BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020018
(332 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 35/190 (18%)
Query: 113 ITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTY-----------YS 161
IT +R L PG+W++ ++I +Y +EA + +C F T+ Y+
Sbjct: 302 ITGKILRCLKPGKWLNDEVINLYMVLLKEREAREPKKFLKCHFFNTFFFTKLVNSATGYN 361
Query: 162 QAALADWSSLNFAQAAGFRDRYMSRLDTCEKIYVPINSDGHWYMLVVDISHATATIWDSL 221
A+ W+S+ R L C+KI++PI+ + HW + V++I DS
Sbjct: 362 YGAVRRWTSMK---------RLGYHLKDCDKIFIPIHMNIHWTLAVINIKDQKFQYLDSF 412
Query: 222 ESPSRREKMINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQA---GLPQQPNGFD 278
+ RE I ++LA + + E L+ RQ LP Q NGFD
Sbjct: 413 KG---REPKILDALARYFVDEVRDKSEVD---------LDVSRWRQEFVQDLPMQRNGFD 460
Query: 279 CGYYVMKYMD 288
CG +++KY+D
Sbjct: 461 CGMFMVKYID 470
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 92 VEITPFFHGK-REIVVDIGDNS---ITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKD 147
E+ F G+ R V+ +NS IT ++ L P W++ ++I +Y + +E +
Sbjct: 265 AEVYRAFSGRNRRKVLATHENSNIDITGEVLQCLTPSAWLNDEVINVYLELLKERETREP 324
Query: 148 VTSPRCWFLPTYYSQAALADWSSLNFAQAAGF--RDRYMSRLDTCEKIYVPINSDGHWYM 205
+C + T++ + ++D S NF + + + L C+ I+VPI+ HW +
Sbjct: 325 KKYLKCHYFNTFFYKKLVSD-SGYNFKAVRRWTTQRKLGYALIDCDMIFVPIHRGVHWTL 383
Query: 206 LVVDISHATATIWDSLESPSRREKMINESLAILASLDFVLRQEARALFCNQFTFLNFQIC 265
V++ + DSL IL +L + EA + ++ +
Sbjct: 384 AVINNRESKLLYLDSLNGVD---------PMILNALAKYMGDEANEKSGKKIDANSWDME 434
Query: 266 RQAGLPQQPNGFDCGYYVMKYMD 288
LPQQ NG+DCG +++KY+D
Sbjct: 435 FVEDLPQQKNGYDCGMFMLKYID 457
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 31/176 (17%)
Query: 113 ITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLN 172
IT +TL P W++ II + MK EK ++P +++ +++L+
Sbjct: 435 ITVRDFKTLAPRRWLNDTIIEFF-----MKYIEK--STPNTVAFNSFF-------YTNLS 480
Query: 173 FAQAAGFRDRYMSR----LDTCEKIYVPIN-SDGHWYMLVVDISHATATIWDSLESPSRR 227
G R R+M R +D +KI+ PIN + HW + ++D+ T DSL +
Sbjct: 481 ERGYQGVR-RWMKRKKTQIDKLDKIFTPINLNQSHWALGIIDLKKKTIGYVDSLSNGPNA 539
Query: 228 EKMINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYV 283
S AIL L + +E++ F ++ C PQQPNG+DCG YV
Sbjct: 540 M-----SFAILTDLQKYVMEESKHTIGEDFDLIHLD-C-----PQQPNGYDCGIYV 584
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 11/178 (6%)
Query: 113 ITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLN 172
I+ +++ L P +W++ D+ +Y + ++ +C F T++ L S N
Sbjct: 141 ISGETLQCLRPNQWLNDDVTNLYLELLKERQTRDPQKYFKCHFFNTFF-YVKLVSGSGYN 199
Query: 173 FAQAAGFRDRYMSRLD--TCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKM 230
+ + + + D C+ I+VPI+ D HW + V++ DSL
Sbjct: 200 YKAVSRWTTKRKLGYDLIDCDIIFVPIHIDIHWTLGVINNRERKFVYLDSL--------F 251
Query: 231 INESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYVMKYMD 288
IL ++ L E + ++ + PQQ NG+DCG +++KY+D
Sbjct: 252 TGVGHTILNAMAKYLVDEVKQKSQKNIDVSSWGMEYVEERPQQQNGYDCGMFMLKYID 309
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 112 SITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSL 171
+ITR ++TL W++ +II Y + + EK + S F ++++ A + ++
Sbjct: 451 TITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSVHA-FNTFFFTKLKTAGYQAV 509
Query: 172 NFAQAAGFRDRYMSRLD--TCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSRREK 229
R+ ++D + + + VPI+ HW + VVD T +DS+
Sbjct: 510 K---------RWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGG------ 554
Query: 230 MINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAG--LPQQPNGFDCGYYVMKYM 287
+ NE+ IL L+QE+ +F +Q+ + +PQQ NG DCG + KY
Sbjct: 555 INNEACRILLQY---LKQESIDKKRKEFDTNGWQLFSKKSQEIPQQMNGSDCGMFACKYA 611
Query: 288 DSPCIV 293
D CI
Sbjct: 612 D--CIT 615
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 112 SITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSL 171
+ITR ++TL W++ +II Y + + EK + S F ++++ A + ++
Sbjct: 452 TITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSVHA-FNTFFFTKLKTAGYQAV 510
Query: 172 NFAQAAGFRDRYMSRLD--TCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSRREK 229
R+ ++D + + + VPI+ HW + VVD T +DS+
Sbjct: 511 K---------RWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGG------ 555
Query: 230 MINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAG--LPQQPNGFDCGYYVMKYM 287
+ NE+ IL L+QE+ +F +Q+ + +PQQ NG DCG + KY
Sbjct: 556 INNEACRILLQY---LKQESIDKKRKEFDTNGWQLFSKKSQEIPQQMNGSDCGMFACKYA 612
Query: 288 DSPCIV 293
D CI
Sbjct: 613 D--CIT 616
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 103 EIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQ 162
E++ + +ITR ++TL W++ +II Y + + EK S F ++++
Sbjct: 438 EVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGFPSVHA-FNTFFFTK 496
Query: 163 AALADWSSLNFAQAAGFRDRYMSRLD--TCEKIYVPINSDGHWYMLVVDISHATATIWDS 220
A + ++ R+ ++D + + + VPI+ HW + VVD + T +DS
Sbjct: 497 LKTAGYQAVK---------RWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRRKSITYYDS 547
Query: 221 LESPSRREKMINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAG--LPQQPNGFD 278
+ + NE+ IL L+QE+ +F +Q+ + +PQQ NG D
Sbjct: 548 MGG------INNEACRILLQY---LKQESVDKKRKEFDTNGWQLFSKKSQEIPQQMNGSD 598
Query: 279 CGYYVMKYMDSPCIV 293
CG + KY D CI
Sbjct: 599 CGMFACKYAD--CIT 611
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 32/199 (16%)
Query: 99 HGKR-EIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADY---KNMKEAEKDVTSPRCW 154
HG + EI+ ITR ++TL W++ ++I Y + +N K+ + +
Sbjct: 382 HGPQDEILSSAFKLRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPALHVFSTF 441
Query: 155 FLPTYYSQA--ALADWS-SLNFAQAAGFRDRYMSRLDTCEKIYVPINSDGHWYMLVVDIS 211
F P S A+ W+ +N + E I VPI+ HW ++V+D+
Sbjct: 442 FYPKLKSGGYQAVKRWTKGVNLFEQ--------------EIILVPIHRKVHWSLVVIDLR 487
Query: 212 HATATIWDSLESPSRREKMINESLAILASLDFVLRQEARALFCNQFTFLNF--QICRQAG 269
DS+ R I L L+ E++ + L + +
Sbjct: 488 KKCLKYLDSMGQKGHR---------ICEILLQYLQDESKTKRNSDLNLLEWTHHSMKPHE 538
Query: 270 LPQQPNGFDCGYYVMKYMD 288
+PQQ NG DCG + KY D
Sbjct: 539 IPQQLNGSDCGMFTCKYAD 557
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 34/200 (17%)
Query: 99 HGKR-EIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADY---KNMKEAEKDVTSPRCW 154
HG + EI+ ITR ++TL W++ ++I Y + +N K+ + +
Sbjct: 382 HGPQDEILSSAFKLRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPALHVFSTF 441
Query: 155 FLPTYYSQA--ALADWS-SLNFAQAAGFRDRYMSRLDTCEKIYVPINSDGHWYMLVVDIS 211
F P S A+ W+ +N + E I VPI+ HW ++V+D+
Sbjct: 442 FYPKLKSGGYQAVKRWTKGVNLFEQ--------------EIILVPIHRKVHWSLVVIDLR 487
Query: 212 HATATIWDSLESPSRREKMINESLAILASLDFVLRQEA---RALFCNQFTFLNFQICRQA 268
DS+ R I L L+ E+ R + N + ++ + +
Sbjct: 488 KKCLKYLDSMGQKGHR---------ICEILLQYLQDESKTKRNIDLNLLEWTHYSM-KPH 537
Query: 269 GLPQQPNGFDCGYYVMKYMD 288
+PQQ NG DCG + KY D
Sbjct: 538 EIPQQLNGSDCGMFTCKYAD 557
>sp|Q54XR2|SENP8_DICDI Probable sentrin-specific protease 8 OS=Dictyostelium discoideum
GN=senp8 PE=3 SV=1
Length = 243
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 104 IVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADY-KNMKEAEKDVTSPRCWFLPTYYSQ 162
++V D++I +S + L +W++ II+ Y ++ K+ E K+ + L S
Sbjct: 5 LIVSYNDSAIYQSDINILKSNQWLNDSIISFYLEWLKDGGEDNKNKIPNQVLLL----SP 60
Query: 163 AALADWSSLNFAQAAGFRDRYMSRLDTCEKIYVPINSD---------GHWYMLVVDISHA 213
+ + S + Q L T E I+ P+ ++ HW +L+ S
Sbjct: 61 SVVFCCSFVESEQEIQLMFEQPLSLKTKEVIFFPLTNNRDPNVIGGGTHWSLLIFIKSLN 120
Query: 214 TATIWDSLESPSRREKMINESLAILASLDFVL-----RQEARALFCNQFTFLNFQICRQA 268
+DS+ S + ++++ I++ F+L + + NQ T
Sbjct: 121 KFIYYDSINSFNS-----SDAIFIISKFKFLLSSPPPKTNLKEFLINQKT---------- 165
Query: 269 GLPQQPNGFDCGYYVMKYMD 288
PQQ NG+DCG YV+ ++
Sbjct: 166 --PQQQNGYDCGLYVLSIIE 183
>sp|O42957|ULP1_SCHPO Ubiquitin-like-specific protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp1 PE=3 SV=1
Length = 568
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 31/209 (14%)
Query: 113 ITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEK-DVTSPRCWFLPTYYSQAALADWSSL 171
IT + TL +W++ ++I Y + + E K D + PR T++ ++SL
Sbjct: 379 ITLKDLHTLRNRQWLNDEVINFYMNL--ISERSKIDSSLPRVHGFNTFF-------YTSL 429
Query: 172 NFAQAAGFR---DRYMSRLDTCEKIYVPINSDGHWYMLVVDISHATATIWDSLE-SPSRR 227
AG R + + + +++P++ D HW M V++ S WDSL SP +
Sbjct: 430 QRRGYAGVRRWAKKARVNIADMDAVFIPVHLDVHWCMAVINKSKKRFEYWDSLAGSPGKV 489
Query: 228 EKMINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYVMKYM 287
++ D+ + + A+ + + NF P+Q NG DCG + K
Sbjct: 490 FDLLR---------DYYIAETKGAVDVSDWE--NFM---DDNSPRQRNGHDCGVFACKTA 535
Query: 288 D--SPCIVVHDSYQHDSDHARLLLALYLV 314
+ S + V S Q+D R+ +A ++
Sbjct: 536 ECVSRNVPVQFS-QNDMPELRIKMAASII 563
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 113 ITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQA---ALADWS 169
++ ++ L PGE++ +I Y Y D T+ C F T++ + A++
Sbjct: 333 VSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANCHFFNTFFYKKLTEAVSYKG 392
Query: 170 SLNFAQAAGFRDRYMSRLDT-CEK-IYVPINSDGHWYMLVV------DISHATATIWDSL 221
+ A FR R+ D C+ I++PI+ D HW ++++ D S T DSL
Sbjct: 393 NDRDAYFVKFR-RWWKGFDLFCKSYIFIPIHEDLHWSLVIICIPDKEDESGLTIIHLDSL 451
Query: 222 ESPSRREKMINESLAILASLDFVLRQEARALFCNQFTFLNFQIC-------------RQA 268
R I ++ LR+E + NQ L+ I +
Sbjct: 452 GLHPRN--------LIFNNVKRFLREEWN--YLNQDAPLDLPISAKVWRDLPNMINEAEV 501
Query: 269 GLPQQPNGFDCGYYVMKYM 287
+PQQ N FDCG +++ ++
Sbjct: 502 QVPQQKNDFDCGLFLLFFI 520
>sp|Q09353|SENP_CAEEL Sentrin-specific protease OS=Caenorhabditis elegans GN=ulp-1 PE=2
SV=3
Length = 697
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 30/187 (16%)
Query: 103 EIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYA----DYKNMKEAEKDVTSPRCWFLPT 158
E VD I + + TL W++ +II Y D N D P+ + T
Sbjct: 493 EQFVDAFSIQICKKDLATLSGLHWLNDEIINFYLQLICDRSN-----GDSKYPKIYAFNT 547
Query: 159 Y-YSQAALADWSSLNFAQAAGFRDRYMSRLD--TCEKIYVPINSDGHWYMLVVDISHATA 215
+ YS ++S+ R+ ++D + + VP++ HW M V+D+
Sbjct: 548 FFYSNIVSKGYASVK---------RWTRKVDIFAFDIVLVPVHLGMHWCMAVIDMGEKKI 598
Query: 216 TIWDSLESPSRREKMINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPN 275
+DSL + + A+L +L L E+ F + I + +P+Q N
Sbjct: 599 EFYDSL---------YDGNTAVLPALRGYLEAESLDKKKTAMNFSGWTIQQMTDIPRQQN 649
Query: 276 GFDCGYY 282
G DCG +
Sbjct: 650 GSDCGVF 656
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 29/183 (15%)
Query: 113 ITRSSMRTLLPGEWIDGDIITMYADY---KNMKEAEKDVTSPRCWFLPTYYSQA--ALAD 167
ITR ++TL W++ ++I Y + ++ K+ + + +F P S A+
Sbjct: 396 ITRGDIQTLKNYHWLNDEVINFYMNLLVERSKKQGYPALHALSTFFYPKLKSGGYQAVKR 455
Query: 168 WSSLNFAQAAGFRDRYMSRLDTCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSRR 227
W+ + D+ E + VPI+ HW ++V+D+ DS+ R
Sbjct: 456 WT-----KGVNLFDQ--------ELVLVPIHRKVHWSLVVMDLRKKCLKYLDSMGQKGHR 502
Query: 228 EKMINESLAILASLDFVLRQEARALFCNQFTFLNFQ--ICRQAGLPQQPNGFDCGYYVMK 285
I L L+ E++ L + + +PQQ NG DCG + K
Sbjct: 503 ---------ICEILLQYLQDESKTKRNTDLNLLEWTHYSMKPHEIPQQLNGSDCGMFTCK 553
Query: 286 YMD 288
Y D
Sbjct: 554 YAD 556
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 31/184 (16%)
Query: 113 ITRSSMRTLLPGEWIDGDIITMYADY---KNMKEAEKDVTSPRCWFLPTYYSQA--ALAD 167
ITR ++TL W++ ++I Y + ++ K+ + + +F P S A+
Sbjct: 396 ITRGDIQTLKNYHWLNDEVINFYMNLLVERSKKQGYPALHAFSTFFYPKLKSGGYQAVKR 455
Query: 168 WS-SLNFAQAAGFRDRYMSRLDTCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSR 226
W+ +N + E + VPI+ HW ++V+D+ DS+
Sbjct: 456 WTKGVNLFEQ--------------ELVLVPIHRKVHWSLVVMDLRKKCLKYLDSMGQKGH 501
Query: 227 REKMINESLAILASLDFVLRQEARALFCNQFTFLNFQ--ICRQAGLPQQPNGFDCGYYVM 284
R I L L+ E++ L + + +PQQ NG DCG +
Sbjct: 502 R---------ICEILLQYLQDESKTKRNTDLNLLEWTHYSMKPHEIPQQLNGSDCGMFTC 552
Query: 285 KYMD 288
KY D
Sbjct: 553 KYAD 556
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 182 RYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMI-------N 232
++ +D EK I++PIN HW +++ I H + +E+P R ++ +
Sbjct: 378 KWTKNVDLFEKDYIFIPINCSFHWSLVI--ICHPGELVPSHVENPQRVPCILHLDSIKGS 435
Query: 233 ESLAILASLDFVLRQEARALFCNQFTFLNFQICRQA---GLPQQPNGFDCGYYVMKYMD 288
++ LR+E +A N + Q+ LPQQ N FDCG +++ Y+D
Sbjct: 436 HKGGLINIFPSYLREEWKARHENTTNDSSRAPNMQSISLELPQQENSFDCGLFLLHYLD 494
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 41/225 (18%)
Query: 112 SITRSSMRTLLPGEWIDGDIITMYADY-KNMKEAEKDVTSPRCWFLPTYYSQAALADWSS 170
SI + + L P +++ II Y +Y KN + E+ D SS
Sbjct: 395 SICKRDVELLQPETFVNDTIIDFYINYLKNQIQTEEKHRFHFFNSFFFRKLADLDKDPSS 454
Query: 171 LNFAQAAGFRDRYMSR-LDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRR 227
+ +AA R R +R +D K I+VP+N + HW ++V+ A D S++
Sbjct: 455 IADGKAAFLRVRKWTRKVDMFGKDYIFVPVNYNLHWSLIVICHPGEVANRTDLDLDDSKK 514
Query: 228 EKMINESLAILASLDFVLRQEARALFCNQFT-------------FLNFQICRQAGLPQQP 274
I +I S L+ + C ++ F+N + LPQQ
Sbjct: 515 VPCILHMDSIKGS-HAGLKNLVQTYLCEEWKERHKETSDDISSRFMNLRFV-SLELPQQE 572
Query: 275 NGFDCGYYVMKYMDSPCIVVHDSYQHDSDHARLLLALYLVQSPLN 319
N FDCG +++ Y L L+L ++PLN
Sbjct: 573 NSFDCGLFLLHY----------------------LELFLAEAPLN 595
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 35/213 (16%)
Query: 109 GDNSI--TRSSMRTLLPGEWIDGDIITMYADYK--NMKEAEKDVTSPRCWFLPTYYSQAA 164
G NSI T + + L GE+++ I+ Y Y ++ + + F +Y++
Sbjct: 343 GTNSIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTFFYNRLT 402
Query: 165 LADWSSLNFAQAAGFRDRYMSRLDTCEKIY--VPINSDGHWYMLVV-----------DIS 211
D G R ++ ++D K Y VPIN HWY+ ++ +
Sbjct: 403 SKDKDGKRLGHR-GVR-KWTQKVDLFHKKYIIVPINETFHWYLAIICNIDRLMPVDTKLE 460
Query: 212 HATATIWDSLESPS----RREKMINESLAIL----------ASLDFVLRQEARALFCNQF 257
+ S+E PS R+ ++ + S AIL +L+++ F +
Sbjct: 461 EQDEIVMSSVEQPSASKTRQAELTSNSPAILIFDSLANLHKGALNYLREYLLEEAFERKN 520
Query: 258 TFLNFQICR--QAGLPQQPNGFDCGYYVMKYMD 288
L R A +PQQ N DCG Y + +++
Sbjct: 521 VHLKSTDIRGFHAKVPQQSNFSDCGIYALHFVE 553
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 118 MRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAA 177
+ TL W++ +I MY E D + F +++ + + +
Sbjct: 574 LATLDGQNWLNDQVINMYG------ELIMDAVPDKVHFFNSFFHRQLVT--------KGY 619
Query: 178 GFRDRYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMINESL 235
R+ ++D +K + +PI+ + HW ++ V +S+ + +DS + I+
Sbjct: 620 NGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNRIISFYDS--------QGIHFKF 671
Query: 236 AILASLDFVLRQEARALFCNQFTFL-NFQICRQAGLPQQPNGFDCGYYVMKYMDSPCIVV 294
+ ++L EAR N+ FL +Q +PQQ N DCG +V++Y C+ +
Sbjct: 672 CVENIRKYLL-TEAREK--NRPEFLQGWQTAVTKCIPQQKNDSDCGVFVLQYCK--CLAL 726
Query: 295 HDSYQ-HDSDHARLLLALY 312
+Q D R+ +Y
Sbjct: 727 EQPFQFSQEDMPRVRKRIY 745
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 118 MRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAA 177
+ TL W++ +I MY E D + F +++ + + +
Sbjct: 574 LATLDGQNWLNDQVINMYG------ELIMDAVPDKVHFFNSFFHRQLVT--------KGY 619
Query: 178 GFRDRYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMINESL 235
R+ ++D +K + +PI+ + HW ++ V +S+ + +DS + I+
Sbjct: 620 NGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNRIISFYDS--------QGIHFKF 671
Query: 236 AILASLDFVLRQEARALFCNQFTFL-NFQICRQAGLPQQPNGFDCGYYVMKYMDSPCIVV 294
+ ++L EAR N+ FL +Q +PQQ N DCG +V++Y C+ +
Sbjct: 672 CVENIRKYLL-TEAREK--NRPEFLQGWQTAVTKCIPQQKNDSDCGVFVLQYCK--CLAL 726
Query: 295 HDSYQ 299
+Q
Sbjct: 727 EQPFQ 731
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 30/185 (16%)
Query: 118 MRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAA 177
+ TL W++ +I MY E D + F +++ + + +
Sbjct: 568 LATLDGQNWLNDQVINMYG------ELIMDAVPDKVHFFNSFFHRQLVT--------KGY 613
Query: 178 GFRDRYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMINESL 235
R+ ++D +K + +PI+ + HW ++ V +S + +DS + I+
Sbjct: 614 NGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSSRIISFYDS--------QGIHFKF 665
Query: 236 AILASLDFVLRQEARALFCNQFTFL-NFQICRQAGLPQQPNGFDCGYYVMKYMDSPCIVV 294
+ ++L EAR N+ FL +Q +PQQ N DCG +V++Y C+ +
Sbjct: 666 CVENIRKYLL-TEAREK--NRPEFLQGWQTAVTKCIPQQKNDSDCGVFVLQYCK--CLAL 720
Query: 295 HDSYQ 299
+Q
Sbjct: 721 EQPFQ 725
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 39.3 bits (90), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 34/188 (18%)
Query: 121 LLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAAGFR 180
L P E++ ++ Y + + + + S C F TY+ + L+D + F
Sbjct: 353 LAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFNTYFYKK-LSDAVTYKGNDKDAFF 411
Query: 181 ---DRYMSRLDTCEK--IYVPINSDGHWYMLVV------DISHATATIWDSLESPSRREK 229
R+ +D K I++PI+ D HW +++V D S T DSL SR+
Sbjct: 412 VRFRRWWKGIDLFRKAYIFIPIHEDLHWSLVIVCIPDKKDESGLTILHLDSLGLHSRK-- 469
Query: 230 MINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQA-------------GLPQQPNG 276
+I+ ++ L+ E L + ++ L+ I + +PQQ N
Sbjct: 470 ------SIVENVKRFLKDEWNYLNQDDYS-LDLPISEKVWKNLPRRISEAVVQVPQQKND 522
Query: 277 FDCGYYVM 284
FDCG +V+
Sbjct: 523 FDCGPFVL 530
>sp|C4PLJ4|CDUB2_CHLTZ Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar B (strain TZ1A828/OT) GN=cdu2 PE=3 SV=1
Length = 339
Score = 38.5 bits (88), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 199 SDGHWYMLVVDISHATATIWDSLESPSRREKMINESL-AILASLDFVLRQEARALFCNQF 257
+ HW +++VDI H T +DS + + + E L + ASL + +E A +
Sbjct: 200 GNSHWVLVIVDIEHRCVTFFDSFYNYIASPQQMREQLEGLAASLGAIYPKEGGADSDQEE 259
Query: 258 TFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLLLALY 312
FQ+ + + Q P F CG + + Y+++P + + + R LLA +
Sbjct: 260 LLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRALLADF 319
Query: 313 L 313
+
Sbjct: 320 I 320
>sp|Q3KKG9|CDUB2_CHLTA Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar A (strain HAR-13 / ATCC VR-571B) GN=cdu2 PE=3
SV=1
Length = 339
Score = 38.5 bits (88), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 199 SDGHWYMLVVDISHATATIWDSLESPSRREKMINESL-AILASLDFVLRQEARALFCNQF 257
+ HW +++VDI H T +DS + + + E L + ASL + +E A +
Sbjct: 200 GNSHWVLVIVDIEHRCVTFFDSFYNYIASPQQMREQLEGLAASLGAIYPKEGGADSDQEE 259
Query: 258 TFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLLLALY 312
FQ+ + + Q P F CG + + Y+++P + + + R LLA +
Sbjct: 260 LLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRALLADF 319
Query: 313 L 313
+
Sbjct: 320 I 320
>sp|D3UTF3|CDUB2_CHLTS Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar E (strain Sweden2) GN=cdu2 PE=3 SV=1
Length = 339
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
Query: 199 SDGHWYMLVVDISHATATIWDS----LESPSR-REKMINESLAILASLDFVLRQEARALF 253
+ HW +++VDI H T +DS + SP + RE++ E LA ASL + +E A
Sbjct: 200 GNSHWVLVIVDIEHRCVTFFDSFYDYIASPQQMREQL--EGLA--ASLGAIYPKEGGADS 255
Query: 254 CNQFTFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLL 308
+ FQ+ + + Q P F CG + + Y+++P + + + R L
Sbjct: 256 DQEELLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRAL 315
Query: 309 LALYL 313
LA ++
Sbjct: 316 LADFI 320
>sp|O84875|CDUB2_CHLTR Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
(strain D/UW-3/Cx) GN=cdu2 PE=1 SV=1
Length = 339
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
Query: 199 SDGHWYMLVVDISHATATIWDS----LESPSR-REKMINESLAILASLDFVLRQEARALF 253
+ HW +++VDI H T +DS + SP + RE++ E LA ASL + +E A
Sbjct: 200 GNSHWVLVIVDIEHRCVTFFDSFYDYIASPQQMREQL--EGLA--ASLGAIYPKEGGADS 255
Query: 254 CNQFTFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLL 308
+ FQ+ + + Q P F CG + + Y+++P + + + R L
Sbjct: 256 DQEELLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRAL 315
Query: 309 LALYL 313
LA ++
Sbjct: 316 LADFI 320
>sp|C4PQQ9|CDUB2_CHLTJ Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar B (strain Jali20/OT) GN=cdu2 PE=3 SV=1
Length = 339
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 199 SDGHWYMLVVDISHATATIWDSLESPSRREKMINESL-AILASLDFVLRQEARALFCNQF 257
+ HW +++VDI H T +DS + + + E L + ASL + +E + +
Sbjct: 200 GNSHWVLVIVDIEHRCVTFFDSFYNYIASPQQMREQLEGLAASLGAIYPKEGGSDSDQEE 259
Query: 258 TFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLLLALY 312
FQ+ + + Q P F CG + + Y+++P + + + R LLA +
Sbjct: 260 LLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRALLADF 319
Query: 313 L 313
+
Sbjct: 320 I 320
>sp|B0BAX8|CDUB2_CHLTB Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar L2b (strain UCH-1/proctitis) GN=cdu2 PE=3 SV=1
Length = 339
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 199 SDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILA-SLDFVLRQEARALFCNQF 257
+ HW +++VDI + T +DSL + + E L LA SL + +E A +
Sbjct: 200 GNSHWVLVIVDIEYRCVTFFDSLCDYVASPQQMREQLEGLAVSLGAIYPKEGGADSDQEE 259
Query: 258 TFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLLLALY 312
FQ+ + + Q P F CG + + Y+++P + + + R LLA +
Sbjct: 260 LLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPKNPSERRALLADF 319
Query: 313 L 313
+
Sbjct: 320 I 320
>sp|B0B999|CDUB2_CHLT2 Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar L2 (strain 434/Bu / ATCC VR-902B) GN=cdu2 PE=3
SV=1
Length = 339
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 199 SDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILA-SLDFVLRQEARALFCNQF 257
+ HW +++VDI + T +DSL + + E L LA SL + +E A +
Sbjct: 200 GNSHWVLVIVDIEYRCVTFFDSLCDYVASPQQMREQLEGLAVSLGAIYPKEGGADSDQEE 259
Query: 258 TFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLLLALY 312
FQ+ + + Q P F CG + + Y+++P + + + R LLA +
Sbjct: 260 LLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRALLADF 319
Query: 313 L 313
+
Sbjct: 320 I 320
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 91/247 (36%), Gaps = 68/247 (27%)
Query: 109 GDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYY------SQ 162
G +T + L GE+++ II Y Y +++A ++ F +Y
Sbjct: 745 GGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFFYKCLTRKEN 804
Query: 163 AALADWSSLNFAQAAGFRDRYMSR---LDTCEKIYVPINSDGHWYMLVV----------- 208
D L+ AQ R R +R + + I+VP+N HWY+ V+
Sbjct: 805 NLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYE 864
Query: 209 -----------------------DISHATATIWDSLESPSRRE-------KMINES-LAI 237
+ H T+T++ S E E KM + I
Sbjct: 865 DFPQTVSQEFQDQQSQHDNKTIDNDPHTTSTVFTSAEESQSTETSMSVPKKMCKRPCILI 924
Query: 238 LASLDFV--------LRQ------EARALFCNQFTFLNF-QICRQAGLPQQPNGFDCGYY 282
L SL LR+ E + +F+ N +C + +P+Q N DCG Y
Sbjct: 925 LDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPK--VPKQDNSSDCGVY 982
Query: 283 VMKYMDS 289
+++Y++S
Sbjct: 983 LLQYVES 989
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 72/177 (40%), Gaps = 28/177 (15%)
Query: 113 ITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLN 172
+T + TL W++ ++ MY D D + F +++ + L
Sbjct: 388 LTMDDLGTLYGQNWLNDQVMNMYGDLV------MDTVPEKVHFFNSFF-------YDKLR 434
Query: 173 FAQAAGFRDRYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRR-EK 229
G + R+ +D K + +PI+ + HW ++ VD+ T T +DS + +RR K
Sbjct: 435 TKGYDGVK-RWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPK 493
Query: 230 MINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYVMKY 286
I + L A ++++ + + RQ N DCG +V++Y
Sbjct: 494 HIAKYLQAEA-----VKKDRLDFHQGWKGYFKMNVARQN------NDSDCGAFVLQY 539
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 28/188 (14%)
Query: 102 REIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYS 161
R V + +T + TL W++ ++ MY D D + F +++
Sbjct: 371 RGFRVSYKRHVLTMDDLGTLYGQNWLNDQVMNMYGDLV------MDTVPEKVHFFNSFF- 423
Query: 162 QAALADWSSLNFAQAAGFRDRYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWD 219
+ L G + R+ +D K + +PI+ + HW ++ VD+ T T +D
Sbjct: 424 ------YDKLRTKGYDGVK-RWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFD 476
Query: 220 SLESPSRR-EKMINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPNGFD 278
S + +RR K I + L A ++++ + + RQ N D
Sbjct: 477 SQRTLNRRCPKHIAKYLQAEA-----VKKDRLDFHQGWKGYFKMNVARQN------NDSD 525
Query: 279 CGYYVMKY 286
CG +V++Y
Sbjct: 526 CGAFVLQY 533
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 109 GDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYY------SQ 162
G +T + L GE+++ II Y Y +++A ++ F +Y
Sbjct: 758 GGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFFYKCLTRKEN 817
Query: 163 AALADWSSLNFAQAAGFRDRYMSR-LDTCEK--IYVPINSDGHWYMLVV 208
D +L+ AQ R R +R ++ K I+VP+N HWY+ V+
Sbjct: 818 NLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVI 866
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 109 GDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYY------SQ 162
G +T + L GE+++ II Y Y +++A ++ F +Y
Sbjct: 755 GGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFFYKCLTRKEN 814
Query: 163 AALADWSSLNFAQAAGFRDRYMSR---LDTCEKIYVPINSDGHWYMLVV 208
D +L+ AQ R R +R + + I+VP+N HWY+ V+
Sbjct: 815 NLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVI 863
>sp|B2VL36|OTC_ERWT9 Ornithine carbamoyltransferase OS=Erwinia tasmaniensis (strain DSM
17950 / Et1/99) GN=argI PE=3 SV=1
Length = 336
Score = 35.0 bits (79), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 133 TMYADYKNMKEA-EKDVTSPRCWFLPTYYSQAALADWSSLNFAQAAGFRDRYMSRLDTCE 191
T Y KN+ EKD T RC F + Q A W + +Q G ++
Sbjct: 40 TQYLKGKNIALIFEKDSTRTRCSFEVAAFDQGANVTWLGPSGSQ-IGHKESIKDTARVLG 98
Query: 192 KIYVPINSDGHWYMLVVDIS-HATATIWDSL 221
++Y I GH LV ++ HA +W+ L
Sbjct: 99 RMYHAIQYRGHGQQLVESLAEHAGVPVWNGL 129
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 35.0 bits (79), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 90/247 (36%), Gaps = 68/247 (27%)
Query: 109 GDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYY------SQ 162
G +T + L GE+++ II Y Y +++A ++ F +Y
Sbjct: 745 GGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFFYKCLTRKEN 804
Query: 163 AALADWSSLNFAQAAGFRDRYMSR---LDTCEKIYVPINSDGHWYMLVV----------- 208
D L+ AQ R R +R + + I+VP+N HWY+ V+
Sbjct: 805 NLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYE 864
Query: 209 -----------------------DISHATATIWDSLESPSRRE-------KMINES-LAI 237
+ H T+T+ S E E KM + I
Sbjct: 865 DCPQTVSQQFQGQQSQHDHKMTDNDPHTTSTVSTSAEDSQSTEVNMSVPKKMCKRPCILI 924
Query: 238 LASLDFV--------LRQ------EARALFCNQFTFLNF-QICRQAGLPQQPNGFDCGYY 282
L SL LR+ E + +F+ N +C + +P+Q N DCG Y
Sbjct: 925 LDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPK--VPKQDNSSDCGVY 982
Query: 283 VMKYMDS 289
+++Y++S
Sbjct: 983 LLQYVES 989
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 34.7 bits (78), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 201 GHWYMLVVDISHATATIWDSLESPSRRE--KMINESLAILASLDFVLRQEARALFCNQFT 258
G W++ + DSL PSR K++ E L + ++ +++ ++ F
Sbjct: 959 GQWHLKPTICKQPCILLMDSLRGPSRSNVVKILREYLEV----EWEVKKGSKRSFSK--- 1011
Query: 259 FLNFQICRQAGLPQQPNGFDCGYYVMKYMDS 289
+ +PQQ N DCG YV++Y++S
Sbjct: 1012 --DVMKGSNPKVPQQNNFSDCGVYVLQYVES 1040
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 109 GDNSITRSSMRTLLPGEWIDGDIITMYADY---KNMKEAEKDVTSPRCWFLPTYYSQAAL 165
G S+T + L GE+++ II Y Y + +K+ + D F +Q
Sbjct: 664 GGISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDADRIHIFSSFFYKRLNQRER 723
Query: 166 ADWSSLNFA---QAAGFRDRYMSRLDTCEK--IYVPINSDGHWYMLVV 208
+ + N + + G + +D EK I+VP+N HW++ VV
Sbjct: 724 RNHETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVV 771
>sp|Q556M4|C5082_DICDI Probable cytochrome P450 508A2 OS=Dictyostelium discoideum
GN=cyp508A2-1 PE=3 SV=1
Length = 493
Score = 34.7 bits (78), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 16/122 (13%)
Query: 24 NVISKSCRLRFSVGPFTIPSPISEDAKQLI-LYLFD-DKLNTMYDLIYTNCFYDNCICKV 81
N SK RL + P P PI + QL L FD K++ Y I+ D V
Sbjct: 17 NAYSKYKRLNENQLPGPFPIPILGNIYQLTNLPHFDLTKMSEKYGKIFRIYLADLYTVIV 76
Query: 82 CSNIIILLLFVEITPFFHGKREIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNM 141
C II RE+ VD DN I R + ++ G + G + +M ++KN
Sbjct: 77 CDPII--------------ARELFVDKFDNFIDRPKIPSVKHGTFYHGTVASMGDNWKNN 122
Query: 142 KE 143
KE
Sbjct: 123 KE 124
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 201 GHWYMLVVDISHATATIWDSLESPSRRE--KMINESLAILASLDFVLRQEARALFCNQFT 258
G W++ + DSL PSR K++ E L + ++ +++ ++ F
Sbjct: 978 GQWHLKPTVCKQPCILLMDSLRGPSRSNVVKILREYLEV----EWEVKKGSKRSFSK--- 1030
Query: 259 FLNFQICRQAGLPQQPNGFDCGYYVMKYMDS 289
+ +PQQ N DCG YV++Y++S
Sbjct: 1031 --DVMKGSNPKVPQQNNFSDCGVYVLQYVES 1059
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 109 GDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYS-----QA 163
G S+T + L GE+++ II Y Y +++ +K+ F +Y +
Sbjct: 684 GGISVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLKKEDADRIHIFSSFFYKRLNQRER 743
Query: 164 ALADWSSLNFAQAAGFRDRYMSR-LDTCEK--IYVPINSDGHWYMLVV 208
+ ++L+ Q R + +R +D EK I+VP+N HW++ VV
Sbjct: 744 RNPETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVV 791
>sp|Q9R9D6|RFAP_ECOLX Lipopolysaccharide core heptose(I) kinase RfaP OS=Escherichia coli
GN=rfaP PE=1 SV=1
Length = 265
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 79 CKVCSNIIILLLFVEITPFFHGKREIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADY 138
C +C ++ L PF + E+ + + D + R+ +RT +P W D D+I +Y
Sbjct: 163 CYICHFLLHL-------PFSGKEEELKISVID--LHRAQLRTRVPRRWRDKDLIGLYFSS 213
Query: 139 KNMKEAEKDVTSPRCWFLPTYYSQAALAD 167
N+ ++D+ W Y A L D
Sbjct: 214 MNIGLTQRDI-----WRFMKVYFAAPLKD 237
>sp|O13612|NEP2_SCHPO NEDD8-specific protease 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=nep2 PE=1 SV=1
Length = 415
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 27/99 (27%)
Query: 193 IYVPIN--------SDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILASLDFV 244
I++PIN S HW +LVV + +DS+ + + N+ + +L +
Sbjct: 154 IFLPINDTNECGIESGSHWSLLVVSVEKGLGWYYDSMSNGN-----TNDCNLAIKNLGIL 208
Query: 245 LRQEARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYV 283
L++E R R PQQ N DCG +V
Sbjct: 209 LKKEFR--------------VRHMKTPQQINDCDCGLHV 233
>sp|O42980|NEP1_SCHPO NEDD8-specific protease 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=nep1 PE=1 SV=2
Length = 420
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 37/150 (24%)
Query: 154 WFLPTYYSQAA--LADWSSLNF--AQAA----GFRDRYMSRLDTCEKIYVPIN------- 198
WF P+Y +QA L SL F A+AA + +L C+ +++PIN
Sbjct: 45 WF-PSYPNQANEILLLRPSLVFLLAEAAISPEELKVALPKKLMNCKYLFMPINDLDKHAA 103
Query: 199 --SDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILASLDFVLRQEARALFCNQ 256
HW ++V I +DSL + + K +LA ++ L F +
Sbjct: 104 GSGGSHWSLMVASIPDGQCYYYDSLSN--GKTKDCRSALARVSDL-----------FKKK 150
Query: 257 FTFLNFQICRQAGLPQQPNGFDCGYYVMKY 286
FT + QQ NG+DCG +V +
Sbjct: 151 FTIECMPVQ------QQRNGYDCGAHVCAF 174
>sp|P40537|ULP2_YEAST Ubiquitin-like-specific protease 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP2 PE=1 SV=1
Length = 1034
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 83/209 (39%), Gaps = 34/209 (16%)
Query: 112 SITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTS-PRCWFLPTYYSQAALADWSS 170
+IT + L +W++ I+ + + EK + + + +++ ++
Sbjct: 443 TITNQDFKCLFNKDWVNDSILDFFTKFYIESSIEKSIIKREQVHLMSSFFYTKLIS---- 498
Query: 171 LNFAQAAGFRDRYMSRLDTCEKIYV--PINSDGHWYM-LVVDIS-----HATATIWDSLE 222
N A ++++ D K YV PIN HW+ ++ ++ H D++
Sbjct: 499 -NPADYYSNVKKWVNNTDLFSKKYVVIPINISYHWFSCIITNLDAILDFHQNKDKNDAIN 557
Query: 223 SPSRREKMINESLAILASLDFVLRQEARAL-----FCNQFTFLNFQI--------CRQAG 269
S E IN L + + D + + +R + F + + I +
Sbjct: 558 S---DEISINNPLVNILTFDSLRQTHSREIDPIKEFLISYALDKYSIQLDKTQIKMKTCP 614
Query: 270 LPQQPNGFDCGYYVM----KYMDSPCIVV 294
+PQQPN DCG +V+ K+ ++P +
Sbjct: 615 VPQQPNMSDCGVHVILNIRKFFENPVETI 643
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,909,116
Number of Sequences: 539616
Number of extensions: 4746186
Number of successful extensions: 12033
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 11973
Number of HSP's gapped (non-prelim): 55
length of query: 332
length of database: 191,569,459
effective HSP length: 118
effective length of query: 214
effective length of database: 127,894,771
effective search space: 27369480994
effective search space used: 27369480994
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)