BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020019
MALSLCSAKSLLFFFVISAIPVAYIISQERANPATHVYHYHSSSFFRECAKWDDSGRRFI
VSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG
NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG
EFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIK
LIRVAGGPLSFGDGLELLSPTKLVVAGNPSARLVESSDGWETAAVVAKFSGPVHRLATAA
TVKDGRVYLNHMLGFGYPKKKHALVEAVFSNN

High Scoring Gene Products

Symbol, full name Information P value
AT2G16760 protein from Arabidopsis thaliana 4.2e-111
AT2G47370 protein from Arabidopsis thaliana 1.6e-104
AT5G28660 protein from Arabidopsis thaliana 1.0e-36
AT2G01410 protein from Arabidopsis thaliana 2.9e-23
DR_A0202
Superoxide dismutase (SodC), Cu-Zn family
protein from Deinococcus radiodurans R1 0.00021

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020019
        (332 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2059934 - symbol:AT2G16760 "AT2G16760" species...  1097  4.2e-111  1
TAIR|locus:2065170 - symbol:AT2G47370 "AT2G47370" species...  1035  1.6e-104  1
TAIR|locus:2148820 - symbol:AT5G28660 "AT5G28660" species...   327  1.0e-36   2
TAIR|locus:2038751 - symbol:AT2G01410 "AT2G01410" species...   268  2.9e-23   1
UNIPROTKB|Q9RYV4 - symbol:DR_A0202 "Superoxide dismutase ...   120  0.00021   1


>TAIR|locus:2059934 [details] [associations]
            symbol:AT2G16760 "AT2G16760" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0005783 "endoplasmic
            reticulum" evidence=IDA] GO:GO:0005783 EMBL:CP002685
            GenomeReviews:CT485783_GR Gene3D:2.120.10.30 InterPro:IPR011042
            EMBL:AC005825 InterPro:IPR013658 Pfam:PF08450 HOGENOM:HOG000006172
            ProtClustDB:CLSN2683599 EMBL:AY084811 EMBL:BT005598 EMBL:AK118249
            IPI:IPI00533556 PIR:H84543 RefSeq:NP_565392.1 UniGene:At.40241
            ProteinModelPortal:Q9SLE2 SMR:Q9SLE2 PaxDb:Q9SLE2 PRIDE:Q9SLE2
            EnsemblPlants:AT2G16760.1 GeneID:816177 KEGG:ath:AT2G16760
            TAIR:At2g16760 eggNOG:NOG268509 InParanoid:Q9SLE2 OMA:TDAKASK
            PhylomeDB:Q9SLE2 ArrayExpress:Q9SLE2 Genevestigator:Q9SLE2
            Uniprot:Q9SLE2
        Length = 327

 Score = 1097 (391.2 bits), Expect = 4.2e-111, P = 4.2e-111
 Identities = 216/332 (65%), Positives = 260/332 (78%)

Query:     1 MALSLCSAK-SLLFFFVISAIPVAYIISQERANPATHVYHYHSSSFFRECAKWDDSGRRF 59
             M+ S CS + +   F VISA+P+AY+IS E A P+THV+ Y SS FFRECAKWDD GRRF
Sbjct:     1 MSPSFCSGRCTAALFLVISAVPIAYLISLELAVPSTHVFSYQSSGFFRECAKWDDVGRRF 60

Query:    60 IVSFLDGG-IGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADV 118
             +VSF+DGG +G++ VP D     VLEEVTLVKD++L GN SLG+ +DH RNRLLV  AD+
Sbjct:    61 LVSFMDGGGVGEI-VPKD--SDDVLEEVTLVKDVDLAGNASLGIAIDHVRNRLLVAVADL 117

Query:   119 FGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGV 178
              GN+YSA+AAYDLSTW RLFL +LSG S  K+ ADDV VD +GNAYVTD   SKIWKV V
Sbjct:   118 LGNRYSALAAYDLSTWRRLFLAELSGQSKEKTFADDVAVDEQGNAYVTDAKASKIWKVDV 177

Query:   179 KGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEE 238
              G+ ++ I+SPLFTP  WY NLV LNGIVYHPDGFLIVIHTFSG L+KID+ +G     +
Sbjct:   178 NGKLVNTITSPLFTPPGWYNNLVALNGIVYHPDGFLIVIHTFSGYLYKIDLTNG-DVSNQ 236

Query:   239 IKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSARLVESSDGWETAAVVAKFS-GPVHRLA 297
             + +I V+GG L FGDGLELLSPTK+VVAG+ S +LVESSDGW TA+V   FS G VHR+ 
Sbjct:   237 VSVIDVSGGTLRFGDGLELLSPTKIVVAGSSSTKLVESSDGWRTASVTGWFSSGMVHRVV 296

Query:   298 TAATVKDGRVYLNHMLGFGYPKKKHALVEAVF 329
             ++ATVK+GRVYLNH++GFG  KKKH LVEAVF
Sbjct:   297 SSATVKEGRVYLNHIVGFG-SKKKHVLVEAVF 327


>TAIR|locus:2065170 [details] [associations]
            symbol:AT2G47370 "AT2G47370" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002685
            GenomeReviews:CT485783_GR Gene3D:2.120.10.30 InterPro:IPR011042
            EMBL:AC002337 EMBL:BT031352 IPI:IPI00525394 PIR:D84914
            RefSeq:NP_182259.1 UniGene:At.12229 UniGene:At.73034
            ProteinModelPortal:O22911 SMR:O22911 PaxDb:O22911 PRIDE:O22911
            EnsemblPlants:AT2G47370.1 GeneID:819350 KEGG:ath:AT2G47370
            TAIR:At2g47370 eggNOG:NOG247194 HOGENOM:HOG000006172
            InParanoid:O22911 OMA:STHVISY PhylomeDB:O22911
            ProtClustDB:CLSN2683599 Genevestigator:O22911 Uniprot:O22911
        Length = 330

 Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
 Identities = 207/334 (61%), Positives = 252/334 (75%)

Query:     1 MALSLCSAK-SL-LFFFVISAIPVAYIISQERANPATHVYHYHSSSFFRECAKWDDSGRR 58
             M+ S CS K S+ LFFF++SA+P+AYIIS E+A P+THV  YHSS F RECAKWDD GRR
Sbjct:     1 MSPSCCSGKYSVALFFFILSAVPIAYIISSEKAVPSTHVISYHSSGFLRECAKWDDVGRR 60

Query:    59 FIVSFLDGG--IGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAA 116
             F+VS++DGG  IG++    D     VL+EVTLVKD++L GN S G V+D  RNRLL+   
Sbjct:    61 FLVSYMDGGGGIGELVPTKD--SDDVLKEVTLVKDVDLAGNSSNGFVIDRHRNRLLLAVG 118

Query:   117 DVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKV 176
             D+ GN+YSA+ AYDLSTW RLFLT LS  S   + ADDV VD +GNAYV+D  G KIW V
Sbjct:   119 DLLGNRYSALVAYDLSTWRRLFLTVLSSHSKEITYADDVAVDTQGNAYVSDAKGGKIWVV 178

Query:   177 GVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEG 236
              V G+ +  I SPLFT   WY N V LNGIVYHP+GFLIVIHTFSG L+KID+ +G    
Sbjct:   179 DVNGKLVYTIRSPLFTTPGWYNNFVSLNGIVYHPEGFLIVIHTFSGFLYKIDVTNG-DVS 237

Query:   237 EEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSARLVESSDGWETAAVVAKFS-GPVHR 295
              ++ +I V+GG L FGDGLE LSPTK+VVAG+PS++LVESSDGW TA+V   FS G VHR
Sbjct:   238 SKVTVIDVSGGSLRFGDGLEFLSPTKIVVAGSPSSKLVESSDGWRTASVTGWFSSGMVHR 297

Query:   296 LATAATVKDGRVYLNHMLGFGYPKKKHALVEAVF 329
             L ++ATVK+GRVYLNH++GFG  KK+H LVEAVF
Sbjct:   298 LVSSATVKEGRVYLNHIVGFG-SKKRHILVEAVF 330


>TAIR|locus:2148820 [details] [associations]
            symbol:AT5G28660 "AT5G28660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 Gene3D:2.120.10.30 InterPro:IPR011042
            IPI:IPI00544450 RefSeq:NP_198218.1 UniGene:At.55077
            ProteinModelPortal:F4K8K6 SMR:F4K8K6 EnsemblPlants:AT5G28660.1
            GeneID:832972 KEGG:ath:AT5G28660 PhylomeDB:F4K8K6 Uniprot:F4K8K6
        Length = 174

 Score = 327 (120.2 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
 Identities = 70/127 (55%), Positives = 84/127 (66%)

Query:    66 GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125
             GGIG++    D     VLEEVTLV D++L  N S G V+D  RNRLL+   D+ GN+YSA
Sbjct:     5 GGIGELVPTKD--SDNVLEEVTLVNDVDLADNSSNGFVIDRHRNRLLLAVGDLLGNRYSA 62

Query:   126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSI 185
             + AYDLSTW  LFLT LS  S   + ADDV VD +GNAYV+D  G KIW V V G+ +  
Sbjct:    63 LVAYDLSTWRHLFLTVLS--SHKITYADDVAVDTQGNAYVSDAKGGKIWIVDVNGKLVYT 120

Query:   186 ISSPLFT 192
             I SPLFT
Sbjct:   121 IRSPLFT 127

 Score = 84 (34.6 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
 Identities = 16/25 (64%), Positives = 20/25 (80%)

Query:   239 IKLIRVAGGPLSFGDGLELLSPTKL 263
             + +I V+GG L FGDGLE LSPTK+
Sbjct:   130 VTIIDVSGGNLRFGDGLEFLSPTKI 154


>TAIR|locus:2038751 [details] [associations]
            symbol:AT2G01410 "AT2G01410" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005774 "vacuolar membrane"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0005783 "endoplasmic reticulum" evidence=IDA] GO:GO:0005783
            GO:GO:0005886 GO:GO:0005774 EMBL:CP002685 Gene3D:2.120.10.30
            InterPro:IPR011042 EMBL:AC006200 EMBL:AC005560 UniGene:At.32408
            EMBL:AY735571 EMBL:AY924735 IPI:IPI00544408 PIR:D84424
            RefSeq:NP_178250.1 UniGene:At.46305 UniGene:At.75648
            ProteinModelPortal:Q9ZNQ5 SMR:Q9ZNQ5 PRIDE:Q9ZNQ5
            EnsemblPlants:AT2G01410.1 GeneID:814669 KEGG:ath:AT2G01410
            TAIR:At2g01410 HOGENOM:HOG000005792 InParanoid:Q9ZNQ5 OMA:FWRFQMK
            PhylomeDB:Q9ZNQ5 ProtClustDB:CLSN2683530 ArrayExpress:Q9ZNQ5
            Genevestigator:Q9ZNQ5 Uniprot:Q9ZNQ5
        Length = 387

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 98/318 (30%), Positives = 149/318 (46%)

Query:     9 KSLLFFFVISAIPVAYIISQERANPATHVYHYHSSSFFRECAKWDDSGRRFIVSFLDGGI 68
             +S   F ++ A+    ++    A+   HV ++ S   + E   WD   + F+V    G +
Sbjct:    14 RSFFVFPILFAVLFLGLLIPSSADNR-HVINFRSPGLYPEGLTWDPRDQHFLV----GSL 68

Query:    69 GQVAVPDDYPPGTVLEEVTLVKDLELTGNGS-LGLVLDHPRNRLLVVAADVFG-NKYSAV 126
                 +      G V+E  TL+ DL+L  N + LGL +D    RLL     +     +SA+
Sbjct:    69 HSRTIHSVSDAG-VIE--TLISDLDLPENSTILGLAVDSTNRRLLACIQSLPPLPPFSAL 125

Query:   127 AAYDL-STWNRLFLTQL-SGPSD----GKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG 180
             A+YDL S   R+FL+ L S P D     +  A+DV VD +GNAYVT+   + IWKV   G
Sbjct:   126 ASYDLRSGGRRVFLSPLPSLPGDDEDIARDVANDVAVDFKGNAYVTNSAKNFIWKVDRDG 185

Query:   181 EFLSIIS-SPLFTPKEWYKNL------VGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGV 233
                SI S SPLF  +    +        GLNGIVY   G+L+V+ + +G +FK+D   G 
Sbjct:   186 A-ASIFSKSPLFNSQPVAADADASFRDCGLNGIVYISKGYLLVVQSNTGKVFKVDEDSG- 243

Query:   234 GEGEEIKLIRVAGGPLSFGDGL-ELLSPTKLVVAGNPSARLVESSDGWETAAVVAKFSGP 292
                   +L+ +  G L   DG+        ++V       L++S D W    V  +    
Sbjct:   244 ----NARLV-LLNGDLIAADGMTRRRRDGTVMVVSQKKLWLLKSQDSWSEGVVYDEIDLD 298

Query:   293 VHRLATAATVKD-GRVYL 309
             +    TA TV    R+Y+
Sbjct:   299 IEGFPTAVTVAGRDRIYV 316


>UNIPROTKB|Q9RYV4 [details] [associations]
            symbol:DR_A0202 "Superoxide dismutase [Cu-Zn]"
            species:243230 "Deinococcus radiodurans R1" [GO:0004784 "superoxide
            dismutase activity" evidence=IBA] [GO:0005507 "copper ion binding"
            evidence=IBA] [GO:0008270 "zinc ion binding" evidence=IBA]
            [GO:0019430 "removal of superoxide radicals" evidence=IBA]
            [GO:0042597 "periplasmic space" evidence=IBA] InterPro:IPR001424
            InterPro:IPR024134 Pfam:PF00080 Gene3D:2.120.10.30
            InterPro:IPR011042 GO:GO:0008270 GO:GO:0005507 GO:GO:0042597
            GO:GO:0019430 InterPro:IPR013658 Pfam:PF08450 GO:GO:0004784
            Gene3D:2.60.40.200 PANTHER:PTHR10003 SUPFAM:SSF49329 HSSP:P00441
            EMBL:AE001825 GenomeReviews:AE001825_GR KO:K04565 PIR:B75617
            RefSeq:NP_285525.1 ProteinModelPortal:Q9RYV4 GeneID:1798149
            KEGG:dra:DR_A0202 PATRIC:21633444 HOGENOM:HOG000225585 OMA:HANGECA
            ProtClustDB:CLSK701776 BioCyc:DRAD243230:GH46-201-MONOMER
            Uniprot:Q9RYV4
        Length = 462

 Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
 Identities = 62/208 (29%), Positives = 103/208 (49%)

Query:    99 SLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVD 158
             +LGL +D P+ RL +      G     V+   + T + + L  L  P   +   +D+ + 
Sbjct:   245 ALGLKVD-PQGRLWIA-----GGAQGTVS---ILTPDGMTLAVLETPKSPRPYINDLVLA 295

Query:   159 AEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVI 217
              +GN YVTD +   I++V  K   L+       TP + Y   V LNGI   PDG +L+ +
Sbjct:   296 PDGNFYVTDSSRPVIFRVD-KALKLTAWLDLAGTPIK-YGPGVNLNGIAATPDGKYLLAV 353

Query:   218 HTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS---ARLV 274
                +G L++ID+     + + +K  +V  G ++ GDGL LL    L VA N     A++ 
Sbjct:   354 QLNTGELWRIDL-----KTKAVK--KVMDGLVN-GDGL-LLDGRTLYVARNKDQVVAKVS 404

Query:   275 ESSDGWETAAVVAKFSGPVHRLATAATV 302
              S+D + +  +VA+   P++ L   AT+
Sbjct:   405 LSAD-YGSGQLVAQ--EPLNGLRFPATL 429


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      332       332   0.00090  116 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  230 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.68u 0.12s 25.80t   Elapsed:  00:00:01
  Total cpu time:  25.68u 0.12s 25.80t   Elapsed:  00:00:01
  Start:  Mon May 20 22:36:51 2013   End:  Mon May 20 22:36:52 2013

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