=46.49 Aligned_cols=108 Identities=17% Similarity=0.190 Sum_probs=72.1
Q ss_pred cHHHHHHHHhCCCceeec-CCCCCCHHHHHHHHHHHHhhc-CCcEEE-EeecCCCCHHHHHHHHhcCCcEEEEc------
Q 020013 24 GPELVAAVANAGGLGLLR-APDWEAPDYLRDLIRKTRSLT-ERPFGV-GVVLAFPHNENIKAILSEKVAVLQVS------ 94 (332)
Q Consensus 24 ~~~la~avs~aGglG~i~-~~~~~~~e~~~~~i~~~r~~~-~~p~gv-nl~~~~~~~~~~~~~~~~~~~~I~~~------ 94 (332)
..+.+..+.++|.=.+.. .. ..+++.+.+.++.+|+.+ +.|+.+ ++.. .+.++.+.+.|+|+|.++
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~-~g~~~~~~e~i~~ir~~~~~~pviv~~v~~----~~~a~~a~~~Gad~I~vg~~~G~~ 228 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSA-HGHSTRIIELIKKIKTKYPNLDLIAGNIVT----KEAALDLISVGADCLKVGIGPGSI 228 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCS-CCSSHHHHHHHHHHHHHCTTCEEEEEEECS----HHHHHHHHTTTCSEEEECSSCSTT
T ss_pred HHHHHHHHHHCCCCEEEEeCC-CCChHHHHHHHHHHHHHCCCCeEEEcCCCc----HHHHHHHHhcCCCEEEECCCCCcC
Confidence 456666666666433321 11 234566778888888877 678876 3322 567788889999999882
Q ss_pred --------cCCCcHHHHHHHH----hCCCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 95 --------WGEYSEELVLEAH----SAGVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 95 --------~g~~~~~~i~~~~----~~g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
.|.+..+.+..++ ..+++|+. .+.+.+++.+++..|+|+|.+
T Consensus 229 ~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~i 284 (404)
T 1eep_A 229 CTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMI 284 (404)
T ss_dssp SHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred cCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhh
Confidence 1222223333333 25789886 588999999999999999988
No 229
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.54 E-value=0.3 Score=45.41 Aligned_cols=110 Identities=14% Similarity=0.180 Sum_probs=74.8
Q ss_pred CCcHHHHHHHHhCCCceeec-CCCCCCHHHHHHHHHHHHhhcCCcEEE-EeecCCCCHHHHHHHHhcCCcEEEEcc----
Q 020013 22 ISGPELVAAVANAGGLGLLR-APDWEAPDYLRDLIRKTRSLTERPFGV-GVVLAFPHNENIKAILSEKVAVLQVSW---- 95 (332)
Q Consensus 22 ~s~~~la~avs~aGglG~i~-~~~~~~~e~~~~~i~~~r~~~~~p~gv-nl~~~~~~~~~~~~~~~~~~~~I~~~~---- 95 (332)
+.+.+.+..+.++|.-.+.. .. ...++.+.+.++++++..+.|+.+ |+. ..+.++.+.+.|+|+|.++.
T Consensus 104 ~~~~e~a~~l~eaGad~I~ld~a-~G~~~~~~~~i~~i~~~~~~~Vivg~v~----t~e~A~~l~~aGaD~I~VG~~~Gs 178 (361)
T 3khj_A 104 VNEIERAKLLVEAGVDVIVLDSA-HGHSLNIIRTLKEIKSKMNIDVIVGNVV----TEEATKELIENGADGIKVGIGPGS 178 (361)
T ss_dssp TTCHHHHHHHHHTTCSEEEECCS-CCSBHHHHHHHHHHHHHCCCEEEEEEEC----SHHHHHHHHHTTCSEEEECSSCCT
T ss_pred CCHHHHHHHHHHcCcCeEEEeCC-CCCcHHHHHHHHHHHHhcCCcEEEccCC----CHHHHHHHHHcCcCEEEEecCCCc
Confidence 34478888888888544431 22 224556677788888766777776 443 25678888999999998741
Q ss_pred ----------CCCcHHHHHHH----HhCCCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 96 ----------GEYSEELVLEA----HSAGVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 96 ----------g~~~~~~i~~~----~~~g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
|.+....+..+ ++.+++|+. .+.+.+++.+++.+|+|+|.+
T Consensus 179 ~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~v 235 (361)
T 3khj_A 179 ICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMI 235 (361)
T ss_dssp TCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred CCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 12222223333 335789887 477999999999999999988
No 230
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=95.51 E-value=0.019 Score=51.47 Aligned_cols=109 Identities=15% Similarity=0.174 Sum_probs=63.8
Q ss_pred HHHHHHhcCCcEEEEcc--C-----CCc-----HHHHHHHHhC--CC--EEEEec---CCHH----HHHHHHHcCCCEEE
Q 020013 79 NIKAILSEKVAVLQVSW--G-----EYS-----EELVLEAHSA--GV--KVVPQV---GSFD----EARKAVNAGVDAII 135 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~--g-----~~~-----~~~i~~~~~~--g~--~v~~~v---~s~~----~a~~a~~~g~D~iv 135 (332)
..+.+++.|++-|.+.. | ... .+.++.+++. +. ||+... ++.+ ..+.+.++|+|+|.
T Consensus 111 E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVK 190 (281)
T 2a4a_A 111 DTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTEDLIIKTTLAVLNGNADFIK 190 (281)
T ss_dssp HHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEE
T ss_pred HHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEE
Confidence 35667788999887642 1 111 1122333432 32 344322 3433 23456789999998
Q ss_pred Ee-cCCCCcccCCCCchhhhHHHHHHHh------CCCCCcEEeecCcCCHHHHHHHHHcCcc
Q 020013 136 VQ-GREAGGHVIGQDGLISLLPMVVDLI------GDRDIPIIAAGGIVDARGYVAALSLGAQ 190 (332)
Q Consensus 136 v~-G~eaGGh~~~~~~~~~ll~~i~~~~------~~~~iPviaaGGI~~~~~v~~al~~GA~ 190 (332)
.. |+..||-+ .....++.++.+.. ...+++|-++|||.|.+++.+++.+||+
T Consensus 191 TSTGf~~~gAT---~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 191 TSTGKVQINAT---PSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp CCCSCSSCCCC---HHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred eCCCCCCCCCC---HHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 73 55434321 23344444444211 0137999999999999999999999876
No 231
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=95.46 E-value=1.1 Score=41.39 Aligned_cols=137 Identities=18% Similarity=0.224 Sum_probs=83.8
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC-CcHHHHHHHHhCCCEEEEecC---CHHHHHHHH-
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE-YSEELVLEAHSAGVKVVPQVG---SFDEARKAV- 127 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~-~~~~~i~~~~~~g~~v~~~v~---s~~~a~~a~- 127 (332)
+++++.++.++.|+..-++- ...++.+.+. +|++.++... ....+++.+-+.+.+|+.+-+ ++++...+.
T Consensus 160 ~~l~~~~~e~Gl~~~te~~d----~~~~~~l~~~-vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave 234 (350)
T 1vr6_A 160 EYLREAADKYGMYVVTEALG----EDDLPKVAEY-ADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAE 234 (350)
T ss_dssp HHHHHHHHHHTCEEEEECSS----GGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEeCC----HHHHHHHHHh-CCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHH
Confidence 34455555556777665443 5667777777 9999997443 334577777778999886643 667766554
Q ss_pred ---HcCC-CEEEE-ecCCC-CcccCCCCchhhhHHHHHHHhCCCCCcEEe-ec---CcCC--HHHHHHHHHcCcceeeec
Q 020013 128 ---NAGV-DAIIV-QGREA-GGHVIGQDGLISLLPMVVDLIGDRDIPIIA-AG---GIVD--ARGYVAALSLGAQGICLG 195 (332)
Q Consensus 128 ---~~g~-D~ivv-~G~ea-GGh~~~~~~~~~ll~~i~~~~~~~~iPvia-aG---GI~~--~~~v~~al~~GA~gV~~G 195 (332)
..|. +.+++ .|... -+.. .....+..++.+++.. ++||+. .. |-.+ ..-..+++++||+|+++=
T Consensus 235 ~i~~~GN~~viLceRG~~typ~~~-~~~vdl~ai~~lk~~~---~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE 310 (350)
T 1vr6_A 235 YIANSGNTKIILCERGIRTFEKAT-RNTLDISAVPIIRKES---HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVE 310 (350)
T ss_dssp HHHHTTCCCEEEEECCBCCSCCSS-SSBCCTTHHHHHHHHB---SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHCCCCeEEEEeCCCCCCCCcC-hhhhhHHHHHHHHHhh---CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEE
Confidence 4565 66665 34311 1110 1223466678887765 689866 22 4221 233456688999999986
Q ss_pred ccc
Q 020013 196 TRF 198 (332)
Q Consensus 196 T~f 198 (332)
+-|
T Consensus 311 ~H~ 313 (350)
T 1vr6_A 311 VHP 313 (350)
T ss_dssp BCS
T ss_pred ecC
Confidence 554
No 232
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=95.43 E-value=0.73 Score=41.36 Aligned_cols=181 Identities=16% Similarity=0.169 Sum_probs=109.6
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCC---------cee--ecCC--CCCCHHHHHHHHHHHHhhcCCcEEEE
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGG---------LGL--LRAP--DWEAPDYLRDLIRKTRSLTERPFGVG 69 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGg---------lG~--i~~~--~~~~~e~~~~~i~~~r~~~~~p~gvn 69 (332)
|.+++.-.-||+ |. +.-++-.+..+.++|. ++. ++.+ ...+.+++...++.+...++.|+-+.
T Consensus 13 lr~l~~~~~~i~---~~-~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD 88 (287)
T 3b8i_A 13 FRALLDSSRCYH---TA-SVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIAD 88 (287)
T ss_dssp HHHHHHSSCCEE---CE-ECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred HHHHHhCCCcEE---Ee-cCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 344454344665 32 5678888888888862 111 1211 13466777777777777777886665
Q ss_pred eecCCCC----HHHHHHHHhcCCcEEEEccCCCc-------------HHHHHHH---HhC----CCEEEEecC-------
Q 020013 70 VVLAFPH----NENIKAILSEKVAVLQVSWGEYS-------------EELVLEA---HSA----GVKVVPQVG------- 118 (332)
Q Consensus 70 l~~~~~~----~~~~~~~~~~~~~~I~~~~g~~~-------------~~~i~~~---~~~----g~~v~~~v~------- 118 (332)
+-.-... .+.+..+.+.|+..|.+--+..| .+.++++ ++. +..|..-..
T Consensus 89 ~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~ 168 (287)
T 3b8i_A 89 ADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVD 168 (287)
T ss_dssp CTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHH
Confidence 4221111 23455667789999988533211 2444444 333 456664332
Q ss_pred -CHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe-ecCcCCHHHHHHHHHcCcceeeecc
Q 020013 119 -SFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA-AGGIVDARGYVAALSLGAQGICLGT 196 (332)
Q Consensus 119 -s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia-aGGI~~~~~v~~al~~GA~gV~~GT 196 (332)
.++.++...++|+|.|++++. ++...+.++.+.+ ++|++. .||-...-++.+.-++|..-|..|.
T Consensus 169 ~ai~Ra~ay~eAGAd~i~~e~~----------~~~~~~~~i~~~~---~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~ 235 (287)
T 3b8i_A 169 AVIQRTLAYQEAGADGICLVGV----------RDFAHLEAIAEHL---HIPLMLVTYGNPQLRDDARLARLGVRVVVNGH 235 (287)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC----------CSHHHHHHHHTTC---CSCEEEECTTCGGGCCHHHHHHTTEEEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEecCC----------CCHHHHHHHHHhC---CCCEEEeCCCCCCCCCHHHHHHcCCcEEEECh
Confidence 233455677899999999643 2346677888777 789883 3444333456777789999999987
Q ss_pred cccc
Q 020013 197 RFVA 200 (332)
Q Consensus 197 ~fl~ 200 (332)
..+.
T Consensus 236 ~~~r 239 (287)
T 3b8i_A 236 AAYF 239 (287)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 233
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=95.43 E-value=0.051 Score=49.23 Aligned_cols=76 Identities=17% Similarity=0.136 Sum_probs=59.4
Q ss_pred EEEEecCCHHHHHHHHHcCCCEEEEe-c-----CCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHH
Q 020013 112 KVVPQVGSFDEARKAVNAGVDAIIVQ-G-----REAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL 185 (332)
Q Consensus 112 ~v~~~v~s~~~a~~a~~~g~D~ivv~-G-----~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al 185 (332)
-++..+.+++.|+.+.+.|+|.|.+- . .-.||.. ....+..|.++++.+ ++||++-+++..-+.+..+.
T Consensus 23 gv~~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~--R~~~~~~i~~i~~~v---~iPvl~k~~i~~ide~qil~ 97 (297)
T 4adt_A 23 GVIMDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVA--RSVDPLKIEEIRKCI---SINVLAKVRIGHFVEAQILE 97 (297)
T ss_dssp CEEEEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCC--CCCCHHHHHHHHTTC---CSEEEEEEETTCHHHHHHHH
T ss_pred CcccCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcc--cCCCHHHHHHHHHhc---CCCEEEeccCCcHHHHHHHH
Confidence 36678899999999999999999874 1 1234411 123577888998887 89999999998888888888
Q ss_pred HcCccee
Q 020013 186 SLGAQGI 192 (332)
Q Consensus 186 ~~GA~gV 192 (332)
++|||.|
T Consensus 98 aaGAD~I 104 (297)
T 4adt_A 98 ELKVDML 104 (297)
T ss_dssp HTTCSEE
T ss_pred HcCCCEE
Confidence 9999999
No 234
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=95.41 E-value=0.06 Score=47.46 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=67.7
Q ss_pred EecCCHHHHHHHHHcCCCEEEE-ecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe-----ecCcCCH--------HH
Q 020013 115 PQVGSFDEARKAVNAGVDAIIV-QGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA-----AGGIVDA--------RG 180 (332)
Q Consensus 115 ~~v~s~~~a~~a~~~g~D~ivv-~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia-----aGGI~~~--------~~ 180 (332)
..+.|++.+..|++.|+|-|=+ .+...||.+ +++.++..+++.+ ++||.+ .|+.... +|
T Consensus 6 vc~~s~~~a~~A~~~GAdRIELc~~L~~GGlT----PS~g~i~~~~~~~---~ipv~vMIRPR~GdF~Ys~~E~~~M~~D 78 (256)
T 1twd_A 6 ICCYSMECALTAQQNGADRVELCAAPKEGGLT----PSLGVLKSVRQRV---TIPVHPIIRPRGGDFCYSDGEFAAILED 78 (256)
T ss_dssp EEESSHHHHHHHHHTTCSEEEECBCGGGTCBC----CCHHHHHHHHHHC---CSCEEEBCCSSSSCSCCCHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHcCCCEEEEcCCcccCCCC----CCHHHHHHHHHHc---CCceEEEECCCCCCCcCCHHHHHHHHHH
Confidence 4578999999999999999976 444556654 5577778887776 788765 4444332 35
Q ss_pred HHHHHHcCcceeeeccccccCccCCCCHHHHHHHhc-CCCce
Q 020013 181 YVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVE-MDKTE 221 (332)
Q Consensus 181 v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~~-~~~t~ 221 (332)
+..+..+|||||++|-- +++-.+....-+.+++ +++..
T Consensus 79 i~~~~~~GadGvV~G~L---t~dg~iD~~~~~~Li~~a~~~~ 117 (256)
T 1twd_A 79 VRTVRELGFPGLVTGVL---DVDGNVDMPRMEKIMAAAGPLA 117 (256)
T ss_dssp HHHHHHTTCSEEEECCB---CTTSSBCHHHHHHHHHHHTTSE
T ss_pred HHHHHHcCCCEEEEeeE---CCCCCcCHHHHHHHHHHhCCCc
Confidence 66777899999999943 6666677666555554 45443
No 235
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.41 E-value=0.19 Score=48.78 Aligned_cols=110 Identities=17% Similarity=0.176 Sum_probs=73.9
Q ss_pred CCcHHHHHHHHhCCCceeec--CCCCCCHHHHHHHHHHHHhhc-CCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc---
Q 020013 22 ISGPELVAAVANAGGLGLLR--APDWEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW--- 95 (332)
Q Consensus 22 ~s~~~la~avs~aGglG~i~--~~~~~~~e~~~~~i~~~r~~~-~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~--- 95 (332)
..+.+.+.++.++|. .++. .. ...++.+.+.++++++.. +.|+.++-.. ..+..+.+.+.|+|+|.+..
T Consensus 228 ~~~~~~a~~l~~aG~-d~I~id~a-~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~---t~e~a~~l~~aGaD~I~vg~g~G 302 (490)
T 4avf_A 228 ADTGERVAALVAAGV-DVVVVDTA-HGHSKGVIERVRWVKQTFPDVQVIGGNIA---TAEAAKALAEAGADAVKVGIGPG 302 (490)
T ss_dssp TTHHHHHHHHHHTTC-SEEEEECS-CCSBHHHHHHHHHHHHHCTTSEEEEEEEC---SHHHHHHHHHTTCSEEEECSSCS
T ss_pred cchHHHHHHHhhccc-ceEEeccc-CCcchhHHHHHHHHHHHCCCceEEEeeeC---cHHHHHHHHHcCCCEEEECCCCC
Confidence 345788888888863 3332 21 123455677888888765 5677664222 25677888999999998731
Q ss_pred -----------CCCcHHHHH----HHHhCCCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 96 -----------GEYSEELVL----EAHSAGVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 96 -----------g~~~~~~i~----~~~~~g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
|.+....+. .+++.+++|++ .+.+.+++.+++.+|+|+|.+
T Consensus 303 s~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~v 360 (490)
T 4avf_A 303 SICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMM 360 (490)
T ss_dssp TTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred cCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeee
Confidence 222222223 33345899997 588999999999999999998
No 236
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=95.27 E-value=0.28 Score=43.82 Aligned_cols=145 Identities=16% Similarity=0.172 Sum_probs=89.7
Q ss_pred cceecCCCCCCCCcHHHHHHHHhCCCceeecCC--------C-----CCCHHHHHHHHHHHHhhcCCcEEE-Eeec-CCC
Q 020013 11 YGIVQAPLGPDISGPELVAAVANAGGLGLLRAP--------D-----WEAPDYLRDLIRKTRSLTERPFGV-GVVL-AFP 75 (332)
Q Consensus 11 ~Pii~apM~~g~s~~~la~avs~aGglG~i~~~--------~-----~~~~e~~~~~i~~~r~~~~~p~gv-nl~~-~~~ 75 (332)
-||+ |. +.-|...|..+.++|. ..|..+ + ..+.+++....+.++..++.|+-+ .+-. ...
T Consensus 34 ~~i~---~~-tayDa~sA~l~e~aG~-d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~ 108 (281)
T 1oy0_A 34 HKWA---ML-TAYDYSTARIFDEAGI-PVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYE 108 (281)
T ss_dssp CCEE---EE-ECCSHHHHHHHHTTTC-CEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSST
T ss_pred CcEE---EE-eCcCHHHHHHHHHcCC-CEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCccc
Confidence 4665 32 4668888888888863 222111 1 235666666677776666666554 3222 111
Q ss_pred -C-HH----HHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEecC-----------------C------HHHHHHH
Q 020013 76 -H-NE----NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVG-----------------S------FDEARKA 126 (332)
Q Consensus 76 -~-~~----~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v~-----------------s------~~~a~~a 126 (332)
. ++ ..+.+.+.|++.|.+-.|..-.+.++.+.+.|++|+..++ + .++++..
T Consensus 109 ~s~~~a~~na~rl~~eaGa~aVklEdg~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~ 188 (281)
T 1oy0_A 109 AGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAV 188 (281)
T ss_dssp TCHHHHHHHHHHHHHTTCCSEEEEEBSGGGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCeEEEECCcHHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHH
Confidence 1 22 2445556899999986454456788888889998872210 1 1244456
Q ss_pred HHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecC
Q 020013 127 VNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGG 174 (332)
Q Consensus 127 ~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGG 174 (332)
+++|+|.|++++. + ..+..++.+.+ ++|+|..|.
T Consensus 189 ~eAGA~~ivlE~v----------p-~~~a~~it~~l---~iP~igIGa 222 (281)
T 1oy0_A 189 AEAGAFAVVMEMV----------P-AELATQITGKL---TIPTVGIGA 222 (281)
T ss_dssp HHHTCSEEEEESC----------C-HHHHHHHHHHC---SSCEEEESS
T ss_pred HHcCCcEEEEecC----------C-HHHHHHHHHhC---CCCEEEeCC
Confidence 7899999999753 1 24677888887 799997553
No 237
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=95.25 E-value=0.074 Score=47.00 Aligned_cols=119 Identities=16% Similarity=0.207 Sum_probs=71.9
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHH----HHHHHhCCCEEEEecCC-HHH-------------HHHHH-HcCCC
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEEL----VLEAHSAGVKVVPQVGS-FDE-------------ARKAV-NAGVD 132 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~----i~~~~~~g~~v~~~v~s-~~~-------------a~~a~-~~g~D 132 (332)
....+.+.|++++.++ |+. ..+. ++...+.|+.++..++. .++ .+.++ ....+
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~ 157 (255)
T 1tre_A 79 SAAMLKDIGAQYIIIGHSERRTYHKE-SDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAA 157 (255)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGG
T ss_pred CHHHHHHcCCCEEEECccccccccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHH
Confidence 4567788999999985 454 3444 44566789998888873 332 11111 12333
Q ss_pred ----EEEE-ecCCCCcccCCCCch-------hhhHHHHHHHhC---CCCCcEEeecCcCCHHHHHHHHH-cCcceeeecc
Q 020013 133 ----AIIV-QGREAGGHVIGQDGL-------ISLLPMVVDLIG---DRDIPIIAAGGIVDARGYVAALS-LGAQGICLGT 196 (332)
Q Consensus 133 ----~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~~~~---~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~GT 196 (332)
.||+ +..-+=|. |...+ ...+++....+. ..+++|+..|+| +++|+.+.++ .+.||+.+|+
T Consensus 158 ~~~~vvIAYEPvWAIGT--G~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGg 234 (255)
T 1tre_A 158 AFEGAVIAYEPVWAIGT--GKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSV-NASNAAELFAQPDIDGALVGG 234 (255)
T ss_dssp GGTTCEEEECCGGGSSS--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSCC-CTTTHHHHHTSTTCCEEEESG
T ss_pred HcCcEEEEECCHHHhCC--CCCCCHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCC-CHHHHHHHHcCCCCCeeEecH
Confidence 3443 44444443 11121 223333211110 015899999999 7889999998 7999999999
Q ss_pred ccccC
Q 020013 197 RFVAS 201 (332)
Q Consensus 197 ~fl~t 201 (332)
+-+..
T Consensus 235 AsL~a 239 (255)
T 1tre_A 235 ASLKA 239 (255)
T ss_dssp GGGCH
T ss_pred HHhCh
Confidence 97754
No 238
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=95.20 E-value=0.26 Score=42.65 Aligned_cols=100 Identities=13% Similarity=0.089 Sum_probs=65.5
Q ss_pred cEEEEcc--C-CC-cHHHHHHHHhCCCEEE--EecCC--------HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhh
Q 020013 89 AVLQVSW--G-EY-SEELVLEAHSAGVKVV--PQVGS--------FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISL 154 (332)
Q Consensus 89 ~~I~~~~--g-~~-~~~~i~~~~~~g~~v~--~~v~s--------~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~l 154 (332)
|++.+|. | .. -...++.+++.+..|+ ...++ .+-++.+.++|+|++++.+ +. ..-
T Consensus 80 d~vTVh~~~G~~~~~~~a~~~~~~~~~~v~vLts~s~~~~~~~~~~~~a~~a~~~g~~GvV~sa-----t~------p~e 148 (222)
T 4dbe_A 80 NSFIAHSFIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWSTLFADYIKNVIREISPKGIVVGG-----TK------LDH 148 (222)
T ss_dssp SEEEEESTTCTTTTHHHHHHHHHHTTCEEEEEEECSSTTCCCTTHHHHHHHHHHHCCSEEEECT-----TC------HHH
T ss_pred CEEEEEcCcCcHHHHHHHHHHHHhcCCcEEEEEeCCCcchHHHHHHHHHHHHHHhCCCEEEECC-----CC------HHH
Confidence 8988873 3 21 2234444554444443 33333 4566778889999999832 11 123
Q ss_pred HHHHHHHhCCCCCcEEeecCcCCHH--HHHHHHHcCcceeeeccccccCcc
Q 020013 155 LPMVVDLIGDRDIPIIAAGGIVDAR--GYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 155 l~~i~~~~~~~~iPviaaGGI~~~~--~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
++.+++..+ + .++..+||+ ++ +..+++..|+|.+++|..+..++.
T Consensus 149 ~~~ir~~~~--~-~~~vtPGI~-~~g~tp~~a~~~Gad~iVVGR~I~~A~d 195 (222)
T 4dbe_A 149 ITQYRRDFE--K-MTIVSPGMG-SQGGSYGDAVCAGADYEIIGRSIYNAGN 195 (222)
T ss_dssp HHHHHHHCT--T-CEEEECCBS-TTSBCTTHHHHHTCSEEEECHHHHTSSS
T ss_pred HHHHHHhCC--C-CEEEcCCcc-cCccCHHHHHHcCCCEEEECHHhcCCCC
Confidence 455666553 4 688899995 44 577889999999999999998754
No 239
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=95.19 E-value=0.15 Score=45.10 Aligned_cols=119 Identities=18% Similarity=0.170 Sum_probs=72.0
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHH----HHHHHhCCCEEEEecC-CHHH-------------HHHHH-Hc-CC
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEEL----VLEAHSAGVKVVPQVG-SFDE-------------ARKAV-NA-GV 131 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~----i~~~~~~g~~v~~~v~-s~~~-------------a~~a~-~~-g~ 131 (332)
....+.+.|++++.++ |+. ..++ ++.+.+.|+.++..++ +.++ .+.++ .. .+
T Consensus 80 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~ 158 (257)
T 2yc6_A 80 SVEMLQDMGLKHVIVGHSERRRIMGE-TDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGES 158 (257)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHcCCCEEEECchhhccccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCCh
Confidence 4567888999999985 454 3332 3445678999888887 3332 11112 12 33
Q ss_pred C-----EEEE-ecCCCCcccCCCCch-------hhhHHHHHHH-hC---CCCCcEEeecCcCCHHHHHHHHHc-Ccceee
Q 020013 132 D-----AIIV-QGREAGGHVIGQDGL-------ISLLPMVVDL-IG---DRDIPIIAAGGIVDARGYVAALSL-GAQGIC 193 (332)
Q Consensus 132 D-----~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~~-~~---~~~iPviaaGGI~~~~~v~~al~~-GA~gV~ 193 (332)
+ .|++ +..-+=|. |...+ ...+++.... +. ..+++|+..|+| +++|+.+.++. +.||+.
T Consensus 159 ~~~~~~vvIAYEPvWAIGT--G~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~L 235 (257)
T 2yc6_A 159 KMLWKEVVIAYEPVWSIGT--GVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSA-NGSNNEKLGQCPNIDGFL 235 (257)
T ss_dssp HHHHHTEEEEECCGGGTTT--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSC-CTTTHHHHHTSTTCCEEE
T ss_pred hhccCCEEEEECCHHHhCC--CCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCcc-CHHHHHHHHcCCCCCeee
Confidence 3 3444 44444443 12122 2233332111 10 026899999999 78899999987 999999
Q ss_pred eccccccC
Q 020013 194 LGTRFVAS 201 (332)
Q Consensus 194 ~GT~fl~t 201 (332)
+|++-+..
T Consensus 236 VGgAsL~a 243 (257)
T 2yc6_A 236 VGGASLKP 243 (257)
T ss_dssp ESGGGGST
T ss_pred ecHHHHHH
Confidence 99997754
No 240
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=95.10 E-value=0.033 Score=49.51 Aligned_cols=109 Identities=20% Similarity=0.285 Sum_probs=63.4
Q ss_pred HHHHHHhcCCcEEEEcc-------CCCc--HHHHHH----HHhCCC--EEEEec---CCHH----HHHHHHHcCCCEEEE
Q 020013 79 NIKAILSEKVAVLQVSW-------GEYS--EELVLE----AHSAGV--KVVPQV---GSFD----EARKAVNAGVDAIIV 136 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~-------g~~~--~~~i~~----~~~~g~--~v~~~v---~s~~----~a~~a~~~g~D~ivv 136 (332)
..+.+++.|++-|.+.. |... .+.++. +++.+. ||+... ++.+ ..+.+.++|+|+|..
T Consensus 90 E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVKT 169 (260)
T 1p1x_A 90 ETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKT 169 (260)
T ss_dssp HHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEEe
Confidence 35667888999887642 2211 112222 233344 345332 3433 234467899999987
Q ss_pred e-cCCCCcccCCCCchhhhHHHHHHHhC-CCCCcEEeecCcCCHHHHHHHHHcCcc
Q 020013 137 Q-GREAGGHVIGQDGLISLLPMVVDLIG-DRDIPIIAAGGIVDARGYVAALSLGAQ 190 (332)
Q Consensus 137 ~-G~eaGGh~~~~~~~~~ll~~i~~~~~-~~~iPviaaGGI~~~~~v~~al~~GA~ 190 (332)
. |+..||- ......++.++.+... ..+++|-++|||.+.+++.+++.+|++
T Consensus 170 STGf~~~gA---t~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 170 STGKVAVNA---TPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp CCSCSSCCC---CHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCC---CHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 3 5543332 1222334444433211 237999999999999999999999876
No 241
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.88 E-value=0.32 Score=41.20 Aligned_cols=122 Identities=11% Similarity=0.108 Sum_probs=78.1
Q ss_pred ccceecCCCCCCCCcHHH-HHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCC
Q 020013 10 EYGIVQAPLGPDISGPEL-VAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKV 88 (332)
Q Consensus 10 ~~Pii~apM~~g~s~~~l-a~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~ 88 (332)
+.||....|. ...++. +....++|.=+++... ....+.+.+.++.+++. +.++.+.+.......+.++.+.+.++
T Consensus 53 ~~~i~~~~~~--~~~~~~~~~~~~~~Gad~v~v~~-~~~~~~~~~~~~~~~~~-g~~~~v~~~~~~t~~~~~~~~~~~g~ 128 (211)
T 3f4w_A 53 HKEVLADAKI--MDGGHFESQLLFDAGADYVTVLG-VTDVLTIQSCIRAAKEA-GKQVVVDMICVDDLPARVRLLEEAGA 128 (211)
T ss_dssp TSEEEEEEEE--CSCHHHHHHHHHHTTCSEEEEET-TSCHHHHHHHHHHHHHH-TCEEEEECTTCSSHHHHHHHHHHHTC
T ss_pred CCEEEEEEEe--ccchHHHHHHHHhcCCCEEEEeC-CCChhHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHHcCC
Confidence 5688777775 234444 7778888876665432 22345667777777765 34444433222222356778888999
Q ss_pred cEEEEccC-------CCcHHHHHHHHhC--CCEEEEe--cCCHHHHHHHHHcCCCEEEE
Q 020013 89 AVLQVSWG-------EYSEELVLEAHSA--GVKVVPQ--VGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 89 ~~I~~~~g-------~~~~~~i~~~~~~--g~~v~~~--v~s~~~a~~a~~~g~D~ivv 136 (332)
++|.++-| ....+.++++++. +++++.. + +.+.+..+.+.|+|++++
T Consensus 129 d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI-~~~~~~~~~~~Gad~vvv 186 (211)
T 3f4w_A 129 DMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGI-SSQTVKDYALLGPDVVIV 186 (211)
T ss_dssp CEEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSC-CTTTHHHHHTTCCSEEEE
T ss_pred CEEEEcCCCcccccCCCCHHHHHHHHHHcCCCcEEEECCC-CHHHHHHHHHcCCCEEEE
Confidence 99987533 1134667777763 6776543 4 478888899999999998
No 242
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=94.88 E-value=0.45 Score=41.25 Aligned_cols=108 Identities=19% Similarity=0.123 Sum_probs=73.5
Q ss_pred cHHHHHHHHhCCCceee-cCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc-cC-----
Q 020013 24 GPELVAAVANAGGLGLL-RAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS-WG----- 96 (332)
Q Consensus 24 ~~~la~avs~aGglG~i-~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~-~g----- 96 (332)
+.+.+..+.++|.=.++ ......+|+.+.+.++.+++. +.++.+++. ..+..+.+.+.|+|+|.+. .|
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~-g~~v~~~v~----t~eea~~a~~~Gad~Ig~~~~g~t~~~ 164 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH-GLLAMADCS----TVNEGISCHQKGIEFIGTTLSGYTGPI 164 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-TCEEEEECS----SHHHHHHHHHTTCSEEECTTTTSSSSC
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC-CCEEEEecC----CHHHHHHHHhCCCCEEEecCccCCCCC
Confidence 34456666677753322 221223567778888888874 455665543 2566778889999999642 11
Q ss_pred ---CCcHHHHHHHHhCCCEEEEe--cCCHHHHHHHHHcCCCEEEE
Q 020013 97 ---EYSEELVLEAHSAGVKVVPQ--VGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 97 ---~~~~~~i~~~~~~g~~v~~~--v~s~~~a~~a~~~g~D~ivv 136 (332)
.+..++++.+++.+++++.. +.+++++.++.+.|+|+|++
T Consensus 165 ~~~~~~~~li~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~V 209 (229)
T 3q58_A 165 TPVEPDLAMVTQLSHAGCRVIAEGRYNTPALAANAIEHGAWAVTV 209 (229)
T ss_dssp CCSSCCHHHHHHHHTTTCCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred cCCCCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 13346777777668888865 77999999999999999999
No 243
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=94.88 E-value=0.52 Score=40.60 Aligned_cols=105 Identities=11% Similarity=0.095 Sum_probs=70.0
Q ss_pred HHHHHHHhcCCcEEEEccCCCcHHHHHHHHhC-CCEEEEe-----------c-CCHHHHHHHHHcCCCEEEEecCCCCcc
Q 020013 78 ENIKAILSEKVAVLQVSWGEYSEELVLEAHSA-GVKVVPQ-----------V-GSFDEARKAVNAGVDAIIVQGREAGGH 144 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~-g~~v~~~-----------v-~s~~~a~~a~~~g~D~ivv~G~eaGGh 144 (332)
+.++.+.+.|++.+++. ..+.++.+++. +++++.. + .+.+++..+.+.|+|.|.+.... -.+
T Consensus 40 ~~a~~~~~~G~~~i~~~----~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~-~~~ 114 (234)
T 1yxy_A 40 LMAKAAQEAGAVGIRAN----SVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTK-RDR 114 (234)
T ss_dssp HHHHHHHHHTCSEEEEE----SHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCS-SCC
T ss_pred HHHHHHHHCCCcEeecC----CHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccc-cCC
Confidence 45666777899998875 23567777653 5666421 1 25678889999999999885421 111
Q ss_pred cCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCccee
Q 020013 145 VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGI 192 (332)
Q Consensus 145 ~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV 192 (332)
. .......++..+++..+ +.+++. ++.+.+++..+..+|+|.|
T Consensus 115 ~-~~~~~~~~i~~i~~~~~--~~~v~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 115 H-DGLDIASFIRQVKEKYP--NQLLMA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp T-TCCCHHHHHHHHHHHCT--TCEEEE--ECSSHHHHHHHHHTTCSEE
T ss_pred C-CCccHHHHHHHHHHhCC--CCeEEE--eCCCHHHHHHHHHcCCCEE
Confidence 1 00133567777777652 455544 7889999999999999998
No 244
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=94.88 E-value=0.76 Score=40.51 Aligned_cols=178 Identities=16% Similarity=0.126 Sum_probs=105.1
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCC---------cee-ecCC--CCCCHHHHHHHHHHHHhhcCCcEEEEe
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGG---------LGL-LRAP--DWEAPDYLRDLIRKTRSLTERPFGVGV 70 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGg---------lG~-i~~~--~~~~~e~~~~~i~~~r~~~~~p~gvnl 70 (332)
|.+++.-.-||+ |. +.-+.-.+..+.++|. ++. ++.+ ...+.+++....+.+...++.|+-+.+
T Consensus 12 lr~l~~~~~~i~---~~-~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~ 87 (255)
T 2qiw_A 12 FASDHESGKLLV---LP-TVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVSIPVSVDV 87 (255)
T ss_dssp HHHHHHTCCCEE---CC-EESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred HHHHHhCCCcEE---Ee-cCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEecc
Confidence 344454345666 32 5678888888888862 111 1111 124667777777777766677776654
Q ss_pred ecCCCC--HHHHHHHHhcCCcEEEEccCC--------CcHHHH---HHHHhC----CCE--EEEecCC-----------H
Q 020013 71 VLAFPH--NENIKAILSEKVAVLQVSWGE--------YSEELV---LEAHSA----GVK--VVPQVGS-----------F 120 (332)
Q Consensus 71 ~~~~~~--~~~~~~~~~~~~~~I~~~~g~--------~~~~~i---~~~~~~----g~~--v~~~v~s-----------~ 120 (332)
-.-... .+.+..+.+.|+..|.+--+. +..+.+ +.+++. |++ |+..... .
T Consensus 88 ~~Gyg~~~~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~ 167 (255)
T 2qiw_A 88 ESGYGLSPADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPM 167 (255)
T ss_dssp TTCTTCCHHHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHH
T ss_pred CCCcCcHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHH
Confidence 322111 455667778999999874221 112344 444444 776 5543332 2
Q ss_pred H----HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeec--CcCCH-HHHHHHHHcCcceee
Q 020013 121 D----EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAG--GIVDA-RGYVAALSLGAQGIC 193 (332)
Q Consensus 121 ~----~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaG--GI~~~-~~v~~al~~GA~gV~ 193 (332)
+ .++..+++|+|.|++++. ++..++.++.+.+ ++|+.... |-.++ -++.++-++|..-|.
T Consensus 168 ~~ai~ra~a~~eAGAd~i~~e~~----------~~~~~~~~i~~~~---~~P~n~~~~~~~~~p~~~~~eL~~lGv~~v~ 234 (255)
T 2qiw_A 168 VEAIKRIKLMEQAGARSVYPVGL----------STAEQVERLVDAV---SVPVNITAHPVDGHGAGDLATLAGLGVRRVT 234 (255)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCC----------CSHHHHHHHHTTC---SSCBEEECBTTTBBTTBCHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEcCC----------CCHHHHHHHHHhC---CCCEEEEecCCCCCCCCCHHHHHHcCCCEEE
Confidence 2 344567899999999543 2346677887777 67766542 21011 345677789999999
Q ss_pred eccc
Q 020013 194 LGTR 197 (332)
Q Consensus 194 ~GT~ 197 (332)
.|..
T Consensus 235 ~~~~ 238 (255)
T 2qiw_A 235 FGPL 238 (255)
T ss_dssp CTTH
T ss_pred EHHH
Confidence 9877
No 245
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=94.84 E-value=0.26 Score=43.60 Aligned_cols=127 Identities=20% Similarity=0.185 Sum_probs=74.8
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHH----HHHHHhCCCEEEEecCCHHH--------------HHHHHH---cC
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEEL----VLEAHSAGVKVVPQVGSFDE--------------ARKAVN---AG 130 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~----i~~~~~~g~~v~~~v~s~~~--------------a~~a~~---~g 130 (332)
....+.+.|++++.++ |+. ..++ ++.+.+.|+.++..++...+ .+..++ .-
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pIvCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~ 156 (259)
T 2i9e_A 78 SPAMIKDVGADWVILGHSERRQIFGE-SDELIAEKVCHALESGLKVIACIGETLEEREAGKTEEVVFRQTKAIAAKVNDW 156 (259)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CHHHHHHcCCCEEEECchhhhhhcCC-CHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcchhh
Confidence 4567888999999985 454 2333 23455689998888874322 222221 11
Q ss_pred CCEEEE-ecCCCCcccCCCCchh-------hhHHHHHHH-hC---CCCCcEEeecCcCCHHHHHHHHH-cCcceeeeccc
Q 020013 131 VDAIIV-QGREAGGHVIGQDGLI-------SLLPMVVDL-IG---DRDIPIIAAGGIVDARGYVAALS-LGAQGICLGTR 197 (332)
Q Consensus 131 ~D~ivv-~G~eaGGh~~~~~~~~-------~ll~~i~~~-~~---~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~GT~ 197 (332)
...|++ +..-+=|. |...+. ..+++.... +. ..+++|+..|+| +++|+.+.+. .+.||+.+|++
T Consensus 157 ~~~vIAYEPvWAIGT--G~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgA 233 (259)
T 2i9e_A 157 SNVVIAYEPVWAIGT--GKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSV-TAANCKELASQPDIDGFLVGGA 233 (259)
T ss_dssp TTEEEEECCGGGTTS--SSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCC-CTTTHHHHHTSTTCCEEEESGG
T ss_pred cCEEEEEcCHHHcCC--CCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCC-CHhhHHHHhcCCCCCeeeechH
Confidence 234444 44444443 222222 223321111 10 014899999999 8899988886 68999999999
Q ss_pred cccCccCCCCHHHHHHHh
Q 020013 198 FVASEESYAHPEYKRKLV 215 (332)
Q Consensus 198 fl~t~Es~~~~~~k~~~~ 215 (332)
-+.. +.|.+.+.
T Consensus 234 sL~a------~~F~~Ii~ 245 (259)
T 2i9e_A 234 SLKP------EFVDIINA 245 (259)
T ss_dssp GGST------HHHHHHTT
T ss_pred hhCh------HHHHHHHH
Confidence 7754 45665543
No 246
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=94.82 E-value=0.43 Score=43.03 Aligned_cols=106 Identities=19% Similarity=0.286 Sum_probs=71.2
Q ss_pred HHHHHHhcCCcEEE----EccCCCcH--------HHHHHHHhCCCEEEEe--c-----------CCHHH----HHHHHHc
Q 020013 79 NIKAILSEKVAVLQ----VSWGEYSE--------ELVLEAHSAGVKVVPQ--V-----------GSFDE----ARKAVNA 129 (332)
Q Consensus 79 ~~~~~~~~~~~~I~----~~~g~~~~--------~~i~~~~~~g~~v~~~--v-----------~s~~~----a~~a~~~ 129 (332)
.++.++..|+|.+. +..|.+.+ ++++.+++.|++++.. + .+++. ++.+.+.
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaEL 212 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGL 212 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTC
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHh
Confidence 46778888999976 33454322 3445567789887653 1 24443 3456788
Q ss_pred CCC----EEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCC--HHH----HHHHHH-cCcceeeecccc
Q 020013 130 GVD----AIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD--ARG----YVAALS-LGAQGICLGTRF 198 (332)
Q Consensus 130 g~D----~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~--~~~----v~~al~-~GA~gV~~GT~f 198 (332)
|+| +|.+.=+ .-+.++.+.. .+||+.+||=.. .++ +.+++. .||.|+.+|.-+
T Consensus 213 GADs~~tivK~~y~-------------e~f~~Vv~a~---~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNI 276 (307)
T 3fok_A 213 GNDSSYTWMKLPVV-------------EEMERVMEST---TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTL 276 (307)
T ss_dssp SSCCSSEEEEEECC-------------TTHHHHGGGC---SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTT
T ss_pred CCCcCCCEEEeCCc-------------HHHHHHHHhC---CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhh
Confidence 999 8887322 1246666665 699999998763 334 456777 699999999888
Q ss_pred cc
Q 020013 199 VA 200 (332)
Q Consensus 199 l~ 200 (332)
+.
T Consensus 277 fQ 278 (307)
T 3fok_A 277 LY 278 (307)
T ss_dssp SS
T ss_pred cc
Confidence 77
No 247
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=94.77 E-value=1.2 Score=38.43 Aligned_cols=117 Identities=19% Similarity=0.285 Sum_probs=71.9
Q ss_pred HHHHHHhcCCcEEEEcc----CCCcHHHHHHHHh--CCCEEE-E----ec--CCHHHHH-HHHHcCCCEEEEecCCCCcc
Q 020013 79 NIKAILSEKVAVLQVSW----GEYSEELVLEAHS--AGVKVV-P----QV--GSFDEAR-KAVNAGVDAIIVQGREAGGH 144 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~----g~~~~~~i~~~~~--~g~~v~-~----~v--~s~~~a~-~a~~~g~D~ivv~G~eaGGh 144 (332)
.++.+.+.|++.|.+++ |....+..+++.+ .+.++. + .+ .++.++. .+.+.|+|-|+-.|. .
T Consensus 81 Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~----~ 156 (224)
T 2bdq_A 81 DILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGS----S 156 (224)
T ss_dssp HHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSC----S
T ss_pred HHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCCC----C
Confidence 45677889999998864 2223344444432 356654 2 23 4555554 466889999997543 2
Q ss_pred cCC--CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHH-HcCcceeeeccccccCcc
Q 020013 145 VIG--QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL-SLGAQGICLGTRFVASEE 203 (332)
Q Consensus 145 ~~~--~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al-~~GA~gV~~GT~fl~t~E 203 (332)
. . ....+..|+++.+.... ++-|++.||| +.+|+.+.+ ..|++.+= +|.+..-.-
T Consensus 157 ~-~~~a~~g~~~L~~Lv~~a~~-ri~Im~GgGV-~~~Ni~~l~~~tGv~e~H-~s~i~~~~~ 214 (224)
T 2bdq_A 157 N-GEPIIENIKHIKALVEYANN-RIEIMVGGGV-TAENYQYICQETGVKQAH-GTRITQMAG 214 (224)
T ss_dssp S-CCCGGGGHHHHHHHHHHHTT-SSEEEECSSC-CTTTHHHHHHHHTCCEEE-ETTCC----
T ss_pred C-CCcHHHHHHHHHHHHHhhCC-CeEEEeCCCC-CHHHHHHHHHhhCCCEEc-cccccCCCC
Confidence 2 2 12335666676665432 6889999999 889999988 58988776 354444333
No 248
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=94.73 E-value=0.25 Score=44.71 Aligned_cols=90 Identities=9% Similarity=0.073 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHHhhcCCcEEEEeecCCCCHH---HHHHHHhcCCcEEEEccCC--------------------------
Q 020013 47 APDYLRDLIRKTRSLTERPFGVGVVLAFPHNE---NIKAILSEKVAVLQVSWGE-------------------------- 97 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~---~~~~~~~~~~~~I~~~~g~-------------------------- 97 (332)
+++.+.+.++.+|+.++.|+.+.+-.....++ ..+.+.+.|+|+|.++...
T Consensus 142 ~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg 221 (311)
T 1jub_A 142 DFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGG 221 (311)
T ss_dssp CHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEES
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccc
Confidence 67888899999998888899887654332222 2556677899998765210
Q ss_pred Cc-----HHHHHHHHhC---CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 98 YS-----EELVLEAHSA---GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 98 ~~-----~~~i~~~~~~---g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
.+ .++++.+++. .++|+. .+.+.+++.+++..|+|.|.+
T Consensus 222 ~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~v 270 (311)
T 1jub_A 222 AYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQI 270 (311)
T ss_dssp GGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred ccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 00 2456666654 678875 477999999999999999988
No 249
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=94.73 E-value=0.082 Score=46.61 Aligned_cols=118 Identities=23% Similarity=0.315 Sum_probs=71.1
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHH----HHHHHhCCCEEEEecCC-HHHH-------------HHHHHcCC--
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEEL----VLEAHSAGVKVVPQVGS-FDEA-------------RKAVNAGV-- 131 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~----i~~~~~~g~~v~~~v~s-~~~a-------------~~a~~~g~-- 131 (332)
....+.+.|++++.++ |+. ..+. ++.+.+.|+.++..++. .++- ..++ .+.
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l-~~~~~ 155 (252)
T 2btm_A 78 SPVMLKDLGVTYVILGHSERRQMFAE-TDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKAL-AGLTP 155 (252)
T ss_dssp CHHHHHHHTCCEEEESCHHHHHHSCC-CHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHH-TTCCH
T ss_pred CHHHHHHcCCCEEEeCchhcccccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHH-hcCCH
Confidence 4567788999999985 454 3444 44556679998888873 3311 1122 232
Q ss_pred C----EEEE-ecCCCCcccCCCCc-------hhhhHHHHHHH-hC---CCCCcEEeecCcCCHHHHHHHH-HcCcceeee
Q 020013 132 D----AIIV-QGREAGGHVIGQDG-------LISLLPMVVDL-IG---DRDIPIIAAGGIVDARGYVAAL-SLGAQGICL 194 (332)
Q Consensus 132 D----~ivv-~G~eaGGh~~~~~~-------~~~ll~~i~~~-~~---~~~iPviaaGGI~~~~~v~~al-~~GA~gV~~ 194 (332)
+ .+|+ +..-+=|. |... ....+++.... +. ..+++|+..|+| +++|+.+.+ ..+.||+.+
T Consensus 156 ~~~~~~vIAYEPvWAIGT--G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LV 232 (252)
T 2btm_A 156 EQVKQAVIAYEPIWAIGT--GKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSV-KPDNIRDFLAQQQIDGALV 232 (252)
T ss_dssp HHHTTCEEEECCGGGTTT--SCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSC-CTTTHHHHHTSTTCCEEEE
T ss_pred HHcCCEEEEECCHHHhCC--CCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCC-CHHHHHHHHcCCCCCeeEe
Confidence 2 3444 44444332 1112 22333332211 11 026899999999 789999999 579999999
Q ss_pred ccccccC
Q 020013 195 GTRFVAS 201 (332)
Q Consensus 195 GT~fl~t 201 (332)
|++-+..
T Consensus 233 GgAsL~a 239 (252)
T 2btm_A 233 GGASLEP 239 (252)
T ss_dssp SGGGSSH
T ss_pred cHHHhCh
Confidence 9997644
No 250
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=94.72 E-value=0.67 Score=42.78 Aligned_cols=134 Identities=17% Similarity=0.192 Sum_probs=83.7
Q ss_pred CHHHHHHHHhcCCcEEEEccCC-CcHHHHHHHHhCCCEEEEecC--CHHHHHHHH----HcCCCEEEEecCCCCcccCCC
Q 020013 76 HNENIKAILSEKVAVLQVSWGE-YSEELVLEAHSAGVKVVPQVG--SFDEARKAV----NAGVDAIIVQGREAGGHVIGQ 148 (332)
Q Consensus 76 ~~~~~~~~~~~~~~~I~~~~g~-~~~~~i~~~~~~g~~v~~~v~--s~~~a~~a~----~~g~D~ivv~G~eaGGh~~~~ 148 (332)
+.+.++.+.+.+++++.++.++ ....+++.+-+.|.+|+.+.+ |.+|...+. +.|.+.+++++.. +.. .+
T Consensus 113 d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s--~Yp-~~ 189 (349)
T 2wqp_A 113 SRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREAGVPYALLHCTN--IYP-TP 189 (349)
T ss_dssp SHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCC--CSS-CC
T ss_pred CHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccC--CCC-CC
Confidence 4678888888899999997443 234678888888999987643 777766554 4577999987542 111 11
Q ss_pred --CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccccCcc--------CCCCHHHHHHHhc
Q 020013 149 --DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE--------SYAHPEYKRKLVE 216 (332)
Q Consensus 149 --~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~t~E--------s~~~~~~k~~~~~ 216 (332)
...+..++.+++..+ ++||...+==....-..++.++||+ ++=..|-..+. |-.++++++.+.+
T Consensus 190 ~~~~nL~ai~~lk~~f~--~lpVg~sdHt~G~~~~~AAvAlGA~--iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ 263 (349)
T 2wqp_A 190 YEDVRLGGMNDLSEAFP--DAIIGLSDHTLDNYACLGAVALGGS--ILERHFTDRMDRPGPDIVCSMNPDTFKELKQG 263 (349)
T ss_dssp GGGCCTHHHHHHHHHCT--TSEEEEECCSSSSHHHHHHHHHTCC--EEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHCC--CCCEEeCCCCCcHHHHHHHHHhCCC--EEEeCCCccccCCCCChhhhCCHHHHHHHHHH
Confidence 123566888777642 4888765433223445677889999 33333332222 1235666666654
No 251
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=94.70 E-value=0.21 Score=43.52 Aligned_cols=118 Identities=15% Similarity=0.183 Sum_probs=72.0
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHH----HHHHHHhCCCEEEEecCCHHHHHHH-------------HHcC---C
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEE----LVLEAHSAGVKVVPQVGSFDEARKA-------------VNAG---V 131 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~----~i~~~~~~g~~v~~~v~s~~~a~~a-------------~~~g---~ 131 (332)
..+.+.+.|++.+.++ |+. ..+ -++.+.+.|+.++..++...+.+.+ .... .
T Consensus 73 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~~~t~~vv~~Ql~~l~~~~~ 151 (233)
T 2jgq_A 73 TSKHLEELKIHTLLIGHSERRTLLKE-SPSFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLSEQLENIDLNYP 151 (233)
T ss_dssp BHHHHHHTTCCEEEECCHHHHHTTCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHCHHHHHHHHHHHHTTSCTTCT
T ss_pred CHHHHHHcCCCEEEeCchhhhcccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCchhHHHHHHHHHHhhhhhcc
Confidence 3567888999999985 454 333 2345567899998888743222222 0111 1
Q ss_pred CEEEE-ecCCCCcccCCCCchhhhHHH----HHHHhCCCCCcEEeecCcCCHHHHHHHHH-cCcceeeeccccccC
Q 020013 132 DAIIV-QGREAGGHVIGQDGLISLLPM----VVDLIGDRDIPIIAAGGIVDARGYVAALS-LGAQGICLGTRFVAS 201 (332)
Q Consensus 132 D~ivv-~G~eaGGh~~~~~~~~~ll~~----i~~~~~~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~GT~fl~t 201 (332)
..+++ +...+=|. |...+...+.+ +++.+. .+++|+..|+| +++|+.+.+. .+.||+.+|++-+..
T Consensus 152 ~~vIAYEPvWAIGT--G~~At~e~a~ev~~~IR~~l~-~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgAsl~a 223 (233)
T 2jgq_A 152 NLVVAYEPIWAIGT--KKSASLEDIYLTHGFLKQILN-QKTPLLYGGSV-NTQNAKEILGIDSVDGLLIGSASWEL 223 (233)
T ss_dssp TEEEEECCGGGTTC----CCCHHHHHHHHHHHHHHSC-TTSCEEEESSC-CTTTHHHHHTSTTCCEEEESGGGGSH
T ss_pred ceEEEEeCHHHhCC--CCCCCHHHHHHHHHHHHHHHh-cCCcEEEcCCc-ChhhHHHHhcCCCCCeeEecHHHhCh
Confidence 34444 44444443 22233333333 333331 26899999999 7899988775 699999999997754
No 252
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=94.69 E-value=0.38 Score=37.94 Aligned_cols=85 Identities=12% Similarity=0.064 Sum_probs=61.5
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.+++.|..++..+.+.++|.... +..+|.|+++=.= ....-+.+++++++.-...++|||.-.+-.+.++..
T Consensus 30 ~~L~~~G~~~v~~a~~g~~al~~~~~~~~DlillD~~M------P~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~ 103 (134)
T 3to5_A 30 NLLRDLGFNNTQEADDGLTALPMLKKGDFDFVVTDWNM------PGMQGIDLLKNIRADEELKHLPVLMITAEAKREQII 103 (134)
T ss_dssp HHHHHTTCCCEEEESSHHHHHHHHHHHCCSEEEEESCC------SSSCHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHH
T ss_pred HHHHHcCCcEEEEECCHHHHHHHHHhCCCCEEEEcCCC------CCCCHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHH
Confidence 345667887666778888877654 4579999985321 112347788888754322379999999998999999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
+++.+||++...
T Consensus 104 ~~~~~Ga~~yl~ 115 (134)
T 3to5_A 104 EAAQAGVNGYIV 115 (134)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHCCCCEEEE
Confidence 999999998753
No 253
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.68 E-value=0.58 Score=40.62 Aligned_cols=108 Identities=20% Similarity=0.149 Sum_probs=73.1
Q ss_pred cHHHHHHHHhCCCceee-cCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc-cC-----
Q 020013 24 GPELVAAVANAGGLGLL-RAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS-WG----- 96 (332)
Q Consensus 24 ~~~la~avs~aGglG~i-~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~-~g----- 96 (332)
+.+.+..+.++|.=.++ ......+|+.+.+.++.+++. +.++.+++. ..+..+.+.+.|+|+|.++ .|
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~-g~~v~~~v~----t~eea~~a~~~Gad~Ig~~~~g~t~~~ 164 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH-HLLTMADCS----SVDDGLACQRLGADIIGTTMSGYTTPD 164 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-TCEEEEECC----SHHHHHHHHHTTCSEEECTTTTSSSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC-CCEEEEeCC----CHHHHHHHHhCCCCEEEEcCccCCCCC
Confidence 34456666677743222 221223567778888888764 455665543 2566778889999999642 11
Q ss_pred ---CCcHHHHHHHHhCCCEEEEe--cCCHHHHHHHHHcCCCEEEE
Q 020013 97 ---EYSEELVLEAHSAGVKVVPQ--VGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 97 ---~~~~~~i~~~~~~g~~v~~~--v~s~~~a~~a~~~g~D~ivv 136 (332)
.+..++++++++.+++++.. +.+++++.++.+.|+|+|++
T Consensus 165 ~~~~~~~~~i~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~V 209 (232)
T 3igs_A 165 TPEEPDLPLVKALHDAGCRVIAEGRYNSPALAAEAIRYGAWAVTV 209 (232)
T ss_dssp CCSSCCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 12346777777768888854 67899999999999999999
No 254
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=94.65 E-value=0.46 Score=37.63 Aligned_cols=84 Identities=14% Similarity=0.134 Sum_probs=61.5
Q ss_pred HHHHHhCCCEEEEecCCHHHHHHHH-Hc--CCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHH
Q 020013 103 VLEAHSAGVKVVPQVGSFDEARKAV-NA--GVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDAR 179 (332)
Q Consensus 103 i~~~~~~g~~v~~~v~s~~~a~~a~-~~--g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~ 179 (332)
.+.+++.|..++..+.+.+++.... +. .+|.|++.-.-. ....+.++.++++... ++|||+-.+-.+.+
T Consensus 53 ~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l~------~~~g~~~~~~lr~~~~--~~~ii~ls~~~~~~ 124 (157)
T 3hzh_A 53 TQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITMP------KMDGITCLSNIMEFDK--NARVIMISALGKEQ 124 (157)
T ss_dssp HHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSCS------SSCHHHHHHHHHHHCT--TCCEEEEESCCCHH
T ss_pred HHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccCC------CccHHHHHHHHHhhCC--CCcEEEEeccCcHH
Confidence 3445667888876788888887654 34 689999853211 1234677888877553 68999988888999
Q ss_pred HHHHHHHcCcceeee
Q 020013 180 GYVAALSLGAQGICL 194 (332)
Q Consensus 180 ~v~~al~~GA~gV~~ 194 (332)
.+.+++.+|++++..
T Consensus 125 ~~~~~~~~g~~~~l~ 139 (157)
T 3hzh_A 125 LVKDCLIKGAKTFIV 139 (157)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEe
Confidence 999999999998764
No 255
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=94.54 E-value=0.45 Score=44.05 Aligned_cols=87 Identities=16% Similarity=0.274 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHHHhhc-CCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC--------------Cc----HHHHHHHH
Q 020013 47 APDYLRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--------------YS----EELVLEAH 107 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~-~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~--------------~~----~~~i~~~~ 107 (332)
.+..+.+.++++|+.+ +.|+.+..... .+..+.+.+.|+|+|.++.+. +. .++.+..+
T Consensus 144 ~~~~~~~~i~~lr~~~~~~~vi~g~v~t---~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~ 220 (351)
T 2c6q_A 144 YSEHFVEFVKDVRKRFPQHTIMAGNVVT---GEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAH 220 (351)
T ss_dssp TBHHHHHHHHHHHHHCTTSEEEEEEECS---HHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhcCCCeEEEEeCCC---HHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHh
Confidence 3445667788888876 67887654432 566778899999999775321 11 12333344
Q ss_pred hCCCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 108 SAGVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 108 ~~g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
..+++|+. .+.+..++.+++..|+|+|.+
T Consensus 221 ~~~ipvIa~GGI~~g~di~kAlalGA~~V~v 251 (351)
T 2c6q_A 221 GLKGHIISDGGCSCPGDVAKAFGAGADFVML 251 (351)
T ss_dssp HTTCEEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred hcCCcEEEeCCCCCHHHHHHHHHcCCCceec
Confidence 45899997 688999999999999999988
No 256
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=94.46 E-value=0.43 Score=44.01 Aligned_cols=86 Identities=14% Similarity=0.060 Sum_probs=60.2
Q ss_pred HHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc--cC----------------------CCcHHHHHHH
Q 020013 51 LRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS--WG----------------------EYSEELVLEA 106 (332)
Q Consensus 51 ~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~--~g----------------------~~~~~~i~~~ 106 (332)
+.+.++++++.++.|+.+.+..+....+.++.+.+.|+|+|.+. .| .+..+.+..+
T Consensus 166 ~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v 245 (349)
T 1p0k_A 166 ALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEI 245 (349)
T ss_dssp HHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHH
Confidence 45678888877789998876422123567888889999999883 22 1112234444
Q ss_pred Hh--CCCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 107 HS--AGVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 107 ~~--~g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
++ .+++|+. .+.+.+++.+++..|+|+|.+
T Consensus 246 ~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~i 279 (349)
T 1p0k_A 246 RSEFPASTMIASGGLQDALDVAKAIALGASCTGM 279 (349)
T ss_dssp HHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHhcCCCeEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 44 2688875 477999999999999999988
No 257
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=94.36 E-value=1.1 Score=41.84 Aligned_cols=143 Identities=13% Similarity=0.107 Sum_probs=87.5
Q ss_pred EEEeecCCCCHHHHHHHHhcCCcEEEEccCC-CcHHHHHHHHhCCCEEEEecC--CHHHHHHHH----HcCC-CEEEEec
Q 020013 67 GVGVVLAFPHNENIKAILSEKVAVLQVSWGE-YSEELVLEAHSAGVKVVPQVG--SFDEARKAV----NAGV-DAIIVQG 138 (332)
Q Consensus 67 gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~-~~~~~i~~~~~~g~~v~~~v~--s~~~a~~a~----~~g~-D~ivv~G 138 (332)
|+-++...-+.+.++.+.+.+++++.++.++ ....+++.+-+.|.+|+.+.+ |.+|...+. +.|. +.+++++
T Consensus 114 Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc 193 (385)
T 1vli_A 114 QVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHC 193 (385)
T ss_dssp TCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEE
T ss_pred CCcEEEccCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEec
Confidence 4444444445778888888899999996443 334678888888999987653 787766554 4576 8888875
Q ss_pred CCCCcccCCC--CchhhhHHHHHHHhCCCCCcEEeecCcCC-HHHHHHHHHcCcceeeeccccccCcc--------CCCC
Q 020013 139 REAGGHVIGQ--DGLISLLPMVVDLIGDRDIPIIAAGGIVD-ARGYVAALSLGAQGICLGTRFVASEE--------SYAH 207 (332)
Q Consensus 139 ~eaGGh~~~~--~~~~~ll~~i~~~~~~~~iPviaaGGI~~-~~~v~~al~~GA~gV~~GT~fl~t~E--------s~~~ 207 (332)
.. +.. .+ ...+..++.+++..+ ++||...+=-.. ..-..++.++||+ ++=.-|-..+. |-.+
T Consensus 194 ~s--~YP-tp~~~~nL~aI~~Lk~~f~--~lpVG~SdHt~G~~~~~~AAvAlGA~--iIEkHftldra~~G~D~~~SL~P 266 (385)
T 1vli_A 194 VA--KYP-APPEYSNLSVIPMLAAAFP--EAVIGFSDHSEHPTEAPCAAVRLGAK--LIEKHFTIDKNLPGADHSFALNP 266 (385)
T ss_dssp CS--SSS-CCGGGCCTTHHHHHHHHST--TSEEEEEECCSSSSHHHHHHHHTTCS--EEEEEBCSCTTSSCSSCTTSBCH
T ss_pred cC--CCC-CChhhcCHHHHHHHHHHcC--CCCEEeCCCCCCchHHHHHHHHcCCC--EEEeCCCccccCCCCchhhhCCH
Confidence 42 111 11 123566888877652 488866543322 3445677899999 33333332222 2235
Q ss_pred HHHHHHHhc
Q 020013 208 PEYKRKLVE 216 (332)
Q Consensus 208 ~~~k~~~~~ 216 (332)
+++++.+.+
T Consensus 267 ~ef~~lv~~ 275 (385)
T 1vli_A 267 DELKEMVDG 275 (385)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666554
No 258
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=94.33 E-value=0.51 Score=41.72 Aligned_cols=162 Identities=17% Similarity=0.164 Sum_probs=87.6
Q ss_pred CCcHHHHHHHHhC-C-Cc-eeecCCCCC--CHHHHHHHHHHHHhhcCCcEEEEeecCCCC---HHHHHHHHhcCCcEEEE
Q 020013 22 ISGPELVAAVANA-G-GL-GLLRAPDWE--APDYLRDLIRKTRSLTERPFGVGVVLAFPH---NENIKAILSEKVAVLQV 93 (332)
Q Consensus 22 ~s~~~la~avs~a-G-gl-G~i~~~~~~--~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~---~~~~~~~~~~~~~~I~~ 93 (332)
+++.+-+.++.+. + .+ .++..+ +. .... .+.++.+++. +.++-..+-..+-. ...++.+.+.++|++.+
T Consensus 13 ~~~~~~al~l~~~l~~~v~~~~KvG-~~l~~~~G-~~~v~~Lk~~-g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTV 89 (259)
T 3tfx_A 13 LDNEEQLNKILSKLGDPHDVFVKVG-MELFYNAG-IDVIKKLTQQ-GYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTV 89 (259)
T ss_dssp CSCHHHHHHHHHTTCCGGGCEEEEC-HHHHHHHC-HHHHHHHHHT-TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEE
T ss_pred CCCHHHHHHHHHHhCcccceEEEeC-HHHHHhcC-HHHHHHHHHC-CCcEEEEecccccchHHHHHHHHHHhcCCCEEEE
Confidence 5666666666654 2 34 455432 10 0000 1234555543 44554554443321 23456677789999999
Q ss_pred ccCCCcHHHHH----HHHh---CC---CEEEEe--cCCH--------------------HHHHHHHHcCCCEEEEecCCC
Q 020013 94 SWGEYSEELVL----EAHS---AG---VKVVPQ--VGSF--------------------DEARKAVNAGVDAIIVQGREA 141 (332)
Q Consensus 94 ~~g~~~~~~i~----~~~~---~g---~~v~~~--v~s~--------------------~~a~~a~~~g~D~ivv~G~ea 141 (332)
|.-. ..+.++ .+++ .| .+++.. .+|. +-++.+.++|+|++|+..
T Consensus 90 h~~~-G~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s~--- 165 (259)
T 3tfx_A 90 HALG-GSQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICSP--- 165 (259)
T ss_dssp EGGG-CHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECCG---
T ss_pred cCCC-CHHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEECH---
Confidence 7311 223333 3332 12 334421 2221 123445678999998721
Q ss_pred CcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHH----------HHHHHHHcCcceeeeccccccCcc
Q 020013 142 GGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDAR----------GYVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 142 GGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~----------~v~~al~~GA~gV~~GT~fl~t~E 203 (332)
.-+..+++..+ +-.++...||+-.. +..+++.+|||-+++|+.+..++.
T Consensus 166 -----------~e~~~ir~~~~--~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~d 224 (259)
T 3tfx_A 166 -----------LEVKKLHENIG--DDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASD 224 (259)
T ss_dssp -----------GGHHHHHHHHC--SSSEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSSS
T ss_pred -----------HHHHHHHhhcC--CccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCC
Confidence 11344555553 34577889995321 277889999999999999887653
No 259
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=94.32 E-value=0.2 Score=44.00 Aligned_cols=117 Identities=17% Similarity=0.236 Sum_probs=71.0
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHH----HHHHHHhCCCEEEEecCCHHHHHH--------------HHHcCC--
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEE----LVLEAHSAGVKVVPQVGSFDEARK--------------AVNAGV-- 131 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~----~i~~~~~~g~~v~~~v~s~~~a~~--------------a~~~g~-- 131 (332)
....+.+.|++++.++ |+. ..+ -++.+.+.|+.++..++...+-+. ++ .+.
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l-~~~~~ 156 (248)
T 1o5x_A 79 SAEIAKDLNIEYVIIGHFERRKYFHE-TDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFV-DLIDN 156 (248)
T ss_dssp CHHHHHHTTCCEEEECCHHHHHHSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHTTG-GGCCC
T ss_pred CHHHHHHcCCCEEEeCChhhhcccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCChHHHHHHHHHHHH-hhhhh
Confidence 4567888999999985 454 333 234456789999888874322221 11 122
Q ss_pred --CEEEE-ecCCCCcccCCCCch-------hhhHHHHHHH-hC---CCCCcEEeecCcCCHHHHHHHHH-cCcceeeecc
Q 020013 132 --DAIIV-QGREAGGHVIGQDGL-------ISLLPMVVDL-IG---DRDIPIIAAGGIVDARGYVAALS-LGAQGICLGT 196 (332)
Q Consensus 132 --D~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~~-~~---~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~GT 196 (332)
..|++ +..-+=|. |...+ ...+++.... +. ..+++|+..|+| +++|+.+.++ .+.||+.+|+
T Consensus 157 ~~~~vIAYEPvWAIGT--G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGg 233 (248)
T 1o5x_A 157 FDNVILVYEPLWAIGT--GKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSV-NTENCSSLIQQEDIDGFLVGN 233 (248)
T ss_dssp TTSEEEEECCGGGSSS--SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCC-CTTTHHHHHTSTTCCEEEECG
T ss_pred hcCEEEEECCHHHhCC--CCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCC-CHHHHHHHHcCCCCCeeEeeH
Confidence 44554 44344333 12122 2233332211 10 014899999999 7889999998 8999999999
Q ss_pred cccc
Q 020013 197 RFVA 200 (332)
Q Consensus 197 ~fl~ 200 (332)
+-+.
T Consensus 234 AsL~ 237 (248)
T 1o5x_A 234 ASLK 237 (248)
T ss_dssp GGGS
T ss_pred HHHH
Confidence 9876
No 260
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=94.30 E-value=0.13 Score=46.68 Aligned_cols=79 Identities=27% Similarity=0.436 Sum_probs=50.5
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~f 198 (332)
+....+.|+|+|++-|..+-++......-..++..+++...+ ++|||+.=|=.+-++.. .+-.+|||++++-+.+
T Consensus 42 v~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 120 (304)
T 3l21_A 42 ANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGD-RARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPY 120 (304)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-TSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 445668899999997765444332222235566666776643 68988754433444443 3345899999999988
Q ss_pred ccCc
Q 020013 199 VASE 202 (332)
Q Consensus 199 l~t~ 202 (332)
....
T Consensus 121 y~~~ 124 (304)
T 3l21_A 121 YSKP 124 (304)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 7653
No 261
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=94.29 E-value=0.78 Score=44.33 Aligned_cols=110 Identities=18% Similarity=0.211 Sum_probs=71.4
Q ss_pred cHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhc-CCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccC------
Q 020013 24 GPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG------ 96 (332)
Q Consensus 24 ~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~-~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g------ 96 (332)
..+.+..+.++|.-.+........+....+.++++++.+ +.|+.+.-.. ..+..+.+.+.|+|+|.++.+
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~---t~e~a~~l~~~G~d~I~v~~~~G~~~~ 314 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVA---TPEGTEALIKAGADAVKVGVGPGSICT 314 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEEC---SHHHHHHHHHTTCSEEEECSSCSTTCH
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcC---CHHHHHHHHHcCCCEEEEcCCCCcccc
Confidence 356777777777544332111123445567788888776 6787654222 245667888999999988421
Q ss_pred --------CCcHHHHHH----HHhCCCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 97 --------EYSEELVLE----AHSAGVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 97 --------~~~~~~i~~----~~~~g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
.+....+.. +++.+++|+. .+.+..++.+++..|+|+|.+
T Consensus 315 ~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~i 368 (494)
T 1vrd_A 315 TRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMV 368 (494)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred ccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 222222222 3334789987 688999999999999999987
No 262
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=94.28 E-value=0.26 Score=43.31 Aligned_cols=117 Identities=19% Similarity=0.314 Sum_probs=71.0
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHH----HHHHHhCCCEEEEecCC-HHHH-------------HHHHHcCC--
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEEL----VLEAHSAGVKVVPQVGS-FDEA-------------RKAVNAGV-- 131 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~----i~~~~~~g~~v~~~v~s-~~~a-------------~~a~~~g~-- 131 (332)
....+.+.|++++.++ |+. ..++ ++.+.+.|+.++..++. .++- +.++ .+.
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l-~~~~~ 156 (250)
T 2j27_A 79 SLPILKDFGVNWIVLGHSERRAYYGE-TNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIA-KKLKK 156 (250)
T ss_dssp BHHHHHHTTCCEEEESCHHHHHHSCC-CHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHH-HTCCG
T ss_pred CHHHHHHcCCCEEEECchhhhcccCC-CHHHHHHHHHHHHHCCCEEEEEeCCCHHHhhcccHHHHHHHHHHHHH-hcCCH
Confidence 4567888999999985 454 3332 33455679998888873 3322 1122 222
Q ss_pred ----CEEEE-ecCCCCcccCCCCch-------hhhHHHHHHH-hC---CCCCcEEeecCcCCHHHHHHHH-HcCcceeee
Q 020013 132 ----DAIIV-QGREAGGHVIGQDGL-------ISLLPMVVDL-IG---DRDIPIIAAGGIVDARGYVAAL-SLGAQGICL 194 (332)
Q Consensus 132 ----D~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~~-~~---~~~iPviaaGGI~~~~~v~~al-~~GA~gV~~ 194 (332)
..+++ +..-+=|. |...+ ...+++.... +. ..+++|+..|+| +++|+.+++ ..+.||+.+
T Consensus 157 ~~~~~~vIAYEPvWAIGT--G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LV 233 (250)
T 2j27_A 157 ADWAKVVIAYEAVWAIGT--GKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSV-NGKNARTLYQQRDVNGFLV 233 (250)
T ss_dssp GGGGGEEEEEECGGGTTS--SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSC-CTTTHHHHHTSTTCCEEEE
T ss_pred HHhCCEEEEECCHHHhCC--CCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCC-CHHHHHHHHcCCCCCeeee
Confidence 34444 54444443 22222 2233332111 10 014899999999 788999999 579999999
Q ss_pred cccccc
Q 020013 195 GTRFVA 200 (332)
Q Consensus 195 GT~fl~ 200 (332)
|++-+.
T Consensus 234 GgAsL~ 239 (250)
T 2j27_A 234 GGASLK 239 (250)
T ss_dssp SGGGGS
T ss_pred ehHHHH
Confidence 999876
No 263
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=94.27 E-value=2.6 Score=37.93 Aligned_cols=168 Identities=12% Similarity=0.071 Sum_probs=102.4
Q ss_pred CCCcHHHHHHHHhCCCceee-----------cCC--CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCC----HHHHHHH
Q 020013 21 DISGPELVAAVANAGGLGLL-----------RAP--DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH----NENIKAI 83 (332)
Q Consensus 21 g~s~~~la~avs~aGglG~i-----------~~~--~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~----~~~~~~~ 83 (332)
+.-++-.+..+.++|.=.+. +.+ ...+.+++...++.+...++.|+-+.+-.-... .+.++.+
T Consensus 28 ~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l 107 (298)
T 3eoo_A 28 GAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTIRSF 107 (298)
T ss_dssp ECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHH
Confidence 46677777777777621111 111 124567777777777666777876654322111 2345667
Q ss_pred HhcCCcEEEEccCC--------------CcHHHHHHHHh-------CCCEEEEecCCH---------HHHHHHHHcCCCE
Q 020013 84 LSEKVAVLQVSWGE--------------YSEELVLEAHS-------AGVKVVPQVGSF---------DEARKAVNAGVDA 133 (332)
Q Consensus 84 ~~~~~~~I~~~~g~--------------~~~~~i~~~~~-------~g~~v~~~v~s~---------~~a~~a~~~g~D~ 133 (332)
.+.|+..|.+--+. +..+.+++++. .+..|+.-..+. +.++...++|+|.
T Consensus 108 ~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~ 187 (298)
T 3eoo_A 108 IKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADM 187 (298)
T ss_dssp HHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCE
Confidence 78899999863111 23456666642 245666554432 3344567899999
Q ss_pred EEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe---ecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 134 IIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA---AGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 134 ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia---aGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
|.+.+. .+...+.++.+.+ ++|+++ .+|-...-+..+.-++|..-|..|...+.+
T Consensus 188 if~~~~----------~~~ee~~~~~~~~---~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ra 245 (298)
T 3eoo_A 188 IFPEAM----------KTLDDYRRFKEAV---KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYRA 245 (298)
T ss_dssp EEECCC----------CSHHHHHHHHHHH---CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHHH
T ss_pred EEeCCC----------CCHHHHHHHHHHc---CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHH
Confidence 999653 2356677888888 688765 355422235667778999999998776654
No 264
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=94.25 E-value=1.1 Score=40.21 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=81.0
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccC-CCcHHHHHHHHhCCCEEEEecC---CHHHHHH---
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG-EYSEELVLEAHSAGVKVVPQVG---SFDEARK--- 125 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g-~~~~~~i~~~~~~g~~v~~~v~---s~~~a~~--- 125 (332)
++++++++.++.|+..-++- .+.++.+.+. +|++++... ....++++.+-+.+.+|+.+-+ +++|.+.
T Consensus 81 ~~L~~~~~e~Glp~~Tev~d----~~~v~~l~~~-vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G~~~t~~ei~~ave 155 (285)
T 3sz8_A 81 KIFAEVKARFGVPVITDVHE----AEQAAPVAEI-ADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQLKHVVS 155 (285)
T ss_dssp HHHHHHHHHHCCCEEEECCS----GGGHHHHHTT-CSEEEECGGGTTCHHHHHHHHHTSSCEEEECCTTSCGGGTHHHHH
T ss_pred HHHHHHHHhcCCeEEEEeCC----HHHHHHHHHh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHH
Confidence 34555555566777655443 5667777777 999999743 2344677777778999887643 5544433
Q ss_pred -HHHcCCC-EEEEe-cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-----------cCcCCH------HHHHHHH
Q 020013 126 -AVNAGVD-AIIVQ-GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-----------GGIVDA------RGYVAAL 185 (332)
Q Consensus 126 -a~~~g~D-~ivv~-G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-----------GGI~~~------~~v~~al 185 (332)
..+.|.+ .++++ |... +.. .....+..++.+++... ++||+.. ||.+.+ .-..++.
T Consensus 156 ~i~~~Gn~~i~L~erg~~y-~~~-~~~vdl~~i~~lk~~~~--~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAv 231 (285)
T 3sz8_A 156 KCGEVGNDRVMLCERGSSF-GYD-NLVVDMLGFRQMAETTG--GCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGI 231 (285)
T ss_dssp HHHHTTCCCEEEEECCEEC-SSS-CEECCTTHHHHHHHHTT--SCCEEEETTTTCC---------------HHHHHHHHH
T ss_pred HHHHcCCCcEEEEeCCCCC-CCC-cCccCHHHHHHHHHhCC--CCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHH
Confidence 3456765 44443 3322 111 11134777888887652 3899883 222122 2345788
Q ss_pred HcCcceeeecccc
Q 020013 186 SLGAQGICLGTRF 198 (332)
Q Consensus 186 ~~GA~gV~~GT~f 198 (332)
++||||+++=+.|
T Consensus 232 A~GA~gl~IE~H~ 244 (285)
T 3sz8_A 232 AVGIAGLFLEAHP 244 (285)
T ss_dssp HHCCSEEEEEEES
T ss_pred HhCCCEEEEEecc
Confidence 8999999985443
No 265
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=94.24 E-value=0.4 Score=44.66 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc-----------------------CCCcHHHHH
Q 020013 48 PDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW-----------------------GEYSEELVL 104 (332)
Q Consensus 48 ~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~-----------------------g~~~~~~i~ 104 (332)
.+.+.+.++++++.++.|+.+..+.+....+..+.+.+.|+|+|.++. |.+....+.
T Consensus 191 ~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~ 270 (365)
T 3sr7_A 191 FRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLL 270 (365)
T ss_dssp CHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHH
Confidence 344567788888888999999854322235677888999999998731 111112233
Q ss_pred HHHhC--CCEEEEe--cCCHHHHHHHHHcCCCEEEE
Q 020013 105 EAHSA--GVKVVPQ--VGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 105 ~~~~~--g~~v~~~--v~s~~~a~~a~~~g~D~ivv 136 (332)
.++.. .++|+.. +.+..++.+++..|||+|.+
T Consensus 271 ~v~~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~i 306 (365)
T 3sr7_A 271 NAQPLMDKVEILASGGIRHPLDIIKALVLGAKAVGL 306 (365)
T ss_dssp HHGGGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 33332 5778754 77999999999999999988
No 266
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=94.22 E-value=0.18 Score=44.91 Aligned_cols=128 Identities=20% Similarity=0.176 Sum_probs=76.1
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHH----HHHHHHhCCCEEEEecCCHHHHHH--------------HHHcC---
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEE----LVLEAHSAGVKVVPQVGSFDEARK--------------AVNAG--- 130 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~----~i~~~~~~g~~v~~~v~s~~~a~~--------------a~~~g--- 130 (332)
..+.+.+.|++.+.++ |+. ..+ -++.+.+.|+.++..++...+.+. .+ .+
T Consensus 98 S~~mLkd~G~~~ViiGHSERR~~f~E-tde~V~~Kv~~Al~~GL~pI~CvGEtleeReag~t~~vv~~Ql~~~l-~~~~~ 175 (275)
T 1mo0_A 98 SPAMIKDLGLEWVILGHSERRHVFGE-SDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIV-DKGVS 175 (275)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHH-TTTCC
T ss_pred CHHHHHHcCCCEEEeCchhhhcccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHHHH-hhhhh
Confidence 4567888999999985 454 333 234456789999888873322211 12 22
Q ss_pred -CCEEEE-ecCCCCcccCCCCch-------hhhHHHHHH-HhC---CCCCcEEeecCcCCHHHHHHHHH-cCcceeeecc
Q 020013 131 -VDAIIV-QGREAGGHVIGQDGL-------ISLLPMVVD-LIG---DRDIPIIAAGGIVDARGYVAALS-LGAQGICLGT 196 (332)
Q Consensus 131 -~D~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~-~~~---~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~GT 196 (332)
...||+ +..-+=|. |...+ ...|++... .+. ..+++|+-.|+| +++|+.+.+. .+.||+.+|+
T Consensus 176 ~~~vvIAYEPvWAIGT--GktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV-~~~N~~el~~~~diDG~LVGg 252 (275)
T 1mo0_A 176 WENIVIAYEPVWAIGT--GKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSV-TADNAAELGKKPDIDGFLVGG 252 (275)
T ss_dssp STTEEEEECCGGGTTT--SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSC-CTTTHHHHTTSTTCCEEEESG
T ss_pred hcCEEEEECCHHHhCC--CCCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCC-CHhhHHHHhcCCCCCeeEech
Confidence 134444 44444443 22222 222332111 110 014899999999 8899988876 6899999999
Q ss_pred ccccCccCCCCHHHHHHHhcC
Q 020013 197 RFVASEESYAHPEYKRKLVEM 217 (332)
Q Consensus 197 ~fl~t~Es~~~~~~k~~~~~~ 217 (332)
+-+.. +.|.+.+..+
T Consensus 253 ASLka------~~F~~Ii~~~ 267 (275)
T 1mo0_A 253 ASLKP------DFVKIINARS 267 (275)
T ss_dssp GGGST------HHHHHHHHHS
T ss_pred HHhCh------HHHHHHHHhh
Confidence 97754 4566665443
No 267
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=94.15 E-value=0.067 Score=46.06 Aligned_cols=103 Identities=22% Similarity=0.130 Sum_probs=61.1
Q ss_pred HHHHHHHhcCCcEEEEccCCCcHHHHHHHHhC-CCE-EEEec-CCH-----H----HHHHHHHcCCCEEEEecCCCCccc
Q 020013 78 ENIKAILSEKVAVLQVSWGEYSEELVLEAHSA-GVK-VVPQV-GSF-----D----EARKAVNAGVDAIIVQGREAGGHV 145 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~-g~~-v~~~v-~s~-----~----~a~~a~~~g~D~ivv~G~eaGGh~ 145 (332)
..++.+.+.|+|+|.+|.-. ..+.++.+.+. ..+ +...+ ++. + .++. .+.|+| ++..+
T Consensus 76 ~~v~~~~~~GaD~vTvh~~~-G~~~l~~~~~~~~~~~~~V~~lts~~~~l~~~v~~~a~~-~e~G~d-vV~~~------- 145 (213)
T 1vqt_A 76 RSIKSWDHPAIIGFTVHSCA-GYESVERALSATDKHVFVVVKLTSMEGSLEDYMDRIEKL-NKLGCD-FVLPG------- 145 (213)
T ss_dssp HHHHHHCCTTEEEEEEEGGG-CHHHHHHHHHHCSSEEEEECCCTTSCCCHHHHHHHHHHH-HHHTCE-EECCH-------
T ss_pred HHHHHHHHCCCCEEEEeccC-CHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHHHH-hcCCCE-EEEcH-------
Confidence 34566778899999998321 23445444432 222 22222 221 2 3455 778999 54411
Q ss_pred CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHH----------HHHHHHcCcceeeeccccccCcc
Q 020013 146 IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG----------YVAALSLGAQGICLGTRFVASEE 203 (332)
Q Consensus 146 ~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~----------v~~al~~GA~gV~~GT~fl~t~E 203 (332)
.-+..+++.. +.| +..+||+ +++ ..+ +..|||.+++|+.+..++.
T Consensus 146 -------~~~~~ir~~~---~~~-~v~pGI~-~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a~d 200 (213)
T 1vqt_A 146 -------PWAKALREKI---KGK-ILVPGIR-MEVKADDQKDVVTLEE-MKGIANFAVLGREIYLSEN 200 (213)
T ss_dssp -------HHHHHHTTTC---CSC-EEECCBC----------CCBCHHH-HTTTCSEEEESHHHHTSSC
T ss_pred -------HHHHHHHHHC---CCC-EEECCCC-CCCCccchhhcCCHHH-HHCCCCEEEEChhhcCCCC
Confidence 2334455544 346 8889994 454 578 9999999999999987654
No 268
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=94.14 E-value=0.13 Score=46.63 Aligned_cols=79 Identities=18% Similarity=0.254 Sum_probs=50.0
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~ 197 (332)
.++...+.|+|+|++-|..+-++......-..++..+++...+ ++|||+.=|=.+-++.. .+-++|||++++-+.
T Consensus 33 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 33 LIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK-RVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC-CCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 3445678899999997764444332222234566666666643 68988754432444433 344589999999998
Q ss_pred cccC
Q 020013 198 FVAS 201 (332)
Q Consensus 198 fl~t 201 (332)
+...
T Consensus 112 ~y~~ 115 (297)
T 3flu_A 112 YYNK 115 (297)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8764
No 269
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=94.14 E-value=0.22 Score=43.78 Aligned_cols=118 Identities=19% Similarity=0.222 Sum_probs=70.7
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHH----HHHHHHhCCCEEEEecCCHHHHHH--------------HHHcCC--
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEE----LVLEAHSAGVKVVPQVGSFDEARK--------------AVNAGV-- 131 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~----~i~~~~~~g~~v~~~v~s~~~a~~--------------a~~~g~-- 131 (332)
....+.+.|++++.++ |+. ..+ -++.+.+.|+.++..++...+.+. .+ .+.
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l-~~~~~ 156 (248)
T 1r2r_A 79 SPGMIKDCGATWVVLGHSERRHVFGE-SDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIA-DNVKD 156 (248)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHH-HTCSC
T ss_pred CHHHHHHcCCCEEEECChhhhcccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHHHH-hhhhh
Confidence 4567888999999985 454 333 234456789998888874322222 12 122
Q ss_pred --CEEEE-ecCCCCcccCCCCch-------hhhHHHHHH-HhC---CCCCcEEeecCcCCHHHHHHHHH-cCcceeeecc
Q 020013 132 --DAIIV-QGREAGGHVIGQDGL-------ISLLPMVVD-LIG---DRDIPIIAAGGIVDARGYVAALS-LGAQGICLGT 196 (332)
Q Consensus 132 --D~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~-~~~---~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~GT 196 (332)
..+++ +..-+=|. |...+ ...+++... .+. ..+++|+..|+| +++|+.+.+. .+.||+.+|+
T Consensus 157 ~~~~vIAYEPvWAIGT--G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGg 233 (248)
T 1r2r_A 157 WSKVVLAYEPVWAIGT--GKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSV-TGATCKELASQPDVDGFLVGG 233 (248)
T ss_dssp GGGEEEEECCGGGSSS--SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCC-CTTTHHHHHTSTTCCEEEESG
T ss_pred hhceEEEEecHHhhCC--CCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCc-CHhHHHHHHcCCCCCeeEech
Confidence 34444 44444443 22222 222332211 110 014899999999 8899988886 6899999999
Q ss_pred ccccC
Q 020013 197 RFVAS 201 (332)
Q Consensus 197 ~fl~t 201 (332)
+-+..
T Consensus 234 AsL~a 238 (248)
T 1r2r_A 234 ASLKP 238 (248)
T ss_dssp GGGST
T ss_pred HHhCh
Confidence 97754
No 270
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.05 E-value=0.28 Score=44.43 Aligned_cols=90 Identities=17% Similarity=0.053 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHHhhcCCcEEEEeecCCCCHH---HHHHHHhcC-CcEEEEccCC-------------------------
Q 020013 47 APDYLRDLIRKTRSLTERPFGVGVVLAFPHNE---NIKAILSEK-VAVLQVSWGE------------------------- 97 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~---~~~~~~~~~-~~~I~~~~g~------------------------- 97 (332)
+++.+.+.++.+|+.++.|+.+.+-.....++ ..+.+.+.| +|+|.++...
T Consensus 144 ~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~s 223 (314)
T 2e6f_A 144 DFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLG 223 (314)
T ss_dssp SHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccC
Confidence 67788889999998878899887654432122 256667889 9999765210
Q ss_pred -C---c--HHHHHHHHhC--CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 98 -Y---S--EELVLEAHSA--GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 98 -~---~--~~~i~~~~~~--g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
. | .++++.+++. .++|+. .+.+.+++.+++..|||.|.+
T Consensus 224 g~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~i 272 (314)
T 2e6f_A 224 GKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQV 272 (314)
T ss_dssp SGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEE
T ss_pred cccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 0 0 2456666553 688875 477999999999999999987
No 271
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=94.04 E-value=0.76 Score=34.54 Aligned_cols=84 Identities=18% Similarity=0.133 Sum_probs=59.1
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..++..|..+. .+.+.+++....+ ..+|.|++.-.- .....+.++.++++.....++|||.-.+-.+.+...
T Consensus 20 ~~l~~~g~~v~-~~~~~~~al~~l~~~~~dlvllD~~~------p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~ 92 (122)
T 3gl9_A 20 FNLKKEGYEVI-EAENGQIALEKLSEFTPDLIVLXIMM------PVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDES 92 (122)
T ss_dssp HHHHHTTCEEE-EESSHHHHHHHHTTBCCSEEEECSCC------SSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHH
T ss_pred HHHHHCCcEEE-EeCCHHHHHHHHHhcCCCEEEEeccC------CCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHH
Confidence 34566788776 6788888876654 579999984321 112346777777654211268999888888899999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++.+||+++..
T Consensus 93 ~~~~~Ga~~~l~ 104 (122)
T 3gl9_A 93 LALSLGARKVMR 104 (122)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHhcChhhhcc
Confidence 999999998753
No 272
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.04 E-value=0.82 Score=41.03 Aligned_cols=133 Identities=12% Similarity=0.104 Sum_probs=82.4
Q ss_pred HHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc-----------CCCcH-------HHHHHHHhCCCEE
Q 020013 52 RDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW-----------GEYSE-------ELVLEAHSAGVKV 113 (332)
Q Consensus 52 ~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~-----------g~~~~-------~~i~~~~~~g~~v 113 (332)
.+.++.+++..+.++.+- . +..+.++.+.+.+++.|.+.. +.... +.++.+++.|+.|
T Consensus 61 ~e~~~~i~~~~~~~v~~l--~--~n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V 136 (295)
T 1ydn_A 61 REVMAGIRRADGVRYSVL--V--PNMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAI 136 (295)
T ss_dssp HHHHHHSCCCSSSEEEEE--C--SSHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCCEEEEE--e--CCHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 344555544333444432 2 346778889999999987753 11222 2356667889987
Q ss_pred EEe-----------cCCHHHHHH----HHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeec----C
Q 020013 114 VPQ-----------VGSFDEARK----AVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAG----G 174 (332)
Q Consensus 114 ~~~-----------v~s~~~a~~----a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaG----G 174 (332)
-.. ..+++++.. +.+.|+|.|.+.-. -|.. .+.....++..+++.++ ++|+..-+ |
T Consensus 137 ~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt--~G~~-~P~~~~~lv~~l~~~~~--~~~l~~H~Hn~~G 211 (295)
T 1ydn_A 137 RGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDT--IGRG-TPDTVAAMLDAVLAIAP--AHSLAGHYHDTGG 211 (295)
T ss_dssp EEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEET--TSCC-CHHHHHHHHHHHHTTSC--GGGEEEEEBCTTS
T ss_pred EEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCC--CCCc-CHHHHHHHHHHHHHhCC--CCeEEEEECCCcc
Confidence 521 236665543 45789999988532 2221 23345777777777662 37777654 6
Q ss_pred cCCHHHHHHHHHcCcceeee
Q 020013 175 IVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 175 I~~~~~v~~al~~GA~gV~~ 194 (332)
++ -.+..+++.+|++-|..
T Consensus 212 la-~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 212 RA-LDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp CH-HHHHHHHHHHTCCEEEE
T ss_pred hH-HHHHHHHHHhCCCEEEe
Confidence 64 46788889999997775
No 273
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=94.03 E-value=0.16 Score=45.78 Aligned_cols=79 Identities=22% Similarity=0.281 Sum_probs=49.2
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHH----HHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAA----LSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~a----l~~GA~gV~~GT~ 197 (332)
.++...+.|+|+|++-|..+-++......-..++..+++...+ ++|||+.=|=.+-+++.+. -++|||++++-+.
T Consensus 27 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 27 LIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG-RIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3445667899999997764444332222235566666666643 6898854443344444333 2479999999998
Q ss_pred cccC
Q 020013 198 FVAS 201 (332)
Q Consensus 198 fl~t 201 (332)
+...
T Consensus 106 ~y~~ 109 (292)
T 2ojp_A 106 YYNR 109 (292)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8754
No 274
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=94.01 E-value=1 Score=34.61 Aligned_cols=83 Identities=16% Similarity=0.168 Sum_probs=59.5
Q ss_pred HHHHHhCCCEEEEecCCHHHHHHHHH---cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHH
Q 020013 103 VLEAHSAGVKVVPQVGSFDEARKAVN---AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDAR 179 (332)
Q Consensus 103 i~~~~~~g~~v~~~v~s~~~a~~a~~---~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~ 179 (332)
.+.+...|..+. .+.+.+++..... ..+|.|++.-.-. ....+.++..+++..+ ++|||+-.+-.+.+
T Consensus 20 ~~~l~~~g~~v~-~~~~~~~a~~~~~~~~~~~dlvi~d~~l~------~~~g~~~~~~l~~~~~--~~~ii~ls~~~~~~ 90 (143)
T 3jte_A 20 KFLLEIDGNEVL-TASSSTEGLRIFTENCNSIDVVITDMKMP------KLSGMDILREIKKITP--HMAVIILTGHGDLD 90 (143)
T ss_dssp HHHHHHTTCEEE-EESSHHHHHHHHHHTTTTCCEEEEESCCS------SSCHHHHHHHHHHHCT--TCEEEEEECTTCHH
T ss_pred HHHHHhCCceEE-EeCCHHHHHHHHHhCCCCCCEEEEeCCCC------CCcHHHHHHHHHHhCC--CCeEEEEECCCCHH
Confidence 344556677655 6778888876654 4799999853321 1234677888877543 68999888888889
Q ss_pred HHHHHHHcCcceeee
Q 020013 180 GYVAALSLGAQGICL 194 (332)
Q Consensus 180 ~v~~al~~GA~gV~~ 194 (332)
.+..++.+||+++..
T Consensus 91 ~~~~~~~~g~~~~l~ 105 (143)
T 3jte_A 91 NAILAMKEGAFEYLR 105 (143)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCcceeEe
Confidence 999999999998764
No 275
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=93.98 E-value=0.17 Score=45.86 Aligned_cols=78 Identities=19% Similarity=0.354 Sum_probs=48.9
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-cCcCCHHHH---HHHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-GGIVDARGY---VAALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-GGI~~~~~v---~~al~~GA~gV~~GT~f 198 (332)
++...+.|+|+|++-|..+-++......-..++..+++...+ ++|||+. |+.++.+.+ ..+-++|||++++-+.+
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 117 (301)
T 1xky_A 39 VNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK-RVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPY 117 (301)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 445668899999997764444331222234566666666643 6898854 444433333 23445899999999998
Q ss_pred ccC
Q 020013 199 VAS 201 (332)
Q Consensus 199 l~t 201 (332)
...
T Consensus 118 y~~ 120 (301)
T 1xky_A 118 YNK 120 (301)
T ss_dssp SSC
T ss_pred CCC
Confidence 754
No 276
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=93.96 E-value=1.2 Score=38.38 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=84.2
Q ss_pred HHHHHHHHhhcCCcEEEEeecCCCCHHHHH---HHHhcCCcEEE-EccCCCcHHHHHHHHhCCCEEEEe-cCCHHHHHHH
Q 020013 52 RDLIRKTRSLTERPFGVGVVLAFPHNENIK---AILSEKVAVLQ-VSWGEYSEELVLEAHSAGVKVVPQ-VGSFDEARKA 126 (332)
Q Consensus 52 ~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~---~~~~~~~~~I~-~~~g~~~~~~i~~~~~~g~~v~~~-v~s~~~a~~a 126 (332)
.+.++++.+..+.|+.+-+... ..++.++ .+.+....++. +..-..--+.++.+.+.|+++-.+ +-|..++..+
T Consensus 43 ~~~~~ei~~~v~G~Vs~EV~a~-d~e~mi~eA~~L~~~~~nv~IKIP~T~eGl~A~~~L~~~GI~vn~TlifS~~QA~~A 121 (223)
T 3s1x_A 43 GDIIREILKIVDGPVSVEVVST-KYEGMVEEARKIHGLGDNAVVKIPMTEDGLRAIKTLSSEHINTNCTLVFNPIQALLA 121 (223)
T ss_dssp HHHHHHHHHHCSSCEEEECCCC-SHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHTTCCEEEEEECSHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEccC-CHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHH
Confidence 3445556666677777766542 2233333 33444444432 332111125577888889998654 6799999999
Q ss_pred HHcCCCEEEE-ecC--CCCcccCCCCchhhhHHHHHHHhCCCC-CcEEeecCcCCHHHHHHHHHcCcceeeec
Q 020013 127 VNAGVDAIIV-QGR--EAGGHVIGQDGLISLLPMVVDLIGDRD-IPIIAAGGIVDARGYVAALSLGAQGICLG 195 (332)
Q Consensus 127 ~~~g~D~ivv-~G~--eaGGh~~~~~~~~~ll~~i~~~~~~~~-iPviaaGGI~~~~~v~~al~~GA~gV~~G 195 (332)
.++|+++|-. -|+ +.| + ..+.++.++.+.++..+ -..|.+..+.+..++.++..+|||.+-+.
T Consensus 122 a~AGa~yISPfvgRi~d~g-~-----dG~~~v~~i~~~~~~~~~~T~IlaAS~Rn~~~v~~aa~~G~d~~Tip 188 (223)
T 3s1x_A 122 AKAGVTYVSPFVGRLDDIG-E-----DGMQIIDMIRTIFNNYIIKTQILVASIRNPIHVLRSAVIGADVVTVP 188 (223)
T ss_dssp HHTTCSEEEEBSHHHHHTT-S-----CTHHHHHHHHHHHHHTTCCSEEEEBSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHcCCeEEEeecchHhhcC-C-----CHHHHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHHHcCCCEEEeC
Confidence 9999999865 332 111 1 22556666665543211 23455566889999999999999988763
No 277
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=93.92 E-value=0.14 Score=47.53 Aligned_cols=76 Identities=18% Similarity=0.292 Sum_probs=51.2
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeeccccccC
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVAS 201 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~GT~fl~t 201 (332)
++...+.|+|++-+......+.. +......+.+.+++.. +.||+ .||+.+++.+.++|+-| ||.|.||..|++.
T Consensus 247 ~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~a~~ik~~~---~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~lad 321 (358)
T 4a3u_A 247 AKMLSDLDIAFLGMREGAVDGTF-GKTDQPKLSPEIRKVF---KPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIGN 321 (358)
T ss_dssp HHHHHHHTCSEEEEECCBTTCSS-SBCSSCCCHHHHHHHC---CSCEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHHC
T ss_pred HHhhhccCccccccccccccCcc-cccccHHHHHHHHHhc---CCcEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHhC
Confidence 34456779999987543211111 1111234556777665 56666 46667999999999998 8999999999987
Q ss_pred cc
Q 020013 202 EE 203 (332)
Q Consensus 202 ~E 203 (332)
++
T Consensus 322 Pd 323 (358)
T 4a3u_A 322 PD 323 (358)
T ss_dssp TT
T ss_pred hh
Confidence 65
No 278
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.91 E-value=0.97 Score=43.95 Aligned_cols=109 Identities=16% Similarity=0.149 Sum_probs=72.3
Q ss_pred cHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhc-CCcEEE-EeecCCCCHHHHHHHHhcCCcEEEEcc------
Q 020013 24 GPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT-ERPFGV-GVVLAFPHNENIKAILSEKVAVLQVSW------ 95 (332)
Q Consensus 24 ~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~-~~p~gv-nl~~~~~~~~~~~~~~~~~~~~I~~~~------ 95 (332)
..+.+..+.++|.-.+........++...+.++++++.+ +.|+.+ ++.. .+.++.+.+.|+|+|.++.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t----~~~a~~l~~aGad~I~vg~~~G~~~ 331 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVT----AAQAKNLIDAGVDGLRVGMGCGSIC 331 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECS----HHHHHHHHHHTCSEEEECSSCSCCB
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecccch----HHHHHHHHHcCCCEEEECCCCCccc
Confidence 456666666777544442111223445567788888876 678776 4432 5678888899999997742
Q ss_pred --------CCCcH---HHHHHHHh-CCCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 96 --------GEYSE---ELVLEAHS-AGVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 96 --------g~~~~---~~i~~~~~-~g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
|.+.. ..+..+++ .+++|++ .+.+.+++.+++..|+|+|.+
T Consensus 332 ~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~i 386 (514)
T 1jcn_A 332 ITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMM 386 (514)
T ss_dssp TTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred ccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeeeE
Confidence 21112 23333333 4788886 688999999999999999988
No 279
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=93.85 E-value=2.1 Score=38.95 Aligned_cols=167 Identities=16% Similarity=0.057 Sum_probs=102.2
Q ss_pred CCCcHHHHHHHHhCCCceee-----------cCC--CCCCHHHHHHHHHHHHhhc-CCcEEEEeecCCCC----HHHHHH
Q 020013 21 DISGPELVAAVANAGGLGLL-----------RAP--DWEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPH----NENIKA 82 (332)
Q Consensus 21 g~s~~~la~avs~aGglG~i-----------~~~--~~~~~e~~~~~i~~~r~~~-~~p~gvnl~~~~~~----~~~~~~ 82 (332)
+.-|+-.+..+.++|.=.+. +.+ ...+.+++...++.+...+ +.|+-+.+-.-... .+.+..
T Consensus 45 ~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~ 124 (318)
T 1zlp_A 45 GVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRE 124 (318)
T ss_dssp EECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHH
Confidence 46677778777777621111 111 1346677777777777666 77777654322111 234566
Q ss_pred HHhcCCcEEEEccCC--------------CcHHHHHHHH---h----CCCEEEEecCC---------HHHHHHHHHcCCC
Q 020013 83 ILSEKVAVLQVSWGE--------------YSEELVLEAH---S----AGVKVVPQVGS---------FDEARKAVNAGVD 132 (332)
Q Consensus 83 ~~~~~~~~I~~~~g~--------------~~~~~i~~~~---~----~g~~v~~~v~s---------~~~a~~a~~~g~D 132 (332)
+.+.|+..|.+--+. +..+.+++++ + .+..|..-... ++.++...++|+|
T Consensus 125 l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd 204 (318)
T 1zlp_A 125 LISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAGAD 204 (318)
T ss_dssp HHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCC
Confidence 778999999873111 1124444432 2 35677765543 2344556789999
Q ss_pred EEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEE---eecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 133 AIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPII---AAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 133 ~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvi---aaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
.|++++. ++...+.++.+.+ ++|++ ..+|-...-+..+.-++|..-|..|...+.
T Consensus 205 ~i~~e~~----------~~~e~~~~i~~~l---~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~r 262 (318)
T 1zlp_A 205 ATFVEAP----------ANVDELKEVSAKT---KGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAVY 262 (318)
T ss_dssp EEEECCC----------CSHHHHHHHHHHS---CSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHHH
T ss_pred EEEEcCC----------CCHHHHHHHHHhc---CCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHH
Confidence 9999543 2356778888888 79984 334432223466777899999999887663
No 280
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=93.75 E-value=0.68 Score=41.34 Aligned_cols=166 Identities=14% Similarity=0.132 Sum_probs=97.4
Q ss_pred CCCcHHHHHHHHhCCC---------cee-ecCC--CCCCHHHHHHHHHHHHhhcCCcEEEEeecCCC-C----HHHHHHH
Q 020013 21 DISGPELVAAVANAGG---------LGL-LRAP--DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFP-H----NENIKAI 83 (332)
Q Consensus 21 g~s~~~la~avs~aGg---------lG~-i~~~--~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~-~----~~~~~~~ 83 (332)
+.-+.-.+..+.++|. ++. ++.+ ...+.+++...++.+...++.|+-+.+-.-.. . .+.+..+
T Consensus 22 ~a~D~~sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~~l 101 (275)
T 2ze3_A 22 NAWDVASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHF 101 (275)
T ss_dssp EESSHHHHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHHHH
Confidence 4567777777777762 111 1111 13466777777777777777887776532221 1 2345667
Q ss_pred HhcCCcEEEEccCC--------CcHHHHHH---HHhC----CCEEE--EecCC------------HHH----HHHHHHcC
Q 020013 84 LSEKVAVLQVSWGE--------YSEELVLE---AHSA----GVKVV--PQVGS------------FDE----ARKAVNAG 130 (332)
Q Consensus 84 ~~~~~~~I~~~~g~--------~~~~~i~~---~~~~----g~~v~--~~v~s------------~~~----a~~a~~~g 130 (332)
.+.|+..|.+--+. +..+.+++ +++. |++++ .-... .++ ++...++|
T Consensus 102 ~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAG 181 (275)
T 2ze3_A 102 AALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAG 181 (275)
T ss_dssp HHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCC
Confidence 78999999884222 12234443 3333 65543 33222 233 33456789
Q ss_pred CCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 131 VDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 131 ~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
+|.|++++. ++...+.++.+.+ ++|+-...+= ..-++.+.-++|..-|..|...+.
T Consensus 182 Ad~i~~e~~----------~~~~~~~~i~~~~---~~P~n~~~~~-~~~~~~eL~~lGv~~v~~~~~~~r 237 (275)
T 2ze3_A 182 ADGIFVPLA----------LQSQDIRALADAL---RVPLNVMAFP-GSPVPRALLDAGAARVSFGQSLML 237 (275)
T ss_dssp CSEEECTTC----------CCHHHHHHHHHHC---SSCEEEECCT-TSCCHHHHHHTTCSEEECTTHHHH
T ss_pred CCEEEECCC----------CCHHHHHHHHHhc---CCCEEEecCC-CCCCHHHHHHcCCcEEEEChHHHH
Confidence 999999542 3356778888887 6887655331 122346667799999998876553
No 281
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=93.72 E-value=0.87 Score=38.51 Aligned_cols=115 Identities=13% Similarity=0.123 Sum_probs=69.9
Q ss_pred CCcEEEEeecCCCC--HHHHHHHHhcCCcEEEEccCCCc-HHHHHHHHh-CCCEEE---EecCCHHHHHHHHHcCCCEEE
Q 020013 63 ERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSWGEYS-EELVLEAHS-AGVKVV---PQVGSFDEARKAVNAGVDAII 135 (332)
Q Consensus 63 ~~p~gvnl~~~~~~--~~~~~~~~~~~~~~I~~~~g~~~-~~~i~~~~~-~g~~v~---~~v~s~~~a~~a~~~g~D~iv 135 (332)
+.|+...+...+.. .+.++.+.+.|++.|++...++. .+.++.+.+ .+++++ ..+.+.+.+..+.+.|+|+|.
T Consensus 6 ~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~ 85 (212)
T 2v82_A 6 KLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIV 85 (212)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEE
Confidence 34555554433221 23455667789999998654332 234444433 354433 234577888999999999996
Q ss_pred EecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeee
Q 020013 136 VQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 136 v~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~ 194 (332)
+ |.. ...++... +.. +.+++.. +.|++.+..+..+|+|.|.+
T Consensus 86 ~-----~~~------~~~~~~~~-~~~---g~~~~~g--~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 86 T-----PNI------HSEVIRRA-VGY---GMTVCPG--CATATEAFTALEAGAQALKI 127 (212)
T ss_dssp C-----SSC------CHHHHHHH-HHT---TCEEECE--ECSHHHHHHHHHTTCSEEEE
T ss_pred e-----CCC------CHHHHHHH-HHc---CCCEEee--cCCHHHHHHHHHCCCCEEEE
Confidence 3 111 12333332 333 5666543 88999999999999999885
No 282
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=93.71 E-value=2.5 Score=38.96 Aligned_cols=143 Identities=12% Similarity=0.069 Sum_probs=88.0
Q ss_pred cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC-CcHHHHHHHHhCCCEEEEec--CCHHHHHHHH----HcCCCEE
Q 020013 62 TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE-YSEELVLEAHSAGVKVVPQV--GSFDEARKAV----NAGVDAI 134 (332)
Q Consensus 62 ~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~-~~~~~i~~~~~~g~~v~~~v--~s~~~a~~a~----~~g~D~i 134 (332)
++.+|-.-.| +.+.++.+.+.+++++.++.++ ....+++.+-+.|.+|+.+. .+.+|...+. +.|.+.+
T Consensus 90 ~Gi~~~st~f----D~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGmstl~Ei~~Ave~i~~~g~~vi 165 (350)
T 3g8r_A 90 NGFKAICTPF----DEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGARREDIDKVVSFMLHRGKDLT 165 (350)
T ss_dssp TTCEEEEEEC----SHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTCCHHHHHHHHHHHHTTTCCEE
T ss_pred cCCcEEeccC----CHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCCCHHHHHHHHHHHHHcCCCEE
Confidence 3454444333 4678888889999999997543 23467888888899999764 4787776654 3578877
Q ss_pred EEecCCCCcccCC-CCchhhhHHHHHHHhCCCCCcEEee----cCcCCHHHHHHHHHcCcceeeeccccccCc-------
Q 020013 135 IVQGREAGGHVIG-QDGLISLLPMVVDLIGDRDIPIIAA----GGIVDARGYVAALSLGAQGICLGTRFVASE------- 202 (332)
Q Consensus 135 vv~G~eaGGh~~~-~~~~~~ll~~i~~~~~~~~iPviaa----GGI~~~~~v~~al~~GA~gV~~GT~fl~t~------- 202 (332)
+++... +.... ....+..++.+++..+ ++||..+ |+. . .-..++.++||+ ++=--|-..+
T Consensus 166 LlhC~s--~YPt~~~~~nL~aI~~Lk~~fp--~lpVG~SdHt~g~~-~-~~~~AAvAlGA~--vIEkH~tldr~~g~D~~ 237 (350)
T 3g8r_A 166 IMHCVA--EYPTPDDHLHLARIKTLRQQYA--GVRIGYSTHEDPDL-M-EPIMLAVAQGAT--VFEKHVGLPTDQYGINN 237 (350)
T ss_dssp EEECCC--CSSCCGGGCCTTHHHHHHHHCT--TSEEEEEECCCSSC-C-HHHHHHHHTTCC--EEEEEBCCCBTTBCCCT
T ss_pred EEecCC--CCCCCcccCCHHHHHHHHHHCC--CCCEEcCCCCCCCc-c-HHHHHHHHcCCC--EEEEecCcccCCCCccc
Confidence 775431 12101 1123667888887763 5898665 333 2 223478899997 3333333333
Q ss_pred cCCCCHHHHHHHhc
Q 020013 203 ESYAHPEYKRKLVE 216 (332)
Q Consensus 203 Es~~~~~~k~~~~~ 216 (332)
-|-.++++++.+.+
T Consensus 238 ~Sl~P~ef~~lv~~ 251 (350)
T 3g8r_A 238 YSANPEQVRRWLAA 251 (350)
T ss_dssp TCBCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHH
Confidence 22245666766554
No 283
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=93.69 E-value=0.36 Score=42.65 Aligned_cols=128 Identities=21% Similarity=0.250 Sum_probs=77.8
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhC----CCceee-----cCCCCCCHHHHHHHHHHHHhhcCCcEEEEee-c
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANA----GGLGLL-----RAPDWEAPDYLRDLIRKTRSLTERPFGVGVV-L 72 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~a----GglG~i-----~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~-~ 72 (332)
+.+.+. +|+++ |-..|.++.+-+..+++. ++--.+ ....+..|| ..+.+++.+.+.+.=|-| + +
T Consensus 57 ~~~~i~-~~~~l--pntaG~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD-~~~tv~aa~~L~k~Gf~V--lpy 130 (268)
T 2htm_A 57 LLEALE-GVRLL--PNTAGARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPD-PLETLKAAERLIEEDFLV--LPY 130 (268)
T ss_dssp HHHHTT-TSEEE--EBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCC-HHHHHHHHHHHHHTTCEE--CCE
T ss_pred HHHHHh-hhhcc--CcccCCCCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcC-HHHHHHHHHHHHHCCCEE--eec
Confidence 345555 77776 544589998887777664 233333 222233443 345666666653211221 1 1
Q ss_pred CCCCHHHHHHHHhcCCcEEEE-c------cCCCcHHHHHHHHh--CC-CEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 73 AFPHNENIKAILSEKVAVLQV-S------WGEYSEELVLEAHS--AG-VKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~I~~-~------~g~~~~~~i~~~~~--~g-~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
..++....+.+.+.++++|.- + .|...+++++.+++ .+ ++|+. .+.+++++..+.+.|+|+|++
T Consensus 131 ~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlV 206 (268)
T 2htm_A 131 MGPDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLV 206 (268)
T ss_dssp ECSCHHHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEE
T ss_pred cCCCHHHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 123345667777889998843 1 11223566777777 25 77775 477999999999999999998
No 284
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=93.69 E-value=0.85 Score=42.10 Aligned_cols=89 Identities=17% Similarity=0.232 Sum_probs=63.8
Q ss_pred CHHHHHHHHHHHHhhcCCcEEEEeec--CCC-----CHHHHHHHHhcCCcEEEEccCC---------------CcHHHHH
Q 020013 47 APDYLRDLIRKTRSLTERPFGVGVVL--AFP-----HNENIKAILSEKVAVLQVSWGE---------------YSEELVL 104 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~~~p~gvnl~~--~~~-----~~~~~~~~~~~~~~~I~~~~g~---------------~~~~~i~ 104 (332)
.++.+.+.++.+++..+.|+.+.+-. ... ..+.++.+.+.|++.|.++.+. ...++++
T Consensus 110 ~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~ 189 (350)
T 3b0p_A 110 DLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVH 189 (350)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHH
Confidence 46778888999988778898885422 111 1234567778999999988421 0235667
Q ss_pred HHHhC--CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 105 EAHSA--GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 105 ~~~~~--g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
.+++. +++|+. .+.|.+++.++++ |+|+|.+
T Consensus 190 ~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~i 224 (350)
T 3b0p_A 190 RLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVML 224 (350)
T ss_dssp HHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEE
T ss_pred HHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEE
Confidence 77653 688885 4779999999998 9999988
No 285
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=93.68 E-value=0.43 Score=43.66 Aligned_cols=90 Identities=13% Similarity=0.212 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHhhc---------CCcEEEEeecCCCC---HHHHHHHHhcCCcEEEEccCC-----------------
Q 020013 47 APDYLRDLIRKTRSLT---------ERPFGVGVVLAFPH---NENIKAILSEKVAVLQVSWGE----------------- 97 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~---------~~p~gvnl~~~~~~---~~~~~~~~~~~~~~I~~~~g~----------------- 97 (332)
+++.+.+.++.+|+.+ +.|+.+.+-..... .+..+.+.+.|+|+|.++.+.
T Consensus 186 ~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg 265 (336)
T 1f76_A 186 YGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGG 265 (336)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSE
T ss_pred CHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCC
Confidence 3556677888888776 78999886543221 233567788999999876221
Q ss_pred Cc--------HHHHHHHHhC---CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 98 YS--------EELVLEAHSA---GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 98 ~~--------~~~i~~~~~~---g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
.+ .++++.+++. +++|+. .+.+.+++.++++.|||.|-+
T Consensus 266 ~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~i 317 (336)
T 1f76_A 266 LSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQI 317 (336)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred cCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEe
Confidence 00 1445555542 678775 478999999999999999987
No 286
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=93.61 E-value=0.58 Score=41.23 Aligned_cols=118 Identities=18% Similarity=0.232 Sum_probs=71.7
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHHH----HHHHhCCCEEEEecCC-HHH-------------HHHHHHcCCC-
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEELV----LEAHSAGVKVVPQVGS-FDE-------------ARKAVNAGVD- 132 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~i----~~~~~~g~~v~~~v~s-~~~-------------a~~a~~~g~D- 132 (332)
....+.+.|++++.++ |+. ..+.+ +.+.+.|+.++..++. .++ ...++ .+.+
T Consensus 82 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~V~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l-~~~~~ 159 (254)
T 3m9y_A 82 SPVALADLGVKYVVIGHSERRELFHE-TDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAV-AGLSE 159 (254)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHHSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHH-TTCCH
T ss_pred CHHHHHHcCCCEEEECcccccCccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHH-hcCCH
Confidence 4667888999999985 454 34443 4456789998888873 332 11122 2332
Q ss_pred ------EEEEecCCCCcccCCCCch-------hhhHHHHHHHh-C---CCCCcEEeecCcCCHHHHHHHH-HcCcceeee
Q 020013 133 ------AIIVQGREAGGHVIGQDGL-------ISLLPMVVDLI-G---DRDIPIIAAGGIVDARGYVAAL-SLGAQGICL 194 (332)
Q Consensus 133 ------~ivv~G~eaGGh~~~~~~~-------~~ll~~i~~~~-~---~~~iPviaaGGI~~~~~v~~al-~~GA~gV~~ 194 (332)
.|-.+..-+=|. |...+ ...|++..... . ..+++|+-.|+| +++|+.+.+ ..+.||+.+
T Consensus 160 ~~~~~vvIAYEPvWAIGT--G~~At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV-~~~N~~~l~~~~diDG~LV 236 (254)
T 3m9y_A 160 DQLKSVVIAYEPIWAIGT--GKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSV-KPNNIKEYMAQTDIDGALV 236 (254)
T ss_dssp HHHHHCEEEECCGGGCC----CCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECSCC-CTTTHHHHHTSTTCCEEEE
T ss_pred HHhCCEEEEECChhhhcC--CCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCc-CHHHHHHHHcCCCCCeEEe
Confidence 343455445443 22122 22233322111 1 026899999999 999999999 579999999
Q ss_pred ccccccC
Q 020013 195 GTRFVAS 201 (332)
Q Consensus 195 GT~fl~t 201 (332)
|.+-|..
T Consensus 237 GgASL~~ 243 (254)
T 3m9y_A 237 GGASLKV 243 (254)
T ss_dssp SGGGSSH
T ss_pred eHHhhCH
Confidence 9996643
No 287
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=93.58 E-value=0.33 Score=42.83 Aligned_cols=118 Identities=18% Similarity=0.269 Sum_probs=71.8
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHH----HHHHHhCCCEEEEecC-CHHH--H-----------HHHHHcCC--
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEEL----VLEAHSAGVKVVPQVG-SFDE--A-----------RKAVNAGV-- 131 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~----i~~~~~~g~~v~~~v~-s~~~--a-----------~~a~~~g~-- 131 (332)
....+.+.|++++.++ |+. ..+. ++...+.|+.++..++ +.++ + +.++ .+.
T Consensus 80 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l-~~~~~ 157 (255)
T 1b9b_A 80 SPLMLQEIGVEYVIVGHSERRRIFKE-DDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVREGF-YGLDK 157 (255)
T ss_dssp CHHHHHTTTCCEEEESCHHHHHTSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHTCHHHHHHHHHHHHH-TTCCH
T ss_pred CHHHHHHcCCCEEEECchhhccccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHH-hcCCH
Confidence 4567888999999985 454 3444 4556678999888887 3332 1 1122 222
Q ss_pred ----CEEEE-ecCCCCcccCCCCch-------hhhHHHHHHH-hC---CCCCcEEeecCcCCHHHHHHHH-HcCcceeee
Q 020013 132 ----DAIIV-QGREAGGHVIGQDGL-------ISLLPMVVDL-IG---DRDIPIIAAGGIVDARGYVAAL-SLGAQGICL 194 (332)
Q Consensus 132 ----D~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~~-~~---~~~iPviaaGGI~~~~~v~~al-~~GA~gV~~ 194 (332)
..+++ +..-+=|. |...+ ...+++.... +. ..+++|+..|+| +++|+.+.+ ..+.||+.+
T Consensus 158 ~~~~~~vIAYEPvWAIGT--G~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LV 234 (255)
T 1b9b_A 158 EEAKRVVIAYEPVWAIGT--GRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSI-KPDNFLGLIVQKDIDGGLV 234 (255)
T ss_dssp HHHTTCEEEECCGGGSSS--SCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHSEEEEESSC-CHHHHTTTSSSTTCCEEEE
T ss_pred HHcCCEEEEECCHHHhCC--CCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCcC-CHHHHHHHHcCCCCCeeEe
Confidence 33443 44444332 12122 2333332211 10 014899999999 889999998 579999999
Q ss_pred ccccccC
Q 020013 195 GTRFVAS 201 (332)
Q Consensus 195 GT~fl~t 201 (332)
|++-+..
T Consensus 235 GgASLka 241 (255)
T 1b9b_A 235 GGASLKE 241 (255)
T ss_dssp SGGGTST
T ss_pred ehHhhcC
Confidence 9997754
No 288
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=93.56 E-value=0.65 Score=41.11 Aligned_cols=125 Identities=15% Similarity=0.107 Sum_probs=73.3
Q ss_pred CccceecCCCCCCCCcHH----HHHHHHhCCCceeecC---CC-CCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHH
Q 020013 9 FEYGIVQAPLGPDISGPE----LVAAVANAGGLGLLRA---PD-WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENI 80 (332)
Q Consensus 9 ~~~Pii~apM~~g~s~~~----la~avs~aGglG~i~~---~~-~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~ 80 (332)
++.|++..+. +..+++ ++....++|+-+++.. +. ....++..+.++.++++....+-+-.+. .+..+.+
T Consensus 64 ~~~~~~pn~~--~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~-~~~~~~a 140 (264)
T 1xm3_A 64 SKYTLLPNTA--GASTAEEAVRIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYT-SDDVVLA 140 (264)
T ss_dssp GGSEEEEECT--TCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEE-CSCHHHH
T ss_pred cCCeEcCCcc--ccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEc-CCCHHHH
Confidence 4566654443 356665 5555667777777421 11 1112445566777766532122222111 2234567
Q ss_pred HHHHhcCCcEEEEc---cC----CCcHHHHHHHHh-CCCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 81 KAILSEKVAVLQVS---WG----EYSEELVLEAHS-AGVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 81 ~~~~~~~~~~I~~~---~g----~~~~~~i~~~~~-~g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
+.+.+.++++|... .| ....+.++.+++ .+++++. .+.+.+++..+.+.|+|+|++
T Consensus 141 ~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViV 206 (264)
T 1xm3_A 141 RKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLL 206 (264)
T ss_dssp HHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEE
Confidence 77888899988431 12 112456666665 3666665 477899999999999999999
No 289
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=93.56 E-value=0.14 Score=46.69 Aligned_cols=78 Identities=28% Similarity=0.363 Sum_probs=49.2
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~f 198 (332)
++...+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+.=|=.+-++.. .+-++|||++++-+.+
T Consensus 50 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (314)
T 3qze_A 50 VDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG-RIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPY 128 (314)
T ss_dssp HHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 345668899999997664433321212224566666666643 68988754433444433 3445899999999987
Q ss_pred ccC
Q 020013 199 VAS 201 (332)
Q Consensus 199 l~t 201 (332)
...
T Consensus 129 y~~ 131 (314)
T 3qze_A 129 YNK 131 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 764
No 290
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=93.54 E-value=4.1 Score=36.74 Aligned_cols=135 Identities=16% Similarity=0.186 Sum_probs=85.4
Q ss_pred CCcEEEEeecCCCCHHHHHHHHhc--------CCcEEEEccCCCcH--------HHHHHHHhCCCEEEE-----------
Q 020013 63 ERPFGVGVVLAFPHNENIKAILSE--------KVAVLQVSWGEYSE--------ELVLEAHSAGVKVVP----------- 115 (332)
Q Consensus 63 ~~p~gvnl~~~~~~~~~~~~~~~~--------~~~~I~~~~g~~~~--------~~i~~~~~~g~~v~~----------- 115 (332)
+.|+.+++=--. ..+.+..+++. |...|-+.....|. ++++.++..|+.|=.
T Consensus 82 ~VPVaLHlDHg~-~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edg 160 (306)
T 3pm6_A 82 SVPITLHLDHAQ-DPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDG 160 (306)
T ss_dssp SSCEEEEEEEEC-CHHHHHHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTT
T ss_pred CCCEEEEcCCCC-CHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCC
Confidence 445555432111 24566677777 77777665333332 455666666665421
Q ss_pred ---------ecCCHHHHHHHHHcCCCEEEE-ecCCCCcccC-CCCchhhhHHHHHHHhCCCCCcEEeecCcC-CHHHHHH
Q 020013 116 ---------QVGSFDEARKAVNAGVDAIIV-QGREAGGHVI-GQDGLISLLPMVVDLIGDRDIPIIAAGGIV-DARGYVA 183 (332)
Q Consensus 116 ---------~v~s~~~a~~a~~~g~D~ivv-~G~eaGGh~~-~~~~~~~ll~~i~~~~~~~~iPviaaGGI~-~~~~v~~ 183 (332)
..++++++....+.|+|.+-+ .|.-=|-... .+.-.+.+|.++.+.+.. ++|++.-||=+ ..+++.+
T Consensus 161 v~~~~~~~~~yT~Peea~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~-~vpLVlHGgSG~p~e~i~~ 239 (306)
T 3pm6_A 161 VQDTVDLEGVLTTPEESEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGE-RVGLVLHGADPFTKEIFEK 239 (306)
T ss_dssp BCCCTTCCCBCCCHHHHHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTT-TSEEEECSCTTCCHHHHHH
T ss_pred ccccccccccCCCHHHHHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCC-CCCEEeeCCCCCCHHHHHH
Confidence 236799999988999997765 2321111111 123458889999988732 59999887543 4567899
Q ss_pred HHHcCcceeeeccccc
Q 020013 184 ALSLGAQGICLGTRFV 199 (332)
Q Consensus 184 al~~GA~gV~~GT~fl 199 (332)
++.+|..-|=++|-+.
T Consensus 240 ai~~GV~KiNi~Tdl~ 255 (306)
T 3pm6_A 240 CIERGVAKVNVNRAVN 255 (306)
T ss_dssp HHHTTEEEEEESHHHH
T ss_pred HHHcCCeEEEeChHHH
Confidence 9999999999999764
No 291
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=93.47 E-value=0.32 Score=42.61 Aligned_cols=97 Identities=21% Similarity=0.243 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEEE-ee-----cCCCCHHHHHHHHhcCCcEEEEccCCC--cH----HHHHHHHhCCCEE
Q 020013 46 EAPDYLRDLIRKTRSLTERPFGVG-VV-----LAFPHNENIKAILSEKVAVLQVSWGEY--SE----ELVLEAHSAGVKV 113 (332)
Q Consensus 46 ~~~e~~~~~i~~~r~~~~~p~gvn-l~-----~~~~~~~~~~~~~~~~~~~I~~~~g~~--~~----~~i~~~~~~g~~v 113 (332)
.+.+.+++.++..++. +.++..+ .+ .....+++++.+.+.|.++|.++-|.. |. ++++.+++.|.++
T Consensus 52 ~~~~~l~eki~l~~~~-gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v 130 (251)
T 1qwg_A 52 IDRDVVKEKINYYKDW-GIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMV 130 (251)
T ss_dssp SCHHHHHHHHHHHHTT-TCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEE
T ss_pred cCHHHHHHHHHHHHHc-CCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEE
Confidence 4566788888888764 2222211 00 011236789999999999999986541 22 4677788899999
Q ss_pred EEecCC--H------------HHHHHHHHcCCCEEEEecCCCCc
Q 020013 114 VPQVGS--F------------DEARKAVNAGVDAIIVQGREAGG 143 (332)
Q Consensus 114 ~~~v~s--~------------~~a~~a~~~g~D~ivv~G~eaGG 143 (332)
+..++. . +.+++.+++|+|.|++++.|+|-
T Consensus 131 ~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~ 174 (251)
T 1qwg_A 131 LTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGK 174 (251)
T ss_dssp EEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCTTTCC
T ss_pred eeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeeecccC
Confidence 987652 2 34556788999999999999874
No 292
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=93.40 E-value=0.87 Score=40.87 Aligned_cols=90 Identities=14% Similarity=0.168 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHhhcCCcEEEEeecCC-CCHHHHHHHHhcCCcEEEEcc--------C-C--------------Cc---
Q 020013 47 APDYLRDLIRKTRSLTERPFGVGVVLAF-PHNENIKAILSEKVAVLQVSW--------G-E--------------YS--- 99 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~~~p~gvnl~~~~-~~~~~~~~~~~~~~~~I~~~~--------g-~--------------~~--- 99 (332)
+++.+.+.++++++..+.|+.+.+.... ...+.++.+.+.|+|+|.+.. . . +.
T Consensus 148 ~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~ 227 (311)
T 1ep3_A 148 DPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKP 227 (311)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchH
Confidence 5677788899998877889888765322 225567788899999998831 0 0 00
Q ss_pred --HHHHHHHHhC-CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 100 --EELVLEAHSA-GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 100 --~~~i~~~~~~-g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
.++++.+++. .++|+. .+.+.+++.++.+.|+|+|.+
T Consensus 228 ~~~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~v 269 (311)
T 1ep3_A 228 VALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAV 269 (311)
T ss_dssp HHHHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 2556666654 677775 477999999999999999988
No 293
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.39 E-value=0.1 Score=47.28 Aligned_cols=121 Identities=14% Similarity=0.174 Sum_probs=67.9
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-cCcCCHHHHH---HHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-GGIVDARGYV---AALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-GGI~~~~~v~---~al~~GA~gV~~GT~f 198 (332)
++...+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+. |+.++.+.+. .+-++|||++++-+.+
T Consensus 31 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 109 (300)
T 3eb2_A 31 CDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQR-RVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEA 109 (300)
T ss_dssp HHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred HHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 445668899999986654333321112234566666666643 6898764 4444433332 3445899999999988
Q ss_pred ccCc-cCCCCHHHHHHHhcCCCceEEEEecccCCCCCCceeecChHHHhhhc
Q 020013 199 VASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWKN 249 (332)
Q Consensus 199 l~t~-Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~ 249 (332)
.... +...-+ |=+.|.++.+.- ..+++ .|++.+.-+...++.++.+
T Consensus 110 y~~~~~~~l~~-~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La~ 156 (300)
T 3eb2_A 110 YFPLKDAQIES-YFRAIADAVEIP-VVIYT---NPQFQRSDLTLDVIARLAE 156 (300)
T ss_dssp SSCCCHHHHHH-HHHHHHHHCSSC-EEEEE---CTTTCSSCCCHHHHHHHHT
T ss_pred CCCCCHHHHHH-HHHHHHHHCCCC-EEEEE---CccccCCCCCHHHHHHHHc
Confidence 7642 111122 223344444433 23454 3566666677666666543
No 294
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=93.34 E-value=4 Score=35.99 Aligned_cols=138 Identities=20% Similarity=0.192 Sum_probs=84.3
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC-CcHHHHHHHHhCCCEEEEecC---CHHHHHHHH-
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE-YSEELVLEAHSAGVKVVPQVG---SFDEARKAV- 127 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~-~~~~~i~~~~~~g~~v~~~v~---s~~~a~~a~- 127 (332)
++++++++..+.|+..-++- ...++.+.+. +|++.++.+. ....+++.+-+.+.+|+.+-+ ++++...+.
T Consensus 77 ~~l~~~~~~~Gl~~~te~~d----~~~~~~l~~~-vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~ 151 (262)
T 1zco_A 77 RWMREAADEYGLVTVTEVMD----TRHVELVAKY-SDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAE 151 (262)
T ss_dssp HHHHHHHHHHTCEEEEECCC----GGGHHHHHHH-CSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEeeCC----HHhHHHHHhh-CCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHH
Confidence 34444545556777665443 4567777777 9999997543 234567777778899886643 788877665
Q ss_pred ---HcCC-CEEEEe-cCCCC-cccCCCCchhhhHHHHHHHhCCCCCcEEee----cCcCC--HHHHHHHHHcCcceeeec
Q 020013 128 ---NAGV-DAIIVQ-GREAG-GHVIGQDGLISLLPMVVDLIGDRDIPIIAA----GGIVD--ARGYVAALSLGAQGICLG 195 (332)
Q Consensus 128 ---~~g~-D~ivv~-G~eaG-Gh~~~~~~~~~ll~~i~~~~~~~~iPviaa----GGI~~--~~~v~~al~~GA~gV~~G 195 (332)
..|. +.++++ |.... +.. .....+..++.+++.. ++||+.. +|..+ +.-..++.++||+|+++=
T Consensus 152 ~i~~~Gn~~i~L~~RG~~~~~~y~-~~~v~L~ai~~lk~~~---~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE 227 (262)
T 1zco_A 152 YIMAQGNENVILCERGIRTFETAT-RFTLDISAVPVVKELS---HLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVE 227 (262)
T ss_dssp HHHTTTCCCEEEEECCBCCSCCSS-SSBCCTTHHHHHHHHB---SSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHCCCCeEEEEECCCCCCCCcC-hhhcCHHHHHHHHhhh---CCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEE
Confidence 3464 666664 31110 111 1123456677777765 6898653 33311 022456788999999998
Q ss_pred cccc
Q 020013 196 TRFV 199 (332)
Q Consensus 196 T~fl 199 (332)
+-|-
T Consensus 228 ~H~~ 231 (262)
T 1zco_A 228 VHPE 231 (262)
T ss_dssp BCSS
T ss_pred ecCC
Confidence 8764
No 295
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.27 E-value=0.13 Score=46.98 Aligned_cols=119 Identities=16% Similarity=0.168 Sum_probs=65.6
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~f 198 (332)
++...+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+.=|=.+-++.. .+-.+|||++++-+.+
T Consensus 51 v~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 129 (315)
T 3na8_A 51 IERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAH-RVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPIS 129 (315)
T ss_dssp HHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 445668899999997664333321112234566666666643 68988754432444433 3446899999999988
Q ss_pred ccCc-cCCCCHHHHHHHhcCCCceEEEEecccCCCCCCceeecChHHHhh
Q 020013 199 VASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNW 247 (332)
Q Consensus 199 l~t~-Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~ 247 (332)
.... +...-+ |=+.|.++.+.- ..+++ .|++.+.-+...++.++
T Consensus 130 y~~~s~~~l~~-~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 130 YWKLNEAEVFQ-HYRAVGEAIGVP-VMLYN---NPGTSGIDMSVELILRI 174 (315)
T ss_dssp SSCCCHHHHHH-HHHHHHHHCSSC-EEEEE---CHHHHSCCCCHHHHHHH
T ss_pred CCCCCHHHHHH-HHHHHHHhCCCc-EEEEe---CcchhCcCCCHHHHHHH
Confidence 7642 111112 223333343433 23443 23444445665666665
No 296
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=93.27 E-value=0.21 Score=45.35 Aligned_cols=78 Identities=24% Similarity=0.439 Sum_probs=48.6
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~f 198 (332)
++...+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+.=|=.+-+++. .+-++|||++++-+.+
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~ 117 (306)
T 1o5k_A 39 VRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG-KIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPY 117 (306)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 445668899999997664333321212234566666666643 68987544432434433 3345899999999998
Q ss_pred ccC
Q 020013 199 VAS 201 (332)
Q Consensus 199 l~t 201 (332)
...
T Consensus 118 y~~ 120 (306)
T 1o5k_A 118 YNK 120 (306)
T ss_dssp SSC
T ss_pred CCC
Confidence 754
No 297
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=93.25 E-value=0.61 Score=41.01 Aligned_cols=117 Identities=21% Similarity=0.279 Sum_probs=70.5
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHH----HHHHHHhCCCEEEEecCCHHHHH--------------HHHHcCC--
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEE----LVLEAHSAGVKVVPQVGSFDEAR--------------KAVNAGV-- 131 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~----~i~~~~~~g~~v~~~v~s~~~a~--------------~a~~~g~-- 131 (332)
....+.+.|++++.++ |+. ..+ -++.+.+.|+.++..++...+-+ ..+ .+.
T Consensus 80 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l-~~~~~ 157 (251)
T 2vxn_A 80 SMPILKDIGVHWVILGHSERRTYYGE-TDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIA-AKLTK 157 (251)
T ss_dssp BHHHHHHTTCCEEEESCHHHHHHSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHH-TTCCT
T ss_pred CHHHHHHcCCCEEEECchhhhcccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHH-hcCCH
Confidence 4567888999999985 454 333 23445678999988887432222 112 232
Q ss_pred ----CEEEE-ecCCCCcccCCCCch-------hhhHHHHHH-HhC---CCCCcEEeecCcCCHHHHHHHHH-cCcceeee
Q 020013 132 ----DAIIV-QGREAGGHVIGQDGL-------ISLLPMVVD-LIG---DRDIPIIAAGGIVDARGYVAALS-LGAQGICL 194 (332)
Q Consensus 132 ----D~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~-~~~---~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~ 194 (332)
..+|+ +..-+=|. |...+ ...+++... .+. ..+++|+..|+| +++|+.+.+. .+.||+.+
T Consensus 158 ~~~~~~vIAYEPvWAIGT--G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LV 234 (251)
T 2vxn_A 158 DAWNQVVLAYEPVWAIGT--GKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSV-NAANAATLYAKPDINGFLV 234 (251)
T ss_dssp GGGGGEEEEECCGGGSSS--SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSC-CTTTHHHHHTSTTCCEEEE
T ss_pred HHhCCEEEEECCHHHhCC--CCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCc-CHhHHHHHhcCCCCCeeee
Confidence 34444 44444443 22222 222332211 110 014899999999 8899988886 68999999
Q ss_pred cccccc
Q 020013 195 GTRFVA 200 (332)
Q Consensus 195 GT~fl~ 200 (332)
|++-+.
T Consensus 235 GgAsL~ 240 (251)
T 2vxn_A 235 GGASLK 240 (251)
T ss_dssp SGGGGS
T ss_pred cHHHHH
Confidence 999876
No 298
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=93.24 E-value=1.2 Score=38.08 Aligned_cols=137 Identities=18% Similarity=0.151 Sum_probs=85.4
Q ss_pred HHHHHHHHhhcCCcEEEEeecCCCCHHHHHH---HHhcCCcEEE-EccCCCcHHHHHHHHhCCCEEEEe-cCCHHHHHHH
Q 020013 52 RDLIRKTRSLTERPFGVGVVLAFPHNENIKA---ILSEKVAVLQ-VSWGEYSEELVLEAHSAGVKVVPQ-VGSFDEARKA 126 (332)
Q Consensus 52 ~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~---~~~~~~~~I~-~~~g~~~~~~i~~~~~~g~~v~~~-v~s~~~a~~a 126 (332)
.+.++++.+..+.|+.+-++.. ..+..++. +.+....++. +..-..--+.++.+.+.|+++-.+ +-|..++..+
T Consensus 41 ~~~~~eI~~~v~G~Vs~EV~a~-d~e~mi~ea~~l~~~~~nv~IKIP~T~eGl~A~~~L~~~GI~vn~TlifS~~Qa~~A 119 (212)
T 3r8r_A 41 HDRLREITDVVKGSVSAEVISL-KAEEMIEEGKELAKIAPNITVKIPMTSDGLKAVRALTDLGIKTNVTLIFNANQALLA 119 (212)
T ss_dssp HHHHHHHHHHCCSCEEEECCCS-SHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHTTCCEEEEEECSHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEecC-CHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHH
Confidence 3455666666677888777432 22333333 3344455442 332111125677888899998654 6799999999
Q ss_pred HHcCCCEEEE-ecC--CCCcccCCCCchhhhHHHHHHHhCCC-CCcEEeecCcCCHHHHHHHHHcCcceeeec
Q 020013 127 VNAGVDAIIV-QGR--EAGGHVIGQDGLISLLPMVVDLIGDR-DIPIIAAGGIVDARGYVAALSLGAQGICLG 195 (332)
Q Consensus 127 ~~~g~D~ivv-~G~--eaGGh~~~~~~~~~ll~~i~~~~~~~-~iPviaaGGI~~~~~v~~al~~GA~gV~~G 195 (332)
.++|+++|-. -|+ +. |+ ..+.++.++.+.++.. --..|.+-.+.+..++.++..+|||.+-+.
T Consensus 120 a~AGa~yISPfvgRi~d~-~~-----dG~~~v~~i~~~~~~~~~~t~ilaAS~R~~~~v~~~a~~G~d~~Tip 186 (212)
T 3r8r_A 120 ARAGATYVSPFLGRLDDI-GH-----NGLDLISEVKQIFDIHGLDTQIIAASIRHPQHVTEAALRGAHIGTMP 186 (212)
T ss_dssp HHHTCSEEEEBHHHHHHT-TS-----CHHHHHHHHHHHHHHHTCCCEEEEBSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHcCCeEEEeccchhhhc-CC-----ChHHHHHHHHHHHHHcCCCCEEEEecCCCHHHHHHHHHcCCCEEEcC
Confidence 9999999865 232 11 11 2355666666554311 134566677889999999999999987763
No 299
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=93.23 E-value=3.7 Score=36.71 Aligned_cols=170 Identities=15% Similarity=0.101 Sum_probs=96.5
Q ss_pred CCCcHHHHHHHHhCCCceeec--CCC-CCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC
Q 020013 21 DISGPELVAAVANAGGLGLLR--APD-WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE 97 (332)
Q Consensus 21 g~s~~~la~avs~aGglG~i~--~~~-~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~ 97 (332)
..++|+.+..+..+|. .++. ... -...+.+...++.+.. .+.+.-|-+ +..+...++.+++.+++.|.+..=.
T Consensus 46 ~~~~p~~~e~a~~~Ga-D~v~lDlEh~~~~~~~~~~~l~a~~~-~~~~~~VRv--~~~d~~di~~~ld~ga~~ImlP~V~ 121 (287)
T 2v5j_A 46 GLSSSYSAELLAGAGF-DWLLIDGEHAPNNVQTVLTQLQAIAP-YPSQPVVRP--SWNDPVQIKQLLDVGTQTLLVPMVQ 121 (287)
T ss_dssp CSCCHHHHHHHHTSCC-SEEEEESSSSSCCHHHHHHHHHHHTT-SSSEEEEEC--SSSCHHHHHHHHHTTCCEEEESCCC
T ss_pred ECCCHHHHHHHHhCCC-CEEEEeCCCccchHHHHHHHHHHHHh-cCCCEEEEE--CCCCHHHHHHHHhCCCCEEEeCCCC
Confidence 3578888888877774 3332 221 1234445544444432 234444443 2334557888889999999887533
Q ss_pred CcHHHHHHHHh---------------------------------CCCEEEEecCCHHHHHHHH---H-cCCCEEEEecC-
Q 020013 98 YSEELVLEAHS---------------------------------AGVKVVPQVGSFDEARKAV---N-AGVDAIIVQGR- 139 (332)
Q Consensus 98 ~~~~~i~~~~~---------------------------------~g~~v~~~v~s~~~a~~a~---~-~g~D~ivv~G~- 139 (332)
.+.+ ++.+.+ ..+.++..+-+++-+..+. . .|+|+|.+-..
T Consensus 122 saee-a~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~deIaa~~~vD~l~iG~~D 200 (287)
T 2v5j_A 122 NADE-AREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFIGPAD 200 (287)
T ss_dssp SHHH-HHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHHHHHTSTTEEEEEECHHH
T ss_pred CHHH-HHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHHHHhCcCCCCEEEECHHH
Confidence 3333 333321 0267888888876554432 2 27899887211
Q ss_pred ---CCCcccCCC--CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccc
Q 020013 140 ---EAGGHVIGQ--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 140 ---eaGGh~~~~--~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~f 198 (332)
+. |+.+.. ......+.++..+.+..++|+.... .+++.+..++.+|++.+.+|+-.
T Consensus 201 Ls~~l-g~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~~--~d~~~a~~~~~~G~~~~s~~~d~ 261 (287)
T 2v5j_A 201 LSADM-GYAGNPQHPEVQAAIEQAIVQIRESGKAPGILI--ANEQLAKRYLELGALFVAVGVDT 261 (287)
T ss_dssp HHHHT-TSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEEC--CCHHHHHHHHHTTCSEEEEEEHH
T ss_pred HHHHh-CCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEec--CCHHHHHHHHHhCCCEEEECcHH
Confidence 11 222111 1233444555444322357764433 38899999999999999999753
No 300
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=93.22 E-value=1 Score=35.16 Aligned_cols=83 Identities=18% Similarity=0.096 Sum_probs=59.3
Q ss_pred HHHHhCC-CEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH
Q 020013 104 LEAHSAG-VKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 104 ~~~~~~g-~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v 181 (332)
+.+.+.| ..++..+.+.+++.... +..+|.|++.-.-.+ ...+.++..+++... .+|||+-.+-.+.+.+
T Consensus 33 ~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~------~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~ 104 (152)
T 3eul_A 33 RALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPG------MDGAQVAAAVRSYEL--PTRVLLISAHDEPAIV 104 (152)
T ss_dssp HHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSS------SCHHHHHHHHHHTTC--SCEEEEEESCCCHHHH
T ss_pred HHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCC------CCHHHHHHHHHhcCC--CCeEEEEEccCCHHHH
Confidence 3444555 45566788888887654 567999998533211 234677888876543 6899998888899999
Q ss_pred HHHHHcCcceeee
Q 020013 182 VAALSLGAQGICL 194 (332)
Q Consensus 182 ~~al~~GA~gV~~ 194 (332)
.+++.+||+++..
T Consensus 105 ~~~~~~g~~~~l~ 117 (152)
T 3eul_A 105 YQALQQGAAGFLL 117 (152)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHHcCCCEEEe
Confidence 9999999998764
No 301
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=93.18 E-value=0.062 Score=46.42 Aligned_cols=98 Identities=12% Similarity=0.170 Sum_probs=66.3
Q ss_pred ecCCHHHHHHHHHcCCCEEEE-ecCCCCcccCCCCchhhhHHHHH---HHhCCCCCcEEe-----ecCcCCH--------
Q 020013 116 QVGSFDEARKAVNAGVDAIIV-QGREAGGHVIGQDGLISLLPMVV---DLIGDRDIPIIA-----AGGIVDA-------- 178 (332)
Q Consensus 116 ~v~s~~~a~~a~~~g~D~ivv-~G~eaGGh~~~~~~~~~ll~~i~---~~~~~~~iPvia-----aGGI~~~-------- 178 (332)
.+.|++.+..|++.|+|-|=+ .+...||.+ +++.++..++ +.+ ++||.+ .|+....
T Consensus 7 c~~s~~~a~~A~~~GAdRIELc~~L~~GGlT----PS~g~i~~~~~~~~~~---~ipV~vMIRPR~GdF~Ys~~E~~~M~ 79 (224)
T 2bdq_A 7 CAENLTDLTRLDKAIISRVELCDNLAVGGTT----PSYGVIKEANQYLHEK---GISVAVMIRPRGGNFVYNDLELRIME 79 (224)
T ss_dssp EEETTTTGGGCCTTTCCEEEEEBCGGGTCBC----CCHHHHHHHHHHHHHT---TCEEEEECCSSSSCSCCCHHHHHHHH
T ss_pred EECCHHHHHHHHHcCCCEEEEcCCcccCCcC----CCHHHHHHHHHhhhhc---CCceEEEECCCCCCCcCCHHHHHHHH
Confidence 456788899999999999976 444556654 4566777776 666 788765 3444332
Q ss_pred HHHHHHHHcCcceeeeccccccCccCCCCHHHHHHHhc-CCCceEE
Q 020013 179 RGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVE-MDKTEYT 223 (332)
Q Consensus 179 ~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~~-~~~t~~t 223 (332)
+|+..+.++|||||++|-- +++-.+....-+.+++ +++...|
T Consensus 80 ~Di~~~~~~GadGvV~G~L---t~dg~iD~~~~~~Li~~a~~~~vT 122 (224)
T 2bdq_A 80 EDILRAVELESDALVLGIL---TSNNHIDTEAIEQLLPATQGLPLV 122 (224)
T ss_dssp HHHHHHHHTTCSEEEECCB---CTTSSBCHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCEEEEeeE---CCCCCcCHHHHHHHHHHhCCCeEE
Confidence 3566777899999999943 6666677666555555 4554433
No 302
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=93.16 E-value=1.7 Score=32.01 Aligned_cols=83 Identities=14% Similarity=0.103 Sum_probs=58.8
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.++..|..++..+.+.+++.... +..+|.|++.-.-.+ ...+.++.++++..+ ++|+|.-.+-.+.+...
T Consensus 20 ~~l~~~g~~vv~~~~~~~~a~~~~~~~~~dlil~D~~l~~------~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~ 91 (120)
T 1tmy_A 20 DIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPE------MNGIDAIKEIMKIDP--NAKIIVCSAMGQQAMVI 91 (120)
T ss_dssp HHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGG------GCHHHHHHHHHHHCT--TCCEEEEECTTCHHHHH
T ss_pred HHHhhcCcEEEEEECCHHHHHHHHHhcCCCEEEEeCCCCC------CcHHHHHHHHHhhCC--CCeEEEEeCCCCHHHHH
Confidence 445567888777788888776654 457999998532111 123567777776532 68999888888888899
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
+++..||+++..
T Consensus 92 ~~~~~g~~~~l~ 103 (120)
T 1tmy_A 92 EAIKAGAKDFIV 103 (120)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHhCcceeEe
Confidence 999999998653
No 303
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=93.14 E-value=1 Score=35.11 Aligned_cols=82 Identities=17% Similarity=0.112 Sum_probs=59.2
Q ss_pred HHHh-CCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 105 EAHS-AGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 105 ~~~~-~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
.+.+ .|..++..+.+.+++..... ..+|.|++.-.-. ....+.++..+++... .+|||+-.+-.+.+...
T Consensus 24 ~L~~~~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~------~~~g~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~ 95 (153)
T 3cz5_A 24 LIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLP------GPGGIEATRHIRQWDG--AARILIFTMHQGSAFAL 95 (153)
T ss_dssp HHTTSTTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCS------SSCHHHHHHHHHHHCT--TCCEEEEESCCSHHHHH
T ss_pred HHhhCCCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCC------CCCHHHHHHHHHHhCC--CCeEEEEECCCCHHHHH
Confidence 3444 57777767888888876654 4689999853211 1234677888877643 68999888888889999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++.+||+++..
T Consensus 96 ~~~~~g~~~~l~ 107 (153)
T 3cz5_A 96 KAFEAGASGYVT 107 (153)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHCCCcEEEe
Confidence 999999998764
No 304
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=93.12 E-value=0.65 Score=43.24 Aligned_cols=90 Identities=17% Similarity=0.139 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHHHhh-------cCCcEEEEeecCCCC---HHHHHHHHhcCCcEEEEccCC-------------------
Q 020013 47 APDYLRDLIRKTRSL-------TERPFGVGVVLAFPH---NENIKAILSEKVAVLQVSWGE------------------- 97 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~-------~~~p~gvnl~~~~~~---~~~~~~~~~~~~~~I~~~~g~------------------- 97 (332)
+++.+.++++.+++. ++.|+.|.+-..... .+..+.+.+.|+|.|.++...
T Consensus 197 ~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlS 276 (367)
T 3zwt_A 197 GKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLS 276 (367)
T ss_dssp SHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEE
T ss_pred CHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcC
Confidence 467777888877653 578999987654432 234566778999999876210
Q ss_pred -C-----cHHHHHHHHhC---CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 98 -Y-----SEELVLEAHSA---GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 98 -~-----~~~~i~~~~~~---g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
+ ..++++.+++. .++|+. .+.|.+++.+..+.|+|.|.+
T Consensus 277 G~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~v 326 (367)
T 3zwt_A 277 GKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQL 326 (367)
T ss_dssp EGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred CcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 0 01456666653 577774 478999999999999999987
No 305
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=93.10 E-value=4.1 Score=37.23 Aligned_cols=111 Identities=13% Similarity=0.120 Sum_probs=74.2
Q ss_pred HHHHHHHhcCCcEEEEccCCC-----------c-------HHHHHHHHhCCCEEEEecCC--------HH----HHHHHH
Q 020013 78 ENIKAILSEKVAVLQVSWGEY-----------S-------EELVLEAHSAGVKVVPQVGS--------FD----EARKAV 127 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~-----------~-------~~~i~~~~~~g~~v~~~v~s--------~~----~a~~a~ 127 (332)
..++.+.+.+++.|.+..... . .+.++.+++.|.++...+.+ ++ .++.+.
T Consensus 100 ~~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (337)
T 3ble_A 100 KTVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLS 179 (337)
T ss_dssp HHHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHH
T ss_pred hhHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHH
Confidence 368888999999987653211 1 13345567889988766544 33 345677
Q ss_pred HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee----cCcCCHHHHHHHHHcCcceeee
Q 020013 128 NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA----GGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 128 ~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa----GGI~~~~~v~~al~~GA~gV~~ 194 (332)
+.|+|.|.+--. -|.. .+.....++..+++.++ ++|+-.- -|.+ -.+..+++.+||+.|..
T Consensus 180 ~~Ga~~i~l~DT--~G~~-~P~~v~~lv~~l~~~~p--~~~i~~H~Hnd~GlA-~AN~laAv~aGa~~vd~ 244 (337)
T 3ble_A 180 KEHIERIFLPDT--LGVL-SPEETFQGVDSLIQKYP--DIHFEFHGHNDYDLS-VANSLQAIRAGVKGLHA 244 (337)
T ss_dssp TSCCSEEEEECT--TCCC-CHHHHHHHHHHHHHHCT--TSCEEEECBCTTSCH-HHHHHHHHHTTCSEEEE
T ss_pred HcCCCEEEEecC--CCCc-CHHHHHHHHHHHHHhcC--CCeEEEEecCCcchH-HHHHHHHHHhCCCEEEE
Confidence 899999988433 2221 23345677888887764 5777665 6884 57788889999997763
No 306
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=93.09 E-value=0.32 Score=43.10 Aligned_cols=119 Identities=18% Similarity=0.220 Sum_probs=70.1
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHH----HHHHHhCCCEEEEecCCHHHHHH--------------HH-HcC--
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEEL----VLEAHSAGVKVVPQVGSFDEARK--------------AV-NAG-- 130 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~----i~~~~~~g~~v~~~v~s~~~a~~--------------a~-~~g-- 130 (332)
....+.+.|++++.++ ||. ..++ ++.+.+.|+.++..++...+-+. .+ ...
T Consensus 86 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~ 164 (261)
T 1m6j_A 86 HVGMLVDCQVPYVILGHSERRQIFHE-SNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKE 164 (261)
T ss_dssp BHHHHHHTTCCEEEESCHHHHHHSCC-CHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHSCTG
T ss_pred CHHHHHHcCCCEEEECchhhhcccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHH
Confidence 4667888999999985 454 3332 33455679998888874322221 11 111
Q ss_pred --CCEEEE-ecCCCCcccCCCCch-------hhhHHHHHH-HhC---CCCCcEEeecCcCCHHHHHHHHH-cCcceeeec
Q 020013 131 --VDAIIV-QGREAGGHVIGQDGL-------ISLLPMVVD-LIG---DRDIPIIAAGGIVDARGYVAALS-LGAQGICLG 195 (332)
Q Consensus 131 --~D~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~-~~~---~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~G 195 (332)
...|++ +..-+=|. |...+ ...+++... .+. ..+++|+..|+| +++|+.+.+. .+.||+.+|
T Consensus 165 ~~~~~vIAYEPvWAIGT--G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVG 241 (261)
T 1m6j_A 165 AWKNIILAYEPVWAIGT--GKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSV-NPANCNELAKKADIDGFLVG 241 (261)
T ss_dssp GGGGEEEEECCGGGSSS--SCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCC-CTTTHHHHHTSTTCCEEEES
T ss_pred HcCCEEEEECCHHHhCC--CCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCc-CHhhHHHHhcCCCCCeeEec
Confidence 134454 44444443 22222 222332211 110 014899999999 8899988886 689999999
Q ss_pred cccccC
Q 020013 196 TRFVAS 201 (332)
Q Consensus 196 T~fl~t 201 (332)
++-+..
T Consensus 242 gAsL~a 247 (261)
T 1m6j_A 242 GASLDA 247 (261)
T ss_dssp GGGGSH
T ss_pred HHHhCh
Confidence 997754
No 307
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=93.09 E-value=1.1 Score=39.96 Aligned_cols=122 Identities=14% Similarity=0.081 Sum_probs=79.4
Q ss_pred CccceecCCCCCC-----CCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHH
Q 020013 9 FEYGIVQAPLGPD-----ISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAI 83 (332)
Q Consensus 9 ~~~Pii~apM~~g-----~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~ 83 (332)
.+.||+ -|+.. .....++..+.++|.=|+|.. . .++|+..+..+.+++. +. --+-++.+....+.++.+
T Consensus 96 ~~~Piv--lm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip-D-lp~ee~~~~~~~~~~~-gl-~~I~lvap~t~~eri~~i 169 (271)
T 3nav_A 96 PETPIG--LLMYANLVYARGIDDFYQRCQKAGVDSVLIA-D-VPTNESQPFVAAAEKF-GI-QPIFIAPPTASDETLRAV 169 (271)
T ss_dssp TTSCEE--EEECHHHHHHTCHHHHHHHHHHHTCCEEEET-T-SCGGGCHHHHHHHHHT-TC-EEEEEECTTCCHHHHHHH
T ss_pred CCCCEE--EEecCcHHHHHhHHHHHHHHHHCCCCEEEEC-C-CCHHHHHHHHHHHHHc-CC-eEEEEECCCCCHHHHHHH
Confidence 456887 35311 123568999999999998865 3 4667666666666653 22 123344444446778888
Q ss_pred HhcCCcEEEE-c-c---CC---Cc---HHHHHHHHhC-CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 84 LSEKVAVLQV-S-W---GE---YS---EELVLEAHSA-GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 84 ~~~~~~~I~~-~-~---g~---~~---~~~i~~~~~~-g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
.+....+|.+ + . |. .+ .++++++++. .++++. .++++++++.+...|+|++|+
T Consensus 170 ~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIV 236 (271)
T 3nav_A 170 AQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAIS 236 (271)
T ss_dssp HHHCCSCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 7777777764 1 1 21 12 3567777775 566664 467899999899999999999
No 308
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=93.09 E-value=0.58 Score=40.98 Aligned_cols=59 Identities=22% Similarity=0.233 Sum_probs=47.7
Q ss_pred HHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEE-ecCCHHHHHHHHHcCCCEEEEe
Q 020013 79 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVP-QVGSFDEARKAVNAGVDAIIVQ 137 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~-~v~s~~~a~~a~~~g~D~ivv~ 137 (332)
..+.+...+++.+..++....+++++.+++.|++|.+ ++.+.++++.+.+.|+|+|+..
T Consensus 179 ~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~v~~WTvn~~~~~~~l~~~GVdgIiTD 238 (252)
T 3qvq_A 179 WQERLEHLDCAGLHIHQSFFDVQQVSDIKAAGYKVLAFTINDESLALKLYNQGLDAVFSD 238 (252)
T ss_dssp HHHHHHHHTCSEEEEEGGGCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHcCCeEEecchhhCCHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHcCCCEEEeC
Confidence 3445556788888877655567899999999999875 5788999999999999999873
No 309
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=93.08 E-value=2.3 Score=39.06 Aligned_cols=137 Identities=9% Similarity=0.113 Sum_probs=85.6
Q ss_pred HHHHHHHhh-cCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC----CcHHHHHHHHhCCCEEEEec-----CCHHH
Q 020013 53 DLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE----YSEELVLEAHSAGVKVVPQV-----GSFDE 122 (332)
Q Consensus 53 ~~i~~~r~~-~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~----~~~~~i~~~~~~g~~v~~~v-----~s~~~ 122 (332)
+.++++++. .+.++.+=........+.++.+.+.|++.|.+.... ...+.++.+++.|+.+...+ .+++.
T Consensus 71 e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~ 150 (345)
T 1nvm_A 71 EYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEK 150 (345)
T ss_dssp HHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHH
T ss_pred HHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHH
Confidence 345555543 233443211111223678889999999998775321 23467788888899887665 24443
Q ss_pred ----HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeec----CcCCHHHHHHHHHcCcceeee
Q 020013 123 ----ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAG----GIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 123 ----a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaG----GI~~~~~v~~al~~GA~gV~~ 194 (332)
++.+.+.|+|.|.+-+.- |.. .+.....++..+++.++. ++||-.-+ |.+ -.+..+++.+||+-|..
T Consensus 151 ~~~ia~~~~~~Ga~~i~l~DT~--G~~-~P~~v~~lv~~l~~~~~~-~~pi~~H~Hn~~G~a-vAn~laA~~aGa~~vd~ 225 (345)
T 1nvm_A 151 LAEQGKLMESYGATCIYMADSG--GAM-SMNDIRDRMRAFKAVLKP-ETQVGMHAHHNLSLG-VANSIVAVEEGCDRVDA 225 (345)
T ss_dssp HHHHHHHHHHHTCSEEEEECTT--CCC-CHHHHHHHHHHHHHHSCT-TSEEEEECBCTTSCH-HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCc--Ccc-CHHHHHHHHHHHHHhcCC-CceEEEEECCCccHH-HHHHHHHHHcCCCEEEe
Confidence 445677899999886552 222 233446677787777631 57877633 774 47788889999987653
No 310
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=93.06 E-value=1.5 Score=33.49 Aligned_cols=86 Identities=12% Similarity=0.008 Sum_probs=60.5
Q ss_pred HHHHHh-CCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHH
Q 020013 103 VLEAHS-AGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG 180 (332)
Q Consensus 103 i~~~~~-~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~ 180 (332)
.+.+.. .|..++..+.+.+++.... +..+|.|++.-.-. ....+.++..+++.....++|||+-.+-.+.+.
T Consensus 25 ~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~------~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~ 98 (143)
T 3cnb_A 25 TQFLENLFPYAKIKIAYNPFDAGDLLHTVKPDVVMLDLMMV------GMDGFSICHRIKSTPATANIIVIAMTGALTDDN 98 (143)
T ss_dssp HHHHHHHCTTCEEEEECSHHHHHHHHHHTCCSEEEEETTCT------TSCHHHHHHHHHTSTTTTTSEEEEEESSCCHHH
T ss_pred HHHHHhccCccEEEEECCHHHHHHHHHhcCCCEEEEecccC------CCcHHHHHHHHHhCccccCCcEEEEeCCCCHHH
Confidence 344556 7888677788888877654 45699999854321 123467788877621112689998888888888
Q ss_pred HHHHHHcCcceeee
Q 020013 181 YVAALSLGAQGICL 194 (332)
Q Consensus 181 v~~al~~GA~gV~~ 194 (332)
..+++.+|++++..
T Consensus 99 ~~~~~~~g~~~~l~ 112 (143)
T 3cnb_A 99 VSRIVALGAETCFG 112 (143)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHhcCCcEEEe
Confidence 99999999998764
No 311
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=93.05 E-value=0.41 Score=43.37 Aligned_cols=79 Identities=28% Similarity=0.395 Sum_probs=49.4
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~ 197 (332)
.++...+.|+|+|++-|..+-++......-..++..+++...+ ++|||+.=|=.+-++.. .+-.+|||++++-+.
T Consensus 42 lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 42 VAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGD-RAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTT-TSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3445667899999997764444331222235566666666643 68987544432444433 334589999999998
Q ss_pred cccC
Q 020013 198 FVAS 201 (332)
Q Consensus 198 fl~t 201 (332)
+...
T Consensus 121 ~y~~ 124 (304)
T 3cpr_A 121 YYSK 124 (304)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8754
No 312
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=93.02 E-value=0.99 Score=41.73 Aligned_cols=81 Identities=21% Similarity=0.229 Sum_probs=59.2
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc--cC-----CC-cHHHHHHHHh---CCCEEEEe--cCC
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS--WG-----EY-SEELVLEAHS---AGVKVVPQ--VGS 119 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~--~g-----~~-~~~~i~~~~~---~g~~v~~~--v~s 119 (332)
+.++.+++.++.|+.+..... .+..+.+.+.|+|+|.++ .| .+ ..+.+..+.+ ..++|+.. +.+
T Consensus 207 ~~i~~lr~~~~~PvivK~v~~---~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~ 283 (352)
T 3sgz_A 207 NDLSLLQSITRLPIILKGILT---KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRT 283 (352)
T ss_dssp HHHHHHHHHCCSCEEEEEECS---HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCS
T ss_pred HHHHHHHHhcCCCEEEEecCc---HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 457888888889998876642 566788899999999883 22 12 2244444432 25888854 779
Q ss_pred HHHHHHHHHcCCCEEEE
Q 020013 120 FDEARKAVNAGVDAIIV 136 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv 136 (332)
.+++.+++..|+|+|.+
T Consensus 284 g~Dv~kaLalGA~aV~i 300 (352)
T 3sgz_A 284 GTDVLKALALGARCIFL 300 (352)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 99999999999999988
No 313
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=92.99 E-value=0.31 Score=43.86 Aligned_cols=122 Identities=20% Similarity=0.297 Sum_probs=66.0
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~ 197 (332)
.++...+.|+|+|++-|..+-++......-..++..+++...+ ++|||+.=|=.+-++.. .+-.+|||++++-+.
T Consensus 28 lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 28 HVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDK-RVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC-CCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 3445678899999996654333321111224566666666643 69998765533445543 344589999999998
Q ss_pred cccCc-cCCCCHHHHHHHhcCCCceEEEEecccCCCCCCceeecChHHHhhhc
Q 020013 198 FVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWKN 249 (332)
Q Consensus 198 fl~t~-Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~ 249 (332)
+.... +...-+.| +.|.++.+.- ..+++ .|++.+.-+....+.++.+
T Consensus 107 ~y~~~~~~~l~~~f-~~ia~a~~lP-iilYn---~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 107 YYNKTNQRGLVKHF-EAIADAVKLP-VVLYN---VPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp CSSCCCHHHHHHHH-HHHHHHHCSC-EEEEE---CHHHHSCCCCHHHHHHHHT
T ss_pred CCCCCCHHHHHHHH-HHHHHhCCCC-EEEEe---cccccCCCCCHHHHHHHhc
Confidence 76542 11111222 2333333332 22443 2344444555555555443
No 314
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=92.89 E-value=0.78 Score=43.09 Aligned_cols=81 Identities=22% Similarity=0.230 Sum_probs=57.2
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc--cC------CCcHHHHHHHHhC---CCEEEE--ecCC
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS--WG------EYSEELVLEAHSA---GVKVVP--QVGS 119 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~--~g------~~~~~~i~~~~~~---g~~v~~--~v~s 119 (332)
+.++.+++.++.|+.+..+. ..+..+.+.+.|+|+|.++ .| .+..+.+..+++. .++|+. .+.+
T Consensus 242 ~~i~~lr~~~~~PvivKgv~---~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~ 318 (392)
T 2nzl_A 242 EDIKWLRRLTSLPIVAKGIL---RGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRK 318 (392)
T ss_dssp HHHHHHC--CCSCEEEEEEC---CHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCS
T ss_pred HHHHHHHHhhCCCEEEEecC---CHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCC
Confidence 44777887788899886543 2566788899999999984 22 1222444444432 588885 4779
Q ss_pred HHHHHHHHHcCCCEEEE
Q 020013 120 FDEARKAVNAGVDAIIV 136 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv 136 (332)
.+++.+++..|||+|.+
T Consensus 319 g~Dv~kalalGAd~V~i 335 (392)
T 2nzl_A 319 GTDVLKALALGAKAVFV 335 (392)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCCeeEE
Confidence 99999999999999988
No 315
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=92.85 E-value=0.19 Score=45.77 Aligned_cols=119 Identities=16% Similarity=0.207 Sum_probs=65.9
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-cCcCCHHHHH---HHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-GGIVDARGYV---AALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-GGI~~~~~v~---~al~~GA~gV~~GT~f 198 (332)
++...+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+. |+.++.+.+. .+-++|||++.+-+.+
T Consensus 35 v~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Py 113 (309)
T 3fkr_A 35 VDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAG-RVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPY 113 (309)
T ss_dssp HHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCC-CCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 445678899999997664333321112234566666666643 6999975 5565444432 3445899999999987
Q ss_pred cc----CccCCCCHHHHHHHhcCCCceEEEEecccCCCCCCceeecChHHHhhh
Q 020013 199 VA----SEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 248 (332)
Q Consensus 199 l~----t~Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 248 (332)
.. ..+...-+-|+ .|.++.+.- ..+++. |+ .+.-+....+.++.
T Consensus 114 y~~~~~~s~~~l~~~f~-~va~a~~lP-iilYn~---P~-tg~~l~~~~~~~La 161 (309)
T 3fkr_A 114 HGATFRVPEAQIFEFYA-RVSDAIAIP-IMVQDA---PA-SGTALSAPFLARMA 161 (309)
T ss_dssp BTTTBCCCHHHHHHHHH-HHHHHCSSC-EEEEEC---GG-GCCCCCHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHH-HHHHhcCCC-EEEEeC---CC-CCCCCCHHHHHHHH
Confidence 62 22222333333 344444433 234542 33 33445555555543
No 316
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=92.85 E-value=0.4 Score=43.20 Aligned_cols=79 Identities=22% Similarity=0.250 Sum_probs=49.6
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~ 197 (332)
.++...+.|+|+|++-|..+-++......-..++..+++...+ ++|||+.=|=.+-+++. .+-++|||++++-+.
T Consensus 26 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 26 LIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3445678899999997764444332222235566666766643 68987544432434433 344589999999999
Q ss_pred cccC
Q 020013 198 FVAS 201 (332)
Q Consensus 198 fl~t 201 (332)
+...
T Consensus 105 ~y~~ 108 (294)
T 2ehh_A 105 YYNK 108 (294)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8754
No 317
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=92.82 E-value=0.16 Score=45.91 Aligned_cols=79 Identities=13% Similarity=0.221 Sum_probs=48.9
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-cCcCCHHHH---HHHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-GGIVDARGY---VAALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-GGI~~~~~v---~~al~~GA~gV~~GT~ 197 (332)
.+....+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+. |+.++.+.+ ..+-++|||++++-+.
T Consensus 26 lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (297)
T 2rfg_A 26 LVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAG 104 (297)
T ss_dssp HHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3445678899999997664333321212234566666666643 6898754 444443333 2334589999999999
Q ss_pred cccC
Q 020013 198 FVAS 201 (332)
Q Consensus 198 fl~t 201 (332)
+...
T Consensus 105 ~y~~ 108 (297)
T 2rfg_A 105 YYNR 108 (297)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 8754
No 318
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=92.80 E-value=4.5 Score=36.32 Aligned_cols=185 Identities=14% Similarity=0.091 Sum_probs=104.4
Q ss_pred chhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeecC-------CC-----CCCHHHHHHHHHHHHhhcCCcEEEEe
Q 020013 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRA-------PD-----WEAPDYLRDLIRKTRSLTERPFGVGV 70 (332)
Q Consensus 3 ~~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~-------~~-----~~~~e~~~~~i~~~r~~~~~p~gvnl 70 (332)
|.+++.-.-|++ |. +.-++-.+..+.++|.=.+... -+ ..+.+++...++.+...++.|+-+.+
T Consensus 11 lr~l~~~~~~i~---~~-~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~ 86 (295)
T 1s2w_A 11 LKQMLNSKDLEF---IM-EAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDA 86 (295)
T ss_dssp HHHHHHSSSCEE---EE-EECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSCEEEEC
T ss_pred HHHHHhCCCcEE---Ee-cCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecC
Confidence 334444344555 32 4678888888877762111111 01 12445566666666666778866654
Q ss_pred ecCCCC----HHHHHHHHhcCCcEEEEccCC----------------CcHHHHHHHHh-------CCCEEEEecCC----
Q 020013 71 VLAFPH----NENIKAILSEKVAVLQVSWGE----------------YSEELVLEAHS-------AGVKVVPQVGS---- 119 (332)
Q Consensus 71 ~~~~~~----~~~~~~~~~~~~~~I~~~~g~----------------~~~~~i~~~~~-------~g~~v~~~v~s---- 119 (332)
-.-... .+.+..+.+.|+..|.+--+. +..+.+++++. .+..|..-..+
T Consensus 87 d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~ 166 (295)
T 1s2w_A 87 DTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAG 166 (295)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhcc
Confidence 322111 234556678999999873221 12244554432 35667654432
Q ss_pred --HH----HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceee
Q 020013 120 --FD----EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIC 193 (332)
Q Consensus 120 --~~----~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~ 193 (332)
.+ .++...++|+|.|++++ + .++...+.++.+.+.. .+|+++.-+-...-++.+.-++|..-|.
T Consensus 167 ~g~~~ai~Ra~ay~eAGAd~i~~e~----~-----~~~~~~~~~i~~~~~~-~~P~i~~~~~~~~~~~~eL~~lGv~~v~ 236 (295)
T 1s2w_A 167 WGLDEALKRAEAYRNAGADAILMHS----K-----KADPSDIEAFMKAWNN-QGPVVIVPTKYYKTPTDHFRDMGVSMVI 236 (295)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECC----C-----SSSSHHHHHHHHHHTT-CSCEEECCSTTTTSCHHHHHHHTCCEEE
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEcC----C-----CCCHHHHHHHHHHcCC-CCCEEEeCCCCCCCCHHHHHHcCCcEEE
Confidence 23 34567789999999952 1 1224567788887731 3899876331111236677789999999
Q ss_pred eccccccC
Q 020013 194 LGTRFVAS 201 (332)
Q Consensus 194 ~GT~fl~t 201 (332)
.|...+.+
T Consensus 237 ~~~~~~ra 244 (295)
T 1s2w_A 237 WANHNLRA 244 (295)
T ss_dssp ECSHHHHH
T ss_pred EChHHHHH
Confidence 98776543
No 319
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=92.80 E-value=0.21 Score=45.06 Aligned_cols=79 Identities=19% Similarity=0.193 Sum_probs=49.3
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-cCcCCHHHH---HHHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-GGIVDARGY---VAALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-GGI~~~~~v---~~al~~GA~gV~~GT~ 197 (332)
.+....+.|+|+|++-|..+-++......-..++..+++...+ ++|||+. |+.++.+.+ ..+-.+|||++++-+.
T Consensus 29 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 29 HARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIA-PSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCC-GGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3455678899999997764444331222234556666666543 6898754 444333333 2334589999999999
Q ss_pred cccC
Q 020013 198 FVAS 201 (332)
Q Consensus 198 fl~t 201 (332)
+...
T Consensus 108 ~y~~ 111 (294)
T 3b4u_A 108 SYFK 111 (294)
T ss_dssp CSSC
T ss_pred cCCC
Confidence 8765
No 320
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=92.76 E-value=0.71 Score=35.44 Aligned_cols=84 Identities=13% Similarity=0.116 Sum_probs=60.8
Q ss_pred HHHHHh-CCCEEEEecCCHHHHHHHHH--cCCCEEEEecCCCCcccCCCCchhhhHHHHHH--HhCCCCCcEEeecCcCC
Q 020013 103 VLEAHS-AGVKVVPQVGSFDEARKAVN--AGVDAIIVQGREAGGHVIGQDGLISLLPMVVD--LIGDRDIPIIAAGGIVD 177 (332)
Q Consensus 103 i~~~~~-~g~~v~~~v~s~~~a~~a~~--~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~--~~~~~~iPviaaGGI~~ 177 (332)
.+.+++ .|..+. .+.+.+++..... ..+|.|++.-.-.| ....+.++..+++ ... ++|||+-.+-.+
T Consensus 21 ~~~L~~~~~~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~-----~~~g~~~~~~l~~~~~~~--~~~ii~ls~~~~ 92 (140)
T 3lua_A 21 KIIFDNIGEYDFI-EVENLKKFYSIFKDLDSITLIIMDIAFPV-----EKEGLEVLSAIRNNSRTA--NTPVIIATKSDN 92 (140)
T ss_dssp HHHHHHHCCCEEE-EECSHHHHHTTTTTCCCCSEEEECSCSSS-----HHHHHHHHHHHHHSGGGT--TCCEEEEESCCC
T ss_pred HHHHHhccCccEE-EECCHHHHHHHHhcCCCCcEEEEeCCCCC-----CCcHHHHHHHHHhCcccC--CCCEEEEeCCCC
Confidence 344556 788777 7888888876654 46999998532110 1234677888877 433 799999999889
Q ss_pred HHHHHHHHHcCcceeee
Q 020013 178 ARGYVAALSLGAQGICL 194 (332)
Q Consensus 178 ~~~v~~al~~GA~gV~~ 194 (332)
.+.+.+++.+|++++..
T Consensus 93 ~~~~~~~~~~g~~~~l~ 109 (140)
T 3lua_A 93 PGYRHAALKFKVSDYIL 109 (140)
T ss_dssp HHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 99999999999998764
No 321
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=92.74 E-value=0.38 Score=43.29 Aligned_cols=78 Identities=22% Similarity=0.367 Sum_probs=49.8
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~f 198 (332)
++...+.|+|+|++-|..+-++......-..++..+++...+ ++|||+.=|=.+-++.. .+-.+|||++++-+.+
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 106 (291)
T 3tak_A 28 VEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANK-RIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPY 106 (291)
T ss_dssp HHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC-CCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 445668899999997764444332222235566666666643 68988754433444433 3445899999999988
Q ss_pred ccC
Q 020013 199 VAS 201 (332)
Q Consensus 199 l~t 201 (332)
...
T Consensus 107 y~~ 109 (291)
T 3tak_A 107 YNK 109 (291)
T ss_dssp SSC
T ss_pred CCC
Confidence 764
No 322
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=92.72 E-value=1.2 Score=33.61 Aligned_cols=85 Identities=16% Similarity=0.100 Sum_probs=57.3
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHH-c-CCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVN-A-GVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~-~-g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v 181 (332)
+.+++.|...+..+.+..++..... . .+|.|++.-.- .....+.++.++++.....++|||+-.+-.+...+
T Consensus 23 ~~L~~~g~~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~~------p~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~ 96 (129)
T 3h1g_A 23 NTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNM------PEMNGLDLVKKVRSDSRFKEIPIIMITAEGGKAEV 96 (129)
T ss_dssp HHHHHTTCCCEEEESSHHHHHHHHHHCTTCCEEEECSCC------SSSCHHHHHHHHHTSTTCTTCCEEEEESCCSHHHH
T ss_pred HHHHHcCCcEEEEeCCHHHHHHHHHhCCCCCEEEEeCCC------CCCCHHHHHHHHHhcCCCCCCeEEEEeCCCChHHH
Confidence 4455667764556777777765543 3 58988884221 11234677777776322126899998888888899
Q ss_pred HHHHHcCcceeee
Q 020013 182 VAALSLGAQGICL 194 (332)
Q Consensus 182 ~~al~~GA~gV~~ 194 (332)
..++.+||+++..
T Consensus 97 ~~~~~~g~~~~l~ 109 (129)
T 3h1g_A 97 ITALKAGVNNYIV 109 (129)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHHcCccEEEe
Confidence 9999999998764
No 323
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=92.70 E-value=0.42 Score=42.94 Aligned_cols=79 Identities=19% Similarity=0.315 Sum_probs=49.5
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-cCcCCHHHH---HHHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-GGIVDARGY---VAALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-GGI~~~~~v---~~al~~GA~gV~~GT~ 197 (332)
.+....+.|+|+|++-|..+-++......-..++..+++...+ ++|||+. |+.++.+.+ ..+-++|||++++-+.
T Consensus 26 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 26 NINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3445678899999997664444331222235566666666643 6898754 444443333 2334589999999999
Q ss_pred cccC
Q 020013 198 FVAS 201 (332)
Q Consensus 198 fl~t 201 (332)
+...
T Consensus 105 ~y~~ 108 (289)
T 2yxg_A 105 YYNK 108 (289)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8754
No 324
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=92.69 E-value=0.92 Score=42.22 Aligned_cols=81 Identities=19% Similarity=0.130 Sum_probs=59.1
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc--cC------CCcHHHHHHHHhC---CCEEEE--ecCC
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS--WG------EYSEELVLEAHSA---GVKVVP--QVGS 119 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~--~g------~~~~~~i~~~~~~---g~~v~~--~v~s 119 (332)
+.++.+++.++.|+.+..+. ..+..+.+.+.|+|+|.++ .| .+..+.+..+++. .++|+. .+.+
T Consensus 219 ~~i~~lr~~~~~PvivK~v~---~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~ 295 (368)
T 2nli_A 219 RDIEEIAGHSGLPVFVKGIQ---HPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRR 295 (368)
T ss_dssp HHHHHHHHHSSSCEEEEEEC---SHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCS
T ss_pred HHHHHHHHHcCCCEEEEcCC---CHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 44788888788899886442 2566788899999999984 22 1223445555432 578885 4779
Q ss_pred HHHHHHHHHcCCCEEEE
Q 020013 120 FDEARKAVNAGVDAIIV 136 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv 136 (332)
.+++.+++..|+|+|.+
T Consensus 296 g~D~~kalalGAd~V~i 312 (368)
T 2nli_A 296 GEHVAKALASGADVVAL 312 (368)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 99999999999999988
No 325
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=92.68 E-value=0.42 Score=42.52 Aligned_cols=76 Identities=18% Similarity=0.192 Sum_probs=61.5
Q ss_pred EEEEecCCHHHHHHHHHcCCCEEEEe-c-----CCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHH
Q 020013 112 KVVPQVGSFDEARKAVNAGVDAIIVQ-G-----REAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL 185 (332)
Q Consensus 112 ~v~~~v~s~~~a~~a~~~g~D~ivv~-G-----~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al 185 (332)
-|+..|.++++|+.++++|+.+|.+- + ...||.. ..+....+.++++.+ ++||++===|+.-..+...-
T Consensus 13 ~vimdv~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~--Rm~dp~~I~~I~~aV---sIPVm~k~righ~~EAqile 87 (291)
T 3o07_A 13 GVIMDVVTPEQAKIAEKSGACAVMALESIPADMRKSGKVC--RMSDPKMIKDIMNSV---SIPVMAKVRIGHFVEAQIIE 87 (291)
T ss_dssp CEEEEESSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCC--CCCCHHHHHHHHTTC---SSCEEEEEETTCHHHHHHHH
T ss_pred CeeeecCCHHHHHHHHHhCchhhhhccCCCchhhhcCCcc--ccCCHHHHHHHHHhC---CCCeEEEEecCcHHHHHHHH
Confidence 37788999999999999999999873 3 2446542 345678899999988 89999988888877887788
Q ss_pred HcCccee
Q 020013 186 SLGAQGI 192 (332)
Q Consensus 186 ~~GA~gV 192 (332)
++|+|-|
T Consensus 88 a~GaD~I 94 (291)
T 3o07_A 88 ALEVDYI 94 (291)
T ss_dssp HTTCSEE
T ss_pred HcCCCEE
Confidence 8999977
No 326
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=92.61 E-value=1.2 Score=33.48 Aligned_cols=83 Identities=17% Similarity=0.113 Sum_probs=57.7
Q ss_pred HHHHHhCCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH
Q 020013 103 VLEAHSAGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 103 i~~~~~~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v 181 (332)
.+.+++.|..+.. +.+.+++....+ ..+|.|++.-.-.+ ...+.++..+++..+ ++|+|+-.+-.+.+.+
T Consensus 24 ~~~L~~~g~~v~~-~~~~~~a~~~l~~~~~dlvi~d~~l~~------~~g~~~~~~l~~~~~--~~~ii~~t~~~~~~~~ 94 (130)
T 3eod_A 24 DSWFSSLGATTVL-AADGVDALELLGGFTPDLMICDIAMPR------MNGLKLLEHIRNRGD--QTPVLVISATENMADI 94 (130)
T ss_dssp HHHHHHTTCEEEE-ESCHHHHHHHHTTCCCSEEEECCC-----------CHHHHHHHHHTTC--CCCEEEEECCCCHHHH
T ss_pred HHHHHhCCceEEE-eCCHHHHHHHHhcCCCCEEEEecCCCC------CCHHHHHHHHHhcCC--CCCEEEEEcCCCHHHH
Confidence 3445667877654 778888876654 46999998432111 123667777776543 6899988888899999
Q ss_pred HHHHHcCcceeee
Q 020013 182 VAALSLGAQGICL 194 (332)
Q Consensus 182 ~~al~~GA~gV~~ 194 (332)
.+++..||+++..
T Consensus 95 ~~~~~~g~~~~l~ 107 (130)
T 3eod_A 95 AKALRLGVEDVLL 107 (130)
T ss_dssp HHHHHHCCSEEEE
T ss_pred HHHHHcCCCEEEe
Confidence 9999999998753
No 327
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=92.57 E-value=0.44 Score=43.12 Aligned_cols=78 Identities=21% Similarity=0.275 Sum_probs=48.9
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-cCcCCHHHH---HHHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-GGIVDARGY---VAALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-GGI~~~~~v---~~al~~GA~gV~~GT~f 198 (332)
+....+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+. |+.++.+.+ ..+-++|||++++-+.+
T Consensus 38 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (303)
T 2wkj_A 38 VQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG-KIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPF 116 (303)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-TSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCC
Confidence 445668899999997764444321222235566666666643 6898864 444333333 23345899999999998
Q ss_pred ccC
Q 020013 199 VAS 201 (332)
Q Consensus 199 l~t 201 (332)
...
T Consensus 117 y~~ 119 (303)
T 2wkj_A 117 YYP 119 (303)
T ss_dssp SSC
T ss_pred CCC
Confidence 754
No 328
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=92.54 E-value=4.4 Score=36.11 Aligned_cols=137 Identities=16% Similarity=0.145 Sum_probs=79.4
Q ss_pred HHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc-CCCcHHHHHHHHhCCCEEEEecC---CHHHHHHHH--
Q 020013 54 LIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW-GEYSEELVLEAHSAGVKVVPQVG---SFDEARKAV-- 127 (332)
Q Consensus 54 ~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~-g~~~~~~i~~~~~~g~~v~~~v~---s~~~a~~a~-- 127 (332)
+++++++..+.|+..-++- ...++.+.+. +|++.++. +....++.+.+-+.+.+|+.+-+ ++++...+.
T Consensus 77 ~l~~~~~~~Gl~~~te~~d----~~~~~~l~~~-~d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~~ 151 (280)
T 2qkf_A 77 IFEKVKAEFGIPVITDVHE----PHQCQPVAEV-CDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEK 151 (280)
T ss_dssp HHHHHHHHHCCCEEEECCS----GGGHHHHHHH-CSEEEECGGGTTBHHHHHHHHHTCCEEEEECCTTSCGGGHHHHHHH
T ss_pred HHHHHHHHcCCcEEEecCC----HHHHHHHHhh-CCEEEECcccccCHHHHHHHHcCCCcEEEECCCCCCHHHHHHHHHH
Confidence 3444544456776665443 4567777777 99999964 33344678888778999987644 566655543
Q ss_pred --HcCC-CEEEEe-cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-----------cCcCCH------HHHHHHHH
Q 020013 128 --NAGV-DAIIVQ-GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-----------GGIVDA------RGYVAALS 186 (332)
Q Consensus 128 --~~g~-D~ivv~-G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-----------GGI~~~------~~v~~al~ 186 (332)
..|. +.++++ |... +.. .....+..++.+++... ++||+.. ||-+.+ .-..++.+
T Consensus 152 i~~~Gn~~i~L~~rg~~~-~~~-~~~~dl~~i~~lk~~~~--~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava 227 (280)
T 2qkf_A 152 FHEAGNGKLILCERGSSF-GYD-NLVVDMLGFGVMKQTCG--NLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMA 227 (280)
T ss_dssp HHHTTCCCEEEEECCEEC-STT-CEECCTTHHHHHHHHTT--TCCEEEEHHHHCC----------CHHHHHHHHHHHHHT
T ss_pred HHHcCCCeEEEEECCCCC-CCC-ccccCHHHHHHHHHhCC--CCCEEEECCCCccccCccccccCCchhhHHHHHHHHHH
Confidence 4574 666663 3211 110 00124556777776642 5899984 222222 22446678
Q ss_pred cCcceeeeccccc
Q 020013 187 LGAQGICLGTRFV 199 (332)
Q Consensus 187 ~GA~gV~~GT~fl 199 (332)
+||+|+++=+-|-
T Consensus 228 ~Ga~G~~IE~H~~ 240 (280)
T 2qkf_A 228 TRLAGLFLESHPD 240 (280)
T ss_dssp TCCSEEEEEC---
T ss_pred cCCCEEEEeecCC
Confidence 9999999966653
No 329
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=92.54 E-value=0.79 Score=41.14 Aligned_cols=134 Identities=17% Similarity=0.201 Sum_probs=78.8
Q ss_pred HHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC-CcHHHHHHHHhCCCEEEEecC---CHHHHHHH---
Q 020013 54 LIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE-YSEELVLEAHSAGVKVVPQVG---SFDEARKA--- 126 (332)
Q Consensus 54 ~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~-~~~~~i~~~~~~g~~v~~~v~---s~~~a~~a--- 126 (332)
+++++++..+.|+..-++ +...++.+.+. +|++++.... ...++++.+-+.+.+|+.+-+ +++|.+.+
T Consensus 79 ~L~~~~~e~Glp~~tev~----d~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~~a~~gkPVilK~G~~~t~~e~~~ave~ 153 (288)
T 3tml_A 79 ILSEVKRQLGLPVLTDVH----SIDEIEQVASV-VDVLQTPAFLCRQTDFIHACARSGKPVNIKKGQFLAPHDMKNVIDK 153 (288)
T ss_dssp HHHHHHHHHCCCEEEECC----SGGGHHHHHHH-CSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCTTHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEeC----CHHHHHHHHHh-CCEEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 344444445667665544 25667777777 9999997432 334577777778899886643 55555443
Q ss_pred -HHcCC-------CEEEEe-cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee---------------cCcCC--HHH
Q 020013 127 -VNAGV-------DAIIVQ-GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA---------------GGIVD--ARG 180 (332)
Q Consensus 127 -~~~g~-------D~ivv~-G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa---------------GGI~~--~~~ 180 (332)
.+.|. +.++++ |... +.. .....+..++.+++ . ++||+.. ||-.. ..-
T Consensus 154 i~~~Gn~~~~~~~~i~L~erg~~y-~~~-~~~vdl~~i~~lk~-~---~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~ 227 (288)
T 3tml_A 154 ARDAAREAGLSEDRFMACERGVSF-GYN-NLVSDMRSLAIMRE-T---NAPVVFDATHSVQLPGGQGTSSGGQREFVPVL 227 (288)
T ss_dssp HHHHHHTTTCCSCCEEEEECCEEC-SSS-CEECCHHHHHHGGG-G---SSCEEEEHHHHTCCCC--------CTTHHHHH
T ss_pred HHHcCCCccCCCCcEEEEeCCCCC-CCC-cCcCCHHHHHHHHh-c---CCcEEEcCCcccccCCcccCCCCCchhhHHHH
Confidence 33454 466553 3322 111 11124666777766 5 7999883 34211 123
Q ss_pred HHHHHHcCcceeeecccc
Q 020013 181 YVAALSLGAQGICLGTRF 198 (332)
Q Consensus 181 v~~al~~GA~gV~~GT~f 198 (332)
..++.++||||+++=+.|
T Consensus 228 a~AAvA~GadGl~iE~H~ 245 (288)
T 3tml_A 228 ARAAVATGVAGLFMETHP 245 (288)
T ss_dssp HHHHHHHCCSEEEEEEES
T ss_pred HHHHHHcCCCEEEEeecc
Confidence 467889999999985443
No 330
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=92.53 E-value=0.43 Score=42.93 Aligned_cols=79 Identities=23% Similarity=0.332 Sum_probs=49.6
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~ 197 (332)
.++...+.|+|+|++-|..+-++......-..++..+++...+ ++|||+.=|=.+-++.. .+-++|||++++-+.
T Consensus 27 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 27 LIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK-RIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3455678899999997664433321222235566666666643 68987544433444433 334589999999999
Q ss_pred cccC
Q 020013 198 FVAS 201 (332)
Q Consensus 198 fl~t 201 (332)
+...
T Consensus 106 ~y~~ 109 (291)
T 3a5f_A 106 YYNK 109 (291)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8754
No 331
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=92.52 E-value=1.3 Score=39.32 Aligned_cols=89 Identities=19% Similarity=0.106 Sum_probs=57.4
Q ss_pred HHHHHhC-CCEEEEecCCHHHHHHHHHcCCCEEEEecCCCC----cccCC-CCch---hhhHHHHHHHhCCCCCcEEee-
Q 020013 103 VLEAHSA-GVKVVPQVGSFDEARKAVNAGVDAIIVQGREAG----GHVIG-QDGL---ISLLPMVVDLIGDRDIPIIAA- 172 (332)
Q Consensus 103 i~~~~~~-g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaG----Gh~~~-~~~~---~~ll~~i~~~~~~~~iPviaa- 172 (332)
++.+++. ...+++.+.+.-.|+.+.++|+|+|.+ |...| |+.+. ..+. +...+.+++..+ +.||++.
T Consensus 21 lr~~~~~g~~i~m~tayDa~sA~l~e~aG~d~ilv-GdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~--~~~vvaD~ 97 (275)
T 3vav_A 21 LQAMREAGEKIAMLTCYDASFAALLDRANVDVQLI-GDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQP--RALIVADL 97 (275)
T ss_dssp HHHHHHHTCCEEEEECCSHHHHHHHHHTTCSEEEE-CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCC--SSEEEEEC
T ss_pred HHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEE-CcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCC--CCCEEEec
Confidence 4444544 466778999999999999999999955 43222 34321 1222 223444555442 4789987
Q ss_pred --cCcCCHHHH----HHHHHcCcceeee
Q 020013 173 --GGIVDARGY----VAALSLGAQGICL 194 (332)
Q Consensus 173 --GGI~~~~~v----~~al~~GA~gV~~ 194 (332)
||-.+++++ .++++.||++|-+
T Consensus 98 pfgsY~s~~~a~~~a~rl~kaGa~aVkl 125 (275)
T 3vav_A 98 PFGTYGTPADAFASAVKLMRAGAQMVKF 125 (275)
T ss_dssp CTTSCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 445577765 4677789999987
No 332
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=92.52 E-value=0.58 Score=41.23 Aligned_cols=118 Identities=18% Similarity=0.243 Sum_probs=70.3
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHH----HHHHHhCCCEEEEecCC-HHHH-------------HHHHHc-C--
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEEL----VLEAHSAGVKVVPQVGS-FDEA-------------RKAVNA-G-- 130 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~----i~~~~~~g~~v~~~v~s-~~~a-------------~~a~~~-g-- 130 (332)
..+.+.+.|+++|.++ |+. ..+. ++.+.+.|+.++..++. .++- +..++. .
T Consensus 81 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~ 159 (255)
T 3qst_A 81 TVPMIKSFGIEWTILGHSERRDILKE-DDEFLAAKAKFALENGMKIIYCCGEHLSEREAGKASEFVSAQIEKMIPAIPAG 159 (255)
T ss_dssp CHHHHHTTTCCEEEESCHHHHHTSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHGGGSCTT
T ss_pred CHHHHHHcCCCEEEECchhhhhhcCC-CHHHHHHHHHHHHHCCCeEEEEcCCcHHHHHcCCHHHHHHHHHHHHHccCCHH
Confidence 4667888999999985 454 3444 45566789998888873 3321 112211 1
Q ss_pred --CCEEEE-ecCCCCcccCCCCch-------hhhHHHHHHH-hC---CCCCcEEeecCcCCHHHHHHHHH-cCcceeeec
Q 020013 131 --VDAIIV-QGREAGGHVIGQDGL-------ISLLPMVVDL-IG---DRDIPIIAAGGIVDARGYVAALS-LGAQGICLG 195 (332)
Q Consensus 131 --~D~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~~-~~---~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~G 195 (332)
...+|+ +..-+-|. |...+ ...|++.... +. ..+++|+..|+| +++|+.+.+. .+.||+.+|
T Consensus 160 ~~~~~vIAYEPvWAIGT--G~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVG 236 (255)
T 3qst_A 160 KWDDVVIAYEPIWAIGT--GKVASTQDAQEMCKVIRDILAAKVGADIANKVRILYGGSV-KPNNCNELAACPDVDGFLVG 236 (255)
T ss_dssp CGGGEEEEECCGGGSSS--SCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCC-CTTTHHHHHHSTTCCEEEEC
T ss_pred HhCCEEEEECCHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCc-CHhHHHHHhcCCCCCEEEee
Confidence 124444 44344443 21121 2233332111 10 015899999999 8899988886 689999999
Q ss_pred ccccc
Q 020013 196 TRFVA 200 (332)
Q Consensus 196 T~fl~ 200 (332)
++-|.
T Consensus 237 gASL~ 241 (255)
T 3qst_A 237 GASLE 241 (255)
T ss_dssp GGGGS
T ss_pred HHHhh
Confidence 98775
No 333
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=92.49 E-value=0.98 Score=34.63 Aligned_cols=80 Identities=16% Similarity=0.193 Sum_probs=58.2
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.+...|..+. .+.+.+++..... ..+|.|++.- -.+ ...+.++..+++... ++|||+-.+-.+.+.+.
T Consensus 22 ~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~-~~~------~~g~~~~~~l~~~~~--~~pii~ls~~~~~~~~~ 91 (142)
T 2qxy_A 22 NALEKDGFNVI-WAKNEQEAFTFLRREKIDLVFVDV-FEG------EESLNLIRRIREEFP--DTKVAVLSAYVDKDLII 91 (142)
T ss_dssp HHHGGGTCEEE-EESSHHHHHHHHTTSCCSEEEEEC-TTT------HHHHHHHHHHHHHCT--TCEEEEEESCCCHHHHH
T ss_pred HHHHhCCCEEE-EECCHHHHHHHHhccCCCEEEEeC-CCC------CcHHHHHHHHHHHCC--CCCEEEEECCCCHHHHH
Confidence 34555688776 6778888776654 4699999964 211 123667777776543 69999888888888999
Q ss_pred HHHHcCcceee
Q 020013 183 AALSLGAQGIC 193 (332)
Q Consensus 183 ~al~~GA~gV~ 193 (332)
.++..|++++.
T Consensus 92 ~~~~~g~~~~l 102 (142)
T 2qxy_A 92 NSVKAGAVDYI 102 (142)
T ss_dssp HHHHHTCSCEE
T ss_pred HHHHCCcceeE
Confidence 99999999865
No 334
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=92.48 E-value=0.4 Score=43.13 Aligned_cols=79 Identities=23% Similarity=0.297 Sum_probs=49.3
Q ss_pred HHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeecc
Q 020013 122 EARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGT 196 (332)
Q Consensus 122 ~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT 196 (332)
.++...+ .|+|+|++-|..+-++......-..++..+++...+ ++|||+.=|=.+-+++. .+-.+|||++++-+
T Consensus 29 lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 29 IIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD-QIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3445678 899999997664333321222235566666666643 68988544433444443 33458999999999
Q ss_pred ccccC
Q 020013 197 RFVAS 201 (332)
Q Consensus 197 ~fl~t 201 (332)
.+...
T Consensus 108 P~y~~ 112 (293)
T 1f6k_A 108 PFYYK 112 (293)
T ss_dssp CCSSC
T ss_pred CCCCC
Confidence 98754
No 335
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=92.47 E-value=1 Score=36.74 Aligned_cols=82 Identities=26% Similarity=0.208 Sum_probs=59.4
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..+...|..| ..+.+.+++..... ..+|.|+++=.-.+ ...+.++..+++..+ ++|||+-.+-.+.+.+.
T Consensus 25 ~~L~~~g~~v-~~~~~~~~al~~~~~~~~dlvl~D~~lp~------~~g~~~~~~l~~~~~--~~~ii~lt~~~~~~~~~ 95 (184)
T 3rqi_A 25 RGLERRGYAV-RQAHNKDEALKLAGAEKFEFITVXLHLGN------DSGLSLIAPLCDLQP--DARILVLTGYASIATAV 95 (184)
T ss_dssp HHHHHTTCEE-EEECSHHHHHHHHTTSCCSEEEECSEETT------EESHHHHHHHHHHCT--TCEEEEEESSCCHHHHH
T ss_pred HHHHHCCCEE-EEeCCHHHHHHHHhhCCCCEEEEeccCCC------ccHHHHHHHHHhcCC--CCCEEEEeCCCCHHHHH
Confidence 3455677766 56788888877664 46999998422111 123677777776543 68999988888999999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
+++.+||+++..
T Consensus 96 ~a~~~Ga~~~l~ 107 (184)
T 3rqi_A 96 QAVKDGADNYLA 107 (184)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHhCHHHhee
Confidence 999999998774
No 336
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=92.45 E-value=0.31 Score=44.31 Aligned_cols=122 Identities=14% Similarity=0.204 Sum_probs=66.6
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCc-ceeeecc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGA-QGICLGT 196 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA-~gV~~GT 196 (332)
.++...+.|+|+|++-|..+-++......-..++..+++...+ ++|||+.-|=.+-++.. .+-.+|+ |++++-+
T Consensus 33 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g-rvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 33 LIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNG-RVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCS-SSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 3455678999999997764444331212234566666666543 68988754433444443 3345797 9999999
Q ss_pred ccccCc-cCCCCHHHHHHHhcCCCceEEEEecccCCCCCCceeecChHHHhhhc
Q 020013 197 RFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWKN 249 (332)
Q Consensus 197 ~fl~t~-Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~ 249 (332)
.+.... +...-+ |=+.|.++.+.- ..+++ .|++.+.-+....+.++.+
T Consensus 112 P~y~~~s~~~l~~-~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La~ 160 (311)
T 3h5d_A 112 PYYNKPSQEGMYQ-HFKAIADASDLP-IIIYN---IPGRVVVELTPETMLRLAD 160 (311)
T ss_dssp CCSSCCCHHHHHH-HHHHHHHSCSSC-EEEEE---CHHHHSSCCCHHHHHHHHT
T ss_pred CCCCCCCHHHHHH-HHHHHHHhCCCC-EEEEe---cccccCCCCCHHHHHHHhc
Confidence 877542 111112 223344444433 23443 2343444555555555443
No 337
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=92.42 E-value=1.2 Score=41.62 Aligned_cols=108 Identities=16% Similarity=0.179 Sum_probs=74.9
Q ss_pred HHHHHhcCCcEEEEccCCCcH---HHHHHHHhC--CCEEEEecC---CHHHHHH----HHHcCCCEEEEecCCCCcccCC
Q 020013 80 IKAILSEKVAVLQVSWGEYSE---ELVLEAHSA--GVKVVPQVG---SFDEARK----AVNAGVDAIIVQGREAGGHVIG 147 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~~~~---~~i~~~~~~--g~~v~~~v~---s~~~a~~----a~~~g~D~ivv~G~eaGGh~~~ 147 (332)
...+.+.|.+.|.++.|..+. +.++.+++. ++++...++ +.+++.. ..+.|+++| +-+-
T Consensus 155 a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~i--EqP~------- 225 (384)
T 2pgw_A 155 AAVGHAQGERVFYLKVGRGEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFI--EQPT------- 225 (384)
T ss_dssp HHHHHHTTCCEEEEECCSCHHHHHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEE--ECCS-------
T ss_pred HHHHHHcCCCEEEECcCCCHHHHHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEE--eCCC-------
Confidence 344567799999998775333 455566654 477776664 5666543 345688876 2211
Q ss_pred CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeeccccc
Q 020013 148 QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 199 (332)
Q Consensus 148 ~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~GT~fl 199 (332)
+...+..+.++++.+ ++||++.+.+.+.+++.+++..| +|.|++....+
T Consensus 226 ~~~~~~~~~~l~~~~---~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~ 275 (384)
T 2pgw_A 226 VSWSIPAMAHVREKV---GIPIVADQAAFTLYDVYEICRQRAADMICIGPREI 275 (384)
T ss_dssp CTTCHHHHHHHHHHC---SSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred ChhhHHHHHHHHhhC---CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhh
Confidence 113466777888776 79999999999999999999876 79999865544
No 338
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=92.41 E-value=0.41 Score=43.94 Aligned_cols=78 Identities=13% Similarity=0.130 Sum_probs=49.2
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe-ecCcCCHHHH---HHHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA-AGGIVDARGY---VAALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia-aGGI~~~~~v---~~al~~GA~gV~~GT~f 198 (332)
++...+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+ .|+.++.+.+ ..+-.+|||++.+-+.+
T Consensus 61 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 139 (332)
T 2r8w_A 61 IARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG-RRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVS 139 (332)
T ss_dssp HHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 445667899999997764444331222235566666766643 699885 4445443333 23445899999999998
Q ss_pred ccC
Q 020013 199 VAS 201 (332)
Q Consensus 199 l~t 201 (332)
...
T Consensus 140 Y~~ 142 (332)
T 2r8w_A 140 YTP 142 (332)
T ss_dssp SSC
T ss_pred CCC
Confidence 754
No 339
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=92.39 E-value=2 Score=39.49 Aligned_cols=86 Identities=19% Similarity=0.210 Sum_probs=61.7
Q ss_pred HHHHHHHHHhhcCCcEEEEeecCC------CC---HHHHHHHHhcCCcEEEEccCC--------C---cHHHHHHHHh-C
Q 020013 51 LRDLIRKTRSLTERPFGVGVVLAF------PH---NENIKAILSEKVAVLQVSWGE--------Y---SEELVLEAHS-A 109 (332)
Q Consensus 51 ~~~~i~~~r~~~~~p~gvnl~~~~------~~---~~~~~~~~~~~~~~I~~~~g~--------~---~~~~i~~~~~-~ 109 (332)
+.+.++.+|+..+.|++|-+-... +. .+.++.+.+.|+|+|+++.|. . ..++++.+++ .
T Consensus 197 ~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~ 276 (340)
T 3gr7_A 197 LGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA 276 (340)
T ss_dssp HHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc
Confidence 567788888877889998876532 11 234566777899999987431 1 1356666665 4
Q ss_pred CCEEEE--ecCCHHHHHHHHHcC-CCEEEE
Q 020013 110 GVKVVP--QVGSFDEARKAVNAG-VDAIIV 136 (332)
Q Consensus 110 g~~v~~--~v~s~~~a~~a~~~g-~D~ivv 136 (332)
+++|+. .+.+.+++.++++.| +|.|.+
T Consensus 277 ~iPVi~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 277 DIPTGAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp TCCEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred CCcEEeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 677775 467899999999998 999987
No 340
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=92.37 E-value=2 Score=32.54 Aligned_cols=83 Identities=17% Similarity=0.146 Sum_probs=59.3
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.+++.|..+...+.+.+++.... +..+|.|++.-.-.++ ...+.++..+++. . ++|||+-.+-.+.+...
T Consensus 27 ~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~-----~~g~~~~~~l~~~-~--~~~ii~ls~~~~~~~~~ 98 (140)
T 3cg0_A 27 IQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGA-----LDGVETAARLAAG-C--NLPIIFITSSQDVETFQ 98 (140)
T ss_dssp HHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSS-----SCHHHHHHHHHHH-S--CCCEEEEECCCCHHHHH
T ss_pred HHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCC-----CCHHHHHHHHHhC-C--CCCEEEEecCCCHHHHH
Confidence 345556888876688888877654 4569999986332111 1336677777765 3 79999888888888899
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++..|++++..
T Consensus 99 ~~~~~g~~~~l~ 110 (140)
T 3cg0_A 99 RAKRVNPFGYLA 110 (140)
T ss_dssp HHHTTCCSEEEE
T ss_pred HHHhcCCCEEEe
Confidence 999999998764
No 341
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=92.35 E-value=2.4 Score=36.71 Aligned_cols=170 Identities=14% Similarity=0.155 Sum_probs=100.0
Q ss_pred CCcHHHHHHHHh-CCCceeecCCCC----CCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc--
Q 020013 22 ISGPELVAAVAN-AGGLGLLRAPDW----EAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS-- 94 (332)
Q Consensus 22 ~s~~~la~avs~-aGglG~i~~~~~----~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~-- 94 (332)
..+|--++.++. +|+=|+..-.+- ...+ .+..+++....+|++-... .++.++.+++.+|+.|++-
T Consensus 24 ~Pdpv~aA~~ae~aGAdgITvHlReDrRHI~d~----Dv~~L~~~~~~~lNlE~a~---t~emi~ia~~~kP~~vtLVPE 96 (243)
T 1m5w_A 24 YPDPVQAAFIAEQAGADGITVHLREDRRHITDR----DVRILRQTLDTRMNLEMAV---TEEMLAIAVETKPHFCCLVPE 96 (243)
T ss_dssp CSCHHHHHHHHHTTTCSEEEEECCTTCSSSCHH----HHHHHHHHCSSEEEEEECS---SHHHHHHHHHHCCSEEEECCC
T ss_pred CCCHHHHHHHHHHcCCCEEEeCCCCCcccCCHH----HHHHHHHhcCCCEEeccCC---CHHHHHHHHHcCCCEEEECCC
Confidence 356665666665 455555432211 1222 2445555445555544332 3789999999999999863
Q ss_pred --------cCCCc-------HHHHHHHHhCCCEEEEecC-CHHHHHHHHHcCCCEEEEe-cCCCCcccC-CCCchhhhHH
Q 020013 95 --------WGEYS-------EELVLEAHSAGVKVVPQVG-SFDEARKAVNAGVDAIIVQ-GREAGGHVI-GQDGLISLLP 156 (332)
Q Consensus 95 --------~g~~~-------~~~i~~~~~~g~~v~~~v~-s~~~a~~a~~~g~D~ivv~-G~eaGGh~~-~~~~~~~ll~ 156 (332)
.|... .++++++++.|+.|-.-+. +++....+.+.|+|.|=+. |..+--+.. ....-+..+.
T Consensus 97 ~r~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~GA~~IELhTG~Ya~a~~~~~~~~el~~i~ 176 (243)
T 1m5w_A 97 KRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIA 176 (243)
T ss_dssp CSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHTTCSEEEEECHHHHHCCSHHHHHHHHHHHH
T ss_pred CCCCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEEechhhhcCCCchhHHHHHHHHH
Confidence 12221 4678899999999876664 7888889999999999873 321111100 0001122222
Q ss_pred HHHHHhCCCCCcEEeecCcCCHHHHHHHHHc-Ccceeeeccccc
Q 020013 157 MVVDLIGDRDIPIIAAGGIVDARGYVAALSL-GAQGICLGTRFV 199 (332)
Q Consensus 157 ~i~~~~~~~~iPviaaGGI~~~~~v~~al~~-GA~gV~~GT~fl 199 (332)
...+.....++-|=+.-|+ |.+|+....+. +-.-+-+|-+++
T Consensus 177 ~aa~~A~~lGL~VnAGHgL-~y~Nv~~ia~ip~i~ElnIGHaii 219 (243)
T 1m5w_A 177 KAATFAASLGLKVNAGHGL-TYHNVKAIAAIPEMHELNIGHAII 219 (243)
T ss_dssp HHHHHHHHTTCEEEEESSC-CTTTHHHHHTCTTEEEEEECHHHH
T ss_pred HHHHHHHHcCCEEecCCCC-CHHHHHHHhhCCCCeEEccCHHHH
Confidence 2222221236889999999 88998876543 455666665544
No 342
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=92.35 E-value=0.39 Score=43.13 Aligned_cols=80 Identities=20% Similarity=0.198 Sum_probs=57.6
Q ss_pred CEEEEecCCHHHHHHHHHcCCCEEEEec------CCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHH
Q 020013 111 VKVVPQVGSFDEARKAVNAGVDAIIVQG------REAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAA 184 (332)
Q Consensus 111 ~~v~~~v~s~~~a~~a~~~g~D~ivv~G------~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~a 184 (332)
.+++..+...+.++.+.+.|++.|.+.. ...+|-. .......+.++++.. ++|++...++.+.+.+..+
T Consensus 22 ~~~i~~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~--~~~~~~~i~~i~~~~---~~Pvi~~~~~~~~~~~~~~ 96 (297)
T 2zbt_A 22 GGVIMDVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVA--RMSDPKIIKEIMAAV---SIPVMAKVRIGHFVEAMIL 96 (297)
T ss_dssp TEEEEEESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCC--CCCCHHHHHHHHTTC---SSCEEEEEETTCHHHHHHH
T ss_pred CCeeeeechHHHHHHHHHCCCcEEEeccccchHHHhhcCCc--cCCCHHHHHHHHHhc---CCCeEEEeccCCHHHHHHH
Confidence 4567777788888899999999997621 0112211 122356677777655 7999998888888999999
Q ss_pred HHcCcceeeecc
Q 020013 185 LSLGAQGICLGT 196 (332)
Q Consensus 185 l~~GA~gV~~GT 196 (332)
+++|||+| -|+
T Consensus 97 ~~aGad~v-~~~ 107 (297)
T 2zbt_A 97 EAIGVDFI-DES 107 (297)
T ss_dssp HHTTCSEE-EEE
T ss_pred HHCCCCEE-eee
Confidence 99999999 443
No 343
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=92.34 E-value=0.66 Score=35.22 Aligned_cols=98 Identities=11% Similarity=-0.039 Sum_probs=63.2
Q ss_pred HHHHHhCCCEEEEecCCHHHHHHH-HHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH
Q 020013 103 VLEAHSAGVKVVPQVGSFDEARKA-VNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 103 i~~~~~~g~~v~~~v~s~~~a~~a-~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v 181 (332)
.+.+++.|..+...+.+.+++... .+..+|.|++.-.-. ....+.++..+++..+ ++|||.-.+-.+.+..
T Consensus 18 ~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~------~~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~ 89 (134)
T 3f6c_A 18 RNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIP------GVNGIQVLETLRKRQY--SGIIIIVSAKNDHFYG 89 (134)
T ss_dssp HHHHHHTTEEEEEEESSSTTHHHHHHHHCCSEEEEETTCS------SSCHHHHHHHHHHTTC--CSEEEEEECC---CTH
T ss_pred HHHHhhCCcEEEEEcCCHHHHHHHHHhcCCCEEEEecCCC------CCChHHHHHHHHhcCC--CCeEEEEeCCCChHHH
Confidence 344566777776567776666554 456799999853311 1234677888877543 6899988888788889
Q ss_pred HHHHHcCcceeeeccccccCccCCCCHHHHHHHhc
Q 020013 182 VAALSLGAQGICLGTRFVASEESYAHPEYKRKLVE 216 (332)
Q Consensus 182 ~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~~~~ 216 (332)
.+++..|++++..=. -..+...+++..
T Consensus 90 ~~~~~~g~~~~l~kp--------~~~~~l~~~i~~ 116 (134)
T 3f6c_A 90 KHCADAGANGFVSKK--------EGMNNIIAAIEA 116 (134)
T ss_dssp HHHHHTTCSEEEEGG--------GCTHHHHHHHHH
T ss_pred HHHHHhCCCEEEeCC--------CCHHHHHHHHHH
Confidence 999999999876421 123556666654
No 344
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=92.32 E-value=1.2 Score=38.27 Aligned_cols=87 Identities=18% Similarity=0.226 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHHHhhcCCcEEEEeecCCC---C---HHHHHHHHhcCCcEEEEccCC----CcHHHHHHHHhC---CCEE
Q 020013 47 APDYLRDLIRKTRSLTERPFGVGVVLAFP---H---NENIKAILSEKVAVLQVSWGE----YSEELVLEAHSA---GVKV 113 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~~~p~gvnl~~~~~---~---~~~~~~~~~~~~~~I~~~~g~----~~~~~i~~~~~~---g~~v 113 (332)
..+.+.+.++++++... |+.+.+++..+ . .+..+.+.+.|+|+|.++.|. ...+.++.+++. .++|
T Consensus 100 ~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipV 178 (225)
T 1mzh_A 100 KYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKV 178 (225)
T ss_dssp CHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEE
T ss_pred ChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcE
Confidence 45666777888887766 77777754322 1 233566778899999876432 244566666653 5777
Q ss_pred EE--ecCCHHHHHHHHHcCCCEE
Q 020013 114 VP--QVGSFDEARKAVNAGVDAI 134 (332)
Q Consensus 114 ~~--~v~s~~~a~~a~~~g~D~i 134 (332)
+. .+.|.+++.+.+++|+|.|
T Consensus 179 ia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 179 KASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEE
T ss_pred EEECCCCCHHHHHHHHHhCchHH
Confidence 64 4779999999999999965
No 345
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=92.31 E-value=0.61 Score=43.04 Aligned_cols=90 Identities=11% Similarity=0.127 Sum_probs=62.2
Q ss_pred CHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCc---EEE----------Ecc---------------CCC
Q 020013 47 APDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVA---VLQ----------VSW---------------GEY 98 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~---~I~----------~~~---------------g~~ 98 (332)
+++.+.++++.+++.+++|+.|.+-.+....+..+.+.+.+++ +|. ++. |.+
T Consensus 177 ~~e~l~~il~av~~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~a 256 (345)
T 3oix_A 177 DFETTDQILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDY 256 (345)
T ss_dssp CHHHHHHHHHHHTTTCCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGG
T ss_pred CHHHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCcc
Confidence 6788999999999988999999887654334445555555544 332 110 111
Q ss_pred c----HHHHHHHHhC---CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 99 S----EELVLEAHSA---GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 99 ~----~~~i~~~~~~---g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
. .+++.++++. .++|+. .+.|.+++.+.+.+|+|.|-+
T Consensus 257 i~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~i 303 (345)
T 3oix_A 257 VKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQI 303 (345)
T ss_dssp GHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred ccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEE
Confidence 1 2456677664 478875 478999999999999999987
No 346
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=92.31 E-value=0.83 Score=42.51 Aligned_cols=81 Identities=19% Similarity=0.141 Sum_probs=58.9
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc--cCC------CcHHHHHHHHh-C--CCEEEE--ecCC
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS--WGE------YSEELVLEAHS-A--GVKVVP--QVGS 119 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~--~g~------~~~~~i~~~~~-~--g~~v~~--~v~s 119 (332)
+.++++++.++.|+.+.... ..+.++.+.+.|+|+|.++ .|. +..+.+..+++ . .++|+. .+.+
T Consensus 215 ~~i~~l~~~~~~pv~vK~~~---~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~ 291 (370)
T 1gox_A 215 KDVAWLQTITSLPILVKGVI---TAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRR 291 (370)
T ss_dssp HHHHHHHHHCCSCEEEECCC---SHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCS
T ss_pred HHHHHHHHHhCCCEEEEecC---CHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCC
Confidence 45777777778898885543 2567788899999999983 221 22344555544 2 577875 4789
Q ss_pred HHHHHHHHHcCCCEEEE
Q 020013 120 FDEARKAVNAGVDAIIV 136 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv 136 (332)
.+++.+++..|+|+|.+
T Consensus 292 ~~D~~k~l~~GAdaV~i 308 (370)
T 1gox_A 292 GTDVFKALALGAAGVFI 308 (370)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEee
Confidence 99999999999999988
No 347
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=92.29 E-value=5.4 Score=34.85 Aligned_cols=183 Identities=16% Similarity=0.094 Sum_probs=102.9
Q ss_pred hhcCCccceecCCCCCCCCcHHHHHHHHhCCCceeec--CCC-CCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHH
Q 020013 5 GMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLR--APD-WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIK 81 (332)
Q Consensus 5 ~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i~--~~~-~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~ 81 (332)
+.|.-..|.+..-+ .+++|+.+..+..+|. .++. ... ....+..+..+..++. .+.+..|-+ +..+...++
T Consensus 12 ~~l~~g~~~~~~~l--~v~~p~~~e~a~~~ga-D~v~lDlEd~p~~~~~a~~~~~~~~~-~~~~~~VRv--~~~~~~~i~ 85 (256)
T 1dxe_A 12 AALAAKQVQIGCWS--ALSNPISTEVLGLAGF-DWLVLDGEHAPNDISTFIPQLMALKG-SASAPVVRV--PTNEPVIIK 85 (256)
T ss_dssp HHHHTTCCEEEEEE--CSCSHHHHHHHTTSCC-SEEEEESSSSSCCHHHHHHHHHHTTT-CSSEEEEEC--SSSCHHHHH
T ss_pred HHHHCCCCeEEEEE--eCCCHHHHHHHHhCCC-CEEEEcCCCCCCCHHHHHHHHHHHHh-CCCcEEEEC--CCCCHHHHH
Confidence 33333345553322 3678998887777764 3332 221 1234555655555432 334444433 333456688
Q ss_pred HHHhcCCcEEEEccCCCcHHHHHHHH--------------------------------hCCCEEEEecCCHHHHHHHH--
Q 020013 82 AILSEKVAVLQVSWGEYSEELVLEAH--------------------------------SAGVKVVPQVGSFDEARKAV-- 127 (332)
Q Consensus 82 ~~~~~~~~~I~~~~g~~~~~~i~~~~--------------------------------~~g~~v~~~v~s~~~a~~a~-- 127 (332)
.+++.+++.|.++.=..+.+ ++.+. ...++++..+-+++-+..+.
T Consensus 86 ~~l~~g~~gI~~P~V~s~~e-v~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~eI 164 (256)
T 1dxe_A 86 RLLDIGFYNFLIPFVETKEE-AELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAI 164 (256)
T ss_dssp HHHHTTCCEEEESCCCSHHH-HHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHHHH
T ss_pred HHHhcCCceeeecCcCCHHH-HHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHHHH
Confidence 88999999998875332333 22221 12477888888877554432
Q ss_pred -H-cCCCEEEEecC----CCCcccCCC--CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccc
Q 020013 128 -N-AGVDAIIVQGR----EAGGHVIGQ--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTR 197 (332)
Q Consensus 128 -~-~g~D~ivv~G~----eaGGh~~~~--~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~ 197 (332)
. .++|++.+-.. +. |+.+.. ......+.++..+....++|+.... .+++.+..++.+|.+.+.+|+-
T Consensus 165 a~~~~vd~l~iG~~DL~~~l-g~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~--~d~~~~~~~~~~G~~~~s~~~d 239 (256)
T 1dxe_A 165 AATEGVDGIFVGPSDLAAAL-GHLGNASHPDVQKAIQHIFNRASAHGKPSGILA--PVEADARRYLEWGATFVAVGSD 239 (256)
T ss_dssp HTSTTCCEEEECHHHHHHHT-TCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC--CSHHHHHHHHHTTCCEEEEEEH
T ss_pred hCCCCCCEEEEChHHHHHHh-CCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec--CCHHHHHHHHHcCCCEEEechH
Confidence 2 38999988221 11 222111 1234445555444322256664433 3889999999999999999875
No 348
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=92.27 E-value=1.2 Score=40.10 Aligned_cols=89 Identities=19% Similarity=0.133 Sum_probs=58.3
Q ss_pred HHHHHh-CCCEEEEecCCHHHHHHHHHcCCCEEEEecCCC---CcccCCC-Cch---hhhHHHHHHHhCCCCCcEEeec-
Q 020013 103 VLEAHS-AGVKVVPQVGSFDEARKAVNAGVDAIIVQGREA---GGHVIGQ-DGL---ISLLPMVVDLIGDRDIPIIAAG- 173 (332)
Q Consensus 103 i~~~~~-~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~ea---GGh~~~~-~~~---~~ll~~i~~~~~~~~iPviaaG- 173 (332)
++.+++ ....+++.+.+.-.|+.+.++|.|+|.+.|... =|+.+.. .+. ...+..|.+.. ++||++..
T Consensus 7 lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~---~~PviaD~d 83 (290)
T 2hjp_A 7 LRAALDSGRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTV---SIPLIADID 83 (290)
T ss_dssp HHHHHHHCCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTC---SSCEEEECT
T ss_pred HHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC---CCCEEEECC
Confidence 344444 457778899999999999999999999976311 2444322 222 22333444433 79999864
Q ss_pred -CcCCHH----HHHHHHHcCcceeee
Q 020013 174 -GIVDAR----GYVAALSLGAQGICL 194 (332)
Q Consensus 174 -GI~~~~----~v~~al~~GA~gV~~ 194 (332)
|-+++. ++..++++||+||.+
T Consensus 84 ~Gyg~~~~~~~~v~~l~~aGa~gv~i 109 (290)
T 2hjp_A 84 TGFGNAVNVHYVVPQYEAAGASAIVM 109 (290)
T ss_dssp TTTSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEE
Confidence 333554 455677799999988
No 349
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=92.26 E-value=1.5 Score=38.53 Aligned_cols=117 Identities=15% Similarity=0.204 Sum_probs=69.8
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHHH----HHHHhCCCEEEEecCC-HHH-------------HHHHHHcCC--
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEELV----LEAHSAGVKVVPQVGS-FDE-------------ARKAVNAGV-- 131 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~i----~~~~~~g~~v~~~v~s-~~~-------------a~~a~~~g~-- 131 (332)
..+.+.+.|++++.++ |+. ..+.+ +.+.+.|+.++..++. .++ .+... .+.
T Consensus 79 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l-~~~~~ 156 (249)
T 3th6_A 79 SPGMIKDCGGQWVILGHSERRHVFKE-DDVLIGEKIKHALESGLNVIACIGELLEDREAGRTEEVCFRQIKHIA-SNVKD 156 (249)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHTTTCHHHHHHHHHHHHH-TTCSC
T ss_pred CHHHHHHcCCCEEEECchhhccccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHH-hchhh
Confidence 4667888999999985 454 34443 5566789998888873 221 11122 222
Q ss_pred --CEEEE-ecCCCCcccCCCCch-------hhhHHHHHH-HhCC---CCCcEEeecCcCCHHHHHHHHH-cCcceeeecc
Q 020013 132 --DAIIV-QGREAGGHVIGQDGL-------ISLLPMVVD-LIGD---RDIPIIAAGGIVDARGYVAALS-LGAQGICLGT 196 (332)
Q Consensus 132 --D~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~-~~~~---~~iPviaaGGI~~~~~v~~al~-~GA~gV~~GT 196 (332)
..+++ +..-+-|. |...+ ...|+.... .+.. .+++|+..|+| +++|+.+.+. .+.||+.+|+
T Consensus 157 ~~~~vIAYEPvWAIGT--G~~At~e~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGg 233 (249)
T 3th6_A 157 WSKVVIAYEPVWAIGT--GKTATPDQAQEVHSKVRNWLSTNVSADVASKVRIQYGGSV-NAGNCKELGRKPDIDGFLVGG 233 (249)
T ss_dssp GGGEEEEECCTTTCCC-----CCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCC-CTTTHHHHHTSTTCCEEEECG
T ss_pred hcCEEEEECCcchhcC--CCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCcc-CHhHHHHHhcCCCCCEEEeeh
Confidence 23443 55455443 22111 222332211 1100 14899999999 7899988875 6899999999
Q ss_pred cccc
Q 020013 197 RFVA 200 (332)
Q Consensus 197 ~fl~ 200 (332)
+-|.
T Consensus 234 ASL~ 237 (249)
T 3th6_A 234 ASLK 237 (249)
T ss_dssp GGGS
T ss_pred Hhhh
Confidence 8764
No 350
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=92.22 E-value=0.4 Score=43.71 Aligned_cols=121 Identities=10% Similarity=0.168 Sum_probs=65.7
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~f 198 (332)
++...+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+.=|=.+-++.. .+-.+|||++++-+.+
T Consensus 49 i~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~ 127 (315)
T 3si9_A 49 VEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAK-RVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPY 127 (315)
T ss_dssp HHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 445668899999997664433321112234566666666643 68988754433444433 3446899999999988
Q ss_pred ccCc-cCCCCHHHHHHHhcCCCceEEEEecccCCCCCCceeecChHHHhhhc
Q 020013 199 VASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWKN 249 (332)
Q Consensus 199 l~t~-Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~ 249 (332)
.... +...-+ |=+.|.++.+.- ..+++ .|++.+.-+....+.++.+
T Consensus 128 y~~~~~~~l~~-~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 128 YNRPNQRGLYT-HFSSIAKAISIP-IIIYN---IPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp SSCCCHHHHHH-HHHHHHHHCSSC-EEEEE---CHHHHSCCCCHHHHHHHHH
T ss_pred CCCCCHHHHHH-HHHHHHHcCCCC-EEEEe---CchhhCCCCCHHHHHHHHh
Confidence 7542 111112 223344444433 23443 1343344455555555443
No 351
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=92.14 E-value=0.41 Score=43.55 Aligned_cols=89 Identities=16% Similarity=0.232 Sum_probs=64.6
Q ss_pred CHHHHHHHHHHHHhhcCCcEEEEeecCC--CC-HHHHHHHHhcCCcEEEEccCC--------CcHHHHHHHHhCCCEEEE
Q 020013 47 APDYLRDLIRKTRSLTERPFGVGVVLAF--PH-NENIKAILSEKVAVLQVSWGE--------YSEELVLEAHSAGVKVVP 115 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~~~p~gvnl~~~~--~~-~~~~~~~~~~~~~~I~~~~g~--------~~~~~i~~~~~~g~~v~~ 115 (332)
.++.+.+.++.+++..+.|+.+.+-... .+ .+.++.+.+.|++.|.+|.+. ..-++++.+++ +++|+.
T Consensus 110 ~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~-~ipVi~ 188 (318)
T 1vhn_A 110 DLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK-RIPTFV 188 (318)
T ss_dssp CHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC-SSCEEE
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc-CCeEEE
Confidence 5777888899999887788888764311 11 256777888999999997321 11134555556 788875
Q ss_pred e--cCCHHHHHHHHH-cCCCEEEE
Q 020013 116 Q--VGSFDEARKAVN-AGVDAIIV 136 (332)
Q Consensus 116 ~--v~s~~~a~~a~~-~g~D~ivv 136 (332)
. +.|.+++.++++ .|+|+|.+
T Consensus 189 ~GgI~s~~da~~~l~~~gad~V~i 212 (318)
T 1vhn_A 189 SGDIFTPEDAKRALEESGCDGLLV 212 (318)
T ss_dssp ESSCCSHHHHHHHHHHHCCSEEEE
T ss_pred ECCcCCHHHHHHHHHcCCCCEEEE
Confidence 4 779999999988 69999988
No 352
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=92.14 E-value=0.67 Score=40.64 Aligned_cols=118 Identities=14% Similarity=0.210 Sum_probs=70.1
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHH----HHHHHHhCCCEEEEecCCHHHHH--------------HHHH---cC
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEE----LVLEAHSAGVKVVPQVGSFDEAR--------------KAVN---AG 130 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~----~i~~~~~~g~~v~~~v~s~~~a~--------------~a~~---~g 130 (332)
....+.+.|++++.++ |+. ..+ -++.+.+.|+.++..++...+.+ .+++ .-
T Consensus 78 S~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~ 156 (247)
T 1ney_A 78 SVDQIKDVGAKYVILGHSERRSYFHE-DDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDF 156 (247)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTTCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHcCCCEEEECChhhccccCC-CHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhchhhh
Confidence 4567888999999985 454 333 23445678999888887332211 1222 11
Q ss_pred CCEEEE-ecCCCCcccCCCCch-------hhhHHHHHHH-hC---CCCCcEEeecCcCCHHHHHHHHH-cCcceeeeccc
Q 020013 131 VDAIIV-QGREAGGHVIGQDGL-------ISLLPMVVDL-IG---DRDIPIIAAGGIVDARGYVAALS-LGAQGICLGTR 197 (332)
Q Consensus 131 ~D~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~~-~~---~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~GT~ 197 (332)
...|++ +..-+-|. |...+ ...+++.... +. ..+++|+..|+| +++|+.+.+. .+.||+.+|++
T Consensus 157 ~~~vIAYEPvWAIGT--G~~Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgA 233 (247)
T 1ney_A 157 TNVVVAYEPVXAIGT--GLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSA-NGSNAVTFKDKADVDGFLVGGA 233 (247)
T ss_dssp TTEEEEECCGGGTTT--SCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSC-CTTTGGGGTTCTTCCEEEESGG
T ss_pred cCEEEEECChhhcCC--CCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCCc-CHhHHHHHHcCCCCCeeEeehH
Confidence 234444 44444443 22222 2223321111 10 014899999999 7899888775 68999999999
Q ss_pred ccc
Q 020013 198 FVA 200 (332)
Q Consensus 198 fl~ 200 (332)
-+.
T Consensus 234 sL~ 236 (247)
T 1ney_A 234 SLK 236 (247)
T ss_dssp GGS
T ss_pred HHH
Confidence 775
No 353
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=92.08 E-value=0.74 Score=40.88 Aligned_cols=118 Identities=17% Similarity=0.253 Sum_probs=70.3
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHH----HHHHHhCCCEEEEecCC-HHHHH------------HHHHcCC---
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEEL----VLEAHSAGVKVVPQVGS-FDEAR------------KAVNAGV--- 131 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~----i~~~~~~g~~v~~~v~s-~~~a~------------~a~~~g~--- 131 (332)
..+.+.+.|+++|.++ |+. ..+. ++.+.+.|+.++..++. .++-. .+.-.+.
T Consensus 102 S~~mLkd~G~~~ViiGHSERR~~f~E-tde~v~~Kv~~Al~~GL~pIlCVGEtleere~g~t~~vv~~Ql~~~l~~v~~~ 180 (271)
T 3krs_A 102 SCEMLKDMDVDCSLVGHSERRQYYSE-TDQIVNNKVKKGLENGLKIVLCIGESLSERETGKTNDVIQKQLTEALKDVSDL 180 (271)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHHSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCC
T ss_pred cHHHHHHcCCCEEEECchhhccccCC-CHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHCCCHHHHHHHHHHHHHhchHhh
Confidence 4567888999999985 454 3444 44566789998888873 33210 1111121
Q ss_pred -CEEEE-ecCCCCcccCCCCch-------hhhHHHHHHH-hC---CCCCcEEeecCcCCHHHHHHHHH-cCcceeeeccc
Q 020013 132 -DAIIV-QGREAGGHVIGQDGL-------ISLLPMVVDL-IG---DRDIPIIAAGGIVDARGYVAALS-LGAQGICLGTR 197 (332)
Q Consensus 132 -D~ivv-~G~eaGGh~~~~~~~-------~~ll~~i~~~-~~---~~~iPviaaGGI~~~~~v~~al~-~GA~gV~~GT~ 197 (332)
..||+ +..-+=|. |...+ ...|++.... +. ..+++|+..|+| +++|+.+.+. .+.||+.+|++
T Consensus 181 ~~~vIAYEPvWAIGT--G~tAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV-~~~N~~el~~~~diDG~LVGgA 257 (271)
T 3krs_A 181 SNLVIAYEPIWAIGT--GVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSV-TPDNCNELIKCADIDGFLVGGA 257 (271)
T ss_dssp TTEEEEECCGGGSSS--SCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCC-CTTTHHHHHHSTTCCEEEESGG
T ss_pred cCEEEEECChhhhcC--CCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCc-CHHHHHHHhcCCCCCEEEeeHH
Confidence 24444 44444342 22121 2233332211 10 015899999999 8899998886 68999999998
Q ss_pred ccc
Q 020013 198 FVA 200 (332)
Q Consensus 198 fl~ 200 (332)
-|.
T Consensus 258 SL~ 260 (271)
T 3krs_A 258 SLK 260 (271)
T ss_dssp GGS
T ss_pred hhh
Confidence 775
No 354
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=92.03 E-value=0.76 Score=41.46 Aligned_cols=79 Identities=22% Similarity=0.243 Sum_probs=53.0
Q ss_pred EEEecCCHHHHHHHHHcCCCEE-EEe-----cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCC--HHHHHHH
Q 020013 113 VVPQVGSFDEARKAVNAGVDAI-IVQ-----GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD--ARGYVAA 184 (332)
Q Consensus 113 v~~~v~s~~~a~~a~~~g~D~i-vv~-----G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~--~~~v~~a 184 (332)
++..+...+.++.+.+.|+|+| ++. -...+|- ........+.++++.+ ++|++. ++.. .+.+..+
T Consensus 24 ~i~~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~--~~~~~~~~i~~I~~~~---~iPv~~--k~r~g~~~~~~~~ 96 (305)
T 2nv1_A 24 VIMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGV--ARMADPTIVEEVMNAV---SIPVMA--KARIGHIVEARVL 96 (305)
T ss_dssp EEEEESSHHHHHHHHHTTCSEEEECCC-------CCCC--CCCCCHHHHHHHHHHC---SSCEEE--EECTTCHHHHHHH
T ss_pred eeecCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCc--ccCCCHHHHHHHHHhC---CCCEEe--cccccchHHHHHH
Confidence 3347788899999999999999 442 1111221 1223466777887766 799984 4433 6777888
Q ss_pred HHcCcceeeeccccc
Q 020013 185 LSLGAQGICLGTRFV 199 (332)
Q Consensus 185 l~~GA~gV~~GT~fl 199 (332)
+++|||+|. ++..+
T Consensus 97 ~a~GAd~V~-~~~~l 110 (305)
T 2nv1_A 97 EAMGVDYID-ESEVL 110 (305)
T ss_dssp HHHTCSEEE-ECTTS
T ss_pred HHCCCCEEE-EeccC
Confidence 889999997 66554
No 355
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=92.00 E-value=3.3 Score=37.19 Aligned_cols=136 Identities=14% Similarity=0.104 Sum_probs=78.4
Q ss_pred HHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC-CcHHHHHHHHhCCCEEEEecC---CHHHHHHHH--
Q 020013 54 LIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE-YSEELVLEAHSAGVKVVPQVG---SFDEARKAV-- 127 (332)
Q Consensus 54 ~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~-~~~~~i~~~~~~g~~v~~~v~---s~~~a~~a~-- 127 (332)
++.++++..+.|+..-++ +...++.+.+ .++++.++... ...++++.+-+.+.+|+.+-+ ++++...+.
T Consensus 80 ~l~~~~~~~Glp~~te~~----d~~~~~~l~~-~vd~~kIgA~~~~n~~Ll~~~a~~~kPV~lk~G~~~t~~ei~~Av~~ 154 (292)
T 1o60_A 80 IFQELKDTFGVKIITDVH----EIYQCQPVAD-VVDIIQLPAFLARQTDLVEAMAKTGAVINVKKPQFLSPSQMGNIVEK 154 (292)
T ss_dssp HHHHHHHHHCCEEEEECC----SGGGHHHHHT-TCSEEEECGGGTTCHHHHHHHHHTTCEEEEECCTTSCGGGHHHHHHH
T ss_pred HHHHHHHHcCCcEEEecC----CHHHHHHHHh-cCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHH
Confidence 344444445666665544 3456776666 69999997432 234577777778999987644 566655543
Q ss_pred --HcCC-CEEEEe-cCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe-----------ecCcCCH------HHHHHHHH
Q 020013 128 --NAGV-DAIIVQ-GREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA-----------AGGIVDA------RGYVAALS 186 (332)
Q Consensus 128 --~~g~-D~ivv~-G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia-----------aGGI~~~------~~v~~al~ 186 (332)
..|. +.+++. |... +.. .....+..++.+++... ++||+. .|+-+.+ .-..++.+
T Consensus 155 i~~~Gn~~i~L~~rg~~~-~y~-~~~~dl~~i~~lk~~~~--~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva 230 (292)
T 1o60_A 155 IEECGNDKIILCDRGTNF-GYD-NLIVDMLGFSVMKKASK--GSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLA 230 (292)
T ss_dssp HHHTTCCCEEEEECCEEC-STT-CEECCTTHHHHHHHHTT--SCCEEEEHHHHCC------------CTTHHHHHHHHHH
T ss_pred HHHcCCCeEEEEECCCCC-CCC-ccccCHHHHHHHHhhCC--CCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHH
Confidence 4575 666664 3211 111 11134666777776542 589998 2333223 23346778
Q ss_pred cCcceeeecccc
Q 020013 187 LGAQGICLGTRF 198 (332)
Q Consensus 187 ~GA~gV~~GT~f 198 (332)
+||+|+++=+-|
T Consensus 231 ~Ga~Gl~IE~H~ 242 (292)
T 1o60_A 231 VGIAGLFLEAHP 242 (292)
T ss_dssp HCCSEEEEEEES
T ss_pred cCCCEEEEEecC
Confidence 999999986554
No 356
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=91.99 E-value=1.3 Score=33.70 Aligned_cols=84 Identities=21% Similarity=0.275 Sum_probs=57.5
Q ss_pred HHHHHhCCCEEEEecCCHHHHHHHH-HcC-CCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHH
Q 020013 103 VLEAHSAGVKVVPQVGSFDEARKAV-NAG-VDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG 180 (332)
Q Consensus 103 i~~~~~~g~~v~~~v~s~~~a~~a~-~~g-~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~ 180 (332)
.+.+++.|..+.. +.+.+++.... +.. +|.|++.-.-. ....+.++..+++.- ..++|||+-.+-.+.+.
T Consensus 24 ~~~L~~~g~~v~~-~~~~~~a~~~~~~~~~~dlvi~D~~l~------~~~g~~~~~~l~~~~-~~~~~ii~~s~~~~~~~ 95 (136)
T 3hdv_A 24 ILYLKSRGIDAVG-ADGAEEARLYLHYQKRIGLMITDLRMQ------PESGLDLIRTIRASE-RAALSIIVVSGDTDVEE 95 (136)
T ss_dssp HHHHHHTTCCEEE-ESSHHHHHHHHHHCTTEEEEEECSCCS------SSCHHHHHHHHHTST-TTTCEEEEEESSCCHHH
T ss_pred HHHHHHcCceEEE-eCCHHHHHHHHHhCCCCcEEEEeccCC------CCCHHHHHHHHHhcC-CCCCCEEEEeCCCChHH
Confidence 3445566877654 66777766554 444 89888843211 123467778877641 12689999888889999
Q ss_pred HHHHHHcCcceeee
Q 020013 181 YVAALSLGAQGICL 194 (332)
Q Consensus 181 v~~al~~GA~gV~~ 194 (332)
+.+++..|++++..
T Consensus 96 ~~~~~~~g~~~~l~ 109 (136)
T 3hdv_A 96 AVDVMHLGVVDFLL 109 (136)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHhCCcceEEe
Confidence 99999999998864
No 357
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=91.93 E-value=0.48 Score=43.71 Aligned_cols=79 Identities=20% Similarity=0.340 Sum_probs=49.6
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~ 197 (332)
.++...+.|+|+|++-|..+-++......-..++..+++...+ ++|||+.=|=.+-+++. .+-++|||++++-+.
T Consensus 57 lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 57 LIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR-RVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3445678899999997764444331222235566666766643 68988654432434433 344589999999999
Q ss_pred cccC
Q 020013 198 FVAS 201 (332)
Q Consensus 198 fl~t 201 (332)
+...
T Consensus 136 ~Y~~ 139 (343)
T 2v9d_A 136 YYWK 139 (343)
T ss_dssp SSSC
T ss_pred CCCC
Confidence 8754
No 358
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=91.91 E-value=4.2 Score=36.18 Aligned_cols=121 Identities=14% Similarity=0.205 Sum_probs=76.6
Q ss_pred ccceecCCCC---CCCCcHHHHHHHHhCCCceeecCC---------------CCCCHHHHHHHHHHHHhhcCCcEEEEee
Q 020013 10 EYGIVQAPLG---PDISGPELVAAVANAGGLGLLRAP---------------DWEAPDYLRDLIRKTRSLTERPFGVGVV 71 (332)
Q Consensus 10 ~~Pii~apM~---~g~s~~~la~avs~aGglG~i~~~---------------~~~~~e~~~~~i~~~r~~~~~p~gvnl~ 71 (332)
+.||+.+ +. ++.....+..++.++|.-|++-.+ ..++.+...+.+++.+++ +. +-+-..
T Consensus 94 ~iPV~Ag-v~~~DP~~~~g~~Le~lk~~Gf~Gv~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~-gL-~Ti~~v 170 (286)
T 2p10_A 94 HTPVLAG-VNGTDPFMVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL-DL-LTTPYV 170 (286)
T ss_dssp SSCEEEE-ECTTCTTCCHHHHHHHHHHHTCCEEEECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHT-TC-EECCEE
T ss_pred CCCEEEE-ECCcCCCcCHHHHHHHHHHhCCceEEECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHC-CC-eEEEec
Confidence 5687765 53 233466777999999998986432 123556666777777764 21 222111
Q ss_pred cCCCCHHHHHHHHhcCCcEEEEccCCC------------c---HHHHHH----HHh--CCCEEEEe---cCCHHHHHHHH
Q 020013 72 LAFPHNENIKAILSEKVAVLQVSWGEY------------S---EELVLE----AHS--AGVKVVPQ---VGSFDEARKAV 127 (332)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~I~~~~g~~------------~---~~~i~~----~~~--~g~~v~~~---v~s~~~a~~a~ 127 (332)
. +.+..+.+.+.++|+|..|.|.. . .++++. +++ .++.+++. +.++++++.++
T Consensus 171 ~---~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l 247 (286)
T 2p10_A 171 F---SPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFIL 247 (286)
T ss_dssp C---SHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHH
T ss_pred C---CHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHH
Confidence 1 25677788899999999886510 1 123322 232 46777754 46899999999
Q ss_pred Hc--CCCEEEE
Q 020013 128 NA--GVDAIIV 136 (332)
Q Consensus 128 ~~--g~D~ivv 136 (332)
+. |+|+++.
T Consensus 248 ~~t~G~~G~~g 258 (286)
T 2p10_A 248 DSCQGCHGFYG 258 (286)
T ss_dssp HHCTTCCEEEE
T ss_pred hcCCCccEEEe
Confidence 98 8999875
No 359
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.89 E-value=2.1 Score=37.88 Aligned_cols=120 Identities=13% Similarity=0.088 Sum_probs=77.7
Q ss_pred CccceecCCCCCCCCc-------HHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHH
Q 020013 9 FEYGIVQAPLGPDISG-------PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIK 81 (332)
Q Consensus 9 ~~~Pii~apM~~g~s~-------~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~ 81 (332)
.+.|++ -|. ..+ ..++..++++|.=|++.. . .++++..+.++.+++. +. -.+-++.+....+.++
T Consensus 94 ~~~Piv--lm~--Y~npv~~~g~e~f~~~~~~aGvdgvii~-D-lp~ee~~~~~~~~~~~-gl-~~i~liaP~t~~eri~ 165 (267)
T 3vnd_A 94 PDMPIG--LLL--YANLVFANGIDEFYTKAQAAGVDSVLIA-D-VPVEESAPFSKAAKAH-GI-APIFIAPPNADADTLK 165 (267)
T ss_dssp TTCCEE--EEE--CHHHHHHHCHHHHHHHHHHHTCCEEEET-T-SCGGGCHHHHHHHHHT-TC-EEECEECTTCCHHHHH
T ss_pred CCCCEE--EEe--cCcHHHHhhHHHHHHHHHHcCCCEEEeC-C-CCHhhHHHHHHHHHHc-CC-eEEEEECCCCCHHHHH
Confidence 466887 464 223 568899999999998765 2 4667767777777663 21 1222333333457777
Q ss_pred HHHhcCCcEEEE--cc---CC------CcHHHHHHHHhC-CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 82 AILSEKVAVLQV--SW---GE------YSEELVLEAHSA-GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 82 ~~~~~~~~~I~~--~~---g~------~~~~~i~~~~~~-g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
.+.+....+|.+ .. |. ...++++++++. .++++. .++++++++.+...|+|++|+
T Consensus 166 ~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVV 234 (267)
T 3vnd_A 166 MVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAIS 234 (267)
T ss_dssp HHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 777776666654 11 21 123567777764 566664 467899999899999999999
No 360
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=91.87 E-value=1.6 Score=39.31 Aligned_cols=91 Identities=19% Similarity=0.198 Sum_probs=61.0
Q ss_pred HHHHHHh-CCCEEEEecCCHHHHHHHHHcCCCEEEEecCC----CCcccCCC-Cch---hhhHHHHHHHhCCCCCcEEee
Q 020013 102 LVLEAHS-AGVKVVPQVGSFDEARKAVNAGVDAIIVQGRE----AGGHVIGQ-DGL---ISLLPMVVDLIGDRDIPIIAA 172 (332)
Q Consensus 102 ~i~~~~~-~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~e----aGGh~~~~-~~~---~~ll~~i~~~~~~~~iPviaa 172 (332)
.++.+++ ....+++.+.+.-.|+.+.++|.|+|.+.|.. .-|+.+.. .+. ...+..|.+.. ++||++.
T Consensus 8 ~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~---~~PviaD 84 (295)
T 1xg4_A 8 AFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC---SLPLLVD 84 (295)
T ss_dssp HHHHHHHHSSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC---CSCEEEE
T ss_pred HHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC---CCCEEec
Confidence 3444444 45778899999999999999999999997762 22444322 222 33445555555 7899987
Q ss_pred c--CcC-CHHH----HHHHHHcCcceeeec
Q 020013 173 G--GIV-DARG----YVAALSLGAQGICLG 195 (332)
Q Consensus 173 G--GI~-~~~~----v~~al~~GA~gV~~G 195 (332)
. |-+ ++.+ +..++.+||+||.+=
T Consensus 85 ~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iE 114 (295)
T 1xg4_A 85 ADIGFGSSAFNVARTVKSMIKAGAAGLHIE 114 (295)
T ss_dssp CTTCSSSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 6 333 5544 456677999999873
No 361
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=91.87 E-value=2.9 Score=36.83 Aligned_cols=108 Identities=14% Similarity=0.085 Sum_probs=68.6
Q ss_pred HHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEE-c----cCC--
Q 020013 25 PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQV-S----WGE-- 97 (332)
Q Consensus 25 ~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~-~----~g~-- 97 (332)
..++....++|.=|++.. . .+.+++.+.++.+++. +... +-++.+....+.++.+.+....++.. + .|.
T Consensus 112 ~~~~~~~~~aGadgii~~-d-~~~e~~~~~~~~~~~~-g~~~-i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~ 187 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVA-D-VPVEESAPFRQAALRH-NIAP-IFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAEN 187 (268)
T ss_dssp HHHHHHHHHHTCCEEEET-T-CCGGGCHHHHHHHHHT-TCEE-ECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSS
T ss_pred HHHHHHHHHcCCCEEEEc-C-CCHHHHHHHHHHHHHc-CCcE-EEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCcc
Confidence 578888889998888865 2 4556667777777764 2212 22232323345566655554444432 1 121
Q ss_pred ----CcHHHHHHHHhC-CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 98 ----YSEELVLEAHSA-GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 98 ----~~~~~i~~~~~~-g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
+..++++++++. ++++.. .+++.+++..+...|+|++|+
T Consensus 188 ~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVV 233 (268)
T 1qop_A 188 RGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAIS 233 (268)
T ss_dssp CC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCchHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 135778888874 566654 467899999999999999998
No 362
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=91.79 E-value=0.29 Score=44.67 Aligned_cols=121 Identities=14% Similarity=0.220 Sum_probs=63.9
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~ 197 (332)
.+....+.|+|+|++-|..+-+.......-..++..+++.... ++|||+.=|=.+-++.. .+-.+|||++++-+.
T Consensus 37 lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 115 (318)
T 3qfe_A 37 YYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGP-DFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPP 115 (318)
T ss_dssp HHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCT-TSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 3455678899999997664333321212234566666666643 68988644432444433 334589999999999
Q ss_pred cccCc---cCCCCHHHHHHHhcCCCceEEEEecccCCCCCC-ceeecChHHHhhh
Q 020013 198 FVASE---ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAP-HRVLQTPFFSNWK 248 (332)
Q Consensus 198 fl~t~---Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~-~R~l~n~~~~~~~ 248 (332)
+...+ +...-+ |=+.|.++.+.- ..+++ .|++. +.-+....+.++.
T Consensus 116 ~y~~kp~~~~~l~~-~f~~ia~a~~lP-iilYn---~P~~t~g~~l~~~~~~~La 165 (318)
T 3qfe_A 116 AYFGKATTPPVIKS-FFDDVSCQSPLP-VVIYN---FPGVCNGIDLDSDMITTIA 165 (318)
T ss_dssp CC---CCCHHHHHH-HHHHHHHHCSSC-EEEEE---CCC----CCCCHHHHHHHH
T ss_pred cccCCCCCHHHHHH-HHHHHHhhCCCC-EEEEe---CCcccCCCCCCHHHHHHHH
Confidence 55431 212222 333444444433 23454 24543 4446656665554
No 363
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=91.70 E-value=1.9 Score=32.08 Aligned_cols=81 Identities=20% Similarity=0.164 Sum_probs=57.3
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..++..|..+. .+.+.+++.... +..+|.|++.-.-.+ ...+.++..+++.. ++|+|.-.+-.+.....
T Consensus 20 ~~L~~~g~~v~-~~~~~~~al~~~~~~~~dlii~D~~~p~------~~g~~~~~~lr~~~---~~~ii~~t~~~~~~~~~ 89 (120)
T 3f6p_A 20 FNLRKEGYEVH-CAHDGNEAVEMVEELQPDLILLDIMLPN------KDGVEVCREVRKKY---DMPIIMLTAKDSEIDKV 89 (120)
T ss_dssp HHHHHTTCEEE-EESSHHHHHHHHHTTCCSEEEEETTSTT------THHHHHHHHHHTTC---CSCEEEEEESSCHHHHH
T ss_pred HHHHhCCEEEE-EeCCHHHHHHHHhhCCCCEEEEeCCCCC------CCHHHHHHHHHhcC---CCCEEEEECCCChHHHH
Confidence 34556777765 577888887655 457999998532111 13367777777643 68988888877888889
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++.+||+++..
T Consensus 90 ~~~~~ga~~~l~ 101 (120)
T 3f6p_A 90 IGLEIGADDYVT 101 (120)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHhCCcceeEc
Confidence 999999998764
No 364
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=91.70 E-value=2.4 Score=32.36 Aligned_cols=84 Identities=21% Similarity=0.147 Sum_probs=58.1
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..+++.|..+. .+.+.+++.... +..+|.|++.=.-. ....+.++..+++.....++|||.-.+-.+.+...
T Consensus 22 ~~L~~~g~~v~-~~~~~~~al~~~~~~~~dlvl~D~~lp------~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~ 94 (136)
T 3t6k_A 22 LVLRGAGYEVR-RAASGEEALQQIYKNLPDALICDVLLP------GIDGYTLCKRVRQHPLTKTLPILMLTAQGDISAKI 94 (136)
T ss_dssp HHHHHTTCEEE-EESSHHHHHHHHHHSCCSEEEEESCCS------SSCHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHH
T ss_pred HHHHHCCCEEE-EeCCHHHHHHHHHhCCCCEEEEeCCCC------CCCHHHHHHHHHcCCCcCCccEEEEecCCCHHHHH
Confidence 34556777765 577888877654 46799999853211 12336777777763211268999888888889999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
+++.+||+++..
T Consensus 95 ~~~~~ga~~~l~ 106 (136)
T 3t6k_A 95 AGFEAGANDYLA 106 (136)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHhcCcceEEe
Confidence 999999998754
No 365
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=91.63 E-value=4.7 Score=36.10 Aligned_cols=183 Identities=14% Similarity=0.118 Sum_probs=105.4
Q ss_pred hhhcCCccceecCCCCCCCCcHHHHHHHHhCCCceee----------cCC--CCCCHHHHHHHHHHHHhhcCCcEEEEee
Q 020013 4 RGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLL----------RAP--DWEAPDYLRDLIRKTRSLTERPFGVGVV 71 (332)
Q Consensus 4 ~~~l~~~~Pii~apM~~g~s~~~la~avs~aGglG~i----------~~~--~~~~~e~~~~~i~~~r~~~~~p~gvnl~ 71 (332)
.+++.-.-||+ |. +.-++-.+..+.++|.=.+. +.+ ...+.+++...++.+...++.|+-+.+-
T Consensus 8 r~l~~~~~~i~---~~-~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d 83 (290)
T 2hjp_A 8 RAALDSGRLFT---AM-AAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADID 83 (290)
T ss_dssp HHHHHHCCCEE---EE-ECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECT
T ss_pred HHHHhCCCcEE---Ee-cCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECC
Confidence 34443334554 32 46688888878777631111 111 1346677777777777777888666542
Q ss_pred cCCCC----HHHHHHHHhcCCcEEEEccCC---------------CcH-HHHHHHH---h----CCCEEEEecCC-----
Q 020013 72 LAFPH----NENIKAILSEKVAVLQVSWGE---------------YSE-ELVLEAH---S----AGVKVVPQVGS----- 119 (332)
Q Consensus 72 ~~~~~----~~~~~~~~~~~~~~I~~~~g~---------------~~~-~~i~~~~---~----~g~~v~~~v~s----- 119 (332)
.-... .+.+..+.+.|+..|.+--+. .|. +.+++++ + .+..|..-...
T Consensus 84 ~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~ 163 (290)
T 2hjp_A 84 TGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGL 163 (290)
T ss_dssp TTTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTC
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccc
Confidence 22111 234556677899999873111 122 4455544 2 35667654432
Q ss_pred -HHH----HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceee
Q 020013 120 -FDE----ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGIC 193 (332)
Q Consensus 120 -~~~----a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~ 193 (332)
.++ ++...++|+|.|++++. .++...+.++.+.+.. .+|+++.-.-...-+..+.-++| ..-|.
T Consensus 164 g~~~ai~Ra~ay~eAGAd~i~~e~~---------~~~~~~~~~i~~~~~~-~vP~i~n~~~~~~~~~~eL~~lG~v~~v~ 233 (290)
T 2hjp_A 164 GQQEAVRRGQAYEEAGADAILIHSR---------QKTPDEILAFVKSWPG-KVPLVLVPTAYPQLTEADIAALSKVGIVI 233 (290)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCC---------CSSSHHHHHHHHHCCC-SSCEEECGGGCTTSCHHHHHTCTTEEEEE
T ss_pred cHHHHHHHHHHHHHcCCcEEEeCCC---------CCCHHHHHHHHHHcCC-CCCEEEeccCCCCCCHHHHHhcCCeeEEE
Confidence 243 44567899999999641 1224566788888731 39999641100112456667789 99999
Q ss_pred ecccccc
Q 020013 194 LGTRFVA 200 (332)
Q Consensus 194 ~GT~fl~ 200 (332)
.|...+.
T Consensus 234 ~~~~~~r 240 (290)
T 2hjp_A 234 YGNHAIR 240 (290)
T ss_dssp ECSHHHH
T ss_pred echHHHH
Confidence 8877653
No 366
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=91.62 E-value=2.1 Score=32.88 Aligned_cols=85 Identities=15% Similarity=0.076 Sum_probs=58.5
Q ss_pred HHHHhCCCE-EEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH
Q 020013 104 LEAHSAGVK-VVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 104 ~~~~~~g~~-v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v 181 (332)
+.++..|.. .+..+.+.+++..... ..+|.|++.-.-.+ ...+.++..+++.....++|||+-.+-.+.+.+
T Consensus 23 ~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~ 96 (144)
T 3kht_A 23 RVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPI------ANGFEVMSAVRKPGANQHTPIVILTDNVSDDRA 96 (144)
T ss_dssp HHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGG------GCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHH
T ss_pred HHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCC------CCHHHHHHHHHhcccccCCCEEEEeCCCCHHHH
Confidence 445556665 3566778888876654 46899998432111 133677778776211126899998888899999
Q ss_pred HHHHHcCcceeee
Q 020013 182 VAALSLGAQGICL 194 (332)
Q Consensus 182 ~~al~~GA~gV~~ 194 (332)
.+++.+||+++..
T Consensus 97 ~~~~~~ga~~~l~ 109 (144)
T 3kht_A 97 KQCMAAGASSVVD 109 (144)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 9999999998764
No 367
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=91.62 E-value=2.8 Score=31.25 Aligned_cols=82 Identities=21% Similarity=0.106 Sum_probs=56.7
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..+...|..+. .+.+.+++..... ..+|.+++.=.-.+ ...+.++..+++... ++|||.-.+-.+.+.+.
T Consensus 21 ~~l~~~~~~v~-~~~~~~~~~~~~~~~~~dlvi~D~~l~~------~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~ 91 (126)
T 1dbw_A 21 FMLTMNGFAVK-MHQSAEAFLAFAPDVRNGVLVTDLRMPD------MSGVELLRNLGDLKI--NIPSIVITGHGDVPMAV 91 (126)
T ss_dssp HHHHHTTCEEE-EESCHHHHHHHGGGCCSEEEEEECCSTT------SCHHHHHHHHHHTTC--CCCEEEEECTTCHHHHH
T ss_pred HHHHhCCcEEE-EeCCHHHHHHHHhcCCCCEEEEECCCCC------CCHHHHHHHHHhcCC--CCCEEEEECCCCHHHHH
Confidence 34455677765 5778887776554 46898888532111 123567777776432 68999888888889999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++..||+++..
T Consensus 92 ~~~~~ga~~~l~ 103 (126)
T 1dbw_A 92 EAMKAGAVDFIE 103 (126)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHhCHHHhee
Confidence 999999988764
No 368
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=91.62 E-value=2.9 Score=31.57 Aligned_cols=82 Identities=16% Similarity=0.086 Sum_probs=57.8
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..++..|..+. .+.+.+++.... ...+|.|++.-.-. ....+.++..+++... ++|+|+-.+-.+.+...
T Consensus 21 ~~L~~~g~~v~-~~~~~~~al~~~~~~~~dlvl~D~~l~------~~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~ 91 (132)
T 3crn_A 21 QILEFEGYEVE-IAATAGEGLAKIENEFFNLALFXIKLP------DMEGTELLEKAHKLRP--GMKKIMVTGYASLENSV 91 (132)
T ss_dssp HHHHHTTCEEE-EESSHHHHHHHHHHSCCSEEEECSBCS------SSBHHHHHHHHHHHCT--TSEEEEEESCCCHHHHH
T ss_pred HHHHHCCceEE-EeCCHHHHHHHHhcCCCCEEEEecCCC------CCchHHHHHHHHhhCC--CCcEEEEeccccHHHHH
Confidence 34555687765 677877776654 45799999843211 1133667777766432 68999988888889999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++..||+++..
T Consensus 92 ~~~~~ga~~~l~ 103 (132)
T 3crn_A 92 FSLNAGADAYIM 103 (132)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHhccchhhcc
Confidence 999999998764
No 369
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=91.61 E-value=0.61 Score=42.12 Aligned_cols=80 Identities=16% Similarity=0.285 Sum_probs=49.6
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~ 197 (332)
.++...+.|+|+|++-|..+-++......-..++..+++...+.++|||+.=|=.+-++.. .+-.+|||++++-+.
T Consensus 33 lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 112 (301)
T 3m5v_A 33 LIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAP 112 (301)
T ss_dssp HHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3445678899999997664433321112234556666666642258988754432444443 344589999999998
Q ss_pred cccC
Q 020013 198 FVAS 201 (332)
Q Consensus 198 fl~t 201 (332)
+...
T Consensus 113 ~y~~ 116 (301)
T 3m5v_A 113 YYNK 116 (301)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8764
No 370
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=91.61 E-value=2.5 Score=32.09 Aligned_cols=83 Identities=17% Similarity=0.169 Sum_probs=56.6
Q ss_pred HHHhCCCEEEEecCCHHHHHHHHH------cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCH
Q 020013 105 EAHSAGVKVVPQVGSFDEARKAVN------AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDA 178 (332)
Q Consensus 105 ~~~~~g~~v~~~v~s~~~a~~a~~------~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~ 178 (332)
.++..|...+..+.+.+++..... ..+|.|++.=.-. ....+.++..+++... ..+|||.-.+-.+.
T Consensus 21 ~L~~~g~~~v~~~~~~~~al~~~~~~~~~~~~~dlvllD~~mp------~~~G~~~~~~lr~~~~-~~~~ii~lt~~~~~ 93 (133)
T 2r25_B 21 MLNLEGIENIELACDGQEAFDKVKELTSKGENYNMIFMDVQMP------KVDGLLSTKMIRRDLG-YTSPIVALTAFADD 93 (133)
T ss_dssp HHHHTTCCCEEEESSHHHHHHHHHHHHHHTCCCSEEEECSCCS------SSCHHHHHHHHHHHSC-CCSCEEEEESCCSH
T ss_pred HHHHcCCceEEEECCHHHHHHHHHHHHhcCCCCCEEEEeCCCC------CCChHHHHHHHHhhcC-CCCCEEEEECCCCH
Confidence 344567655666777777766543 4689999842211 1123677777775322 25899988888888
Q ss_pred HHHHHHHHcCcceeee
Q 020013 179 RGYVAALSLGAQGICL 194 (332)
Q Consensus 179 ~~v~~al~~GA~gV~~ 194 (332)
+.+.+++.+||++...
T Consensus 94 ~~~~~~~~~ga~~~l~ 109 (133)
T 2r25_B 94 SNIKECLESGMNGFLS 109 (133)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEe
Confidence 9999999999998764
No 371
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.61 E-value=2.3 Score=38.40 Aligned_cols=112 Identities=12% Similarity=0.141 Sum_probs=71.8
Q ss_pred CHHHHHHHHhcCCcEEEEccCCCc------------------HHHHHHHHhCCCEEEEec-----------CCHHH----
Q 020013 76 HNENIKAILSEKVAVLQVSWGEYS------------------EELVLEAHSAGVKVVPQV-----------GSFDE---- 122 (332)
Q Consensus 76 ~~~~~~~~~~~~~~~I~~~~g~~~------------------~~~i~~~~~~g~~v~~~v-----------~s~~~---- 122 (332)
....++.+.+.+++.|.+.....+ .+.++.+++.|..+-..+ .+++.
T Consensus 83 ~~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~ 162 (307)
T 1ydo_A 83 NQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRL 162 (307)
T ss_dssp SHHHHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHH
T ss_pred CHHhHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHH
Confidence 466788899999999876532211 234666788899874321 24444
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee----cCcCCHHHHHHHHHcCcceee
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA----GGIVDARGYVAALSLGAQGIC 193 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa----GGI~~~~~v~~al~~GA~gV~ 193 (332)
++.+.+.|+|.|.+--+ -|.. .+.....++..+++.++ ++|+-.- -|.+ -.|..+++.+||+-|.
T Consensus 163 ~~~~~~~Ga~~i~l~DT--~G~~-~P~~v~~lv~~l~~~~~--~~~l~~H~Hnd~Gla-~AN~laAv~aGa~~vd 231 (307)
T 1ydo_A 163 SEALFEFGISELSLGDT--IGAA-NPAQVETVLEALLARFP--ANQIALHFHDTRGTA-LANMVTALQMGITVFD 231 (307)
T ss_dssp HHHHHHHTCSCEEEECS--SCCC-CHHHHHHHHHHHHTTSC--GGGEEEECBGGGSCH-HHHHHHHHHHTCCEEE
T ss_pred HHHHHhcCCCEEEEcCC--CCCc-CHHHHHHHHHHHHHhCC--CCeEEEEECCCCchH-HHHHHHHHHhCCCEEE
Confidence 44567889999988433 2222 23344667777776553 4676554 5774 4777888999998665
No 372
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=91.60 E-value=1.1 Score=38.89 Aligned_cols=60 Identities=15% Similarity=0.199 Sum_probs=48.3
Q ss_pred HHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEE-ecCCHHHHHHHHHcCCCEEEEecC
Q 020013 80 IKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVP-QVGSFDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~-~v~s~~~a~~a~~~g~D~ivv~G~ 139 (332)
.+.+.+.+++.+..+.....+++++.+++.|++|+. ++.+.++.+.+.+.|+|+|+..-+
T Consensus 177 ~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~v~~wTvn~~~~~~~l~~~GvdgI~TD~p 237 (247)
T 2otd_A 177 RELTARLGCVSIHLNHKLLDKARVMQLKDAGLRILVYTVNKPQHAAELLRWGVDCICTDAI 237 (247)
T ss_dssp HHHHHHHTCSEEEEEGGGCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHTCSEEEESCT
T ss_pred HHHHHHcCCeEEecChHhCCHHHHHHHHHCCCEEEEEccCCHHHHHHHHHcCCCEEEeCCH
Confidence 344566788988887555567899999999999875 477899999999999999987544
No 373
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=91.59 E-value=2.1 Score=32.33 Aligned_cols=86 Identities=13% Similarity=0.039 Sum_probs=59.0
Q ss_pred HHHHHhCCCE-EEEecCCHHHHHHHHH--------cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeec
Q 020013 103 VLEAHSAGVK-VVPQVGSFDEARKAVN--------AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAG 173 (332)
Q Consensus 103 i~~~~~~g~~-v~~~v~s~~~a~~a~~--------~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaG 173 (332)
.+.++..|.. .+..+.+.+++..... ..+|.|++.-.-. ....+.++..+++.....++|||+-.
T Consensus 19 ~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~------~~~g~~~~~~l~~~~~~~~~pii~ls 92 (140)
T 1k68_A 19 QEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLP------KKDGREVLAEIKSDPTLKRIPVVVLS 92 (140)
T ss_dssp HHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCS------SSCHHHHHHHHHHSTTGGGSCEEEEE
T ss_pred HHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCC------cccHHHHHHHHHcCcccccccEEEEe
Confidence 3445556652 4556788888887776 4699999853211 12346777777764210268999888
Q ss_pred CcCCHHHHHHHHHcCcceeee
Q 020013 174 GIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 174 GI~~~~~v~~al~~GA~gV~~ 194 (332)
+-.+.+.+.+++.+|++++..
T Consensus 93 ~~~~~~~~~~~~~~g~~~~l~ 113 (140)
T 1k68_A 93 TSINEDDIFHSYDLHVNCYIT 113 (140)
T ss_dssp SCCCHHHHHHHHHTTCSEEEE
T ss_pred cCCcHHHHHHHHHhchhheec
Confidence 887889999999999998764
No 374
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=91.58 E-value=0.32 Score=44.26 Aligned_cols=120 Identities=8% Similarity=0.086 Sum_probs=64.5
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH----HHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~----~al~~GA~gV~~GT~f 198 (332)
++...+.|+|+|++-|..+-+.......-..++..+++.. + ++|||+.=|=.+-++.. .+-++|||++++-+.+
T Consensus 35 v~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-g-rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 112 (313)
T 3dz1_A 35 TDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-K-SMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPP 112 (313)
T ss_dssp HHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-T-TSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCT
T ss_pred HHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-C-CCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 4456788999999976643333211122345666677766 3 79998754432444433 3345899999998887
Q ss_pred ccCccCCCCHHHHHHHhcCC-CceEEEEecccCCCCCCceeecChHHHhhh
Q 020013 199 VASEESYAHPEYKRKLVEMD-KTEYTDVFGRARWPGAPHRVLQTPFFSNWK 248 (332)
Q Consensus 199 l~t~Es~~~~~~k~~~~~~~-~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 248 (332)
....+...-+-|++.....+ +.- ..+++ .|++.+.-|...++.++.
T Consensus 113 ~~~s~~~l~~~f~~va~a~~~~lP-iilYn---~P~~tg~~l~~~~~~~La 159 (313)
T 3dz1_A 113 SLRTDEQITTYFRQATEAIGDDVP-WVLQD---YPLTLSVVMTPKVIRQIV 159 (313)
T ss_dssp TCCSHHHHHHHHHHHHHHHCTTSC-EEEEE---CHHHHCCCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCc-EEEEe---CccccCcCCCHHHHHHHH
Confidence 43222222222333322222 133 23454 234444456656666554
No 375
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=91.56 E-value=5.5 Score=35.61 Aligned_cols=122 Identities=14% Similarity=0.071 Sum_probs=76.9
Q ss_pred CHHHHHHHHhcCCcEEEEccCCCc------------------HHHHHHHHhCCCEEEEec-----------CCHHH----
Q 020013 76 HNENIKAILSEKVAVLQVSWGEYS------------------EELVLEAHSAGVKVVPQV-----------GSFDE---- 122 (332)
Q Consensus 76 ~~~~~~~~~~~~~~~I~~~~g~~~------------------~~~i~~~~~~g~~v~~~v-----------~s~~~---- 122 (332)
....++.+.+.+++.|.+...... .+.++.+++.|.++...+ .+++.
T Consensus 82 ~~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~ 161 (298)
T 2cw6_A 82 NLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEV 161 (298)
T ss_dssp SHHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHH
T ss_pred CHHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHH
Confidence 466788999999999887533211 124566778899875332 24554
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee----cCcCCHHHHHHHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA----GGIVDARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa----GGI~~~~~v~~al~~GA~gV~~GT~f 198 (332)
++.+.+.|+|.|.+.-. -|.. .+.....++..+++.++ ++|+-.- -|.+ -.+..+++.+||+-|.. .+
T Consensus 162 ~~~~~~~Ga~~i~l~DT--~G~~-~P~~~~~lv~~l~~~~~--~~~i~~H~Hn~~Gla-~An~laA~~aGa~~vd~--tv 233 (298)
T 2cw6_A 162 TKKFYSMGCYEISLGDT--IGVG-TPGIMKDMLSAVMQEVP--LAALAVHCHDTYGQA-LANTLMALQMGVSVVDS--SV 233 (298)
T ss_dssp HHHHHHTTCSEEEEEET--TSCC-CHHHHHHHHHHHHHHSC--GGGEEEEEBCTTSCH-HHHHHHHHHTTCCEEEE--BT
T ss_pred HHHHHHcCCCEEEecCC--CCCc-CHHHHHHHHHHHHHhCC--CCeEEEEECCCCchH-HHHHHHHHHhCCCEEEe--ec
Confidence 44567899999988533 2222 23345677888877663 4666543 4663 46777888999987764 34
Q ss_pred ccCccCC
Q 020013 199 VASEESY 205 (332)
Q Consensus 199 l~t~Es~ 205 (332)
..--|||
T Consensus 234 ~GlG~cp 240 (298)
T 2cw6_A 234 AGLGGCP 240 (298)
T ss_dssp TSCCCCT
T ss_pred ccccCCC
Confidence 4444543
No 376
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=91.56 E-value=0.73 Score=42.77 Aligned_cols=78 Identities=18% Similarity=0.336 Sum_probs=48.4
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe-ecCcCCHHHHH---HHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA-AGGIVDARGYV---AALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia-aGGI~~~~~v~---~al~~GA~gV~~GT~f 198 (332)
+....+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+ .|+.++.+.+. .+-++|||++++-+.+
T Consensus 86 v~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGvg~~st~eai~la~~A~~~Gadavlvv~Py 164 (360)
T 4dpp_A 86 VNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGG-SIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPY 164 (360)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-TSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 345668899999997664333321111224556666666643 689987 44454433332 3345899999999887
Q ss_pred ccC
Q 020013 199 VAS 201 (332)
Q Consensus 199 l~t 201 (332)
...
T Consensus 165 Y~k 167 (360)
T 4dpp_A 165 YGK 167 (360)
T ss_dssp SSC
T ss_pred CCC
Confidence 754
No 377
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=91.52 E-value=2.6 Score=32.75 Aligned_cols=82 Identities=22% Similarity=0.225 Sum_probs=58.2
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.+...|..+. .+.+.+++..... ..+|.|++.-.-.+ ...+.++..+++..+ .+|||+-.+-.+.+...
T Consensus 25 ~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~------~~g~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~ 95 (154)
T 2rjn_A 25 RLIKRLGCNII-TFTSPLDALEALKGTSVQLVISDMRMPE------MGGEVFLEQVAKSYP--DIERVVISGYADAQATI 95 (154)
T ss_dssp HHHHTTTCEEE-EESCHHHHHHHHTTSCCSEEEEESSCSS------SCHHHHHHHHHHHCT--TSEEEEEECGGGHHHHH
T ss_pred HHHHHcCCeEE-EeCCHHHHHHHHhcCCCCEEEEecCCCC------CCHHHHHHHHHHhCC--CCcEEEEecCCCHHHHH
Confidence 34555787766 6788888877654 46899998532111 233677778776543 68999888887888899
Q ss_pred HHHHcC-cceeee
Q 020013 183 AALSLG-AQGICL 194 (332)
Q Consensus 183 ~al~~G-A~gV~~ 194 (332)
.++..| ++++..
T Consensus 96 ~~~~~g~~~~~l~ 108 (154)
T 2rjn_A 96 DAVNRGKISRFLL 108 (154)
T ss_dssp HHHHTTCCSEEEE
T ss_pred HHHhccchheeee
Confidence 999998 887764
No 378
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=91.45 E-value=5.1 Score=33.79 Aligned_cols=110 Identities=14% Similarity=0.142 Sum_probs=71.1
Q ss_pred HHHHHHHhcCCcEEEEccCCCcHHHHHHHHh-CCCEEEEe-----------c-CCHHHHHHHHHcCCCEEEEecCCCCcc
Q 020013 78 ENIKAILSEKVAVLQVSWGEYSEELVLEAHS-AGVKVVPQ-----------V-GSFDEARKAVNAGVDAIIVQGREAGGH 144 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~-~g~~v~~~-----------v-~s~~~a~~a~~~g~D~ivv~G~eaGGh 144 (332)
+..+.+.+.|++.++.. ..+.++.+++ .+++++.. + .+.+++..+.+.|+|.|.+... +- +
T Consensus 27 ~~a~~~~~~Ga~~i~~~----~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~-~~-~ 100 (223)
T 1y0e_A 27 KMALAAYEGGAVGIRAN----TKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDAT-LQ-Q 100 (223)
T ss_dssp HHHHHHHHHTCSEEEEE----SHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECS-CS-C
T ss_pred HHHHHHHHCCCeeeccC----CHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeee-cc-c
Confidence 34455667788888764 2345666654 45666421 1 3567788889999999988432 11 0
Q ss_pred cCCC-CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeeccccc
Q 020013 145 VIGQ-DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 199 (332)
Q Consensus 145 ~~~~-~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl 199 (332)
.+ .....++..+++.++ +.+++. ++.+.+++.++..+|+|.+.++....
T Consensus 101 --~p~~~~~~~i~~~~~~~~--~~~v~~--~~~t~~e~~~~~~~G~d~i~~~~~g~ 150 (223)
T 1y0e_A 101 --RPKETLDELVSYIRTHAP--NVEIMA--DIATVEEAKNAARLGFDYIGTTLHGY 150 (223)
T ss_dssp --CSSSCHHHHHHHHHHHCT--TSEEEE--ECSSHHHHHHHHHTTCSEEECTTTTS
T ss_pred --CcccCHHHHHHHHHHhCC--CceEEe--cCCCHHHHHHHHHcCCCEEEeCCCcC
Confidence 11 234567777777653 466654 66789999999999999987765433
No 379
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=91.41 E-value=1.8 Score=33.65 Aligned_cols=85 Identities=16% Similarity=0.117 Sum_probs=58.0
Q ss_pred HHHHhCCCE-EEEecCCHHHHHHHHH----------cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee
Q 020013 104 LEAHSAGVK-VVPQVGSFDEARKAVN----------AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA 172 (332)
Q Consensus 104 ~~~~~~g~~-v~~~v~s~~~a~~a~~----------~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa 172 (332)
+.+++.|.. .+..+.+.+++....+ ..+|.|++.-.-. ....+.++..+++.....++|||+-
T Consensus 22 ~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~------~~~g~~~~~~lr~~~~~~~~pii~~ 95 (152)
T 3heb_A 22 KNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLP------DMTGIDILKLVKENPHTRRSPVVIL 95 (152)
T ss_dssp HHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCS------SSBHHHHHHHHHHSTTTTTSCEEEE
T ss_pred HHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCC------CCcHHHHHHHHHhcccccCCCEEEE
Confidence 445566653 3446778888887763 5689998853211 1234678888876211126899988
Q ss_pred cCcCCHHHHHHHHHcCcceeee
Q 020013 173 GGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 173 GGI~~~~~v~~al~~GA~gV~~ 194 (332)
.+-.+.+.+.+++.+||+++..
T Consensus 96 t~~~~~~~~~~~~~~g~~~~l~ 117 (152)
T 3heb_A 96 TTTDDQREIQRCYDLGANVYIT 117 (152)
T ss_dssp ESCCCHHHHHHHHHTTCSEEEE
T ss_pred ecCCCHHHHHHHHHCCCcEEEe
Confidence 8888889999999999998763
No 380
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=91.41 E-value=1.9 Score=35.95 Aligned_cols=85 Identities=19% Similarity=0.118 Sum_probs=58.5
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHHc--------------CCCEEEEecCCCCcccCCCCchhhhHHHHHHHhC--CCCC
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVNA--------------GVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIG--DRDI 167 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~~--------------g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~--~~~i 167 (332)
+.+++.|...+..+.+.++|...... .+|.|+++=.-. ....+.++.++++... ..++
T Consensus 79 ~~L~~~g~~~v~~a~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp------~~~G~el~~~lr~~~~~~~~~~ 152 (206)
T 3mm4_A 79 GKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMP------EMDGYEATREIRKVEKSYGVRT 152 (206)
T ss_dssp HHHHHTTCSEEEEESSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCS------SSCHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHcCCCeeeeeCCHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCC------CCCHHHHHHHHHhhhhhcCCCC
Confidence 44566777455667888888776543 699999853211 1234677777776410 1268
Q ss_pred cEEeecCcC-CHHHHHHHHHcCcceeee
Q 020013 168 PIIAAGGIV-DARGYVAALSLGAQGICL 194 (332)
Q Consensus 168 PviaaGGI~-~~~~v~~al~~GA~gV~~ 194 (332)
|||+..+-. +.+.+.+++.+|+++++.
T Consensus 153 piI~ls~~~~~~~~~~~~~~~Ga~~~l~ 180 (206)
T 3mm4_A 153 PIIAVSGHDPGSEEARETIQAGMDAFLD 180 (206)
T ss_dssp CEEEEESSCCCHHHHHHHHHHTCSEEEE
T ss_pred cEEEEECCCCcHHHHHHHHhCCCCEEEc
Confidence 999888876 778888999999998774
No 381
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=91.40 E-value=0.44 Score=43.25 Aligned_cols=121 Identities=12% Similarity=0.127 Sum_probs=65.3
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecC-cCCHHHH---HHHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGG-IVDARGY---VAALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGG-I~~~~~v---~~al~~GA~gV~~GT~f 198 (332)
+....+.|+|+|++-|..+-++......-..++..+++.... ++|||+.-| .++.+.+ ..+-++|||++++-+.+
T Consensus 41 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 119 (307)
T 3s5o_A 41 LHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPK-NRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPC 119 (307)
T ss_dssp HHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCT-TSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCC-CCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 445567899999997664333321212234556666666543 689887444 4443333 24446899999999887
Q ss_pred ccC---ccCCCCHHHHHHHhcCCCceEEEEecccCCCCCCceeecChHHHhhhc
Q 020013 199 VAS---EESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWKN 249 (332)
Q Consensus 199 l~t---~Es~~~~~~k~~~~~~~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~ 249 (332)
... .+...-+.|+ .|.++.+.- ..+++. |++.+.-+....+.++.+
T Consensus 120 y~~~~~s~~~l~~~f~-~ia~a~~lP-iilYn~---P~~tg~~l~~~~~~~La~ 168 (307)
T 3s5o_A 120 YYRGRMSSAALIHHYT-KVADLSPIP-VVLYSV---PANTGLDLPVDAVVTLSQ 168 (307)
T ss_dssp TTGGGCCHHHHHHHHH-HHHHHCSSC-EEEEEC---HHHHSCCCCHHHHHHHHT
T ss_pred cCCCCCCHHHHHHHHH-HHHhhcCCC-EEEEeC---CcccCCCCCHHHHHHHhc
Confidence 753 2222323333 344444433 234431 333334455555555443
No 382
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=91.40 E-value=2.9 Score=31.13 Aligned_cols=85 Identities=15% Similarity=0.159 Sum_probs=56.4
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..++..|...+..+.+.+++..... ..+|.+++.-.-. ....+.++..+++......+|++.-.+-.+.+.+.
T Consensus 22 ~~l~~~~~~~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~------~~~g~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~ 95 (128)
T 1jbe_A 22 NLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMP------NMDGLELLKTIRAXXAMSALPVLMVTAEAKKENII 95 (128)
T ss_dssp HHHHHTTCCCEEEESSHHHHHHHHTTCCCCEEEEESCCS------SSCHHHHHHHHHC--CCTTCCEEEEESSCCHHHHH
T ss_pred HHHHHcCCcEEEeeCCHHHHHHHHHhcCCCEEEEeCCCC------CCCHHHHHHHHHhhcccCCCcEEEEecCccHHHHH
Confidence 3445567645556778877776554 4689998853211 11336677777753211268999888887889999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
+++..||+++..
T Consensus 96 ~~~~~ga~~~l~ 107 (128)
T 1jbe_A 96 AAAQAGASGYVV 107 (128)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHhCcCceee
Confidence 999999998753
No 383
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=91.39 E-value=1 Score=39.25 Aligned_cols=78 Identities=21% Similarity=0.172 Sum_probs=52.0
Q ss_pred HHHHHHHHHcCCCEEEEe-cCCCCcccCCC-CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHH----HHcCcceee
Q 020013 120 FDEARKAVNAGVDAIIVQ-GREAGGHVIGQ-DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAA----LSLGAQGIC 193 (332)
Q Consensus 120 ~~~a~~a~~~g~D~ivv~-G~eaGGh~~~~-~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~a----l~~GA~gV~ 193 (332)
+.|++.|.+.|+|-|-+. +. |--..+. .....-+.++++.....-++||..-|.-+.+.+..+ ..+|||.|-
T Consensus 98 v~Ea~~Ai~~GAdEIDmViNi--g~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVK 175 (239)
T 3ngj_A 98 AYETKVAVEQGAEEVDMVINI--GMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVK 175 (239)
T ss_dssp HHHHHHHHHTTCSEEEEECCH--HHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEEeeh--HHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEE
Confidence 357888999999988652 22 1000011 123455667777664223678877777788888877 678999999
Q ss_pred eccccc
Q 020013 194 LGTRFV 199 (332)
Q Consensus 194 ~GT~fl 199 (332)
..|.|-
T Consensus 176 TSTGf~ 181 (239)
T 3ngj_A 176 TSTGFG 181 (239)
T ss_dssp CCCSSS
T ss_pred CCCCCC
Confidence 999985
No 384
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=91.37 E-value=0.65 Score=43.72 Aligned_cols=83 Identities=25% Similarity=0.268 Sum_probs=56.9
Q ss_pred CEEEEecCC----HHHHHHHHHc--CCCEEEEecCCCCcccCCCCchhhhHHHHHHHh---CCCCCcEEeecCcCCHHHH
Q 020013 111 VKVVPQVGS----FDEARKAVNA--GVDAIIVQGREAGGHVIGQDGLISLLPMVVDLI---GDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 111 ~~v~~~v~s----~~~a~~a~~~--g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~---~~~~iPviaaGGI~~~~~v 181 (332)
.++...+.| .+++.++.+. ++|+|-++.+.. ..+ ....++.++++.+ ...++.|+++||| |.+++
T Consensus 211 ~~~~vlvDT~d~~~~~al~~a~~l~~~d~IrlDs~~~---~~g--d~~~~v~~v~~~ld~~G~~~~~I~aSggl-~~~~i 284 (398)
T 2i1o_A 211 QKSVLLIDTYMDEKFAAIKIAEMFDKVDYIRLDTPSS---RRG--NFEALIREVRWELALRGRSDIKIMVSGGL-DENTV 284 (398)
T ss_dssp SCCEEECCSSSCHHHHHHHHHTTCSCCCEEEECCCGG---GCS--CHHHHHHHHHHHHHHTTCTTSEEEEESSC-CHHHH
T ss_pred CCEEEEEcCchHHHHHHHHHHHhhcCCcEEEeCCCCC---Ccc--cHHHHHHHHHHHHHhCCCCceEEEEeCCC-CHHHH
Confidence 445666655 4566655555 999999976521 001 2234455554432 1125789999999 99999
Q ss_pred HHHHHcCcceeeeccccc
Q 020013 182 VAALSLGAQGICLGTRFV 199 (332)
Q Consensus 182 ~~al~~GA~gV~~GT~fl 199 (332)
.++.+.|+|.+-+||.+.
T Consensus 285 ~~l~~~GvD~~gvGt~l~ 302 (398)
T 2i1o_A 285 KKLREAGAEAFGVGTSIS 302 (398)
T ss_dssp HHHHHTTCCEEEECHHHH
T ss_pred HHHHHcCCCEEEeCcccC
Confidence 999999999999999876
No 385
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=91.37 E-value=2.1 Score=36.68 Aligned_cols=82 Identities=17% Similarity=0.125 Sum_probs=60.0
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..+...|..+. .+.+.+++.... ...+|.|+++-.-.+ ...+.++.++++... ++|||+-.+-.+.+.+.
T Consensus 41 ~~L~~~g~~v~-~~~~~~~al~~~~~~~~dlvllD~~lp~------~~g~~~~~~lr~~~~--~~~ii~lt~~~~~~~~~ 111 (250)
T 3r0j_A 41 VSLKFQGFEVY-TATNGAQALDRARETRPDAVILDVXMPG------MDGFGVLRRLRADGI--DAPALFLTARDSLQDKI 111 (250)
T ss_dssp HHHHHTTCEEE-EESSHHHHHHHHHHHCCSEEEEESCCSS------SCHHHHHHHHHHTTC--CCCEEEEECSTTHHHHH
T ss_pred HHHHHCCCEEE-EECCHHHHHHHHHhCCCCEEEEeCCCCC------CCHHHHHHHHHhcCC--CCCEEEEECCCCHHHHH
Confidence 34556788776 677888877654 457999999633111 234678888877542 68999988888999999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
+++.+||++...
T Consensus 112 ~~~~~Ga~~yl~ 123 (250)
T 3r0j_A 112 AGLTLGGDDYVT 123 (250)
T ss_dssp HHHTSTTCEEEE
T ss_pred HHHHcCCcEEEe
Confidence 999999998764
No 386
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=91.36 E-value=1.4 Score=34.40 Aligned_cols=82 Identities=20% Similarity=0.101 Sum_probs=53.0
Q ss_pred HHHHhC-CCEEEEecCCHHHHHHHHH--cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHH
Q 020013 104 LEAHSA-GVKVVPQVGSFDEARKAVN--AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG 180 (332)
Q Consensus 104 ~~~~~~-g~~v~~~v~s~~~a~~a~~--~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~ 180 (332)
..+++. |...+..+.+.+++..... ..+|.|++.-.-.+ ...+.++..+++..+ ++|||+-.+-.+.+.
T Consensus 21 ~~L~~~~g~~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~------~~g~~~~~~l~~~~~--~~~ii~ls~~~~~~~ 92 (154)
T 2qsj_A 21 NLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPD------AEAIDGLVRLKRFDP--SNAVALISGETDHEL 92 (154)
T ss_dssp HHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC------------CHHHHHHHHHHCT--TSEEEEC-----CHH
T ss_pred HHHHhCCCceEEEEecCHHHHHHHHhccCCCCEEEEeCCCCC------CchHHHHHHHHHhCC--CCeEEEEeCCCCHHH
Confidence 344444 7766777888888887665 46899998432111 123567777776543 689999888878888
Q ss_pred HHHHHHcCcceee
Q 020013 181 YVAALSLGAQGIC 193 (332)
Q Consensus 181 v~~al~~GA~gV~ 193 (332)
+..++..|++++.
T Consensus 93 ~~~~~~~g~~~~l 105 (154)
T 2qsj_A 93 IRAALEAGADGFI 105 (154)
T ss_dssp HHHHHHTTCCBBC
T ss_pred HHHHHHccCCEEE
Confidence 8999999999875
No 387
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=91.36 E-value=1 Score=34.81 Aligned_cols=83 Identities=12% Similarity=0.204 Sum_probs=56.0
Q ss_pred HHHHhCC-CEEEEecCCHHHHHHHHH--cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHH
Q 020013 104 LEAHSAG-VKVVPQVGSFDEARKAVN--AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG 180 (332)
Q Consensus 104 ~~~~~~g-~~v~~~v~s~~~a~~a~~--~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~ 180 (332)
+.+...| ..+....+..+.+....+ ..+|.|++.-.-. ....+.++..+++... ++|||+-.+-.+.+.
T Consensus 38 ~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~dlvi~D~~l~------~~~g~~~~~~l~~~~~--~~~ii~lt~~~~~~~ 109 (146)
T 4dad_A 38 RLVGDAGRYRVTRTVGRAAQIVQRTDGLDAFDILMIDGAAL------DTAELAAIEKLSRLHP--GLTCLLVTTDASSQT 109 (146)
T ss_dssp HHHHHHCSCEEEEECCCHHHHTTCHHHHTTCSEEEEECTTC------CHHHHHHHHHHHHHCT--TCEEEEEESCCCHHH
T ss_pred HHHhhCCCeEEEEeCCHHHHHHHHHhcCCCCCEEEEeCCCC------CccHHHHHHHHHHhCC--CCcEEEEeCCCCHHH
Confidence 3445556 777654444444444444 6799999853211 1234677778777543 689999999889999
Q ss_pred HHHHHHcCcceeee
Q 020013 181 YVAALSLGAQGICL 194 (332)
Q Consensus 181 v~~al~~GA~gV~~ 194 (332)
+.+++.+||+++..
T Consensus 110 ~~~~~~~ga~~~l~ 123 (146)
T 4dad_A 110 LLDAMRAGVRDVLR 123 (146)
T ss_dssp HHHHHTTTEEEEEE
T ss_pred HHHHHHhCCceeEc
Confidence 99999999998753
No 388
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=91.34 E-value=1.7 Score=33.94 Aligned_cols=83 Identities=24% Similarity=0.206 Sum_probs=58.9
Q ss_pred HHHHHhCCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH
Q 020013 103 VLEAHSAGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 103 i~~~~~~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v 181 (332)
.+.+...|..+. .+.+.+++..... ..+|.|++.-.-.+ ...+.++..+++..+ ++|||+-.+-.+.+.+
T Consensus 20 ~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dliild~~l~~------~~g~~~~~~l~~~~~--~~pii~ls~~~~~~~~ 90 (155)
T 1qkk_A 20 QQTLELAGFTVS-SFASATEALAGLSADFAGIVISDIRMPG------MDGLALFRKILALDP--DLPMILVTGHGDIPMA 90 (155)
T ss_dssp HHHHHHTTCEEE-EESCHHHHHHTCCTTCCSEEEEESCCSS------SCHHHHHHHHHHHCT--TSCEEEEECGGGHHHH
T ss_pred HHHHHHcCcEEE-EECCHHHHHHHHHhCCCCEEEEeCCCCC------CCHHHHHHHHHhhCC--CCCEEEEECCCChHHH
Confidence 345566788765 6778888776543 46899998533111 233677777776543 6899998888888889
Q ss_pred HHHHHcCcceeee
Q 020013 182 VAALSLGAQGICL 194 (332)
Q Consensus 182 ~~al~~GA~gV~~ 194 (332)
..++.+|++++..
T Consensus 91 ~~~~~~g~~~~l~ 103 (155)
T 1qkk_A 91 VQAIQDGAYDFIA 103 (155)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHhcCCCeEEe
Confidence 9999999998764
No 389
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=91.33 E-value=1.5 Score=41.86 Aligned_cols=74 Identities=15% Similarity=0.177 Sum_probs=51.2
Q ss_pred CCc-EEEEeecCCCCH---HHHHHHHhcCCcEEEEccCCC-----------------------cHHHHHHHHhC---CCE
Q 020013 63 ERP-FGVGVVLAFPHN---ENIKAILSEKVAVLQVSWGEY-----------------------SEELVLEAHSA---GVK 112 (332)
Q Consensus 63 ~~p-~gvnl~~~~~~~---~~~~~~~~~~~~~I~~~~g~~-----------------------~~~~i~~~~~~---g~~ 112 (332)
+.| +.+.+-.....+ +..+.+.+.|+|.|.++.... ..++++.+++. .++
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 567 788765443322 235667789999998863211 12456666553 688
Q ss_pred EEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 113 VVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 113 v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
|+. .+.|.+++.+++.+|||.|-+
T Consensus 376 VIg~GGI~s~~DA~e~l~aGAd~Vqi 401 (443)
T 1tv5_A 376 IIASGGIFSGLDALEKIEAGASVCQL 401 (443)
T ss_dssp EEEESSCCSHHHHHHHHHTTEEEEEE
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 875 578999999999999999977
No 390
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=91.33 E-value=0.31 Score=44.46 Aligned_cols=76 Identities=14% Similarity=0.212 Sum_probs=48.6
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHH----HHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVA----ALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~----al~~GA~gV~~GT~f 198 (332)
+....+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+.-|- +-+++.+ +-.+|||++++-+.+
T Consensus 39 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~g-rvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~P~ 116 (316)
T 3e96_A 39 VDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHG-RALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHMPI 116 (316)
T ss_dssp HHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC-CCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 445668899999996654333321111224566666666643 6999987664 5555433 345899999999888
Q ss_pred cc
Q 020013 199 VA 200 (332)
Q Consensus 199 l~ 200 (332)
..
T Consensus 117 y~ 118 (316)
T 3e96_A 117 HP 118 (316)
T ss_dssp CS
T ss_pred CC
Confidence 74
No 391
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=91.33 E-value=2.6 Score=32.61 Aligned_cols=81 Identities=16% Similarity=0.099 Sum_probs=57.6
Q ss_pred HHhCC-CEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHH
Q 020013 106 AHSAG-VKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVA 183 (332)
Q Consensus 106 ~~~~g-~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~ 183 (332)
+...+ ...+..+.+.+++.... +..+|.|++.-.- .....+.++..+++... ++|||+-.+-.+.+.+.+
T Consensus 40 L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l------~~~~g~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~~ 111 (150)
T 4e7p_A 40 LTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEM------PVKTGLEVLEWIRSEKL--ETKVVVVTTFKRAGYFER 111 (150)
T ss_dssp HHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSC------SSSCHHHHHHHHHHTTC--SCEEEEEESCCCHHHHHH
T ss_pred HHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCC------CCCcHHHHHHHHHHhCC--CCeEEEEeCCCCHHHHHH
Confidence 34443 34556678888887665 4569999985321 11234678888877543 689998888889999999
Q ss_pred HHHcCcceeee
Q 020013 184 ALSLGAQGICL 194 (332)
Q Consensus 184 al~~GA~gV~~ 194 (332)
++.+||+++..
T Consensus 112 ~~~~g~~~~l~ 122 (150)
T 4e7p_A 112 AVKAGVDAYVL 122 (150)
T ss_dssp HHHTTCSEEEE
T ss_pred HHHCCCcEEEe
Confidence 99999998774
No 392
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=91.31 E-value=2.1 Score=33.47 Aligned_cols=85 Identities=21% Similarity=0.137 Sum_probs=59.2
Q ss_pred HHHHHhCCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH
Q 020013 103 VLEAHSAGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 103 i~~~~~~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v 181 (332)
.+.+++.|..+ ..+.+.+++..... ..+|.|++.-.-.+ ...+.++..+++.....++|||+-.+-.+.+.+
T Consensus 24 ~~~L~~~g~~v-~~~~~~~~al~~l~~~~~dlii~D~~l~~------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~ 96 (154)
T 3gt7_A 24 KHILEETGYQT-EHVRNGREAVRFLSLTRPDLIISDVLMPE------MDGYALCRWLKGQPDLRTIPVILLTILSDPRDV 96 (154)
T ss_dssp HHHHHTTTCEE-EEESSHHHHHHHHTTCCCSEEEEESCCSS------SCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHH
T ss_pred HHHHHHCCCEE-EEeCCHHHHHHHHHhCCCCEEEEeCCCCC------CCHHHHHHHHHhCCCcCCCCEEEEECCCChHHH
Confidence 34455667765 45778888877654 56999998532111 233677777776421126899998888899999
Q ss_pred HHHHHcCcceeee
Q 020013 182 VAALSLGAQGICL 194 (332)
Q Consensus 182 ~~al~~GA~gV~~ 194 (332)
.+++.+||+++..
T Consensus 97 ~~~~~~g~~~~l~ 109 (154)
T 3gt7_A 97 VRSLECGADDFIT 109 (154)
T ss_dssp HHHHHHCCSEEEE
T ss_pred HHHHHCCCCEEEe
Confidence 9999999998764
No 393
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=91.29 E-value=0.42 Score=43.00 Aligned_cols=79 Identities=15% Similarity=0.272 Sum_probs=49.1
Q ss_pred HHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe-ecCcCCHHHHH---HHHHcCcceeeeccc
Q 020013 122 EARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA-AGGIVDARGYV---AALSLGAQGICLGTR 197 (332)
Q Consensus 122 ~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia-aGGI~~~~~v~---~al~~GA~gV~~GT~ 197 (332)
.++...+.|+|+|++-|..+-++......-..++..+++...+ ++|||+ .|+.++.+.+. .+-.+|||++++-+.
T Consensus 26 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 26 LVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG-RVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3455678899999996664433321222234556666666643 689875 44554444332 344589999999999
Q ss_pred cccC
Q 020013 198 FVAS 201 (332)
Q Consensus 198 fl~t 201 (332)
+...
T Consensus 105 ~y~~ 108 (292)
T 2vc6_A 105 YYNK 108 (292)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8754
No 394
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=91.24 E-value=5.7 Score=38.10 Aligned_cols=110 Identities=19% Similarity=0.223 Sum_probs=71.2
Q ss_pred cHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhc-CCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc-------
Q 020013 24 GPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW------- 95 (332)
Q Consensus 24 ~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~-~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~------- 95 (332)
..+.+..+.++|.-.++........+...+.++++++.. +.|+..+-+. ..+....+.+.|++.|.++.
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~---t~~~a~~~~~~Gad~I~vg~g~g~~~~ 310 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIA---TAEGARALYDAGVDVVKVGIGPGSICT 310 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEEC---SHHHHHHHHHTTCSEEEECSSCCTTBC
T ss_pred HHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCcc---CHHHHHHHHHcCCCEEEECccCCcceE
Confidence 356677777777544432211123344556777777765 6776654333 24667778899999997763
Q ss_pred -------CCCcHHHHHHH----HhCCCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 96 -------GEYSEELVLEA----HSAGVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 96 -------g~~~~~~i~~~----~~~g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
+.+..+.+..+ ++.+++++. .+.+..++.++...|+|++.+
T Consensus 311 tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~v 364 (491)
T 1zfj_A 311 TRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVML 364 (491)
T ss_dssp HHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred EeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceee
Confidence 22222333333 346889886 578999999999999999998
No 395
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=91.17 E-value=6.2 Score=34.14 Aligned_cols=83 Identities=16% Similarity=0.094 Sum_probs=56.7
Q ss_pred HHHhCCCEEEEecCCHHHHHHHHHcC--CCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 105 EAHSAGVKVVPQVGSFDEARKAVNAG--VDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 105 ~~~~~g~~v~~~v~s~~~a~~a~~~g--~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
.++..|..+ ..+.+.+++....+.. +|.|++.=.- .....+.+++++++.....++|||+..+-.+.....
T Consensus 143 ~L~~~~~~v-~~a~~~~eal~~l~~~~~~dlvllD~~m------P~~dG~~l~~~lr~~~~~~~~~ii~~s~~~~~~~~~ 215 (259)
T 3luf_A 143 QLRKQLLQV-HEASHAREALATLEQHPAIRLVLVDYYM------PEIDGISLVRMLRERYSKQQLAIIGISVSDKRGLSA 215 (259)
T ss_dssp HHHTTTCEE-EEESSHHHHHHHHHHCTTEEEEEECSCC------SSSCHHHHHHHHHHHCCTTTSEEEEEECSSSSSHHH
T ss_pred HHHHcCcEE-EEeCCHHHHHHHHhcCCCCCEEEEcCCC------CCCCHHHHHHHHHhccCCCCCeEEEEEccCCHHHHH
Confidence 344556554 4678888888776543 6888874221 112347788888875433368999888877888889
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
+++.+||++...
T Consensus 216 ~a~~~Ga~~yl~ 227 (259)
T 3luf_A 216 RYLKQGANDFLN 227 (259)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHhcChhheEc
Confidence 999999998753
No 396
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=91.13 E-value=1 Score=41.66 Aligned_cols=90 Identities=18% Similarity=0.139 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHH---HHHHHhcC-CcEEEEc------------c---------------
Q 020013 47 APDYLRDLIRKTRSLTERPFGVGVVLAFPHNEN---IKAILSEK-VAVLQVS------------W--------------- 95 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~---~~~~~~~~-~~~I~~~------------~--------------- 95 (332)
+++.+.++++.+++.+++|+.|.+-......+. ++.+.+.+ +|.|.++ .
T Consensus 177 ~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlS 256 (354)
T 4ef8_A 177 DFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLG 256 (354)
T ss_dssp SHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEE
T ss_pred CHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCC
Confidence 678899999999998899999988765432222 33344677 8888641 0
Q ss_pred CCC--c--HHHHHHHHhC--CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 96 GEY--S--EELVLEAHSA--GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 96 g~~--~--~~~i~~~~~~--g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
|.+ | .+++.++++. .++|+. .+.+.+++.+++.+|+|.|-+
T Consensus 257 G~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~v 305 (354)
T 4ef8_A 257 GRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQV 305 (354)
T ss_dssp GGGGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEE
T ss_pred CCCCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 000 1 2456666654 478875 478999999999999999987
No 397
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=91.08 E-value=2 Score=32.62 Aligned_cols=81 Identities=16% Similarity=0.120 Sum_probs=56.1
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.+++.+..+ ..+.+.+++.... +..+|.|++.-.-. ....+.++..+++... .+|||+-.+-.+.+.+.
T Consensus 25 ~~L~~~~~~v-~~~~~~~~a~~~l~~~~~dlvi~d~~l~------~~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~ 95 (137)
T 3hdg_A 25 TIISNHFPEV-WSAGDGEEGERLFGLHAPDVIITDIRMP------KLGGLEMLDRIKAGGA--KPYVIVISAFSEMKYFI 95 (137)
T ss_dssp HHHHTTCSCE-EEESSHHHHHHHHHHHCCSEEEECSSCS------SSCHHHHHHHHHHTTC--CCEEEECCCCCCHHHHH
T ss_pred HHHHhcCcEE-EEECCHHHHHHHHhccCCCEEEEeCCCC------CCCHHHHHHHHHhcCC--CCcEEEEecCcChHHHH
Confidence 3344444443 4567777776554 45799999853211 1234677888876543 68999999988989999
Q ss_pred HHHHcCcceee
Q 020013 183 AALSLGAQGIC 193 (332)
Q Consensus 183 ~al~~GA~gV~ 193 (332)
+++.+|++++.
T Consensus 96 ~~~~~g~~~~l 106 (137)
T 3hdg_A 96 KAIELGVHLFL 106 (137)
T ss_dssp HHHHHCCSEEC
T ss_pred HHHhCCcceeE
Confidence 99999999865
No 398
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=91.03 E-value=2.8 Score=32.61 Aligned_cols=82 Identities=13% Similarity=-0.008 Sum_probs=58.3
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.+++.|..+. .+.+.+++.... +..+|.|++.-.-.+ ...+.++..+++... ++|||+-.+-.+.+.+.
T Consensus 32 ~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~------~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~ 102 (153)
T 3hv2_A 32 QLLSPLPYTLH-FARDATQALQLLASREVDLVISAAHLPQ------MDGPTLLARIHQQYP--STTRILLTGDPDLKLIA 102 (153)
T ss_dssp HHHTTSSCEEE-EESSHHHHHHHHHHSCCSEEEEESCCSS------SCHHHHHHHHHHHCT--TSEEEEECCCCCHHHHH
T ss_pred HHhcccCcEEE-EECCHHHHHHHHHcCCCCEEEEeCCCCc------CcHHHHHHHHHhHCC--CCeEEEEECCCCHHHHH
Confidence 34455676655 677888877654 557999998533111 234677888877543 68999999888999999
Q ss_pred HHHHcC-cceeee
Q 020013 183 AALSLG-AQGICL 194 (332)
Q Consensus 183 ~al~~G-A~gV~~ 194 (332)
+++..| |+++..
T Consensus 103 ~~~~~g~~~~~l~ 115 (153)
T 3hv2_A 103 KAINEGEIYRYLS 115 (153)
T ss_dssp HHHHTTCCSEEEC
T ss_pred HHHhCCCcceEEe
Confidence 999999 888753
No 399
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=90.94 E-value=2.5 Score=38.84 Aligned_cols=107 Identities=11% Similarity=0.063 Sum_probs=73.6
Q ss_pred HHHHHhcCCcEEEEccCC-CcH---HHHHHHHh---CCCEEEEecC---CHHHHHH----HHHcCCCEEEEecCCCCccc
Q 020013 80 IKAILSEKVAVLQVSWGE-YSE---ELVLEAHS---AGVKVVPQVG---SFDEARK----AVNAGVDAIIVQGREAGGHV 145 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~-~~~---~~i~~~~~---~g~~v~~~v~---s~~~a~~----a~~~g~D~ivv~G~eaGGh~ 145 (332)
+..+.+.|.+.|-++.|. .+. +.++.+++ .++++...++ +.+++.. ..+.|+++| +-+
T Consensus 152 a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--E~P------ 223 (359)
T 1mdl_A 152 AVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWI--EEP------ 223 (359)
T ss_dssp HHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCE--ECC------
T ss_pred HHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeE--ECC------
Confidence 344556799999998775 333 44555555 3677877765 5666543 456688876 222
Q ss_pred CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeecccc
Q 020013 146 IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRF 198 (332)
Q Consensus 146 ~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~GT~f 198 (332)
-....+..+.++++.+ ++||++.+.+.+.+++.+++..| +|.|++....
T Consensus 224 -~~~~~~~~~~~l~~~~---~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~ 273 (359)
T 1mdl_A 224 -TLQHDYEGHQRIQSKL---NVPVQMGENWLGPEEMFKALSIGACRLAMPDAMK 273 (359)
T ss_dssp -SCTTCHHHHHHHHHTC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTT
T ss_pred -CChhhHHHHHHHHHhC---CCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchh
Confidence 0113466677777766 79999999999999999999887 6888875443
No 400
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=90.94 E-value=3.6 Score=39.46 Aligned_cols=112 Identities=13% Similarity=0.200 Sum_probs=75.5
Q ss_pred HHHHHHHHhcCCcEEEEccCC-Cc---HHHHHHHHhCCCEEEEec-------CCHH----HHHHHHHcCCCEEEEecCCC
Q 020013 77 NENIKAILSEKVAVLQVSWGE-YS---EELVLEAHSAGVKVVPQV-------GSFD----EARKAVNAGVDAIIVQGREA 141 (332)
Q Consensus 77 ~~~~~~~~~~~~~~I~~~~g~-~~---~~~i~~~~~~g~~v~~~v-------~s~~----~a~~a~~~g~D~ivv~G~ea 141 (332)
...++.+.+.+++.|.+.... +. .+.++.+++.|..+...+ .+++ -++.+.+.|+|.|.+--.-
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~- 181 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMA- 181 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETT-
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCC-
Confidence 345778889999999875322 12 245677788999875443 1443 4566788999999884432
Q ss_pred CcccCCCCchhhhHHHHHHHhCCCCCcEEee----cCcCCHHHHHHHHHcCcceeeec
Q 020013 142 GGHVIGQDGLISLLPMVVDLIGDRDIPIIAA----GGIVDARGYVAALSLGAQGICLG 195 (332)
Q Consensus 142 GGh~~~~~~~~~ll~~i~~~~~~~~iPviaa----GGI~~~~~v~~al~~GA~gV~~G 195 (332)
|.. .+.....++..+++.+ ++||-.- .|.+ -.+..+++.+||+.|..-
T Consensus 182 -G~~-~P~~v~~lv~~l~~~~---~~~i~~H~Hnd~GlA-vAN~laAv~AGa~~VD~t 233 (464)
T 2nx9_A 182 -GIL-TPYAAEELVSTLKKQV---DVELHLHCHSTAGLA-DMTLLKAIEAGVDRVDTA 233 (464)
T ss_dssp -SCC-CHHHHHHHHHHHHHHC---CSCEEEEECCTTSCH-HHHHHHHHHTTCSEEEEB
T ss_pred -CCc-CHHHHHHHHHHHHHhc---CCeEEEEECCCCChH-HHHHHHHHHhCCCEEEEe
Confidence 221 2334567788888776 6787665 6774 577888899999987653
No 401
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=90.93 E-value=1.9 Score=33.15 Aligned_cols=87 Identities=18% Similarity=0.204 Sum_probs=59.5
Q ss_pred HHHHHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHH
Q 020013 101 ELVLEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDAR 179 (332)
Q Consensus 101 ~~i~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~ 179 (332)
.+.+.+...|..+. .+.+.+++.... +..+|.|++.-.-. ....+.++..+++.....++|||+-.+-.+.+
T Consensus 23 ~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlii~d~~l~------~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~ 95 (147)
T 2zay_A 23 ASISALSQEGFDII-QCGNAIEAVPVAVKTHPHLIITEANMP------KISGMDLFNSLKKNPQTASIPVIALSGRATAK 95 (147)
T ss_dssp HHHHHHHHHTEEEE-EESSHHHHHHHHHHHCCSEEEEESCCS------SSCHHHHHHHHHTSTTTTTSCEEEEESSCCHH
T ss_pred HHHHHHHHcCCeEE-EeCCHHHHHHHHHcCCCCEEEEcCCCC------CCCHHHHHHHHHcCcccCCCCEEEEeCCCCHH
Confidence 34445556677665 677887776654 45799999853211 12336778887762111268999988888889
Q ss_pred HHHHHHHcCcceeee
Q 020013 180 GYVAALSLGAQGICL 194 (332)
Q Consensus 180 ~v~~al~~GA~gV~~ 194 (332)
....++.+|++++..
T Consensus 96 ~~~~~~~~g~~~~l~ 110 (147)
T 2zay_A 96 EEAQLLDMGFIDFIA 110 (147)
T ss_dssp HHHHHHHHTCSEEEE
T ss_pred HHHHHHhCCCCEEEe
Confidence 999999999998764
No 402
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=90.88 E-value=1.2 Score=40.71 Aligned_cols=85 Identities=21% Similarity=0.158 Sum_probs=58.9
Q ss_pred HHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEE--ccCC------------------------CcHHHHH
Q 020013 51 LRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQV--SWGE------------------------YSEELVL 104 (332)
Q Consensus 51 ~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~--~~g~------------------------~~~~~i~ 104 (332)
+.+.++++++ ++.|+.+..+......+....+.+.|+|+|.+ +.|. +..+.+.
T Consensus 170 ~~~~i~~vr~-~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 248 (332)
T 1vcf_A 170 LVERLAELLP-LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAIL 248 (332)
T ss_dssp HHHHHHHHCS-CSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHH
T ss_pred HHHHHHHHHc-CCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHH
Confidence 4567888988 88999987432212345677788899999988 3221 1112334
Q ss_pred HHHh-C-CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 105 EAHS-A-GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 105 ~~~~-~-g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
.+++ . +++|+. .+.+.+++.+++..|||+|.+
T Consensus 249 ~v~~~~~~ipvia~GGI~~~~d~~kal~~GAd~V~i 284 (332)
T 1vcf_A 249 EVREVLPHLPLVASGGVYTGTDGAKALALGADLLAV 284 (332)
T ss_dssp HHHHHCSSSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCCeEEEECCCCCHHHHHHHHHhCCChHhh
Confidence 4433 3 577775 578999999999999999988
No 403
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=90.82 E-value=1.4 Score=39.50 Aligned_cols=90 Identities=17% Similarity=0.047 Sum_probs=59.2
Q ss_pred HHHHHhC-CCEEEEecCCHHHHHHHHHcCCCEEEEecCCC----CcccCC-CCchhh---hHHHHHHHhCCCCCcEEeec
Q 020013 103 VLEAHSA-GVKVVPQVGSFDEARKAVNAGVDAIIVQGREA----GGHVIG-QDGLIS---LLPMVVDLIGDRDIPIIAAG 173 (332)
Q Consensus 103 i~~~~~~-g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~ea----GGh~~~-~~~~~~---ll~~i~~~~~~~~iPviaaG 173 (332)
++.+++. ...+++.+.+.-.|+.+.++|.|+|.+.+... =|+.+. ..+.-. .+..|.+.. ++||++..
T Consensus 13 lr~l~~~~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~---~~PviaD~ 89 (287)
T 3b8i_A 13 FRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVA---RLPVIADA 89 (287)
T ss_dssp HHHHHHSSCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTC---SSCEEEEC
T ss_pred HHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcC---CCCEEEEC
Confidence 4455554 46677899999999999999999999976622 244432 222222 333444433 78999864
Q ss_pred C--cCCHHH----HHHHHHcCcceeeec
Q 020013 174 G--IVDARG----YVAALSLGAQGICLG 195 (332)
Q Consensus 174 G--I~~~~~----v~~al~~GA~gV~~G 195 (332)
- -+++.+ +..++++||+||.+=
T Consensus 90 d~Gyg~~~~~~~~v~~l~~aGa~gv~iE 117 (287)
T 3b8i_A 90 DHGYGNALNVMRTVVELERAGIAALTIE 117 (287)
T ss_dssp TTCSSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCeEEEEc
Confidence 3 446554 556777999999983
No 404
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=90.74 E-value=0.45 Score=43.31 Aligned_cols=77 Identities=13% Similarity=0.183 Sum_probs=48.0
Q ss_pred HHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe-ecCcCCHHHHH---HHHHcCcceeeecccc
Q 020013 123 ARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA-AGGIVDARGYV---AALSLGAQGICLGTRF 198 (332)
Q Consensus 123 a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia-aGGI~~~~~v~---~al~~GA~gV~~GT~f 198 (332)
+....+.|+|+|++-|..+-+.......-..++..+++...+ ++|||+ .|+ ++.+.+. .+-++|||++++-+.+
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpViaGvg~-st~~ai~la~~A~~~Gadavlv~~P~ 116 (314)
T 3d0c_A 39 VEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG-RATVVAGIGY-SVDTAIELGKSAIDSGADCVMIHQPV 116 (314)
T ss_dssp HHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC-CCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 445667899999986654333321112234566666766643 689885 444 4444432 3345899999999998
Q ss_pred ccC
Q 020013 199 VAS 201 (332)
Q Consensus 199 l~t 201 (332)
...
T Consensus 117 y~~ 119 (314)
T 3d0c_A 117 HPY 119 (314)
T ss_dssp CSC
T ss_pred CCC
Confidence 754
No 405
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=90.74 E-value=1.8 Score=39.91 Aligned_cols=74 Identities=18% Similarity=0.152 Sum_probs=58.8
Q ss_pred HHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHH
Q 020013 101 ELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG 180 (332)
Q Consensus 101 ~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~ 180 (332)
.+.+.+++.|+.++..+-+.+.+....+.++|++-+-. +....+.||+.+.+. +.|||..=|.+|-+.
T Consensus 82 ~L~~~~~~~Gi~~~st~fD~~svd~l~~~~v~~~KI~S--------~~~~N~pLL~~va~~----gKPviLstGmstl~E 149 (350)
T 3g8r_A 82 KLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKIAS--------CSFTDWPLLERIARS----DKPVVASTAGARRED 149 (350)
T ss_dssp HHHHHHHHTTCEEEEEECSHHHHHHHHHTTCCEEEECS--------SSTTCHHHHHHHHTS----CSCEEEECTTCCHHH
T ss_pred HHHHHHHHcCCcEEeccCCHHHHHHHHHcCCCEEEECc--------ccccCHHHHHHHHhh----CCcEEEECCCCCHHH
Confidence 34455677899999999999999999999999999811 223447788887652 789999999999999
Q ss_pred HHHHHH
Q 020013 181 YVAALS 186 (332)
Q Consensus 181 v~~al~ 186 (332)
+..+..
T Consensus 150 i~~Ave 155 (350)
T 3g8r_A 150 IDKVVS 155 (350)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 406
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=90.68 E-value=1 Score=42.57 Aligned_cols=90 Identities=13% Similarity=0.182 Sum_probs=63.3
Q ss_pred CHHHHHHHHHHHHhh--------------------cCCc-EEEEeecCCCC---HHHHHHHHhcCCcEEEEccCC-----
Q 020013 47 APDYLRDLIRKTRSL--------------------TERP-FGVGVVLAFPH---NENIKAILSEKVAVLQVSWGE----- 97 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~--------------------~~~p-~gvnl~~~~~~---~~~~~~~~~~~~~~I~~~~g~----- 97 (332)
+++.+.++++.+++. .++| +.|.+-.+..+ .+..+.+.+.|+|.|.++-..
T Consensus 232 ~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~d 311 (415)
T 3i65_A 232 EAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQIND 311 (415)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCC
T ss_pred CHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCccccc
Confidence 567788888887764 2578 78887765442 234566778899999876210
Q ss_pred -------------Cc-----HHHHHHHHhC---CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 98 -------------YS-----EELVLEAHSA---GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 98 -------------~~-----~~~i~~~~~~---g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
++ .+++..+++. .++|+. .+.|.+++.+++.+|+|+|.+
T Consensus 312 l~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqI 373 (415)
T 3i65_A 312 IKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQL 373 (415)
T ss_dssp CGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEE
T ss_pred ccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 00 1456666553 477775 478999999999999999987
No 407
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=90.64 E-value=1.4 Score=40.00 Aligned_cols=90 Identities=17% Similarity=0.111 Sum_probs=60.0
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCC----cccCCC-Cch---hhhHHHHHHHhCCCCCcEEeecC-
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAG----GHVIGQ-DGL---ISLLPMVVDLIGDRDIPIIAAGG- 174 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaG----Gh~~~~-~~~---~~ll~~i~~~~~~~~iPviaaGG- 174 (332)
+..+.....+++.+.+.-.|+.+.++|.|+|.+.|...+ |+.+.. .+. ...++.|.+..+ ++||++..-
T Consensus 33 ~l~~~~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~--~~PviaD~d~ 110 (318)
T 1zlp_A 33 RLIEEHGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAP--NLCVVVDGDT 110 (318)
T ss_dssp HHHHHSSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSS--SSEEEEECTT
T ss_pred HHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhcc--CCCEEEeCCC
Confidence 333345677889999999999999999999999774222 444322 222 333445555543 699998753
Q ss_pred -cCCHH----HHHHHHHcCcceeeec
Q 020013 175 -IVDAR----GYVAALSLGAQGICLG 195 (332)
Q Consensus 175 -I~~~~----~v~~al~~GA~gV~~G 195 (332)
-+++. ++..++++||+||.+=
T Consensus 111 Gyg~~~~v~~tv~~l~~aGaagv~iE 136 (318)
T 1zlp_A 111 GGGGPLNVQRFIRELISAGAKGVFLE 136 (318)
T ss_dssp CSSSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 33544 4566778999999883
No 408
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=90.61 E-value=2 Score=32.61 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=58.3
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.++..|..+. .+.+.+++.... +..+|.|++.-.-.++.. .....+.++..+++... ++|||+-.+-.+.+.+.
T Consensus 21 ~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~-~~~~g~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~ 96 (140)
T 2qr3_A 21 LLLKNHFSKVI-TLSSPVSLSTVLREENPEVVLLDMNFTSGIN-NGNEGLFWLHEIKRQYR--DLPVVLFTAYADIDLAV 96 (140)
T ss_dssp HHHTTTSSEEE-EECCHHHHHHHHHHSCEEEEEEETTTTC------CCHHHHHHHHHHHCT--TCCEEEEEEGGGHHHHH
T ss_pred HHHHhCCcEEE-EeCCHHHHHHHHHcCCCCEEEEeCCcCCCCC-CCccHHHHHHHHHhhCc--CCCEEEEECCCCHHHHH
Confidence 34445677665 677888777655 456899998643221110 01234677778777543 68999888887888899
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++.+|++++..
T Consensus 97 ~~~~~g~~~~l~ 108 (140)
T 2qr3_A 97 RGIKEGASDFVV 108 (140)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHcCchheee
Confidence 999999998764
No 409
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=90.58 E-value=1.8 Score=33.11 Aligned_cols=85 Identities=11% Similarity=0.017 Sum_probs=57.8
Q ss_pred HHHHhCCCE-EEEecCCHHHHHHHHH-----------cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe
Q 020013 104 LEAHSAGVK-VVPQVGSFDEARKAVN-----------AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA 171 (332)
Q Consensus 104 ~~~~~~g~~-v~~~v~s~~~a~~a~~-----------~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia 171 (332)
+.++..|.. .+..+.+.+++..... ..+|.|++.-.-. ....+.++..+++.....++|||+
T Consensus 24 ~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~------~~~g~~~~~~l~~~~~~~~~~ii~ 97 (149)
T 1k66_A 24 RLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLP------GTDGREVLQEIKQDEVLKKIPVVI 97 (149)
T ss_dssp HHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCS------SSCHHHHHHHHTTSTTGGGSCEEE
T ss_pred HHHHHcCCCceEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCC------CCCHHHHHHHHHhCcccCCCeEEE
Confidence 445556652 3456788888887765 5789999853211 123366777776542102689998
Q ss_pred ecCcCCHHHHHHHHHcCcceeee
Q 020013 172 AGGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 172 aGGI~~~~~v~~al~~GA~gV~~ 194 (332)
-.+-.+.+.+..++..|++++..
T Consensus 98 ~t~~~~~~~~~~~~~~g~~~~l~ 120 (149)
T 1k66_A 98 MTTSSNPKDIEICYSYSISSYIV 120 (149)
T ss_dssp EESCCCHHHHHHHHHTTCSEEEE
T ss_pred EeCCCCHHHHHHHHHCCCCEEEe
Confidence 88888889999999999998764
No 410
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=90.49 E-value=2 Score=34.82 Aligned_cols=81 Identities=27% Similarity=0.343 Sum_probs=48.2
Q ss_pred HHHhCCCEEEE--ecCCHHHH-HHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCC---CCCcEEeecCcCCH
Q 020013 105 EAHSAGVKVVP--QVGSFDEA-RKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGD---RDIPIIAAGGIVDA 178 (332)
Q Consensus 105 ~~~~~g~~v~~--~v~s~~~a-~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~---~~iPviaaGGI~~~ 178 (332)
.++..|..|+. .-.++++. ..+.+.++|+|.+.... + ..+..++++.+.++. .++||++.|-+ ..
T Consensus 41 ~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~-~-------~~~~~~~~~i~~L~~~g~~~i~v~vGG~~-~~ 111 (161)
T 2yxb_A 41 ALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILN-G-------AHLHLMKRLMAKLRELGADDIPVVLGGTI-PI 111 (161)
T ss_dssp HHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESS-S-------CHHHHHHHHHHHHHHTTCTTSCEEEEECC-CH
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeec-h-------hhHHHHHHHHHHHHhcCCCCCEEEEeCCC-ch
Confidence 34566777662 12244443 45567899999885442 1 223344444433321 25888887776 56
Q ss_pred HHHHHHHHcCcceeee
Q 020013 179 RGYVAALSLGAQGICL 194 (332)
Q Consensus 179 ~~v~~al~~GA~gV~~ 194 (332)
++...+-..|+|++..
T Consensus 112 ~~~~~l~~~G~d~v~~ 127 (161)
T 2yxb_A 112 PDLEPLRSLGIREIFL 127 (161)
T ss_dssp HHHHHHHHTTCCEEEC
T ss_pred hcHHHHHHCCCcEEEC
Confidence 7776677899998763
No 411
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=90.46 E-value=1.1 Score=39.10 Aligned_cols=57 Identities=28% Similarity=0.365 Sum_probs=46.4
Q ss_pred HHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEE-ecCCHHHHHHHHHcCCCEEEE
Q 020013 80 IKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVP-QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~-~v~s~~~a~~a~~~g~D~ivv 136 (332)
.+.+.+.+++.+........+++++.+++.|++|.. ++.+.++.+.+.+.|+|+|+.
T Consensus 181 ~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~v~~wTvn~~~~~~~l~~~GvdgIiT 238 (252)
T 2pz0_A 181 WHMALRMEAYSLHPFYFNIIPELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVDGIIT 238 (252)
T ss_dssp HHHHHHTTCSEEEEBGGGCCHHHHHHHHHTTCEECCBCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHcCCeEEecchhcCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHcCCCEEEc
Confidence 345566788888886555567899999999999875 577899999999999999987
No 412
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=90.45 E-value=2 Score=41.82 Aligned_cols=81 Identities=19% Similarity=0.150 Sum_probs=57.7
Q ss_pred HHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc--cCC-----Cc-HHHHHH----HHh----CCCEEEE-
Q 020013 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS--WGE-----YS-EELVLE----AHS----AGVKVVP- 115 (332)
Q Consensus 53 ~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~--~g~-----~~-~~~i~~----~~~----~g~~v~~- 115 (332)
+.++.+|+.++.|+.+..+.. .+....+.+.|+|+|.++ .|. .+ .+.+.. +++ ..++|+.
T Consensus 333 ~~i~~lr~~~~~PvivKgv~~---~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~ 409 (511)
T 1kbi_A 333 KDIEELKKKTKLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD 409 (511)
T ss_dssp HHHHHHHHHCSSCEEEEEECS---HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE
T ss_pred HHHHHHHHHhCCcEEEEeCCC---HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE
Confidence 457888888889998875442 456778889999999983 331 11 123333 321 2578885
Q ss_pred -ecCCHHHHHHHHHcCCCEEEE
Q 020013 116 -QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 116 -~v~s~~~a~~a~~~g~D~ivv 136 (332)
.+.+..++.+++..|||+|.+
T Consensus 410 GGI~~g~Dv~kaLalGAdaV~i 431 (511)
T 1kbi_A 410 GGVRRGTDVLKALCLGAKGVGL 431 (511)
T ss_dssp SSCCSHHHHHHHHHHTCSEEEE
T ss_pred CCCCCHHHHHHHHHcCCCEEEE
Confidence 477999999999999999988
No 413
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=90.45 E-value=4.3 Score=38.28 Aligned_cols=176 Identities=14% Similarity=0.113 Sum_probs=109.9
Q ss_pred CCCcHHHHHHHHhCC---Cceeec-----C----CCCCC--HHHHHHHHHHHHhhcCCc---EEEEeecCCCC-------
Q 020013 21 DISGPELVAAVANAG---GLGLLR-----A----PDWEA--PDYLRDLIRKTRSLTERP---FGVGVVLAFPH------- 76 (332)
Q Consensus 21 g~s~~~la~avs~aG---glG~i~-----~----~~~~~--~e~~~~~i~~~r~~~~~p---~gvnl~~~~~~------- 76 (332)
...+++.+.++-++. ...+|- . ++|.. ++.+...+..+.+..+.| +.+++=--.+.
T Consensus 20 n~~n~e~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w~~~~~ 99 (420)
T 2fiq_A 20 CSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDHLGPNCWQQENV 99 (420)
T ss_dssp CCCCHHHHHHHHHHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGGTTSBH
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCCCCCccccccch
Confidence 456888888877653 334441 0 12444 788888887776555666 77765221111
Q ss_pred -------HHHHHHHHhcCCcEEEEccCC-----C---cHHH--------HHHHHhC-------------CCE--------
Q 020013 77 -------NENIKAILSEKVAVLQVSWGE-----Y---SEEL--------VLEAHSA-------------GVK-------- 112 (332)
Q Consensus 77 -------~~~~~~~~~~~~~~I~~~~g~-----~---~~~~--------i~~~~~~-------------g~~-------- 112 (332)
.+.+..+++.|..-|.+.... + ..++ ++.+++. |..
T Consensus 100 ~~am~~a~e~i~~aI~aGFtSVMiD~S~~~~~~~~pl~eNi~~~rt~elv~~Ah~~~~~~~eaElG~vgG~Ev~v~~~~~ 179 (420)
T 2fiq_A 100 DAAMEKSVELVKAYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVPVPGGEA 179 (420)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCCSCCBTCCSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEECSSCC-----
T ss_pred hhhhhhHHHHHHHHHHhCCCEEEECCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHcccCCcccceEEeeeecCCCCCcc
Confidence 156778889999999886332 1 2232 3444442 111
Q ss_pred E-E--EecCCHHHHHHHH--------HcCCCE-------EEEe-cCCCCcccCCCCchhhhHHHHHHHhCCCCCc-EEe-
Q 020013 113 V-V--PQVGSFDEARKAV--------NAGVDA-------IIVQ-GREAGGHVIGQDGLISLLPMVVDLIGDRDIP-IIA- 171 (332)
Q Consensus 113 v-~--~~v~s~~~a~~a~--------~~g~D~-------ivv~-G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iP-via- 171 (332)
. . ...+++++|+... +.|+|. +.++ |.+-|-. ..+.-.+..+.++.+.+ ++| ++.
T Consensus 180 ~~~~~~~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y-~~~~ld~e~l~~I~~~v---~~P~LVle 255 (420)
T 2fiq_A 180 SAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHS-NIIHYQPQEAQALAQWI---ENTRMVYE 255 (420)
T ss_dssp -----CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSS-CEECCCGGGGHHHHHHH---TTSSCEEE
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCC-CCCCcCHHHHHHHHHhc---CCCCEEEe
Confidence 0 1 1157899998866 479998 6653 4332222 11223478889999888 679 777
Q ss_pred ---ecCcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 172 ---AGGIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 172 ---aGGI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
+.|+ +.+++.+++.+|..-+=+||.+-..
T Consensus 256 ~HGgSg~-~~e~l~~~v~~Gi~kiNV~t~l~~a 287 (420)
T 2fiq_A 256 AHSTDYQ-TRTAYWELVRDHFAILKVGPALTFA 287 (420)
T ss_dssp ESCCTTC-CHHHHHHHHHTTEEEEEECHHHHHH
T ss_pred cCCCCCC-CHHHHHHHHHcCCCEEEECHHHHHH
Confidence 4467 6788999999999999999986544
No 414
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=90.44 E-value=3.6 Score=36.24 Aligned_cols=188 Identities=14% Similarity=0.100 Sum_probs=104.2
Q ss_pred cchhhcCCccceecCCCCCCC-CcHHHHHHHHhCCCceeec-CCC-CCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHH
Q 020013 2 GWRGMLGFEYGIVQAPLGPDI-SGPELVAAVANAGGLGLLR-APD-WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNE 78 (332)
Q Consensus 2 ~~~~~l~~~~Pii~apM~~g~-s~~~la~avs~aGglG~i~-~~~-~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~ 78 (332)
.|.+.|.-..|++..=+ .. ++|+.+..+..+|.=-++- ... ..+.+.+...+...+. ...+.-|-+ +..+..
T Consensus 5 ~~k~~l~~g~~~~g~~~--~~~~~p~~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~-~~~~~~VRV--n~~~~~ 79 (261)
T 3qz6_A 5 FLKKKLSAGKSVVGTML--NLVYNPDIVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKN-AGVSVLVRI--PQVDRA 79 (261)
T ss_dssp CHHHHHHTTCCEEEEEE--SSCCCTTHHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHH-HTCEEEEEC--SSCCHH
T ss_pred HHHHHHHCCCCEEEEEE--ecCCCHHHHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhh-cCCeEEEEe--CCCCHH
Confidence 45555554567763333 34 7788888887777533331 221 1244555555555442 233333332 333445
Q ss_pred HHHHHHhcCCcEEEEccCCCcHHH---HHHHH-----------------------------hCCCEEEEecCCHHHHHHH
Q 020013 79 NIKAILSEKVAVLQVSWGEYSEEL---VLEAH-----------------------------SAGVKVVPQVGSFDEARKA 126 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~g~~~~~~---i~~~~-----------------------------~~g~~v~~~v~s~~~a~~a 126 (332)
.++.+++.|++.|.+..=..+.+. ++.++ ...++++..+-+++-...+
T Consensus 80 di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~~ 159 (261)
T 3qz6_A 80 HVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDI 159 (261)
T ss_dssp HHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHTH
T ss_pred HHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHHH
Confidence 688888999999998753323322 22221 1246888888887755543
Q ss_pred HH----cCCCEEEEecC----CCCcccCCC--CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH-HHHHHcCcceeeec
Q 020013 127 VN----AGVDAIIVQGR----EAGGHVIGQ--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY-VAALSLGAQGICLG 195 (332)
Q Consensus 127 ~~----~g~D~ivv~G~----eaGGh~~~~--~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v-~~al~~GA~gV~~G 195 (332)
.+ .++|++.+-.. +. |+.... ......+.++..+....++|+-..++ +++.+ ..++.+|.+.+.+|
T Consensus 160 ~eIaa~~~vd~l~iG~~DL~~~l-g~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~~--~~~~~~~~~~~~G~~~~s~~ 236 (261)
T 3qz6_A 160 DSILAVQGVDAVIFGPRDLSNDL-GIIGQTEHPKVYECYEKVYRAADRQGVVKGFFTA--ADAAKMGWAVERGAQMLLWS 236 (261)
T ss_dssp HHHHTSTTCCEEEECHHHHHHHT-TCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEES--SCGGGGHHHHHTTCCEEEEE
T ss_pred HHHhCCCCCCEEEECHHHHHHHh-CCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeC--CHHHHHHHHHHCCCCEEEEh
Confidence 22 47999988221 11 221111 12233444444433222567544433 78888 88899999999998
Q ss_pred cc
Q 020013 196 TR 197 (332)
Q Consensus 196 T~ 197 (332)
+-
T Consensus 237 ~D 238 (261)
T 3qz6_A 237 GD 238 (261)
T ss_dssp EH
T ss_pred hH
Confidence 64
No 415
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=90.33 E-value=2.4 Score=38.20 Aligned_cols=93 Identities=14% Similarity=0.075 Sum_probs=60.7
Q ss_pred HHHHHHh-CCCEEEEecCCHHHHHHHHHcCCCEEEEecCCC----CcccCCC-Cch---hhhHHHHHHHhCCCCCcEEee
Q 020013 102 LVLEAHS-AGVKVVPQVGSFDEARKAVNAGVDAIIVQGREA----GGHVIGQ-DGL---ISLLPMVVDLIGDRDIPIIAA 172 (332)
Q Consensus 102 ~i~~~~~-~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~ea----GGh~~~~-~~~---~~ll~~i~~~~~~~~iPviaa 172 (332)
.++.+++ ....+++.+.+.-.|+.+.++|.|+|.+.|... -|+.+.. .+. ...+..|.+.. ++||++.
T Consensus 13 ~lr~l~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~---~~PviaD 89 (298)
T 3eoo_A 13 KFRAAVAAEQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT---NLPLLVD 89 (298)
T ss_dssp HHHHHHHHSSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC---CSCEEEE
T ss_pred HHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc---CCeEEEE
Confidence 3444444 457778899999999999999999999976321 2443222 222 33445555555 7999986
Q ss_pred c--CcCCHHH----HHHHHHcCcceeeeccc
Q 020013 173 G--GIVDARG----YVAALSLGAQGICLGTR 197 (332)
Q Consensus 173 G--GI~~~~~----v~~al~~GA~gV~~GT~ 197 (332)
+ |-+++.+ +..+.+.||+||.+=-.
T Consensus 90 ~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq 120 (298)
T 3eoo_A 90 IDTGWGGAFNIARTIRSFIKAGVGAVHLEDQ 120 (298)
T ss_dssp CTTCSSSHHHHHHHHHHHHHTTCSEEEEECB
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCeEEEECCC
Confidence 4 3335544 45667799999987443
No 416
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=90.13 E-value=1.6 Score=38.90 Aligned_cols=88 Identities=24% Similarity=0.234 Sum_probs=58.9
Q ss_pred HHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCC---CcccCCC-Cc---hhhhHHHHHHHhCCCCCcEEeecC-
Q 020013 103 VLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREA---GGHVIGQ-DG---LISLLPMVVDLIGDRDIPIIAAGG- 174 (332)
Q Consensus 103 i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~ea---GGh~~~~-~~---~~~ll~~i~~~~~~~~iPviaaGG- 174 (332)
++.+++.+ .+++.+.+.-.|+.+.++|.|+|.+.|... =|+.+.. .+ ....++.|.+.. ++||++..-
T Consensus 10 lr~l~~~~-i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~---~~pviaD~d~ 85 (275)
T 2ze3_A 10 FHALHQTG-FLLPNAWDVASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAV---AIPVNADIEA 85 (275)
T ss_dssp HHHHHHHC-EEECEESSHHHHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHC---SSCEEEECTT
T ss_pred HHHHhhCC-eeEecccCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhc---CCCEEeecCC
Confidence 34444446 778889999999999999999999975321 2443221 22 233455555555 689998753
Q ss_pred -cC-CH----HHHHHHHHcCcceeee
Q 020013 175 -IV-DA----RGYVAALSLGAQGICL 194 (332)
Q Consensus 175 -I~-~~----~~v~~al~~GA~gV~~ 194 (332)
-+ ++ +++..++++||+||.+
T Consensus 86 Gyg~~~~~~~~~v~~l~~aGaagv~i 111 (275)
T 2ze3_A 86 GYGHAPEDVRRTVEHFAALGVAGVNL 111 (275)
T ss_dssp CSSSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 32 44 4566778899999988
No 417
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=90.12 E-value=3.4 Score=34.46 Aligned_cols=122 Identities=9% Similarity=0.026 Sum_probs=67.9
Q ss_pred ccceecCCCCCCCCc-HHH-HHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcC
Q 020013 10 EYGIVQAPLGPDISG-PEL-VAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEK 87 (332)
Q Consensus 10 ~~Pii~apM~~g~s~-~~l-a~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~ 87 (332)
+.|++.+-|. .+ |+. +....++|.=++.... ....+.+.+.++.+++. +.++|+.+.......+.++.+.+.+
T Consensus 53 ~~~i~~~l~~---~di~~~~~~~a~~~Gad~v~vh~-~~~~~~~~~~~~~~~~~-g~~~gv~~~s~~~p~~~~~~~~~~g 127 (207)
T 3ajx_A 53 DKIVFADMKT---MDAGELEADIAFKAGADLVTVLG-SADDSTIAGAVKAAQAH-NKGVVVDLIGIEDKATRAQEVRALG 127 (207)
T ss_dssp TSEEEEEEEE---CSCHHHHHHHHHHTTCSEEEEET-TSCHHHHHHHHHHHHHH-TCEEEEECTTCSSHHHHHHHHHHTT
T ss_pred CCeEEEEEEe---cCccHHHHHHHHhCCCCEEEEec-cCChHHHHHHHHHHHHc-CCceEEEEecCCChHHHHHHHHHhC
Confidence 4688877774 24 544 6777788876665322 23445556666666543 4445554431111133455566678
Q ss_pred CcEE-EEc------cCCCcH-HHHHHHHhCCCEEEEecC-CHHHHHHHHHcCCCEEEE
Q 020013 88 VAVL-QVS------WGEYSE-ELVLEAHSAGVKVVPQVG-SFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 88 ~~~I-~~~------~g~~~~-~~i~~~~~~g~~v~~~v~-s~~~a~~a~~~g~D~ivv 136 (332)
+|.| ... .|..+. +.++.+....++++..-+ +++.+..+.++|+|+|++
T Consensus 128 ~d~v~~~~~~~~~~~g~~~~~~~i~~~~~~~~pi~v~GGI~~~~~~~~~~aGad~vvv 185 (207)
T 3ajx_A 128 AKFVEMHAGLDEQAKPGFDLNGLLAAGEKARVPFSVAGGVKVATIPAVQKAGAEVAVA 185 (207)
T ss_dssp CSEEEEECCHHHHTSTTCCTHHHHHHHHHHTSCEEEESSCCGGGHHHHHHTTCSEEEE
T ss_pred CCEEEEEecccccccCCCchHHHHHHhhCCCCCEEEECCcCHHHHHHHHHcCCCEEEE
Confidence 9998 431 232222 344444432455543322 366777788999999998
No 418
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=90.10 E-value=4.1 Score=35.59 Aligned_cols=111 Identities=12% Similarity=0.033 Sum_probs=70.5
Q ss_pred CCcHHHHHHHHhCCCceeecCCCCCCHHH-HHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc------
Q 020013 22 ISGPELVAAVANAGGLGLLRAPDWEAPDY-LRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS------ 94 (332)
Q Consensus 22 ~s~~~la~avs~aGglG~i~~~~~~~~e~-~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~------ 94 (332)
..+|--++.++..+|=|+..-.+- +-.. -...+..+++....|+.+-... .++.++.+++.+|+.|++-
T Consensus 24 ~Pdpv~aA~~ae~aGdgITvHlRe-DrRHI~d~Dv~~L~~~~~~~lNlE~a~---t~emi~ial~~kP~~vtLVPEkreE 99 (260)
T 3o6c_A 24 DPDLLEAAFIVARHGDQITLHVRE-DRRHAQDFDLENIIKFCKSPVNLECAL---NDEILNLALKLKPHRVTLVPEKREE 99 (260)
T ss_dssp CSCHHHHHHHHHHHSSEEEEECCT-TCSSSCHHHHHHHHHHCSSCEEEEECS---CHHHHHHHHHHCCSEEEECCCSGGG
T ss_pred CCCHHHHHHHHHHhCCeEEEeeCC-CcccCCHHHHHHHHHHcCCCEEeecCC---CHHHHHHHHHcCCCEEEECCCCCCc
Confidence 356666666665444555432211 1000 1223455555555666554332 4789999999999998763
Q ss_pred ----cCC-----CcHHHHHHHHhCCCEEEEecC-CHHHHHHHHHcCCCEEEE
Q 020013 95 ----WGE-----YSEELVLEAHSAGVKVVPQVG-SFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 95 ----~g~-----~~~~~i~~~~~~g~~v~~~v~-s~~~a~~a~~~g~D~ivv 136 (332)
.|. ...++++++++.|+.|-.-+. +++....+.+.|+|.|=+
T Consensus 100 ~TTegGldv~~~~L~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~GAd~IEL 151 (260)
T 3o6c_A 100 LTTEGGLCLNHAKLKQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIEL 151 (260)
T ss_dssp BCTTSSBCTTCTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHTTCSEEEE
T ss_pred cCCCCChhhCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEE
Confidence 111 124688999999998866554 678888999999999977
No 419
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=90.00 E-value=1.9 Score=37.96 Aligned_cols=90 Identities=20% Similarity=0.244 Sum_probs=61.1
Q ss_pred HHHHHHhCC-CEEEEecCCHHHHHHHHHcCCCEEEEecCCC---CcccCC-CCch---hhhHHHHHHHhCCCCCcEEeec
Q 020013 102 LVLEAHSAG-VKVVPQVGSFDEARKAVNAGVDAIIVQGREA---GGHVIG-QDGL---ISLLPMVVDLIGDRDIPIIAAG 173 (332)
Q Consensus 102 ~i~~~~~~g-~~v~~~v~s~~~a~~a~~~g~D~ivv~G~ea---GGh~~~-~~~~---~~ll~~i~~~~~~~~iPviaaG 173 (332)
.++.+++.+ ..+++.+.+.-.|+.+.++|+|+|.+.+... =|+.+. ..+. +..++.|.+.. ++||++..
T Consensus 11 ~lr~l~~~~~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~---~~pviaD~ 87 (255)
T 2qiw_A 11 KFASDHESGKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAV---SIPVSVDV 87 (255)
T ss_dssp HHHHHHHTCCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHC---SSCEEEEC
T ss_pred HHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcC---CCCEEecc
Confidence 345555554 5667889999999999999999999965311 234322 1222 33445555555 68999864
Q ss_pred C--cCC--HHHHHHHHHcCcceeee
Q 020013 174 G--IVD--ARGYVAALSLGAQGICL 194 (332)
Q Consensus 174 G--I~~--~~~v~~al~~GA~gV~~ 194 (332)
- -++ .+++..+++.||+||.+
T Consensus 88 ~~Gyg~~~~~~~~~l~~aGa~gv~i 112 (255)
T 2qiw_A 88 ESGYGLSPADLIAQILEAGAVGINV 112 (255)
T ss_dssp TTCTTCCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCcHHHHHHHHHHHcCCcEEEE
Confidence 2 222 67888999999999988
No 420
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=90.00 E-value=4 Score=30.16 Aligned_cols=82 Identities=15% Similarity=0.047 Sum_probs=56.6
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..++..|..+. .+.+.+++.... ...+|.+++.-.-. ....+.++..+++... ++|+|.-.+-.+.+...
T Consensus 21 ~~l~~~~~~v~-~~~~~~~a~~~~~~~~~dlvl~D~~l~------~~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~ 91 (124)
T 1srr_A 21 EVFNKEGYQTF-QAANGLQALDIVTKERPDLVLLDMKIP------GMDGIEILKRMKVIDE--NIRVIIMTAYGELDMIQ 91 (124)
T ss_dssp HHHHTTTCEEE-EESSHHHHHHHHHHHCCSEEEEESCCT------TCCHHHHHHHHHHHCT--TCEEEEEESSCCHHHHH
T ss_pred HHHHHCCcEEE-EeCCHHHHHHHHhccCCCEEEEecCCC------CCCHHHHHHHHHHhCC--CCCEEEEEccCchHHHH
Confidence 34455677765 677777776544 45799999853211 1133667777776532 68999888888888899
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
+++..|++++..
T Consensus 92 ~~~~~g~~~~l~ 103 (124)
T 1srr_A 92 ESKELGALTHFA 103 (124)
T ss_dssp HHHHHTCCCEEE
T ss_pred HHHhcChHhhcc
Confidence 999999987753
No 421
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=89.95 E-value=4.9 Score=36.86 Aligned_cols=86 Identities=16% Similarity=0.222 Sum_probs=59.5
Q ss_pred HHHHHHHHHhhc--CCcEEEEeecCC------CCH---HHHHHHHhcCCcEEEEccCC------------CcHHHHHHHH
Q 020013 51 LRDLIRKTRSLT--ERPFGVGVVLAF------PHN---ENIKAILSEKVAVLQVSWGE------------YSEELVLEAH 107 (332)
Q Consensus 51 ~~~~i~~~r~~~--~~p~gvnl~~~~------~~~---~~~~~~~~~~~~~I~~~~g~------------~~~~~i~~~~ 107 (332)
+.+.++.+|+.. +.|+++-+-... ..+ +.++.+.+.|+|+|+++.|. ...++++.++
T Consensus 205 ~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir 284 (349)
T 3hgj_A 205 PLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVR 284 (349)
T ss_dssp HHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHH
Confidence 567778888775 678888776432 112 23556667899999987421 1124566666
Q ss_pred h-CCCEEEEe--cCCHHHHHHHHHcC-CCEEEE
Q 020013 108 S-AGVKVVPQ--VGSFDEARKAVNAG-VDAIIV 136 (332)
Q Consensus 108 ~-~g~~v~~~--v~s~~~a~~a~~~g-~D~ivv 136 (332)
+ .+++|+.. +.+.+++.++++.| +|.|.+
T Consensus 285 ~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~i 317 (349)
T 3hgj_A 285 KRVGLRTGAVGLITTPEQAETLLQAGSADLVLL 317 (349)
T ss_dssp HHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHcCceEEEECCCCCHHHHHHHHHCCCceEEEe
Confidence 5 37787754 56899999999998 999987
No 422
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=89.88 E-value=2.5 Score=36.87 Aligned_cols=122 Identities=20% Similarity=0.303 Sum_probs=71.0
Q ss_pred HHHHHHHHhcCCcEEEEc-------cCCCcHHH----HHHHHhCCCEEEEecCC-HHH-------------HHHHHH-cC
Q 020013 77 NENIKAILSEKVAVLQVS-------WGEYSEEL----VLEAHSAGVKVVPQVGS-FDE-------------ARKAVN-AG 130 (332)
Q Consensus 77 ~~~~~~~~~~~~~~I~~~-------~g~~~~~~----i~~~~~~g~~v~~~v~s-~~~-------------a~~a~~-~g 130 (332)
.+....+.+.|+++|.++ ||. ..+. ++.+.+.|+.++..++. .++ .+.+++ ..
T Consensus 71 ~~~~~mL~d~G~~~ViiGHSERR~~f~E-td~~v~~Kv~~Al~~GL~pI~CvGEtleereag~t~~vv~~Ql~~~l~~~~ 149 (244)
T 2v5b_A 71 ADALASLKDYGISWVVLGHSERRLYYGE-TNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLS 149 (244)
T ss_dssp HHHHHHHHHTTCCEEEECCHHHHHHSCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHcCCCEEEeCchhhhhccCC-CHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCC
Confidence 344778889999999985 454 3444 44556789998888873 332 111221 12
Q ss_pred CC----EEEEe-cCCCCc--ccCCCC---chhhhHHHHHHH-hCC---CCCcEEeecCcCCHHHHHHHHHc-Ccceeeec
Q 020013 131 VD----AIIVQ-GREAGG--HVIGQD---GLISLLPMVVDL-IGD---RDIPIIAAGGIVDARGYVAALSL-GAQGICLG 195 (332)
Q Consensus 131 ~D----~ivv~-G~eaGG--h~~~~~---~~~~ll~~i~~~-~~~---~~iPviaaGGI~~~~~v~~al~~-GA~gV~~G 195 (332)
.+ .||+. ..-+=| .+..+. .....+++.... +.. .+++|+..|+| +++|+.+.++. ..||+.+|
T Consensus 150 ~~~~~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVG 228 (244)
T 2v5b_A 150 KEAWSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSV-TAKNARTLYQMRDINGFLVG 228 (244)
T ss_dssp TGGGGGEEEEECCHHHHSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCC-CHHHHHHHHTSTTCCEEEES
T ss_pred HHHcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCC-CHhHHHHHhcCCCCCeeeec
Confidence 22 55542 222222 221110 112233321111 100 14899999999 89999999875 68999999
Q ss_pred ccccc
Q 020013 196 TRFVA 200 (332)
Q Consensus 196 T~fl~ 200 (332)
.+-|.
T Consensus 229 gASL~ 233 (244)
T 2v5b_A 229 GASLK 233 (244)
T ss_dssp GGGSS
T ss_pred hHHHH
Confidence 98765
No 423
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=89.88 E-value=4.1 Score=31.47 Aligned_cols=77 Identities=16% Similarity=0.057 Sum_probs=54.6
Q ss_pred CCCEEEEecCCHHHHHHHHHc-CC-CEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHH
Q 020013 109 AGVKVVPQVGSFDEARKAVNA-GV-DAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS 186 (332)
Q Consensus 109 ~g~~v~~~v~s~~~a~~a~~~-g~-D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~ 186 (332)
.+..+. .+.+.+++...... .+ |.|++.-.-.+ ...+.++..+++... ++|||+..+-.+.+.+.+++.
T Consensus 26 ~~~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~------~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~ 96 (151)
T 3kcn_A 26 FDFEVT-TCESGPEALACIKKSDPFSVIMVDMRMPG------MEGTEVIQKARLISP--NSVYLMLTGNQDLTTAMEAVN 96 (151)
T ss_dssp TTSEEE-EESSHHHHHHHHHHSCCCSEEEEESCCSS------SCHHHHHHHHHHHCS--SCEEEEEECGGGHHHHHHHHH
T ss_pred cCceEE-EeCCHHHHHHHHHcCCCCCEEEEeCCCCC------CcHHHHHHHHHhcCC--CcEEEEEECCCCHHHHHHHHH
Confidence 466655 67788888776654 44 99998533111 234677778776543 689988888878888999999
Q ss_pred cC-cceeee
Q 020013 187 LG-AQGICL 194 (332)
Q Consensus 187 ~G-A~gV~~ 194 (332)
.| ++++..
T Consensus 97 ~g~~~~~l~ 105 (151)
T 3kcn_A 97 EGQVFRFLN 105 (151)
T ss_dssp HTCCSEEEE
T ss_pred cCCeeEEEc
Confidence 99 888753
No 424
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=89.83 E-value=4.8 Score=35.85 Aligned_cols=89 Identities=19% Similarity=0.136 Sum_probs=55.3
Q ss_pred HHHHHHhC-CCEEEEecCCHHHHHHHHHcCCCEEEEecCCCC----cccCC-CCch---hhhHHHHHHHhCCCCCc-EEe
Q 020013 102 LVLEAHSA-GVKVVPQVGSFDEARKAVNAGVDAIIVQGREAG----GHVIG-QDGL---ISLLPMVVDLIGDRDIP-IIA 171 (332)
Q Consensus 102 ~i~~~~~~-g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaG----Gh~~~-~~~~---~~ll~~i~~~~~~~~iP-via 171 (332)
.++.+++. ...+++.+.+.-.|+.+.++|+|+|.+ |...+ |+.+. ..+. +...+.+++.. +.| |++
T Consensus 25 ~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilv-GdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~---~~~~vva 100 (281)
T 1oy0_A 25 HLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLV-GDSAANVVYGYDTTVPISIDELIPLVRGVVRGA---PHALVVA 100 (281)
T ss_dssp HHHHHHHHTCCEEEEECCSHHHHHHHHTTTCCEEEE-CTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHC---TTSEEEE
T ss_pred HHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEE-CHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcC---CCCeEEE
Confidence 34445544 466778899999999999999999976 53222 44322 1222 33445566555 444 555
Q ss_pred ecCcC----CHHH----HHHHHH-cCcceeee
Q 020013 172 AGGIV----DARG----YVAALS-LGAQGICL 194 (332)
Q Consensus 172 aGGI~----~~~~----v~~al~-~GA~gV~~ 194 (332)
.=+.+ ++++ +...+. .||++|-+
T Consensus 101 D~pfgsy~~s~~~a~~na~rl~~eaGa~aVkl 132 (281)
T 1oy0_A 101 DLPFGSYEAGPTAALAAATRFLKDGGAHAVKL 132 (281)
T ss_dssp ECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred ECCCCcccCCHHHHHHHHHHHHHHhCCeEEEE
Confidence 44432 5655 455666 99999988
No 425
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=89.83 E-value=2.3 Score=37.08 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=65.1
Q ss_pred HHHHHHHHhcCCcEEEEccCC----------CcHHHH-------HHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecC
Q 020013 77 NENIKAILSEKVAVLQVSWGE----------YSEELV-------LEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 77 ~~~~~~~~~~~~~~I~~~~g~----------~~~~~i-------~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~ 139 (332)
.+.++.+++.|++.|++---. ...++. +.+++.+++++.. ... ..+.+.|+|+|-+.
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liIn-d~~---~lA~~~gAdGVHLg-- 119 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVN-DRA---DIARAAGADVLHLG-- 119 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEE-SCH---HHHHHHTCSEEEEC--
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEe-CHH---HHHHHhCCCEEEec--
Confidence 466788889999999994221 122322 2345678887764 223 33667899998661
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccccc
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 200 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~fl~ 200 (332)
..... ...+++.+. .-.+..--+.|.+++.++...|||-|.+|..|-.
T Consensus 120 -------~~dl~---~~~~r~~~~---~~~~iG~S~ht~~Ea~~A~~~GaDyI~vgpvf~T 167 (243)
T 3o63_A 120 -------QRDLP---VNVARQILA---PDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPT 167 (243)
T ss_dssp -------TTSSC---HHHHHHHSC---TTCEEEEEECSHHHHHHHHHSSCSEEEECCSSCC
T ss_pred -------CCcCC---HHHHHHhhC---CCCEEEEeCCCHHHHHHHhhCCCCEEEEcCccCC
Confidence 11111 233444332 1223333478999999999999999999987643
No 426
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=89.79 E-value=3.3 Score=36.77 Aligned_cols=89 Identities=17% Similarity=0.096 Sum_probs=56.0
Q ss_pred HHHHHhC-CCEEEEecCCHHHHHHHHHcCCCEEEEecCCCC----cccCC-CCch---hhhHHHHHHHhCCCCCcEEeec
Q 020013 103 VLEAHSA-GVKVVPQVGSFDEARKAVNAGVDAIIVQGREAG----GHVIG-QDGL---ISLLPMVVDLIGDRDIPIIAAG 173 (332)
Q Consensus 103 i~~~~~~-g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaG----Gh~~~-~~~~---~~ll~~i~~~~~~~~iPviaaG 173 (332)
++.+++. ...+++.+.+.-.|+.+.++|+|+|.+ |...+ |+.+. ..+. +...+.+++..+ ..||++.=
T Consensus 9 lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilv-GdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~--~~~vvaD~ 85 (275)
T 1o66_A 9 LQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLV-GDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAK--NAMIVSDL 85 (275)
T ss_dssp HHHHHHHTCCEEEEECCSHHHHHHHHHTTCCEEEE-CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCS--SSEEEEEC
T ss_pred HHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEE-CHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCC--CCeEEEEC
Confidence 4445544 466778899999999999999999976 53222 44322 1222 223445555542 35677774
Q ss_pred CcC----CHHH----HHHHHHcCcceeee
Q 020013 174 GIV----DARG----YVAALSLGAQGICL 194 (332)
Q Consensus 174 GI~----~~~~----v~~al~~GA~gV~~ 194 (332)
+.+ ++++ +..+++.||++|-+
T Consensus 86 pfgsy~~s~~~a~~na~rl~kaGa~aVkl 114 (275)
T 1o66_A 86 PFGAYQQSKEQAFAAAAELMAAGAHMVKL 114 (275)
T ss_dssp CTTSSSSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCcEEEE
Confidence 442 4544 44688899999987
No 427
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=89.74 E-value=4.6 Score=29.53 Aligned_cols=82 Identities=21% Similarity=0.131 Sum_probs=56.7
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.+...|..+. .+.+.+++.... ...+|.+++.-.-. ....+.++.++++... .+|+|+-.+-.+.+...
T Consensus 18 ~~l~~~g~~v~-~~~~~~~a~~~~~~~~~dlil~D~~l~------~~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~ 88 (121)
T 2pl1_A 18 VQIQDAGHQVD-DAEDAKEADYYLNEHIPDIAIVDLGLP------DEDGLSLIRRWRSNDV--SLPILVLTARESWQDKV 88 (121)
T ss_dssp HHHHHTTCEEE-EESSHHHHHHHHHHSCCSEEEECSCCS------SSCHHHHHHHHHHTTC--CSCEEEEESCCCHHHHH
T ss_pred HHHhhcCCEEE-EeCCHHHHHHHHhccCCCEEEEecCCC------CCCHHHHHHHHHhcCC--CCCEEEEecCCCHHHHH
Confidence 44556677654 677777776654 45689998842211 1133667777776432 68999888887888999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++..||+++..
T Consensus 89 ~~~~~g~~~~l~ 100 (121)
T 2pl1_A 89 EVLSAGADDYVT 100 (121)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHcCccceEE
Confidence 999999998764
No 428
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=89.73 E-value=5.3 Score=36.41 Aligned_cols=87 Identities=17% Similarity=0.231 Sum_probs=60.9
Q ss_pred HHHHHHHHHHhhcCCcEEEEeecCC------CC---HHHHHHHHhcCCcEEEEccCC--------Cc---HHHHHHHHh-
Q 020013 50 YLRDLIRKTRSLTERPFGVGVVLAF------PH---NENIKAILSEKVAVLQVSWGE--------YS---EELVLEAHS- 108 (332)
Q Consensus 50 ~~~~~i~~~r~~~~~p~gvnl~~~~------~~---~~~~~~~~~~~~~~I~~~~g~--------~~---~~~i~~~~~- 108 (332)
.+.+.++.+|+..+.|++|-+-... .. .+.++.+.+.|+|+|+++.+. .+ .++++.+++
T Consensus 196 ~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~ 275 (338)
T 1z41_A 196 FLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQ 275 (338)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHH
Confidence 3567788888777889988875532 11 234556677899999986431 11 245666665
Q ss_pred CCCEEEE--ecCCHHHHHHHHHcC-CCEEEE
Q 020013 109 AGVKVVP--QVGSFDEARKAVNAG-VDAIIV 136 (332)
Q Consensus 109 ~g~~v~~--~v~s~~~a~~a~~~g-~D~ivv 136 (332)
.+++|+. .+.+.+++.++++.| +|.|.+
T Consensus 276 ~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 276 ADMATGAVGMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp HCCEEEECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred CCCCEEEECCCCCHHHHHHHHHcCCceEEee
Confidence 3778775 466899999999998 999987
No 429
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=89.56 E-value=2.2 Score=38.42 Aligned_cols=91 Identities=19% Similarity=0.226 Sum_probs=57.6
Q ss_pred HHHHHHhC-CCEEEEecCCHHHHHHHHHcCCCEEEEecCCC---CcccCCC-Cc---hhhhHHHHHHHhCCCCCcEEeec
Q 020013 102 LVLEAHSA-GVKVVPQVGSFDEARKAVNAGVDAIIVQGREA---GGHVIGQ-DG---LISLLPMVVDLIGDRDIPIIAAG 173 (332)
Q Consensus 102 ~i~~~~~~-g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~ea---GGh~~~~-~~---~~~ll~~i~~~~~~~~iPviaaG 173 (332)
.++.+++. ...+++.+.+.-.|+.+.++|.|+|.+.|... -|+.+.. .+ ....+..|.+.. ++||++..
T Consensus 10 ~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~---~~PviaD~ 86 (295)
T 1s2w_A 10 QLKQMLNSKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDAS---DVPILLDA 86 (295)
T ss_dssp HHHHHHHSSSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTC---SSCEEEEC
T ss_pred HHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC---CCCEEecC
Confidence 34555554 46778899999999999999999999975421 2333211 11 133344455544 79999874
Q ss_pred --CcCCHH----HHHHHHHcCcceeeec
Q 020013 174 --GIVDAR----GYVAALSLGAQGICLG 195 (332)
Q Consensus 174 --GI~~~~----~v~~al~~GA~gV~~G 195 (332)
|-+++. ++..++..||+||.+=
T Consensus 87 d~Gyg~~~~v~~~v~~l~~aGaagv~iE 114 (295)
T 1s2w_A 87 DTGYGNFNNARRLVRKLEDRGVAGACLE 114 (295)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 344544 4556778999999883
No 430
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=89.54 E-value=0.89 Score=34.79 Aligned_cols=84 Identities=17% Similarity=0.095 Sum_probs=58.1
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.+++.|..+. .+.+.+++....+ ..+|.|++.-.-.++ ....+.++..+++... ++|||.-.+-.+.+.+.
T Consensus 24 ~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~----~~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~ 96 (136)
T 3kto_A 24 KLLSPLDVTIQ-CFASAESFMRQQISDDAIGMIIEAHLEDK----KDSGIELLETLVKRGF--HLPTIVMASSSDIPTAV 96 (136)
T ss_dssp HHHTTSSSEEE-EESSHHHHTTSCCCTTEEEEEEETTGGGB----TTHHHHHHHHHHHTTC--CCCEEEEESSCCHHHHH
T ss_pred HHHHHCCcEEE-EeCCHHHHHHHHhccCCCEEEEeCcCCCC----CccHHHHHHHHHhCCC--CCCEEEEEcCCCHHHHH
Confidence 34455677766 6778887765543 458988885321110 0234677888877542 68999988888999999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
+++.+||+++..
T Consensus 97 ~~~~~ga~~~l~ 108 (136)
T 3kto_A 97 RAMRASAADFIE 108 (136)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHcChHHhee
Confidence 999999998764
No 431
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=89.47 E-value=3.7 Score=36.25 Aligned_cols=89 Identities=12% Similarity=0.108 Sum_probs=57.7
Q ss_pred HHHHHhC-CCEEEEecCCHHHHHHHHHcCCCEEEEecCCCC----cccCC-CCch---hhhHHHHHHHhCCCCCcEEeec
Q 020013 103 VLEAHSA-GVKVVPQVGSFDEARKAVNAGVDAIIVQGREAG----GHVIG-QDGL---ISLLPMVVDLIGDRDIPIIAAG 173 (332)
Q Consensus 103 i~~~~~~-g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaG----Gh~~~-~~~~---~~ll~~i~~~~~~~~iPviaaG 173 (332)
++.+++. ...+++.+.+.-.|+.+.++|+|+|.+ |...| ||.+. ..+. +...+.+++..+ ..||++.=
T Consensus 9 lr~~k~~g~~i~~~tayD~~sA~l~e~aG~d~ilv-Gdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~--~~~vvaD~ 85 (264)
T 1m3u_A 9 LQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLV-GDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAP--NCLLLADL 85 (264)
T ss_dssp HHHHHHHTCCEEEEECCSHHHHHHHHHHTCCEEEE-CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCT--TSEEEEEC
T ss_pred HHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEE-CHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCC--CCcEEEEC
Confidence 4445544 466778899999999999999999998 54322 44322 1222 223445555442 35678776
Q ss_pred CcC---CHHHH----HHHHHcCcceeee
Q 020013 174 GIV---DARGY----VAALSLGAQGICL 194 (332)
Q Consensus 174 GI~---~~~~v----~~al~~GA~gV~~ 194 (332)
+.+ +++++ .++++.||++|-+
T Consensus 86 pfgsy~~~~~a~~~a~rl~kaGa~aVkl 113 (264)
T 1m3u_A 86 PFMAYATPEQAFENAATVMRAGANMVKI 113 (264)
T ss_dssp CTTSSSSHHHHHHHHHHHHHTTCSEEEC
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 665 55444 4678899999987
No 432
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=89.47 E-value=3.4 Score=38.14 Aligned_cols=108 Identities=9% Similarity=0.020 Sum_probs=73.8
Q ss_pred HHHHHhcCCcEEEEccCC-CcH---HHHHHHHh---CCCEEEEecC---CHHHHHH----HHHcCCCEEEEecCCCCccc
Q 020013 80 IKAILSEKVAVLQVSWGE-YSE---ELVLEAHS---AGVKVVPQVG---SFDEARK----AVNAGVDAIIVQGREAGGHV 145 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~-~~~---~~i~~~~~---~g~~v~~~v~---s~~~a~~----a~~~g~D~ivv~G~eaGGh~ 145 (332)
+..+.+.|.+.|-++.|. .+. +.++.+++ .++++...++ +.+++.. ..+.|+++| +-+
T Consensus 154 a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP------ 225 (371)
T 2ovl_A 154 ADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWI--EEP------ 225 (371)
T ss_dssp HHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEE--ECC------
T ss_pred HHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE--ECC------
Confidence 344557789999988775 233 44555555 3577877765 6666643 345688865 322
Q ss_pred CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeeccccc
Q 020013 146 IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 199 (332)
Q Consensus 146 ~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~GT~fl 199 (332)
-+...+..+.++++.+ ++||++.+.+.+.+++.+++..| +|.|++....+
T Consensus 226 -~~~~d~~~~~~l~~~~---~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 276 (371)
T 2ovl_A 226 -TIPDDLVGNARIVRES---GHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNI 276 (371)
T ss_dssp -SCTTCHHHHHHHHHHH---CSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTT
T ss_pred -CCcccHHHHHHHHhhC---CCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCcccc
Confidence 1113466777888777 79999999999999999999876 68888765433
No 433
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=89.38 E-value=4.9 Score=29.97 Aligned_cols=82 Identities=12% Similarity=0.051 Sum_probs=56.5
Q ss_pred HHhC-CCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHH
Q 020013 106 AHSA-GVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVA 183 (332)
Q Consensus 106 ~~~~-g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~ 183 (332)
+... |..++..+.+.+++.... ...+|.|++.-.-.+ ...+.++..+++... ..+|||.-.+-.+.+.+.+
T Consensus 22 l~~~~~~~~~~~~~~~~~a~~~~~~~~~dlvllD~~l~~------~~g~~~~~~l~~~~~-~~~~ii~ls~~~~~~~~~~ 94 (130)
T 1dz3_A 22 ISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLDIIMPH------LDGLAVLERIRAGFE-HQPNVIMLTAFGQEDVTKK 94 (130)
T ss_dssp HHTSTTEEEEEEESSHHHHHHHHHHHCCSEEEEESCCSS------SCHHHHHHHHHHHCS-SCCEEEEEEETTCHHHHHH
T ss_pred HHhCCCceEEEEeCCHHHHHHHHhcCCCCEEEEecCCCC------CCHHHHHHHHHhcCC-CCCcEEEEecCCCHHHHHH
Confidence 4444 667766788888877654 457899998532111 133677777776421 2578888888778888999
Q ss_pred HHHcCcceeee
Q 020013 184 ALSLGAQGICL 194 (332)
Q Consensus 184 al~~GA~gV~~ 194 (332)
++..||+++..
T Consensus 95 ~~~~ga~~~l~ 105 (130)
T 1dz3_A 95 AVELGASYFIL 105 (130)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHcCCCEEEe
Confidence 99999988753
No 434
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=89.36 E-value=2.8 Score=37.84 Aligned_cols=93 Identities=15% Similarity=0.071 Sum_probs=60.3
Q ss_pred HHHHHHhC-CCEEEEecCCHHHHHHHHHcCCCEEEEecCCC---CcccCCC-Cch---hhhHHHHHHHhCCCCCcEEeec
Q 020013 102 LVLEAHSA-GVKVVPQVGSFDEARKAVNAGVDAIIVQGREA---GGHVIGQ-DGL---ISLLPMVVDLIGDRDIPIIAAG 173 (332)
Q Consensus 102 ~i~~~~~~-g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~ea---GGh~~~~-~~~---~~ll~~i~~~~~~~~iPviaaG 173 (332)
.++.+++. ...+++.+.+.-.|+.+.++|.|+|.+.|... -|+.+.. .+. ...+..|.+.. ++||++..
T Consensus 20 ~lr~l~~~~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~---~~pviaD~ 96 (305)
T 3ih1_A 20 RFRALVEANEILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRAT---DLPVLVDI 96 (305)
T ss_dssp HHHHHHHSSSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHH---CCCEEEEC
T ss_pred HHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhc---CCCEEEEC
Confidence 34445555 46677889999999999999999999966211 1443221 222 33455666666 78999864
Q ss_pred --CcCCHHH----HHHHHHcCcceeeeccc
Q 020013 174 --GIVDARG----YVAALSLGAQGICLGTR 197 (332)
Q Consensus 174 --GI~~~~~----v~~al~~GA~gV~~GT~ 197 (332)
|-+++.+ +..+.+.||+||.+=-.
T Consensus 97 d~Gyg~~~~v~~~v~~l~~aGaagv~iED~ 126 (305)
T 3ih1_A 97 DTGFGGVLNVARTAVEMVEAKVAAVQIEDQ 126 (305)
T ss_dssp TTCSSSHHHHHHHHHHHHHTTCSEEEEECB
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcEEEECCC
Confidence 3345454 45566799999987443
No 435
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=89.23 E-value=3.7 Score=36.69 Aligned_cols=118 Identities=18% Similarity=0.097 Sum_probs=73.7
Q ss_pred HHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEEecC------C----HHHHHHHHHcCCCEEEEe-cCCCCcccCC
Q 020013 79 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVG------S----FDEARKAVNAGVDAIIVQ-GREAGGHVIG 147 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~~v~------s----~~~a~~a~~~g~D~ivv~-G~eaGGh~~~ 147 (332)
.++.+.+.++..|.++-. ..+...+.++..+++|...++ + ..|++.+.+.|+|-|-+. +. |-...+
T Consensus 79 lc~eA~~~g~aaVCV~P~-~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINi--g~lk~g 155 (288)
T 3oa3_A 79 LCAEAKEYGFATVCVRPD-YVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNY--PWLSEK 155 (288)
T ss_dssp HHHHHHHHTCSEEEECGG-GHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCH--HHHHTT
T ss_pred HHHHHHhcCCcEEEECHH-HHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeeh--hhhcCC
Confidence 345666788999988722 223333445556788765553 1 347888999999988642 22 100001
Q ss_pred C-CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHH----HHHcCcceeeeccccc
Q 020013 148 Q-DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVA----ALSLGAQGICLGTRFV 199 (332)
Q Consensus 148 ~-~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~----al~~GA~gV~~GT~fl 199 (332)
. ......+.++++.....-+.||..-|.-+.+++.. +..+|||.|-..|.|-
T Consensus 156 ~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~ 212 (288)
T 3oa3_A 156 RYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFN 212 (288)
T ss_dssp CHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSS
T ss_pred cHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCC
Confidence 1 23355667777765321267888877778888544 3458999999999985
No 436
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=89.22 E-value=13 Score=34.15 Aligned_cols=147 Identities=12% Similarity=0.054 Sum_probs=84.9
Q ss_pred HHHHHHhhcCCcEEEEeecCCC-CHHHHHHHHhc-----------CCcEEEEccCCCc--------HHHHHHHHhCCCEE
Q 020013 54 LIRKTRSLTERPFGVGVVLAFP-HNENIKAILSE-----------KVAVLQVSWGEYS--------EELVLEAHSAGVKV 113 (332)
Q Consensus 54 ~i~~~r~~~~~p~gvnl~~~~~-~~~~~~~~~~~-----------~~~~I~~~~g~~~--------~~~i~~~~~~g~~v 113 (332)
.+..+.+..+.|+.+++=--.. ..+.++.++++ +...|-+.....| .++++.++..|+.|
T Consensus 92 ~v~~~A~~~~VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~gFtSVMiDgS~~p~eENI~~Tkevv~~ah~~gvsV 171 (358)
T 1dos_A 92 HVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTL 171 (358)
T ss_dssp HHHHHHHHHTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHCCCCEEEECCCCCCccHHHHHHHHHHHHHHHHhcccCCCceEeecCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 3344434456787776522111 01345544443 3666666533333 24556667666554
Q ss_pred EE---------------------ecCCHHHHHHHHHc--CCC---EEEE-ecCCCCccc-CCCCchhhhHHHHHHHhC--
Q 020013 114 VP---------------------QVGSFDEARKAVNA--GVD---AIIV-QGREAGGHV-IGQDGLISLLPMVVDLIG-- 163 (332)
Q Consensus 114 ~~---------------------~v~s~~~a~~a~~~--g~D---~ivv-~G~eaGGh~-~~~~~~~~ll~~i~~~~~-- 163 (332)
=. ..++++++....+. |+| .+-+ .|.-=|-.. +.+.-.+.+|.++.+.+.
T Consensus 172 EaELG~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~ttgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~ 251 (358)
T 1dos_A 172 EIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKK 251 (358)
T ss_dssp EEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHH
T ss_pred EEEeccccCcCCCccccccccccccCCHHHHHHHHHHhcCCChhceEEEecccccCccCCCCCCcCHHHHHHHHHHHHHH
Confidence 11 12679999988765 898 6654 232111111 112234677777766421
Q ss_pred ----CCCCcEEeec--CcCCHHHHHHHHHcCcceeeeccccccC
Q 020013 164 ----DRDIPIIAAG--GIVDARGYVAALSLGAQGICLGTRFVAS 201 (332)
Q Consensus 164 ----~~~iPviaaG--GI~~~~~v~~al~~GA~gV~~GT~fl~t 201 (332)
..++|++.-| |+ ..+++.+++.+|..-|=++|-+-.+
T Consensus 252 ~g~~~~~vpLVlHGgSG~-~~e~i~~ai~~GV~KiNi~Tdl~~A 294 (358)
T 1dos_A 252 HNLPHNSLNFVFHGGSGS-TAQEIKDSVSYGVVKMNIDTDTQWA 294 (358)
T ss_dssp HTCCTTCSCEEECSCTTC-CHHHHHHHHHTTEEEEEECHHHHHH
T ss_pred hCCCCCCCcEEEeCCCCC-CHHHHHHHHHCCCeEEEEcHHHHHH
Confidence 1269999888 66 5678999999999999999876433
No 437
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=89.10 E-value=2.1 Score=38.47 Aligned_cols=127 Identities=19% Similarity=0.200 Sum_probs=72.6
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---C-CCEEEEecC--C----HHHHHHHHHcCCCEEEEec
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---A-GVKVVPQVG--S----FDEARKAVNAGVDAIIVQG 138 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~-g~~v~~~v~--s----~~~a~~a~~~g~D~ivv~G 138 (332)
..++.+++.|++.+.+. .|.. .+ ++++...+ . .++|+..++ + ++.++.+.+.|+|++.+..
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 45666777889888764 1221 12 23333332 2 488888776 3 3456678899999999976
Q ss_pred CCCCcccCCCCchhhhHHHHHHHhCCCCCcEEee------cCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHH
Q 020013 139 REAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA------GGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKR 212 (332)
Q Consensus 139 ~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa------GGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~ 212 (332)
+..-. ..+........++.++. ++||+.= |---+++.+.+..+.- -.+..-+|+..+-..-.
T Consensus 112 P~y~~--~s~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~~-------pnivgiKdssgd~~~~~ 179 (301)
T 3m5v_A 112 PYYNK--PTQQGLYEHYKAIAQSV---DIPVLLYNVPGRTGCEISTDTIIKLFRDC-------ENIYGVKEASGNIDKCV 179 (301)
T ss_dssp CCSSC--CCHHHHHHHHHHHHHHC---SSCEEEEECHHHHSCCCCHHHHHHHHHHC-------TTEEEEEECSSCHHHHH
T ss_pred CCCCC--CCHHHHHHHHHHHHHhC---CCCEEEEeCchhhCcCCCHHHHHHHHhcC-------CCEEEEEeCCCCHHHHH
Confidence 53221 12234566777888876 7898742 3223667776654430 12344566655544433
Q ss_pred HHhc
Q 020013 213 KLVE 216 (332)
Q Consensus 213 ~~~~ 216 (332)
.+.+
T Consensus 180 ~~~~ 183 (301)
T 3m5v_A 180 DLLA 183 (301)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3443
No 438
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=89.09 E-value=5.3 Score=29.30 Aligned_cols=81 Identities=20% Similarity=0.188 Sum_probs=55.4
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.+...|..+. .+.+.+++.... ...+|.+++.-.-.+ ...+.++..+++ . .++|+|.-.+-.+.+...
T Consensus 20 ~~L~~~~~~v~-~~~~~~~~~~~~~~~~~dlvi~d~~l~~------~~g~~~~~~l~~-~--~~~~ii~~s~~~~~~~~~ 89 (122)
T 1zgz_A 20 SYFTQEGYTVS-VTASGAGLREIMQNQSVDLILLDINLPD------ENGLMLTRALRE-R--STVGIILVTGRSDRIDRI 89 (122)
T ss_dssp HHHHHTTCEEE-EESSHHHHHHHHHHSCCSEEEEESCCSS------SCHHHHHHHHHT-T--CCCEEEEEESSCCHHHHH
T ss_pred HHHHHCCCeEE-EecCHHHHHHHHhcCCCCEEEEeCCCCC------CChHHHHHHHHh-c--CCCCEEEEECCCChhhHH
Confidence 34555677664 566777776554 456899988532111 123567777776 2 268999888887888889
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++.+||+++..
T Consensus 90 ~~~~~ga~~~l~ 101 (122)
T 1zgz_A 90 VGLEMGADDYVT 101 (122)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHhCHHHHcc
Confidence 999999998764
No 439
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=89.07 E-value=3.6 Score=38.22 Aligned_cols=86 Identities=19% Similarity=0.077 Sum_probs=58.3
Q ss_pred HHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc--cCCC----------------------------c-
Q 020013 51 LRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS--WGEY----------------------------S- 99 (332)
Q Consensus 51 ~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~--~g~~----------------------------~- 99 (332)
..+.++.+++.++.|+.+..+.+....+..+.+.+.|+|+|.++ .|.. |
T Consensus 175 ~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt 254 (368)
T 3vkj_A 175 ALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPT 254 (368)
T ss_dssp HHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccH
Confidence 56678888888889999875432223567888899999999883 3310 0
Q ss_pred HHHHHHHHh-C-CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 100 EELVLEAHS-A-GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 100 ~~~i~~~~~-~-g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
...+..+++ . .++|+. .+.+..++.+++..|+|+|.+
T Consensus 255 ~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lGA~~v~i 295 (368)
T 3vkj_A 255 AASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGM 295 (368)
T ss_dssp HHHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 011122222 2 477775 467888999998899999877
No 440
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=88.93 E-value=6.4 Score=36.38 Aligned_cols=105 Identities=11% Similarity=0.063 Sum_probs=71.4
Q ss_pred HHHHHhcCCcEEEEccCCCcH---HHHHHHHhC---CCEEEEecC---CHHHHHHHH----HcCCCEEEEecCCCCcccC
Q 020013 80 IKAILSEKVAVLQVSWGEYSE---ELVLEAHSA---GVKVVPQVG---SFDEARKAV----NAGVDAIIVQGREAGGHVI 146 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~~~~---~~i~~~~~~---g~~v~~~v~---s~~~a~~a~----~~g~D~ivv~G~eaGGh~~ 146 (332)
.+.+.+.|.+.|.++.|..+. +.++.+++. ++++...++ +.+++.... +.|+ + ++-+
T Consensus 153 a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~--iE~P------- 222 (379)
T 2rdx_A 153 LARHRAAGYRQFQIKVGADWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-I--LEQP------- 222 (379)
T ss_dssp HHHHHHTTCCEEEEECCSCHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-E--EECC-------
T ss_pred HHHHHHcCCCEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-E--EeCC-------
Confidence 344567899999998775333 345555542 577877765 677765443 3455 3 3321
Q ss_pred CCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeeccccc
Q 020013 147 GQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 199 (332)
Q Consensus 147 ~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~GT~fl 199 (332)
...+..+.++++.+ ++||++.+.+.+.+++.+++..| +|.|++.-..+
T Consensus 223 --~~~~~~~~~l~~~~---~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~ 271 (379)
T 2rdx_A 223 --CRSYEECQQVRRVA---DQPMKLDECVTGLHMAQRIVADRGAEICCLKISNL 271 (379)
T ss_dssp --SSSHHHHHHHHTTC---CSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTT
T ss_pred --cCCHHHHHHHHhhC---CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEecccc
Confidence 11466677777665 79999999999999999999876 78888855433
No 441
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=88.92 E-value=2.9 Score=38.86 Aligned_cols=105 Identities=10% Similarity=-0.063 Sum_probs=72.0
Q ss_pred HHHHhcCCcEEEEccCC-Cc--HHHHHHHHh---CCCEEEEecC---CHHHHHH----HHHcCCCEEEEecCCCCcccCC
Q 020013 81 KAILSEKVAVLQVSWGE-YS--EELVLEAHS---AGVKVVPQVG---SFDEARK----AVNAGVDAIIVQGREAGGHVIG 147 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~-~~--~~~i~~~~~---~g~~v~~~v~---s~~~a~~----a~~~g~D~ivv~G~eaGGh~~~ 147 (332)
+.+.+.|.+.|-++.|. .+ .+.++.+++ .++++...++ +.+++.. ..+.++++| +-+ -
T Consensus 173 ~~~~~~Gf~~vKik~g~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP-------~ 243 (388)
T 2nql_A 173 KYWQDRGFNAFKFATPVADDGPAAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPWFA--EAP-------V 243 (388)
T ss_dssp HHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCSCE--ECC-------S
T ss_pred HHHHHhCCCEEEEeCCCCChHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEE--ECC-------C
Confidence 44557799999998764 23 355566665 3678887765 6666543 345688876 221 0
Q ss_pred CCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeeccc
Q 020013 148 QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTR 197 (332)
Q Consensus 148 ~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~GT~ 197 (332)
....+..+.++++.+ ++||++.+.+.+.+++.+++..| +|.|++-..
T Consensus 244 ~~~d~~~~~~l~~~~---~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 291 (388)
T 2nql_A 244 WTEDIAGLEKVSKNT---DVPIAVGEEWRTHWDMRARIERCRIAIVQPEMG 291 (388)
T ss_dssp CTTCHHHHHHHHTSC---CSCEEECTTCCSHHHHHHHHTTSCCSEECCCHH
T ss_pred ChhhHHHHHHHHhhC---CCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCC
Confidence 112466677777665 79999999999999999999876 788887433
No 442
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=88.86 E-value=1.1 Score=37.87 Aligned_cols=72 Identities=11% Similarity=0.051 Sum_probs=48.8
Q ss_pred HHHHHHHHcCCCEEEEecCCCCcccCCC-CchhhhHHHHHHHhCCCCCcEEeecCcCCHH-HHHHHHHcCcceeeeccc
Q 020013 121 DEARKAVNAGVDAIIVQGREAGGHVIGQ-DGLISLLPMVVDLIGDRDIPIIAAGGIVDAR-GYVAALSLGAQGICLGTR 197 (332)
Q Consensus 121 ~~a~~a~~~g~D~ivv~G~eaGGh~~~~-~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~-~v~~al~~GA~gV~~GT~ 197 (332)
+.++.+.+.|+|++-+.-.+ |+.... ...+..+.++++.. +.|+.+.+.|.++. .+..+..+|||+|++...
T Consensus 20 ~~~~~~~~~G~~~i~~~~~d--g~~~~~~~~g~~~i~~i~~~~---~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~ 93 (220)
T 2fli_A 20 SELARIEETDAEYVHIDIMD--GQFVPNISFGADVVASMRKHS---KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTE 93 (220)
T ss_dssp HHHHHHHHTTCCEEEEEEEB--SSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEeec--CCCCCccccCHHHHHHHHHhC---CCCEEEEEeecCHHHHHHHHHHcCCCEEEEccC
Confidence 45566778899986543222 331011 11256677777654 68999999998875 478888899999999754
No 443
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=88.84 E-value=5.5 Score=29.23 Aligned_cols=81 Identities=12% Similarity=0.161 Sum_probs=56.0
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..+...|..+. .+.+..++.... ...+|.|++.-.-.+ ...+.++..+++. . ++|++.-.+-.+.....
T Consensus 21 ~~l~~~~~~v~-~~~~~~~a~~~~~~~~~dlvi~D~~l~~------~~g~~~~~~l~~~-~--~~~ii~~s~~~~~~~~~ 90 (123)
T 1xhf_A 21 SIFEAEGYDVF-EATDGAEMHQILSEYDINLVIMDINLPG------KNGLLLARELREQ-A--NVALMFLTGRDNEVDKI 90 (123)
T ss_dssp HHHHTTTCEEE-EESSHHHHHHHHHHSCCSEEEECSSCSS------SCHHHHHHHHHHH-C--CCEEEEEESCCSHHHHH
T ss_pred HHHhhCCcEEE-EeCCHHHHHHHHhcCCCCEEEEcCCCCC------CCHHHHHHHHHhC-C--CCcEEEEECCCChHHHH
Confidence 34455677754 577777776554 457999988432111 1236677777765 2 68998888887888889
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++..||+++..
T Consensus 91 ~~~~~g~~~~l~ 102 (123)
T 1xhf_A 91 LGLEIGADDYIT 102 (123)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHhcCcceEEe
Confidence 999999998754
No 444
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=88.83 E-value=1.4 Score=41.19 Aligned_cols=82 Identities=18% Similarity=0.210 Sum_probs=58.6
Q ss_pred HHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEE--ccCC------CcHHHHHHHHh-CCCEEEE--ecCCH
Q 020013 52 RDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQV--SWGE------YSEELVLEAHS-AGVKVVP--QVGSF 120 (332)
Q Consensus 52 ~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~--~~g~------~~~~~i~~~~~-~g~~v~~--~v~s~ 120 (332)
.+.++++++.++.|+.+..+. ..+.++.+.+.|+|.|.+ +.|. +..+.+..+++ .+.+|+. .+.+.
T Consensus 214 ~~~i~~i~~~~~~Pv~vkgv~---t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~pVia~GGI~~~ 290 (380)
T 1p4c_A 214 WEALRWLRDLWPHKLLVKGLL---SAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLIDSGFRRG 290 (380)
T ss_dssp HHHHHHHHHHCCSEEEEEEEC---CHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCSCEEECSSCCSH
T ss_pred HHHHHHHHHhcCCCEEEEecC---cHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCCeEEEECCCCCH
Confidence 467788888888898876432 256788889999999988 3221 11233444443 3557775 47799
Q ss_pred HHHHHHHHcCCCEEEE
Q 020013 121 DEARKAVNAGVDAIIV 136 (332)
Q Consensus 121 ~~a~~a~~~g~D~ivv 136 (332)
+++.+++..|+|+|.+
T Consensus 291 ~dv~kal~~GAdaV~i 306 (380)
T 1p4c_A 291 SDIVKALALGAEAVLL 306 (380)
T ss_dssp HHHHHHHHTTCSCEEE
T ss_pred HHHHHHHHhCCcHhhe
Confidence 9999999999999988
No 445
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=88.82 E-value=5.8 Score=29.54 Aligned_cols=84 Identities=8% Similarity=-0.075 Sum_probs=55.6
Q ss_pred HHHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH
Q 020013 103 VLEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 103 i~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v 181 (332)
.+.+++.|..+. .+.+.+++.... +..+|.|++.-.-.+ ...+.++.++++.......||+...+-. .+.+
T Consensus 23 ~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlii~d~~l~~------~~g~~~~~~l~~~~~~~~~~ii~~~~~~-~~~~ 94 (132)
T 3lte_A 23 ERVLKRDHWQVE-IAHNGFDAGIKLSTFEPAIMTLDLSMPK------LDGLDVIRSLRQNKVANQPKILVVSGLD-KAKL 94 (132)
T ss_dssp HHHHHHTTCEEE-EESSHHHHHHHHHHTCCSEEEEESCBTT------BCHHHHHHHHHTTTCSSCCEEEEECCSC-SHHH
T ss_pred HHHHHHCCcEEE-EeCCHHHHHHHHHhcCCCEEEEecCCCC------CCHHHHHHHHHhcCccCCCeEEEEeCCC-hHHH
Confidence 344556777665 677777776544 567999998533111 2336777777764321257788888874 4588
Q ss_pred HHHHHcCcceeee
Q 020013 182 VAALSLGAQGICL 194 (332)
Q Consensus 182 ~~al~~GA~gV~~ 194 (332)
.+++.+||+++..
T Consensus 95 ~~~~~~g~~~~l~ 107 (132)
T 3lte_A 95 QQAVTEGADDYLE 107 (132)
T ss_dssp HHHHHHTCCEEEC
T ss_pred HHHHHhChHHHhh
Confidence 8999999998753
No 446
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=88.74 E-value=1.5 Score=38.25 Aligned_cols=56 Identities=14% Similarity=0.221 Sum_probs=46.2
Q ss_pred HHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEE-ecCCHHHHHHHHHcCCCEEEE
Q 020013 81 KAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVP-QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~-~v~s~~~a~~a~~~g~D~ivv 136 (332)
+.+...+++++..+.....+++++.+++.|++|.+ ++.++++++.+.+.|+|+|+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~V~~WTvn~~~~~~~l~~~GVDgIiT 231 (250)
T 3ks6_A 175 ETAIAHSIHEIGVHIDTADAGLMAQVQAAGLDFGCWAAHTPSQITKALDLGVKVFTT 231 (250)
T ss_dssp HHHHHTTCCEEEEEGGGCCHHHHHHHHHTTCEEEEECCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCCEEecchhhCCHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHcCCCEEEc
Confidence 34456788988887555567899999999999875 578899999999999999987
No 447
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.72 E-value=2.1 Score=38.64 Aligned_cols=135 Identities=20% Similarity=0.224 Sum_probs=74.8
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecC--C----HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVG--S----FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~--s----~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. -|.. .+ ++++...+ ..++|+..++ + ++.++.+.+.|+|++.+..+
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 34556667788887764 1221 12 34444444 2578887765 3 45567788999999998655
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-----cCc-CCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-----GGI-VDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRK 213 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-----GGI-~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~ 213 (332)
..-.....+........++.++. ++||+.= -|+ -+++.+.+..+. -.+..-+|+..+-..-..
T Consensus 119 ~y~~~~~s~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~--------pnIvgiKdssgd~~~~~~ 187 (307)
T 3s5o_A 119 CYYRGRMSSAALIHHYTKVADLS---PIPVVLYSVPANTGLDLPVDAVVTLSQH--------PNIVGMXDSGGDVTRIGL 187 (307)
T ss_dssp CTTGGGCCHHHHHHHHHHHHHHC---SSCEEEEECHHHHSCCCCHHHHHHHHTS--------TTEEEEEECSCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHhhc---CCCEEEEeCCcccCCCCCHHHHHHHhcC--------CCEEEEEcCCCCHHHHHH
Confidence 32110012234567777888776 6887742 232 256666665432 234455677655444334
Q ss_pred Hhc-CCCceEE
Q 020013 214 LVE-MDKTEYT 223 (332)
Q Consensus 214 ~~~-~~~t~~t 223 (332)
+.+ ....++.
T Consensus 188 ~~~~~~~~~f~ 198 (307)
T 3s5o_A 188 IVHKTRKQDFQ 198 (307)
T ss_dssp HHHHTTTSSCE
T ss_pred HHHhccCCCeE
Confidence 443 3334444
No 448
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=88.69 E-value=2 Score=38.80 Aligned_cols=125 Identities=18% Similarity=0.208 Sum_probs=70.0
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecC--C----HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVG--S----FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~--s----~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. .|.. .+ ++++...+ ..++|+..++ + ++.++.+.+.|+|++++..+
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44556667788877654 1221 12 23333332 3578887775 3 34566788999999999765
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEee------cCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA------GGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRK 213 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa------GGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~ 213 (332)
..-. ..+........++.++. ++||+.= |---+++.+.+..+. -.+..-+|+..+-.+-..
T Consensus 120 ~y~~--~s~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~--------pnIvgiKdssgd~~~~~~ 186 (304)
T 3l21_A 120 YYSK--PPQRGLQAHFTAVADAT---ELPMLLYDIPGRSAVPIEPDTIRALASH--------PNIVGVXDAKADLHSGAQ 186 (304)
T ss_dssp CSSC--CCHHHHHHHHHHHHTSC---SSCEEEEECHHHHSSCCCHHHHHHHHTS--------TTEEEEEECSCCHHHHHH
T ss_pred CCCC--CCHHHHHHHHHHHHHhc---CCCEEEEeCccccCCCCCHHHHHHHhcC--------CCEEEEECCCCCHHHHHH
Confidence 3211 12234456666777765 7898753 322366666655432 234455666555443333
Q ss_pred Hh
Q 020013 214 LV 215 (332)
Q Consensus 214 ~~ 215 (332)
++
T Consensus 187 ~~ 188 (304)
T 3l21_A 187 IM 188 (304)
T ss_dssp HH
T ss_pred Hh
Confidence 33
No 449
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=88.69 E-value=3.5 Score=31.09 Aligned_cols=76 Identities=11% Similarity=0.063 Sum_probs=54.3
Q ss_pred CEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCc
Q 020013 111 VKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGA 189 (332)
Q Consensus 111 ~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA 189 (332)
..++..+.+.+++.... +..+|.|++.-.-. ....+.++..+++... ++|||+-.+-.+.+.+.+++..||
T Consensus 29 ~~~v~~~~~~~~al~~~~~~~~dlvilD~~lp------~~~g~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~~~ga 100 (133)
T 3b2n_A 29 FEILADTDNGLDAMKLIEEYNPNVVILDIEMP------GMTGLEVLAEIRKKHL--NIKVIIVTTFKRPGYFEKAVVNDV 100 (133)
T ss_dssp EEEEEEESCHHHHHHHHHHHCCSEEEECSSCS------SSCHHHHHHHHHHTTC--SCEEEEEESCCCHHHHHHHHHTTC
T ss_pred cEEEEEcCCHHHHHHHHhhcCCCEEEEecCCC------CCCHHHHHHHHHHHCC--CCcEEEEecCCCHHHHHHHHHcCC
Confidence 45666778887776654 45789999843211 1133677777776432 689999988888889999999999
Q ss_pred ceeee
Q 020013 190 QGICL 194 (332)
Q Consensus 190 ~gV~~ 194 (332)
+++..
T Consensus 101 ~~~l~ 105 (133)
T 3b2n_A 101 DAYVL 105 (133)
T ss_dssp SEEEE
T ss_pred cEEEE
Confidence 98764
No 450
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=88.55 E-value=2.5 Score=37.97 Aligned_cols=133 Identities=14% Similarity=0.175 Sum_probs=74.1
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecC--C----HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVG--S----FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~--s----~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. .|.. .+ ++++...+ ..++|+..++ + ++.++.+.+.|+|++.+..+
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44566677888887764 1221 12 23333322 2478887765 3 34566788999999998665
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-----cCc-CCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-----GGI-VDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRK 213 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-----GGI-~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~ 213 (332)
..-.. .+........++.++. ++||+.= -|+ -+++.+.+..+. -.+..-+|+..+-.+-..
T Consensus 112 ~y~~~--~~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~--------pnivgiKdssgd~~~~~~ 178 (297)
T 3flu_A 112 YYNKP--SQEGIYQHFKTIAEAT---SIPMIIYNVPGRTVVSMTNDTILRLAEI--------PNIVGVKEASGNIGSNIE 178 (297)
T ss_dssp CSSCC--CHHHHHHHHHHHHHHC---CSCEEEEECHHHHSSCCCHHHHHHHTTS--------TTEEEEEECSCCHHHHHH
T ss_pred CCCCC--CHHHHHHHHHHHHHhC---CCCEEEEECCchhccCCCHHHHHHHHcC--------CCEEEEEeCCCCHHHHHH
Confidence 32211 2234566777888876 7888753 233 255665554321 234555677655444444
Q ss_pred HhcCCCceEE
Q 020013 214 LVEMDKTEYT 223 (332)
Q Consensus 214 ~~~~~~t~~t 223 (332)
+.+....++.
T Consensus 179 ~~~~~~~~f~ 188 (297)
T 3flu_A 179 LINRAPEGFV 188 (297)
T ss_dssp HHHHSCTTCE
T ss_pred HHHhcCCCeE
Confidence 4443333333
No 451
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=88.51 E-value=6.7 Score=34.57 Aligned_cols=173 Identities=18% Similarity=0.140 Sum_probs=97.8
Q ss_pred CCcHHHHHHHH-hCCCceeecCCCCCCHHH-HHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEc-----
Q 020013 22 ISGPELVAAVA-NAGGLGLLRAPDWEAPDY-LRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS----- 94 (332)
Q Consensus 22 ~s~~~la~avs-~aGglG~i~~~~~~~~e~-~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~----- 94 (332)
..+|--++.++ .+|+=|+..-.+- +-.. -...+..+++....++++-... .++.++.+++.+|+.|.+-
T Consensus 52 ~PDpv~aA~~ae~aGAdGITvHlRe-DrRHI~d~Dv~~L~~~i~t~lNlEma~---t~emi~ial~~kP~~vtLVPEkre 127 (278)
T 3gk0_A 52 YPDPVRAALAAEDAGADAITLHLRE-DRRHIVDADVRTLRPRVKTRMNLECAV---TPEMLDIACEIRPHDACLVPEKRS 127 (278)
T ss_dssp CSCHHHHHHHHHHTTCSEEEEECCT-TCSSSCHHHHHHHHHHCSSCEEEEECS---SHHHHHHHHHHCCSEEEECCCSGG
T ss_pred CCCHHHHHHHHHHcCCCEEEeccCC-CcccCCHHHHHHHHHHcCCCEEeecCC---CHHHHHHHHHcCCCEEEECCCCCC
Confidence 34665566555 4565565432211 1000 1223455555555666554332 4789999999999999763
Q ss_pred -----cCCC-------cHHHHHHHHhCCCEEEEecC-CHHHHHHHHHcCCCEEEEe-cCCCCcccCC-CCchhhhHHHHH
Q 020013 95 -----WGEY-------SEELVLEAHSAGVKVVPQVG-SFDEARKAVNAGVDAIIVQ-GREAGGHVIG-QDGLISLLPMVV 159 (332)
Q Consensus 95 -----~g~~-------~~~~i~~~~~~g~~v~~~v~-s~~~a~~a~~~g~D~ivv~-G~eaGGh~~~-~~~~~~ll~~i~ 159 (332)
.|.. ..++++++++.|++|-.-+. +++..+.+.+.|+|.|=+. |..+--+... ...-+..+....
T Consensus 128 E~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFIDpd~~qI~aA~~~GAd~IELhTG~YA~a~~~~~~~~el~rl~~aA 207 (278)
T 3gk0_A 128 ELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDEAQIRAAHETGAPVIELHTGRYADAHDAAEQQREFERIATGV 207 (278)
T ss_dssp GBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHTCSEEEECCHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred CcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEEecchhhccCCchhHHHHHHHHHHHH
Confidence 1211 23578889999998765554 6788889999999999772 2211111000 001122222222
Q ss_pred HHhCCCCCcEEeecCcCCHHHHHHHHHc-Ccceeeeccccc
Q 020013 160 DLIGDRDIPIIAAGGIVDARGYVAALSL-GAQGICLGTRFV 199 (332)
Q Consensus 160 ~~~~~~~iPviaaGGI~~~~~v~~al~~-GA~gV~~GT~fl 199 (332)
+.....++-|=+.-|+ |.+|+....+. +-.-+-+|-+++
T Consensus 208 ~~A~~lGL~VnAGHGL-~y~Nv~~ia~ip~i~ElnIGHaiI 247 (278)
T 3gk0_A 208 DAGIALGLKVNAGHGL-HYTNVQAIAALPGIAELNIGHAIV 247 (278)
T ss_dssp HHHHHTTCEEEECTTC-CTTTHHHHHTCTTEEEEEECHHHH
T ss_pred HHHHHcCCEEecCCCC-CHHHHHHHHhCCCCeEEecCHHHH
Confidence 2211136888899999 78998754332 445666665543
No 452
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=88.50 E-value=4.5 Score=29.72 Aligned_cols=84 Identities=11% Similarity=-0.015 Sum_probs=51.2
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.++..|..+. .+.+..++.... +..+|.|++.-.-. ....+.++..+++......+|++.-.+-.+.+...
T Consensus 19 ~~L~~~~~~v~-~~~~~~~a~~~~~~~~~dlvi~D~~l~------~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~ 91 (124)
T 1mb3_A 19 DLLEAQGYETL-QTREGLSALSIARENKPDLILMDIQLP------EISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEE 91 (124)
T ss_dssp HHHHHTTCEEE-EESCHHHHHHHHHHHCCSEEEEESBCS------SSBHHHHHHHHHHSTTTTTSCEEEEC------CHH
T ss_pred HHHHHcCcEEE-EeCCHHHHHHHHhcCCCCEEEEeCCCC------CCCHHHHHHHHHcCccccCCcEEEEECCCCHHHHH
Confidence 34556677765 567777776544 45799999853211 11336677777763211268999888877788888
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++..||+++..
T Consensus 92 ~~~~~g~~~~l~ 103 (124)
T 1mb3_A 92 RIREGGCEAYIS 103 (124)
T ss_dssp HHHHHTCSEEEC
T ss_pred HHHhCCCCEEEe
Confidence 999999998763
No 453
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=88.46 E-value=1.5 Score=37.76 Aligned_cols=76 Identities=20% Similarity=0.134 Sum_probs=51.8
Q ss_pred HHHHHHHHcCCCEEEEe-cC--CCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHH----HcCcceee
Q 020013 121 DEARKAVNAGVDAIIVQ-GR--EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL----SLGAQGIC 193 (332)
Q Consensus 121 ~~a~~a~~~g~D~ivv~-G~--eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al----~~GA~gV~ 193 (332)
.+++.|.+.|+|.|-+. +. .-.|+ ......-+.++++......+|||..=+.-+.+.+..+- .+|||.|-
T Consensus 75 ~e~~~Ai~~GAdevd~vinig~~~~g~---~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVK 151 (220)
T 1ub3_A 75 LEAALACARGADEVDMVLHLGRAKAGD---LDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLK 151 (220)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTC---HHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEecccchhhhCCC---HHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 57888999999998663 22 10111 12335566677776643357888887887888776554 47999999
Q ss_pred eccccc
Q 020013 194 LGTRFV 199 (332)
Q Consensus 194 ~GT~fl 199 (332)
..|.|.
T Consensus 152 TsTGf~ 157 (220)
T 1ub3_A 152 TSTGFG 157 (220)
T ss_dssp CCCSSS
T ss_pred eCCCCC
Confidence 999886
No 454
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=88.43 E-value=5.7 Score=28.87 Aligned_cols=81 Identities=19% Similarity=0.145 Sum_probs=55.0
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..+...|..+. .+.+.+++.... ...+|.+++.-.-. ....+.++..+++.. .+|++.-.+-.+.....
T Consensus 19 ~~l~~~~~~v~-~~~~~~~a~~~~~~~~~dlvl~D~~l~------~~~g~~~~~~l~~~~---~~~ii~~s~~~~~~~~~ 88 (120)
T 2a9o_A 19 FNMTKEGYEVV-TAFNGREALEQFEAEQPDIIILDLMLP------EIDGLEVAKTIRKTS---SVPILMLSAKDSEFDKV 88 (120)
T ss_dssp HHHHHTTCEEE-EESSHHHHHHHHHHHCCSEEEECSSCS------SSCHHHHHHHHHHHC---CCCEEEEESCCSHHHHH
T ss_pred HHHHhcCcEEE-EecCHHHHHHHHHhCCCCEEEEeccCC------CCCHHHHHHHHHhCC---CCCEEEEecCCchHHHH
Confidence 34455677765 567777776544 45799998843211 112356777777632 68988887777888888
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++..||+++..
T Consensus 89 ~~~~~g~~~~l~ 100 (120)
T 2a9o_A 89 IGLELGADDYVT 100 (120)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHhCCHhheEe
Confidence 999999998764
No 455
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=88.38 E-value=2.2 Score=39.37 Aligned_cols=74 Identities=18% Similarity=0.213 Sum_probs=58.0
Q ss_pred HHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHH
Q 020013 101 ELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG 180 (332)
Q Consensus 101 ~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~ 180 (332)
.+.+.+++.|+.++..+-+.+.+..+.+.++|++-+-- +....+.||+.+.+. +.|||..=|.+|-+.
T Consensus 95 ~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S--------~~~~n~~LL~~va~~----gkPviLstGmat~~E 162 (349)
T 2wqp_A 95 KLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGS--------GECNNYPLIKLVASF----GKPIILSTGMNSIES 162 (349)
T ss_dssp HHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECG--------GGTTCHHHHHHHHTT----CSCEEEECTTCCHHH
T ss_pred HHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECc--------ccccCHHHHHHHHhc----CCeEEEECCCCCHHH
Confidence 34455667899999999999999989899999998811 123347788877653 789999999999999
Q ss_pred HHHHHH
Q 020013 181 YVAALS 186 (332)
Q Consensus 181 v~~al~ 186 (332)
+..+..
T Consensus 163 i~~Ave 168 (349)
T 2wqp_A 163 IKKSVE 168 (349)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876654
No 456
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=88.34 E-value=0.63 Score=41.72 Aligned_cols=114 Identities=21% Similarity=0.179 Sum_probs=62.0
Q ss_pred HHHHHhcCCcEEEEc--cCCC-------cH---HHHHHHHh----CCCEEEEec---CCHHH----HHHHHHcCCCEEEE
Q 020013 80 IKAILSEKVAVLQVS--WGEY-------SE---ELVLEAHS----AGVKVVPQV---GSFDE----ARKAVNAGVDAIIV 136 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~--~g~~-------~~---~~i~~~~~----~g~~v~~~v---~s~~~----a~~a~~~g~D~ivv 136 (332)
.+.+++.|++=|.+- .|.. .. +.++.+++ .-+|||... ++.+. .+.+.++|+|+|.-
T Consensus 106 a~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKT 185 (297)
T 4eiv_A 106 AVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQT 185 (297)
T ss_dssp HHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEc
Confidence 455777898877653 2210 01 11222332 235666543 23332 23467899999986
Q ss_pred -ecCCCCcccCCCCchhhhHHHHHHHh----------------C--CCCCcEEee-cCcCCHHHHHHHHHcCcceeeecc
Q 020013 137 -QGREAGGHVIGQDGLISLLPMVVDLI----------------G--DRDIPIIAA-GGIVDARGYVAALSLGAQGICLGT 196 (332)
Q Consensus 137 -~G~eaGGh~~~~~~~~~ll~~i~~~~----------------~--~~~iPviaa-GGI~~~~~v~~al~~GA~gV~~GT 196 (332)
.|+..+|- ......++.+..+.. . +.++-|=++ |||.|.+++.+++.+... +|.
T Consensus 186 STGf~~~gA---T~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~~~~e---lG~ 259 (297)
T 4eiv_A 186 SSGLGATHA---TMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQMIFE---NGP 259 (297)
T ss_dssp CCSSSSCCC---CHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCHHHHHHHHHHHHHH---HCG
T ss_pred CCCCCCCCC---CHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHHHHHHHHHHHHH---hCc
Confidence 45543332 223344444433211 0 126889999 999999999999985433 444
Q ss_pred ccc
Q 020013 197 RFV 199 (332)
Q Consensus 197 ~fl 199 (332)
.++
T Consensus 260 ~wl 262 (297)
T 4eiv_A 260 RSI 262 (297)
T ss_dssp GGC
T ss_pred ccc
Confidence 443
No 457
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.30 E-value=2.6 Score=37.76 Aligned_cols=127 Identities=16% Similarity=0.245 Sum_probs=74.8
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecC--CH----HHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVG--SF----DEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~--s~----~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. -|.. .+ ++++...+ ..++|+..++ +. +.++.+.+.|+|++.+..+
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 45666778899988764 1221 12 23333332 3578887775 33 4556788899999998765
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-----cCc-CCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-----GGI-VDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRK 213 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-----GGI-~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~ 213 (332)
..-.. .+........++.++. ++||+.= .|+ -+++.+.+.... -.+..-+|+..+-.+-+.
T Consensus 107 ~y~~~--~~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~--------pnivgiK~ssgd~~~~~~ 173 (292)
T 3daq_A 107 YYNKT--NQRGLVKHFEAIADAV---KLPVVLYNVPSRTNMTIEPETVEILSQH--------PYIVALKDATNDFEYLEE 173 (292)
T ss_dssp CSSCC--CHHHHHHHHHHHHHHH---CSCEEEEECHHHHSCCCCHHHHHHHHTS--------TTEEEEEECCCCHHHHHH
T ss_pred CCCCC--CHHHHHHHHHHHHHhC---CCCEEEEecccccCCCCCHHHHHHHhcC--------CCEEEEEeCCCCHHHHHH
Confidence 32211 2234567778888887 7888753 233 256666655432 234556777666555455
Q ss_pred HhcC
Q 020013 214 LVEM 217 (332)
Q Consensus 214 ~~~~ 217 (332)
+.+.
T Consensus 174 ~~~~ 177 (292)
T 3daq_A 174 VKKR 177 (292)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 5554
No 458
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=88.25 E-value=1 Score=39.95 Aligned_cols=93 Identities=20% Similarity=0.289 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHHhhcCCcEEE-Eee-----cCCCCHHHHHHHHhcCCcEEEEccCC---CcH---HHHHHHHhCCCEEE
Q 020013 47 APDYLRDLIRKTRSLTERPFGV-GVV-----LAFPHNENIKAILSEKVAVLQVSWGE---YSE---ELVLEAHSAGVKVV 114 (332)
Q Consensus 47 ~~e~~~~~i~~~r~~~~~p~gv-nl~-----~~~~~~~~~~~~~~~~~~~I~~~~g~---~~~---~~i~~~~~~g~~v~ 114 (332)
.|+ +++.++..++. +.++.. +.+ .....+++++.+.+.|.++|.++-|. +.. ++++.+++. .+|+
T Consensus 79 ~~~-l~ekI~l~~~~-gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~-f~Vl 155 (276)
T 1u83_A 79 TKD-LEEKISTLKEH-DITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE-FLVL 155 (276)
T ss_dssp CTT-HHHHHHHHHHT-TCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT-SEEE
T ss_pred hHH-HHHHHHHHHHc-CCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhh-cEEe
Confidence 344 78888777764 222221 101 11123678999999999999998653 222 345555555 7777
Q ss_pred EecCC--------------HHHHHHHHHcCCCEEEEecCCCC
Q 020013 115 PQVGS--------------FDEARKAVNAGVDAIIVQGREAG 142 (332)
Q Consensus 115 ~~v~s--------------~~~a~~a~~~g~D~ivv~G~eaG 142 (332)
..++. ++.++..+++|||.|+++++|+|
T Consensus 156 ~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaRESG 197 (276)
T 1u83_A 156 SEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEARESG 197 (276)
T ss_dssp EECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC-----
T ss_pred eeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeeeccC
Confidence 66541 24566678999999999999976
No 459
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=88.23 E-value=7.6 Score=35.86 Aligned_cols=106 Identities=11% Similarity=0.111 Sum_probs=72.6
Q ss_pred HHHHHhcCCcEEEEccCC-------CcH---HHHHHHHh---CCCEEEEecC---CHHHHHH----HHHcCCCEEEEecC
Q 020013 80 IKAILSEKVAVLQVSWGE-------YSE---ELVLEAHS---AGVKVVPQVG---SFDEARK----AVNAGVDAIIVQGR 139 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~-------~~~---~~i~~~~~---~g~~v~~~v~---s~~~a~~----a~~~g~D~ivv~G~ 139 (332)
++.+.+.|.+.+-++.|. .+. +.++.+++ .++++...++ +.+++.. ..+.++++| +-+
T Consensus 157 a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--E~P 234 (382)
T 1rvk_A 157 AETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLGFDWI--EEP 234 (382)
T ss_dssp HHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTTCSEE--ECC
T ss_pred HHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE--eCC
Confidence 344556799999988775 223 44555555 3678887765 6666643 345678765 322
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCC-HHHHHHHHHcC-cceeeeccc
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVD-ARGYVAALSLG-AQGICLGTR 197 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~-~~~v~~al~~G-A~gV~~GT~ 197 (332)
-+...+..+.++++.+ ++||++.+.+.+ ..++.+++..| +|.|++--.
T Consensus 235 -------~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~ 284 (382)
T 1rvk_A 235 -------MDEQSLSSYKWLSDNL---DIPVVGPESAAGKHWHRAEWIKAGACDILRTGVN 284 (382)
T ss_dssp -------SCTTCHHHHHHHHHHC---SSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHH
T ss_pred -------CChhhHHHHHHHHhhC---CCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCch
Confidence 1112466677777776 799999999999 99999999987 688887443
No 460
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.22 E-value=4.1 Score=30.98 Aligned_cols=80 Identities=13% Similarity=0.015 Sum_probs=55.4
Q ss_pred HHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHH
Q 020013 106 AHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAA 184 (332)
Q Consensus 106 ~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~a 184 (332)
+...|..+. .+.+.+++.... ...+|.|++.-.-.+ ...+.++..+++... .+|||...+-.+.+.+..+
T Consensus 24 L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvllD~~l~~------~~g~~l~~~l~~~~~--~~~ii~ls~~~~~~~~~~~ 94 (137)
T 3cfy_A 24 VKDEPYDIF-HVETGRDAIQFIERSKPQLIILDLKLPD------MSGEDVLDWINQNDI--PTSVIIATAHGSVDLAVNL 94 (137)
T ss_dssp TTTSSSEEE-EESSHHHHHHHHHHHCCSEEEECSBCSS------SBHHHHHHHHHHTTC--CCEEEEEESSCCHHHHHHH
T ss_pred HHhcCceEE-EeCCHHHHHHHHHhcCCCEEEEecCCCC------CCHHHHHHHHHhcCC--CCCEEEEEecCcHHHHHHH
Confidence 444577654 677777776654 457999998532111 123667777776432 6899988888788889999
Q ss_pred HHcCcceeee
Q 020013 185 LSLGAQGICL 194 (332)
Q Consensus 185 l~~GA~gV~~ 194 (332)
+..||+++..
T Consensus 95 ~~~ga~~~l~ 104 (137)
T 3cfy_A 95 IQKGAEDFLE 104 (137)
T ss_dssp HHTTCSEEEE
T ss_pred HHCCccEEEe
Confidence 9999998764
No 461
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=88.20 E-value=7 Score=30.05 Aligned_cols=83 Identities=8% Similarity=0.023 Sum_probs=55.7
Q ss_pred HHhCCC-EEEEecCCHHHHHHHHH--------cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcC
Q 020013 106 AHSAGV-KVVPQVGSFDEARKAVN--------AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIV 176 (332)
Q Consensus 106 ~~~~g~-~v~~~v~s~~~a~~a~~--------~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~ 176 (332)
++..|. ..+..+.+.+++..... ..+|.|++.=.-. ....+.++..+++.....++|||+-.+-.
T Consensus 28 L~~~~~~~~v~~~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp------~~~g~~l~~~l~~~~~~~~~piiils~~~ 101 (149)
T 1i3c_A 28 LKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLP------KKDGREVLAEIKQNPDLKRIPVVVLTTSH 101 (149)
T ss_dssp HHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCS------SSCHHHHHHHHHHCTTTTTSCEEEEESCC
T ss_pred HHhcCCCccEEEeCCHHHHHHHHHhccccccCCCCCEEEEeCCCC------CCcHHHHHHHHHhCcCcCCCeEEEEECCC
Confidence 444454 24556778888877665 3689999842211 11336777777764211268998888887
Q ss_pred CHHHHHHHHHcCcceeee
Q 020013 177 DARGYVAALSLGAQGICL 194 (332)
Q Consensus 177 ~~~~v~~al~~GA~gV~~ 194 (332)
+.+.+.+++..||++...
T Consensus 102 ~~~~~~~~~~~ga~~~l~ 119 (149)
T 1i3c_A 102 NEDDVIASYELHVNCYLT 119 (149)
T ss_dssp CHHHHHHHHHTTCSEEEE
T ss_pred ChHHHHHHHHcCCcEEEE
Confidence 888999999999998764
No 462
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=88.13 E-value=4.4 Score=34.28 Aligned_cols=99 Identities=11% Similarity=0.092 Sum_probs=60.9
Q ss_pred HHHHHhcCCcEEEEcc-CCCc---HHHHHHHHhCCCE---EEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchh
Q 020013 80 IKAILSEKVAVLQVSW-GEYS---EELVLEAHSAGVK---VVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLI 152 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~-g~~~---~~~i~~~~~~g~~---v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~ 152 (332)
++.+++.|+++|++-. +..+ .++++.+++.+.+ ++.. +....+.+.|+|+|-+.+. . ..
T Consensus 35 ~~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~~~~~l~v~----~~~~~a~~~gad~v~l~~~--------~-~~- 100 (221)
T 1yad_A 35 IIITIQNEVDFIHIRERSKSAADILKLLDLIFEGGIDKRKLVMN----GRVDIALFSTIHRVQLPSG--------S-FS- 100 (221)
T ss_dssp HHHHHGGGCSEEEECCTTSCHHHHHHHHHHHHHTTCCGGGEEEE----SCHHHHHTTTCCEEEECTT--------S-CC-
T ss_pred HHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHhcCcCCeEEEe----ChHHHHHHcCCCEEEeCCC--------c-cC-
Confidence 5566778999998742 1222 2456666665443 4433 2345677899999987211 1 11
Q ss_pred hhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccc
Q 020013 153 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 153 ~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~f 198 (332)
+..+++..+ ++ +....+.+.+++.++...|+|.|.+|+.|
T Consensus 101 --~~~~~~~~~--~~--~ig~sv~t~~~~~~a~~~gaD~i~~~~~f 140 (221)
T 1yad_A 101 --PKQIRARFP--HL--HIGRSVHSLEEAVQAEKEDADYVLFGHVF 140 (221)
T ss_dssp --HHHHHHHCT--TC--EEEEEECSHHHHHHHHHTTCSEEEEECCC
T ss_pred --HHHHHHHCC--CC--EEEEEcCCHHHHHHHHhCCCCEEEECCcc
Confidence 233333321 23 33346789999999999999999998853
No 463
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=88.09 E-value=1.5 Score=37.32 Aligned_cols=101 Identities=21% Similarity=0.225 Sum_probs=61.7
Q ss_pred HHHHHHHhcCCcEEEEcc--CCC--c---HHHHHHHH----hCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccC
Q 020013 78 ENIKAILSEKVAVLQVSW--GEY--S---EELVLEAH----SAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVI 146 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~~--g~~--~---~~~i~~~~----~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~ 146 (332)
+.++.+.+.|+++|++.. +.+ . .++++.++ ..++.++.. +.+..+.+.|+|+|.+ |. .
T Consensus 35 ~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~----~~~~~a~~~gad~v~l-~~----~-- 103 (227)
T 2tps_A 35 TVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPFIVN----DDVELALNLKADGIHI-GQ----E-- 103 (227)
T ss_dssp HHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEE----SCHHHHHHHTCSEEEE-CT----T--
T ss_pred HHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEc----CHHHHHHHcCCCEEEE-CC----C--
Confidence 467778889999998863 211 1 23343333 347777664 2345677889999987 22 1
Q ss_pred CCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccc
Q 020013 147 GQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 147 ~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~f 198 (332)
... +.++++.. +. ++..-.+.+.+++.++...|+|.+.+|+-|
T Consensus 104 -~~~----~~~~~~~~---g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~ 146 (227)
T 2tps_A 104 -DAN----AKEVRAAI---GD-MILGVSAHTMSEVKQAEEDGADYVGLGPIY 146 (227)
T ss_dssp -SSC----HHHHHHHH---TT-SEEEEEECSHHHHHHHHHHTCSEEEECCSS
T ss_pred -ccC----HHHHHHhc---CC-cEEEEecCCHHHHHHHHhCCCCEEEECCCc
Confidence 111 34444444 22 222222468888888889999999987654
No 464
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=88.06 E-value=7.1 Score=29.52 Aligned_cols=85 Identities=12% Similarity=-0.029 Sum_probs=57.7
Q ss_pred HHHHhCCCE-EEEecCCHHHHHHHHH------cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHh--CCCCCcEEeecC
Q 020013 104 LEAHSAGVK-VVPQVGSFDEARKAVN------AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLI--GDRDIPIIAAGG 174 (332)
Q Consensus 104 ~~~~~~g~~-v~~~v~s~~~a~~a~~------~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~--~~~~iPviaaGG 174 (332)
..++..|.. .+..+.+.+++..... ..+|.|++.-.-.+ ...+.++..+++.. ...++|+|...+
T Consensus 27 ~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~------~~g~~~~~~l~~~~~~~~~~~~ii~~t~ 100 (146)
T 3ilh_A 27 TIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPG------INGWELIDLFKQHFQPMKNKSIVCLLSS 100 (146)
T ss_dssp HHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSS------SCHHHHHHHHHHHCGGGTTTCEEEEECS
T ss_pred HHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCC------CCHHHHHHHHHHhhhhccCCCeEEEEeC
Confidence 334455652 4556778888876554 56999998533111 23467788887721 112689888888
Q ss_pred cCCHHHHHHHHHcC-cceeee
Q 020013 175 IVDARGYVAALSLG-AQGICL 194 (332)
Q Consensus 175 I~~~~~v~~al~~G-A~gV~~ 194 (332)
-.+.+....++..| ++++..
T Consensus 101 ~~~~~~~~~~~~~g~~~~~l~ 121 (146)
T 3ilh_A 101 SLDPRDQAKAEASDWVDYYVS 121 (146)
T ss_dssp SCCHHHHHHHHHCSSCCEEEC
T ss_pred CCChHHHHHHHhcCCcceeee
Confidence 87899999999999 998763
No 465
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=88.03 E-value=2.1 Score=38.30 Aligned_cols=126 Identities=15% Similarity=0.265 Sum_probs=71.0
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecC--C----HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVG--S----FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~--s----~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. .|.. .+ ++++...+ ..++|+..++ + ++.++.+.+.|+|++.+..+
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTP 105 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 44566677888887654 1221 12 23333322 2478887765 3 34566788999999998765
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-----cCc-CCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-----GGI-VDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRK 213 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-----GGI-~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~ 213 (332)
-.-.. .+........++.++. ++||+.= .|+ -+++.+.+.... -.+..-+|+..+-..-..
T Consensus 106 ~y~~~--~~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~--------pnivgiK~ssgd~~~~~~ 172 (291)
T 3tak_A 106 YYNKP--TQEGLYQHYKAIAEAV---ELPLILYNVPGRTGVDLSNDTAVRLAEI--------PNIVGIKDATGDVPRGKA 172 (291)
T ss_dssp CSSCC--CHHHHHHHHHHHHHHC---CSCEEEEECHHHHSCCCCHHHHHHHTTS--------TTEEEEEECSCCHHHHHH
T ss_pred CCCCC--CHHHHHHHHHHHHHhc---CCCEEEEecccccCCCCCHHHHHHHHcC--------CCEEEEEeCCCCHHHHHH
Confidence 32211 2234567777888876 7888753 233 256665554321 134455676655444344
Q ss_pred Hhc
Q 020013 214 LVE 216 (332)
Q Consensus 214 ~~~ 216 (332)
+.+
T Consensus 173 ~~~ 175 (291)
T 3tak_A 173 LID 175 (291)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 466
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=87.93 E-value=5.9 Score=35.02 Aligned_cols=120 Identities=18% Similarity=0.203 Sum_probs=73.6
Q ss_pred CccceecCCCCCC-----CCcHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHH
Q 020013 9 FEYGIVQAPLGPD-----ISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAI 83 (332)
Q Consensus 9 ~~~Pii~apM~~g-----~s~~~la~avs~aGglG~i~~~~~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~ 83 (332)
.+.||+. |... .....++..+.++|.=|++.. . .++++..+.++.+++. +.. .+-++.+....+.++.+
T Consensus 90 ~~~Pii~--m~y~n~v~~~g~~~f~~~~~~aG~dGviv~-D-l~~ee~~~~~~~~~~~-gl~-~i~liap~s~~eri~~i 163 (271)
T 1ujp_A 90 TEKPLFL--MTYLNPVLAWGPERFFGLFKQAGATGVILP-D-LPPDEDPGLVRLAQEI-GLE-TVFLLAPTSTDARIATV 163 (271)
T ss_dssp CCSCEEE--ECCHHHHHHHCHHHHHHHHHHHTCCEEECT-T-CCGGGCHHHHHHHHHH-TCE-EECEECTTCCHHHHHHH
T ss_pred CCCCEEE--EecCcHHHHhhHHHHHHHHHHcCCCEEEec-C-CCHHHHHHHHHHHHHc-CCc-eEEEeCCCCCHHHHHHH
Confidence 3568884 5310 022467777888898889875 3 3556667777777654 221 22233333335666666
Q ss_pred HhcCCcEEEEc--c---C------CCcHHHHHHHHhC-CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 84 LSEKVAVLQVS--W---G------EYSEELVLEAHSA-GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 84 ~~~~~~~I~~~--~---g------~~~~~~i~~~~~~-g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
.+....++... . | .+..++++++++. +++++. .+++++++.++ .++|++||
T Consensus 164 a~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIV 228 (271)
T 1ujp_A 164 VRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVV 228 (271)
T ss_dssp HTTCCSCEEEECC------------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEE
T ss_pred HHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEE
Confidence 66555544221 0 1 1234678888875 567764 47789999996 89999999
No 467
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=87.91 E-value=4 Score=33.79 Aligned_cols=77 Identities=18% Similarity=0.137 Sum_probs=56.0
Q ss_pred CCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC
Q 020013 110 GVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 188 (332)
Q Consensus 110 g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G 188 (332)
+..++..+.+.+++.... ...+|.|+++-.-.+ ...+.++..+++... ++||+.-.+-.+.+.+..++.+|
T Consensus 30 ~~~vv~~~~~~~~al~~~~~~~~dlvllD~~lp~------~~g~~~~~~lr~~~~--~~~ii~ls~~~~~~~~~~~~~~G 101 (215)
T 1a04_A 30 DITVVGEASNGEQGIELAESLDPDLILLDLNMPG------MNGLETLDKLREKSL--SGRIVVFSVSNHEEDVVTALKRG 101 (215)
T ss_dssp TEEEEEEESSHHHHHHHHHHHCCSEEEEETTSTT------SCHHHHHHHHHHSCC--CSEEEEEECCCCHHHHHHHHHTT
T ss_pred CcEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCC------CcHHHHHHHHHHhCC--CCcEEEEECCCCHHHHHHHHHcC
Confidence 366667788888877654 457999998533111 133677788776532 68998888888899999999999
Q ss_pred cceeee
Q 020013 189 AQGICL 194 (332)
Q Consensus 189 A~gV~~ 194 (332)
|+++..
T Consensus 102 a~~~l~ 107 (215)
T 1a04_A 102 ADGYLL 107 (215)
T ss_dssp CSEEEE
T ss_pred CcEEEe
Confidence 998764
No 468
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=87.88 E-value=14 Score=32.61 Aligned_cols=174 Identities=17% Similarity=0.224 Sum_probs=95.0
Q ss_pred cceecCCCCCCCCcHHHHHHHHh----CC----CceeecC------CC-----CC--CHHHHHHHHHHHHhhcCCcEEEE
Q 020013 11 YGIVQAPLGPDISGPELVAAVAN----AG----GLGLLRA------PD-----WE--APDYLRDLIRKTRSLTERPFGVG 69 (332)
Q Consensus 11 ~Pii~apM~~g~s~~~la~avs~----aG----glG~i~~------~~-----~~--~~e~~~~~i~~~r~~~~~p~gvn 69 (332)
.-+|.||-+ +.+++.+...++ .+ +++++.- ++ +. ..+.=.+++.++++..+.|+..-
T Consensus 4 l~viaGPCs--ie~~~~~~~~A~~l~~~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~l~~~~~e~Glp~~te 81 (267)
T 2nwr_A 4 FLVIAGPNA--IESEELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSIHSFRGHGLEYGVKALRKVKEEFGLKITTD 81 (267)
T ss_dssp EEEEEECSB--CSCHHHHHHHHHHHHHHHHHCTTEEEEEECBSCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCEEEEE
T ss_pred cEEEEcCCC--cCCHHHHHHHHHHHHHHHHhhcCccEEEeeccccCCCCCCCCCcCccHHHHHHHHHHHHHhcCCeEEEe
Confidence 347788875 777776655543 22 3555432 11 11 11222233444544456666665
Q ss_pred eecCCCCHHHHHHHHhcCCcEEEEcc-CCCcHHHHHHHHhCCCEEEEecC---CHHHHHHHH----HcCC-CEEEEe-cC
Q 020013 70 VVLAFPHNENIKAILSEKVAVLQVSW-GEYSEELVLEAHSAGVKVVPQVG---SFDEARKAV----NAGV-DAIIVQ-GR 139 (332)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~I~~~~-g~~~~~~i~~~~~~g~~v~~~v~---s~~~a~~a~----~~g~-D~ivv~-G~ 139 (332)
++- ...++.+.+ .+|+++++. +....++.+.+-..+.+|+.+-+ ++++...+. ..|- |.+++. |.
T Consensus 82 ~~d----~~~~~~l~~-~vd~~~IgA~~~rn~~ll~~~a~~~~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~rG~ 156 (267)
T 2nwr_A 82 IHE----SWQAEPVAE-VADIIQIPAFLCRQTDLLLAAAKTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGT 156 (267)
T ss_dssp CSS----GGGHHHHHT-TCSEEEECGGGTTCHHHHHHHHTTTSEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCE
T ss_pred cCC----HHhHHHHHh-cCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 442 456666666 699999974 22334577777777899886643 556555443 4564 666663 22
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEee---------------cCcCC--HHHHHHHHHcCcceeeecccc
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA---------------GGIVD--ARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa---------------GGI~~--~~~v~~al~~GA~gV~~GT~f 198 (332)
.. +.. .....+..++.+++. + ||+.. +|-.. ..-..++.++||+|+++=+-|
T Consensus 157 ~~-~y~-~~~~dl~~i~~lk~~----~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mIE~H~ 225 (267)
T 2nwr_A 157 TF-GYN-NLVVDFRSLPIMKQW----A-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHP 225 (267)
T ss_dssp EC-SSS-CEECCTTHHHHHTTT----S-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEEEEES
T ss_pred CC-CCC-ccccCHHHHHHHHHc----C-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEEEecC
Confidence 11 110 001235556665442 5 99885 34110 122446778999999985554
No 469
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=87.84 E-value=3.8 Score=36.87 Aligned_cols=125 Identities=20% Similarity=0.301 Sum_probs=72.2
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecCC------HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVGS------FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~s------~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. .|.. .+ ++++...+ ..++|+..+++ ++.++.+.+.|+|++.+..+
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45666777889888764 1221 11 23333332 24888877763 44566788999999998665
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-----cCc-CCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-----GGI-VDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRK 213 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-----GGI-~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~ 213 (332)
-.-. ..+........++.++. ++||+.= -|+ -+++.+.+..+. -.+..-+|+..+-.+-..
T Consensus 121 ~y~~--~~~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~--------pnIvgiKdssgd~~~~~~ 187 (304)
T 3cpr_A 121 YYSK--PSQEGLLAHFGAIAAAT---EVPICLYDIPGRSGIPIESDTMRRLSEL--------PTILAVXDAKGDLVAATS 187 (304)
T ss_dssp CSSC--CCHHHHHHHHHHHHHHC---CSCEEEEECHHHHSSCCCHHHHHHHTTS--------TTEEEEEECSCCHHHHHH
T ss_pred CCCC--CCHHHHHHHHHHHHHhc---CCCEEEEeCccccCcCCCHHHHHHHHcC--------CCEEEEecCCCCHHHHHH
Confidence 3211 12234566777888776 6888762 243 266766665322 235556677655443333
Q ss_pred Hh
Q 020013 214 LV 215 (332)
Q Consensus 214 ~~ 215 (332)
+.
T Consensus 188 ~~ 189 (304)
T 3cpr_A 188 LI 189 (304)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 470
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=87.79 E-value=2.1 Score=39.90 Aligned_cols=89 Identities=16% Similarity=0.098 Sum_probs=66.3
Q ss_pred HHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHH
Q 020013 101 ELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG 180 (332)
Q Consensus 101 ~~i~~~~~~g~~v~~~v~s~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~ 180 (332)
.+.+.+++.|+.++..+-+.+.+..+.+.++|++-+-- +....+.||..+.+. +.|||..=|.+|-+.
T Consensus 105 ~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~KIgS--------~~~~N~pLL~~va~~----gKPViLStGmaTl~E 172 (385)
T 1vli_A 105 PLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIAS--------YEINHLPLLKYVARL----NRPMIFSTAGAEISD 172 (385)
T ss_dssp HHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECG--------GGTTCHHHHHHHHTT----CSCEEEECTTCCHHH
T ss_pred HHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEEECc--------ccccCHHHHHHHHhc----CCeEEEECCCCCHHH
Confidence 45566778899999999999999888899999998821 123447788877653 789999999999999
Q ss_pred HHHHHH----cCcceeee--ccccccC
Q 020013 181 YVAALS----LGAQGICL--GTRFVAS 201 (332)
Q Consensus 181 v~~al~----~GA~gV~~--GT~fl~t 201 (332)
+..+.. .|..-|.+ +++-.-+
T Consensus 173 i~~Ave~i~~~Gn~~iiLlhc~s~YPt 199 (385)
T 1vli_A 173 VHEAWRTIRAEGNNQIAIMHCVAKYPA 199 (385)
T ss_dssp HHHHHHHHHTTTCCCEEEEEECSSSSC
T ss_pred HHHHHHHHHHCCCCcEEEEeccCCCCC
Confidence 877664 57654554 4444433
No 471
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=87.78 E-value=1.8 Score=39.16 Aligned_cols=105 Identities=16% Similarity=0.211 Sum_probs=60.6
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecC--C----HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVG--S----FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~--s----~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++..++.|++.+.+. -|.. .+ ++++...+ ..++|+..++ + ++.++.+.+.|+|++.+..+
T Consensus 33 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 112 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPP 112 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44566677888877664 1221 11 23333332 2478887765 3 34566788999999999665
Q ss_pred CCCc-ccCCCCchhhhHHHHHHHhCCCCCcEEee----cCc-CCHHHHHHHH
Q 020013 140 EAGG-HVIGQDGLISLLPMVVDLIGDRDIPIIAA----GGI-VDARGYVAAL 185 (332)
Q Consensus 140 eaGG-h~~~~~~~~~ll~~i~~~~~~~~iPviaa----GGI-~~~~~v~~al 185 (332)
-.+. ....+.........+.++. ++||+.= -|+ -+++.+.+..
T Consensus 113 yy~~~~~~s~~~l~~~f~~va~a~---~lPiilYn~P~tg~~l~~~~~~~La 161 (309)
T 3fkr_A 113 YHGATFRVPEAQIFEFYARVSDAI---AIPIMVQDAPASGTALSAPFLARMA 161 (309)
T ss_dssp CBTTTBCCCHHHHHHHHHHHHHHC---SSCEEEEECGGGCCCCCHHHHHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHhc---CCCEEEEeCCCCCCCCCHHHHHHHH
Confidence 3321 1112335567777888876 5776642 232 2566666655
No 472
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.77 E-value=2.3 Score=38.59 Aligned_cols=127 Identities=15% Similarity=0.182 Sum_probs=73.8
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecC--C----HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVG--S----FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~--s----~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. .|.. .+ ++++...+ ..++|+..++ + ++.++.+.+.|+|++.+..+
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 45666778899988764 1221 12 23333322 2478887775 3 34556788999999998765
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEee------cCcCCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA------GGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRK 213 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa------GGI~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~~ 213 (332)
-.-. ..+........++.++. ++||+.= |---+++.+.+..+. -.+..-+|+..+-.+-..
T Consensus 128 ~y~~--~s~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~--------pnIvgiKdssgd~~~~~~ 194 (314)
T 3qze_A 128 YYNK--PTQEGMYQHFRHIAEAV---AIPQILYNVPGRTSCDMLPETVERLSKV--------PNIIGIKEATGDLQRAKE 194 (314)
T ss_dssp CSSC--CCHHHHHHHHHHHHHHS---CSCEEEEECHHHHSCCCCHHHHHHHHTS--------TTEEEEEECSCCHHHHHH
T ss_pred CCCC--CCHHHHHHHHHHHHHhc---CCCEEEEeCccccCCCCCHHHHHHHhcC--------CCEEEEEcCCCCHHHHHH
Confidence 3221 12234567777888877 7888763 322266666665432 134455677655444444
Q ss_pred HhcC
Q 020013 214 LVEM 217 (332)
Q Consensus 214 ~~~~ 217 (332)
+++.
T Consensus 195 ~~~~ 198 (314)
T 3qze_A 195 VIER 198 (314)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 473
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=87.76 E-value=1.9 Score=33.05 Aligned_cols=83 Identities=13% Similarity=0.061 Sum_probs=58.0
Q ss_pred HHHHHhCCCEEEEecCCHHHHHHHHH--cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHH
Q 020013 103 VLEAHSAGVKVVPQVGSFDEARKAVN--AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG 180 (332)
Q Consensus 103 i~~~~~~g~~v~~~v~s~~~a~~a~~--~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~ 180 (332)
.+.+.+.|..+. .+.+.+++..... ..+|.|++.-.-..| ...+.++..+++. + ++|||+-.+-.+.+.
T Consensus 22 ~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~-----~~g~~~~~~l~~~-~--~~~ii~ls~~~~~~~ 92 (140)
T 3h5i_A 22 ANILNKYGYTVE-IALTGEAAVEKVSGGWYPDLILMDIELGEG-----MDGVQTALAIQQI-S--ELPVVFLTAHTEPAV 92 (140)
T ss_dssp HHHHHHTTCEEE-EESSHHHHHHHHHTTCCCSEEEEESSCSSS-----CCHHHHHHHHHHH-C--CCCEEEEESSSSCCC
T ss_pred HHHHHHcCCEEE-EecChHHHHHHHhcCCCCCEEEEeccCCCC-----CCHHHHHHHHHhC-C--CCCEEEEECCCCHHH
Confidence 344566787766 5778888877664 468999986432111 2336777777765 2 789998888878788
Q ss_pred HHHHHHcCcceeee
Q 020013 181 YVAALSLGAQGICL 194 (332)
Q Consensus 181 v~~al~~GA~gV~~ 194 (332)
+.+++.+||+++..
T Consensus 93 ~~~~~~~g~~~~l~ 106 (140)
T 3h5i_A 93 VEKIRSVTAYGYVM 106 (140)
T ss_dssp CGGGGGSCEEEEEE
T ss_pred HHHHHhCCCcEEEe
Confidence 88889999988653
No 474
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=87.71 E-value=3.5 Score=36.89 Aligned_cols=126 Identities=16% Similarity=0.152 Sum_probs=73.0
Q ss_pred HHHHHHHh-cCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecCC------HHHHHHHHHcCCCEEEEec
Q 020013 78 ENIKAILS-EKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVGS------FDEARKAVNAGVDAIIVQG 138 (332)
Q Consensus 78 ~~~~~~~~-~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~s------~~~a~~a~~~g~D~ivv~G 138 (332)
..++.+++ .|++.+.+. .|.. .+ ++++...+ ..++|+..+++ ++.++.+.+.|+|++.+..
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 45666777 888887764 1221 11 23333332 35888877763 4456678889999999866
Q ss_pred CCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe-----ecCc-CCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHH
Q 020013 139 REAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA-----AGGI-VDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKR 212 (332)
Q Consensus 139 ~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia-----aGGI-~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~ 212 (332)
+..-.. .+........++.++. ++||+. ..|+ -+++.+.+..+. -.+..-+|+..+-..-+
T Consensus 108 P~y~~~--~~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~--------pnIvgiK~s~gd~~~~~ 174 (293)
T 1f6k_A 108 PFYYKF--SFPEIKHYYDTIIAET---GSNMIVYSIPFLTGVNMGIEQFGELYKN--------PKVLGVKFTAGDFYLLE 174 (293)
T ss_dssp CCSSCC--CHHHHHHHHHHHHHHH---CCCEEEEECHHHHCCCCCHHHHHHHHTS--------TTEEEEEECSCCHHHHH
T ss_pred CCCCCC--CHHHHHHHHHHHHHhC---CCCEEEEECccccCcCCCHHHHHHHhcC--------CCEEEEEECCCCHHHHH
Confidence 532111 2234566777888877 688776 2343 267777665432 23445566665544433
Q ss_pred HHhc
Q 020013 213 KLVE 216 (332)
Q Consensus 213 ~~~~ 216 (332)
.+.+
T Consensus 175 ~~~~ 178 (293)
T 1f6k_A 175 RLKK 178 (293)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 475
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=87.70 E-value=3.2 Score=31.59 Aligned_cols=85 Identities=15% Similarity=0.053 Sum_probs=57.0
Q ss_pred HHHHhCCC-EEEEecCCHHHHHHHHH-------cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCc
Q 020013 104 LEAHSAGV-KVVPQVGSFDEARKAVN-------AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGI 175 (332)
Q Consensus 104 ~~~~~~g~-~v~~~v~s~~~a~~a~~-------~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI 175 (332)
+.++..|. ..+..+.+.+++..... ..+|.|++.-.-. ....+.++..+++.....++|+|+-.+-
T Consensus 25 ~~L~~~g~~~~v~~~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l~------~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 98 (143)
T 2qvg_A 25 RVFHKISSLIKIEIAKSGNQALDMLYGRNKENKIHPKLILLDINIP------KMNGIEFLKELRDDSSFTDIEVFVLTAA 98 (143)
T ss_dssp HHHHHHCTTCCEEEESSHHHHHHHHHTCTTCCCCCCSEEEEETTCT------TSCHHHHHHHHTTSGGGTTCEEEEEESC
T ss_pred HHHHHhCCCceEEEECCHHHHHHHHHhcccccCCCCCEEEEecCCC------CCCHHHHHHHHHcCccccCCcEEEEeCC
Confidence 34455555 23446778888887765 4699999853211 1233667777765421126899988888
Q ss_pred CCHHHHHHHHHcCcceeee
Q 020013 176 VDARGYVAALSLGAQGICL 194 (332)
Q Consensus 176 ~~~~~v~~al~~GA~gV~~ 194 (332)
.+.+....++.+|++++..
T Consensus 99 ~~~~~~~~~~~~g~~~~l~ 117 (143)
T 2qvg_A 99 YTSKDKLAFESLNIRGHLI 117 (143)
T ss_dssp CCHHHHHHHTTTTCCEEEE
T ss_pred CCHHHHHHHHhcCCCeEEE
Confidence 7888999999999998764
No 476
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=87.66 E-value=4.9 Score=30.48 Aligned_cols=81 Identities=15% Similarity=0.134 Sum_probs=56.1
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..+...|..+. .+.+.+++.... ...+|.|++.-.- .....+.++..+++.. .+|||.-.+-.+.+.+.
T Consensus 22 ~~L~~~g~~v~-~~~~~~~al~~~~~~~~dlvllD~~l------~~~~g~~l~~~l~~~~---~~~ii~ls~~~~~~~~~ 91 (136)
T 2qzj_A 22 GFLEEKGISID-LAYNCEEAIGKIFSNKYDLIFLEIIL------SDGDGWTLCKKIRNVT---TCPIVYMTYINEDQSIL 91 (136)
T ss_dssp HHHHTTTCEEE-EESSHHHHHHHHHHCCCSEEEEESEE------TTEEHHHHHHHHHTTC---CCCEEEEESCCCHHHHH
T ss_pred HHHHHCCCEEE-EECCHHHHHHHHHhcCCCEEEEeCCC------CCCCHHHHHHHHccCC---CCCEEEEEcCCCHHHHH
Confidence 34455677654 677877776654 4568999884221 1112366777777543 68999888887888999
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++..||+++..
T Consensus 92 ~~~~~ga~~~l~ 103 (136)
T 2qzj_A 92 NALNSGGDDYLI 103 (136)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHcCCcEEEE
Confidence 999999998764
No 477
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=87.57 E-value=1.9 Score=33.13 Aligned_cols=80 Identities=20% Similarity=0.150 Sum_probs=51.6
Q ss_pred HHhC-CCEEEEecCCHHHHHHHH-Hc-CCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecC--cCCHHH
Q 020013 106 AHSA-GVKVVPQVGSFDEARKAV-NA-GVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGG--IVDARG 180 (332)
Q Consensus 106 ~~~~-g~~v~~~v~s~~~a~~a~-~~-g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGG--I~~~~~ 180 (332)
+++. |..++..+.+.+++.... +. .+|.|++.=.-.+ ...+.++..+++.. ..|++.-.+ -.+.+.
T Consensus 33 L~~~~~~~~v~~~~~~~~al~~l~~~~~~dlvilD~~l~~------~~g~~~~~~lr~~~---~~~iiil~~~~~~~~~~ 103 (145)
T 3kyj_B 33 IKTLPDFKVVAQAANGQEALDKLAAQPNVDLILLDIEMPV------MDGMEFLRHAKLKT---RAKICMLSSVAVSGSPH 103 (145)
T ss_dssp HTTCTTEEEEEEESSHHHHHHHHHHCTTCCEEEECTTSCC------CTTCHHHHHHHHHC---CCEEC-CBSSCSTTSSH
T ss_pred HHhCCCceEEEEECCHHHHHHHHhcCCCCCEEEEeCCCCC------CCHHHHHHHHHhcC---CCCeEEEEEeccCChHH
Confidence 3444 677777888998887755 44 5999998532111 12256777777654 456555444 445667
Q ss_pred HHHHHHcCcceeee
Q 020013 181 YVAALSLGAQGICL 194 (332)
Q Consensus 181 v~~al~~GA~gV~~ 194 (332)
+.+++..||+++..
T Consensus 104 ~~~~~~~ga~~~l~ 117 (145)
T 3kyj_B 104 AARARELGADGVVA 117 (145)
T ss_dssp HHHHHHTTCSCCCB
T ss_pred HHHHHhCCCCEEEe
Confidence 78899999987753
No 478
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=87.51 E-value=1.6 Score=39.42 Aligned_cols=56 Identities=29% Similarity=0.405 Sum_probs=46.5
Q ss_pred HHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEE-ecCCHHHHHHHHHcCCCEEEE
Q 020013 81 KAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVP-QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 81 ~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~-~v~s~~~a~~a~~~g~D~ivv 136 (332)
+.+...+++++..++....+++++.+++.|++|.+ +|.+.++++.+.+.|+|+|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTVn~~~~~~~l~~~GVDgIiT 295 (313)
T 3l12_A 239 QAVASAGGQLWCPYFLDVTPELVAEAHDLGLIVLTWTVNEPEDIRRMATTGVDGIVT 295 (313)
T ss_dssp HHHHHHTCSEEEEBGGGCCHHHHHHHHHTTCEEEEBCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhCCcEEecchhcCCHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHcCCCEEEe
Confidence 34455678999887655567899999999999875 578899999999999999987
No 479
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=87.48 E-value=4.1 Score=30.29 Aligned_cols=84 Identities=17% Similarity=0.096 Sum_probs=55.6
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHHH-cCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAVN-AGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~~-~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..++..|...+..+.+.+++..... ..+|.|++.-.- .....+.++..+++.....++|++.-.+-.+.+.+.
T Consensus 24 ~~L~~~g~~~v~~~~~~~~a~~~~~~~~~dlvl~D~~l------~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~ 97 (129)
T 1p6q_A 24 DALQQLGFKQITAAGDGEQGMKIMAQNPHHLVISDFNM------PKMDGLGLLQAVRANPATKKAAFIILTAQGDRALVQ 97 (129)
T ss_dssp HHHHTTTCSCEECCSSHHHHHHHHHTSCCSEEEECSSS------CSSCHHHHHHHHTTCTTSTTCEEEECCSCCCHHHHH
T ss_pred HHHHHCCCcEEEecCCHHHHHHHHHcCCCCEEEEeCCC------CCCCHHHHHHHHhcCccccCCCEEEEeCCCCHHHHH
Confidence 3445556645556778888776654 468999884221 111235677777653111268999888888888889
Q ss_pred HHHHcCcceee
Q 020013 183 AALSLGAQGIC 193 (332)
Q Consensus 183 ~al~~GA~gV~ 193 (332)
.++..|++++.
T Consensus 98 ~~~~~g~~~~l 108 (129)
T 1p6q_A 98 KAAALGANNVL 108 (129)
T ss_dssp HHHHHTCSCEE
T ss_pred HHHHcCCCEEE
Confidence 99999998765
No 480
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=87.47 E-value=4.5 Score=29.54 Aligned_cols=81 Identities=16% Similarity=0.211 Sum_probs=53.9
Q ss_pred HHHHhCCCEEEEecCCHHHHHHH-HHcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKA-VNAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a-~~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
+.+...|..+. .+.+..++... ....+|.+++.-.-. ....+.++..+++. ..+|++.-.+-.+.+...
T Consensus 19 ~~l~~~~~~v~-~~~~~~~~~~~~~~~~~dlvi~D~~l~------~~~g~~~~~~l~~~---~~~~ii~~s~~~~~~~~~ 88 (121)
T 1zh2_A 19 TALEGDGMRVF-EAETLQRGLLEAATRKPDLIILDLGLP------DGDGIEFIRDLRQW---SAVPVIVLSARSEESDKI 88 (121)
T ss_dssp HHHHTTTCEEE-EESSHHHHHHHHHHHCCSEEEEESEET------TEEHHHHHHHHHTT---CCCCEEEEESCCSHHHHH
T ss_pred HHHhcCCCEEE-EeCCHHHHHHHHhcCCCCEEEEeCCCC------CCcHHHHHHHHHhC---CCCcEEEEECCCCHHHHH
Confidence 34455677655 56666666544 345799998853211 11235677777642 268988888877888889
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
.++..|++++..
T Consensus 89 ~~~~~g~~~~l~ 100 (121)
T 1zh2_A 89 AALDAGADDYLS 100 (121)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHhcCCCeEEe
Confidence 999999998754
No 481
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=87.43 E-value=8.1 Score=29.52 Aligned_cols=83 Identities=23% Similarity=0.251 Sum_probs=53.7
Q ss_pred HHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHh--CCCCCcEEeecCcCCHHHH
Q 020013 105 EAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLI--GDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 105 ~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~--~~~~iPviaaGGI~~~~~v 181 (332)
.+.+.|..+. .+.+.+++.... ...+|.|++.-.-.+ ...+.++..+++.. ....+|+|+-.+-.+.+.+
T Consensus 33 ~L~~~g~~v~-~~~~~~~al~~~~~~~~dlvl~D~~mp~------~~g~~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~ 105 (143)
T 3m6m_D 33 LLEKAGHKVL-CVNGAEQVLDAMAEEDYDAVIVDLHMPG------MNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAI 105 (143)
T ss_dssp HHHC--CEEE-EESSHHHHHHHHHHSCCSEEEEESCCSS------SCHHHHHHHHHHHHHTTCCCCCEEEEESCCCHHHH
T ss_pred HHHHcCCeEE-EeCCHHHHHHHHhcCCCCEEEEeCCCCC------CCHHHHHHHHHhchhccCCCCeEEEEeCCCCHHHH
Confidence 3445566654 467777776554 457999998533111 12356777776431 1125899888888788999
Q ss_pred HHHHHcCcceeee
Q 020013 182 VAALSLGAQGICL 194 (332)
Q Consensus 182 ~~al~~GA~gV~~ 194 (332)
.+++.+||++...
T Consensus 106 ~~~~~~Ga~~~l~ 118 (143)
T 3m6m_D 106 RACEQAGARAFLA 118 (143)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHHcChhheee
Confidence 9999999998753
No 482
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=87.33 E-value=14 Score=32.30 Aligned_cols=170 Identities=14% Similarity=0.076 Sum_probs=97.2
Q ss_pred CCCcHHHHHHHHhCCCceeec--CCC-CCCHHHHHHHHHHHHhhcCCcEEEEeecCCCCHHHHHHHHhcCCcEEEEccCC
Q 020013 21 DISGPELVAAVANAGGLGLLR--APD-WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE 97 (332)
Q Consensus 21 g~s~~~la~avs~aGglG~i~--~~~-~~~~e~~~~~i~~~r~~~~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~g~ 97 (332)
.+.+|+.+..+..+|. .++. ... -.+.+.++..+..+.. .+.+.-|-+. ..+...++.+++.+++.|.+..=.
T Consensus 25 ~~~~p~~~e~a~~~Ga-D~v~lDlE~~~~~~~~~~~~~~a~~~-~~~~~~VRv~--~~~~~~i~~~l~~g~~~I~~P~V~ 100 (267)
T 2vws_A 25 SSTTAYMAEIAATSGY-DWLLIDGEHAPNTIQDLYHQLQAVAP-YASQPVIRPV--EGSKPLIKQVLDIGAQTLLIPMVD 100 (267)
T ss_dssp CSCCHHHHHHHHTTCC-SEEEEETTTSCCCHHHHHHHHHHHTT-SSSEEEEECS--SCCHHHHHHHHHTTCCEEEECCCC
T ss_pred eCCCHHHHHHHHhCCC-CEEEEcCCCCCCCHHHHHHHHHHHHh-CCCcEEEEeC--CCCHHHHHHHHHhCCCEEEeCCCC
Confidence 3678988888877774 3332 221 1234555555554432 2344444433 234567888889999999887533
Q ss_pred CcHHHHHHHHh---------------------------------CCCEEEEecCCHHHHHHHH---H-cCCCEEEEecC-
Q 020013 98 YSEELVLEAHS---------------------------------AGVKVVPQVGSFDEARKAV---N-AGVDAIIVQGR- 139 (332)
Q Consensus 98 ~~~~~i~~~~~---------------------------------~g~~v~~~v~s~~~a~~a~---~-~g~D~ivv~G~- 139 (332)
.+.+ ++.+.+ ..+.++..+-+++-+..+. . .|+|++.+-..
T Consensus 101 s~ee-~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eIa~~~gvd~l~iG~~D 179 (267)
T 2vws_A 101 TAEQ-ARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPAD 179 (267)
T ss_dssp SHHH-HHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHHHTSTTCCEEEECHHH
T ss_pred CHHH-HHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHHhCCCCCCEEEEChHH
Confidence 2333 333211 1267888888876554332 2 47999988221
Q ss_pred ---CCCcccCCC--CchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcCcceeeecccc
Q 020013 140 ---EAGGHVIGQ--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 198 (332)
Q Consensus 140 ---eaGGh~~~~--~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~GA~gV~~GT~f 198 (332)
+- |+.+.. ......+.++....+..++|+.... .|++.+..++.+|.+.+.+|+-.
T Consensus 180 L~~~l-g~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~--~d~~~a~~~~~~G~~~~s~~~d~ 240 (267)
T 2vws_A 180 LSASL-GYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLA--VAPDMAQQCLAWGANFVAVGVDT 240 (267)
T ss_dssp HHHHT-TCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEEC--SSHHHHHHHHHTTCCEEEEEEHH
T ss_pred HHHHh-CCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEec--CCHHHHHHHHHCCCCEEEEchHH
Confidence 11 222111 1233444555444322256654432 38899999999999999998753
No 483
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=87.25 E-value=2.4 Score=36.99 Aligned_cols=58 Identities=19% Similarity=0.185 Sum_probs=47.1
Q ss_pred HHHHHHhcCCcEEEEccCCCcHHHHHHHHhCCCEEEE-ec----CCHHHHHHHHHcCCCEEEE
Q 020013 79 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVP-QV----GSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~~g~~~~~~i~~~~~~g~~v~~-~v----~s~~~a~~a~~~g~D~ivv 136 (332)
.+..+...+++.|..+.....+++++.+++.|++|+. ++ .+.++.+.+.+.|+|+|+.
T Consensus 181 ~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~G~~v~~wTv~~~~n~~~~~~~l~~~GvdgI~T 243 (258)
T 2o55_A 181 FVEQACYGDANGVSMLFHYLTKEQVCTAHEKGLSVTVWMPWIFDDSEEDWKKCLELQVDLICS 243 (258)
T ss_dssp HHHHHHHTTCSEEEEEGGGCCHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhcCCeEEecChhhcCHHHHHHHHHCCCEEEEeeCCCCCCCHHHHHHHHHcCCCEEEe
Confidence 3344667789999887655567899999999999875 46 7889999999999999986
No 484
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=87.21 E-value=5.1 Score=35.71 Aligned_cols=103 Identities=21% Similarity=0.294 Sum_probs=62.9
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecCC------HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVGS------FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~s------~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. -|.. .+ ++++...+ ..++|+..+++ ++.++.+.+.|+|++.+..+
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45666777899988764 1221 11 23333332 24888877763 44566788899999998665
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-----cCc-CCHHHHHHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-----GGI-VDARGYVAAL 185 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-----GGI-~~~~~v~~al 185 (332)
..-. ..+........++.++. ++||+.= .|+ -+++.+.+..
T Consensus 105 ~y~~--~s~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 105 YYNK--PTQEGLRKHFGKVAESI---NLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp CSSC--CCHHHHHHHHHHHHHHC---SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred CCCC--CCHHHHHHHHHHHHHhc---CCCEEEEeCccccCcCCCHHHHHHHH
Confidence 3211 12234566777788776 6888762 243 2677777665
No 485
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=87.13 E-value=4.6 Score=43.99 Aligned_cols=91 Identities=12% Similarity=0.042 Sum_probs=63.8
Q ss_pred CCHHHHHHHHHHHHhhc-CCcEEEEeecCCCCHHHHHHHHhcCCcEEEEcc---C-------------CCcHHHH----H
Q 020013 46 EAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW---G-------------EYSEELV----L 104 (332)
Q Consensus 46 ~~~e~~~~~i~~~r~~~-~~p~gvnl~~~~~~~~~~~~~~~~~~~~I~~~~---g-------------~~~~~~i----~ 104 (332)
.+++.+.+.+..+|+.+ ++|++|.+............+.++|+|+|.+.. | .+....+ +
T Consensus 975 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~ 1054 (1479)
T 1ea0_A 975 YSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQ 1054 (1479)
T ss_dssp SSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHH
Confidence 46788889999999886 789999887643323455667889999998741 1 1111222 2
Q ss_pred HHHhC----CCEEEE--ecCCHHHHHHHHHcCCCEEEE
Q 020013 105 EAHSA----GVKVVP--QVGSFDEARKAVNAGVDAIIV 136 (332)
Q Consensus 105 ~~~~~----g~~v~~--~v~s~~~a~~a~~~g~D~ivv 136 (332)
.+++. .++|+. .+.+..++.+++..|||+|-+
T Consensus 1055 al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~i 1092 (1479)
T 1ea0_A 1055 VLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGI 1092 (1479)
T ss_dssp HHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEEC
T ss_pred HHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeE
Confidence 23322 477775 477999999999999999976
No 486
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=87.11 E-value=4.3 Score=36.29 Aligned_cols=126 Identities=22% Similarity=0.234 Sum_probs=73.3
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecCC------HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVGS------FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~s------~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. .|.. .+ ++++...+ ..++|+..+++ ++.++.+.+.|+|++.+..+
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45666777889988764 1221 11 23333332 24888877763 44566788999999998655
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-----cCc-CCHHHHHHHH-HcCcceeeeccccccCccCCCCHHHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-----GGI-VDARGYVAAL-SLGAQGICLGTRFVASEESYAHPEYKR 212 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-----GGI-~~~~~v~~al-~~GA~gV~~GT~fl~t~Es~~~~~~k~ 212 (332)
..-. ..+........++.++. ++||+.= .|+ -+++.+.+.. +. -.+..-+|+..+-..-.
T Consensus 105 ~y~~--~s~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~~--------pnivgiKds~gd~~~~~ 171 (294)
T 2ehh_A 105 YYNK--PTQRGLYEHFKTVAQEV---DIPIIIYNIPSRTCVEISVDTMFKLASEC--------ENIVASKESTPNMDRIS 171 (294)
T ss_dssp CSSC--CCHHHHHHHHHHHHHHC---CSCEEEEECHHHHSCCCCHHHHHHHHHHC--------TTEEEEEECCSCHHHHH
T ss_pred CCCC--CCHHHHHHHHHHHHHhc---CCCEEEEeCCcccCcCCCHHHHHHHHhhC--------CCEEEEEeCCCCHHHHH
Confidence 3211 12234566777788776 7898762 343 2677777765 33 22445567765544433
Q ss_pred HHhc
Q 020013 213 KLVE 216 (332)
Q Consensus 213 ~~~~ 216 (332)
.+.+
T Consensus 172 ~~~~ 175 (294)
T 2ehh_A 172 EIVK 175 (294)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3433
No 487
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=87.10 E-value=6.2 Score=36.70 Aligned_cols=106 Identities=10% Similarity=0.081 Sum_probs=72.2
Q ss_pred HHHHHhcCCcEEEEccCCC-cH---HHHHHHHh---CCCEEEEecC---CHHHHHH----HHHcCCCEEEEecCCCCccc
Q 020013 80 IKAILSEKVAVLQVSWGEY-SE---ELVLEAHS---AGVKVVPQVG---SFDEARK----AVNAGVDAIIVQGREAGGHV 145 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~~-~~---~~i~~~~~---~g~~v~~~v~---s~~~a~~----a~~~g~D~ivv~G~eaGGh~ 145 (332)
+..+.+.|.+.|-++.|.. +. +.++.+++ .++++...++ +.+++.. ..+.|+++| +-+
T Consensus 157 a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP------ 228 (391)
T 2qgy_A 157 IEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWI--EEP------ 228 (391)
T ss_dssp HHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCSEE--ECS------
T ss_pred HHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeE--eCC------
Confidence 3445667999999886643 23 44555655 3577877765 6666643 345688865 322
Q ss_pred CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeeccc
Q 020013 146 IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTR 197 (332)
Q Consensus 146 ~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~GT~ 197 (332)
-+...+..+.++++.+ ++||++.+.+.+.+++.+++..| +|.|++-..
T Consensus 229 -~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 277 (391)
T 2qgy_A 229 -VDGENISLLTEIKNTF---NMKVVTGEKQSGLVHFRELISRNAADIFNPDIS 277 (391)
T ss_dssp -SCTTCHHHHHHHHHHC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCBTT
T ss_pred -CChhhHHHHHHHHhhC---CCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcc
Confidence 1113466677787776 79999999999999999999887 688887433
No 488
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=87.07 E-value=2.1 Score=38.91 Aligned_cols=135 Identities=16% Similarity=0.189 Sum_probs=73.4
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecC--C----HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVG--S----FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~--s----~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. -|.. .+ ++++...+ ..++|+..++ + ++.++.+.+.|+|++++..+
T Consensus 36 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 115 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPP 115 (318)
T ss_dssp HHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 45666778899988764 1221 12 23333332 3578887775 3 44566788999999999655
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEe------ecCc-CCHHHHHHHHH-cCcceeeeccccccCccCCCCHHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA------AGGI-VDARGYVAALS-LGAQGICLGTRFVASEESYAHPEYK 211 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia------aGGI-~~~~~v~~al~-~GA~gV~~GT~fl~t~Es~~~~~~k 211 (332)
-.-.....+.........+.++. ++||+. ..|+ -+++.+.+... .. .+..-+|+..+-..-
T Consensus 116 ~y~~kp~~~~~l~~~f~~ia~a~---~lPiilYn~P~~t~g~~l~~~~~~~La~~~p--------nIvgiKdssgd~~~~ 184 (318)
T 3qfe_A 116 AYFGKATTPPVIKSFFDDVSCQS---PLPVVIYNFPGVCNGIDLDSDMITTIARKNP--------NVVGVKLTCASVGKI 184 (318)
T ss_dssp CC---CCCHHHHHHHHHHHHHHC---SSCEEEEECCC----CCCCHHHHHHHHHHCT--------TEEEEEESSCCHHHH
T ss_pred cccCCCCCHHHHHHHHHHHHhhC---CCCEEEEeCCcccCCCCCCHHHHHHHHhhCC--------CEEEEEeCCCCHHHH
Confidence 22110001234566777888876 688764 2354 26677766654 32 234456665554333
Q ss_pred HHHhc-CCCceEE
Q 020013 212 RKLVE-MDKTEYT 223 (332)
Q Consensus 212 ~~~~~-~~~t~~t 223 (332)
..+.+ ....++.
T Consensus 185 ~~~~~~~~~~~f~ 197 (318)
T 3qfe_A 185 TRLAATLPPAAFS 197 (318)
T ss_dssp HHHHHHSCGGGCE
T ss_pred HHHHHhcCCCCEE
Confidence 33333 3333443
No 489
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=86.98 E-value=3.5 Score=30.34 Aligned_cols=85 Identities=11% Similarity=0.034 Sum_probs=56.2
Q ss_pred HHHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH
Q 020013 103 VLEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 103 i~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v 181 (332)
.+.++..|..+. .+.+.+++.... +..+|.|++.-.-.+ ....+.++..+++.....++|||+- +-.+.+..
T Consensus 22 ~~~L~~~g~~v~-~~~~~~~a~~~~~~~~~dlvi~d~~~~~-----~~~g~~~~~~l~~~~~~~~~~ii~~-~~~~~~~~ 94 (127)
T 2gkg_A 22 RSALEGRGFTVD-ETTDGKGSVEQIRRDRPDLVVLAVDLSA-----GQNGYLICGKLKKDDDLKNVPIVII-GNPDGFAQ 94 (127)
T ss_dssp HHHHHHHTCEEE-EECCHHHHHHHHHHHCCSEEEEESBCGG-----GCBHHHHHHHHHHSTTTTTSCEEEE-ECGGGHHH
T ss_pred HHHHHhcCceEE-EecCHHHHHHHHHhcCCCEEEEeCCCCC-----CCCHHHHHHHHhcCccccCCCEEEE-ecCCchhH
Confidence 344555677765 677777776654 456999998532110 1133677777776521126899888 76678888
Q ss_pred HHHHHcCcceeee
Q 020013 182 VAALSLGAQGICL 194 (332)
Q Consensus 182 ~~al~~GA~gV~~ 194 (332)
..++..|++++..
T Consensus 95 ~~~~~~g~~~~l~ 107 (127)
T 2gkg_A 95 HRKLKAHADEYVA 107 (127)
T ss_dssp HHHSTTCCSEEEE
T ss_pred HHHHHhCcchhee
Confidence 8999999988653
No 490
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=86.97 E-value=2.3 Score=39.36 Aligned_cols=86 Identities=19% Similarity=0.147 Sum_probs=57.6
Q ss_pred HHHHHHHHHhhc--CCcEEEEeecCCC-------C---HHHHHHHHhcCCcEEEEccCC----------C--cHHHHHHH
Q 020013 51 LRDLIRKTRSLT--ERPFGVGVVLAFP-------H---NENIKAILSEKVAVLQVSWGE----------Y--SEELVLEA 106 (332)
Q Consensus 51 ~~~~i~~~r~~~--~~p~gvnl~~~~~-------~---~~~~~~~~~~~~~~I~~~~g~----------~--~~~~i~~~ 106 (332)
+.+.++.+|+.. +.|+++-+-.... . .+.++.+.+.|+|+|+++.+. + ..++++.+
T Consensus 211 ~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~i 290 (363)
T 3l5l_A 211 LLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERV 290 (363)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHH
Confidence 567778888765 4688886654210 1 123456677899999987431 1 12455666
Q ss_pred Hh-CCCEEEEe--cCCHHHHHHHHHcC-CCEEEE
Q 020013 107 HS-AGVKVVPQ--VGSFDEARKAVNAG-VDAIIV 136 (332)
Q Consensus 107 ~~-~g~~v~~~--v~s~~~a~~a~~~g-~D~ivv 136 (332)
++ .+++|+.. +.+.+++..+++.| +|.|.+
T Consensus 291 r~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 291 RREAKLPVTSAWGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp HHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEEC
T ss_pred HHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEe
Confidence 55 36777753 56899999999998 999876
No 491
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=86.97 E-value=3.5 Score=33.89 Aligned_cols=82 Identities=16% Similarity=0.089 Sum_probs=58.5
Q ss_pred HHHHhCCCEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHH
Q 020013 104 LEAHSAGVKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 182 (332)
Q Consensus 104 ~~~~~~g~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~ 182 (332)
..+...|..++..+.+.+++.... ...+|.|++.-.-.+ ...+.++..+++.. ..|||+-.+-.+.+.+.
T Consensus 31 ~~L~~~g~~v~~~~~~~~~al~~~~~~~~dlvi~D~~~p~------~~g~~~~~~l~~~~---~~pii~lt~~~~~~~~~ 101 (205)
T 1s8n_A 31 EMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPR------RDGIDAASEIASKR---IAPIVVLTAFSQRDLVE 101 (205)
T ss_dssp HHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEESSCSS------SCHHHHHHHHHHTT---CSCEEEEEEGGGHHHHH
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHhhcCCCEEEEeCCCCC------CChHHHHHHHHhcC---CCCEEEEecCCCHHHHH
Confidence 345567888877788888877654 457999998532111 13367777777654 46988888887888888
Q ss_pred HHHHcCcceeee
Q 020013 183 AALSLGAQGICL 194 (332)
Q Consensus 183 ~al~~GA~gV~~ 194 (332)
+++..||+++..
T Consensus 102 ~~~~~ga~~~l~ 113 (205)
T 1s8n_A 102 RARDAGAMAYLV 113 (205)
T ss_dssp TTGGGSCEEEEE
T ss_pred HHHhcCCcEEEe
Confidence 999999998764
No 492
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=86.95 E-value=1.3 Score=33.67 Aligned_cols=82 Identities=10% Similarity=-0.020 Sum_probs=56.7
Q ss_pred HHHHhCC-CEEEEecCCHHHHHHHH-HcCCCEEEEecCCCCcccCCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHH
Q 020013 104 LEAHSAG-VKVVPQVGSFDEARKAV-NAGVDAIIVQGREAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 181 (332)
Q Consensus 104 ~~~~~~g-~~v~~~v~s~~~a~~a~-~~g~D~ivv~G~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v 181 (332)
+.+++.| ..+. .+.+.+++.... +..+|.|++.-.-.+ ...+.++..+++... ++|||+-.+-.+.+..
T Consensus 32 ~~L~~~g~~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~------~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~ 102 (135)
T 3snk_A 32 TRLDALAIYDVR-VSETDDFLKGPPADTRPGIVILDLGGGD------LLGKPGIVEARALWA--TVPLIAVSDELTSEQT 102 (135)
T ss_dssp HHHHHTSSEEEE-EECGGGGGGCCCTTCCCSEEEEEEETTG------GGGSTTHHHHHGGGT--TCCEEEEESCCCHHHH
T ss_pred HHHhhcCCeEEE-EeccHHHHHHHHhccCCCEEEEeCCCCC------chHHHHHHHHHhhCC--CCcEEEEeCCCCHHHH
Confidence 3455667 6655 566666665433 456899998533211 123567777777653 6899998888899999
Q ss_pred HHHHHcCcceeee
Q 020013 182 VAALSLGAQGICL 194 (332)
Q Consensus 182 ~~al~~GA~gV~~ 194 (332)
.+++.+||+++..
T Consensus 103 ~~~~~~g~~~~l~ 115 (135)
T 3snk_A 103 RVLVRMNASDWLH 115 (135)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHHcCcHhhcc
Confidence 9999999998764
No 493
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=86.92 E-value=3.6 Score=36.50 Aligned_cols=120 Identities=18% Similarity=0.252 Sum_probs=68.0
Q ss_pred HHHHHHhcCCcEEEEc-------cCCCcHHHH----HHHHhCCCEEEEecC-CHHHH-------------HHHHHcCC--
Q 020013 79 NIKAILSEKVAVLQVS-------WGEYSEELV----LEAHSAGVKVVPQVG-SFDEA-------------RKAVNAGV-- 131 (332)
Q Consensus 79 ~~~~~~~~~~~~I~~~-------~g~~~~~~i----~~~~~~g~~v~~~v~-s~~~a-------------~~a~~~g~-- 131 (332)
..+.+.+.|+++|.++ |+. ..+.+ +.+.+.|+.++..|+ +.++- +..+..++
T Consensus 104 S~~mLkd~G~~~VIiGHSERR~~f~E-tde~V~~Kv~~Al~~GL~pIlCVGEtleeRe~g~t~~vv~~Ql~~~l~~~~~~ 182 (275)
T 3kxq_A 104 SAFMLKEAGASHVIIGHSERRTVYQE-SDAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQLEGSLPDGATA 182 (275)
T ss_dssp CHHHHHHHTCSEEEESCHHHHHHTCC-CHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHSCTTCCT
T ss_pred CHHHHHHcCCCEEEECchhhccccCC-CHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHCCCHHHHHHHHHHHHHcCCccc
Confidence 4567788999999985 454 34444 556678999888887 33221 11111122
Q ss_pred -CEEEEe-cCCCCcc--cCCCC---chhhhHHHHHHH-hC--CCCCcEEeecCcCCHHHHHHHHHc-Ccceeeecccccc
Q 020013 132 -DAIIVQ-GREAGGH--VIGQD---GLISLLPMVVDL-IG--DRDIPIIAAGGIVDARGYVAALSL-GAQGICLGTRFVA 200 (332)
Q Consensus 132 -D~ivv~-G~eaGGh--~~~~~---~~~~ll~~i~~~-~~--~~~iPviaaGGI~~~~~v~~al~~-GA~gV~~GT~fl~ 200 (332)
..||+. ..-+-|. +..+. .....|++.... .. ..+++|+-.|.+ +++|+.+.++. ..||+.+|.+-|.
T Consensus 183 ~~vVIAYEPVWAIGTGktAt~e~aqevh~~IR~~l~~~~~~~a~~~rIlYGGSV-~~~Na~el~~~~dIDG~LVGgASL~ 261 (275)
T 3kxq_A 183 ENIIIAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFGDEGAKIRLLYGGSV-KPSNAFELLSTAHVNGALIGGASLK 261 (275)
T ss_dssp TTEEEEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEECSCC-CTTTHHHHHTSTTCCEEEESGGGSS
T ss_pred CCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhhhhhcccceEEEcCCc-CHhHHHHHHcCCccceEEeehhhcC
Confidence 355553 2223332 11110 112223322111 00 026899999999 89999999975 7899999988553
No 494
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=86.90 E-value=1.9 Score=39.09 Aligned_cols=127 Identities=17% Similarity=0.137 Sum_probs=72.3
Q ss_pred HHHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecC--C----HHHHHHHHHcCCCEEEEec
Q 020013 77 NENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVG--S----FDEARKAVNAGVDAIIVQG 138 (332)
Q Consensus 77 ~~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~--s----~~~a~~a~~~g~D~ivv~G 138 (332)
...++.+++.|++.+.+. .|.. .+ ++++...+ ..++|+..++ + ++.++.+.+.|+|++.+..
T Consensus 48 ~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 48 GRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 345667778899988764 1221 12 23333332 2477887765 3 3456678899999999965
Q ss_pred CCCCcccCCCCchhhhHHHHHHHhCCCCCcEEe------ecCcCCHHHHHHH-HHcCcceeeeccccccCccCCCCHHHH
Q 020013 139 REAGGHVIGQDGLISLLPMVVDLIGDRDIPIIA------AGGIVDARGYVAA-LSLGAQGICLGTRFVASEESYAHPEYK 211 (332)
Q Consensus 139 ~eaGGh~~~~~~~~~ll~~i~~~~~~~~iPvia------aGGI~~~~~v~~a-l~~GA~gV~~GT~fl~t~Es~~~~~~k 211 (332)
+-.-.. .+........++.++. ++||+. .|---+++.+.+. .+.. .+..-+|+..+-..-
T Consensus 128 P~y~~~--s~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~L~a~~p--------nIvgiKdssgd~~~~ 194 (315)
T 3na8_A 128 ISYWKL--NEAEVFQHYRAVGEAI---GVPVMLYNNPGTSGIDMSVELILRIVREVD--------NVTMVKESTGDIQRM 194 (315)
T ss_dssp CCSSCC--CHHHHHHHHHHHHHHC---SSCEEEEECHHHHSCCCCHHHHHHHHHHST--------TEEEEEECSSCHHHH
T ss_pred CCCCCC--CHHHHHHHHHHHHHhC---CCcEEEEeCcchhCcCCCHHHHHHHHhcCC--------CEEEEECCCCCHHHH
Confidence 532211 2234567777888876 688774 2222256666665 3321 234456665554443
Q ss_pred HHHhc
Q 020013 212 RKLVE 216 (332)
Q Consensus 212 ~~~~~ 216 (332)
+.+++
T Consensus 195 ~~~~~ 199 (315)
T 3na8_A 195 HKLRL 199 (315)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 34444
No 495
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=86.90 E-value=5.7 Score=35.69 Aligned_cols=126 Identities=14% Similarity=0.147 Sum_probs=74.1
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecCC------HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVGS------FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~s------~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. -|.. .+ ++++...+ ..++|+..+++ ++.++.+.+.|+|++.+..+
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 45666777889988764 1221 11 23333332 35888887763 44566788899999998665
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCC-CcEEee-----cCc-CCHHHHHHHHHcCcceeeeccccccCccCCCCHHHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRD-IPIIAA-----GGI-VDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKR 212 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~-iPviaa-----GGI-~~~~~v~~al~~GA~gV~~GT~fl~t~Es~~~~~~k~ 212 (332)
..-. ..+........++.++. + +||+.= .|+ -+++.+.+.... -.+..-+|+..+-..-+
T Consensus 116 ~y~~--~s~~~l~~~f~~va~a~---~~lPiilYn~P~~tg~~l~~~~~~~La~~--------pnIvgiK~s~gd~~~~~ 182 (303)
T 2wkj_A 116 FYYP--FSFEEHCDHYRAIIDSA---DGLPMVVYNIPALSGVKLTLDQINTLVTL--------PGVGALXQTSGDLYQME 182 (303)
T ss_dssp CSSC--CCHHHHHHHHHHHHHHH---TTCCEEEEECHHHHCCCCCHHHHHHHHTS--------TTEEEEEECCCCHHHHH
T ss_pred CCCC--CCHHHHHHHHHHHHHhC---CCCCEEEEeCccccCCCCCHHHHHHHhcC--------CCEEEEeCCCCCHHHHH
Confidence 3211 12234566777888877 5 898762 343 266776665432 23555667766544433
Q ss_pred HHhc
Q 020013 213 KLVE 216 (332)
Q Consensus 213 ~~~~ 216 (332)
.+.+
T Consensus 183 ~~~~ 186 (303)
T 2wkj_A 183 QIRR 186 (303)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 496
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=86.89 E-value=7.7 Score=32.78 Aligned_cols=100 Identities=18% Similarity=0.056 Sum_probs=60.2
Q ss_pred hcCCcEEEEccCC---CcHHHHHHHHhC--CCEEEEec---CC-HHHHHHHHHcCCCEEEEecCCCCcccCCCCchhhhH
Q 020013 85 SEKVAVLQVSWGE---YSEELVLEAHSA--GVKVVPQV---GS-FDEARKAVNAGVDAIIVQGREAGGHVIGQDGLISLL 155 (332)
Q Consensus 85 ~~~~~~I~~~~g~---~~~~~i~~~~~~--g~~v~~~v---~s-~~~a~~a~~~g~D~ivv~G~eaGGh~~~~~~~~~ll 155 (332)
+.++|++.+++-. .-.++++.+++. +.+++..+ .. ...++.+.++|+|+|++.... +......++
T Consensus 29 ~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~------~~~~~~~~~ 102 (218)
T 3jr2_A 29 ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAA------HIATIAACK 102 (218)
T ss_dssp GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTS------CHHHHHHHH
T ss_pred cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCC------CHHHHHHHH
Confidence 4468888776210 012578888775 66776432 12 245678889999999995431 001112344
Q ss_pred HHHHHHhCCCCCcEEe-ecCcCCHHHHHHHHHcCcceeee
Q 020013 156 PMVVDLIGDRDIPIIA-AGGIVDARGYVAALSLGAQGICL 194 (332)
Q Consensus 156 ~~i~~~~~~~~iPvia-aGGI~~~~~v~~al~~GA~gV~~ 194 (332)
..+.+. +++.++ .=|+.|++++..+...|+|-+.+
T Consensus 103 ~~~~~~----g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~ 138 (218)
T 3jr2_A 103 KVADEL----NGEIQIEIYGNWTMQDAKAWVDLGITQAIY 138 (218)
T ss_dssp HHHHHH----TCEEEEECCSSCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHh----CCccceeeeecCCHHHHHHHHHcCccceee
Confidence 444432 455553 44556888888888899997665
No 497
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=86.84 E-value=6.6 Score=36.54 Aligned_cols=106 Identities=8% Similarity=0.024 Sum_probs=72.1
Q ss_pred HHHHHhcCCcEEEEccCCCcHH---HHHHHHh---CCCEEEEecC---CHHHHHH----HHHcCCCEEEEecCCCCcccC
Q 020013 80 IKAILSEKVAVLQVSWGEYSEE---LVLEAHS---AGVKVVPQVG---SFDEARK----AVNAGVDAIIVQGREAGGHVI 146 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~~~~~---~i~~~~~---~g~~v~~~v~---s~~~a~~----a~~~g~D~ivv~G~eaGGh~~ 146 (332)
++.+.+.|.+.+-+..|..+.+ .++.+++ .++.+...++ +.+++.+ ..+.++++| +-+
T Consensus 159 a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i--EqP------- 229 (389)
T 3ozy_A 159 LAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWF--EEP------- 229 (389)
T ss_dssp HHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEE--ESC-------
T ss_pred HHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEE--ECC-------
Confidence 3455667999999887754443 4455554 3678887765 6666643 456688877 211
Q ss_pred CCCchhhhHHHHH-HHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeeccc
Q 020013 147 GQDGLISLLPMVV-DLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTR 197 (332)
Q Consensus 147 ~~~~~~~ll~~i~-~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~GT~ 197 (332)
-+...+..+.+++ +.. ++||++.+.+.+..++..++..| +|.|++-..
T Consensus 230 ~~~~d~~~~~~l~~~~~---~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~ 279 (389)
T 3ozy_A 230 LSIDDIEGHRILRAQGT---PVRIATGENLYTRNAFNDYIRNDAIDVLQADAS 279 (389)
T ss_dssp SCTTCHHHHHHHHTTCC---SSEEEECTTCCHHHHHHHHHHTTCCSEECCCTT
T ss_pred CCcccHHHHHHHHhcCC---CCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcc
Confidence 1112355667777 655 79999999999999999999876 688877544
No 498
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=86.82 E-value=4.6 Score=37.62 Aligned_cols=104 Identities=11% Similarity=-0.004 Sum_probs=71.3
Q ss_pred HHHHHhcCCcEEEEccCCC-cH---HHHHHHHhC---CCEEEEecC---CHHHHHH----HHHcCCCEEEEecCCCCccc
Q 020013 80 IKAILSEKVAVLQVSWGEY-SE---ELVLEAHSA---GVKVVPQVG---SFDEARK----AVNAGVDAIIVQGREAGGHV 145 (332)
Q Consensus 80 ~~~~~~~~~~~I~~~~g~~-~~---~~i~~~~~~---g~~v~~~v~---s~~~a~~----a~~~g~D~ivv~G~eaGGh~ 145 (332)
+..+.+.|.+.|.++.|.. +. +.++.+++. ++++...++ +.+++.. +.+.++++| +-+
T Consensus 170 a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--E~P------ 241 (393)
T 2og9_A 170 ASASIERGIGGIKLKVGQPDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWI--EEP------ 241 (393)
T ss_dssp HHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCE--ECC------
T ss_pred HHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEE--ECC------
Confidence 3445567999999887642 22 455666653 577777765 6666644 345678765 221
Q ss_pred CCCCchhhhHHHHHHHhCCCCCcEEeecCcCCHHHHHHHHHcC-cceeeec
Q 020013 146 IGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLG 195 (332)
Q Consensus 146 ~~~~~~~~ll~~i~~~~~~~~iPviaaGGI~~~~~v~~al~~G-A~gV~~G 195 (332)
-+...+..+.++++.+ ++||++.+.+.+.+++.+++..| +|.|++-
T Consensus 242 -~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 288 (393)
T 2og9_A 242 -LDAYDHEGHAALALQF---DTPIATGEMLTSAAEHGDLIRHRAADYLMPD 288 (393)
T ss_dssp -SCTTCHHHHHHHHHHC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred -CCcccHHHHHHHHHhC---CCCEEeCCCcCCHHHHHHHHHCCCCCEEeeC
Confidence 1112466677777776 79999999999999999999987 6888874
No 499
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=86.73 E-value=2.8 Score=37.98 Aligned_cols=104 Identities=13% Similarity=0.187 Sum_probs=62.6
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh--CCCEEEEecC--C----HHHHHHHHHcCCCEEEEecCC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS--AGVKVVPQVG--S----FDEARKAVNAGVDAIIVQGRE 140 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~--~g~~v~~~v~--s----~~~a~~a~~~g~D~ivv~G~e 140 (332)
..++.+++.|++.+.+. -|.. .+ ++++...+ ..++|+..++ + ++.++.+.+.|+|++.+..+.
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 112 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPP 112 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCT
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 45666777888887664 1221 11 33343333 2578887775 3 445667889999999996553
Q ss_pred CCcccCCCCchhhhHHHHHHHhCCCCCcEEe------ecCcCCHHHHHHHH
Q 020013 141 AGGHVIGQDGLISLLPMVVDLIGDRDIPIIA------AGGIVDARGYVAAL 185 (332)
Q Consensus 141 aGGh~~~~~~~~~ll~~i~~~~~~~~iPvia------aGGI~~~~~v~~al 185 (332)
. .. .+.........+.++.+. ++||+. .|---+++.+.+..
T Consensus 113 ~--~~-s~~~l~~~f~~va~a~~~-~lPiilYn~P~~tg~~l~~~~~~~La 159 (313)
T 3dz1_A 113 S--LR-TDEQITTYFRQATEAIGD-DVPWVLQDYPLTLSVVMTPKVIRQIV 159 (313)
T ss_dssp T--CC-SHHHHHHHHHHHHHHHCT-TSCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred C--CC-CHHHHHHHHHHHHHhCCC-CCcEEEEeCccccCcCCCHHHHHHHH
Confidence 1 11 234557777888888721 289886 33223666666655
No 500
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=86.59 E-value=3.1 Score=37.54 Aligned_cols=120 Identities=19% Similarity=0.240 Sum_probs=69.9
Q ss_pred HHHHHHHhcCCcEEEEc--cCCC----cH---HHHHHHHh---CCCEEEEecCC------HHHHHHHHHcCCCEEEEecC
Q 020013 78 ENIKAILSEKVAVLQVS--WGEY----SE---ELVLEAHS---AGVKVVPQVGS------FDEARKAVNAGVDAIIVQGR 139 (332)
Q Consensus 78 ~~~~~~~~~~~~~I~~~--~g~~----~~---~~i~~~~~---~g~~v~~~v~s------~~~a~~a~~~g~D~ivv~G~ 139 (332)
..++.+++.|++.+.+. .|.. .+ ++++...+ ..++|+..+++ ++.++.+.+.|+|++.+..+
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45666778899988764 1221 11 23333332 24788877763 44566788899999998665
Q ss_pred CCCcccCCCCchhhhHHHHHHHhCCCCCcEEee-----cCc-CCHHHHHHHH-HcCcceeeeccccccCccCCCCHHH
Q 020013 140 EAGGHVIGQDGLISLLPMVVDLIGDRDIPIIAA-----GGI-VDARGYVAAL-SLGAQGICLGTRFVASEESYAHPEY 210 (332)
Q Consensus 140 eaGGh~~~~~~~~~ll~~i~~~~~~~~iPviaa-----GGI-~~~~~v~~al-~~GA~gV~~GT~fl~t~Es~~~~~~ 210 (332)
..-. ..+........++.++. ++||+.= .|+ -+++.+.+.. +. -.+..-+|+..+-..
T Consensus 117 ~y~~--~s~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La~~~--------pnIvgiKdssgd~~~ 181 (306)
T 1o5k_A 117 YYNK--PTQEGLYQHYKYISERT---DLGIVVYNVPGRTGVNVLPETAARIAADL--------KNVVGIXEANPDIDQ 181 (306)
T ss_dssp CSSC--CCHHHHHHHHHHHHTTC---SSCEEEEECHHHHSCCCCHHHHHHHHHHC--------TTEEEEEECCCCHHH
T ss_pred CCCC--CCHHHHHHHHHHHHHhC---CCCEEEEeCccccCcCCCHHHHHHHHHhC--------CCEEEEeCCCCCHHH
Confidence 3211 12234466666777665 6898762 343 2677777665 33 224455666555433
Done!