Query 020017
Match_columns 332
No_of_seqs 175 out of 256
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 10:31:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020017.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020017hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1piwa1 b.35.1.2 (A:1-152,A:32 29.6 9.5 0.00069 31.0 1.7 40 256-295 8-54 (192)
2 d1ng7a_ a.178.1.1 (A:) Soluble 25.3 6.3 0.00046 27.4 -0.2 16 33-48 13-28 (60)
3 d2vqca1 a.4.5.78 (A:4-73) F-11 20.3 21 0.0015 24.7 1.7 33 157-191 22-55 (70)
4 d1vj0a1 b.35.1.2 (A:2-155,A:33 15.5 9.8 0.00071 30.8 -1.2 20 280-299 35-54 (184)
5 d1rjwa1 b.35.1.2 (A:1-137,A:30 14.9 7.4 0.00054 30.4 -2.2 15 280-294 31-45 (171)
6 d1e3ja1 b.35.1.2 (A:4-142,A:31 14.2 47 0.0034 25.7 2.7 37 256-294 5-45 (178)
7 d1e3ia1 b.35.1.2 (A:1-167,A:34 11.2 24 0.0017 28.2 -0.1 19 280-298 39-57 (202)
8 d1llua1 b.35.1.2 (A:2-143,A:31 10.7 11 0.00081 29.5 -2.3 18 280-297 36-53 (175)
9 d2fzwa1 b.35.1.2 (A:1-162,A:33 10.5 68 0.0049 25.5 2.6 16 280-295 37-52 (197)
10 d2jdqd1 d.361.1.1 (D:688-756) 10.0 1.1E+02 0.0081 21.0 3.2 27 302-329 25-51 (69)
No 1
>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.63 E-value=9.5 Score=31.05 Aligned_cols=40 Identities=15% Similarity=0.108 Sum_probs=23.1
Q ss_pred eeeeccccCce---eEEEEeeec-CCCc---ceeeEeeeeccCCCCC
Q 020017 256 AVFYCHATQTT---RAYMVPLEG-ADGT---KAKAAAVCHTDTSAWN 295 (332)
Q Consensus 256 aVfyCH~~~~T---~vY~V~L~g-~dG~---~~~AvAVCH~DTS~Wn 295 (332)
.-|.||..... +.-+++..- .++. +++|++|||+|...|.
T Consensus 8 ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~ 54 (192)
T d1piwa1 8 EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAA 54 (192)
T ss_dssp EEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHT
T ss_pred EEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHc
Confidence 34677776542 222333321 2333 6899999999965554
No 2
>d1ng7a_ a.178.1.1 (A:) Soluble domain of poliovirus core protein 3a {Poliovirus type 1, strain Mahoney [TaxId: 12080]}
Probab=25.33 E-value=6.3 Score=27.40 Aligned_cols=16 Identities=44% Similarity=0.812 Sum_probs=13.9
Q ss_pred CCCCCccHHHHhhcCC
Q 020017 33 LPNSPMPKAVKDLLQP 48 (332)
Q Consensus 33 lP~TPmPkai~~Ll~p 48 (332)
..+||-|.||.|||+.
T Consensus 13 v~~tPpP~aI~DLLkS 28 (60)
T d1ng7a_ 13 IKTSPPPECINDLLQA 28 (60)
T ss_dssp CSCCCSSTTTHHHHHH
T ss_pred eCCCCCChHHHHHHHh
Confidence 3589999999999965
No 3
>d2vqca1 a.4.5.78 (A:4-73) F-112 {Sulfolobus virus-like particle SSV1 [TaxId: 244589]}
Probab=20.25 E-value=21 Score=24.70 Aligned_cols=33 Identities=27% Similarity=0.360 Sum_probs=25.2
Q ss_pred ChhHHhhhcCCCCCCHHHHHHHHHHH-HccCCCCCC
Q 020017 157 KLPEIFNQFSVKPGSVEAEIMQNTIK-ECEDPGIKG 191 (332)
Q Consensus 157 kl~~iL~~Fsi~~~S~~A~~m~~Tl~-~Ce~p~~~G 191 (332)
.|.+||+.|.|+. +.|..++.||+ .||.-|.+-
T Consensus 22 ~ledilaqfeis~--~~ayniqr~l~~ice~hpdec 55 (70)
T d2vqca1 22 TLEDILAQFEISV--PSAYNIQRALKAICERHPDEC 55 (70)
T ss_dssp CHHHHHHHHCCCH--HHHHHHHHHHHHHHHHCTTTE
T ss_pred cHHHHHHHheecc--chHhHHHHHHHHHHhcCCchh
Confidence 4789999999863 56889999995 588766443
No 4
>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}
Probab=15.54 E-value=9.8 Score=30.84 Aligned_cols=20 Identities=20% Similarity=0.380 Sum_probs=16.0
Q ss_pred ceeeEeeeeccCCCCCCCch
Q 020017 280 KAKAAAVCHTDTSAWNPKHL 299 (332)
Q Consensus 280 ~~~AvAVCH~DTS~Wnp~H~ 299 (332)
+++|.+|||+|...|.-..+
T Consensus 35 kv~a~gIC~sD~~~~~G~~~ 54 (184)
T d1vj0a1 35 EILSAGVCGSDVHMFRGEDP 54 (184)
T ss_dssp EEEEEEECHHHHHHHTTCCT
T ss_pred EEEEECCCCCchhheeccCC
Confidence 68999999999987765443
No 5
>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=14.87 E-value=7.4 Score=30.36 Aligned_cols=15 Identities=53% Similarity=0.753 Sum_probs=12.0
Q ss_pred ceeeEeeeeccCCCC
Q 020017 280 KAKAAAVCHTDTSAW 294 (332)
Q Consensus 280 ~~~AvAVCH~DTS~W 294 (332)
|++|.+|||+|...|
T Consensus 31 kv~a~gic~sD~~~~ 45 (171)
T d1rjwa1 31 RIKACGVCHTDLHAA 45 (171)
T ss_dssp EEEEEEECHHHHHHH
T ss_pred EEEEeeccccceeee
Confidence 689999999996433
No 6
>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}
Probab=14.18 E-value=47 Score=25.67 Aligned_cols=37 Identities=19% Similarity=0.373 Sum_probs=21.6
Q ss_pred eeeeccccCceeEEEEeeec-CCCc---ceeeEeeeeccCCCC
Q 020017 256 AVFYCHATQTTRAYMVPLEG-ADGT---KAKAAAVCHTDTSAW 294 (332)
Q Consensus 256 aVfyCH~~~~T~vY~V~L~g-~dG~---~~~AvAVCH~DTS~W 294 (332)
||+|- ...-++-++++-. .+|. |++|.+|||+|...|
T Consensus 5 AVl~g--~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~ 45 (178)
T d1e3ja1 5 AVLYK--QNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYY 45 (178)
T ss_dssp EEEEE--TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHH
T ss_pred EEEEc--CCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhh
Confidence 56653 2334455555432 2333 689999999997433
No 7
>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}
Probab=11.16 E-value=24 Score=28.21 Aligned_cols=19 Identities=42% Similarity=0.646 Sum_probs=15.5
Q ss_pred ceeeEeeeeccCCCCCCCc
Q 020017 280 KAKAAAVCHTDTSAWNPKH 298 (332)
Q Consensus 280 ~~~AvAVCH~DTS~Wnp~H 298 (332)
|++|.+|||+|...|+...
T Consensus 39 kv~a~gic~sD~~~~~G~~ 57 (202)
T d1e3ia1 39 QVIATCVCPTDINATDPKK 57 (202)
T ss_dssp EEEEEECCHHHHHTTCTTS
T ss_pred EEEEEEEeccccceeeeec
Confidence 6899999999997776543
No 8
>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=10.74 E-value=11 Score=29.49 Aligned_cols=18 Identities=44% Similarity=0.608 Sum_probs=14.2
Q ss_pred ceeeEeeeeccCCCCCCC
Q 020017 280 KAKAAAVCHTDTSAWNPK 297 (332)
Q Consensus 280 ~~~AvAVCH~DTS~Wnp~ 297 (332)
|++|.+|||.|...|+-.
T Consensus 36 kv~a~gic~~D~~~~~G~ 53 (175)
T d1llua1 36 KIEASGVCHTDLHAAEGD 53 (175)
T ss_dssp EEEEEECCHHHHHHHHTC
T ss_pred EEEEecCcccchhhhccC
Confidence 689999999998665543
No 9
>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}
Probab=10.45 E-value=68 Score=25.46 Aligned_cols=16 Identities=50% Similarity=0.694 Sum_probs=12.9
Q ss_pred ceeeEeeeeccCCCCC
Q 020017 280 KAKAAAVCHTDTSAWN 295 (332)
Q Consensus 280 ~~~AvAVCH~DTS~Wn 295 (332)
|++|.+|||+|-..|+
T Consensus 37 kv~a~gic~sD~~~~~ 52 (197)
T d2fzwa1 37 KIIATAVCHTDAYTLS 52 (197)
T ss_dssp EEEEEECCHHHHHHHH
T ss_pred EEEEecCCCCcHHHHc
Confidence 6889999999975544
No 10
>d2jdqd1 d.361.1.1 (D:688-756) Polymerase basic protein 2, BP2 {Influenza A virus [TaxId: 11320]}
Probab=10.03 E-value=1.1e+02 Score=20.96 Aligned_cols=27 Identities=15% Similarity=0.288 Sum_probs=22.0
Q ss_pred hhhccCCCCcceeeeecCCcEEEeeCCC
Q 020017 302 QVLKVKPGTVPICHFLPEDHIVWVPNKK 329 (332)
Q Consensus 302 ~~L~vkPG~~pVCHfl~~~~ivWvp~~~ 329 (332)
++-+.+||+ -.--|+.++++|||-+-+
T Consensus 25 eLs~L~kGE-kANvligqg~~v~v~krk 51 (69)
T d2jdqd1 25 ELSNLAKGE-KANVLIGQGDVVLVMKRK 51 (69)
T ss_dssp GGGGSCTTC-EEEEEEETTEEEEEEESC
T ss_pred HHhhcCccc-cccEEEeCCCEEEEEEec
Confidence 456789996 678899999999997644
Done!