Query 020015
Match_columns 332
No_of_seqs 131 out of 152
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 10:29:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020015.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020015hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xhba2 c.68.1.17 (A:95-422) P 70.0 2.3 0.00017 35.8 4.7 39 184-222 106-144 (328)
2 d2bo4a1 c.68.1.18 (A:2-382) Ma 44.2 2.9 0.00021 38.5 0.8 177 111-307 1-200 (381)
3 d1omza_ c.68.1.15 (A:) Alpha-1 42.0 4.1 0.0003 30.5 1.2 38 182-219 78-115 (265)
4 d2o8ra4 d.136.1.4 (A:506-691) 26.6 7.5 0.00055 32.7 0.5 53 267-319 119-174 (186)
5 d1klla_ d.32.1.2 (A:) Mitomyci 25.4 26 0.0019 24.8 3.3 36 202-239 82-117 (128)
6 d1qg8a_ c.68.1.1 (A:) Spore co 24.8 1.4E+02 0.01 22.8 11.6 30 184-213 87-116 (255)
7 d1xdpa4 d.136.1.4 (A:502-688) 20.8 20 0.0015 30.0 2.0 55 267-321 120-177 (187)
8 d1s4na_ c.68.1.16 (A:) Glycoli 20.4 24 0.0017 31.9 2.6 38 179-220 131-175 (339)
9 d1vl2a1 c.26.2.1 (A:2-169) Arg 16.6 31 0.0022 24.3 2.0 36 108-147 1-36 (168)
10 d2pjsa1 d.32.1.2 (A:3-113) Unc 16.4 68 0.005 21.3 3.8 23 202-224 69-91 (111)
No 1
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.99 E-value=2.3 Score=35.76 Aligned_cols=39 Identities=15% Similarity=0.054 Sum_probs=34.8
Q ss_pred cccceEEEeccccccCCCChhHHHHHHHHhCCcccccCC
Q 020015 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPAL 222 (332)
Q Consensus 184 a~YDYIflwDdDL~vd~f~i~ry~~Ivr~~gLeISQPAL 222 (332)
+.-|||++.|+|..++.-.++++++.+.+..-.+..|.+
T Consensus 106 a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~ 144 (328)
T d1xhba2 106 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPII 144 (328)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred hhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecce
Confidence 678999999999999999999999999988877777765
No 2
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}
Probab=44.21 E-value=2.9 Score=38.49 Aligned_cols=177 Identities=12% Similarity=0.082 Sum_probs=90.8
Q ss_pred cEEEEeecCccccchhHHH---hhcCCCCcEEEEEEecCCCCccCccccC------CceEEEEEec--------cccc--
Q 020015 111 NLLAIPAGIKQKDNVDAIV---RKFLPENFTVILFHYDGDVNAWRGLDWS------NKAIHIAAQN--------QTKW-- 171 (332)
Q Consensus 111 ~Lla~~VG~kqk~~Vd~~v---~kf~~~nF~vmLFhYDg~vd~W~d~ews------~~aiHv~a~k--------qtKW-- 171 (332)
.||++|+=+.+...+-..+ .+. ...+++++-=|++.|.|...+-. ...+++.... .+|=
T Consensus 1 slVVIP~~NEe~~il~~~v~~~a~~--P~~~eIvVvDdsSdDtt~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GKG~g 78 (381)
T d2bo4a1 1 SLVVFPFKHEHPEVLLHNVRVAAAH--PRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDG 78 (381)
T ss_dssp CEEEEECCSSCHHHHHHHHHHHHHS--TTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHH
T ss_pred CEEEEEcCCCcHHHHHHHHHHHHhC--CCeeEEEEEcCCCCCcHHHHHHHhhhhhccccccchhhhhcccccccCCCcHH
Confidence 3677777666544443333 332 46788888766666666442211 0011121111 1221
Q ss_pred -hhcccccCcccccccceEEEeccccc-cCCCChhHHHHHHHHhCCcccccCCCCCC--CceeeeeeeeecCcceeeeee
Q 020015 172 -WFAKRFLHPDVVSNYDYIFLWDEDLG-VENFDPRRYLEIVKSEGFEISQPALDPNS--TEIHHKFTIRARTKKFHRRVY 247 (332)
Q Consensus 172 -w~akRfLHPdiva~YDYIflwDdDL~-vd~f~i~ry~~Ivr~~gLeISQPALd~~s--~~i~h~iT~R~~~~~vHr~~~ 247 (332)
+.|-+ ..=-.+..|+|.+.|-|+. .+.-.+.+++..++ .|-++.-|.....+ |.+++.+. ++- -+..+
T Consensus 79 ~~~A~~--~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i~-~g~d~V~g~y~R~~~~grvt~~l~--~pl---l~~l~ 150 (381)
T d2bo4a1 79 MNTALR--YFLEETQWERIHFYDADITSFGPDWITKAEEAAD-FGYGLVRHYFPRASTDAMITWMIT--RTG---FALLW 150 (381)
T ss_dssp HHHHHH--HHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHH-TTCSEEEEECCCCTTSCHHHHHTH--HHH---HHHHC
T ss_pred HHHHHH--HHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHh-hhcCeEEEeeccccCCCceehHhh--HHH---HHHHh
Confidence 11110 0001268999999999995 56777899998875 67777777443322 33333111 110 01111
Q ss_pred cccCCccCCCCCCCCCccceEEEeccccchhHHHHhhhhcccCCccccchhhhhhhhhcc
Q 020015 248 DLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQV 307 (332)
Q Consensus 248 ~~~g~~~C~~~~~~ppcTgFVEiMAPVFSR~AwrcvwhmiqNDLvhGWGLDf~w~~c~q~ 307 (332)
. ..|...- .-|-.||. +|+|++.+++.....=+.-.|||+|..+..-+..
T Consensus 151 ~----~~~~~~i-~dPl~G~~-----a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~ 200 (381)
T d2bo4a1 151 P----HTELSWI-EQPLGGEL-----LMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQ 200 (381)
T ss_dssp T----TSSGGGC-SCTTCCCE-----EEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHH
T ss_pred h----hhccccc-ccCCcccc-----eeeHHHHHHhhhhccccccCCcccchHHHHHHHH
Confidence 1 0111111 11334555 7899999988632110112699999998776654
No 3
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.02 E-value=4.1 Score=30.49 Aligned_cols=38 Identities=13% Similarity=-0.001 Sum_probs=29.8
Q ss_pred cccccceEEEeccccccCCCChhHHHHHHHHhCCcccc
Q 020015 182 VVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQ 219 (332)
Q Consensus 182 iva~YDYIflwDdDL~vd~f~i~ry~~Ivr~~gLeISQ 219 (332)
-.+.-|||++.|+|..++.-.+++.++.+.++.-.+.+
T Consensus 78 ~~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~ 115 (265)
T d1omza_ 78 PEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIG 115 (265)
T ss_dssp TTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEE
T ss_pred HhCCcCEEEEeCcccCCCHHHHHHHHHHHHhCCCccee
Confidence 34578999999999999888888888888776654443
No 4
>d2o8ra4 d.136.1.4 (A:506-691) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]}
Probab=26.62 E-value=7.5 Score=32.69 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=33.9
Q ss_pred eEEEeccccchhHH---HHhhhhcccCCccccchhhhhhhhhccCcccceeeeeeE
Q 020015 267 FVEGMAPVFSRSAW---YCAWHLIQNDLVHGWGMDMKLGYCAQVRLLRCVLDKVYQ 319 (332)
Q Consensus 267 FVEiMAPVFSR~Aw---rcvwhmiqNDLvhGWGLDf~w~~c~q~~~~k~VVDa~~V 319 (332)
=||+++||...+-= .-+.....+|++.+|=||-.-.|.-......+-++||--
T Consensus 119 RVEv~~PI~d~~~k~~l~~iL~~~l~Dn~kaw~L~~dG~y~~~~~~~~~~~~sQ~~ 174 (186)
T d2o8ra4 119 RIETACPVLDPTLRREIIDILEIQLRDNIKACRIDSSLNNIYKHNSDEKPVRAQAA 174 (186)
T ss_dssp SBCEEEECCSHHHHHHHHHHHHHHHHCCSSCEEECTTCCEEECCCTTSCCCCHHHH
T ss_pred ceeEEEEeCCHHHHHHHHHHHHHHccccHhhEEECCCCCEeEecCCCCCcccHHHH
Confidence 39999999995543 334444558999999998766554332222233677643
No 5
>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}
Probab=25.43 E-value=26 Score=24.79 Aligned_cols=36 Identities=6% Similarity=0.027 Sum_probs=24.7
Q ss_pred ChhHHHHHHHHhCCcccccCCCCCCCceeeeeeeeecC
Q 020015 202 DPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRART 239 (332)
Q Consensus 202 ~i~ry~~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~ 239 (332)
++++.++-+++.|.+|.+|.-+...|. +.+.+|++.
T Consensus 82 ~l~~~~~~l~~~G~~~~~~p~~~~~G~--~~~~~~DPd 117 (128)
T d1klla_ 82 SVDKKYAELVDAGYEGHLKPWNAVWGQ--RYAIVKDPD 117 (128)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECTTSE--EEEEEECTT
T ss_pred hhHHHHHHHHhccCccccCCeEcCCCc--EEEEEECCC
Confidence 467889999999999988876543332 334555554
No 6
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}
Probab=24.83 E-value=1.4e+02 Score=22.84 Aligned_cols=30 Identities=10% Similarity=-0.003 Sum_probs=23.6
Q ss_pred cccceEEEeccccccCCCChhHHHHHHHHh
Q 020015 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSE 213 (332)
Q Consensus 184 a~YDYIflwDdDL~vd~f~i~ry~~Ivr~~ 213 (332)
+..|||+++|+|-..+.--+++.++.++++
T Consensus 87 a~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~ 116 (255)
T d1qg8a_ 87 AEGEYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred cccccccccccccccccchHHHHHHHHHhC
Confidence 579999999988777666677777777665
No 7
>d1xdpa4 d.136.1.4 (A:502-688) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]}
Probab=20.77 E-value=20 Score=29.95 Aligned_cols=55 Identities=15% Similarity=0.050 Sum_probs=33.7
Q ss_pred eEEEeccccchhHHH---HhhhhcccCCccccchhhhhhhhhccCcccceeeeeeEee
Q 020015 267 FVEGMAPVFSRSAWY---CAWHLIQNDLVHGWGMDMKLGYCAQVRLLRCVLDKVYQLL 321 (332)
Q Consensus 267 FVEiMAPVFSR~Awr---cvwhmiqNDLvhGWGLDf~w~~c~q~~~~k~VVDa~~VvH 321 (332)
=||+|+||...+.=+ -+.....+|++.+|=||-.-.|.-.......-++||--+|
T Consensus 120 RVEv~~PI~d~~~k~~i~~il~~~L~Dn~ka~~L~~dG~y~~~~~~~~~~~~sQ~~~~ 177 (187)
T d1xdpa4 120 RIEVATPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIY 177 (187)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHTCCSSEEECCTTCCCCBCCCCSSCCCCHHHHHH
T ss_pred hhheeeEeCCHHHHHHHHHHHHHHhhhhHHHheeCCCCCEeEcCCCCCCcchHHHHHH
Confidence 499999999965533 3333446899999999865444322222223466654433
No 8
>d1s4na_ c.68.1.16 (A:) Glycolipid 2-alpha-mannosyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.43 E-value=24 Score=31.86 Aligned_cols=38 Identities=21% Similarity=0.529 Sum_probs=26.8
Q ss_pred CcccccccceEEEeccccccCC---CChhHHHHHHHHh----CCccccc
Q 020015 179 HPDVVSNYDYIFLWDEDLGVEN---FDPRRYLEIVKSE----GFEISQP 220 (332)
Q Consensus 179 HPdiva~YDYIflwDdDL~vd~---f~i~ry~~Ivr~~----gLeISQP 220 (332)
|| ++++|||+|=.|+|+.+.. +|+ |+.|++. |.-|+..
T Consensus 131 ~p-~L~~YdYywRvdpD~~f~cdI~yD~---F~~M~~n~k~YGf~~~~~ 175 (339)
T d1s4na_ 131 HE-LLEEYDWYWRVEPDIKLYCDINYDV---FKWMQENEKVYGFTVSIH 175 (339)
T ss_dssp SG-GGTTCSEEEECCTTCEECSCCCSCH---HHHHHHTTCCEEESCEEE
T ss_pred ch-hhhccceEEEeCCCcEEecCCCCCH---HHHHhhcCCeEEEEEeec
Confidence 55 7899999999999998853 455 4555554 4445553
No 9
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=16.58 E-value=31 Score=24.35 Aligned_cols=36 Identities=17% Similarity=0.274 Sum_probs=26.8
Q ss_pred CCccEEEEeecCccccchhHHHhhcCCCCcEEEEEEecCC
Q 020015 108 SNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGD 147 (332)
Q Consensus 108 ~~k~Lla~~VG~kqk~~Vd~~v~kf~~~nF~vmLFhYDg~ 147 (332)
+.|.+||++-|..+..-..-+ ++ .+++|+.+|.+..
T Consensus 1 K~KIvvalSGGvDS~vl~~lL-~~---~~~~v~a~~~~~~ 36 (168)
T d1vl2a1 1 KEKVVLAYSGGLDTSVILKWL-CE---KGFDVIAYVANVG 36 (168)
T ss_dssp CCEEEEECCSSHHHHHHHHHH-HH---TTCEEEEEEEESS
T ss_pred CCEEEEEeccHHHHHHHHHHH-HH---cCCeEEEEEcccC
Confidence 357899999999887666544 44 3689999887664
No 10
>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=16.43 E-value=68 Score=21.30 Aligned_cols=23 Identities=9% Similarity=0.072 Sum_probs=18.0
Q ss_pred ChhHHHHHHHHhCCcccccCCCC
Q 020015 202 DPRRYLEIVKSEGFEISQPALDP 224 (332)
Q Consensus 202 ~i~ry~~Ivr~~gLeISQPALd~ 224 (332)
|++...+-+++.|+++..|--+.
T Consensus 69 dvd~~~~~l~~~g~~~~~~p~~~ 91 (111)
T d2pjsa1 69 NFDEVHARILKAGLPIEYGPVTE 91 (111)
T ss_dssp CHHHHHHHHHHTTCCCSEEEEEC
T ss_pred CHHHHHHHHHhhccccccCCeEc
Confidence 57789999999999987654443
Done!