BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020014
         (332 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
           OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
          Length = 153

 Score = 57.4 bits (137), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 43/69 (62%)

Query: 53  TVILKVDMHCEGCANKIVRYARSFEGVEAVKAEVAANKITIVGAVDPSKIREKLDKKTKK 112
           TV +KV M CEGC  K+ R     +GV +V  E  A+K+T+VG VDP+K+  ++  +T K
Sbjct: 27  TVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGK 86

Query: 113 KIDLISPQP 121
           K++L    P
Sbjct: 87  KVELWPYVP 95



 Score = 33.5 bits (75), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 34/66 (51%)

Query: 154 TAVLKLGLHCQGCIEKILKIVSKTKGVMDKSIDKQKDTVTVKGTMDAKALAEVLKERLKR 213
           T  +K+ + C+GC  K+ + V   KGV   +++ +   VTV G +D   +   +  R  +
Sbjct: 27  TVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGK 86

Query: 214 PVEIVP 219
            VE+ P
Sbjct: 87  KVELWP 92


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.305    0.130    0.368 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153,548,588
Number of Sequences: 539616
Number of extensions: 8584222
Number of successful extensions: 231390
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2405
Number of HSP's successfully gapped in prelim test: 1427
Number of HSP's that attempted gapping in prelim test: 70562
Number of HSP's gapped (non-prelim): 78589
length of query: 332
length of database: 191,569,459
effective HSP length: 118
effective length of query: 214
effective length of database: 127,894,771
effective search space: 27369480994
effective search space used: 27369480994
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 61 (28.1 bits)