Query 020019
Match_columns 332
No_of_seqs 167 out of 1652
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 10:33:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020019.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020019hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p9w_A MAL S 1 allergenic prot 100.0 3.7E-27 1.3E-31 214.7 26.6 266 33-318 1-310 (334)
2 3g4e_A Regucalcin; six bladed 99.9 1.4E-24 4.7E-29 197.2 26.2 250 41-330 9-281 (297)
3 2p4o_A Hypothetical protein; p 99.9 1.9E-23 6.4E-28 190.7 29.6 257 43-330 30-295 (306)
4 2fp8_A Strictosidine synthase; 99.9 4E-24 1.4E-28 196.2 25.0 251 35-317 9-306 (322)
5 3e5z_A Putative gluconolactona 99.9 2.7E-21 9.2E-26 174.6 30.3 231 41-312 24-276 (296)
6 1q7f_A NHL, brain tumor CG1071 99.9 2.8E-20 9.6E-25 166.8 31.9 233 46-312 31-269 (286)
7 3dr2_A Exported gluconolactona 99.9 1.2E-20 4.3E-25 171.6 27.3 229 41-312 41-296 (305)
8 2qe8_A Uncharacterized protein 99.9 2.9E-20 1E-24 172.2 29.7 253 45-312 17-309 (343)
9 3fvz_A Peptidyl-glycine alpha- 99.9 9.2E-21 3.1E-25 174.4 26.1 248 46-317 25-315 (329)
10 1rwi_B Serine/threonine-protei 99.9 7.2E-21 2.5E-25 168.7 22.5 231 46-318 25-258 (270)
11 1npe_A Nidogen, entactin; glyc 99.9 5.9E-20 2E-24 163.8 28.1 216 45-302 36-258 (267)
12 2qc5_A Streptogramin B lactona 99.9 2.3E-19 7.7E-24 160.7 30.9 235 38-313 13-249 (300)
13 3sre_A PON1, serum paraoxonase 99.9 3.4E-19 1.2E-23 165.5 31.1 244 45-314 50-348 (355)
14 3v64_C Agrin; beta propeller, 99.9 1.2E-19 4.2E-24 168.8 27.6 216 45-302 73-294 (349)
15 2qc5_A Streptogramin B lactona 99.9 5.5E-19 1.9E-23 158.2 29.2 227 45-312 62-290 (300)
16 2z2n_A Virginiamycin B lyase; 99.9 7.3E-19 2.5E-23 157.3 29.7 235 39-314 9-245 (299)
17 2ghs_A AGR_C_1268P; regucalcin 99.9 1.7E-19 5.9E-24 165.9 26.1 247 44-330 48-311 (326)
18 3v65_B Low-density lipoprotein 99.9 1.5E-19 5.2E-24 170.5 25.7 216 45-302 116-337 (386)
19 4hw6_A Hypothetical protein, I 99.9 7E-19 2.4E-23 168.4 30.5 239 46-315 140-424 (433)
20 3hrp_A Uncharacterized protein 99.9 9E-19 3.1E-23 166.4 30.5 239 46-315 132-401 (409)
21 2z2n_A Virginiamycin B lyase; 99.9 2E-18 6.8E-23 154.4 31.1 228 44-312 56-284 (299)
22 1ijq_A LDL receptor, low-densi 99.9 1.2E-18 4.2E-23 159.8 30.2 221 43-302 28-257 (316)
23 2dg1_A DRP35, lactonase; beta 99.8 2.8E-18 9.4E-23 156.9 30.1 241 40-314 40-301 (333)
24 1pjx_A Dfpase, DIISOPROPYLFLUO 99.8 1.1E-18 3.7E-23 157.9 25.4 238 41-313 14-288 (314)
25 3tc9_A Hypothetical hydrolase; 99.8 3.6E-18 1.2E-22 163.3 27.8 241 46-315 138-421 (430)
26 3sov_A LRP-6, low-density lipo 99.8 2.2E-18 7.6E-23 158.3 24.5 216 46-302 36-257 (318)
27 3p5b_L Low density lipoprotein 99.8 1.1E-17 3.6E-22 158.6 29.1 222 45-302 112-339 (400)
28 3hrp_A Uncharacterized protein 99.8 1.4E-17 4.8E-22 158.2 29.6 211 44-272 171-402 (409)
29 1rwi_B Serine/threonine-protei 99.8 2.3E-18 7.7E-23 152.5 22.4 188 45-270 67-254 (270)
30 3v64_C Agrin; beta propeller, 99.8 1E-17 3.5E-22 155.9 25.5 224 51-317 40-268 (349)
31 3v65_B Low-density lipoprotein 99.8 1.8E-17 6.3E-22 156.2 27.3 224 51-317 83-311 (386)
32 1npe_A Nidogen, entactin; glyc 99.8 3.9E-17 1.3E-21 145.4 27.3 223 58-318 4-232 (267)
33 3fvz_A Peptidyl-glycine alpha- 99.8 6.7E-18 2.3E-22 155.2 21.5 207 46-269 92-311 (329)
34 3dsm_A Uncharacterized protein 99.8 2.9E-17 1E-21 151.1 25.8 217 44-302 83-319 (328)
35 1q7f_A NHL, brain tumor CG1071 99.8 3E-17 1E-21 146.9 24.9 191 45-269 77-270 (286)
36 3dsm_A Uncharacterized protein 99.8 1.3E-16 4.5E-21 146.7 27.6 226 45-311 44-285 (328)
37 1ijq_A LDL receptor, low-densi 99.8 2.7E-16 9.2E-21 144.2 29.1 214 65-317 9-231 (316)
38 3m0c_C LDL receptor, low-densi 99.8 1.4E-16 4.8E-21 162.4 29.8 223 44-302 423-651 (791)
39 2ism_A Putative oxidoreductase 99.8 9.2E-17 3.1E-21 149.6 26.1 255 39-313 24-334 (352)
40 3kya_A Putative phosphatase; s 99.8 1.7E-16 5.8E-21 153.0 28.2 246 46-313 140-464 (496)
41 4a0p_A LRP6, LRP-6, low-densit 99.8 1.2E-16 4E-21 159.6 27.0 195 46-279 38-238 (628)
42 3a9g_A Putative uncharacterize 99.8 1.9E-16 6.5E-21 147.6 26.8 256 38-312 21-330 (354)
43 4hw6_A Hypothetical protein, I 99.8 6.9E-17 2.3E-21 154.6 23.5 201 44-269 181-422 (433)
44 3p5b_L Low density lipoprotein 99.8 8.9E-16 3.1E-20 145.3 29.7 214 65-318 91-314 (400)
45 3s94_A LRP-6, low-density lipo 99.8 7.3E-16 2.5E-20 153.7 29.6 197 46-279 350-552 (619)
46 1n7d_A LDL receptor, low-densi 99.8 1.8E-17 6E-22 167.7 17.9 220 44-302 405-633 (699)
47 3tc9_A Hypothetical hydrolase; 99.8 3.9E-16 1.3E-20 149.2 26.4 202 43-269 177-419 (430)
48 3s94_A LRP-6, low-density lipo 99.7 2.4E-16 8.3E-21 157.1 25.4 198 46-279 41-244 (619)
49 3sov_A LRP-6, low-density lipo 99.7 3E-16 1E-20 144.1 24.0 214 65-317 12-231 (318)
50 2qe8_A Uncharacterized protein 99.7 2.9E-16 1E-20 145.2 23.3 206 45-270 67-311 (343)
51 3vgz_A Uncharacterized protein 99.7 4.9E-15 1.7E-19 135.4 30.2 234 44-315 40-294 (353)
52 3vgz_A Uncharacterized protein 99.7 3.6E-14 1.2E-18 129.6 35.7 237 45-318 89-339 (353)
53 3kya_A Putative phosphatase; s 99.7 1.1E-15 3.8E-20 147.3 24.5 209 46-275 187-472 (496)
54 3das_A Putative oxidoreductase 99.7 1E-14 3.5E-19 134.8 29.8 263 37-318 23-334 (347)
55 4a0p_A LRP6, LRP-6, low-densit 99.7 4.9E-15 1.7E-19 147.9 28.7 214 64-318 13-231 (628)
56 3m0c_C LDL receptor, low-densi 99.7 6.3E-15 2.1E-19 150.3 28.8 216 65-317 403-625 (791)
57 2fp8_A Strictosidine synthase; 99.7 1.6E-15 5.3E-20 138.8 21.7 191 46-269 81-302 (322)
58 2iwa_A Glutamine cyclotransfer 99.7 1.1E-14 3.9E-19 129.7 25.0 191 45-269 21-226 (266)
59 3g4e_A Regucalcin; six bladed 99.7 6E-15 2.1E-19 133.4 23.3 193 45-269 54-262 (297)
60 3hfq_A Uncharacterized protein 99.7 2.2E-14 7.7E-19 131.6 27.0 248 43-315 38-308 (347)
61 3e5z_A Putative gluconolactona 99.7 3E-14 1E-18 128.2 27.1 201 42-278 66-286 (296)
62 3q6k_A 43.2 kDa salivary prote 99.7 8.1E-14 2.8E-18 129.8 27.1 258 42-315 23-346 (381)
63 2p4o_A Hypothetical protein; p 99.7 4.8E-14 1.6E-18 128.2 25.2 194 44-269 71-278 (306)
64 3u4y_A Uncharacterized protein 99.6 2.5E-13 8.7E-18 123.3 29.3 240 44-316 40-296 (331)
65 2g8s_A Glucose/sorbosone dehyd 99.6 3.5E-14 1.2E-18 132.1 23.0 250 46-311 19-340 (353)
66 3dr2_A Exported gluconolactona 99.6 9.8E-14 3.3E-18 125.8 24.4 193 43-271 84-299 (305)
67 1n7d_A LDL receptor, low-densi 99.6 3.1E-15 1.1E-19 151.2 15.7 215 65-318 385-608 (699)
68 2iwa_A Glutamine cyclotransfer 99.6 6.4E-14 2.2E-18 124.8 22.0 192 98-316 22-229 (266)
69 2dg1_A DRP35, lactonase; beta 99.6 7.8E-14 2.7E-18 127.2 22.1 203 44-269 86-300 (333)
70 3nol_A Glutamine cyclotransfer 99.6 4.6E-13 1.6E-17 118.3 25.3 188 45-267 43-243 (262)
71 3mbr_X Glutamine cyclotransfer 99.6 3.3E-13 1.1E-17 118.2 23.7 191 42-267 18-222 (243)
72 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.3E-13 4.4E-18 124.3 21.4 193 45-269 71-288 (314)
73 3hfq_A Uncharacterized protein 99.6 1.5E-12 5E-17 119.4 27.7 236 43-302 84-339 (347)
74 3nok_A Glutaminyl cyclase; bet 99.6 6.7E-13 2.3E-17 117.3 23.1 187 45-267 55-253 (268)
75 3no2_A Uncharacterized protein 99.5 5.6E-12 1.9E-16 113.1 27.5 223 56-314 5-233 (276)
76 3scy_A Hypothetical bacterial 99.5 7.4E-12 2.5E-16 115.4 26.8 242 43-314 48-327 (361)
77 2ism_A Putative oxidoreductase 99.5 6.5E-13 2.2E-17 123.5 19.6 203 98-317 32-290 (352)
78 1l0q_A Surface layer protein; 99.5 4.9E-11 1.7E-15 110.6 31.8 220 45-311 32-262 (391)
79 3c75_H MADH, methylamine dehyd 99.5 4.2E-12 1.4E-16 120.6 24.1 216 43-279 117-403 (426)
80 3nol_A Glutamine cyclotransfer 99.5 3.3E-12 1.1E-16 112.8 21.2 181 99-312 45-244 (262)
81 3u4y_A Uncharacterized protein 99.5 1.4E-11 4.7E-16 111.7 25.7 223 51-312 4-240 (331)
82 3mbr_X Glutamine cyclotransfer 99.5 1.5E-11 5.1E-16 107.7 24.5 186 98-312 22-223 (243)
83 2ghs_A AGR_C_1268P; regucalcin 99.5 7.2E-12 2.5E-16 114.8 23.5 190 46-269 91-292 (326)
84 3no2_A Uncharacterized protein 99.5 1.1E-10 3.7E-15 104.7 30.4 191 45-268 37-231 (276)
85 2ece_A 462AA long hypothetical 99.5 2.9E-11 9.9E-16 114.4 27.0 241 54-312 93-400 (462)
86 2oiz_A Aromatic amine dehydrog 99.5 1.6E-11 5.6E-16 114.2 24.7 241 43-305 49-359 (361)
87 3qqz_A Putative uncharacterize 99.5 6.3E-11 2.1E-15 104.9 27.1 196 98-311 28-241 (255)
88 3qqz_A Putative uncharacterize 99.5 2.3E-11 8E-16 107.6 24.3 208 46-277 28-251 (255)
89 1ri6_A Putative isomerase YBHE 99.5 2.2E-10 7.6E-15 103.5 30.7 242 43-312 36-296 (343)
90 1ri6_A Putative isomerase YBHE 99.5 6.3E-11 2.1E-15 107.2 26.8 230 46-302 85-330 (343)
91 3nok_A Glutaminyl cyclase; bet 99.4 3.9E-12 1.3E-16 112.4 17.7 182 99-312 57-254 (268)
92 1nir_A Nitrite reductase; hemo 99.4 1.3E-10 4.4E-15 114.1 29.8 233 45-314 179-442 (543)
93 3bws_A Protein LP49; two-domai 99.4 1.1E-10 3.9E-15 109.6 27.3 221 46-312 171-420 (433)
94 3c75_H MADH, methylamine dehyd 99.4 4E-11 1.4E-15 113.9 23.4 244 54-318 82-396 (426)
95 3scy_A Hypothetical bacterial 99.4 1.9E-10 6.4E-15 105.9 27.4 232 43-303 98-360 (361)
96 1pby_B Quinohemoprotein amine 99.4 3E-10 1E-14 102.4 27.9 225 46-310 35-297 (337)
97 1nir_A Nitrite reductase; hemo 99.4 2E-10 7E-15 112.7 28.7 231 51-314 144-391 (543)
98 2mad_H Methylamine dehydrogena 99.4 5.7E-10 1.9E-14 104.4 29.9 232 43-302 65-369 (373)
99 1l0q_A Surface layer protein; 99.4 7.9E-10 2.7E-14 102.4 29.7 209 57-312 3-219 (391)
100 3a9g_A Putative uncharacterize 99.4 6.6E-11 2.2E-15 110.0 22.2 209 46-268 74-330 (354)
101 2mad_H Methylamine dehydrogena 99.4 6.9E-10 2.4E-14 103.8 29.3 246 51-318 27-344 (373)
102 1mda_H Methylamine dehydrogena 99.4 4.3E-11 1.5E-15 111.7 20.9 228 43-303 64-365 (368)
103 3bws_A Protein LP49; two-domai 99.4 5.7E-10 1.9E-14 104.8 28.4 225 45-312 123-364 (433)
104 3sjl_D Methylamine dehydrogena 99.4 1.4E-10 4.8E-15 108.5 23.4 230 44-302 78-381 (386)
105 1jmx_B Amine dehydrogenase; ox 99.4 5.2E-10 1.8E-14 101.5 26.3 160 48-232 3-176 (349)
106 1cru_A Protein (soluble quinop 99.4 4.6E-11 1.6E-15 114.7 19.9 168 43-222 24-249 (454)
107 1qks_A Cytochrome CD1 nitrite 99.4 1.5E-09 5.1E-14 107.0 31.1 238 43-314 195-461 (567)
108 1jof_A Carboxy-CIS,CIS-muconat 99.3 4.6E-10 1.6E-14 104.0 23.6 248 46-315 41-332 (365)
109 1fwx_A Nitrous oxide reductase 99.3 2E-10 6.9E-15 112.2 21.1 255 55-330 100-428 (595)
110 2p9w_A MAL S 1 allergenic prot 99.3 2.6E-10 8.8E-15 103.8 20.4 203 98-312 14-253 (334)
111 3sre_A PON1, serum paraoxonase 99.3 3.6E-10 1.2E-14 104.7 21.0 193 98-312 51-285 (355)
112 1jmx_B Amine dehydrogenase; ox 99.3 1.1E-09 3.6E-14 99.4 24.0 209 46-279 44-326 (349)
113 2ece_A 462AA long hypothetical 99.3 7E-10 2.4E-14 105.0 23.1 209 46-267 139-399 (462)
114 3sjl_D Methylamine dehydrogena 99.3 1.8E-09 6E-14 101.1 25.0 246 51-318 39-357 (386)
115 2g8s_A Glucose/sorbosone dehyd 99.3 3.8E-10 1.3E-14 104.7 19.9 209 46-267 67-340 (353)
116 1qks_A Cytochrome CD1 nitrite 99.2 6.2E-09 2.1E-13 102.6 28.1 236 46-314 155-410 (567)
117 3hxj_A Pyrrolo-quinoline quino 99.2 4.4E-09 1.5E-13 95.0 25.2 213 50-315 103-316 (330)
118 1mda_H Methylamine dehydrogena 99.2 5.3E-10 1.8E-14 104.3 19.4 236 56-318 32-340 (368)
119 2oiz_A Aromatic amine dehydrog 99.2 1.1E-08 3.6E-13 95.0 28.0 111 57-179 17-139 (361)
120 1pby_B Quinohemoprotein amine 99.2 3.8E-09 1.3E-13 95.1 24.2 189 46-279 83-311 (337)
121 1jof_A Carboxy-CIS,CIS-muconat 99.2 4.3E-09 1.5E-13 97.4 24.9 207 46-269 84-330 (365)
122 3v9f_A Two-component system se 99.2 6.8E-09 2.3E-13 105.9 26.9 235 47-314 409-648 (781)
123 3das_A Putative oxidoreductase 99.2 2.7E-09 9.1E-14 98.5 21.0 156 148-312 30-220 (347)
124 1cru_A Protein (soluble quinop 99.2 1.6E-10 5.5E-15 110.9 12.5 157 98-269 28-247 (454)
125 1gxr_A ESG1, transducin-like e 99.0 9.3E-07 3.2E-11 79.1 31.3 221 45-309 98-322 (337)
126 4a2l_A BT_4663, two-component 99.0 6.7E-08 2.3E-12 98.7 26.4 235 48-314 409-651 (795)
127 4a2l_A BT_4663, two-component 99.0 7.3E-08 2.5E-12 98.5 25.9 236 47-313 359-605 (795)
128 3hxj_A Pyrrolo-quinoline quino 99.0 1.1E-07 3.6E-12 85.8 23.8 180 46-272 138-317 (330)
129 2wg3_C Hedgehog-interacting pr 99.0 1.5E-07 5.2E-12 90.3 25.8 264 43-312 11-354 (463)
130 3v9f_A Two-component system se 99.0 1E-07 3.6E-12 97.1 26.2 231 48-314 316-559 (781)
131 3ow8_A WD repeat-containing pr 99.0 2.9E-06 1E-10 76.9 32.8 223 46-311 82-308 (321)
132 1gxr_A ESG1, transducin-like e 99.0 3E-06 1E-10 75.7 31.4 208 39-279 46-256 (337)
133 1fwx_A Nitrous oxide reductase 99.0 2.2E-08 7.5E-13 97.8 18.2 207 44-267 133-406 (595)
134 3q6k_A 43.2 kDa salivary prote 99.0 1.5E-07 5E-12 87.6 23.0 206 46-269 88-343 (381)
135 3zwl_B Eukaryotic translation 98.9 3.4E-06 1.2E-10 76.3 31.1 217 35-279 23-250 (369)
136 1got_B GT-beta; complex (GTP-b 98.9 8.1E-06 2.8E-10 74.3 31.7 228 46-311 99-330 (340)
137 4ery_A WD repeat-containing pr 98.9 9.7E-06 3.3E-10 72.4 31.0 205 38-279 17-224 (312)
138 3ow8_A WD repeat-containing pr 98.8 5E-06 1.7E-10 75.3 27.9 184 46-267 124-308 (321)
139 4ery_A WD repeat-containing pr 98.8 3.2E-05 1.1E-09 69.0 32.3 227 46-311 67-297 (312)
140 2ymu_A WD-40 repeat protein; u 98.8 9.2E-06 3.1E-10 78.8 30.3 220 46-311 346-567 (577)
141 1k8k_C P40, ARP2/3 complex 41 98.8 6.8E-06 2.3E-10 74.7 27.4 232 46-311 10-262 (372)
142 2hqs_A Protein TOLB; TOLB, PAL 98.8 3.1E-06 1.1E-10 79.7 24.9 181 46-266 180-370 (415)
143 2ojh_A Uncharacterized protein 98.8 5.7E-06 1.9E-10 72.1 25.0 184 45-266 42-233 (297)
144 4h5i_A Guanine nucleotide-exch 98.8 1.1E-06 3.6E-11 81.4 20.8 201 46-278 135-343 (365)
145 3ott_A Two-component system se 98.7 2.3E-06 7.8E-11 86.9 24.9 233 47-314 375-618 (758)
146 2ymu_A WD-40 repeat protein; u 98.7 1.5E-05 5E-10 77.4 29.3 193 46-279 305-498 (577)
147 2aq5_A Coronin-1A; WD40 repeat 98.7 4.3E-06 1.5E-10 77.7 24.3 206 44-279 131-343 (402)
148 3ott_A Two-component system se 98.7 5E-06 1.7E-10 84.4 26.1 235 48-314 327-578 (758)
149 4gqb_B Methylosome protein 50; 98.7 3.5E-06 1.2E-10 77.4 22.5 186 46-267 129-318 (344)
150 3zwl_B Eukaryotic translation 98.7 3.5E-05 1.2E-09 69.5 28.8 194 44-267 74-277 (369)
151 1r5m_A SIR4-interacting protei 98.7 8.4E-06 2.9E-10 75.2 24.7 186 45-267 150-348 (425)
152 4g56_B MGC81050 protein; prote 98.7 1.4E-06 4.8E-11 80.2 19.1 205 46-279 44-259 (357)
153 3frx_A Guanine nucleotide-bind 98.7 6.3E-05 2.1E-09 67.8 29.4 183 46-268 67-256 (319)
154 3pe7_A Oligogalacturonate lyas 98.7 5.2E-06 1.8E-10 76.3 22.5 187 49-263 85-303 (388)
155 2pbi_B Guanine nucleotide-bind 98.7 8.8E-05 3E-09 67.9 30.6 231 46-311 108-344 (354)
156 1vyh_C Platelet-activating fac 98.7 3.3E-05 1.1E-09 72.3 28.3 162 40-232 104-266 (410)
157 3ei3_B DNA damage-binding prot 98.7 1.9E-05 6.6E-10 72.5 26.0 209 41-279 70-283 (383)
158 2aq5_A Coronin-1A; WD40 repeat 98.6 3.8E-05 1.3E-09 71.2 28.1 209 46-279 83-300 (402)
159 2pbi_B Guanine nucleotide-bind 98.6 2.4E-05 8.1E-10 71.8 26.3 188 46-268 156-345 (354)
160 4gqb_B Methylosome protein 50; 98.6 3.8E-05 1.3E-09 70.4 27.6 223 48-310 86-317 (344)
161 3mkq_A Coatomer beta'-subunit; 98.6 3.4E-05 1.2E-09 78.0 29.8 202 41-279 10-218 (814)
162 1got_B GT-beta; complex (GTP-b 98.6 0.00014 4.7E-09 66.0 31.1 204 39-279 50-258 (340)
163 2ynn_A Coatomer subunit beta'; 98.6 0.00013 4.3E-09 65.2 30.2 161 41-232 10-173 (304)
164 2ojh_A Uncharacterized protein 98.6 8.7E-06 3E-10 70.9 22.1 163 64-267 20-191 (297)
165 4aez_A CDC20, WD repeat-contai 98.6 0.00011 3.9E-09 68.1 30.7 180 46-266 136-320 (401)
166 2hqs_A Protein TOLB; TOLB, PAL 98.6 3.4E-05 1.2E-09 72.5 26.8 161 66-266 159-327 (415)
167 2z3z_A Dipeptidyl aminopeptida 98.6 9E-06 3.1E-10 81.3 23.8 191 47-266 183-417 (706)
168 3iz6_a 40S ribosomal protein R 98.6 0.00021 7.2E-09 65.9 31.4 246 40-311 62-362 (380)
169 2ecf_A Dipeptidyl peptidase IV 98.6 5.7E-06 1.9E-10 83.2 22.1 191 46-265 38-301 (741)
170 1erj_A Transcriptional repress 98.6 0.00011 3.7E-09 68.2 29.4 207 47-279 126-342 (393)
171 3amr_A 3-phytase; beta-propell 98.6 2E-05 6.7E-10 72.3 23.3 139 97-258 128-291 (355)
172 1vyh_C Platelet-activating fac 98.6 5.9E-05 2E-09 70.6 27.2 222 46-310 152-397 (410)
173 2ynn_A Coatomer subunit beta'; 98.6 0.00015 5.1E-09 64.7 28.4 222 46-309 57-287 (304)
174 4g56_B MGC81050 protein; prote 98.6 4.3E-06 1.5E-10 76.9 18.5 186 46-267 141-330 (357)
175 1nr0_A Actin interacting prote 98.5 3.6E-05 1.2E-09 76.0 26.0 227 46-310 20-256 (611)
176 4h5i_A Guanine nucleotide-exch 98.5 4.4E-05 1.5E-09 70.4 24.9 191 99-316 136-335 (365)
177 1r5m_A SIR4-interacting protei 98.5 6.5E-05 2.2E-09 69.1 26.1 199 46-279 110-320 (425)
178 1k8k_C P40, ARP2/3 complex 41 98.5 3E-05 1E-09 70.4 23.5 192 44-268 52-263 (372)
179 3fm0_A Protein CIAO1; WDR39,SG 98.5 2.1E-05 7.3E-10 71.7 22.1 190 47-267 19-212 (345)
180 3amr_A 3-phytase; beta-propell 98.5 1.6E-05 5.5E-10 72.9 20.9 181 122-318 48-257 (355)
181 3jrp_A Fusion protein of prote 98.5 0.00012 4.2E-09 66.2 26.8 191 46-267 13-227 (379)
182 4e54_B DNA damage-binding prot 98.5 1E-05 3.4E-10 76.3 20.0 204 46-279 121-328 (435)
183 2vdu_B TRNA (guanine-N(7)-)-me 98.5 4.5E-05 1.5E-09 72.1 24.2 230 46-310 104-370 (450)
184 3vl1_A 26S proteasome regulato 98.5 9.2E-05 3.1E-09 68.5 25.6 192 46-268 141-353 (420)
185 3mkq_A Coatomer beta'-subunit; 98.5 0.0001 3.6E-09 74.4 28.0 199 43-279 54-260 (814)
186 1pgu_A Actin interacting prote 98.5 7.5E-05 2.6E-09 72.6 26.0 196 46-279 20-239 (615)
187 3sfz_A APAF-1, apoptotic pepti 98.5 0.00027 9.3E-09 75.1 32.2 231 46-309 659-898 (1249)
188 4a9v_A PHOX; hydrolase, beta-p 98.5 2.5E-06 8.5E-11 82.7 14.6 116 98-222 385-553 (592)
189 2z3z_A Dipeptidyl aminopeptida 98.5 3.5E-05 1.2E-09 77.0 23.8 190 47-267 28-276 (706)
190 3frx_A Guanine nucleotide-bind 98.5 0.00054 1.8E-08 61.5 29.6 205 41-279 14-228 (319)
191 2xzm_R RACK1; ribosome, transl 98.5 0.00031 1.1E-08 63.7 28.0 197 46-278 78-285 (343)
192 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00012 4.1E-09 67.3 25.4 192 55-279 103-297 (376)
193 3sfz_A APAF-1, apoptotic pepti 98.4 0.00017 5.7E-09 76.7 29.7 207 38-279 609-829 (1249)
194 3dwl_C Actin-related protein 2 98.4 1.2E-05 4.1E-10 73.5 18.3 237 46-310 13-268 (377)
195 3dm0_A Maltose-binding peripla 98.4 0.0003 1E-08 70.3 29.4 198 46-279 432-633 (694)
196 3vl1_A 26S proteasome regulato 98.4 0.00029 9.9E-09 65.1 27.5 203 50-279 103-323 (420)
197 3dm0_A Maltose-binding peripla 98.4 0.00075 2.6E-08 67.4 31.7 211 40-279 378-593 (694)
198 1sq9_A Antiviral protein SKI8; 98.4 0.00012 4E-09 67.2 23.9 224 38-279 56-323 (397)
199 2pm9_A Protein WEB1, protein t 98.4 2.3E-05 7.9E-10 72.4 19.0 211 47-279 70-295 (416)
200 4aez_A CDC20, WD repeat-contai 98.4 0.00061 2.1E-08 63.1 28.9 196 46-279 178-381 (401)
201 3o4h_A Acylamino-acid-releasin 98.4 1.9E-05 6.5E-10 77.2 19.3 174 46-267 66-263 (582)
202 3odt_A Protein DOA1; ubiquitin 98.4 0.001 3.4E-08 58.4 29.9 219 46-309 61-282 (313)
203 3pe7_A Oligogalacturonate lyas 98.4 7.7E-05 2.6E-09 68.4 21.8 182 48-265 39-254 (388)
204 2vdu_B TRNA (guanine-N(7)-)-me 98.4 0.00021 7.1E-09 67.4 25.2 160 98-279 104-272 (450)
205 3s25_A Hypothetical 7-bladed b 98.4 8.1E-05 2.8E-09 67.2 21.3 182 48-279 18-216 (302)
206 2pm9_A Protein WEB1, protein t 98.3 7.6E-05 2.6E-09 68.8 21.5 201 46-268 115-325 (416)
207 2ecf_A Dipeptidyl peptidase IV 98.3 7.5E-05 2.6E-09 74.9 23.0 189 47-266 211-441 (741)
208 3ei3_B DNA damage-binding prot 98.3 0.00044 1.5E-08 63.2 26.5 157 46-233 120-284 (383)
209 2xyi_A Probable histone-bindin 98.3 0.00015 5.2E-09 68.1 23.0 206 38-268 175-398 (430)
210 1xfd_A DIP, dipeptidyl aminope 98.3 8.8E-05 3E-09 74.1 22.5 160 46-219 18-192 (723)
211 4a11_B DNA excision repair pro 98.3 0.00035 1.2E-08 63.8 24.9 198 45-267 44-263 (408)
212 3iz6_a 40S ribosomal protein R 98.3 0.00045 1.5E-08 63.7 25.6 199 47-268 160-363 (380)
213 1sq9_A Antiviral protein SKI8; 98.3 0.00021 7E-09 65.5 22.6 204 46-261 123-366 (397)
214 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.00074 2.5E-08 61.9 26.2 221 49-312 48-285 (376)
215 2ad6_A Methanol dehydrogenase 98.3 0.0015 5.3E-08 64.0 29.5 202 101-315 239-528 (571)
216 1erj_A Transcriptional repress 98.2 0.0014 4.8E-08 60.6 27.7 200 46-268 167-377 (393)
217 3dwl_C Actin-related protein 2 98.2 2.7E-05 9.3E-10 71.1 15.6 203 46-275 57-277 (377)
218 3k26_A Polycomb protein EED; W 98.2 0.00053 1.8E-08 61.6 23.8 116 47-179 72-191 (366)
219 3azo_A Aminopeptidase; POP fam 98.2 0.0003 1E-08 69.6 23.8 198 46-267 131-354 (662)
220 1nr0_A Actin interacting prote 98.2 0.0021 7.2E-08 63.2 29.7 162 46-232 105-271 (611)
221 2xzm_R RACK1; ribosome, transl 98.2 0.0024 8.2E-08 57.7 27.7 198 41-267 18-231 (343)
222 1pgu_A Actin interacting prote 98.2 0.0012 4.2E-08 63.9 27.4 212 39-279 58-284 (615)
223 3s25_A Hypothetical 7-bladed b 98.2 0.0002 6.7E-09 64.7 19.9 189 66-313 88-282 (302)
224 2wg3_C Hedgehog-interacting pr 98.2 0.00054 1.8E-08 65.5 23.6 213 46-268 70-354 (463)
225 1yfq_A Cell cycle arrest prote 98.2 0.00045 1.6E-08 61.7 21.6 232 46-315 58-315 (342)
226 3azo_A Aminopeptidase; POP fam 98.2 0.00059 2E-08 67.5 24.3 191 50-267 82-311 (662)
227 4aow_A Guanine nucleotide-bind 98.1 0.0038 1.3E-07 55.4 31.7 209 40-279 34-247 (340)
228 2xyi_A Probable histone-bindin 98.1 0.0013 4.5E-08 61.6 25.2 189 46-267 130-340 (430)
229 3mmy_A MRNA export factor; mRN 98.1 0.00046 1.6E-08 62.0 21.2 118 42-179 37-159 (368)
230 2pm7_B Protein transport prote 98.1 0.0037 1.3E-07 55.3 26.7 193 46-267 11-225 (297)
231 2oaj_A Protein SNI1; WD40 repe 98.1 0.0019 6.6E-08 66.8 28.1 202 44-279 17-243 (902)
232 3i2n_A WD repeat-containing pr 98.1 0.00016 5.6E-09 64.9 17.8 192 51-265 124-337 (357)
233 3dw8_B Serine/threonine-protei 98.1 0.0011 3.8E-08 61.6 23.9 175 45-232 178-374 (447)
234 1xfd_A DIP, dipeptidyl aminope 98.1 0.0005 1.7E-08 68.6 22.7 153 98-267 256-427 (723)
235 3jro_A Fusion protein of prote 98.1 0.00041 1.4E-08 70.3 22.1 191 46-267 11-225 (753)
236 3i2n_A WD repeat-containing pr 98.1 0.0011 3.8E-08 59.3 22.9 193 41-267 15-230 (357)
237 3jrp_A Fusion protein of prote 98.1 0.00026 8.8E-09 64.0 18.6 196 46-267 57-274 (379)
238 4a9v_A PHOX; hydrolase, beta-p 98.1 3.3E-05 1.1E-09 74.9 12.7 112 150-267 384-549 (592)
239 3lrv_A PRE-mRNA-splicing facto 98.1 0.005 1.7E-07 55.5 26.6 144 98-266 127-277 (343)
240 1kb0_A Quinohemoprotein alcoho 98.0 0.0062 2.1E-07 61.0 29.5 204 100-314 246-540 (677)
241 1w6s_A Methanol dehydrogenase 98.0 0.0051 1.7E-07 60.7 28.1 203 101-314 245-536 (599)
242 4aow_A Guanine nucleotide-bind 98.0 0.0064 2.2E-07 53.9 29.2 196 46-279 88-287 (340)
243 1k32_A Tricorn protease; prote 98.0 0.00056 1.9E-08 71.8 22.1 207 45-279 379-638 (1045)
244 3dw8_B Serine/threonine-protei 98.0 0.0021 7.2E-08 59.6 24.0 211 46-268 30-304 (447)
245 3odt_A Protein DOA1; ubiquitin 98.0 0.0054 1.8E-07 53.6 24.8 199 40-279 14-215 (313)
246 3f3f_A Nucleoporin SEH1; struc 98.0 0.008 2.7E-07 52.9 31.0 199 46-267 13-236 (351)
247 3k26_A Polycomb protein EED; W 98.0 0.0091 3.1E-07 53.3 27.0 166 45-232 19-193 (366)
248 3gre_A Serine/threonine-protei 97.9 0.0026 8.9E-08 59.1 23.2 206 45-279 64-293 (437)
249 3fm0_A Protein CIAO1; WDR39,SG 97.9 0.0018 6.2E-08 58.7 21.6 147 98-267 18-168 (345)
250 1yiq_A Quinohemoprotein alcoho 97.9 0.0085 2.9E-07 60.1 28.2 200 101-314 239-538 (689)
251 3c5m_A Oligogalacturonate lyas 97.9 0.00046 1.6E-08 63.0 17.2 184 46-266 37-255 (396)
252 3v7d_B Cell division control p 97.9 0.011 3.8E-07 55.2 27.3 200 49-279 127-342 (464)
253 1yfq_A Cell cycle arrest prote 97.9 0.0011 3.7E-08 59.1 19.3 190 46-267 13-212 (342)
254 3lrv_A PRE-mRNA-splicing facto 97.9 0.0034 1.2E-07 56.6 22.7 195 54-279 46-245 (343)
255 3c5m_A Oligogalacturonate lyas 97.9 0.00046 1.6E-08 63.0 16.8 182 49-266 85-299 (396)
256 2ad6_A Methanol dehydrogenase 97.9 0.015 5E-07 57.0 28.0 116 50-183 58-189 (571)
257 4a11_B DNA excision repair pro 97.9 0.0045 1.5E-07 56.3 22.8 166 46-232 101-277 (408)
258 1tl2_A L10, protein (tachylect 97.9 0.00031 1.1E-08 60.1 13.4 158 46-231 42-210 (236)
259 1kb0_A Quinohemoprotein alcoho 97.8 0.014 4.9E-07 58.3 28.0 160 55-232 77-293 (677)
260 1flg_A Protein (quinoprotein e 97.8 0.028 9.5E-07 55.2 30.6 203 101-314 250-549 (582)
261 1kv9_A Type II quinohemoprotei 97.8 0.0085 2.9E-07 59.9 25.4 201 101-314 234-521 (668)
262 2xdw_A Prolyl endopeptidase; a 97.8 0.0093 3.2E-07 59.7 25.5 192 47-267 127-353 (710)
263 3o4h_A Acylamino-acid-releasin 97.7 0.00069 2.3E-08 66.1 15.7 182 49-267 114-299 (582)
264 4gga_A P55CDC, cell division c 97.7 0.031 1E-06 51.8 26.3 224 45-309 148-380 (420)
265 3v7d_B Cell division control p 97.7 0.033 1.1E-06 52.0 30.4 229 46-311 205-450 (464)
266 4e54_B DNA damage-binding prot 97.7 0.0013 4.4E-08 61.7 16.5 147 98-267 121-269 (435)
267 2hes_X YDR267CP; beta-propelle 97.7 0.027 9.2E-07 50.4 26.7 202 46-269 60-270 (330)
268 3jro_A Fusion protein of prote 97.7 0.0019 6.6E-08 65.3 18.6 196 46-267 55-272 (753)
269 2j04_A TAU60, YPL007P, hypothe 97.7 0.002 6.7E-08 63.0 17.6 200 36-279 5-212 (588)
270 1k32_A Tricorn protease; prote 97.7 0.0015 5.3E-08 68.4 18.3 180 46-268 297-491 (1045)
271 3gre_A Serine/threonine-protei 97.6 0.01 3.4E-07 55.1 21.7 162 52-232 178-360 (437)
272 4a5s_A Dipeptidyl peptidase 4 97.6 0.003 1E-07 63.6 19.0 153 48-218 20-189 (740)
273 1tl2_A L10, protein (tachylect 97.6 0.00042 1.5E-08 59.2 10.4 110 150-269 41-154 (236)
274 3vu4_A KMHSV2; beta-propeller 97.6 0.016 5.5E-07 52.6 22.0 62 201-267 196-258 (355)
275 1kv9_A Type II quinohemoprotei 97.6 0.051 1.7E-06 54.2 27.3 111 55-183 66-191 (668)
276 1z68_A Fibroblast activation p 97.6 0.0021 7E-08 64.2 17.0 156 47-219 18-188 (719)
277 3bg1_A Protein SEC13 homolog; 97.6 0.0067 2.3E-07 54.1 18.8 118 46-179 15-135 (316)
278 1yiq_A Quinohemoprotein alcoho 97.5 0.02 6.9E-07 57.3 23.7 80 171-267 455-535 (689)
279 2gop_A Trilobed protease; beta 97.5 0.041 1.4E-06 49.0 23.3 147 47-228 61-250 (347)
280 2bkl_A Prolyl endopeptidase; m 97.5 0.021 7.3E-07 56.9 23.3 158 54-232 77-262 (695)
281 3f3f_A Nucleoporin SEH1; struc 97.5 0.044 1.5E-06 48.0 23.7 128 44-179 110-248 (351)
282 1flg_A Protein (quinoprotein e 97.5 0.048 1.6E-06 53.5 24.9 81 170-267 465-546 (582)
283 4gga_A P55CDC, cell division c 97.4 0.073 2.5E-06 49.2 27.6 155 45-232 106-262 (420)
284 2j04_A TAU60, YPL007P, hypothe 97.4 0.036 1.2E-06 54.1 22.8 186 46-268 87-286 (588)
285 2pm7_B Protein transport prote 97.4 0.029 9.9E-07 49.4 20.6 196 47-267 56-272 (297)
286 3zwu_A Alkaline phosphatase PH 97.4 0.0027 9.2E-08 62.3 14.3 115 98-221 385-552 (592)
287 2xdw_A Prolyl endopeptidase; a 97.4 0.093 3.2E-06 52.3 26.1 155 54-231 81-268 (710)
288 1w6s_A Methanol dehydrogenase 97.3 0.09 3.1E-06 51.7 25.0 51 210-267 483-533 (599)
289 3zwu_A Alkaline phosphatase PH 97.3 0.0026 9E-08 62.4 13.2 111 150-266 384-548 (592)
290 2bkl_A Prolyl endopeptidase; m 97.2 0.078 2.7E-06 52.8 23.9 192 47-267 123-336 (695)
291 2ovr_B FBW7, F-BOX/WD repeat p 97.2 0.15 5.3E-06 47.2 26.4 182 52-279 125-309 (445)
292 4gq1_A NUP37; propeller, trans 97.2 0.078 2.7E-06 48.7 21.3 201 46-268 138-378 (393)
293 3bg1_A Protein SEC13 homolog; 97.0 0.087 3E-06 46.7 19.8 195 46-267 59-280 (316)
294 2hes_X YDR267CP; beta-propelle 97.0 0.16 5.5E-06 45.2 30.9 195 41-267 11-217 (330)
295 2oit_A Nucleoporin 214KDA; NH2 97.0 0.014 4.7E-07 55.0 14.7 169 46-231 94-278 (434)
296 3mmy_A MRNA export factor; mRN 97.0 0.17 5.7E-06 44.8 22.8 115 98-232 41-161 (368)
297 2w18_A PALB2, fancn, partner a 97.0 0.17 5.7E-06 46.3 21.2 159 50-228 184-354 (356)
298 1yr2_A Prolyl oligopeptidase; 97.0 0.26 8.8E-06 49.4 24.8 188 47-267 165-380 (741)
299 3vu4_A KMHSV2; beta-propeller 97.0 0.2 6.7E-06 45.3 25.0 75 150-232 196-272 (355)
300 2oaj_A Protein SNI1; WD40 repe 97.0 0.059 2E-06 55.7 20.2 167 46-232 60-243 (902)
301 2j04_B YDR362CP, TAU91; beta p 97.0 0.084 2.9E-06 51.0 20.2 190 47-267 210-415 (524)
302 2ovr_B FBW7, F-BOX/WD repeat p 96.8 0.3 1E-05 45.2 28.4 218 47-309 202-423 (445)
303 4ggc_A P55CDC, cell division c 96.8 0.23 7.8E-06 43.1 21.9 162 44-230 150-314 (318)
304 4ggc_A P55CDC, cell division c 96.7 0.26 9E-06 42.7 26.3 197 42-267 65-302 (318)
305 1yr2_A Prolyl oligopeptidase; 96.7 0.63 2.2E-05 46.5 27.5 158 53-232 115-304 (741)
306 2oit_A Nucleoporin 214KDA; NH2 96.6 0.088 3E-06 49.4 17.0 146 98-266 94-257 (434)
307 1p22_A F-BOX/WD-repeat protein 96.6 0.43 1.5E-05 44.1 22.1 169 55-267 182-352 (435)
308 1p22_A F-BOX/WD-repeat protein 96.5 0.51 1.7E-05 43.6 26.0 183 51-279 138-326 (435)
309 1z68_A Fibroblast activation p 96.5 0.019 6.6E-07 57.1 12.0 112 100-232 19-140 (719)
310 2gop_A Trilobed protease; beta 96.4 0.047 1.6E-06 48.6 13.2 113 123-267 42-187 (347)
311 4a5s_A Dipeptidyl peptidase 4 96.4 0.067 2.3E-06 53.7 15.6 114 99-232 19-142 (740)
312 2j04_B YDR362CP, TAU91; beta p 96.3 0.05 1.7E-06 52.6 13.6 157 46-232 268-429 (524)
313 2w18_A PALB2, fancn, partner a 95.8 1.1 3.7E-05 40.9 21.1 139 109-268 193-345 (356)
314 1k3i_A Galactose oxidase precu 95.7 1.2 3.9E-05 44.0 20.7 78 49-137 247-327 (656)
315 2xbg_A YCF48-like protein; pho 95.6 1.1 3.8E-05 39.9 22.1 187 48-270 125-313 (327)
316 3sbq_A Nitrous-oxide reductase 95.6 1.2 4.3E-05 43.1 19.0 195 55-268 141-396 (638)
317 3iuj_A Prolyl endopeptidase; h 95.5 0.74 2.5E-05 45.7 18.2 156 48-232 237-406 (693)
318 1k3i_A Galactose oxidase precu 95.4 1.8 6.3E-05 42.6 20.6 120 46-181 187-324 (656)
319 2xbg_A YCF48-like protein; pho 95.3 1.5 5.2E-05 39.0 25.3 189 46-271 37-226 (327)
320 3iuj_A Prolyl endopeptidase; h 95.1 2.8 9.7E-05 41.5 21.2 120 98-232 130-269 (693)
321 2hz6_A Endoplasmic reticulum t 95.1 0.014 4.8E-07 53.6 3.9 141 56-233 9-151 (369)
322 2hz6_A Endoplasmic reticulum t 94.6 0.021 7E-07 52.5 3.7 107 102-232 5-112 (369)
323 4gq1_A NUP37; propeller, trans 94.2 3.1 0.00011 37.7 23.0 155 59-232 104-287 (393)
324 3sbq_A Nitrous-oxide reductase 93.3 0.12 4.1E-06 50.0 6.2 136 125-268 299-453 (638)
325 3ii7_A Kelch-like protein 7; p 93.2 3.9 0.00014 35.5 28.0 219 56-312 12-255 (306)
326 3b7f_A Glycosyl hydrolase, BNR 92.8 5.5 0.00019 36.2 20.0 168 45-230 55-261 (394)
327 1zgk_A Kelch-like ECH-associat 92.5 5.1 0.00017 34.9 22.7 220 55-311 24-269 (308)
328 2be1_A Serine/threonine-protei 92.4 2 6.8E-05 38.9 12.8 109 109-232 11-131 (339)
329 2xe4_A Oligopeptidase B; hydro 92.2 4.4 0.00015 40.6 16.5 117 47-180 176-304 (751)
330 2vpj_A Kelch-like protein 12; 90.5 7.9 0.00027 33.3 26.4 169 66-267 31-213 (301)
331 3b7f_A Glycosyl hydrolase, BNR 89.3 12 0.00041 33.8 17.4 110 104-228 19-144 (394)
332 4asc_A Kelch repeat and BTB do 88.4 12 0.00041 32.5 26.1 170 66-267 13-203 (315)
333 2uvk_A YJHT; unknown function, 87.9 14 0.00047 32.7 25.7 99 55-167 19-125 (357)
334 2xzh_A Clathrin heavy chain 1; 86.7 15 0.00053 33.1 13.5 71 92-184 255-327 (365)
335 2xe4_A Oligopeptidase B; hydro 85.8 30 0.001 34.5 24.5 117 98-232 175-305 (751)
336 2xn4_A Kelch-like protein 2; s 85.4 17 0.00058 31.2 25.5 208 66-311 30-258 (302)
337 2vpj_A Kelch-like protein 12; 83.7 20 0.00068 30.7 23.9 180 55-267 62-260 (301)
338 2woz_A Kelch repeat and BTB do 83.6 21 0.00072 30.9 22.6 155 52-232 53-232 (318)
339 1bpo_A Protein (clathrin); cla 83.1 31 0.0011 32.5 14.9 71 92-184 254-326 (494)
340 2be1_A Serine/threonine-protei 82.7 27 0.00091 31.4 15.4 74 55-143 55-140 (339)
341 2zwa_A Leucine carboxyl methyl 81.3 44 0.0015 33.0 22.0 201 49-267 391-614 (695)
342 3hx6_A Type 4 fimbrial biogene 81.0 8.2 0.00028 37.3 9.9 56 122-181 221-285 (570)
343 3s9j_A Member of DUF4221 famil 76.2 13 0.00043 34.0 9.2 61 125-185 53-115 (369)
344 1zgk_A Kelch-like ECH-associat 76.1 37 0.0013 29.2 20.4 136 109-267 25-175 (308)
345 2zwa_A Leucine carboxyl methyl 75.7 65 0.0022 31.8 21.1 145 109-267 398-557 (695)
346 4asc_A Kelch repeat and BTB do 75.6 39 0.0013 29.1 20.6 181 53-267 43-250 (315)
347 1xip_A Nucleoporin NUP159; bet 72.7 57 0.0019 29.8 15.6 139 98-279 39-191 (388)
348 3ii7_A Kelch-like protein 7; p 72.6 44 0.0015 28.5 23.0 134 109-267 12-156 (306)
349 3a0f_A Xyloglucanase; beta-pro 71.2 87 0.003 31.2 26.0 170 46-232 22-213 (763)
350 2woz_A Kelch repeat and BTB do 67.3 60 0.0021 27.9 23.6 170 66-267 24-213 (318)
351 2uvk_A YJHT; unknown function, 65.1 70 0.0024 27.9 20.2 51 124-178 168-224 (357)
352 3elq_A Arylsulfate sulfotransf 63.7 1.1E+02 0.0037 29.6 15.2 103 125-232 227-385 (571)
353 2cn3_A Xyloglucanase, beta-1,4 54.3 1.7E+02 0.0058 28.9 18.1 124 98-232 24-164 (737)
354 2cn3_A Xyloglucanase, beta-1,4 53.1 1.8E+02 0.0061 28.7 27.5 207 46-267 24-261 (737)
355 2xn4_A Kelch-like protein 2; s 51.3 1.1E+02 0.0038 25.8 25.2 180 55-267 61-258 (302)
356 1xi4_A Clathrin heavy chain; a 46.2 1.5E+02 0.0052 32.3 11.6 45 92-142 254-298 (1630)
357 1xip_A Nucleoporin NUP159; bet 40.5 2.1E+02 0.0072 25.9 18.7 135 47-217 90-230 (388)
358 3elq_A Arylsulfate sulfotransf 39.7 2.6E+02 0.009 26.8 15.0 80 101-181 437-541 (571)
359 3hsh_A Endostatin, collagen al 29.2 81 0.0028 20.2 4.0 32 259-290 22-53 (56)
360 4ftd_A Uncharacterized protein 24.7 4.2E+02 0.014 24.6 10.5 80 99-179 191-277 (453)
361 2zux_A YESW protein; beta-prop 21.3 5.6E+02 0.019 24.7 10.5 18 125-142 293-310 (591)
362 3hx6_A Type 4 fimbrial biogene 20.1 5.8E+02 0.02 24.5 13.5 54 170-232 222-285 (570)
No 1
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.96 E-value=3.7e-27 Score=214.74 Aligned_cols=266 Identities=18% Similarity=0.203 Sum_probs=191.0
Q ss_pred CCceeEEEecCCccccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcC--C---CccceEEE--
Q 020019 33 PATHVYHYHSSSFFRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELT--G---NGSLGLVL-- 104 (332)
Q Consensus 33 ~~~~~i~~~~~~~~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~gi~v-- 104 (332)
++++.|.++..+.|||++.||+. |++|++++.+++|+++++.++.. .+ + ..++.. + ..+.||.+
T Consensus 1 ~~~~~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~----~~---~-~~~~~s~~g~~~~~~sGl~~~~ 72 (334)
T 2p9w_A 1 ALPDQIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH----FN---V-VIDGASSNGDGEQQMSGLSLLT 72 (334)
T ss_dssp CCCSEEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCE----EE---E-CCTTTCCSSCCSEEEEEEEESS
T ss_pred CCCceEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeE----EE---E-ecCCccccCCCcceeeEEEEec
Confidence 36789999999999999999884 66666778999999999975541 12 2 223322 2 25789999
Q ss_pred -eCCCCeEEEEEeCcC-----C---CccceEEEEECC---CCcEEEEEecCCCCC--------CCCCccceEECCCCcEE
Q 020019 105 -DHPRNRLLVVAADVF-----G---NKYSAVAAYDLS---TWNRLFLTQLSGPSD--------GKSCADDVTVDAEGNAY 164 (332)
Q Consensus 105 -d~~~g~l~v~~~~~~-----~---~~~~~l~~~d~~---~g~~~~~~~l~~~~~--------~~~~~ndiavd~dG~ly 164 (332)
|++ |+|||+..... . .+...|.+||++ +++..+...|+...+ ....+||+++|++||+|
T Consensus 73 ~D~~-grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaY 151 (334)
T 2p9w_A 73 HDNS-KRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSY 151 (334)
T ss_dssp SSSC-CEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEE
T ss_pred cCCC-CcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEE
Confidence 786 99999643110 0 235679999999 888888888742111 12469999999999999
Q ss_pred EEeCCC-CeEEEEcCCCceEE-EecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEE
Q 020019 165 VTDVTG-SKIWKVGVKGEFLS-IISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKL 241 (332)
Q Consensus 165 vtd~~~-~~I~~v~~~g~~~~-~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~ 241 (332)
|+++.. +.|+|++++|+... +...... .....++|||+++||| .|++++. .++|++||+... ....
T Consensus 152 Vt~s~~~~~I~rV~pdG~~~~~~~~~~~~-----~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~p-----v~~~ 220 (334)
T 2p9w_A 152 VAFALGMPAIARVSADGKTVSTFAWESGN-----GGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKP-----YAWP 220 (334)
T ss_dssp EEEEESSCEEEEECTTSCCEEEEEECCCC-----SSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSS-----SCCC
T ss_pred EeCCCCCCeEEEEeCCCCEEeeeeecCCC-----cccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCC-----ccee
Confidence 999999 99999999998443 3322111 1245789999999999 8888888 999999999843 1112
Q ss_pred EEec--C--CCCCCCCeE-EEeCCCeE-EEEeC-CceEEEEcCCCceEEEEEeeecCC-CcccceEEEE----ECCeEEE
Q 020019 242 IRVA--G--GPLSFGDGL-ELLSPTKL-VVAGN-PSARLVESSDGWETAAVVAKFSGP-VHRLATAATV----KDGRVYL 309 (332)
Q Consensus 242 v~~~--g--~~~~~pdGi-~~~~dG~l-~va~~-~~~~~v~~~dg~~~~~~~~~~~~~-~~~~pt~va~----~~g~lyv 309 (332)
+... | ..+..|||| ....+|++ +|+++ ...+++++.|+|+++.+...++.+ ..+.++..+. .++++|+
T Consensus 221 v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~DgW~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYv 300 (334)
T 2p9w_A 221 EPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDNWKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYA 300 (334)
T ss_dssp EECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSSTTSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEE
T ss_pred ecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCCcceeEEeeeecCccccCceeEEEEeccccCCeEEE
Confidence 3332 2 245789996 55667887 77764 345678899999999999877643 1345555555 6799997
Q ss_pred -EEecCcccc
Q 020019 310 -NHMLGFGYP 318 (332)
Q Consensus 310 -~~~~g~~~~ 318 (332)
..+++..++
T Consensus 301 v~~~f~~~~~ 310 (334)
T 2p9w_A 301 VSAFFDNGAH 310 (334)
T ss_dssp EECCGGGTTT
T ss_pred EeeecCCccc
Confidence 777776554
No 2
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.94 E-value=1.4e-24 Score=197.24 Aligned_cols=250 Identities=12% Similarity=0.122 Sum_probs=176.2
Q ss_pred ecCCccccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 41 HSSSFFRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 41 ~~~~~~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
.....++||++|+++ +++|+++...++|+++++.+++. .....+ ..+.+++++++ |++|++..
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~--------~~~~~~----~~~~~i~~~~d-G~l~v~~~--- 72 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV--------QRVTMD----APVSSVALRQS-GGYVATIG--- 72 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--------EEEECS----SCEEEEEEBTT-SSEEEEET---
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE--------EEEeCC----CceEEEEECCC-CCEEEEEC---
Confidence 334459999999995 56778888889999999986652 122222 26889999996 88999863
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC-----------CCCeEEEEcCCCceEEEecC
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV-----------TGSKIWKVGVKGEFLSIISS 188 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~-----------~~~~I~~v~~~g~~~~~~~~ 188 (332)
..|++||+++++......... ......+|++++|++|++|+++. ..+.||+++++|+...+..
T Consensus 73 ----~~l~~~d~~~g~~~~~~~~~~-~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~- 146 (297)
T 3g4e_A 73 ----TKFCALNWKEQSAVVLATVDN-DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD- 146 (297)
T ss_dssp ----TEEEEEETTTTEEEEEEECCT-TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE-
T ss_pred ----CeEEEEECCCCcEEEEEecCC-CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee-
Confidence 368999999888765554421 11235799999999999999874 3468999999987655432
Q ss_pred CCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCC--CCCCccceeEEE-EecCCCCCCCCeEEEeCCCeEE
Q 020019 189 PLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIV--DGVGEGEEIKLI-RVAGGPLSFGDGLELLSPTKLV 264 (332)
Q Consensus 189 ~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~--~~~~~~~~~~~v-~~~g~~~~~pdGi~~~~dG~l~ 264 (332)
....||||++++|| .||++++.+++|++++.+ ++... ..+.+ ... .....|+||++|++|+||
T Consensus 147 ----------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~--~~~~~~~~~-~~~~~p~g~~~d~~G~lw 213 (297)
T 3g4e_A 147 ----------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQIS--NRRSVYKLE-KEEQIPDGMCIDAEGKLW 213 (297)
T ss_dssp ----------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEE--EEEEEEECC-GGGCEEEEEEEBTTSCEE
T ss_pred ----------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCccc--CcEEEEECC-CCCCCCCeeEECCCCCEE
Confidence 23458999999999 899999999999999874 44220 11112 222 123579999999999999
Q ss_pred EEeCCce-EEEEcCC-CceEEEEEeeecCCCcccceEEEEE---CCeEEEEEe-cCcccc-CCccceeeeeec
Q 020019 265 VAGNPSA-RLVESSD-GWETAAVVAKFSGPVHRLATAATVK---DGRVYLNHM-LGFGYP-KKKHALVEAVFS 330 (332)
Q Consensus 265 va~~~~~-~~v~~~d-g~~~~~~~~~~~~~~~~~pt~va~~---~g~lyv~~~-~g~~~~-~~~~~~~~~~~~ 330 (332)
++..... ..++.++ | ++...+..+ ...|++++|. .++|||++. .+.+-. .+++|.+|++|.
T Consensus 214 va~~~~~~v~~~d~~tG----~~~~~i~~p-~~~~t~~~f~g~d~~~L~vt~~~~~~~~~~~~~~p~~G~~f~ 281 (297)
T 3g4e_A 214 VACYNGGRVIRLDPVTG----KRLQTVKLP-VDKTTSCCFGGKNYSEMYVTCARDGMDPEGLLRQPEAGGIFK 281 (297)
T ss_dssp EEEETTTEEEEECTTTC----CEEEEEECS-SSBEEEEEEESGGGCEEEEEEBCTTCCHHHHHHCTTTTCEEE
T ss_pred EEEcCCCEEEEEcCCCc----eEEEEEECC-CCCceEEEEeCCCCCEEEEEcCCcCCChhHccCCCCCceEEE
Confidence 9985432 3345554 7 344444444 3568999994 379999554 444322 456788999985
No 3
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.93 E-value=1.9e-23 Score=190.71 Aligned_cols=257 Identities=16% Similarity=0.091 Sum_probs=177.4
Q ss_pred CCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 43 SSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
.+.+||+++++++|++|+++...++|++++++++. . .+...+ ..|.||+++++ |+|||++....
T Consensus 30 ~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~------~--~~~~~~----~~p~gia~~~d-G~l~vad~~~~--- 93 (306)
T 2p4o_A 30 VNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ------Q--IHATVE----GKVSGLAFTSN-GDLVATGWNAD--- 93 (306)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE------E--EEEECS----SEEEEEEECTT-SCEEEEEECTT---
T ss_pred CCCCcceEEECCCCCEEEEeCCCCeEEEECCCCce------E--EEEeCC----CCceeEEEcCC-CcEEEEeccCC---
Confidence 34699999999999999999888999999987532 1 233222 37899999996 89999985311
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCc-eEEEecCCCCCCcccccCcc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGE-FLSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~-~~~~~~~~~~~~p~~~~~~~ 201 (332)
..++++||.++|++.....+. ...+++++++.+++++|++|+..+.||++++++. ...+...+.+........+.
T Consensus 94 ~~~v~~~d~~~g~~~~~~~~~----~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~ 169 (306)
T 2p4o_A 94 SIPVVSLVKSDGTVETLLTLP----DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP 169 (306)
T ss_dssp SCEEEEEECTTSCEEEEEECT----TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC
T ss_pred cceEEEEcCCCCeEEEEEeCC----CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCC
Confidence 125888998888876655552 2467899999888889999999999999998743 22221111111000012356
Q ss_pred ccCeEEEccCc-eEEEEeCCCCeEEEEeCCC-CCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc-eEEEEcCC
Q 020019 202 GLNGIVYHPDG-FLIVIHTFSGNLFKIDIVD-GVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS-ARLVESSD 278 (332)
Q Consensus 202 ~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~-~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~-~~~v~~~d 278 (332)
.|||| ++|| +|||+++.+++|++|+++. ++.. ..+.+. .+..|+||++|++|+|||++... ...++.++
T Consensus 170 ~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~--~~~~~~----~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 170 AANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPG--EPEIFV----EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp SEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBC--CCEEEE----ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred cCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCC--ccEEEe----ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 79999 7787 9999999999999999875 3221 122222 12579999999999999998533 23356667
Q ss_pred CceEEEEEeeecCCCcccceEEEEE-----CCeEEEEEecCccccCCccceeeeeec
Q 020019 279 GWETAAVVAKFSGPVHRLATAATVK-----DGRVYLNHMLGFGYPKKKHALVEAVFS 330 (332)
Q Consensus 279 g~~~~~~~~~~~~~~~~~pt~va~~-----~g~lyv~~~~g~~~~~~~~~~~~~~~~ 330 (332)
| +... ...+..+ +..|+++++. +++|||++..+...+....+..+.+|.
T Consensus 242 G-~~~~-~~~~~~~-~~~p~~~a~~g~~~d~~~LyVt~~~~~~~~~~~~~~~g~v~~ 295 (306)
T 2p4o_A 242 R-STTI-IAQAEQG-VIGSTAVAFGQTEGDCTAIYVVTNGGMFLPPPTGVVPANVVR 295 (306)
T ss_dssp C-CEEE-EECGGGT-CTTEEEEEECCSTTTTTEEEEEECTTSSSCCTTCCCCEEEEE
T ss_pred C-CEEE-Eeecccc-cCCceEEEEecccCCCCEEEEECCCCcccCCCcccccceEEE
Confidence 7 3322 2233322 5789999994 379999887665555334466677763
No 4
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.93 E-value=4e-24 Score=196.23 Aligned_cols=251 Identities=14% Similarity=0.122 Sum_probs=170.6
Q ss_pred ceeEEEecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCc----------------CCCc
Q 020019 35 THVYHYHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLEL----------------TGNG 98 (332)
Q Consensus 35 ~~~i~~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~----------------~~~~ 98 (332)
.+.|.+.+.-..||+++++++|++||++..+++|+++++.+++. . .+...... ....
T Consensus 9 ~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-----~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (322)
T 2fp8_A 9 LKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-----V--DFAYASPYWNKAFCENSTDAEKRPLCGR 81 (322)
T ss_dssp -CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-----E--EEEESCTTCCHHHHTTCCCGGGHHHHCC
T ss_pred cceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-----E--EEecccccccccccccccchhccccCCC
Confidence 34566776556999999999999777887789999999876542 1 23211100 0136
Q ss_pred cceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECC-CCcEEEEeCC--------
Q 020019 99 SLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVT-------- 169 (332)
Q Consensus 99 ~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~-------- 169 (332)
|.||++++++|+|||++.. ..+.+||+++++........ ......+||++++|+ +|++||+|..
T Consensus 82 p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~~~~~~~~-~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 82 TYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHATQLATSV-DGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp EEEEEEETTTTEEEEEETT------TEEEEECTTCEECEEEESEE-TTEECSCEEEEEECTTTCCEEEEESCSSCCTTCH
T ss_pred CceEEEcCCCCcEEEEECC------CCEEEEeCCCCEEEEecccC-CCCcccccceEEEecCCCEEEEECCccccccccc
Confidence 8999999734999999863 35889998876544332221 111236799999999 9999999975
Q ss_pred ---------CCeEEEEcCC-CceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccce
Q 020019 170 ---------GSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEE 238 (332)
Q Consensus 170 ---------~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~ 238 (332)
.+.|++++++ ++...+.. .+..||||++++|| .|||+++.+++|+++++++... + .
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----------~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-~-~ 221 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKETTLLLK-----------ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-G-T 221 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTEEEEEEE-----------EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-T-C
T ss_pred ceehcccCCCceEEEEeCCCCEEEEecc-----------CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC-C-c
Confidence 3689999987 44333221 23468999999999 7999999999999999985422 1 2
Q ss_pred eEEEEecCCCCCCCCeEEEeCCCeEEEEeCC-----------ceEEEEcCCCceEEEEEeeecCCCcccceEEEEECCeE
Q 020019 239 IKLIRVAGGPLSFGDGLELLSPTKLVVAGNP-----------SARLVESSDGWETAAVVAKFSGPVHRLATAATVKDGRV 307 (332)
Q Consensus 239 ~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~-----------~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~~~g~l 307 (332)
.+.+.. +..|+||++|++|+|||++.. ....++.++| +.........+..+..|+++++.+++|
T Consensus 222 ~~~~~~----~~gP~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G-~~~~~~~~~~g~~~~~~~~~~~~~g~L 296 (322)
T 2fp8_A 222 AEVLVK----IPNPGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFG-NILEVIPLPPPFAGEHFEQIQEHDGLL 296 (322)
T ss_dssp EEEEEE----CSSEEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTS-CEEEEEECCTTTTTSCCCEEEEETTEE
T ss_pred cceEEe----CCCCCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCC-CEEEEEECCCCCccccceEEEEeCCEE
Confidence 222221 112999999999999999754 2234566777 322222211111267889998899999
Q ss_pred EEEEecCccc
Q 020019 308 YLNHMLGFGY 317 (332)
Q Consensus 308 yv~~~~g~~~ 317 (332)
||++.....+
T Consensus 297 ~v~~~~~~~i 306 (322)
T 2fp8_A 297 YIGTLFHGSV 306 (322)
T ss_dssp EEECSSCSEE
T ss_pred EEeecCCCce
Confidence 9986554443
No 5
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.90 E-value=2.7e-21 Score=174.62 Aligned_cols=231 Identities=13% Similarity=0.131 Sum_probs=163.5
Q ss_pred ecCCccccceEEcCCCC-EEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 41 HSSSFFRECAKWDDSGR-RFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 41 ~~~~~~pegia~d~~g~-~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
......||+++|+++|+ +|+++...++|++++++++ . . .+. .+. ..|.+|+++++ |+||+++..
T Consensus 24 ~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~-----~--~~~-~~~---~~~~~l~~~~d-g~l~v~~~~-- 88 (296)
T 3e5z_A 24 ADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L-----S--PEM-HPS---HHQNGHCLNKQ-GHLIACSHG-- 88 (296)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E-----E--EEE-SSC---SSEEEEEECTT-CCEEEEETT--
T ss_pred ecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e-----E--EEE-CCC---CCcceeeECCC-CcEEEEecC--
Confidence 34445999999999998 7778888899999998865 2 1 333 222 36899999996 999999853
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC-----------------CCCeEEEEcCCCce
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV-----------------TGSKIWKVGVKGEF 182 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~-----------------~~~~I~~v~~~g~~ 182 (332)
...|.+||+++|+........ .......++++++|++|++|++|+ ..+.|++++++|+.
T Consensus 89 ---~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~ 164 (296)
T 3e5z_A 89 ---LRRLERQREPGGEWESIADSF-EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTL 164 (296)
T ss_dssp ---TTEEEEECSTTCCEEEEECEE-TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCE
T ss_pred ---CCeEEEEcCCCCcEEEEeecc-CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCE
Confidence 357999999888876543321 111235799999999999999875 24689999998776
Q ss_pred EEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCC-CCCCccceeEEEEecCCCCCCCCeEEEeCCC
Q 020019 183 LSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIV-DGVGEGEEIKLIRVAGGPLSFGDGLELLSPT 261 (332)
Q Consensus 183 ~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~-~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG 261 (332)
..+.. ....|+||++++||.+++++...++|++++++ +++... ....+ . .....|+||++|++|
T Consensus 165 ~~~~~-----------~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~-~~~~~--~-~~~~~p~~i~~d~~G 229 (296)
T 3e5z_A 165 SAPIR-----------DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEY-QGVHF--T-VEPGKTDGLRVDAGG 229 (296)
T ss_dssp EEEEC-----------CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEE-EEEEE--C-CSSSCCCSEEEBTTS
T ss_pred EEeec-----------CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcC-CCeEe--e-CCCCCCCeEEECCCC
Confidence 55432 12457899999999444999999999999987 342100 01222 2 234679999999999
Q ss_pred eEEEEeCCceEEEEcCCCceEEEEEeeecCCCcccceEEEEE---CCeEEEEEe
Q 020019 262 KLVVAGNPSARLVESSDGWETAAVVAKFSGPVHRLATAATVK---DGRVYLNHM 312 (332)
Q Consensus 262 ~l~va~~~~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~~---~g~lyv~~~ 312 (332)
+||++.+.. ..+..++| +....+..+. . |+++++. +++|||++.
T Consensus 230 ~l~v~~~~~-v~~~~~~g----~~~~~~~~~~-~-~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 230 LIWASAGDG-VHVLTPDG----DELGRVLTPQ-T-TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp CEEEEETTE-EEEECTTS----CEEEEEECSS-C-CCEEEEESTTSCEEEEEET
T ss_pred CEEEEcCCe-EEEECCCC----CEEEEEECCC-C-ceeEEEECCCCCEEEEEcC
Confidence 999999443 44566777 2333343343 3 8899983 357999654
No 6
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.89 E-value=2.8e-20 Score=166.78 Aligned_cols=233 Identities=12% Similarity=0.057 Sum_probs=166.1
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCc-C--CCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLEL-T--GNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
.|.+++++++|++|+++..+++|.+++++ ++. .. .+. ..+. . ...|.++++++.+|++|+++.. .
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~----~~--~~~-~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~ 98 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRF----KF--QFG-ECGKRDSQLLYPNRVAVVRNSGDIIVTERS----P 98 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCE----EE--EEC-CBSSSTTCBSSEEEEEEETTTTEEEEEECG----G
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCC-CcE----EE--Eec-ccCCCcccccCceEEEEEcCCCeEEEEcCC----C
Confidence 79999999999999888778999999987 431 11 222 1110 1 1368999995335999999842 1
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
...|.+||. +++....+.. .....|+++++|++|++|+++...+.|++++++|+....+.... ....
T Consensus 99 ~~~i~~~d~-~g~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~--------~~~~ 165 (286)
T 1q7f_A 99 THQIQIYNQ-YGQFVRKFGA----TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSK--------HLEF 165 (286)
T ss_dssp GCEEEEECT-TSCEEEEECT----TTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTT--------TCSS
T ss_pred CCEEEEECC-CCcEEEEecC----ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCC--------ccCC
Confidence 357899994 5666544432 12367999999999999999999999999999988655443211 2346
Q ss_pred cCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc--eEEEEcCCCc
Q 020019 203 LNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS--ARLVESSDGW 280 (332)
Q Consensus 203 ~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~--~~~v~~~dg~ 280 (332)
|++|+++++|+||+++..+++|+++++++. .+..+...+ .+..|.+|+++++|+||+++... ...++..+|.
T Consensus 166 p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-----~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 166 PNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-----YLRQIGGEG-ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp EEEEEECSSSEEEEEEGGGTEEEEEETTCC-----EEEEESCTT-TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC
T ss_pred cEEEEECCCCCEEEEECCCCEEEEEcCCCC-----EEEEEccCC-ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC
Confidence 889999999999999999999999998643 444444332 35689999999999999998432 3345667773
Q ss_pred eEEEEEeeecCCCcccceEEEE-ECCeEEEEEe
Q 020019 281 ETAAVVAKFSGPVHRLATAATV-KDGRVYLNHM 312 (332)
Q Consensus 281 ~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~~ 312 (332)
....+.. ......|.++++ .+|+|||++.
T Consensus 240 ~~~~~~~---~~~~~~~~~i~~~~~g~l~vs~~ 269 (286)
T 1q7f_A 240 LISALES---KVKHAQCFDVALMDDGSVVLASK 269 (286)
T ss_dssp EEEEEEE---SSCCSCEEEEEEETTTEEEEEET
T ss_pred EEEEEcc---cCCCCcceeEEECCCCcEEEECC
Confidence 2222222 122445888999 7899999863
No 7
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.89 E-value=1.2e-20 Score=171.57 Aligned_cols=229 Identities=17% Similarity=0.196 Sum_probs=160.7
Q ss_pred ecCCccccceEEcCCCC-EEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 41 HSSSFFRECAKWDDSGR-RFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 41 ~~~~~~pegia~d~~g~-~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
.....++||++|+++|+ +|+++..+++|++++++ ++. . .+. .+. ..+++++++++ |+||+++..
T Consensus 41 ~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-----~--~~~-~~~---~~~~gl~~d~d-G~l~v~~~~-- 105 (305)
T 3dr2_A 41 YDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-----D--VLL-DAT---AFTNGNAVDAQ-QRLVHCEHG-- 105 (305)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-----E--EEE-ESC---SCEEEEEECTT-SCEEEEETT--
T ss_pred ecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-----E--EEe-CCC---CccceeeECCC-CCEEEEECC--
Confidence 44445899999999998 77777888999999984 441 1 233 222 36899999996 999999753
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC-----------------CCeEEEEcCC-Cc
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT-----------------GSKIWKVGVK-GE 181 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~-----------------~~~I~~v~~~-g~ 181 (332)
...|.+||.+ |+........ .......||++++|++|++|+||.. .+.|++++++ |+
T Consensus 106 ---~~~v~~~~~~-g~~~~~~~~~-~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~ 180 (305)
T 3dr2_A 106 ---RRAITRSDAD-GQAHLLVGRY-AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP 180 (305)
T ss_dssp ---TTEEEEECTT-SCEEEEECEE-TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC
T ss_pred ---CCEEEEECCC-CCEEEEEecc-CCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc
Confidence 3578999986 6655433221 1112357999999999999999741 3689999985 66
Q ss_pred eEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCC-----CeEEEEeCCCCCCccceeEEEEecCCCCCCCCeE
Q 020019 182 FLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFS-----GNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGL 255 (332)
Q Consensus 182 ~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~-----~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi 255 (332)
...+. . ...|||+++++|| .||+++... ++|++++++.+.. ...+.+ .. .....|+||
T Consensus 181 ~~~~~---~---------~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l--~~~~~~-~~-~~~~~pdgi 244 (305)
T 3dr2_A 181 LQRMA---D---------LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL--HDRRHF-AS-VPDGLPDGF 244 (305)
T ss_dssp CEEEE---E---------ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEE--EEEEEE-EC-CSSSCCCSE
T ss_pred EEEEe---c---------CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc--cCCeEE-EE-CCCCCCCeE
Confidence 55432 1 2357899999999 899999874 7899999875421 011111 11 123579999
Q ss_pred EEeCCCeEEEEeCCceEEEEcCCCceEEEEEeeecCCCcccceEEEE--ECCeEEEEEe
Q 020019 256 ELLSPTKLVVAGNPSARLVESSDGWETAAVVAKFSGPVHRLATAATV--KDGRVYLNHM 312 (332)
Q Consensus 256 ~~~~dG~l~va~~~~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~--~~g~lyv~~~ 312 (332)
++|++|+||+++... ..++.++|. +...+..+. .|+++++ ++++|||++.
T Consensus 245 ~~d~~G~lwv~~~~g-v~~~~~~g~----~~~~~~~~~--~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 245 CVDRGGWLWSSSGTG-VCVFDSDGQ----LLGHIPTPG--TASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EECTTSCEEECCSSE-EEEECTTSC----EEEEEECSS--CCCEEEECTTSCEEEEEET
T ss_pred EECCCCCEEEecCCc-EEEECCCCC----EEEEEECCC--ceeEEEEeCCCCEEEEEcC
Confidence 999999999999654 445677883 333333343 4889999 4578999764
No 8
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.88 E-value=2.9e-20 Score=172.19 Aligned_cols=253 Identities=16% Similarity=0.184 Sum_probs=166.1
Q ss_pred ccccceEEcCCCCEEEEE-ec-CC--eEEEEECCCCCCCccceeeeEEec---ccCcCCCccceEEEeCCCCeEEEEEeC
Q 020019 45 FFRECAKWDDSGRRFIVS-FL-DG--GIGQVAVPDDYPPGTVLEEVTLVK---DLELTGNGSLGLVLDHPRNRLLVVAAD 117 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~-~~-~g--~I~~vd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gi~vd~~~g~l~v~~~~ 117 (332)
..|++++++++|++|++. .+ .+ +|++++ +++. . .+.. .+...-..|.||++|++ |+|||++..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~~-----~--~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT--QDGL-----I--PFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNG 86 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE--TTEE-----E--ESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECH
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC--CCCe-----e--cCCCcccCcccceeEeeEEEEcCC-CcEEEEcCC
Confidence 589999999999999886 32 34 899998 3431 1 1211 11101137999999997 999999853
Q ss_pred cCCCccceEEEEECCCCcEEEEEecCCC-CCCCCCccceEECCC-CcEEEEeC---CCCeEEEEcCC-CceEEEecCC-C
Q 020019 118 VFGNKYSAVAAYDLSTWNRLFLTQLSGP-SDGKSCADDVTVDAE-GNAYVTDV---TGSKIWKVGVK-GEFLSIISSP-L 190 (332)
Q Consensus 118 ~~~~~~~~l~~~d~~~g~~~~~~~l~~~-~~~~~~~ndiavd~d-G~lyvtd~---~~~~I~~v~~~-g~~~~~~~~~-~ 190 (332)
.......+|.+||++++++...+.++.. .....+++++++|++ |.+|++|+ ..+.|++++.+ |+..+++... .
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~ 166 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG 166 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT
T ss_pred CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc
Confidence 1000025799999999997777776422 112367899999975 68999999 78999999986 6665554321 1
Q ss_pred CCC-cc--ccc---------------CccccCeEEEccCc-eEEEEeCCCCeEEEEeCC---CCCCc-cceeEEEEecCC
Q 020019 191 FTP-KE--WYK---------------NLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIV---DGVGE-GEEIKLIRVAGG 247 (332)
Q Consensus 191 ~~~-p~--~~~---------------~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~---~~~~~-~~~~~~v~~~g~ 247 (332)
+.. +. ... -..++|||++++|| .||+++..+++||+++.. .+... .+....+...|
T Consensus 167 ~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g- 245 (343)
T 2qe8_A 167 IAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS- 245 (343)
T ss_dssp TSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE-
T ss_pred ccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc-
Confidence 100 00 000 11468999999999 999999999999999864 12110 00000011111
Q ss_pred CCCCCCeEEEeCCCeEEEEeCCce-EEEEcC-CCceEEEEEeeecCCCcccceEEEE-ECCeEEEEEe
Q 020019 248 PLSFGDGLELLSPTKLVVAGNPSA-RLVESS-DGWETAAVVAKFSGPVHRLATAATV-KDGRVYLNHM 312 (332)
Q Consensus 248 ~~~~pdGi~~~~dG~l~va~~~~~-~~v~~~-dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~~ 312 (332)
..+.|+||++|++|+||+++.... ..+..+ +| +...+.. .+.+.+|+++++ .+++|||++.
T Consensus 246 ~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G-~~~~~~~---~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 246 EKPICDGISIDKDHNIYVGDLAHSAIGVITSADR-AYKLLVT---DEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT-EEEEEEE---CGGGSCEEEEEECTTSCEEEEEC
T ss_pred cCCCCceEEECCCCCEEEEccCCCeEEEEECCCC-CEEEEEE---CCceecCCeeEECCCCcEEEEeC
Confidence 224799999999999999985432 334455 77 4333332 345788999999 7899999543
No 9
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.88 E-value=9.2e-21 Score=174.41 Aligned_cols=248 Identities=15% Similarity=0.114 Sum_probs=164.8
Q ss_pred cccceEEcCCCCEEEEEecC------------------------CeEEEEECCCCCCCccceeeeEEecccCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLD------------------------GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLG 101 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~------------------------g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 101 (332)
.|.+++++++|++|+++..+ ++|+++|+.+++. . .......+ ..|.|
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~----~---~~~~~~~~--~~p~g 95 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI----L---QSSGKNLF--YLPHG 95 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE----E---EEECTTTC--SSEEE
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE----E---eccCCCcc--CCceE
Confidence 68899999999999887544 4799999876762 1 12211111 37999
Q ss_pred EEEeCCCCeEEEEEeCcCCCccceEEEEECCCCc-EEEEEecCC-CC---CCCCCccceEECC-CCcEEEEeC-CCCeEE
Q 020019 102 LVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWN-RLFLTQLSG-PS---DGKSCADDVTVDA-EGNAYVTDV-TGSKIW 174 (332)
Q Consensus 102 i~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~-~~~~~~l~~-~~---~~~~~~ndiavd~-dG~lyvtd~-~~~~I~ 174 (332)
|+++++ |+||+++.. ..+|.+||++... ....+.-.+ ++ .....|+++++++ +|++||+|+ .+++|+
T Consensus 96 ia~d~~-g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 96 LSIDTD-GNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp EEECTT-SCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred EEECCC-CCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 999996 899999864 4579999986542 222222110 11 1235799999999 799999997 799999
Q ss_pred EEcCCCceEEEecCCCCCCcccccCccccCeEEEccC-ceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCC
Q 020019 175 KVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPD-GFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGD 253 (332)
Q Consensus 175 ~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~d-G~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pd 253 (332)
+++++|+....+.............+..|+||+++++ |.|||++..+++|.++++++++ .+..+...+ ....|.
T Consensus 170 ~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~----~~~~~~~~~-~~~~~~ 244 (329)
T 3fvz_A 170 QFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE----FVREIKHAS-FGRNVF 244 (329)
T ss_dssp EECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC----EEEEECCTT-TTTCEE
T ss_pred EEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc----EEEEEeccc-cCCCcc
Confidence 9999998765543211100000013456999999999 6999999999999999998662 455554331 123444
Q ss_pred eEEEeC------CCeEEEEeCC--ceEEEEcCCCceEEEEEeeec--CCCcccceEEEE-ECCeEEEEEecCccc
Q 020019 254 GLELLS------PTKLVVAGNP--SARLVESSDGWETAAVVAKFS--GPVHRLATAATV-KDGRVYLNHMLGFGY 317 (332)
Q Consensus 254 Gi~~~~------dG~l~va~~~--~~~~v~~~dg~~~~~~~~~~~--~~~~~~pt~va~-~~g~lyv~~~~g~~~ 317 (332)
++++.| +|++|+++.. ...++...+| +++..+. ...+..|.++++ .+|.|||++.....+
T Consensus 245 ~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g----~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 245 AISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG----EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp EEEEETTEEEEEECCCCTTCSCCCCEEEEETTTC----CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred eeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC----eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEE
Confidence 555555 5666665432 2334445666 2333332 234788999999 778999988765543
No 10
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.88 E-value=7.2e-21 Score=168.69 Aligned_cols=231 Identities=15% Similarity=0.166 Sum_probs=160.3
Q ss_pred cccceEEcCCCCEEE-EEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDSGRRFI-VSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~g~~~~-~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
.|++++++++|++|+ ++...++|++++..+... ....... ...|.+|+++++ |++|+++. .+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~--------~~~~~~~--~~~p~~i~~~~~-g~l~v~~~------~~ 87 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT--------TVLPFNG--LYQPQGLAVDGA-GTVYVTDF------NN 87 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-------------EECCCCS--CCSCCCEEECTT-CCEEEEET------TT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc--------ceEeeCC--cCCcceeEECCC-CCEEEEcC------CC
Confidence 899999999999888 557789999998765431 2221111 137899999996 88999975 24
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccC
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
.|.+||++++.... ... .+...|+++++|++|++|+++...+.|++++............ ....|+
T Consensus 88 ~i~~~d~~~~~~~~-~~~----~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~p~ 153 (270)
T 1rwi_B 88 RVVTLAAGSNNQTV-LPF----DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT---------GLNDPD 153 (270)
T ss_dssp EEEEECTTCSCCEE-CCC----CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC---------SCCSCC
T ss_pred EEEEEeCCCceEee-eec----CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc---------cCCCce
Confidence 78999987654422 211 1236799999999999999999999999997654322221111 234689
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc-eEEEEcCCCceEE
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS-ARLVESSDGWETA 283 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~-~~~v~~~dg~~~~ 283 (332)
+|+++++|+||+++..+++|+++++++. ...... . ..+..|.+|+++++|+||+++... ...+...++ ...
T Consensus 154 ~i~~~~~g~l~v~~~~~~~i~~~~~~~~-----~~~~~~-~-~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~-~~~ 225 (270)
T 1rwi_B 154 GVAVDNSGNVYVTDTDNNRVVKLEAESN-----NQVVLP-F-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS-TTS 225 (270)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEECTTTC-----CEEECC-C-SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC-SCC
T ss_pred eEEEeCCCCEEEEECCCCEEEEEecCCC-----ceEeec-c-cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC-Ccc
Confidence 9999999999999999999999998865 222221 1 234679999999999999998432 233445555 221
Q ss_pred EEEeeecCCCcccceEEEE-ECCeEEEEEecCcccc
Q 020019 284 AVVAKFSGPVHRLATAATV-KDGRVYLNHMLGFGYP 318 (332)
Q Consensus 284 ~~~~~~~~~~~~~pt~va~-~~g~lyv~~~~g~~~~ 318 (332)
.. .....+..|.++++ .+|+|||++.....+.
T Consensus 226 ~~---~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 226 TV---LPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp EE---CCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred ee---eccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 11 12223577999999 6789999877665543
No 11
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.88 E-value=5.9e-20 Score=163.83 Aligned_cols=216 Identities=15% Similarity=0.152 Sum_probs=152.3
Q ss_pred ccccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 45 FFRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 45 ~~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
..|+++++|++ +++|+++...++|++++++++.. . .+.. .+. ..|.+|++|+++++||+++.. .
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-----~--~~~~-~~~--~~p~~ia~d~~~~~lyv~d~~-----~ 100 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-----T--TIIR-QDL--GSPEGIALDHLGRTIFWTDSQ-----L 100 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-----E--EEEC-TTC--CCEEEEEEETTTTEEEEEETT-----T
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-----E--EEEE-CCC--CCccEEEEEecCCeEEEEECC-----C
Confidence 47899999986 56777778789999999875542 2 3332 222 379999999876899999864 4
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCC--CCeEEEEcCCCceEEEecCCCCCCcccccCc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVT--GSKIWKVGVKGEFLSIISSPLFTPKEWYKNL 200 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~--~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~ 200 (332)
.+|.+++++......... .+...|+++++|++ |++|++|.. .+.|++++.+|+....+... ..
T Consensus 101 ~~I~~~~~~g~~~~~~~~-----~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~---------~~ 166 (267)
T 1npe_A 101 DRIEVAKMDGTQRRVLFD-----TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD---------NL 166 (267)
T ss_dssp TEEEEEETTSCSCEEEEC-----SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT---------TC
T ss_pred CEEEEEEcCCCCEEEEEE-----CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC---------CC
Confidence 578999987543322221 12368999999995 789999987 68999999998754333211 23
Q ss_pred cccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc--eEEEEcC
Q 020019 201 VGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS--ARLVESS 277 (332)
Q Consensus 201 ~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~--~~~v~~~ 277 (332)
..|+||++++++ +|||++..+++|+++++++. ....+. . .+..|+||+++ ++.||+++... ...+...
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~-----~~~~~~-~--~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP-----GRRKVL-E--GLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTEE-----EEEEEE-E--CCCSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC-----ceEEEe-c--CCCCceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 468999999986 99999999999999999854 222222 2 24679999998 68999998543 3333344
Q ss_pred CCceEEEEEeeecCCCcccceEEEE
Q 020019 278 DGWETAAVVAKFSGPVHRLATAATV 302 (332)
Q Consensus 278 dg~~~~~~~~~~~~~~~~~pt~va~ 302 (332)
+| ++...+.......|.++++
T Consensus 238 ~g----~~~~~i~~g~~~~p~gi~~ 258 (267)
T 1npe_A 238 IS----KEMDTFHPHKQTRLYGITI 258 (267)
T ss_dssp TT----EEEEEECCSSCCCCCCEEE
T ss_pred CC----CceEEEccccccccceeee
Confidence 46 3444444332345888887
No 12
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.87 E-value=2.3e-19 Score=160.72 Aligned_cols=235 Identities=10% Similarity=0.047 Sum_probs=169.5
Q ss_pred EEEecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeC
Q 020019 38 YHYHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAAD 117 (332)
Q Consensus 38 i~~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~ 117 (332)
+.+......|++++++++|++|++....+.|.++++. ++. . .+. .+. ....|.+|+++++ |++|+++..
T Consensus 13 ~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-----~--~~~-~~~-~~~~~~~i~~~~~-g~l~v~~~~ 81 (300)
T 2qc5_A 13 FNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-----K--EFE-VPT-PDAKVMCLIVSSL-GDIWFTENG 81 (300)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-----E--EEE-CSS-TTCCEEEEEECTT-SCEEEEETT
T ss_pred EecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-----E--EEE-CCC-CCCcceeEEECCC-CCEEEEecC
Confidence 3334445599999999999999988778999999987 542 1 222 121 1137899999986 999999753
Q ss_pred cCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccc
Q 020019 118 VFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWY 197 (332)
Q Consensus 118 ~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~ 197 (332)
.+.|.+||++ ++.. .+.++ . ....|+++++|++|++|+++...+.|++++++|+...+....
T Consensus 82 -----~~~v~~~d~~-g~~~-~~~~~--~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~-------- 143 (300)
T 2qc5_A 82 -----ANKIGKLSKK-GGFT-EYPLP--Q-PDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPN-------- 143 (300)
T ss_dssp -----TTEEEEECTT-SCEE-EEECS--S-TTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSS--------
T ss_pred -----CCeEEEECCC-CCeE-EecCC--C-CCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCC--------
Confidence 3579999988 6664 33442 1 236799999999999999999899999999998765442111
Q ss_pred cCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc-eEEEEc
Q 020019 198 KNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS-ARLVES 276 (332)
Q Consensus 198 ~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~-~~~v~~ 276 (332)
....|++|+++++|.||+++..+++|+++++ ++ ....+..+ .....|.+|+++++|+||+++... ...+..
T Consensus 144 -~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g-----~~~~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 144 -KGSYPAFITLGSDNALWFTENQNNSIGRITN-TG-----KLEEYPLP-TNAAAPVGITSGNDGALWFVEIMGNKIGRIT 215 (300)
T ss_dssp -TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC-----CEEEEECS-STTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred -CCCCceeEEECCCCCEEEEecCCCeEEEECC-CC-----cEEEeeCC-CCCCCcceEEECCCCCEEEEccCCCEEEEEc
Confidence 1246789999999999999998999999998 45 23334444 245679999999999999998543 233444
Q ss_pred CCCceEEEEEeeecCCCcccceEEEE-ECCeEEEEEec
Q 020019 277 SDGWETAAVVAKFSGPVHRLATAATV-KDGRVYLNHML 313 (332)
Q Consensus 277 ~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~~~ 313 (332)
.++ +..... .. .....|.++++ .+|+|||+...
T Consensus 216 ~~g-~~~~~~--~~-~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 216 TTG-EISEYD--IP-TPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp TTC-CEEEEE--CS-STTCCEEEEEECSTTCEEEEETT
T ss_pred CCC-cEEEEE--CC-CCCCCceEEEECCCCCEEEeccC
Confidence 566 322221 11 23567899999 68899997754
No 13
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.87 E-value=3.4e-19 Score=165.47 Aligned_cols=244 Identities=16% Similarity=0.186 Sum_probs=155.6
Q ss_pred ccccceEEcCCCCEEEEE------------ecCCeEEEEECCCCCCCccceeeeEEecc-cCcCCCccceEEEeCC---C
Q 020019 45 FFRECAKWDDSGRRFIVS------------FLDGGIGQVAVPDDYPPGTVLEEVTLVKD-LELTGNGSLGLVLDHP---R 108 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~------------~~~g~I~~vd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gi~vd~~---~ 108 (332)
..||.++++++|.+|+++ ...|+|+++|+++.... .++..+... ++...-.|.||.+.++ +
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~---~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~ 126 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA---VSELEIIGNTLDISSFNPHGISTFIDDDNT 126 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCC---EEECEEECSSCCGGGCCEEEEEEEECTTCC
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc---eEEEEccCCCCCcCceeeeeeEEEECCCCc
Confidence 479999999999888876 14789999998743221 111122211 1111127999998652 2
Q ss_pred CeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC-----------------CCC
Q 020019 109 NRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV-----------------TGS 171 (332)
Q Consensus 109 g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~-----------------~~~ 171 (332)
.+|||++..... ..-.++.+|..++.......+.+ ....+|||++++++|++|+++. ..+
T Consensus 127 ~~L~Vvnh~~~~-s~ielf~~d~~~~~~~~~~~~~g--~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g 203 (355)
T 3sre_A 127 VYLLVVNHPGSS-STVEVFKFQEEEKSLLHLKTIRH--KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWS 203 (355)
T ss_dssp EEEEEEECSTTC-CEEEEEEEETTTTEEEEEEEECC--TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCE
T ss_pred EEEEEEECCCCC-CeEEEEEEECCCCEEEEEecccc--CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCcc
Confidence 479999864211 12246777776655554445543 2357899999999999999875 247
Q ss_pred eEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCC-CCCccceeEEEEecCCCC
Q 020019 172 KIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVD-GVGEGEEIKLIRVAGGPL 249 (332)
Q Consensus 172 ~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~-~~~~~~~~~~v~~~g~~~ 249 (332)
.||+++++ +...+.. ++..||||+++||| +|||+++..++|++++.+. ++. ...+.+..+
T Consensus 204 ~vyr~d~~-~~~~~~~-----------~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l--~~~~~~~~~---- 265 (355)
T 3sre_A 204 FVTYYSPN-DVRVVAE-----------GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTL--TPLRVLSFD---- 265 (355)
T ss_dssp EEEEECTT-CCEEEEE-----------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCE--EEEEEEECS----
T ss_pred EEEEEECC-eEEEeec-----------CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcE--ecCEEEeCC----
Confidence 89999985 5443322 34578999999999 9999999999999999873 322 122333332
Q ss_pred CCCCeEEEeC-CCeEEEEeC-Cc-------------eEE--EEc---CCCceEEEEEeeecCCCcccceEEEEECCeEEE
Q 020019 250 SFGDGLELLS-PTKLVVAGN-PS-------------ARL--VES---SDGWETAAVVAKFSGPVHRLATAATVKDGRVYL 309 (332)
Q Consensus 250 ~~pdGi~~~~-dG~l~va~~-~~-------------~~~--v~~---~dg~~~~~~~~~~~~~~~~~pt~va~~~g~lyv 309 (332)
..||||++|+ +|+||++.. .. ..+ +.. .++ +..++.+. .+..+..-|.+...+|+|||
T Consensus 266 g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~~~~~~~~-~v~~v~~d-dG~~l~~~T~a~~~~g~L~i 343 (355)
T 3sre_A 266 TLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEP-KVTVVYAE-NGTVLQGSTVAAVYKGKLLI 343 (355)
T ss_dssp SEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEECTTSSSC-EEEEEEEE-CSSSCCSEEEEEEETTEEEE
T ss_pred CCCceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEEccCCCCc-EEEEEEEc-CCCEEEeeEEEEEECCEEEE
Confidence 5799999999 599999752 21 111 121 122 33333333 23334443444448999999
Q ss_pred EEecC
Q 020019 310 NHMLG 314 (332)
Q Consensus 310 ~~~~g 314 (332)
.+-+.
T Consensus 344 Gsv~~ 348 (355)
T 3sre_A 344 GTVFH 348 (355)
T ss_dssp EESSS
T ss_pred EEcCC
Confidence 87655
No 14
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.86 E-value=1.2e-19 Score=168.84 Aligned_cols=216 Identities=13% Similarity=0.103 Sum_probs=153.8
Q ss_pred ccccceEEcC-CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 45 FFRECAKWDD-SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 45 ~~pegia~d~-~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
..|+++++|+ ++++|+++...++|++++++++.. + .+.. .+. ..|.||++|+.+++||+++.. .
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-----~--~~~~-~~~--~~p~glavd~~~g~ly~~d~~-----~ 137 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-----E--EVVS-TGL--ESPGGLAVDWVHDKLYWTDSG-----T 137 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----E--EEEC-SSC--SCCCEEEEETTTTEEEEEETT-----T
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCc-----e--EEEe-CCC--CCccEEEEecCCCeEEEEcCC-----C
Confidence 3789999996 466777778889999999986542 2 3332 222 378999999866999999864 4
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCCC-CeEEEEcCCCceEEEecCCCCCCcccccCcc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVTG-SKIWKVGVKGEFLSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~~-~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~ 201 (332)
..|.+++++......... .....|+++++||. |.||++|+.. ++|++++++|+....+... ...
T Consensus 138 ~~I~~~~~dG~~~~~l~~-----~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---------~~~ 203 (349)
T 3v64_C 138 SRIEVANLDGAHRKVLLW-----QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---------HLF 203 (349)
T ss_dssp TEEEEEETTSCSCEEEEC-----TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS---------SCS
T ss_pred CeEEEEcCCCCceEEEEe-----CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC---------CCC
Confidence 578999987543322221 22468999999985 7899999998 9999999998754433221 235
Q ss_pred ccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCceEE--EEcCC
Q 020019 202 GLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSARL--VESSD 278 (332)
Q Consensus 202 ~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~~~--v~~~d 278 (332)
.||||++++++ +|||++...++|+++++++. ..+.+.. ..+..|+||+++ ++.||+++....++ +...+
T Consensus 204 ~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~-----~~~~~~~--~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~ 275 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-----HRKAVIS--QGLPHPFAITVF-EDSLYWTDWHTKSINSANKFT 275 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC-----SCEEEEC--SSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred CcceEEEeCCCCEEEEEECCCCEEEEEeCCCC-----ceEEEEe--CCCCCceEEEEE-CCEEEEecCCCCeEEEEEccC
Confidence 68999999866 99999999999999999854 2333322 246789999995 57999998544332 33356
Q ss_pred CceEEEEEeeecCCCcccceEEEE
Q 020019 279 GWETAAVVAKFSGPVHRLATAATV 302 (332)
Q Consensus 279 g~~~~~~~~~~~~~~~~~pt~va~ 302 (332)
|.....+.. .+..|.++++
T Consensus 276 G~~~~~i~~-----~~~~p~gi~v 294 (349)
T 3v64_C 276 GKNQEIIRN-----KLHFPMDIHT 294 (349)
T ss_dssp CCSCEEEEC-----SCSCCCCEEE
T ss_pred CCccEEecc-----CCCCCceEEE
Confidence 733322221 2567888887
No 15
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=5.5e-19 Score=158.17 Aligned_cols=227 Identities=13% Similarity=0.103 Sum_probs=165.3
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
..|.+++++++|++|++....++|++++++ ++. . .+. .+. .+..|.+|+++++ |++|+++.. .+
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-----~--~~~-~~~-~~~~~~~i~~~~~-g~l~v~~~~-----~~ 125 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-----T--EYP-LPQ-PDSGPYGITEGLN-GDIWFTQLN-----GD 125 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-----E--EEE-CSS-TTCCEEEEEECST-TCEEEEETT-----TT
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-----E--Eec-CCC-CCCCCccceECCC-CCEEEEccC-----CC
Confidence 478999999999999988767899999987 542 1 222 221 1247899999986 999999753 35
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccC
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
.|.+||++ ++... ..++ . ....|+++++|++|++|+++...+.|++++++|+...+.... ....+.
T Consensus 126 ~i~~~~~~-g~~~~-~~~~--~-~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~---------~~~~~~ 191 (300)
T 2qc5_A 126 RIGKLTAD-GTIYE-YDLP--N-KGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPT---------NAAAPV 191 (300)
T ss_dssp EEEEECTT-SCEEE-EECS--S-TTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSS---------TTCCEE
T ss_pred eEEEECCC-CCEEE-ccCC--C-CCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCC---------CCCCcc
Confidence 78999987 76653 3342 1 246899999999999999999999999999988766532111 234678
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC-ceEEEEcCCCceEE
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP-SARLVESSDGWETA 283 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~-~~~~v~~~dg~~~~ 283 (332)
+|+++++|.||+++..+++|++++++ + ....+..+ .....|.+|+++++|+||+++.. ....++.+++ +..
T Consensus 192 ~i~~d~~g~l~v~~~~~~~i~~~~~~-g-----~~~~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-~~~ 263 (300)
T 2qc5_A 192 GITSGNDGALWFVEIMGNKIGRITTT-G-----EISEYDIP-TPNARPHAITAGKNSEIWFTEWGANQIGRITNDN-TIQ 263 (300)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECTT-C-----CEEEEECS-STTCCEEEEEECSTTCEEEEETTTTEEEEECTTS-CEE
T ss_pred eEEECCCCCEEEEccCCCEEEEEcCC-C-----cEEEEECC-CCCCCceEEEECCCCCEEEeccCCCeEEEECCCC-cEE
Confidence 99999999999999999999999983 4 23334443 24567999999999999999843 2233445566 322
Q ss_pred EEEeeecCCCcccceEEEE-ECCeEEEEEe
Q 020019 284 AVVAKFSGPVHRLATAATV-KDGRVYLNHM 312 (332)
Q Consensus 284 ~~~~~~~~~~~~~pt~va~-~~g~lyv~~~ 312 (332)
... +. .....|.++++ .+|+||++..
T Consensus 264 ~~~--~~-~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 264 EYQ--LQ-TENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp EEE--CC-STTCCCCCEEECTTSCEEEECS
T ss_pred EEE--CC-ccCCccceeEeCCCCCEEEEcc
Confidence 221 11 13466899999 6899999765
No 16
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.86 E-value=7.3e-19 Score=157.30 Aligned_cols=235 Identities=12% Similarity=0.056 Sum_probs=167.5
Q ss_pred EEecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCc
Q 020019 39 HYHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADV 118 (332)
Q Consensus 39 ~~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~ 118 (332)
.+......|.+++++++|++|+++...+.|+++++. ++. . .+. .+. ....|.+|+++++ |++|+++..
T Consensus 9 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-----~--~~~-~~~-~~~~~~~i~~~~~-g~l~v~~~~- 76 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-----T--EYP-LPT-PDAKVMCLTISSD-GEVWFTENA- 76 (299)
T ss_dssp ECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-----E--EEE-CSS-TTCCEEEEEECTT-SCEEEEETT-
T ss_pred cCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-----E--Eec-CCc-ccCceeeEEECCC-CCEEEeCCC-
Confidence 344445689999999999999988767899999987 542 1 222 121 1247899999996 999999753
Q ss_pred CCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCccccc
Q 020019 119 FGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 119 ~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~ 198 (332)
.+.|.+||++ ++... +.++ . ....|+++++|++|++|+++...+.|++++++|+...+....
T Consensus 77 ----~~~i~~~~~~-g~~~~-~~~~--~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~--------- 138 (299)
T 2z2n_A 77 ----ANKIGRITKK-GIIKE-YTLP--N-PDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPN--------- 138 (299)
T ss_dssp ----TTEEEEECTT-SCEEE-EECS--S-TTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSS---------
T ss_pred ----CCeEEEECCC-CcEEE-EeCC--C-cCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCC---------
Confidence 3578999986 55432 3342 1 246799999999999999999899999999987765442111
Q ss_pred CccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc-eEEEEcC
Q 020019 199 NLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS-ARLVESS 277 (332)
Q Consensus 199 ~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~-~~~v~~~ 277 (332)
....+++|+++++|+||+++..++.|+++++ ++ ....+..+ .....|.+|+++++|+||+++... ...+...
T Consensus 139 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g-----~~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 139 KGSYPSFITLGSDNALWFTENQNNAIGRITE-SG-----DITEFKIP-TPASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC-----CEEEEECS-STTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CC-----cEEEeeCC-CCCCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 1245789999999999999998899999998 55 33334443 234678999999999999998432 2223444
Q ss_pred CCceEEEEEeeecCCCcccceEEEE-ECCeEEEEEecC
Q 020019 278 DGWETAAVVAKFSGPVHRLATAATV-KDGRVYLNHMLG 314 (332)
Q Consensus 278 dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~~~g 314 (332)
++ +...+ ... .....|.++++ .+|+|||+....
T Consensus 212 ~g-~~~~~--~~~-~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 212 SG-EITEF--KIP-TPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp TC-CEEEE--ECS-STTCCEEEEEECSTTCEEEEETTT
T ss_pred CC-cEEEE--ECC-CCCCCceeEEECCCCCEEEeccCC
Confidence 66 32222 111 23567899999 688999976443
No 17
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.86 E-value=1.7e-19 Score=165.92 Aligned_cols=247 Identities=15% Similarity=0.164 Sum_probs=167.4
Q ss_pred CccccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 44 SFFRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 44 ~~~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
...+|+++|+++ +.+|+++...++|+++++.+++. . .+. .+ ..+.+++++++ |++|++..
T Consensus 48 ~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-----~--~~~-~~----~~v~~i~~~~d-g~l~v~~~------ 108 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFNILERELHELHLASGRK-----T--VHA-LP----FMGSALAKISD-SKQLIASD------ 108 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-----E--EEE-CS----SCEEEEEEEET-TEEEEEET------
T ss_pred CCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-----E--EEE-CC----CcceEEEEeCC-CeEEEEEC------
Confidence 348999999997 55777777789999999986641 1 222 22 26788999996 99999863
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC------CCeEEEEcCCCceEEEecCCCCCCccc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT------GSKIWKVGVKGEFLSIISSPLFTPKEW 196 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~------~~~I~~v~~~g~~~~~~~~~~~~~p~~ 196 (332)
..|++||+++++......... ......++++++|++|++|+++.. .+.||+++ +|+...+..
T Consensus 109 -~gl~~~d~~~g~~~~~~~~~~-~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~~~--------- 176 (326)
T 2ghs_A 109 -DGLFLRDTATGVLTLHAELES-DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLFA--------- 176 (326)
T ss_dssp -TEEEEEETTTCCEEEEECSST-TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEEE---------
T ss_pred -CCEEEEECCCCcEEEEeeCCC-CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEeeC---------
Confidence 258999999888765443321 111357899999999999998753 47899999 777554321
Q ss_pred ccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCC--CC-CCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC-ce
Q 020019 197 YKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIV--DG-VGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP-SA 271 (332)
Q Consensus 197 ~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~--~~-~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~-~~ 271 (332)
....++++++++|| .||+++...++|++++.+ ++ .... ........ .....|+|+++|++|+||++... ..
T Consensus 177 --~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~-~~~~~~~~-~~~~~p~gi~~d~~G~lwva~~~~~~ 252 (326)
T 2ghs_A 177 --DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK-AEVFIDST-GIKGGMDGSVCDAEGHIWNARWGEGA 252 (326)
T ss_dssp --EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC-CEEEEECT-TSSSEEEEEEECTTSCEEEEEETTTE
T ss_pred --CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC-ceEEEECC-CCCCCCCeeEECCCCCEEEEEeCCCE
Confidence 12357899999999 899999999999999986 44 3211 11112222 12357999999999999999843 22
Q ss_pred EEEEcCCCceEEEEEeeecCCCcccceEEEEE---CCeEEEEEecC-cccc-CCccceeeeeec
Q 020019 272 RLVESSDGWETAAVVAKFSGPVHRLATAATVK---DGRVYLNHMLG-FGYP-KKKHALVEAVFS 330 (332)
Q Consensus 272 ~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~~---~g~lyv~~~~g-~~~~-~~~~~~~~~~~~ 330 (332)
..+..++| + +...+..+ ...|+++++. +++|||+...+ .... ..+.|.++++|.
T Consensus 253 v~~~d~~g-~---~~~~i~~~-~~~~~~~af~g~d~~~L~vt~~~~~~~~~~~~~~p~~g~~~~ 311 (326)
T 2ghs_A 253 VDRYDTDG-N---HIARYEVP-GKQTTCPAFIGPDASRLLVTSAREHLDDDAITANPQHGLTFE 311 (326)
T ss_dssp EEEECTTC-C---EEEEEECS-CSBEEEEEEESTTSCEEEEEEBCTTCCHHHHHHCTTTTCEEE
T ss_pred EEEECCCC-C---EEEEEECC-CCCcEEEEEecCCCCEEEEEecCCCCChhHhccCCCCceEEE
Confidence 33455666 2 33333333 3468999984 36899965443 3222 234566777764
No 18
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.86 E-value=1.5e-19 Score=170.50 Aligned_cols=216 Identities=13% Similarity=0.104 Sum_probs=153.5
Q ss_pred ccccceEEcC-CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 45 FFRECAKWDD-SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 45 ~~pegia~d~-~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
..|++++||+ ++++|+++...++|++++++++.. + .+.. .+. ..|.||++|+.+++||+++.. .
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-----~--~~~~-~~~--~~p~glavd~~~g~lY~~d~~-----~ 180 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-----E--EVVS-TGL--ESPGGLAVDWVHDKLYWTDSG-----T 180 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-----E--EEEC-SSC--SCCCCEEEETTTTEEEEEETT-----T
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-----E--EEEe-CCC--CCccEEEEEeCCCeEEEEcCC-----C
Confidence 3799999996 466777778889999999886541 2 3332 222 378999999866999999874 4
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCCC-CeEEEEcCCCceEEEecCCCCCCcccccCcc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVTG-SKIWKVGVKGEFLSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~~-~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~ 201 (332)
..|.+++++......... .+...|+++++||+ |.||++|+.. ++|++++++|+....+... .+.
T Consensus 181 ~~I~~~~~dg~~~~~l~~-----~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---------~~~ 246 (386)
T 3v65_B 181 SRIEVANLDGAHRKVLLW-----QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---------HLF 246 (386)
T ss_dssp TEEEECBTTSCSCEEEEC-----SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---------SCS
T ss_pred CeEEEEeCCCCceEEeec-----CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC---------CCC
Confidence 578888887543332221 22468999999985 6899999998 9999999998754433222 234
Q ss_pred ccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCceEE--EEcCC
Q 020019 202 GLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSARL--VESSD 278 (332)
Q Consensus 202 ~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~~~--v~~~d 278 (332)
.||||++++++ +|||++..+++|+++++++. ..+.+.. ..+..|+||+++ ++.||+++....++ +...+
T Consensus 247 ~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~-----~~~~~~~--~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~ 318 (386)
T 3v65_B 247 WPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-----HRKAVIS--QGLPHPFAITVF-EDSLYWTDWHTKSINSANKFT 318 (386)
T ss_dssp CEEEEEEEGGGTEEEEEETTTTEEEEECTTSC-----SCEEEEC--SSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred CeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC-----eeEEEEE--CCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCC
Confidence 68999999776 99999999999999998854 2333322 246789999995 57899998544332 33366
Q ss_pred CceEEEEEeeecCCCcccceEEEE
Q 020019 279 GWETAAVVAKFSGPVHRLATAATV 302 (332)
Q Consensus 279 g~~~~~~~~~~~~~~~~~pt~va~ 302 (332)
|.....+. . .+..|.++++
T Consensus 319 G~~~~~i~----~-~~~~p~gi~v 337 (386)
T 3v65_B 319 GKNQEIIR----N-KLHFPMDIHT 337 (386)
T ss_dssp CCSCEEEE----C-SCSCCCCEEE
T ss_pred CcceEEEc----c-CCCCCceEEE
Confidence 73322222 2 2567888887
No 19
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.85 E-value=7e-19 Score=168.38 Aligned_cols=239 Identities=12% Similarity=0.074 Sum_probs=161.0
Q ss_pred cccceEEcCC---CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 46 FRECAKWDDS---GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 46 ~pegia~d~~---g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
.|+++++|++ |++|+++.. ++|+++++.+++. . ++.. . ...|.+|+++++ |+|||++..... .
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v-----~--~~~~--~--~~~P~giavd~d-G~lyVad~~~~~-~ 205 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYV-----D--IKTT--N--IGQCADVNFTLN-GDMVVVDDQSSD-T 205 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEE-----E--EECC--C--CSCEEEEEECTT-CCEEEEECCSCT-T
T ss_pred CCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEE-----E--Eeec--C--CCCccEEEECCC-CCEEEEcCCCCc-c
Confidence 7999999984 888888865 9999999976652 1 3332 2 237999999997 779999863211 1
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCC-Cce-EEEecCCCCCCcccccC
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVK-GEF-LSIISSPLFTPKEWYKN 199 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~-g~~-~~~~~~~~~~~p~~~~~ 199 (332)
...++.++...+... ...+. ....|+++++|+ +|+|||+|..+++|++++++ |+. ..+.....
T Consensus 206 ~~gv~~~~~~~~~~~-~~~~~----~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~--------- 271 (433)
T 4hw6_A 206 NTGIYLFTRASGFTE-RLSLC----NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT--------- 271 (433)
T ss_dssp SEEEEEECGGGTTCC-EEEEE----ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC---------
T ss_pred cceEEEEECCCCeec-ccccc----ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC---------
Confidence 123555665432211 11121 136799999999 79999999999999999998 665 33322211
Q ss_pred ccccCeEEEccCc-eEEEEeCCCCeEEEEeCCC--CCCccceeEEEEec-C-----------CCCCCCCeEEE-------
Q 020019 200 LVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVD--GVGEGEEIKLIRVA-G-----------GPLSFGDGLEL------- 257 (332)
Q Consensus 200 ~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~--~~~~~~~~~~v~~~-g-----------~~~~~pdGi~~------- 257 (332)
...+.+|+++++| +|||++..+++|++++++. +... ....+... + ..+..|.||++
T Consensus 272 ~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~--~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~ 349 (433)
T 4hw6_A 272 KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLA--VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYA 349 (433)
T ss_dssp CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBC--CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGT
T ss_pred CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccC--cEEEEEecCCCCccCCCcccceEEcCCccEEEEcccccc
Confidence 1234589999999 7999999999999998763 3110 11122110 1 23567999999
Q ss_pred --eCCCeEEEEeCCce-EEEEcCCCceEEEEEeeec-------------CCCcccceEEEEE--CCeEEEEEecCc
Q 020019 258 --LSPTKLVVAGNPSA-RLVESSDGWETAAVVAKFS-------------GPVHRLATAATVK--DGRVYLNHMLGF 315 (332)
Q Consensus 258 --~~dG~l~va~~~~~-~~v~~~dg~~~~~~~~~~~-------------~~~~~~pt~va~~--~g~lyv~~~~g~ 315 (332)
+++|+|||++.... ..++.++| ...++..... ..++..|.++++. +|+|||+.....
T Consensus 350 ~dd~~g~lyvaD~~n~~I~~~~~~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~ 424 (433)
T 4hw6_A 350 GEEDEYDFYFCDRDSHTVRVLTPEG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNH 424 (433)
T ss_dssp TSSCCEEEEEEETTTTEEEEECTTS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGT
T ss_pred ccCCCCcEEEEECCCCEEEEECCCC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCC
Confidence 89999999984332 22456788 5545543211 1147889999996 899999876443
No 20
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.85 E-value=9e-19 Score=166.41 Aligned_cols=239 Identities=12% Similarity=0.071 Sum_probs=163.0
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
.|.+++++++|++|+++..+++|++++++++.. . ++... +..+. ++++++.+.||+++.+. ...
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~-----~--~~~~~----~~~~~-ia~~~~g~~l~~~d~~~----~~~ 195 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKV-----T--TVHPG----FKGGK-PAVTKDKQRVYSIGWEG----THT 195 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEE-----E--EEEET----CCBCB-CEECTTSSEEEEEBSST----TCE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEE-----E--Eeecc----CCCCc-eeEecCCCcEEEEecCC----Cce
Confidence 899999999999999888789999999986652 1 33321 12456 99999866788887531 127
Q ss_pred EEEEECCCCcEEEEE-ecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCCCceEEEe-cCCCCCCcccccCccc
Q 020019 126 VAAYDLSTWNRLFLT-QLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVKGEFLSII-SSPLFTPKEWYKNLVG 202 (332)
Q Consensus 126 l~~~d~~~g~~~~~~-~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~g~~~~~~-~~~~~~~p~~~~~~~~ 202 (332)
|++||..++...... .+. ......|+++++++ +|+||+++. .+.|+++++++.....+ ..... .. ....
T Consensus 196 I~~~d~~~~~~~~~~g~~~--~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~-g~----~~~~ 267 (409)
T 3hrp_A 196 VYVYMKASGWAPTRIGQLG--STFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELS-GS----LGTN 267 (409)
T ss_dssp EEEEEGGGTTCEEEEEECC--TTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCC-SC----CCCS
T ss_pred EEEEEcCCCceeEEeeecc--chhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEeccccc-CC----CCCC
Confidence 999998766543222 221 11246899999999 689999876 78999999985533332 11111 00 1122
Q ss_pred cC-eEEEccC-ceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecC------------CCCCCCCeEEEeCCCeEEEEeC
Q 020019 203 LN-GIVYHPD-GFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAG------------GPLSFGDGLELLSPTKLVVAGN 268 (332)
Q Consensus 203 ~n-Gi~~~~d-G~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g------------~~~~~pdGi~~~~dG~l~va~~ 268 (332)
|. +|+++|+ |+||+++..+++|++++++.. +..+.-.+ ..+..|.||+++++|+||+++.
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECTTCC------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEecCCC------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 44 9999995 699999999999999998743 22222110 1256799999999999999986
Q ss_pred -CceE--EEEcCCCceEEEEEeeec----------CCCcccceEEEE-ECCeEEEEEecCc
Q 020019 269 -PSAR--LVESSDGWETAAVVAKFS----------GPVHRLATAATV-KDGRVYLNHMLGF 315 (332)
Q Consensus 269 -~~~~--~v~~~dg~~~~~~~~~~~----------~~~~~~pt~va~-~~g~lyv~~~~g~ 315 (332)
...+ .+..++| ...++..... ...+..|.++++ .+++|||+.....
T Consensus 342 ~~~~~I~~~~~~~G-~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~ 401 (409)
T 3hrp_A 342 FKGYCLRKLDILDG-YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGK 401 (409)
T ss_dssp TTTCEEEEEETTTT-EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTC
T ss_pred CCCCEEEEEECCCC-EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCC
Confidence 5433 2333677 4444443210 013788999999 6799999876554
No 21
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.85 E-value=2e-18 Score=154.44 Aligned_cols=228 Identities=10% Similarity=0.079 Sum_probs=163.8
Q ss_pred CccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 44 SFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
...|.+++++++|++|++....+.|++++++ ++. + .+. .+. ....|.+|+++++ |++|+++.. .
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-----~--~~~-~~~-~~~~~~~i~~~~~-g~l~v~~~~-----~ 119 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-----K--EYT-LPN-PDSAPYGITEGPN-GDIWFTEMN-----G 119 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-----E--EEE-CSS-TTCCEEEEEECTT-SCEEEEETT-----T
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-----E--EEe-CCC-cCCCceeeEECCC-CCEEEEecC-----C
Confidence 4578999999999999988767899999986 431 1 222 221 2247899999996 999999753 3
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCcccc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGL 203 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~ 203 (332)
+.|.+||+ +++... +.++ . ....|+++++|++|++|+++...+.|++++++|+...+.... ....+
T Consensus 120 ~~i~~~d~-~g~~~~-~~~~--~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~---------~~~~~ 185 (299)
T 2z2n_A 120 NRIGRITD-DGKIRE-YELP--N-KGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIPT---------PASGP 185 (299)
T ss_dssp TEEEEECT-TCCEEE-EECS--S-TTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSS---------TTCCE
T ss_pred ceEEEECC-CCCEEE-ecCC--C-CCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeCCC---------CCCcc
Confidence 57899998 666543 2332 1 246799999999999999999999999999987765432111 13457
Q ss_pred CeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC-ceEEEEcCCCceE
Q 020019 204 NGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP-SARLVESSDGWET 282 (332)
Q Consensus 204 nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~-~~~~v~~~dg~~~ 282 (332)
.+|+++++|.||+++...+.|+++++ ++ ....+..+ .....|.+|+++++|+||+++.. ....+..+++ +.
T Consensus 186 ~~i~~~~~g~l~v~~~~~~~i~~~~~-~g-----~~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g-~~ 257 (299)
T 2z2n_A 186 VGITKGNDDALWFVEIIGNKIGRITT-SG-----EITEFKIP-TPNARPHAITAGAGIDLWFTEWGANKIGRLTSNN-II 257 (299)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECT-TC-----CEEEEECS-STTCCEEEEEECSTTCEEEEETTTTEEEEEETTT-EE
T ss_pred eeEEECCCCCEEEEccCCceEEEECC-CC-----cEEEEECC-CCCCCceeEEECCCCCEEEeccCCceEEEECCCC-ce
Confidence 89999999999999998999999998 55 33444444 24567999999999999999743 2222344466 33
Q ss_pred EEEEeeecCCCcccceEEEEECCeEEEEEe
Q 020019 283 AAVVAKFSGPVHRLATAATVKDGRVYLNHM 312 (332)
Q Consensus 283 ~~~~~~~~~~~~~~pt~va~~~g~lyv~~~ 312 (332)
..+. +. .....|.++++.+++||++..
T Consensus 258 ~~~~--~~-~~~~~~~~i~~~~g~l~v~~~ 284 (299)
T 2z2n_A 258 EEYP--IQ-IKSAEPHGICFDGETIWFAME 284 (299)
T ss_dssp EEEE--CS-SSSCCEEEEEECSSCEEEEET
T ss_pred EEEe--CC-CCCCccceEEecCCCEEEEec
Confidence 2221 11 224568888887889999764
No 22
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.85 E-value=1.2e-18 Score=159.79 Aligned_cols=221 Identities=16% Similarity=0.118 Sum_probs=151.5
Q ss_pred CCccccceEEcCC-CCEEEEEecCCeEEEEECCCC---CCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCc
Q 020019 43 SSFFRECAKWDDS-GRRFIVSFLDGGIGQVAVPDD---YPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADV 118 (332)
Q Consensus 43 ~~~~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~ 118 (332)
....|+++++|++ +++|+++...++|+++++++. .. .+ .+.. .++ ..|.||++|..+++||+++..
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~----~~--~~~~-~~~--~~p~glavd~~~~~ly~~d~~- 97 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS----YD--TVIS-RDI--QAPDGLAVDWIHSNIYWTDSV- 97 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------CE--EEEC-SSC--SCCCEEEEETTTTEEEEEETT-
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc----cE--EEEe-CCC--CCcCEEEEeecCCeEEEEECC-
Confidence 3348999999986 567777888899999998751 21 11 2332 122 378999999756899999864
Q ss_pred CCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCCC-CeEEEEcCCCceEEEecCCCCCCccc
Q 020019 119 FGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVTG-SKIWKVGVKGEFLSIISSPLFTPKEW 196 (332)
Q Consensus 119 ~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~~-~~I~~v~~~g~~~~~~~~~~~~~p~~ 196 (332)
...|.++|++.......... ....|+++++||+ |.+|++|+.. ++|++++++|+....+...
T Consensus 98 ----~~~I~~~~~~g~~~~~~~~~-----~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~------- 161 (316)
T 1ijq_A 98 ----LGTVSVADTKGVKRKTLFRE-----NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE------- 161 (316)
T ss_dssp ----TTEEEEEETTSSSEEEEEEC-----TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS-------
T ss_pred ----CCEEEEEeCCCCceEEEEEC-----CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC-------
Confidence 45789999875444333321 2468999999984 7899999986 8999999999865543222
Q ss_pred ccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCceEE--
Q 020019 197 YKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSARL-- 273 (332)
Q Consensus 197 ~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~~~-- 273 (332)
.+..|+||++++++ +||+++...++|+++++++. ..+.+...+..+..|+||+++. +.||+++....++
T Consensus 162 --~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-----~~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~ 233 (316)
T 1ijq_A 162 --NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-----NRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFS 233 (316)
T ss_dssp --SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-----SCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEE
T ss_pred --CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-----ceEEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEE
Confidence 23568999999876 99999999999999999854 2333322213467899999985 8999998554333
Q ss_pred EEcCCCceEEEEEeeecCCCcccceEEEE
Q 020019 274 VESSDGWETAAVVAKFSGPVHRLATAATV 302 (332)
Q Consensus 274 v~~~dg~~~~~~~~~~~~~~~~~pt~va~ 302 (332)
+...+|.....+.. .+..|.++++
T Consensus 234 ~~~~~g~~~~~i~~-----~~~~p~~i~v 257 (316)
T 1ijq_A 234 ANRLTGSDVNLLAE-----NLLSPEDMVL 257 (316)
T ss_dssp EETTTCCCCEEEEC-----SCSCCCCEEE
T ss_pred EeCCCCcceEEEec-----CCCCceEEEE
Confidence 23345622222322 2455666665
No 23
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.84 E-value=2.8e-18 Score=156.93 Aligned_cols=241 Identities=20% Similarity=0.181 Sum_probs=163.4
Q ss_pred EecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 40 YHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 40 ~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
+......|++++++++|++|+++...+.|+++++++++. . .+.... ...+.+|+++++ |++|++.....
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~-----~--~~~~~~---~~~~~~i~~~~d-g~l~v~~~~~~ 108 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI-----K--RPFVSH---KANPAAIKIHKD-GRLFVCYLGDF 108 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-----E--EEEECS---SSSEEEEEECTT-SCEEEEECTTS
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE-----E--EEeeCC---CCCcceEEECCC-CcEEEEeCCCC
Confidence 344445889999999999988887789999999886652 1 232111 236899999996 89999975310
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC------CCeEEEEcCCC-ceEEEecCCCCC
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT------GSKIWKVGVKG-EFLSIISSPLFT 192 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~------~~~I~~v~~~g-~~~~~~~~~~~~ 192 (332)
. ....|++||+++++......- ......++++++|++|++|+++.. .+.|+++++++ +...+..
T Consensus 109 ~-~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----- 179 (333)
T 2dg1_A 109 K-STGGIFAATENGDNLQDIIED---LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ----- 179 (333)
T ss_dssp S-SCCEEEEECTTSCSCEEEECS---SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-----
T ss_pred C-CCceEEEEeCCCCEEEEEEcc---CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-----
Confidence 0 114799999988776533321 112357999999999999999875 47899999885 4433321
Q ss_pred CcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCC-CCCccceeEE----EEecCCCCCCCCeEEEeCCCeEEEE
Q 020019 193 PKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVD-GVGEGEEIKL----IRVAGGPLSFGDGLELLSPTKLVVA 266 (332)
Q Consensus 193 ~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~-~~~~~~~~~~----v~~~g~~~~~pdGi~~~~dG~l~va 266 (332)
....++++++++|| .||+++...++|+++++++ +. .... +.........|++|+++++|++|++
T Consensus 180 ------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~----~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~ 249 (333)
T 2dg1_A 180 ------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGV----TIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA 249 (333)
T ss_dssp ------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSS----SEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE
T ss_pred ------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCc----CcccccceEEEecCCCCCCCceEECCCCCEEEE
Confidence 12347899999999 7999998889999999863 31 1211 1111011247999999999999999
Q ss_pred eCC-ceEEEEcCCCceEEEEEeeecCCC-----cccceEEEE-EC-CeEEEEEecC
Q 020019 267 GNP-SARLVESSDGWETAAVVAKFSGPV-----HRLATAATV-KD-GRVYLNHMLG 314 (332)
Q Consensus 267 ~~~-~~~~v~~~dg~~~~~~~~~~~~~~-----~~~pt~va~-~~-g~lyv~~~~g 314 (332)
+.. ....+..+++.. ...+..+. +..|+++++ .+ ++|||++..+
T Consensus 250 ~~~~~~v~~~d~~g~~----~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 250 MYGQGRVLVFNKRGYP----IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EETTTEEEEECTTSCE----EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EcCCCEEEEECCCCCE----EEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 743 223345556622 22222221 236899999 44 6999976654
No 24
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.84 E-value=1.1e-18 Score=157.86 Aligned_cols=238 Identities=20% Similarity=0.220 Sum_probs=161.5
Q ss_pred ecCCccccceEEcCCCCEEEE-------EecCCeEEEEECCCCCCCccceeeeEEecccCc--CCCccceEEEeCCCCeE
Q 020019 41 HSSSFFRECAKWDDSGRRFIV-------SFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLEL--TGNGSLGLVLDHPRNRL 111 (332)
Q Consensus 41 ~~~~~~pegia~d~~g~~~~~-------~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gi~vd~~~g~l 111 (332)
...-..|++++++++|++|++ +...++|+++++.+++. . .+. .+.. ....|.++++++++|+|
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~-----~--~~~-~~~~~~~~~~~~~i~~~~~~g~l 85 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKK-----T--VIC-KPEVNGYGGIPAGCQCDRDANQL 85 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCE-----E--EEE-CCEETTEECCEEEEEECSSSSEE
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcE-----E--EEE-ecccCCCCCCCceEEEecCCCcE
Confidence 333349999999999999998 55678999999776652 1 222 1110 11368999999854899
Q ss_pred EEEEeCcCCCccceEEEEECCCCcEEEE-EecCCCCCCCCCccceEECCCCcEEEEeCCC---------------CeEEE
Q 020019 112 LVVAADVFGNKYSAVAAYDLSTWNRLFL-TQLSGPSDGKSCADDVTVDAEGNAYVTDVTG---------------SKIWK 175 (332)
Q Consensus 112 ~v~~~~~~~~~~~~l~~~d~~~g~~~~~-~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~---------------~~I~~ 175 (332)
|+++.. ..|.+||++ ++.... .... .......++++++|++|++|+++... +.|++
T Consensus 86 ~v~~~~------~~l~~~d~~-g~~~~~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 86 FVADMR------LGLLVVQTD-GTFEEIAKKDS-EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp EEEETT------TEEEEEETT-SCEEECCSBCT-TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred EEEECC------CCEEEEeCC-CCEEEEEeccC-CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEE
Confidence 999852 368999998 776543 2211 11123579999999999999999765 78999
Q ss_pred EcCCCceEEEecCCCCCCcccccCccccCeEEEc----cCc-eEEEEeCCCCeEEEEeCC-CCCCccceeEEE-EecCCC
Q 020019 176 VGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYH----PDG-FLIVIHTFSGNLFKIDIV-DGVGEGEEIKLI-RVAGGP 248 (332)
Q Consensus 176 v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~----~dG-~Lyva~~~~~~i~~id~~-~~~~~~~~~~~v-~~~g~~ 248 (332)
++++|+...+.. ....+++++++ +|| .||+++..+++|++++++ +++. ...+.+ ..++ .
T Consensus 158 ~~~~g~~~~~~~-----------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~--~~~~~~~~~~~-~ 223 (314)
T 1pjx_A 158 FTTDGQMIQVDT-----------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI--ENKKVWGHIPG-T 223 (314)
T ss_dssp ECTTSCEEEEEE-----------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE--EEEEEEEECCC-C
T ss_pred ECCCCCEEEecc-----------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc--ccceEEEECCC-C
Confidence 999877654421 12357899999 999 899999999999999976 3421 011112 2231 2
Q ss_pred C-CCCCeEEEeCCCeEEEEeCC-ceEEEEcCC-CceEEEEEeeecCCCcccceEEEE-ECCe-EEEEEec
Q 020019 249 L-SFGDGLELLSPTKLVVAGNP-SARLVESSD-GWETAAVVAKFSGPVHRLATAATV-KDGR-VYLNHML 313 (332)
Q Consensus 249 ~-~~pdGi~~~~dG~l~va~~~-~~~~v~~~d-g~~~~~~~~~~~~~~~~~pt~va~-~~g~-lyv~~~~ 313 (332)
. ..|++|+++++|+||+++.. ....+..++ | + ....+..+ ...|+++++ .+++ |||++..
T Consensus 224 ~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g-~---~~~~~~~~-~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 224 HEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG-Q---PKMRIRCP-FEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp SSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB-S---CSEEEECS-SSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC-c---EeEEEeCC-CCCceeEEECCCCCEEEEEeCC
Confidence 2 56999999999999999732 223344454 5 2 22222223 357899999 5555 9997654
No 25
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.83 E-value=3.6e-18 Score=163.35 Aligned_cols=241 Identities=8% Similarity=0.090 Sum_probs=160.0
Q ss_pred cccceEEcC--CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 46 FRECAKWDD--SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 46 ~pegia~d~--~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
.|.++++|+ ++++|+++.. ++|+++++++++. . .+.. . ...|.+|+++++.++||+++..... ..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v-----~--~~~~--~--~~~P~~ia~d~~G~~lyvad~~~~~-~~ 204 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYV-----S--TVYS--G--LSKVRTICWTHEADSMIITNDQNNN-DR 204 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEE-----E--EEEC--C--CSCEEEEEECTTSSEEEEEECCSCT-TS
T ss_pred CCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEE-----E--EEec--C--CCCcceEEEeCCCCEEEEEeCCCCc-cc
Confidence 899999996 4788888865 8999999986541 1 3332 2 2479999999974449999864221 11
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCCCceE-EEecCCCCCCcccccCcc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVKGEFL-SIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~g~~~-~~~~~~~~~~p~~~~~~~ 201 (332)
..++.++.+ +.......+. ....|+++++|+ +|+|||+|..+++|+++++++... .+.... ...
T Consensus 205 ~~v~~~~~~-g~~~~~~~l~----~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~---------~~~ 270 (430)
T 3tc9_A 205 PNNYILTRE-SGFKVITELT----KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ---------DSG 270 (430)
T ss_dssp EEEEEEEGG-GTSCSEEEEE----ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS---------SSS
T ss_pred ceEEEEeCC-Cceeeeeeec----cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC---------CCC
Confidence 245566654 3322111221 135789999999 789999999999999999986644 332211 124
Q ss_pred ccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEec-C-----------CCCCCCC-eEEEe--------C
Q 020019 202 GLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA-G-----------GPLSFGD-GLELL--------S 259 (332)
Q Consensus 202 ~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~-g-----------~~~~~pd-Gi~~~--------~ 259 (332)
.|+||+++++| +|||++..+++|++++.+.....-.....+... + ..+..|. |++++ +
T Consensus 271 ~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~ 350 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSD 350 (430)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSC
T ss_pred cceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCC
Confidence 68899999999 699999999999999887421000011222211 1 2356788 89884 5
Q ss_pred CCeEEEEeC--CceEEEEcCCCceEEEEEeee----cC---------CCcccceEEEE-E-CCeEEEEEecCc
Q 020019 260 PTKLVVAGN--PSARLVESSDGWETAAVVAKF----SG---------PVHRLATAATV-K-DGRVYLNHMLGF 315 (332)
Q Consensus 260 dG~l~va~~--~~~~~v~~~dg~~~~~~~~~~----~~---------~~~~~pt~va~-~-~g~lyv~~~~g~ 315 (332)
+|+|||++. +.++ ++.++| ...++.... .+ .+|..|.++++ . ++.|||++....
T Consensus 351 ~g~lyvaD~~n~~I~-~i~~~G-~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~ 421 (430)
T 3tc9_A 351 EYDFYFCDRENHCIR-ILTPQG-RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENR 421 (430)
T ss_dssp CEEEEEEEGGGTEEE-EECTTS-EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGT
T ss_pred CCeEEEEECCCcEEE-EECCCC-cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCC
Confidence 699999984 3333 455788 554554421 01 13778999999 4 699999876443
No 26
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.82 E-value=2.2e-18 Score=158.35 Aligned_cols=216 Identities=15% Similarity=0.097 Sum_probs=150.1
Q ss_pred cccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
.|.+++|+++ +++|+++...++|++++++++.. .+ .+.. .++ ..|.||++|..+++||+++.. ..
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~----~~--~~~~-~~l--~~p~glavd~~~g~ly~~d~~-----~~ 101 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES----VQ--NVVV-SGL--LSPDGLACDWLGEKLYWTDSE-----TN 101 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC----CC--EEEE-ECC--SCCCEEEEETTTTEEEEEETT-----TT
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc----eE--EEEc-CCC--CCccEEEEEcCCCeEEEEECC-----CC
Confidence 6778999985 66778888889999999876531 11 2221 122 378999999766999999864 45
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCC-CCeEEEEcCCCceEEEecCCCCCCcccccCccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVT-GSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~-~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
.|.+++++......... .....|+++++||. |.||++|+. .++|++++++|+....+... .+..
T Consensus 102 ~I~~~~~dG~~~~~l~~-----~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---------~l~~ 167 (318)
T 3sov_A 102 RIEVSNLDGSLRKVLFW-----QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS---------EIYW 167 (318)
T ss_dssp EEEEEETTSCSCEEEEC-----SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS---------SCSC
T ss_pred EEEEEECCCCcEEEEEe-----CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC---------CCCC
Confidence 78999987543332221 22468999999985 789999986 79999999998754433222 2356
Q ss_pred cCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCce--EEEEcCCC
Q 020019 203 LNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSA--RLVESSDG 279 (332)
Q Consensus 203 ~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~--~~v~~~dg 279 (332)
||||++++++ +||++|..+++|+++++++. ..+.+. . ..+..|+||+++. +.+|+++.... ..+...+|
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~-----~~~~~~-~-~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-----NRQAVV-K-GSLPHPFALTLFE-DILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSC-----SCEEEE-C-SCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCC-----ceEEEe-c-CCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCC
Confidence 8999999866 99999999999999999854 233332 2 2567899999985 58999985432 32333456
Q ss_pred ceEEEEEeeecCCCcccceEEEE
Q 020019 280 WETAAVVAKFSGPVHRLATAATV 302 (332)
Q Consensus 280 ~~~~~~~~~~~~~~~~~pt~va~ 302 (332)
.....+.. + +..|.++++
T Consensus 240 ~~~~~i~~----~-~~~P~~i~v 257 (318)
T 3sov_A 240 EGLREIHS----D-IFSPMDIHA 257 (318)
T ss_dssp CSCEEEEC----C-CSSCCCEEE
T ss_pred CceEEEeC----C-CCCCcEEEE
Confidence 33223322 2 445666665
No 27
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.82 E-value=1.1e-17 Score=158.60 Aligned_cols=222 Identities=17% Similarity=0.092 Sum_probs=151.1
Q ss_pred ccccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 45 FFRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 45 ~~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
..|.++++|++ +++|+++...++|+++++++... ..+...+.. .+. ..|.||++|..+++||+++.. .
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~---~~~~~~~~~-~~~--~~p~glavD~~~~~lY~~d~~-----~ 180 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG---VSSYDTVIS-RDI--QAPDGLAVDWIHSNIYWTDSV-----L 180 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC---------CCCEEEEC-SSC--SCEEEEEEETTTTEEEEEETT-----T
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCC---CCcceEEEe-CCC--CCcccEEEEecCCceEEEECC-----C
Confidence 48899999975 66777778889999999875220 000113332 122 378999999866999999864 4
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCC-CCeEEEEcCCCceEEEecCCCCCCcccccCcc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVT-GSKIWKVGVKGEFLSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~-~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~ 201 (332)
..|.+++++.......+.- ....|++|++||. |.||++|++ .+.|++++++|+....+... .+.
T Consensus 181 ~~I~~~~~~g~~~~~l~~~-----~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~---------~l~ 246 (400)
T 3p5b_L 181 GTVSVADTKGVKRKTLFRE-----NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---------NIQ 246 (400)
T ss_dssp TEEEEECTTTCSEEEEEEC-----SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS---------SCS
T ss_pred CeEEEEeCCCCceEEEEeC-----CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC---------CCC
Confidence 5788999876554433321 2467999999985 789999987 48999999998754433222 235
Q ss_pred ccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC--ceEEEEcCC
Q 020019 202 GLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP--SARLVESSD 278 (332)
Q Consensus 202 ~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~--~~~~v~~~d 278 (332)
.|+||++++++ +|||+|...++|+++++++. ..+.+......+..|.||+++. +.||+++.. .+..+...+
T Consensus 247 ~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~-----~~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 247 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-----NRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC-----CCEEEEECSSTTSSEEEEEEET-TEEEEEESSSCSEEEEESSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC-----ccEEEEeCCCCCCCCEEEEEeC-CEEEEecCCCCeEEEEEcCC
Confidence 68999999876 99999999999999999854 2333322213567899999965 689999844 333334466
Q ss_pred CceEEEEEeeecCCCcccceEEEE
Q 020019 279 GWETAAVVAKFSGPVHRLATAATV 302 (332)
Q Consensus 279 g~~~~~~~~~~~~~~~~~pt~va~ 302 (332)
|.....+.. .+..|.++++
T Consensus 321 G~~~~~i~~-----~~~~p~~i~v 339 (400)
T 3p5b_L 321 GSDVNLLAE-----NLLSPEDMVL 339 (400)
T ss_dssp CCCCEEEEC-----SCSCEEEEEE
T ss_pred CCceEEEec-----CCCCCceEEE
Confidence 733333322 2456777776
No 28
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.82 E-value=1.4e-17 Score=158.18 Aligned_cols=211 Identities=13% Similarity=0.072 Sum_probs=144.5
Q ss_pred CccccceEEcCCCCEEEEE-ecCC-eEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCC
Q 020019 44 SFFRECAKWDDSGRRFIVS-FLDG-GIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGN 121 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~~-~~~g-~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~ 121 (332)
+..|. ++++++|+.+|+. ...+ +|+++++.++.. .. .+-.........|.++++++++|+||+++.
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~----~~--~~g~~~~~~~~~p~~iav~p~~g~lyv~d~----- 238 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA----PT--RIGQLGSTFSGKIGAVALDETEEWLYFVDS----- 238 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC----EE--EEEECCTTSCSCCCBCEECTTSSEEEEECT-----
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce----eE--EeeeccchhcCCcEEEEEeCCCCeEEEEEC-----
Confidence 44677 9999999876666 4333 899999875542 11 121100102247899999996699999653
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCcc-ceEECC-CCcEEEEeCCCCeEEEEcCCCceEEEecCC---CCC-Ccc
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCAD-DVTVDA-EGNAYVTDVTGSKIWKVGVKGEFLSIISSP---LFT-PKE 195 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~n-diavd~-dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~---~~~-~p~ 195 (332)
.+.|++||++++.................|. +++++| +|++|++|+.+++|++++.+|+...+.... .+. .+.
T Consensus 239 -~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~ 317 (409)
T 3hrp_A 239 -NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLR 317 (409)
T ss_dssp -TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEG
T ss_pred -CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcc
Confidence 3579999998876544333211111123344 999999 489999999999999999999866655432 111 111
Q ss_pred cccCccccCeEEEccCceEEEEeC-CCCeEEEEeCCCCCCccceeEEEEec-C-----------CCCCCCCeEEEeCCCe
Q 020019 196 WYKNLVGLNGIVYHPDGFLIVIHT-FSGNLFKIDIVDGVGEGEEIKLIRVA-G-----------GPLSFGDGLELLSPTK 262 (332)
Q Consensus 196 ~~~~~~~~nGi~~~~dG~Lyva~~-~~~~i~~id~~~~~~~~~~~~~v~~~-g-----------~~~~~pdGi~~~~dG~ 262 (332)
....+..|+||+++++|.|||++. .+++|+++++.++ .+..+... + ..+..|.||+++++|+
T Consensus 318 ~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G-----~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~ 392 (409)
T 3hrp_A 318 EEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG-----YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG 392 (409)
T ss_dssp GGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT-----EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE
T ss_pred cccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC-----EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC
Confidence 112356799999999999999999 9999999997666 34433321 0 1256799999999999
Q ss_pred EEEEeCCceE
Q 020019 263 LVVAGNPSAR 272 (332)
Q Consensus 263 l~va~~~~~~ 272 (332)
|||++....+
T Consensus 393 lyVad~~n~~ 402 (409)
T 3hrp_A 393 YWIAEAWGKA 402 (409)
T ss_dssp EEEEESTTCE
T ss_pred EEEEECCCCe
Confidence 9999855433
No 29
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.82 E-value=2.3e-18 Score=152.52 Aligned_cols=188 Identities=18% Similarity=0.210 Sum_probs=139.2
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
..|.+++++++|++|+++. .++|+++++++... ......+. ..|.+|+++++ |++|+++.. .+
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~--------~~~~~~~~--~~p~~i~~~~~-g~l~v~~~~-----~~ 129 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ--------TVLPFDGL--NYPEGLAVDTQ-GAVYVADRG-----NN 129 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC--------EECCCCSC--SSEEEEEECTT-CCEEEEEGG-----GT
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE--------eeeecCCc--CCCcceEECCC-CCEEEEECC-----CC
Confidence 3799999999999888877 78999999875542 12211121 37899999996 899999863 45
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccC
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
.|.+|+..+..... .. ......|+++++|++|++|+++...+.|+++++++......... ....|.
T Consensus 130 ~i~~~~~~~~~~~~--~~---~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~p~ 195 (270)
T 1rwi_B 130 RVVKLAAGSKTQTV--LP---FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFT---------DITAPW 195 (270)
T ss_dssp EEEEECTTCCSCEE--CC---CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCS---------SCCSEE
T ss_pred EEEEEECCCceeEe--ec---cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeeccc---------CCCCce
Confidence 78889765543321 11 11235799999999999999999999999999987654332111 224678
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS 270 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~ 270 (332)
+|+++++|+||+++..+++|+++++++. ....... ..+..|.+|+++++|+||+++...
T Consensus 196 ~i~~d~~g~l~v~~~~~~~v~~~~~~~~-----~~~~~~~--~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEHNTNQVVKLLAGST-----TSTVLPF--TGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp EEEECTTCCEEEEETTTSCEEEECTTCS-----CCEECCC--CSCSCEEEEEECTTCCEEEEEGGG
T ss_pred EEEECCCCCEEEEECCCCcEEEEcCCCC-----cceeecc--CCCCCceeEEECCCCCEEEEECCC
Confidence 9999999999999999999999998754 2222221 234679999999999999998543
No 30
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.81 E-value=1e-17 Score=155.86 Aligned_cols=224 Identities=16% Similarity=0.111 Sum_probs=155.8
Q ss_pred EEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEE
Q 020019 51 KWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYD 130 (332)
Q Consensus 51 a~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d 130 (332)
+.+++..++++. ...|.++++++... + .+.. .. ..|.||++|+.+++||+++.. ..+|++++
T Consensus 40 ~~~~~~~ll~~~--~~~I~~i~~~g~~~-----~--~~~~--~~--~~~~~l~~d~~~~~ly~~D~~-----~~~I~r~~ 101 (349)
T 3v64_C 40 ALGPEPVLLFAN--RIDIRQVLPHRSEY-----T--LLLN--NL--ENAIALDFHHRRELVFWSDVT-----LDRILRAN 101 (349)
T ss_dssp ESSSCCEEEEEC--BSCEEEECTTSCCE-----E--EEEC--SC--SCEEEEEEETTTTEEEEEETT-----TTEEEEEE
T ss_pred ccccCceeEeec--ccceEEEeCCCCee-----E--Eeec--CC--CceEEEEEeccccEEEEEecc-----CCceEEEe
Confidence 344444444433 35799999875542 2 2332 22 368999999877999999863 45799999
Q ss_pred CCCCcEEEEEecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEc
Q 020019 131 LSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYH 209 (332)
Q Consensus 131 ~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~ 209 (332)
++++....... .+...|.++++|+ +|+||++|...+.|++++.+|+....+... .+..|+||+++
T Consensus 102 ~~g~~~~~~~~-----~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~---------~l~~P~~iavd 167 (349)
T 3v64_C 102 LNGSNVEEVVS-----TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ---------SLEKPRAIALH 167 (349)
T ss_dssp TTSCSCEEEEC-----SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECT---------TCSCEEEEEEE
T ss_pred cCCCCceEEEe-----CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeC---------CCCCcceEEEe
Confidence 98765443322 1246789999997 478999999999999999998754433222 23468999999
Q ss_pred cCc-eEEEEeCCC-CeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC-CCeEEEEeCCceE-EEEcCCCceEEEE
Q 020019 210 PDG-FLIVIHTFS-GNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS-PTKLVVAGNPSAR-LVESSDGWETAAV 285 (332)
Q Consensus 210 ~dG-~Lyva~~~~-~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~~~~~~-~v~~~dg~~~~~~ 285 (332)
|++ .||+++... ++|+|+++++. ..+.+ .. ..+..|.||++|+ +++||+++....+ .+...+|.....+
T Consensus 168 p~~g~ly~td~~~~~~I~r~~~dG~-----~~~~~-~~-~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~ 240 (349)
T 3v64_C 168 PMEGTIYWTDWGNTPRIEASSMDGS-----GRRII-AD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 240 (349)
T ss_dssp TTTTEEEEEECSSSCEEEEEETTSC-----SCEES-CC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cCcCeEEEeccCCCCEEEEEeCCCC-----CcEEE-EE-CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEE
Confidence 865 999999998 99999999854 22222 22 3467899999996 6899999854322 2344566222222
Q ss_pred EeeecCCCcccceEEEEECCeEEEEEecCccc
Q 020019 286 VAKFSGPVHRLATAATVKDGRVYLNHMLGFGY 317 (332)
Q Consensus 286 ~~~~~~~~~~~pt~va~~~g~lyv~~~~g~~~ 317 (332)
.. ..+..|.++++.+++||++++....+
T Consensus 241 ~~----~~~~~P~giav~~~~ly~td~~~~~V 268 (349)
T 3v64_C 241 IS----QGLPHPFAITVFEDSLYWTDWHTKSI 268 (349)
T ss_dssp EC----SSCSSEEEEEEETTEEEEEETTTTEE
T ss_pred Ee----CCCCCceEEEEECCEEEEecCCCCeE
Confidence 22 23678999999999999987766544
No 31
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.81 E-value=1.8e-17 Score=156.21 Aligned_cols=224 Identities=16% Similarity=0.107 Sum_probs=156.3
Q ss_pred EEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEE
Q 020019 51 KWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYD 130 (332)
Q Consensus 51 a~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d 130 (332)
+.++++.++++. ...|+++++++... + .+.. .. ..|.||++|+.+++||+++.. ..+|++++
T Consensus 83 ~~~~~~~l~~~~--~~~I~~i~~~~~~~-----~--~~~~--~~--~~~~gl~~d~~~~~ly~~D~~-----~~~I~r~~ 144 (386)
T 3v65_B 83 ALGPEPVLLFAN--RIDIRQVLPHRSEY-----T--LLLN--NL--ENAIALDFHHRRELVFWSDVT-----LDRILRAN 144 (386)
T ss_dssp ECSSCCEEEEEC--BSCEEEECTTSCCC-----E--EEEC--SC--SCEEEEEEETTTTEEEEEETT-----TTEEEEEE
T ss_pred CccccceeEeec--CccceeeccCCCcE-----E--EEec--CC--CccEEEEEecCCCeEEEEeCC-----CCcEEEEe
Confidence 334444333332 46899999886552 2 2332 22 378999999877999999863 46799999
Q ss_pred CCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEc
Q 020019 131 LSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYH 209 (332)
Q Consensus 131 ~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~ 209 (332)
++++....... .+...|+++++|+. |+||++|+..++|++++++|+....+... .+..|+||+++
T Consensus 145 ~~g~~~~~~~~-----~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~---------~l~~P~giavd 210 (386)
T 3v65_B 145 LNGSNVEEVVS-----TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ---------SLEKPRAIALH 210 (386)
T ss_dssp TTSCCEEEEEC-----SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECS---------SCSCEEEEEEE
T ss_pred cCCCCcEEEEe-----CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecC---------CCCCCcEEEEE
Confidence 98665443332 12467899999974 78999999999999999998754333222 23468999999
Q ss_pred cCc-eEEEEeCCC-CeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC-CCeEEEEeCCceE-EEEcCCCceEEEE
Q 020019 210 PDG-FLIVIHTFS-GNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS-PTKLVVAGNPSAR-LVESSDGWETAAV 285 (332)
Q Consensus 210 ~dG-~Lyva~~~~-~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~~~~~~-~v~~~dg~~~~~~ 285 (332)
|++ .||+++... ++|+|+++++. ..+.+. . ..+..|.||++|+ +++||+++....+ .+...+|.....+
T Consensus 211 p~~g~ly~td~~~~~~I~r~~~dG~-----~~~~~~-~-~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 211 PMEGTIYWTDWGNTPRIEASSMDGS-----GRRIIA-D-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 283 (386)
T ss_dssp TTTTEEEEEECSSSCEEEEEETTSC-----SCEEEE-C-SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEE
T ss_pred cCCCeEEEeccCCCCEEEEEeCCCC-----CcEEEE-E-CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEE
Confidence 865 999999988 99999999854 233232 2 2467899999995 5899999854322 2345566222223
Q ss_pred EeeecCCCcccceEEEEECCeEEEEEecCccc
Q 020019 286 VAKFSGPVHRLATAATVKDGRVYLNHMLGFGY 317 (332)
Q Consensus 286 ~~~~~~~~~~~pt~va~~~g~lyv~~~~g~~~ 317 (332)
.. ..+..|.++++.+++||++++....+
T Consensus 284 ~~----~~~~~P~giav~~~~ly~td~~~~~V 311 (386)
T 3v65_B 284 IS----QGLPHPFAITVFEDSLYWTDWHTKSI 311 (386)
T ss_dssp EC----SSCSSEEEEEEETTEEEEEETTTTEE
T ss_pred EE----CCCCCceEEEEECCEEEEeeCCCCeE
Confidence 22 23678999999999999988765544
No 32
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.80 E-value=3.9e-17 Score=145.45 Aligned_cols=223 Identities=13% Similarity=0.097 Sum_probs=150.7
Q ss_pred EEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEE
Q 020019 58 RFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRL 137 (332)
Q Consensus 58 ~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~ 137 (332)
+|+++ .++|++++.++.... ..+...+...|. ..|.|+++|+++++||+++.. .+.|.++|++++...
T Consensus 4 l~~~~--~~~I~~~~~~g~~~~--~~~~~~~~~~~~---~~~~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~ 71 (267)
T 1npe_A 4 LLFAQ--TGKIERLPLERNTMK--KTEAKAFLHIPA---KVIIGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPT 71 (267)
T ss_dssp EEEEE--EEEEEEEEESSSCBC--GGGCEEEEEEEE---EEEEEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCE
T ss_pred EEEEc--CCeEEEEEecCcccc--cccceeeecCCC---CcEEEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcE
Confidence 44444 358999998754320 000011222221 268999999976899999863 467999999765543
Q ss_pred EEEecCCCCCCCCCccceEECCC-CcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccC-ceEE
Q 020019 138 FLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPD-GFLI 215 (332)
Q Consensus 138 ~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~d-G~Ly 215 (332)
.... .+...|+++++|++ |++|++|...++|++++.+|+....+... ....|+||+++++ |+||
T Consensus 72 ~~~~-----~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~---------~~~~P~~i~vd~~~g~ly 137 (267)
T 1npe_A 72 TIIR-----QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT---------GLVNPRGIVTDPVRGNLY 137 (267)
T ss_dssp EEEC-----TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---------SCSSEEEEEEETTTTEEE
T ss_pred EEEE-----CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC---------CCCCccEEEEeeCCCEEE
Confidence 3221 12468999999996 68999999999999999998643322111 2346899999996 5999
Q ss_pred EEeCC--CCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCC-CeEEEEeCCce-EEEEcCCCceEEEEEeeecC
Q 020019 216 VIHTF--SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSP-TKLVVAGNPSA-RLVESSDGWETAAVVAKFSG 291 (332)
Q Consensus 216 va~~~--~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~d-G~l~va~~~~~-~~v~~~dg~~~~~~~~~~~~ 291 (332)
+++.. +++|++++++.. ..+.+.. ..+..|.||+++++ ++||+++.... ..++..++.....+ +.
T Consensus 138 v~~~~~~~~~I~~~~~dg~-----~~~~~~~--~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~---~~- 206 (267)
T 1npe_A 138 WTDWNRDNPKIETSHMDGT-----NRRILAQ--DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV---LE- 206 (267)
T ss_dssp EEECCSSSCEEEEEETTSC-----CCEEEEC--TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE---EE-
T ss_pred EEECCCCCcEEEEEecCCC-----CcEEEEE--CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE---ec-
Confidence 99987 689999998743 2232322 24568999999986 78999985432 23445555222222 22
Q ss_pred CCcccceEEEEECCeEEEEEecCcccc
Q 020019 292 PVHRLATAATVKDGRVYLNHMLGFGYP 318 (332)
Q Consensus 292 ~~~~~pt~va~~~g~lyv~~~~g~~~~ 318 (332)
.+..|.++++.+++||++++....+.
T Consensus 207 -~~~~P~gi~~d~~~lyva~~~~~~v~ 232 (267)
T 1npe_A 207 -GLQYPFAVTSYGKNLYYTDWKTNSVI 232 (267)
T ss_dssp -CCCSEEEEEEETTEEEEEETTTTEEE
T ss_pred -CCCCceEEEEeCCEEEEEECCCCeEE
Confidence 35679999999999999887665543
No 33
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=6.7e-18 Score=155.18 Aligned_cols=207 Identities=10% Similarity=0.041 Sum_probs=142.9
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEec--ccCc---CCCccceEEEeCCCCeEEEEEeCcCC
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVK--DLEL---TGNGSLGLVLDHPRNRLLVVAADVFG 120 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~gi~vd~~~g~l~v~~~~~~~ 120 (332)
.|.+++++++|++|+++...++|+++++++.... .. .+-. .++. .-..|.+|++++++|++||++..
T Consensus 92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~---~~--~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~--- 163 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGP---LL--ILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY--- 163 (329)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCC---SE--EESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS---
T ss_pred CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEE---EE--EecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC---
Confidence 8999999999999988887899999998754210 11 2211 0111 01369999999945999999851
Q ss_pred CccceEEEEECCCCcEEEEEecCCCC-----CCCCCccceEECCC-CcEEEEeCCCCeEEEEcCC-CceEEEecCCCCC-
Q 020019 121 NKYSAVAAYDLSTWNRLFLTQLSGPS-----DGKSCADDVTVDAE-GNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFT- 192 (332)
Q Consensus 121 ~~~~~l~~~d~~~g~~~~~~~l~~~~-----~~~~~~ndiavd~d-G~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~- 192 (332)
...+|.+||. +|+....+...+.. .....|+++++|++ |++||+|+.+++|.+++++ |+....+..+...
T Consensus 164 -~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~ 241 (329)
T 3fvz_A 164 -CNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGR 241 (329)
T ss_dssp -SCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTT
T ss_pred -CCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCC
Confidence 1457999995 56765544322111 11256999999998 8999999999999999998 8876655332221
Q ss_pred CcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC
Q 020019 193 PKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP 269 (332)
Q Consensus 193 ~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~ 269 (332)
.+. .-...| |++++.+|.+|+++...++|+.+++.+++ .+..+......+..|.+|+++++|+|||++..
T Consensus 242 ~~~--~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~----~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 242 NVF--AISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGE----IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAH 311 (329)
T ss_dssp CEE--EEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCC----EEEEECCSSSCCSSEEEEEECTTSEEEEEESS
T ss_pred Ccc--eeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCe----EEEEEcCCCCccCCeeEEEECCCCCEEEEECC
Confidence 110 001123 56666688888888888899999988773 44444322135678999999999999999843
No 34
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.79 E-value=2.9e-17 Score=151.08 Aligned_cols=217 Identities=9% Similarity=-0.004 Sum_probs=151.2
Q ss_pred CccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcC--CCccceEEEeCCCCeEEEEEeCcCCC
Q 020019 44 SFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELT--GNGSLGLVLDHPRNRLLVVAADVFGN 121 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~gi~vd~~~g~l~v~~~~~~~~ 121 (332)
+..|++++++++|++|+++..+++|+++|+.+++. .. .+. -.... ...|.+|+++ +++|||++.+.
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~----~~--~i~-~g~~~~~~~~p~~i~~~--~~~lyv~~~~~--- 150 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI----TG--YIE-CPDMDMESGSTEQMVQY--GKYVYVNCWSY--- 150 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE----EE--EEE-CTTCCTTTCBCCCEEEE--TTEEEEEECTT---
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE----EE--EEE-cCCccccCCCcceEEEE--CCEEEEEcCCC---
Confidence 45899999988898887776789999999987652 11 221 11100 0268899994 48999997521
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCC----------CeEEEEcCC-CceEEEecCCC
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTG----------SKIWKVGVK-GEFLSIISSPL 190 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~----------~~I~~v~~~-g~~~~~~~~~~ 190 (332)
.+.|.+||++++++...+.. ...|++++++++|++|+++... +.|+++|++ ++....+..+.
T Consensus 151 -~~~v~viD~~t~~~~~~i~~------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~ 223 (328)
T 3dsm_A 151 -QNRILKIDTETDKVVDELTI------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL 223 (328)
T ss_dssp -CCEEEEEETTTTEEEEEEEC------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT
T ss_pred -CCEEEEEECCCCeEEEEEEc------CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC
Confidence 35799999999988776654 2468999999999999998875 899999987 55443332211
Q ss_pred CCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC-CCeEEEEe-
Q 020019 191 FTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS-PTKLVVAG- 267 (332)
Q Consensus 191 ~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~- 267 (332)
...|++|+++||| +||+++. +|+++|+++++.. .... .. .....|+||++++ +|+|||++
T Consensus 224 ---------g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~--~~~~--~~-~~~~~p~gi~vdp~~g~lyva~~ 286 (328)
T 3dsm_A 224 ---------GDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVP--VRPF--LE-FRDTKYYGLTVNPNNGEVYVADA 286 (328)
T ss_dssp ---------TCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCC--SSCS--BC-CCSSCEEEEEECTTTCCEEEEEC
T ss_pred ---------CCCceeEEEecCCCEEEEEcc---EEEEEECCCCcee--eeee--ec-CCCCceEEEEEcCCCCeEEEEcc
Confidence 1358899999988 9999876 8999999877421 0110 11 1136799999998 79999998
Q ss_pred ---CCce-EEEEcCCCceEEEEEeeecCCCcccceEEEE
Q 020019 268 ---NPSA-RLVESSDGWETAAVVAKFSGPVHRLATAATV 302 (332)
Q Consensus 268 ---~~~~-~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~ 302 (332)
.... ..++.++| +++..+.. ...|.++++
T Consensus 287 ~~y~~~~~V~v~d~~g----~~~~~i~~--G~~P~~~~~ 319 (328)
T 3dsm_A 287 IDYQQQGIVYRYSPQG----KLIDEFYV--GIIPGAFCW 319 (328)
T ss_dssp TTSSSEEEEEEECTTC----CEEEEEEE--EESEEEEEE
T ss_pred cccccCCEEEEECCCC----CEEEEEEe--ccCcceEEE
Confidence 4332 34566667 33333331 356788877
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=3e-17 Score=146.88 Aligned_cols=191 Identities=14% Similarity=0.120 Sum_probs=140.6
Q ss_pred ccccceEE-cCCCCEEEEEec-CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 45 FFRECAKW-DDSGRRFIVSFL-DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 45 ~~pegia~-d~~g~~~~~~~~-~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
..|.++++ +++|++|+++.. +++|++++.+ ++. .. .+. ... ...|.+|+++++ |++|+++..
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g~~----~~--~~~-~~~--~~~~~~i~~~~~-g~l~v~~~~----- 140 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQF----VR--KFG-ATI--LQHPRGVTVDNK-GRIIVVECK----- 140 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEECTT-SCE----EE--EEC-TTT--CSCEEEEEECTT-SCEEEEETT-----
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-CcE----EE--Eec-Ccc--CCCceEEEEeCC-CCEEEEECC-----
Confidence 37899999 588988888853 7899999964 441 11 221 111 137899999996 899999853
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
.+.|.+||.+ ++....+... .....|+++++|++|++|++++..+.|++++++|+....+.... .+..
T Consensus 141 ~~~i~~~~~~-g~~~~~~~~~---~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g--------~~~~ 208 (286)
T 1q7f_A 141 VMRVIIFDQN-GNVLHKFGCS---KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEG--------ITNY 208 (286)
T ss_dssp TTEEEEECTT-SCEEEEEECT---TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTT--------TSCS
T ss_pred CCEEEEEcCC-CCEEEEeCCC---CccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCC--------ccCC
Confidence 4579999975 5555444331 12467999999999999999999999999999988654432211 1246
Q ss_pred cCeEEEccCceEEEEeCCCC-eEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC
Q 020019 203 LNGIVYHPDGFLIVIHTFSG-NLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP 269 (332)
Q Consensus 203 ~nGi~~~~dG~Lyva~~~~~-~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~ 269 (332)
|.+|+++++|+||+++..++ +|.+++.++. .+..+... .....|.+++++++|+||+++..
T Consensus 209 p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~-----~~~~~~~~-~~~~~~~~i~~~~~g~l~vs~~~ 270 (286)
T 1q7f_A 209 PIGVGINSNGEILIADNHNNFNLTIFTQDGQ-----LISALESK-VKHAQCFDVALMDDGSVVLASKD 270 (286)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECTTSC-----EEEEEEES-SCCSCEEEEEEETTTEEEEEETT
T ss_pred CcEEEECCCCCEEEEeCCCCEEEEEECCCCC-----EEEEEccc-CCCCcceeEEECCCCcEEEECCC
Confidence 78999999999999999886 9999997643 45555543 23356889999999999999743
No 36
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=1.3e-16 Score=146.67 Aligned_cols=226 Identities=12% Similarity=0.045 Sum_probs=159.9
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
..|++++++. +++|++....+.|.++|+.+++. .. ++ . . +..|.+|+++++ |++|+++.. .+
T Consensus 44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~----~~--~i-~--~--~~~p~~i~~~~~-g~lyv~~~~-----~~ 105 (328)
T 3dsm_A 44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKE----VG--RI-T--G--FTSPRYIHFLSD-EKAYVTQIW-----DY 105 (328)
T ss_dssp SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCE----EE--EE-E--C--CSSEEEEEEEET-TEEEEEEBS-----CS
T ss_pred ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEE----EE--Ec-C--C--CCCCcEEEEeCC-CeEEEEECC-----CC
Confidence 3678898864 67888777789999999987762 22 23 1 1 237899999886 899999842 35
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC-CCeEEEEcCC-CceEEEecCCCCCCcccccCccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT-GSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~-~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
.|.+||++++++...+.+.........|.++++ .++.+|+++++ .+.|.++|+. ++....+.. ...
T Consensus 106 ~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-----------g~~ 173 (328)
T 3dsm_A 106 RIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-----------GIQ 173 (328)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-----------SSC
T ss_pred eEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-----------CCC
Confidence 799999999988776665211111237899999 46789999984 8899999987 454433321 135
Q ss_pred cCeEEEccCceEEEEeCCC----------CeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCC-CeEEEEeCCce
Q 020019 203 LNGIVYHPDGFLIVIHTFS----------GNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSP-TKLVVAGNPSA 271 (332)
Q Consensus 203 ~nGi~~~~dG~Lyva~~~~----------~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~d-G~l~va~~~~~ 271 (332)
|+++++++||.+|++.... ++|++||+++++ ....+.++ ....|.+|+++++ +.||+++. ..
T Consensus 174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~----v~~~~~~~--~g~~p~~la~~~d~~~lyv~~~-~v 246 (328)
T 3dsm_A 174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT----VEKQFKFK--LGDWPSEVQLNGTRDTLYWINN-DI 246 (328)
T ss_dssp BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE----EEEEEECC--TTCCCEEEEECTTSCEEEEESS-SE
T ss_pred ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe----EEEEEecC--CCCCceeEEEecCCCEEEEEcc-EE
Confidence 7899999999999998875 899999998772 44455554 1247999999986 56888876 44
Q ss_pred EEEEcCCCceEEEEEe-eecCCCcccceEEEE--ECCeEEEEE
Q 020019 272 RLVESSDGWETAAVVA-KFSGPVHRLATAATV--KDGRVYLNH 311 (332)
Q Consensus 272 ~~v~~~dg~~~~~~~~-~~~~~~~~~pt~va~--~~g~lyv~~ 311 (332)
..+...++ + +.. .+.......|.++++ .+++|||++
T Consensus 247 ~~~d~~t~-~---~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 247 WRMPVEAD-R---VPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EEEETTCS-S---CCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred EEEECCCC-c---eeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 54455555 2 221 111111467999999 389999988
No 37
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.78 E-value=2.7e-16 Score=144.15 Aligned_cols=214 Identities=14% Similarity=0.111 Sum_probs=147.3
Q ss_pred CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCC----CcEEEEE
Q 020019 65 DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLST----WNRLFLT 140 (332)
Q Consensus 65 ~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~----g~~~~~~ 140 (332)
...|.+++.++.+. . .++ +.+ ..|.|+++|+++++||+++.. ...|+++++++ ......
T Consensus 9 ~~~I~~i~~~~~~~-----~--~~~--~~~--~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~- 71 (316)
T 1ijq_A 9 RHEVRKMTLDRSEY-----T--SLI--PNL--RNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTV- 71 (316)
T ss_dssp BSSEEEEETTSCCC-----E--EEE--CSC--SSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEE-
T ss_pred CCeEEEEECCCcce-----E--ehh--cCC--CceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEE-
Confidence 36799999886653 1 233 222 378999999877899999864 46799999875 122221
Q ss_pred ecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEe
Q 020019 141 QLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIH 218 (332)
Q Consensus 141 ~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~ 218 (332)
+. .+...|.++++|+ +|+||++|...+.|.+++++|+....+... .+..|+||+++|++ .||+++
T Consensus 72 -~~---~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~---------~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 72 -IS---RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---------NGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp -EC---SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC---------TTCCEEEEEEETTTTEEEEEE
T ss_pred -Ee---CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC---------CCCCcceEEeCCCCCEEEEEc
Confidence 21 1246789999997 578999999999999999998754433221 23468899999855 999999
Q ss_pred CCC-CeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC-CCeEEEEeCCce-EEEEcCCCceEEEEEeeecCCCcc
Q 020019 219 TFS-GNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS-PTKLVVAGNPSA-RLVESSDGWETAAVVAKFSGPVHR 295 (332)
Q Consensus 219 ~~~-~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~~~~~-~~v~~~dg~~~~~~~~~~~~~~~~ 295 (332)
... ++|+++++++. ..+.+. . ..+..|.||++|+ +++||+++.... ..+...+|.....+... ...+.
T Consensus 139 ~~~~~~I~~~~~dG~-----~~~~~~-~-~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~--~~~~~ 209 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGV-----DIYSLV-T-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED--EKRLA 209 (316)
T ss_dssp CSSSCEEEEEETTSC-----CEEEEE-C-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC--TTTTS
T ss_pred cCCCCeEEEEcCCCC-----CeEEEE-E-CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeec--CCccC
Confidence 986 89999999843 233332 2 2567899999996 489999985432 22344556233233221 13467
Q ss_pred cceEEEEECCeEEEEEecCccc
Q 020019 296 LATAATVKDGRVYLNHMLGFGY 317 (332)
Q Consensus 296 ~pt~va~~~g~lyv~~~~g~~~ 317 (332)
.|.++++.+++||++++....+
T Consensus 210 ~P~giav~~~~ly~~d~~~~~V 231 (316)
T 1ijq_A 210 HPFSLAVFEDKVFWTDIINEAI 231 (316)
T ss_dssp SEEEEEEETTEEEEEETTTTEE
T ss_pred CcEEEEEECCEEEEEECCCCeE
Confidence 8999999889999988665544
No 38
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.78 E-value=1.4e-16 Score=162.42 Aligned_cols=223 Identities=16% Similarity=0.090 Sum_probs=151.2
Q ss_pred CccccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 44 SFFRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 44 ~~~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
...|.+++++.. +++|+++...++|++++.++.... .+...++. ..+ ..|.||++|...++||+++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~---~~~~~vi~-~~l--~~P~GLAvD~~~~~LY~tD~~----- 491 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV---SSYDTVIS-RDI--QAPDGLAVDWIHSNIYWTDSV----- 491 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEEC-SSC--SCCCEEEEETTTTEEEEEETT-----
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCC---cceeEEEe-cCC--CCcceeeeeecCCcEEEEecC-----
Confidence 347899999984 667777787899999998753210 01112332 122 379999999876799999864
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCCC-CeEEEEcCCCceEEEecCCCCCCcccccCc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVTG-SKIWKVGVKGEFLSIISSPLFTPKEWYKNL 200 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~~-~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~ 200 (332)
...|.+++++.......+. .....|++|++|+. |.||++|++. ++|++++++|+....+... .+
T Consensus 492 ~~~I~v~~ldG~~~~~l~~-----~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~---------~l 557 (791)
T 3m0c_C 492 LGTVSVADTKGVKRKTLFR-----ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---------NI 557 (791)
T ss_dssp TTEEEEEETTSSSEEEEEE-----CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---------SC
T ss_pred CCeEEEEeCCCCeEEEEEe-----CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC---------CC
Confidence 4679999997554433332 12467999999996 7899999986 8999999999865544332 23
Q ss_pred cccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc--eEEEEcC
Q 020019 201 VGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS--ARLVESS 277 (332)
Q Consensus 201 ~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~--~~~v~~~ 277 (332)
..|+||++++.+ +|||++...++|+++++++. ..+.+...+..+..|.||+++. ++||+++... ++.+...
T Consensus 558 ~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~-----~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-----NRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-----SCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEeCCCCcEEEEecCCC-----ceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCC
Confidence 568999999765 99999999999999999854 2333322223567889999975 5999998543 3333345
Q ss_pred CCceEEEEEeeecCCCcccceEEEE
Q 020019 278 DGWETAAVVAKFSGPVHRLATAATV 302 (332)
Q Consensus 278 dg~~~~~~~~~~~~~~~~~pt~va~ 302 (332)
+|.....+.. .+..|.++++
T Consensus 632 tG~~~~~l~~-----~l~~P~~i~v 651 (791)
T 3m0c_C 632 TGSDVNLLAE-----NLLSPEDMVL 651 (791)
T ss_dssp TCCCCEEEEC-----SCSCCCCEEE
T ss_pred CCcceEEeec-----CCCCceeEee
Confidence 6633333322 2445666665
No 39
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.78 E-value=9.2e-17 Score=149.58 Aligned_cols=255 Identities=17% Similarity=0.138 Sum_probs=153.6
Q ss_pred EEecCCc-cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEeccc-CcC-CCccceEEEeCC---CCeEE
Q 020019 39 HYHSSSF-FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDL-ELT-GNGSLGLVLDHP---RNRLL 112 (332)
Q Consensus 39 ~~~~~~~-~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~gi~vd~~---~g~l~ 112 (332)
+....++ .|++++++++|++|++... |+|++++ + ++. + .+...+ ... ..+|.||+++++ ++.||
T Consensus 24 ~~va~~l~~P~~ia~~pdG~l~V~e~~-g~I~~i~-~-g~~-----~--~~~~~~v~~~g~~~p~gia~~pdf~~~g~lY 93 (352)
T 2ism_A 24 EEVVGGLEVPWALAFLPDGGMLIAERP-GRIRLFR-E-GRL-----S--TYAELSVYHRGESGLLGLALHPRFPQEPYVY 93 (352)
T ss_dssp EEEECCCSCEEEEEECTTSCEEEEETT-TEEEEEE-T-TEE-----E--EEEECCCCCSTTCSEEEEEECTTTTTSCEEE
T ss_pred EEEECCCCCceEEEEcCCCeEEEEeCC-CeEEEEE-C-CCc-----c--EeecceEeecCCCCceeEEECCCCCCCCEEE
Confidence 3333444 8999999999998888764 9999998 3 431 1 122111 011 247999999996 68999
Q ss_pred EEEeCcCCCccceEEEEECCCCcEE---EEE-ecCCCCCCCCCccceEECCCCcEEEEeC-------------CCCeEEE
Q 020019 113 VVAADVFGNKYSAVAAYDLSTWNRL---FLT-QLSGPSDGKSCADDVTVDAEGNAYVTDV-------------TGSKIWK 175 (332)
Q Consensus 113 v~~~~~~~~~~~~l~~~d~~~g~~~---~~~-~l~~~~~~~~~~ndiavd~dG~lyvtd~-------------~~~~I~~ 175 (332)
|++.........+|.+|+.+.++.. ..+ .++......+.++++++++||+|||++. ..++|+|
T Consensus 94 v~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~r 173 (352)
T 2ism_A 94 AYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILR 173 (352)
T ss_dssp EEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEE
T ss_pred EEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEE
Confidence 9986311001257889988754321 122 2421012346889999999999999963 2479999
Q ss_pred EcCCCceEEEecCCCCC------CcccccCccccCeEEEcc-CceEEEEeCCCCe--------EEEEeCCCC----CCcc
Q 020019 176 VGVKGEFLSIISSPLFT------PKEWYKNLVGLNGIVYHP-DGFLIVIHTFSGN--------LFKIDIVDG----VGEG 236 (332)
Q Consensus 176 v~~~g~~~~~~~~~~~~------~p~~~~~~~~~nGi~~~~-dG~Lyva~~~~~~--------i~~id~~~~----~~~~ 236 (332)
++++|+... .++ |. ......++..|+||++++ +|+||+++...+. |.++..... ...+
T Consensus 174 i~~dG~~p~--~np-f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g 250 (352)
T 2ism_A 174 LTPEGEPAP--GNP-FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVG 250 (352)
T ss_dssp ECTTSSBCT--TCT-TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCS
T ss_pred EcCCCCCCC--CCc-ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccC
Confidence 999985321 111 10 011123456799999999 6799999998776 666654320 0000
Q ss_pred --------ceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCceEE--EEcC-CCce--EEEEEeeecCCCcccceEEEE-
Q 020019 237 --------EEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSARL--VESS-DGWE--TAAVVAKFSGPVHRLATAATV- 302 (332)
Q Consensus 237 --------~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~~~--v~~~-dg~~--~~~~~~~~~~~~~~~pt~va~- 302 (332)
.++ +... +...|.||++ .+|++|+++....++ +... ++.. ..+....+. ....|+++++
T Consensus 251 ~~~~~~~~~p~--~~~~--~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~--~~~rp~~v~~~ 323 (352)
T 2ism_A 251 RGNDPRYRDPL--YFWP--QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS--GFGRLREVQVG 323 (352)
T ss_dssp CCCCTTSCCCS--EECT--TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE--SSCCEEEEEEC
T ss_pred CCCCCCCcCCe--EecC--CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc--cCCCeeEEEEC
Confidence 011 1111 2346899999 578999998543332 2222 2211 111222221 2456899999
Q ss_pred ECCeEEEEEec
Q 020019 303 KDGRVYLNHML 313 (332)
Q Consensus 303 ~~g~lyv~~~~ 313 (332)
.+|.|||+..-
T Consensus 324 pdG~lyv~~~~ 334 (352)
T 2ism_A 324 PDGALYVTTSN 334 (352)
T ss_dssp TTSCEEEEECS
T ss_pred CCCcEEEEEeC
Confidence 78999997653
No 40
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=1.7e-16 Score=152.96 Aligned_cols=246 Identities=9% Similarity=0.030 Sum_probs=158.7
Q ss_pred cccceEEcC--CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEE-------eCCCCeEEEEEe
Q 020019 46 FRECAKWDD--SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVL-------DHPRNRLLVVAA 116 (332)
Q Consensus 46 ~pegia~d~--~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v-------d~~~g~l~v~~~ 116 (332)
.|.++++|| ++++|++....++|+++|++++.. . ++.......-+.|.+|++ +++.++||+++.
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v-----~--~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~ 212 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRML-----S--SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAID 212 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEE-----E--EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEEC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEE-----E--EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeC
Confidence 689999997 377887776567899999886652 2 333221111137999999 997445999986
Q ss_pred CcCC-CccceEEEEECCC-CcEEE---EEecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCC-------CceE
Q 020019 117 DVFG-NKYSAVAAYDLST-WNRLF---LTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVK-------GEFL 183 (332)
Q Consensus 117 ~~~~-~~~~~l~~~d~~~-g~~~~---~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~-------g~~~ 183 (332)
.... .....++.++.+. |++.. ...+. ....|++++++| +|.||+++...++|++++++ ++..
T Consensus 213 ~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~----~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~ 288 (496)
T 3kya_A 213 YDGKGDESPSVYIIKRNADGTFDDRSDIQLIA----AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGS 288 (496)
T ss_dssp CCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE----EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCC
T ss_pred CCCCcccCceEEEEecCCCCceeecccceeec----cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCcee
Confidence 4210 0123477787544 33320 01110 124789999999 57899999999999999986 2221
Q ss_pred -------------EEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEec-C--
Q 020019 184 -------------SIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA-G-- 246 (332)
Q Consensus 184 -------------~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~-g-- 246 (332)
.+... +....|.+|+++|+| .|||+++.+++|+|++++.....-.....+.-. |
T Consensus 289 ~tp~~~~~~g~~~~l~~~---------~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~ 359 (496)
T 3kya_A 289 WDPIVKNNPNTFKQLFTI---------ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQS 359 (496)
T ss_dssp CCCBGGGCTTTEEEEEEC---------SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBC
T ss_pred ecccccccccccceeEec---------CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCC
Confidence 11111 112357899999999 699999999999998876321000001222211 1
Q ss_pred ---------CCCCCCC-eEEEe-------CCCeEEEEe--CCceEEEEcCCCceEEEEEeeec-------------C---
Q 020019 247 ---------GPLSFGD-GLELL-------SPTKLVVAG--NPSARLVESSDGWETAAVVAKFS-------------G--- 291 (332)
Q Consensus 247 ---------~~~~~pd-Gi~~~-------~dG~l~va~--~~~~~~v~~~dg~~~~~~~~~~~-------------~--- 291 (332)
..+..|. |++++ ++|+|||++ |+.++ ++.++| ...++..... .
T Consensus 360 G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr-~i~~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~ 437 (496)
T 3kya_A 360 GYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVR-KVTPEG-IVSTYAGRGASTSLADGNQWGTDDGDL 437 (496)
T ss_dssp CCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEE-EECTTC-BEEEEEESCTTHHHHHSCSCCCCCEET
T ss_pred cccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEE-EEeCCC-CEEEEecccccccccCccccccCCCCc
Confidence 2456799 88887 689999997 44445 355788 5556654310 1
Q ss_pred ---CCcccceEEEE-E-CCeEEEEEec
Q 020019 292 ---PVHRLATAATV-K-DGRVYLNHML 313 (332)
Q Consensus 292 ---~~~~~pt~va~-~-~g~lyv~~~~ 313 (332)
.+|..|.++++ . ++.|||+...
T Consensus 438 ~~~a~f~~P~gIavd~~~g~lyVaD~~ 464 (496)
T 3kya_A 438 REVARFRDVSGLVYDDVKEMFYVHDQV 464 (496)
T ss_dssp TTTCCCSSEEEEEEETTTTEEEEEETT
T ss_pred hhhhhcCCCcEEEEECCCCEEEEEeCC
Confidence 14788999999 4 3999997643
No 41
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.77 E-value=1.2e-16 Score=159.61 Aligned_cols=195 Identities=15% Similarity=0.134 Sum_probs=143.6
Q ss_pred cccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
.|.++++|++ +++|+++...++|+++++++... + .+.. .+. ..|.||++|...++||+++.. ..
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-----~--~v~~-~g~--~~P~GlAvD~~~~~LY~tD~~-----~~ 102 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-----E--HVVE-FGL--DYPEGMAVDWLGKNLYWADTG-----TN 102 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----E--EEEC-SSC--SCCCEEEEETTTTEEEEEETT-----TT
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-----E--EEEe-CCC--CCcceEEEEeCCCEEEEEECC-----CC
Confidence 7889999986 55677778889999999875542 2 3442 232 379999999877999999874 46
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECC-CCcEEEEeCC-CCeEEEEcCCCceEEEecCCCCCCcccccCccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVT-GSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~-~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
.|.+++++......... .....|++|++|| +|.||+||++ .++|++++++|+....+.. .+..
T Consensus 103 ~I~v~~~dG~~~~~l~~-----~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~----------~~~~ 167 (628)
T 4a0p_A 103 RIEVSKLDGQHRQVLVW-----KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP----------NVGR 167 (628)
T ss_dssp EEEEEETTSTTCEEEEC-----SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC----------SCSS
T ss_pred EEEEEecCCCcEEEEEe-----CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC----------CCCC
Confidence 79999987544332221 1246799999998 5899999987 7899999999875443322 2346
Q ss_pred cCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc--eEEEEcCCC
Q 020019 203 LNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS--ARLVESSDG 279 (332)
Q Consensus 203 ~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~--~~~v~~~dg 279 (332)
|+||++|+++ +|||++..+++|+++++++. ..+.+. ..+..|.||+++. ++||+++... +..+...+|
T Consensus 168 P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~-----~~~v~~---~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 168 ANGLTIDYAKRRLYWTDLDTNLIESSNMLGL-----NREVIA---DDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSC-----SCEEEE---ECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred cceEEEccccCEEEEEECCCCEEEEEcCCCC-----ceEEee---ccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence 8999999976 99999999999999999854 223332 2457899999997 7999998533 333343455
No 42
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.77 E-value=1.9e-16 Score=147.58 Aligned_cols=256 Identities=16% Similarity=0.121 Sum_probs=155.4
Q ss_pred EEEecCCc-cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEeccc-CcC-CCccceEEEeCC---CCeE
Q 020019 38 YHYHSSSF-FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDL-ELT-GNGSLGLVLDHP---RNRL 111 (332)
Q Consensus 38 i~~~~~~~-~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~gi~vd~~---~g~l 111 (332)
++....++ .|++++++++|++|++... |+|++++.+ ++. .+..-+ ... ..++.||+++++ +++|
T Consensus 21 ~~~va~~l~~P~~ia~~pdG~l~V~e~~-g~I~~~d~~-G~~--------~~~~~~v~~~g~~g~~gia~~pdf~~~g~l 90 (354)
T 3a9g_A 21 ISEVASDLEVPWSIAPLGGGRYLVTERP-GRLVLISPS-GKK--------LVASFDVANVGEAGLLGLALHPEFPKKSWV 90 (354)
T ss_dssp EEEEECSCSCEEEEEEEETTEEEEEETT-TEEEEECSS-CEE--------EEEECCCCCSTTCSEEEEEECTTTTTSCEE
T ss_pred EEEEeCCCCCCeEEEEcCCCeEEEEeCC-CEEEEEeCC-Cce--------EeeccceeecCCCceeeEEeCCCCCcCCEE
Confidence 44444455 8999999999998888764 999999754 321 121111 011 137999999996 6899
Q ss_pred EEEEeC--cCCCccceEEEEECCCC--cE---EEEE-ecCCCCCCCCCccceEECCCCcEEEEeC-------------CC
Q 020019 112 LVVAAD--VFGNKYSAVAAYDLSTW--NR---LFLT-QLSGPSDGKSCADDVTVDAEGNAYVTDV-------------TG 170 (332)
Q Consensus 112 ~v~~~~--~~~~~~~~l~~~d~~~g--~~---~~~~-~l~~~~~~~~~~ndiavd~dG~lyvtd~-------------~~ 170 (332)
||+... .......+|.+|+.+.+ +. ...+ .++ ....+.+++|+++|||+|||+.. ..
T Consensus 91 yv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~--~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~ 168 (354)
T 3a9g_A 91 YLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP--GAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLA 168 (354)
T ss_dssp EEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE--CCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCS
T ss_pred EEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC--CCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCC
Confidence 999852 00001257889987654 22 1111 232 22346799999999999999853 24
Q ss_pred CeEEEEcCCCceEEEecCCCCC-CcccccCccccCeEEEcc-CceEEEEeCCCCe---EEEEeCCCCCC-----cc----
Q 020019 171 SKIWKVGVKGEFLSIISSPLFT-PKEWYKNLVGLNGIVYHP-DGFLIVIHTFSGN---LFKIDIVDGVG-----EG---- 236 (332)
Q Consensus 171 ~~I~~v~~~g~~~~~~~~~~~~-~p~~~~~~~~~nGi~~~~-dG~Lyva~~~~~~---i~~id~~~~~~-----~~---- 236 (332)
++|+|++++|+... .++ |. ......++.+|+||++++ +|+||+++...++ |.++.... .. .+
T Consensus 169 G~I~ri~~dG~~p~--~np-f~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~-nyGwp~~~g~~~~ 244 (354)
T 3a9g_A 169 GKILRVDEEGRPPA--DNP-FPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGG-NYGWPLATGKAGR 244 (354)
T ss_dssp SEEEEECTTSCCCT--TSS-STTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTC-BCCTTTCCSCCCC
T ss_pred eEEEEEcCCCCCCC--CCC-CCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCC-cCCCCcccCCCCC
Confidence 78999999987310 111 11 011122456799999999 6799999998765 55554321 00 00
Q ss_pred -cee-EEEEecCCCCCCCCeEEE-------eCCCeEEEEeCCc--eEEEEcC-CCceEEEEEeeecCCCcccceEEEE-E
Q 020019 237 -EEI-KLIRVAGGPLSFGDGLEL-------LSPTKLVVAGNPS--ARLVESS-DGWETAAVVAKFSGPVHRLATAATV-K 303 (332)
Q Consensus 237 -~~~-~~v~~~g~~~~~pdGi~~-------~~dG~l~va~~~~--~~~v~~~-dg~~~~~~~~~~~~~~~~~pt~va~-~ 303 (332)
... ...... .....|.||++ +.+|++|+++... .+.+... +| +..+....+. .....|.++++ .
T Consensus 245 ~~~~~p~~~~~-~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g-~~~~~~~~~~-~~~~rp~~v~~~p 321 (354)
T 3a9g_A 245 GEFVDPVIDTG-SETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNM-EVRKISTFFK-NVFGRLRDVVIDD 321 (354)
T ss_dssp TTSCCCSEECT-TCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGG-CEEEEEEECT-TTSCCEEEEEECT
T ss_pred CCCcCCEeecC-CCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCC-cccceeeecc-CCCCCeeEEEECC
Confidence 000 011111 12357999999 4679999998543 3323332 23 2222222222 22456899999 7
Q ss_pred CCeEEEEEe
Q 020019 304 DGRVYLNHM 312 (332)
Q Consensus 304 ~g~lyv~~~ 312 (332)
+|.|||+..
T Consensus 322 DG~lyv~~~ 330 (354)
T 3a9g_A 322 DGGILISTS 330 (354)
T ss_dssp TSCEEEEEC
T ss_pred CCcEEEEEe
Confidence 899999764
No 43
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.77 E-value=6.9e-17 Score=154.56 Aligned_cols=201 Identities=11% Similarity=0.073 Sum_probs=138.2
Q ss_pred CccccceEEcCCCCEEEEEecC----CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 44 SFFRECAKWDDSGRRFIVSFLD----GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~~~~~----g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
...|.+++++++|++|+++... ..++.++...+.. .. .... . ...|.|+++|+++|+|||++..
T Consensus 181 ~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~-----~~-~~~~--~--~~~P~giavd~~~G~lyv~d~~-- 248 (433)
T 4hw6_A 181 IGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT-----ER-LSLC--N--ARGAKTCAVHPQNGKIYYTRYH-- 248 (433)
T ss_dssp CSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC-----CE-EEEE--E--CSSBCCCEECTTTCCEEECBTT--
T ss_pred CCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee-----cc-cccc--c--cCCCCEEEEeCCCCeEEEEECC--
Confidence 3479999999999988887422 2477776653321 10 1111 1 2479999999955999999863
Q ss_pred CCccceEEEEECCCCcE-EEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCCC---ce---EEEecC---
Q 020019 120 GNKYSAVAAYDLSTWNR-LFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVKG---EF---LSIISS--- 188 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~-~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~g---~~---~~~~~~--- 188 (332)
.++|++||+++++. ....... ....+.+++++++|+ |||+|+.+++|++++.++ +. ..+...
T Consensus 249 ---~~~V~~~d~~~g~~~~~~~~~~----~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~ 321 (433)
T 4hw6_A 249 ---HAMISSYDPATGTLTEEEVMMD----TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSS 321 (433)
T ss_dssp ---CSEEEEECTTTCCEEEEEEECS----CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTC
T ss_pred ---CCEEEEEECCCCeEEEEEeccC----CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCC
Confidence 45799999988876 3333331 124556799999997 999999999999988763 21 233322
Q ss_pred CCCC-CcccccCccccCeEEE---------ccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecC------------
Q 020019 189 PLFT-PKEWYKNLVGLNGIVY---------HPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAG------------ 246 (332)
Q Consensus 189 ~~~~-~p~~~~~~~~~nGi~~---------~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g------------ 246 (332)
..+. .+.....+..|.||++ +++|.|||+++.+++|.+|+++ + .+..+...+
T Consensus 322 ~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G-----~v~t~~G~g~~~~~G~~dG~~ 395 (433)
T 4hw6_A 322 PGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-G-----RVTTYAGRGNSREWGYVDGEL 395 (433)
T ss_dssp CCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-S-----EEEEEECCCTTCSSCCBCEET
T ss_pred CccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-C-----CEEEEEeCCCCCccccCCCcc
Confidence 1111 1111234667999999 8888999999999999999975 4 333333111
Q ss_pred ---CCCCCCCeEEEe-CCCeEEEEeCC
Q 020019 247 ---GPLSFGDGLELL-SPTKLVVAGNP 269 (332)
Q Consensus 247 ---~~~~~pdGi~~~-~dG~l~va~~~ 269 (332)
..+..|.||+++ ++|+|||++..
T Consensus 396 ~~~~~~~~P~giavd~~~g~lyVaD~~ 422 (433)
T 4hw6_A 396 RSQALFNHPTSIAYDMKRKCFYIGDCD 422 (433)
T ss_dssp TTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred ccccEeCCCcEEEEECCCCEEEEEeCC
Confidence 125679999999 88999999843
No 44
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.76 E-value=8.9e-16 Score=145.33 Aligned_cols=214 Identities=14% Similarity=0.123 Sum_probs=149.2
Q ss_pred CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCC----cEEEEE
Q 020019 65 DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTW----NRLFLT 140 (332)
Q Consensus 65 ~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g----~~~~~~ 140 (332)
...|.+++.++... . .+.. .+ ..+.+|++|+.+++||+++.. ..+|++++++.. .....+
T Consensus 91 ~~~I~~i~l~~~~~-----~--~~~~--~~--~~~~~l~~d~~~~~lywsD~~-----~~~I~~~~~~g~~~~~~~~~~~ 154 (400)
T 3p5b_L 91 RHEVRKMTLDRSEY-----T--SLIP--NL--RNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVI 154 (400)
T ss_dssp TTEEEEECTTSCSC-----E--EEEC--SC--SCEEEEEEETTTTEEEEEETT-----TTEEEEEEC------CCCEEEE
T ss_pred cceeEEEccCCcce-----e--Eecc--cc--CcceEEeeeeccCceEEEecC-----CCeEEEEEcccCCCCCcceEEE
Confidence 57899999886653 1 2332 22 378999999877999999864 457889998652 222222
Q ss_pred ecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccC-ceEEEEe
Q 020019 141 QLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPD-GFLIVIH 218 (332)
Q Consensus 141 ~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~d-G~Lyva~ 218 (332)
. .....|.++++|. .++||++|+..++|.+++++|+....+... .+..|+||+++|. |.||+++
T Consensus 155 ~-----~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~---------~~~~P~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 155 S-----RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---------NGSKPRAIVVDPVHGFMYWTD 220 (400)
T ss_dssp C-----SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC---------SSCCEEEEEEETTTTEEEEEE
T ss_pred e-----CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC---------CCCCcceEEEecccCeEEEEe
Confidence 1 1246899999998 578999999999999999998865443222 2345789999986 4999999
Q ss_pred CC-CCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC-CCeEEEEeCC--ceEEEEcCCCceEEEEEeeecCCCc
Q 020019 219 TF-SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS-PTKLVVAGNP--SARLVESSDGWETAAVVAKFSGPVH 294 (332)
Q Consensus 219 ~~-~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~~~--~~~~v~~~dg~~~~~~~~~~~~~~~ 294 (332)
+. .++|+++++++. ..+.+. . ..+..|.||++|+ +++||+++.. .++ +...+|.....+... ...+
T Consensus 221 ~~~~~~I~~~~~dG~-----~~~~~~-~-~~l~~P~glavd~~~~~lY~aD~~~~~I~-~~d~dG~~~~~~~~~--~~~l 290 (400)
T 3p5b_L 221 WGTPAKIKKGGLNGV-----DIYSLV-T-ENIQWPNGITLDLLSGRLYWVDSKLHSIS-SIDVNGGNRKTILED--EKRL 290 (400)
T ss_dssp CSSSCCEEEEETTSC-----SCEEEE-C-SSCSCEEEEEEETTTTEEEEEETTTTEEE-EEETTSCCCEEEEEC--SSTT
T ss_pred CCCCCEEEEEeCCCC-----ccEEEE-E-CCCCceEEEEEEeCCCEEEEEECCCCEEE-EEeCCCCccEEEEeC--CCCC
Confidence 87 489999999854 233232 2 3567899999995 5899999844 333 344566233333331 1246
Q ss_pred ccceEEEEECCeEEEEEecCcccc
Q 020019 295 RLATAATVKDGRVYLNHMLGFGYP 318 (332)
Q Consensus 295 ~~pt~va~~~g~lyv~~~~g~~~~ 318 (332)
..|.++++.+++||++++....+.
T Consensus 291 ~~P~gl~v~~~~lywtd~~~~~V~ 314 (400)
T 3p5b_L 291 AHPFSLAVFEDKVFWTDIINEAIF 314 (400)
T ss_dssp SSEEEEEEETTEEEEEESSSCSEE
T ss_pred CCCEEEEEeCCEEEEecCCCCeEE
Confidence 789999999999999887665543
No 45
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.75 E-value=7.3e-16 Score=153.65 Aligned_cols=197 Identities=14% Similarity=0.110 Sum_probs=143.9
Q ss_pred cccceEEcC-CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDD-SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~-~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
.|.++++|+ ++++|+++...++|+++++++... + ++.. .++ ..|.||++|...++||+++.. ..
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~-----~--~v~~-~~~--~~p~GlAvD~~~~~lY~tD~~-----~~ 414 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS-----Q--FVVT-AQI--AHPDGIAVDWVARNLYWTDTG-----TD 414 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----E--EEEC-SSC--SCCCEEEEETTTTEEEEEETT-----TT
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc-----E--EEEE-CCC--CCcCceEEecccCcEEEEeCC-----CC
Confidence 678899998 466777888889999999986442 2 3432 222 379999999756899999864 45
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCCC-CeEEEEcCCCceEEEecCCCCCCcccccCccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVTG-SKIWKVGVKGEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~~-~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
.|.+.+++........ ..+...|++|++||. |.+|+||++. ++|++.+.+|+....+... .+..
T Consensus 415 ~I~v~~~~G~~~~~l~-----~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~---------~l~~ 480 (619)
T 3s94_A 415 RIEVTRLNGTMRKILI-----SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNT---------SLGW 480 (619)
T ss_dssp EEEEEETTSCSCEEEE-----CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---------SCSC
T ss_pred cEEEEeCCCCeEEEEE-----ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeC---------CCCC
Confidence 7888988754332222 123578999999996 8999999875 8999999998754433222 2356
Q ss_pred cCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC--ceEEEEcCCC
Q 020019 203 LNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP--SARLVESSDG 279 (332)
Q Consensus 203 ~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~--~~~~v~~~dg 279 (332)
|+||++|+++ +|||++...++|+++++++. ..+.+.. ..+..|.||++..+ .||+++.. .+..+...+|
T Consensus 481 P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~-----~~~~~~~--~~l~~P~glav~~~-~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 481 PNGLALDYDEGKIYWGDAKTDKIEVMNTDGT-----GRRVLVE--DKIPHIFGFTLLGD-YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSC-----CCEEEEE--CCCCSSCCEEEETT-EEEEECTTSSCEEEEESSSC
T ss_pred CeeeEEcccCCEEEEEECCCCEEEEEecCCC-----ceEEEec--cCCCCcEEEEEECC-EEEEeecCCCeEEEEEcCCC
Confidence 8999999865 99999999999999999854 2333322 25678999999865 99999854 3444455555
No 46
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.75 E-value=1.8e-17 Score=167.66 Aligned_cols=220 Identities=17% Similarity=0.114 Sum_probs=149.7
Q ss_pred CccccceEEcCCC-CEEEEEecCCeEEEEECCCC---CCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 44 SFFRECAKWDDSG-RRFIVSFLDGGIGQVAVPDD---YPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 44 ~~~pegia~d~~g-~~~~~~~~~g~I~~vd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
...|++++|++++ ++|+++...++|+++++++. .. .+ .++ ..++ ..|.||++|...++||+++..
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~----~~--~~i-~~~~--~~P~glavD~~~g~LY~tD~~-- 473 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS----YD--TVI-SRDI--QAPDGLAVDWIHSNIYWTDSV-- 473 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC----CC--CBC-CSCC----CCCEECCCSSSBCEECCTT--
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc----eE--EEE-eCCC--CCcceEEEEeeCCcEEEEecc--
Confidence 3489999999865 56666677899999998751 11 01 222 1122 368999999666899999753
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCCC-CeEEEEcCCCceEEEecCCCCCCcccc
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVTG-SKIWKVGVKGEFLSIISSPLFTPKEWY 197 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~~-~~I~~v~~~g~~~~~~~~~~~~~p~~~ 197 (332)
...|.+++++......++. .....|++|++||+ |.||++|+.. +.|++++++|+....+...
T Consensus 474 ---~~~I~v~d~dg~~~~~l~~-----~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~-------- 537 (699)
T 1n7d_A 474 ---LGTVSVADTKGVKRKTLFR-----EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE-------- 537 (699)
T ss_dssp ---TSCEEEEBSSSCCEEEECC-----CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS--------
T ss_pred ---CCeEEEEecCCCceEEEEe-----CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC--------
Confidence 4578899987544432221 12467999999996 6899999876 8999999998754333221
Q ss_pred cCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc--eEEE
Q 020019 198 KNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS--ARLV 274 (332)
Q Consensus 198 ~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~--~~~v 274 (332)
.+..|+||++++++ +|||++...++|+++++++. ..+.+......+..|+||+++.+ .||+++... +..+
T Consensus 538 -~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~-----~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 538 -NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-----NRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSA 610 (699)
T ss_dssp -SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS-----CCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEE
T ss_pred -CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC-----ceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEE
Confidence 23568999999886 99999999999999999853 23333222134678999999975 899998543 3323
Q ss_pred EcCCCceEEEEEeeecCCCcccceEEEE
Q 020019 275 ESSDGWETAAVVAKFSGPVHRLATAATV 302 (332)
Q Consensus 275 ~~~dg~~~~~~~~~~~~~~~~~pt~va~ 302 (332)
...+| +..+.+..+ +..|+++++
T Consensus 611 d~~~G----~~~~~i~~~-~~~P~~i~v 633 (699)
T 1n7d_A 611 NRLTG----SDVNLLAEN-LLSPEDMVL 633 (699)
T ss_dssp ETTTE----EEEECCCTT-CSSCCCCCB
T ss_pred EccCC----CceEEeecC-CCCCcEEEE
Confidence 33445 444444332 556777776
No 47
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=3.9e-16 Score=149.16 Aligned_cols=202 Identities=10% Similarity=0.025 Sum_probs=138.7
Q ss_pred CCccccceEEcCCCC-EEEEEecCC----eEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeC
Q 020019 43 SSFFRECAKWDDSGR-RFIVSFLDG----GIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAAD 117 (332)
Q Consensus 43 ~~~~pegia~d~~g~-~~~~~~~~g----~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~ 117 (332)
....|.+++++++|+ +|+++...+ .++.++.++ .+ .....+. .+ .+|.++++++++|+||+++..
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~~----~~~~~l~---~~--~~p~giavdp~~g~lyv~d~~ 246 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-GF----KVITELT---KG--QNCNGAETHPINGELYFNSWN 246 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-TS----CSEEEEE---EC--SSCCCEEECTTTCCEEEEETT
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-ce----eeeeeec---cC--CCceEEEEeCCCCEEEEEECC
Confidence 344799999999999 677665332 577787653 32 1111221 12 379999999955999999874
Q ss_pred cCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCCCc------eEEEecC--
Q 020019 118 VFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVKGE------FLSIISS-- 188 (332)
Q Consensus 118 ~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~g~------~~~~~~~-- 188 (332)
.++|++||+++++......+. ....|++++++++|+ ||++|..+++|++++.++. ...+...
T Consensus 247 -----~~~V~~~~~~~~~~~~~~~~~----~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g 317 (430)
T 3tc9_A 247 -----AGQVFRYDFTTQETTPLFTIQ----DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQG 317 (430)
T ss_dssp -----TTEEEEEETTTTEEEEEEECS----SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTT
T ss_pred -----CCEEEEEECCCCcEEEEEEcC----CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCC
Confidence 468999999876654444441 136799999999998 9999999999999998753 1222221
Q ss_pred -CCCC-CcccccCccccC-eEEEc--------cCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEec------C-----
Q 020019 189 -PLFT-PKEWYKNLVGLN-GIVYH--------PDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA------G----- 246 (332)
Q Consensus 189 -~~~~-~p~~~~~~~~~n-Gi~~~--------~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~------g----- 246 (332)
..+. .+.....+..|. |++++ ++|.|||++..+++|.+|+++ + .+..+... |
T Consensus 318 ~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~-G-----~v~~~~g~g~~~~~G~~dG~ 391 (430)
T 3tc9_A 318 AKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQ-G-----RVTTFAGRGSNGTSGYNDGD 391 (430)
T ss_dssp CBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTT-S-----EEEEEEECCTTSSSSCBCEE
T ss_pred CCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCC-C-----cEEEEEeCCCCCCCcccCCC
Confidence 1111 111122456788 89884 568999999999999999965 4 23333221 0
Q ss_pred ----CCCCCCCeEEEeC-CCeEEEEeCC
Q 020019 247 ----GPLSFGDGLELLS-PTKLVVAGNP 269 (332)
Q Consensus 247 ----~~~~~pdGi~~~~-dG~l~va~~~ 269 (332)
..+..|.||++++ +|.|||++..
T Consensus 392 ~~~~~~~~~P~giavd~~~g~lyVaD~~ 419 (430)
T 3tc9_A 392 LRQEARFNHPEGIVYDEERECFFIGDRE 419 (430)
T ss_dssp TTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred chhhcEeCCCcEEEEECCCCEEEEEECC
Confidence 1256799999999 6999999843
No 48
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.75 E-value=2.4e-16 Score=157.12 Aligned_cols=198 Identities=17% Similarity=0.131 Sum_probs=137.3
Q ss_pred cccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
.|.+++++++ +++|+++...++|+++++++... .+ .+.. .++ ..|.||++|..+++||+++.. .+
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~----~~--~v~~-~~~--~~P~GlAvD~~~~~ly~~d~~-----~~ 106 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES----VQ--NVVV-SGL--LSPDGLACDWLGEKLYWTDSE-----TN 106 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC---------CE--EEEC-SSC--SCEEEEEEETTTTEEEEEETT-----TT
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc----eE--EEEe-CCC--CCcCeEEEEecCCEEEEEeCC-----CC
Confidence 7899999985 55677778889999999875431 12 2332 222 379999999976999999863 46
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCC-CCeEEEEcCCCceEEEecCCCCCCcccccCccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVT-GSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~-~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
.|.+++++......... .....|++|++||. |.||+||++ .++|++.+++|+....+... ....
T Consensus 107 ~I~v~~~dG~~~~~l~~-----~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~---------~~~~ 172 (619)
T 3s94_A 107 RIEVSNLDGSLRKVLFW-----QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS---------EIYW 172 (619)
T ss_dssp EEEEEETTSCSCEEEEC-----SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---------SCSS
T ss_pred EEEEEECCCCCEEEEEe-----CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeC---------CCCC
Confidence 78999987544332221 12467999999996 789999987 67999999998754433222 2356
Q ss_pred cCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC--ceEEEEcCCC
Q 020019 203 LNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP--SARLVESSDG 279 (332)
Q Consensus 203 ~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~--~~~~v~~~dg 279 (332)
|+||++++++ +|||++...++|+++++++. ..+.+. . ..+..|.||+++.+ +||+++.. .+..+....|
T Consensus 173 P~Glald~~~~~LY~aD~~~~~I~~~~~dG~-----~~~~~~-~-~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-----NRQAVV-K-GSLPHPFALTLFED-ILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTCCEEEESSSCC-----EEC-----------CCCEEESSS-EEEEECTTTCSEEEEESSSC
T ss_pred CcEEEEEccCCEEEEEeCCCCeEEEecCCCC-----ccEEEE-e-CCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCC
Confidence 8999999875 99999999999999999854 222222 2 24578999999976 99999843 3444444455
No 49
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.75 E-value=3e-16 Score=144.12 Aligned_cols=214 Identities=14% Similarity=0.107 Sum_probs=147.5
Q ss_pred CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcE-EEEEecC
Q 020019 65 DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNR-LFLTQLS 143 (332)
Q Consensus 65 ~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~-~~~~~l~ 143 (332)
...|.++++++... +...... +. ..+.+|.+|+.+++||+++.. ..+|.+++++++.. .....
T Consensus 12 ~~~I~~i~l~~~~~-----~~~~~~~--~~--~~~~~ld~d~~~~~lyw~D~~-----~~~I~r~~~~g~~~~~~~~~-- 75 (318)
T 3sov_A 12 RRDLRLVDATNGKE-----NATIVVG--GL--EDAAAVDFVFSHGLIYWSDVS-----EEAIKRTEFNKTESVQNVVV-- 75 (318)
T ss_dssp EEEEEEEETTCTTS-----CCEEEEE--EE--EEEEEEEEEGGGTEEEEEETT-----TTEEEEEETTSSSCCCEEEE--
T ss_pred cCeEEEEECCCCce-----EEEEEec--CC--CccEEEEEEeCCCEEEEEECC-----CCcEEEEEccCCCceEEEEc--
Confidence 36799999986531 1001221 22 257899999867999999863 46799999876532 11111
Q ss_pred CCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCC-
Q 020019 144 GPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTF- 220 (332)
Q Consensus 144 ~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~- 220 (332)
.+...|.++++|+ +|+||++|...++|.+++++|+....+... .+..|+||+++|.+ .||+++..
T Consensus 76 ---~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~---------~~~~P~giavdp~~g~ly~td~~~ 143 (318)
T 3sov_A 76 ---SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ---------ELDQPRAIALDPSSGFMYWTDWGE 143 (318)
T ss_dssp ---ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---------SCSSEEEEEEEGGGTEEEEEECSS
T ss_pred ---CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC---------CCCCccEEEEeCCCCEEEEEecCC
Confidence 1235789999997 578999999999999999998754433222 23468899999865 99999975
Q ss_pred CCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC-CCeEEEEeCCceE-EEEcCCCceEEEEEeeecCCCcccce
Q 020019 221 SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS-PTKLVVAGNPSAR-LVESSDGWETAAVVAKFSGPVHRLAT 298 (332)
Q Consensus 221 ~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~~~~~~-~v~~~dg~~~~~~~~~~~~~~~~~pt 298 (332)
.++|+|+++++. ..+.+. . ..+..|.||++|+ +++||+++....+ .....+|.....+.. ..+..|.
T Consensus 144 ~~~I~r~~~dG~-----~~~~~~-~-~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~----~~~~~P~ 212 (318)
T 3sov_A 144 VPKIERAGMDGS-----SRFIII-N-SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK----GSLPHPF 212 (318)
T ss_dssp SCEEEEEETTSC-----SCEEEE-C-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----SCCSCEE
T ss_pred CCEEEEEEcCCC-----CeEEEE-E-CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec----CCCCCce
Confidence 689999999853 233232 2 2567899999997 5899999854322 234456622222322 2477899
Q ss_pred EEEEECCeEEEEEecCccc
Q 020019 299 AATVKDGRVYLNHMLGFGY 317 (332)
Q Consensus 299 ~va~~~g~lyv~~~~g~~~ 317 (332)
++++.++.||++.+....+
T Consensus 213 glav~~~~lywtd~~~~~V 231 (318)
T 3sov_A 213 ALTLFEDILYWTDWSTHSI 231 (318)
T ss_dssp EEEEETTEEEEEETTTTEE
T ss_pred EEEEeCCEEEEEecCCCeE
Confidence 9999889999987655443
No 50
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.74 E-value=2.9e-16 Score=145.20 Aligned_cols=206 Identities=17% Similarity=0.107 Sum_probs=139.9
Q ss_pred ccccceEEcCCCCEEEEEec-----CCeEEEEECCCCCCCccceeeeEEecccC---cCCCccceEEEeCCCCeEEEEEe
Q 020019 45 FFRECAKWDDSGRRFIVSFL-----DGGIGQVAVPDDYPPGTVLEEVTLVKDLE---LTGNGSLGLVLDHPRNRLLVVAA 116 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~-----~g~I~~vd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~gi~vd~~~g~l~v~~~ 116 (332)
..|.++++|++|++|+++.. .++|+++|+.+++. .. .+. .+. .....+++|+++++++++|+++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~----~~--~~~-~~~~~~~~~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQL----SR--VIY-LPPPITLSNSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEE----EE--EEE-CCTTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeE----EE--EEE-CChhhcccccccceEEEecCCCEEEEEcC
Confidence 38999999999999998854 58999999887652 22 221 111 11235799999976689999986
Q ss_pred CcCCCccceEEEEECCCCcEEEEEecC-C--CC------CC---------------CCCccceEECCCCc-EEEEeCCCC
Q 020019 117 DVFGNKYSAVAAYDLSTWNRLFLTQLS-G--PS------DG---------------KSCADDVTVDAEGN-AYVTDVTGS 171 (332)
Q Consensus 117 ~~~~~~~~~l~~~d~~~g~~~~~~~l~-~--~~------~~---------------~~~~ndiavd~dG~-lyvtd~~~~ 171 (332)
... ....|.+||+++++......-. . +. .+ ...+|+|++++||+ +|+++....
T Consensus 140 ~~~--~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~ 217 (343)
T 2qe8_A 140 APD--DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST 217 (343)
T ss_dssp CSG--GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS
T ss_pred ccC--CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC
Confidence 210 1357899999888765433110 0 00 00 12479999999985 999999888
Q ss_pred eEEEEcCC----CceE--EEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEec
Q 020019 172 KIWKVGVK----GEFL--SIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA 245 (332)
Q Consensus 172 ~I~~v~~~----g~~~--~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~ 245 (332)
.||+++.+ +... .+. ..+.. ......|+||+++++|.||+++..+++|.+++++++ ....+...
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~--~~~~~---~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G-----~~~~~~~~ 287 (343)
T 2qe8_A 218 SMYRIKSADLSNLQLTDAELG--SKIER---YSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR-----AYKLLVTD 287 (343)
T ss_dssp EEEEEEHHHHTCTTCCHHHHH--TTCEE---EEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT-----EEEEEEEC
T ss_pred eEEEEEHHHhcCCCCChhhhh--cceEe---cccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC-----CEEEEEEC
Confidence 99999853 1110 000 00000 001236899999999999999999999999999545 23333222
Q ss_pred CCCCCCCCeEEEeCCCeEEEEeCCc
Q 020019 246 GGPLSFGDGLELLSPTKLVVAGNPS 270 (332)
Q Consensus 246 g~~~~~pdGi~~~~dG~l~va~~~~ 270 (332)
..+..|++++++++|+|||+++..
T Consensus 288 -~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 288 -EKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp -GGGSCEEEEEECTTSCEEEEECCG
T ss_pred -CceecCCeeEECCCCcEEEEeCcc
Confidence 135789999999999999998654
No 51
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.74 E-value=4.9e-15 Score=135.42 Aligned_cols=234 Identities=15% Similarity=0.164 Sum_probs=155.5
Q ss_pred CccccceEEcCCCCEEEEE-ec------CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEe
Q 020019 44 SFFRECAKWDDSGRRFIVS-FL------DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAA 116 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~~-~~------~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~ 116 (332)
+..|.+++++++|+.+|+. .. +++|+++|..+++. .. .+. . +..+.+++++++.+++|+++.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~----~~--~~~-~----~~~~~~~~~s~dg~~l~v~~~ 108 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEV----TQ--AIH-N----DLKPFGATINNTTQTLWFGNT 108 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCE----EE--EEE-E----SSCCCSEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeE----EE--EEe-c----CCCcceEEECCCCCEEEEEec
Confidence 3468899999999766554 33 56899999887752 12 221 1 125889999997455888876
Q ss_pred CcCCCccceEEEEECCCCcEEEEEecCCCCC---C-CCCccceEECCCCc-EEEEeC-CCCeEEEEcCC-CceEEEecCC
Q 020019 117 DVFGNKYSAVAAYDLSTWNRLFLTQLSGPSD---G-KSCADDVTVDAEGN-AYVTDV-TGSKIWKVGVK-GEFLSIISSP 189 (332)
Q Consensus 117 ~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~---~-~~~~ndiavd~dG~-lyvtd~-~~~~I~~v~~~-g~~~~~~~~~ 189 (332)
. .+.|.+||+++++....+.+..... . ...|++++++++|+ +|+++. ..+.|+++|.+ ++....+...
T Consensus 109 ~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 183 (353)
T 3vgz_A 109 V-----NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT 183 (353)
T ss_dssp T-----TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC
T ss_pred C-----CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC
Confidence 3 3579999999999877776632110 0 12378999999986 899984 47889999987 4444333211
Q ss_pred CCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCC-CCCCCCeEEEeCCCe-EEEE
Q 020019 190 LFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGG-PLSFGDGLELLSPTK-LVVA 266 (332)
Q Consensus 190 ~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~-~~~~pdGi~~~~dG~-l~va 266 (332)
...++++++++|| .||+++. +++|+.+|+.++ +....+..... +...+.+++++++|+ +|++
T Consensus 184 ----------~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 184 ----------GKMSTGLALDSEGKRLYTTNA-DGELITIDTADN----KILSRKKLLDDGKEHFFINISLDTARQRAFIT 248 (353)
T ss_dssp ----------CTTCCCCEEETTTTEEEEECT-TSEEEEEETTTT----EEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred ----------CCccceEEECCCCCEEEEEcC-CCeEEEEECCCC----eEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence 1247899999999 8999876 778999999877 24444554321 234577899999976 8888
Q ss_pred eCC--ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-E-CCeEEEEEecCc
Q 020019 267 GNP--SARLVESSDGWETAAVVAKFSGPVHRLATAATV-K-DGRVYLNHMLGF 315 (332)
Q Consensus 267 ~~~--~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~-~g~lyv~~~~g~ 315 (332)
+.. ...++...++ ++...+..+ .|.++++ . ++++|+++..+.
T Consensus 249 ~~~~~~v~~~d~~~~----~~~~~~~~~---~~~~~~~s~dg~~l~v~~~~~~ 294 (353)
T 3vgz_A 249 DSKAAEVLVVDTRNG----NILAKVAAP---ESLAVLFNPARNEAYVTHRQAG 294 (353)
T ss_dssp ESSSSEEEEEETTTC----CEEEEEECS---SCCCEEEETTTTEEEEEETTTT
T ss_pred eCCCCEEEEEECCCC----cEEEEEEcC---CCceEEECCCCCEEEEEECCCC
Confidence 743 3344455555 233333322 2456777 3 456888765443
No 52
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.74 E-value=3.6e-14 Score=129.62 Aligned_cols=237 Identities=12% Similarity=0.085 Sum_probs=160.8
Q ss_pred ccccceEEcCCCC-EEEEEecCCeEEEEECCCCCCCccceeeeEEecccCc-----CCCccceEEEeCCCCeEEEEEeCc
Q 020019 45 FFRECAKWDDSGR-RFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLEL-----TGNGSLGLVLDHPRNRLLVVAADV 118 (332)
Q Consensus 45 ~~pegia~d~~g~-~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~gi~vd~~~g~l~v~~~~~ 118 (332)
..|.+++++++|+ +|+++..++.|+.+|..+++. .. .+...... ....+.+++++++.+++|++...
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~- 161 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEV----KG--RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG- 161 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCE----EE--EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCee----EE--EEecCCCccccccCCCCCceEEECCCCCEEEEEecC-
Confidence 3588999999998 555556678999999987762 12 22111000 00147899999985678888743
Q ss_pred CCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC-CceEEEecCCCCCCccc
Q 020019 119 FGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEW 196 (332)
Q Consensus 119 ~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~ 196 (332)
..+.|++||+++++....+... ...+++++++++|+ +|+++. .+.|+.+|.. ++.......... .
T Consensus 162 ---~~~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~-~--- 228 (353)
T 3vgz_A 162 ---KESVIWVVDGGNIKLKTAIQNT-----GKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDD-G--- 228 (353)
T ss_dssp ---SSCEEEEEETTTTEEEEEECCC-----CTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCS-S---
T ss_pred ---CCceEEEEcCCCCceEEEecCC-----CCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCC-C---
Confidence 1357999999998877655421 24588999999986 777765 7899999976 444433322111 0
Q ss_pred ccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeCC--ceE
Q 020019 197 YKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGNP--SAR 272 (332)
Q Consensus 197 ~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~~--~~~ 272 (332)
....+.+++++||| .||+++...++|+.+|+.+++ .+..+..+ .|.+++++++|+ +|+++.. ...
T Consensus 229 --~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~----~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 229 --KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN----ILAKVAAP-----ESLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp --SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC----EEEEEECS-----SCCCEEEETTTTEEEEEETTTTEEE
T ss_pred --CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc----EEEEEEcC-----CCceEEECCCCCEEEEEECCCCeEE
Confidence 12346789999999 899999999999999998773 45555543 357899999987 8998743 334
Q ss_pred EEEcCCCceEEEEEeeecCCCcccceEEEE-E-CCeEEEEEecCcccc
Q 020019 273 LVESSDGWETAAVVAKFSGPVHRLATAATV-K-DGRVYLNHMLGFGYP 318 (332)
Q Consensus 273 ~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~-~g~lyv~~~~g~~~~ 318 (332)
++...++ ++...+..+ ..|.++++ . ++.|||++..+....
T Consensus 298 ~~d~~~~----~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~~~~~~ 339 (353)
T 3vgz_A 298 VIDAKSY----KVVKTFDTP--THPNSLALSADGKTLYVSVKQKSTKQ 339 (353)
T ss_dssp EEETTTT----EEEEEEECC--SEEEEEEECTTSCEEEEEEECCCBTT
T ss_pred EEECCCC----eEEEEEecC--CCCCeEEEcCCCCEEEEEEccccccc
Confidence 4455556 344444332 36889999 4 456999888765443
No 53
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=1.1e-15 Score=147.29 Aligned_cols=209 Identities=10% Similarity=0.041 Sum_probs=141.3
Q ss_pred cccceEE-------cCCCC-EEEEEecC------CeEEEEECCC-CCCCccceeeeEEecccCcCCCccceEEEeCCCCe
Q 020019 46 FRECAKW-------DDSGR-RFIVSFLD------GGIGQVAVPD-DYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR 110 (332)
Q Consensus 46 ~pegia~-------d~~g~-~~~~~~~~------g~I~~vd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~ 110 (332)
.|.+|++ +++|+ +|+++... ..|++++... +++... .....+. .+ .+|+|+++++++++
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~-~~~~~v~---~~--~~p~giavdp~~g~ 260 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDR-SDIQLIA---AY--KQCNGATIHPINGE 260 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTT-SCEEEEE---EE--SCCCCEEECTTTCC
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeec-ccceeec---cC--CCceEEEEcCCCCe
Confidence 5899999 99998 66666443 2488887554 232100 0000121 22 37899999997799
Q ss_pred EEEEEeCcCCCccceEEEEECC-------CCcE------------EEEEecCCCCCCCCCccceEECCCCc-EEEEeCCC
Q 020019 111 LLVVAADVFGNKYSAVAAYDLS-------TWNR------------LFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTG 170 (332)
Q Consensus 111 l~v~~~~~~~~~~~~l~~~d~~-------~g~~------------~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~ 170 (332)
||+++.. .++|++||++ +++. .....+. ....|.+|+++|+|+ +||+|+.+
T Consensus 261 LYvtd~~-----~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~----~~~~p~~ia~~p~G~~lYvaD~~~ 331 (496)
T 3kya_A 261 LYFNSYE-----KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA----DPSWEFQIFIHPTGKYAYFGVINN 331 (496)
T ss_dssp EEEEETT-----TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS----SSSCCEEEEECTTSSEEEEEETTT
T ss_pred EEEEECC-----CCEEEEEecccccccccCceeecccccccccccceeEecC----CCCCceEEEEcCCCCEEEEEeCCC
Confidence 9999873 4679999997 5554 1223331 246789999999998 89999999
Q ss_pred CeEEEEcCCCce------EEEecC---CCCC-CcccccCccccC-eEEEc-------cCceEEEEeCCCCeEEEEeCCCC
Q 020019 171 SKIWKVGVKGEF------LSIISS---PLFT-PKEWYKNLVGLN-GIVYH-------PDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 171 ~~I~~v~~~g~~------~~~~~~---~~~~-~p~~~~~~~~~n-Gi~~~-------~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
++|++++.++.. ..+... ..+. .+.....+..|. |++++ ++|.|||+++.+++|.+|+++ +
T Consensus 332 h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~-G 410 (496)
T 3kya_A 332 HYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPE-G 410 (496)
T ss_dssp TEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTT-C
T ss_pred CEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCC-C
Confidence 999998877532 233332 1111 122233566799 88887 678999999999999999965 4
Q ss_pred CCccceeEEEEec------------C---------CCCCCCCeEEEeCC-CeEEEEe--CCceEEEE
Q 020019 233 VGEGEEIKLIRVA------------G---------GPLSFGDGLELLSP-TKLVVAG--NPSARLVE 275 (332)
Q Consensus 233 ~~~~~~~~~v~~~------------g---------~~~~~pdGi~~~~d-G~l~va~--~~~~~~v~ 275 (332)
.+..+.-. | ..+..|.||+++++ |+|||++ |+.+|.+.
T Consensus 411 -----~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 411 -----IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTIS 472 (496)
T ss_dssp -----BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred -----CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEE
Confidence 34444321 1 13567999999997 9999998 44455443
No 54
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.72 E-value=1e-14 Score=134.80 Aligned_cols=263 Identities=12% Similarity=0.043 Sum_probs=161.6
Q ss_pred eEEEecCCc-cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCc--C-CCccceEEEeCC---CC
Q 020019 37 VYHYHSSSF-FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLEL--T-GNGSLGLVLDHP---RN 109 (332)
Q Consensus 37 ~i~~~~~~~-~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~gi~vd~~---~g 109 (332)
.++....++ .|.++++.++|++|++....|+|+++++++++. + .+..-|.. . ..+++||+++|+ ++
T Consensus 23 ~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~-----~--~v~~~~~v~~~g~~GllGia~~Pdf~~~g 95 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK-----T--ELGEVPGVSPSGEGGLLGIALSPDYASDH 95 (347)
T ss_dssp EEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-----E--EEEECTTCCCBTTBSEEEEEECTTHHHHC
T ss_pred eeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE-----e--eecccCceeecCCCCceeeEeccccccCC
Confidence 455555666 999999999999988887689999998765542 1 12111211 1 247899999984 58
Q ss_pred eEEEEEeCcCCCccceEEEEECCCC--------cEEE-EEecCCCCCCCCCccceEECCCCcEEEEe-------------
Q 020019 110 RLLVVAADVFGNKYSAVAAYDLSTW--------NRLF-LTQLSGPSDGKSCADDVTVDAEGNAYVTD------------- 167 (332)
Q Consensus 110 ~l~v~~~~~~~~~~~~l~~~d~~~g--------~~~~-~~~l~~~~~~~~~~ndiavd~dG~lyvtd------------- 167 (332)
.||++.... ..++|.+|....+ +... ...++ ....++.+.|++++||.|||+.
T Consensus 96 ~lYv~yt~~---~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p--~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~ 170 (347)
T 3das_A 96 MVYAYFTSA---SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIP--KGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRK 170 (347)
T ss_dssp EEEEEEECS---SSEEEEEEEBCTTSCTTCCBCCCEEEEEEEC--CCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTT
T ss_pred EEEEEEecC---CCCEEEEEEeCCCCcccccCCCcEEEEEcCC--CCCCccCccccCCCCCCEEEEECCCCCCccccCCC
Confidence 999986532 2357888876542 1222 22343 2335788999999999999984
Q ss_pred CCCCeEEEEcCCCceEEEecCCCCC-CcccccCccccCeEEEccCceEEEEeCCCC---eEEEEeCCCCCC-----ccc-
Q 020019 168 VTGSKIWKVGVKGEFLSIISSPLFT-PKEWYKNLVGLNGIVYHPDGFLIVIHTFSG---NLFKIDIVDGVG-----EGE- 237 (332)
Q Consensus 168 ~~~~~I~~v~~~g~~~~~~~~~~~~-~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~---~i~~id~~~~~~-----~~~- 237 (332)
...++|+|++++|+... .+ .|. ......++.+|.||+++++|.||+++.... .|.++... +.. .+.
T Consensus 171 ~~~G~IlRi~~dG~ip~--~n-Pf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G-~nyGwP~~~g~~ 246 (347)
T 3das_A 171 SLGGKILRMTPDGEPAP--GN-PFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPG-DNYGWPEAEGKG 246 (347)
T ss_dssp CSTTCEEEECTTSSBCT--TC-SSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTT-CBCCTTTCCSSC
T ss_pred CCCCEEEEEeCCCCccC--CC-CCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCC-CEecCCcccCCC
Confidence 24689999999987321 11 121 112233566899999999999999998653 46666432 110 000
Q ss_pred ----ee-EEEEecCCCCCCCCeEEEeCCCeEEEEeCC--ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-ECCeEEE
Q 020019 238 ----EI-KLIRVAGGPLSFGDGLELLSPTKLVVAGNP--SARLVESSDGWETAAVVAKFSGPVHRLATAATV-KDGRVYL 309 (332)
Q Consensus 238 ----~~-~~v~~~g~~~~~pdGi~~~~dG~l~va~~~--~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv 309 (332)
.+ ..+... .....|.||++. +|.+|++... ..+.+....+....+....+. .....|..|++ .+|.|||
T Consensus 247 ~~~~~~~P~~~~~-~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~-~~~gR~~dv~~~pDG~lyv 323 (347)
T 3das_A 247 GGSGFHDPVAQWS-TDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLE-GEYGRLRTVAPAGGDKLWL 323 (347)
T ss_dssp CCTTCCCCSEEEC-TTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEEST-TTSSCEEEEEEEETTEEEE
T ss_pred CCccccCCcEecC-CCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeec-CCCCCccEEEECCCCcEEE
Confidence 00 001111 112468899998 4899999743 333333322201111111222 23456889999 8999999
Q ss_pred E--EecCcccc
Q 020019 310 N--HMLGFGYP 318 (332)
Q Consensus 310 ~--~~~g~~~~ 318 (332)
+ +.-|...|
T Consensus 324 ~td~~~g~g~p 334 (347)
T 3das_A 324 VTSNTDGRGDA 334 (347)
T ss_dssp EECTTSSSSCC
T ss_pred EEcCCCCCCCC
Confidence 4 34444445
No 55
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.71 E-value=4.9e-15 Score=147.85 Aligned_cols=214 Identities=12% Similarity=0.111 Sum_probs=151.8
Q ss_pred cCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecC
Q 020019 64 LDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLS 143 (332)
Q Consensus 64 ~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~ 143 (332)
....|.+++.++... + ..+.-++. ..|.||++|+.+++||+++.. .++|.+++++.......+..
T Consensus 13 ~~~~I~~i~l~~~~~-----~--~~~~~~~~--~~~~~l~~d~~~~~lywtD~~-----~~~I~r~~~~g~~~~~v~~~- 77 (628)
T 4a0p_A 13 RRADIRRISLETNNN-----N--VAIPLTGV--KEASALDFDVTDNRIYWTDIS-----LKTISRAFMNGSALEHVVEF- 77 (628)
T ss_dssp ETTEEEEEESSCTTC-----E--EECCCCSC--SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECS-
T ss_pred eCCcEEEEECCCCCc-----c--eEEEcCCC--CceEEEEEECCCCEEEEEECC-----CCeEEEEECCCCCcEEEEeC-
Confidence 467899999986542 1 22222232 378999999988999999873 46799999876554433322
Q ss_pred CCCCCCCCccceEECCC-CcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccC-ceEEEEeCC-
Q 020019 144 GPSDGKSCADDVTVDAE-GNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPD-GFLIVIHTF- 220 (332)
Q Consensus 144 ~~~~~~~~~ndiavd~d-G~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~d-G~Lyva~~~- 220 (332)
+...|.|+|+|.. |+||++|+..++|.+++.+|+....+... .+..|++|+++|. |.||++++.
T Consensus 78 ----g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~---------~l~~P~~iavdp~~G~lY~tD~g~ 144 (628)
T 4a0p_A 78 ----GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWK---------DLDSPRALALDPAEGFMYWTEWGG 144 (628)
T ss_dssp ----SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECS---------SCCCEEEEEEETTTTEEEEEECSS
T ss_pred ----CCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeC---------CCCCcccEEEccCCCeEEEeCCCC
Confidence 2467999999976 68999999999999999998754433222 2346889999985 699999986
Q ss_pred CCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCC-CeEEEEeCCceE-EEEcCCCceEEEEEeeecCCCcccce
Q 020019 221 SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSP-TKLVVAGNPSAR-LVESSDGWETAAVVAKFSGPVHRLAT 298 (332)
Q Consensus 221 ~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~d-G~l~va~~~~~~-~v~~~dg~~~~~~~~~~~~~~~~~pt 298 (332)
.++|+|+++++. ..+.+. . .+..|.||++|++ ++||+++..... .....+|... ++... .+..|.
T Consensus 145 ~~~I~r~~~dG~-----~~~~l~-~--~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~----~l~~P~ 211 (628)
T 4a0p_A 145 KPKIDRAAMDGS-----ERTTLV-P--NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIAD----DLPHPF 211 (628)
T ss_dssp SCEEEEEETTSC-----SCEEEE-C--SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEE----CCSCEE
T ss_pred CCEEEEEeCCCC-----ceEEEE-C--CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeec----cCCCce
Confidence 789999999854 233332 2 4678999999985 899999854322 2344455222 33322 367799
Q ss_pred EEEEECCeEEEEEecCcccc
Q 020019 299 AATVKDGRVYLNHMLGFGYP 318 (332)
Q Consensus 299 ~va~~~g~lyv~~~~g~~~~ 318 (332)
++++.+++||++++....+.
T Consensus 212 glav~~~~ly~tD~~~~~I~ 231 (628)
T 4a0p_A 212 GLTQYQDYIYWTDWSRRSIE 231 (628)
T ss_dssp EEEEETTEEEEEETTTTEEE
T ss_pred EEEEECCEEEEecCCCCEEE
Confidence 99998899999887655543
No 56
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.71 E-value=6.3e-15 Score=150.28 Aligned_cols=216 Identities=14% Similarity=0.115 Sum_probs=147.6
Q ss_pred CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcE--EEEEec
Q 020019 65 DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNR--LFLTQL 142 (332)
Q Consensus 65 ~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~--~~~~~l 142 (332)
...|.+++.+...+ . .+.. .+ ..+.||++|..+++||+++.. ..+|++++++.... .....+
T Consensus 403 ~~~Ir~i~l~~~~~-----~--~l~~--~~--~~~~gl~~d~~~~~lY~sD~~-----~~~I~~~~l~g~~~~~~~~~vi 466 (791)
T 3m0c_C 403 RHEVRKMTLDRSEY-----T--SLIP--NL--RNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVI 466 (791)
T ss_dssp BSSEEEECTTSCCC-----E--EEEC--SC--SSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEE
T ss_pred ccceeEeeccCCcc-----e--eeec--CC--CceEEEeecccCCeeEEeecc-----ceeEEEEeccCCCCCcceeEEE
Confidence 35789998875543 1 2332 22 378999999877999999874 45788888864221 111112
Q ss_pred CCCCCCCCCccceEECCCC-cEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccC-ceEEEEeCC
Q 020019 143 SGPSDGKSCADDVTVDAEG-NAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPD-GFLIVIHTF 220 (332)
Q Consensus 143 ~~~~~~~~~~ndiavd~dG-~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~d-G~Lyva~~~ 220 (332)
......|.+||+|..+ +||++|+..++|++++.+|+....+.... +..|+||++++. |+|||+++.
T Consensus 467 ---~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~---------l~~P~gIaVDp~~g~LYwtD~g 534 (791)
T 3m0c_C 467 ---SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN---------GSKPRAIVVDPVHGFMYWTDWG 534 (791)
T ss_dssp ---CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT---------TCCEEEEEEETTTTEEEEEECS
T ss_pred ---ecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCC---------CCCcceEEEecCCCCEEEecCC
Confidence 1124689999999875 89999999999999999988655443222 345789999997 599999988
Q ss_pred C-CeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEe-CCCeEEEEeCCce-EEEEcCCCceEEEEEeeecCCCcccc
Q 020019 221 S-GNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELL-SPTKLVVAGNPSA-RLVESSDGWETAAVVAKFSGPVHRLA 297 (332)
Q Consensus 221 ~-~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~-~dG~l~va~~~~~-~~v~~~dg~~~~~~~~~~~~~~~~~p 297 (332)
. ++|+++++++. ..+.+. . ..+..|.||++| .+++||+++.... ..+...+|.....+... ...+..|
T Consensus 535 ~~~~I~~~~~dG~-----~~~~lv-~-~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~--~~~l~~P 605 (791)
T 3m0c_C 535 TPAKIKKGGLNGV-----DIYSLV-T-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED--EKRLAHP 605 (791)
T ss_dssp SSCEEEEEETTSC-----CEEEEE-C-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC--TTTTSSE
T ss_pred CCCeEEEEecCCC-----ceEEEE-e-CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecC--CCccCCC
Confidence 6 89999999854 233332 2 356789999999 4699999985432 22344566333333322 1246778
Q ss_pred eEEEEECCeEEEEEecCccc
Q 020019 298 TAATVKDGRVYLNHMLGFGY 317 (332)
Q Consensus 298 t~va~~~g~lyv~~~~g~~~ 317 (332)
.++++.+++||++++....+
T Consensus 606 ~glav~~~~lYwtD~~~~~I 625 (791)
T 3m0c_C 606 FSLAVFEDKVFWTDIINEAI 625 (791)
T ss_dssp EEEEEETTEEEEEETTTTEE
T ss_pred CEEEEeCCEEEEEECCCCEE
Confidence 88999899999987665544
No 57
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.70 E-value=1.6e-15 Score=138.80 Aligned_cols=191 Identities=13% Similarity=0.094 Sum_probs=135.3
Q ss_pred cccceEEcC-CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecc-cCcCCCccceEEEeC-CCCeEEEEEeCcC---
Q 020019 46 FRECAKWDD-SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKD-LELTGNGSLGLVLDH-PRNRLLVVAADVF--- 119 (332)
Q Consensus 46 ~pegia~d~-~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gi~vd~-~~g~l~v~~~~~~--- 119 (332)
.|.++++++ +|++|+++.. +.|+++++++++. + .+... .+.....|++|++++ + |++|+++....
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g~~-----~--~~~~~~~~~~~~~p~~i~~d~~~-G~l~v~d~~~~~~~ 151 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCY-YHLSVVGSEGGHA-----T--QLATSVDGVPFKWLYAVTVDQRT-GIVYFTDVSTLYDD 151 (322)
T ss_dssp CEEEEEEETTTTEEEEEETT-TEEEEECTTCEEC-----E--EEESEETTEECSCEEEEEECTTT-CCEEEEESCSSCCT
T ss_pred CCceEEEcCCCCcEEEEECC-CCEEEEeCCCCEE-----E--EecccCCCCcccccceEEEecCC-CEEEEECCcccccc
Confidence 588999997 8888888754 4599999875542 1 22211 111113689999999 6 99999986410
Q ss_pred ---------CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCCCc----eEEE
Q 020019 120 ---------GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVKGE----FLSI 185 (332)
Q Consensus 120 ---------~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~g~----~~~~ 185 (332)
....+.|++||+++++...... ....||+++++++|+ +||+|+..++|++++.++. ...+
T Consensus 152 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~------~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~ 225 (322)
T 2fp8_A 152 RGVQQIMDTSDKTGRLIKYDPSTKETTLLLK------ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVL 225 (322)
T ss_dssp TCHHHHHHHTCCCEEEEEEETTTTEEEEEEE------EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEE
T ss_pred cccceehcccCCCceEEEEeCCCCEEEEecc------CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceE
Confidence 0123679999998777543321 135789999999986 9999999999999998752 2222
Q ss_pred ecCCCCCCcccccCccccCeEEEccCceEEEEeCC----------CCeEEEEeCCCCCCccceeEEEEec-CCCCCCCCe
Q 020019 186 ISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTF----------SGNLFKIDIVDGVGEGEEIKLIRVA-GGPLSFGDG 254 (332)
Q Consensus 186 ~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~----------~~~i~~id~~~~~~~~~~~~~v~~~-g~~~~~pdG 254 (332)
.. . .+|+||+++++|+|||++.. .++|++++++.. .+..+..+ |..+..|.+
T Consensus 226 ~~---~---------~gP~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~-----~~~~~~~~~g~~~~~~~~ 288 (322)
T 2fp8_A 226 VK---I---------PNPGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGN-----ILEVIPLPPPFAGEHFEQ 288 (322)
T ss_dssp EE---C---------SSEEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSC-----EEEEEECCTTTTTSCCCE
T ss_pred Ee---C---------CCCCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCC-----EEEEEECCCCCccccceE
Confidence 11 1 12899999999999999976 578999998733 55556654 222567888
Q ss_pred EEEeCCCeEEEEeCC
Q 020019 255 LELLSPTKLVVAGNP 269 (332)
Q Consensus 255 i~~~~dG~l~va~~~ 269 (332)
++.+ +|+|||++..
T Consensus 289 ~~~~-~g~L~v~~~~ 302 (322)
T 2fp8_A 289 IQEH-DGLLYIGTLF 302 (322)
T ss_dssp EEEE-TTEEEEECSS
T ss_pred EEEe-CCEEEEeecC
Confidence 8774 7999999743
No 58
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.69 E-value=1.1e-14 Score=129.67 Aligned_cols=191 Identities=16% Similarity=0.137 Sum_probs=135.3
Q ss_pred ccccceEEcCCCCEEEEEe--cCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 45 FFRECAKWDDSGRRFIVSF--LDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~--~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
.+|+|++++++|.+|+++- ..++|.++|+.+++ +.. ++. -+. ...+.|++++. ++||+++..
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~----v~~--~i~-l~~--~~fgeGi~~~g--~~lyv~t~~----- 84 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK----VEN--IHK-MDD--SYFGEGLTLLN--EKLYQVVWL----- 84 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC----EEE--EEE-CCT--TCCEEEEEEET--TEEEEEETT-----
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC----EEE--EEe-cCC--CcceEEEEEeC--CEEEEEEec-----
Confidence 3789999999988887762 36899999999887 223 221 111 11445788874 799999863
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCC-cEEEEeCCCCeEEEEcCCC-ceEEEecCCCCCCcccccCc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEG-NAYVTDVTGSKIWKVGVKG-EFLSIISSPLFTPKEWYKNL 200 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG-~lyvtd~~~~~I~~v~~~g-~~~~~~~~~~~~~p~~~~~~ 200 (332)
.+.+.+||.+++++...+... .+.+..+.+|| .+|+++ +.+.|+.+|++. +....+....... ..
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g-------~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~-----p~ 151 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQ-------MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGH-----RV 151 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECC-------SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTE-----EC
T ss_pred CCEEEEEECCCCcEEEEEECC-------CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCc-----cc
Confidence 467999999999887766552 12345555565 699999 689999999985 4333322111011 12
Q ss_pred cccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecC----------CCCCCCCeEEEeCC-CeEEEEeCC
Q 020019 201 VGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAG----------GPLSFGDGLELLSP-TKLVVAGNP 269 (332)
Q Consensus 201 ~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g----------~~~~~pdGi~~~~d-G~l~va~~~ 269 (332)
..+|++++. ||+||++.+.++.|.+||+.+++ .+..+.+++ .....|.||+++++ .++||++..
T Consensus 152 ~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~----V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 152 IRLNELEYI-NGEVWANIWQTDCIARISAKDGT----LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEEETTTCC----EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred ccceeEEEE-CCEEEEecCCCCeEEEEECCCCc----EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 358999998 88999999999999999999883 567777642 01246789999998 479999844
No 59
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.69 E-value=6e-15 Score=133.43 Aligned_cols=193 Identities=10% Similarity=0.032 Sum_probs=136.9
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecc-cCcCCCccceEEEeCCCCeEEEEEeCcCC---
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKD-LELTGNGSLGLVLDHPRNRLLVVAADVFG--- 120 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gi~vd~~~g~l~v~~~~~~~--- 120 (332)
..|.+++++++|++|++. .+.|+++++++++. + .+... .+...+.++++++|++ |++|+++.....
T Consensus 54 ~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~-----~--~~~~~~~~~~~~~~~di~~d~d-G~l~~~~~~~~~~~~ 123 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI--GTKFCALNWKEQSA-----V--VLATVDNDKKNNRFNDGKVDPA-GRYFAGTMAEETAPA 123 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEE-----E--EEEECCTTCSSEEEEEEEECTT-SCEEEEEEECCSBTT
T ss_pred CceEEEEECCCCCEEEEE--CCeEEEEECCCCcE-----E--EEEecCCCCCCCCCCCEEECCC-CCEEEecCCcccccc
Confidence 468899999999977765 57899999886652 2 22221 1112246899999996 999998754210
Q ss_pred ---CccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcC---CCceE--E-EecCCC
Q 020019 121 ---NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGV---KGEFL--S-IISSPL 190 (332)
Q Consensus 121 ---~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~---~g~~~--~-~~~~~~ 190 (332)
...+.|+++|.+ ++...... ....||++++++||+ +|++++..+.|++++. +|+.. + +.....
T Consensus 124 ~~~~~~~~l~~~d~~-g~~~~~~~------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~ 196 (297)
T 3g4e_A 124 VLERHQGALYSLFPD-HHVKKYFD------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK 196 (297)
T ss_dssp BCCTTCEEEEEECTT-SCEEEEEE------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG
T ss_pred cccCCCcEEEEEECC-CCEEEEee------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC
Confidence 124578889875 45443221 135789999999985 9999999999999874 45532 1 111110
Q ss_pred CCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEe-CC-CeEEEEeC
Q 020019 191 FTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELL-SP-TKLVVAGN 268 (332)
Q Consensus 191 ~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~-~d-G~l~va~~ 268 (332)
....|+|++++++|+||+++..+++|+++++++++ .+..+..+ ...|..+++. +| ++|||+..
T Consensus 197 --------~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~----~~~~i~~p---~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 197 --------EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK----RLQTVKLP---VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp --------GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC----EEEEEECS---SSBEEEEEEESGGGCEEEEEEB
T ss_pred --------CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce----EEEEEECC---CCCceEEEEeCCCCCEEEEEcC
Confidence 12468999999999999999999999999998773 45666654 2568899997 66 57999975
Q ss_pred C
Q 020019 269 P 269 (332)
Q Consensus 269 ~ 269 (332)
.
T Consensus 262 ~ 262 (297)
T 3g4e_A 262 R 262 (297)
T ss_dssp C
T ss_pred C
Confidence 4
No 60
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.68 E-value=2.2e-14 Score=131.56 Aligned_cols=248 Identities=11% Similarity=0.148 Sum_probs=150.9
Q ss_pred CCccccceEEcCCCCEEEEEec--CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCC
Q 020019 43 SSFFRECAKWDDSGRRFIVSFL--DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG 120 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~~~--~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~ 120 (332)
....|.+++++++|++|+++.. ++.|+.++.++++. + .+......+..|.+++++++...||++...
T Consensus 38 ~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~-----~---~~~~~~~~~~~p~~~a~spdg~~l~~~~~~--- 106 (347)
T 3hfq_A 38 ATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTA-----H---KLNTVVAPGTPPAYVAVDEARQLVYSANYH--- 106 (347)
T ss_dssp ECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEE-----E---EEEEEEEESCCCSEEEEETTTTEEEEEETT---
T ss_pred ccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcE-----E---EeeeeecCCCCCEEEEECCCCCEEEEEeCC---
Confidence 3457899999999996666643 57899998865542 1 111100112378999999974457887642
Q ss_pred CccceEEEEECC-CCcEEEEEecCCCCC------CCCCccceEECCCCcEEEEeCCCCeEEEEcCC--CceEEEecCCCC
Q 020019 121 NKYSAVAAYDLS-TWNRLFLTQLSGPSD------GKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK--GEFLSIISSPLF 191 (332)
Q Consensus 121 ~~~~~l~~~d~~-~g~~~~~~~l~~~~~------~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~--g~~~~~~~~~~~ 191 (332)
.+.+.+||.+ +++......+..... ....+++++++|+|++|+++...+.|+.++.+ |+........ .
T Consensus 107 --~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~-~ 183 (347)
T 3hfq_A 107 --KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLT-M 183 (347)
T ss_dssp --TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEE-C
T ss_pred --CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEE-c
Confidence 3568888874 445443333311111 12357889999999999999998988777654 5543321100 0
Q ss_pred CCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCC--CCCccceeEEEEecCCC---CCCCCeEEEeCCCe-EE
Q 020019 192 TPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVD--GVGEGEEIKLIRVAGGP---LSFGDGLELLSPTK-LV 264 (332)
Q Consensus 192 ~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~--~~~~~~~~~~v~~~g~~---~~~pdGi~~~~dG~-l~ 264 (332)
....+|++++|+||| .||+++...++|..++++. ++. ..+..+...... ...|.++++++||+ ||
T Consensus 184 ------~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~ 255 (347)
T 3hfq_A 184 ------EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAF--TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLY 255 (347)
T ss_dssp ------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE--EEEEEEESSCTTCCSCCEEEEEEECTTSCEEE
T ss_pred ------CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCce--EEeeeeeecCCCCCCCCcceeEEECCCCCEEE
Confidence 012357899999999 7999999889887776653 411 112222211001 13478899999997 78
Q ss_pred EEeC--CceEEEEcC-CCceEEEEEeeecCCCcccceEEEE-EC-CeEEEEEecCc
Q 020019 265 VAGN--PSARLVESS-DGWETAAVVAKFSGPVHRLATAATV-KD-GRVYLNHMLGF 315 (332)
Q Consensus 265 va~~--~~~~~v~~~-dg~~~~~~~~~~~~~~~~~pt~va~-~~-g~lyv~~~~g~ 315 (332)
+++. ....+.... +| .. +....+... ...|.++++ .+ +.||+++....
T Consensus 256 v~~~~~~~v~v~~~~~~g-~~-~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~ 308 (347)
T 3hfq_A 256 VSNRGYNTLAVFAVTADG-HL-TLIQQISTE-GDFPRDFDLDPTEAFVVVVNQNTD 308 (347)
T ss_dssp EEEETTTEEEEEEECGGG-CE-EEEEEEECS-SSCCCEEEECTTSSEEEEEETTTT
T ss_pred EEeCCCCEEEEEEECCCC-cE-EEeEEEecC-CCCcCeEEECCCCCEEEEEEcCCC
Confidence 8864 333333332 33 22 333333321 346889999 44 46888776543
No 61
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.68 E-value=3e-14 Score=128.18 Aligned_cols=201 Identities=10% Similarity=0.011 Sum_probs=140.7
Q ss_pred cCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecc-cCcCCCccceEEEeCCCCeEEEEEeCcC-
Q 020019 42 SSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKD-LELTGNGSLGLVLDHPRNRLLVVAADVF- 119 (332)
Q Consensus 42 ~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gi~vd~~~g~l~v~~~~~~- 119 (332)
.....|.+++++++|++|++....+.|+++++.+++. + .+... .+.....+++++++++ |++|+++...+
T Consensus 66 ~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~-----~--~~~~~~~~~~~~~~~~i~~d~~-G~l~vtd~~~g~ 137 (296)
T 3e5z_A 66 HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW-----E--SIADSFEGKKLNSPNDVCLAPD-GSLWFSDPTYGI 137 (296)
T ss_dssp SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE-----E--EEECEETTEECCCCCCEEECTT-SCEEEEECSHHH
T ss_pred CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE-----E--EEeeccCCCCCCCCCCEEECCC-CCEEEECCcccc
Confidence 3444789999999999988876678999999866652 1 22211 1112236889999996 99999864210
Q ss_pred -----------CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC--Cce---E
Q 020019 120 -----------GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK--GEF---L 183 (332)
Q Consensus 120 -----------~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~--g~~---~ 183 (332)
....+.|++++++ ++..... .....|++++++++|+++++++..+.|++++.+ |+. .
T Consensus 138 ~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~------~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~ 210 (296)
T 3e5z_A 138 DKPEEGYGGEMELPGRWVFRLAPD-GTLSAPI------RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQG 210 (296)
T ss_dssp HCGGGSSCCCCCSSSCEEEEECTT-SCEEEEE------CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEE
T ss_pred ccccccccccccCCCcEEEEECCC-CCEEEee------cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCC
Confidence 0113478999887 6654322 124678999999999877999999999998864 554 2
Q ss_pred EEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEe-CCC-
Q 020019 184 SIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELL-SPT- 261 (332)
Q Consensus 184 ~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~-~dG- 261 (332)
..+ .. ....|+||+++++|+||++. .+.|+++++++. .+..+..+. . |..++++ ++|
T Consensus 211 ~~~-~~---------~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~-----~~~~~~~~~---~-~~~~~f~~~d~~ 269 (296)
T 3e5z_A 211 VHF-TV---------EPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGD-----ELGRVLTPQ---T-TSNLCFGGPEGR 269 (296)
T ss_dssp EEE-CC---------SSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSC-----EEEEEECSS---C-CCEEEEESTTSC
T ss_pred eEe-eC---------CCCCCCeEEECCCCCEEEEc--CCeEEEECCCCC-----EEEEEECCC---C-ceeEEEECCCCC
Confidence 222 11 12457899999999999999 778999998733 555565541 3 8899995 664
Q ss_pred eEEEEeCCceEEEEcCC
Q 020019 262 KLVVAGNPSARLVESSD 278 (332)
Q Consensus 262 ~l~va~~~~~~~v~~~d 278 (332)
.||++.....+.+...+
T Consensus 270 ~L~v~t~~~l~~~~~~~ 286 (296)
T 3e5z_A 270 TLYMTVSTEFWSIETNV 286 (296)
T ss_dssp EEEEEETTEEEEEECSC
T ss_pred EEEEEcCCeEEEEEccc
Confidence 69999877655444443
No 62
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.65 E-value=8.1e-14 Score=129.82 Aligned_cols=258 Identities=16% Similarity=0.174 Sum_probs=167.8
Q ss_pred cCCccccceEEc-CCCCEEEEEe-c-C---CeEEEEECCCC-----CCCccceeeeEE-ecccCcC-C---CccceEEEe
Q 020019 42 SSSFFRECAKWD-DSGRRFIVSF-L-D---GGIGQVAVPDD-----YPPGTVLEEVTL-VKDLELT-G---NGSLGLVLD 105 (332)
Q Consensus 42 ~~~~~pegia~d-~~g~~~~~~~-~-~---g~I~~vd~~~~-----~~~~~~~~~~~~-~~~~~~~-~---~~~~gi~vd 105 (332)
.....|-|+++| .+|++|++-. + . -+|..++.++. ..+ .+ ..-|+.. + .+++++.+|
T Consensus 23 p~n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p-------~ll~PYP~w~~~~~lvsV~~v~iD 95 (381)
T 3q6k_A 23 PDNMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHS-------PLLNKFSGHKTGKELTSIYQPVID 95 (381)
T ss_dssp GGGCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSS-------CCBEECTTCSSSCSSSCEEEEEEC
T ss_pred cCccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCc-------ccccCCCCCccccceEEeeEEEEc
Confidence 344588999994 8898887763 2 2 26888875421 110 12 2223321 1 378999999
Q ss_pred CCCCeEEEEEeCcCC----------CccceEEEEECCCC--cEEEEEecCCC-CCCCCCccceEEC-C-------CCcEE
Q 020019 106 HPRNRLLVVAADVFG----------NKYSAVAAYDLSTW--NRLFLTQLSGP-SDGKSCADDVTVD-A-------EGNAY 164 (332)
Q Consensus 106 ~~~g~l~v~~~~~~~----------~~~~~l~~~d~~~g--~~~~~~~l~~~-~~~~~~~ndiavd-~-------dG~ly 164 (332)
+. |+|||.|.+... ....+|.+||++++ +++.++.++.. ....++.|++++| . ++.+|
T Consensus 96 ~~-~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aY 174 (381)
T 3q6k_A 96 DC-RRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVY 174 (381)
T ss_dssp TT-CEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEE
T ss_pred CC-CcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEE
Confidence 95 999999976321 12358999999999 99999988532 1234789999999 2 34599
Q ss_pred EEeCCCCeEEEEcCC-CceEEEecCCCCCC-cc---c-----ccCccccCeEEEccC----c-eEEEEeCCCCeEEEEeC
Q 020019 165 VTDVTGSKIWKVGVK-GEFLSIISSPLFTP-KE---W-----YKNLVGLNGIVYHPD----G-FLIVIHTFSGNLFKIDI 229 (332)
Q Consensus 165 vtd~~~~~I~~v~~~-g~~~~~~~~~~~~~-p~---~-----~~~~~~~nGi~~~~d----G-~Lyva~~~~~~i~~id~ 229 (332)
+||+..+.|.++|.. |+.-++.+ ..+.. +. . ..-..+.+||+++|+ + +||+.-..+.++|+|+.
T Consensus 175 ItD~~~~gLIVydl~~~~swRv~~-~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T 253 (381)
T 3q6k_A 175 ITNFLRGALFIYDHKKQDSWNVTH-PTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNT 253 (381)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEC-GGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEH
T ss_pred EEcCCCCcEEEEECCCCcEEEEcc-CCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEH
Confidence 999999999999976 66555553 22221 11 0 011358999999998 6 99999999999999985
Q ss_pred C---CCCCccceeEEEEecCCCCCCCC--eEEEe-CCCeEEEEeCC-ceEEEEcCCC-----ceEEEEEeeecCCCcccc
Q 020019 230 V---DGVGEGEEIKLIRVAGGPLSFGD--GLELL-SPTKLVVAGNP-SARLVESSDG-----WETAAVVAKFSGPVHRLA 297 (332)
Q Consensus 230 ~---~~~~~~~~~~~v~~~g~~~~~pd--Gi~~~-~dG~l~va~~~-~~~~v~~~dg-----~~~~~~~~~~~~~~~~~p 297 (332)
+ .+... ..++.+-.. .+..+ ++++| .+|+||++.-. .......+++ .....+.. .+.+.||
T Consensus 254 ~~L~~~~~~-~~v~~~G~k---g~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~---d~~l~~p 326 (381)
T 3q6k_A 254 KELKQKGGK-LNPELLGNR---GKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYT---SSRFVFG 326 (381)
T ss_dssp HHHSSTTCC-CCCEEEEEC---CTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEE---CTTCCSE
T ss_pred HHhhCcchh-hceEEeeec---CCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEE---CCCcccc
Confidence 3 33221 133333221 12245 56776 78999999733 2222333433 12233433 3579999
Q ss_pred eEEEE-ECCeEEE-EEecCc
Q 020019 298 TAATV-KDGRVYL-NHMLGF 315 (332)
Q Consensus 298 t~va~-~~g~lyv-~~~~g~ 315 (332)
+++.+ .+|.||| ++++..
T Consensus 327 d~~~i~~~g~Lwv~sn~l~~ 346 (381)
T 3q6k_A 327 TDISVDSKGGLWFMSNGFPP 346 (381)
T ss_dssp EEEEECTTSCEEEEECSCCS
T ss_pred CeEEECCCCeEEEEECcchH
Confidence 99999 7899998 666543
No 63
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.65 E-value=4.8e-14 Score=128.18 Aligned_cols=194 Identities=11% Similarity=0.062 Sum_probs=131.6
Q ss_pred CccccceEEcCCCCEEEEEecC--CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCC
Q 020019 44 SFFRECAKWDDSGRRFIVSFLD--GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGN 121 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~~~~~--g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~ 121 (332)
+..|.+++++++|++|+++... .+|++++..+++. + .+...+. ...+.|+++.+. +++|+++..
T Consensus 71 ~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~-----~--~~~~~~~--~~~~~g~~~~~~-~~~~v~d~~---- 136 (306)
T 2p4o_A 71 EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV-----E--TLLTLPD--AIFLNGITPLSD-TQYLTADSY---- 136 (306)
T ss_dssp SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE-----E--EEEECTT--CSCEEEEEESSS-SEEEEEETT----
T ss_pred CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE-----E--EEEeCCC--ccccCcccccCC-CcEEEEECC----
Confidence 3479999999999998888443 3699998776652 2 2332222 235788888764 889998752
Q ss_pred ccceEEEEECCCCcEEEEE-e--cC--CCCCCCCCccceEECCCC-cEEEEeCCCCeEEEEcCCC--ceEEEecCCCCCC
Q 020019 122 KYSAVAAYDLSTWNRLFLT-Q--LS--GPSDGKSCADDVTVDAEG-NAYVTDVTGSKIWKVGVKG--EFLSIISSPLFTP 193 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~-~--l~--~~~~~~~~~ndiavd~dG-~lyvtd~~~~~I~~v~~~g--~~~~~~~~~~~~~ 193 (332)
.+.|+++|+.+++..... . +. .+......||++ +++| .+|++|+..++|++++.++ +... ...+
T Consensus 137 -~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~---~~~~-- 208 (306)
T 2p4o_A 137 -RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGE---PEIF-- 208 (306)
T ss_dssp -TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCC---CEEE--
T ss_pred -CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCc---cEEE--
Confidence 457999998765422211 1 10 111224679998 6665 6999999999999999873 3210 0000
Q ss_pred cccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEe---CC-CeEEEEeCC
Q 020019 194 KEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELL---SP-TKLVVAGNP 269 (332)
Q Consensus 194 p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~---~d-G~l~va~~~ 269 (332)
.....|+||+++++|+|||++..+++|++|+++ ++ ........ .++..|.+++++ +| +.|||++..
T Consensus 209 ----~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~----~~~~~~~~-~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 209 ----VEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RS----TTIIAQAE-QGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ----EESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CC----EEEEECGG-GTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred ----eccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CC----EEEEeecc-cccCCceEEEEecccCCCCEEEEECCC
Confidence 012468999999999999999999999999987 41 22211222 235679999998 67 789999854
No 64
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.65 E-value=2.5e-13 Score=123.25 Aligned_cols=240 Identities=10% Similarity=0.120 Sum_probs=149.6
Q ss_pred CccccceEEcCCCCE-EEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccce-EEEeCCCCeEEEEEeCcCCC
Q 020019 44 SFFRECAKWDDSGRR-FIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLG-LVLDHPRNRLLVVAADVFGN 121 (332)
Q Consensus 44 ~~~pegia~d~~g~~-~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-i~vd~~~g~l~v~~~~~~~~ 121 (332)
...| +++++++|+. |+++..+++|++++..+++. .. ..... +..+.. ++++++...+| +..+..
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~----~~--~~~~~----~~~~~~~~~~s~dg~~l~-~~~~~~-- 105 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP----KV--VAIQE----GQSSMADVDITPDDQFAV-TVTGLN-- 105 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC----EE--EEEEE----CSSCCCCEEECTTSSEEE-ECCCSS--
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce----eE--Eeccc----CCCCccceEECCCCCEEE-EecCCC--
Confidence 3356 9999999984 44556678999999987752 01 12211 125666 99999734455 433210
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCe---EEEEcCCCceEEEecCCCCCCcccc
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSK---IWKVGVKGEFLSIISSPLFTPKEWY 197 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~---I~~v~~~g~~~~~~~~~~~~~p~~~ 197 (332)
....|.+||.++++....... ...|++++++|+|+ +|+++...+. +|.++.+|+..... ....
T Consensus 106 ~~~~i~v~d~~~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~------ 172 (331)
T 3u4y_A 106 HPFNMQSYSFLKNKFISTIPI------PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-QEFI------ 172 (331)
T ss_dssp SSCEEEEEETTTTEEEEEEEC------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-EEEE------
T ss_pred CcccEEEEECCCCCeEEEEEC------CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-Cccc------
Confidence 112799999998887665443 24578999999996 9999887666 55555556543221 0000
Q ss_pred cCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeCCc--eEE
Q 020019 198 KNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGNPS--ARL 273 (332)
Q Consensus 198 ~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~~~--~~~ 273 (332)
.....+.+++++||| +||++....++|+.+++.+++.. +.+..+... ..|.++++++||+ ||+++... ..+
T Consensus 173 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~~~----~~~~~~~~spdg~~l~v~~~~~~~i~~ 247 (331)
T 3u4y_A 173 SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI-TLLNAVGTN----NLPGTIVVSRDGSTVYVLTESTVDVFN 247 (331)
T ss_dssp CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC-EEEEEEECS----SCCCCEEECTTSSEEEEECSSEEEEEE
T ss_pred cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc-ceeeeccCC----CCCceEEECCCCCEEEEEEcCCCEEEE
Confidence 122457899999999 79999999999999999876310 014444422 5788999999988 78886432 334
Q ss_pred EEcCCCceEEEEEeeecC----CC-cccceEEEE--ECCeEEEEEecCcc
Q 020019 274 VESSDGWETAAVVAKFSG----PV-HRLATAATV--KDGRVYLNHMLGFG 316 (332)
Q Consensus 274 v~~~dg~~~~~~~~~~~~----~~-~~~pt~va~--~~g~lyv~~~~g~~ 316 (332)
+...++ +...+...... +. ......+++ ++.+||+++..+..
T Consensus 248 ~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 296 (331)
T 3u4y_A 248 FNQLSG-TLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRE 296 (331)
T ss_dssp EETTTT-EEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTE
T ss_pred EECCCC-ceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCc
Confidence 445556 33222211111 11 111234677 45678887765533
No 65
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.64 E-value=3.5e-14 Score=132.13 Aligned_cols=250 Identities=13% Similarity=0.115 Sum_probs=149.0
Q ss_pred cccceEEcCCCC-EEEEEecCCeEEEEECCCCCCCccceeeeEEecccCc--C-CCccceEEEeCC---CCeEEEEEeCc
Q 020019 46 FRECAKWDDSGR-RFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLEL--T-GNGSLGLVLDHP---RNRLLVVAADV 118 (332)
Q Consensus 46 ~pegia~d~~g~-~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~gi~vd~~---~g~l~v~~~~~ 118 (332)
.|.+++++++|+ +|++.. .|+|++++.++... + .+...+.. . ..++.||+++|+ +++||++....
T Consensus 19 ~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~g~~~-----~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~ 90 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLR-GGELRHWQAGKGLS-----A--PLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEV 90 (353)
T ss_dssp SEEEEEECSTTCCEEEEET-TTEEEEEETTTEEC-----C--CCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEE
T ss_pred CcEEEEEcCCCCEEEEEeC-CceEEEEeCCCcee-----e--EecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCC
Confidence 899999999999 888775 59999999753211 1 11111111 1 136899999995 69999997531
Q ss_pred CCC--ccceEEEEECCCC--cEEE---EE-ecCCCCCCCCCccceEECCCCcEEEEeC-------------CCCeEEEEc
Q 020019 119 FGN--KYSAVAAYDLSTW--NRLF---LT-QLSGPSDGKSCADDVTVDAEGNAYVTDV-------------TGSKIWKVG 177 (332)
Q Consensus 119 ~~~--~~~~l~~~d~~~g--~~~~---~~-~l~~~~~~~~~~ndiavd~dG~lyvtd~-------------~~~~I~~v~ 177 (332)
... ...+|.+|+.+.+ ++.. .+ .++......+++++|+++|||.|||+.. ..++|+|++
T Consensus 91 ~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 91 GDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp CSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred CCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 100 1356888877543 2221 12 2321012346789999999999999953 247899999
Q ss_pred CCCceEEEecCCCCC------CcccccCccccCeEEEcc-CceEEEEeCCCC---eEEEEeCCCCCC-----cc------
Q 020019 178 VKGEFLSIISSPLFT------PKEWYKNLVGLNGIVYHP-DGFLIVIHTFSG---NLFKIDIVDGVG-----EG------ 236 (332)
Q Consensus 178 ~~g~~~~~~~~~~~~------~p~~~~~~~~~nGi~~~~-dG~Lyva~~~~~---~i~~id~~~~~~-----~~------ 236 (332)
++|+... .++ |. ......++.+|.||++++ +|+||+++...+ +|.+|... +.. +.
T Consensus 171 ~dG~~p~--~np-f~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G-~nyGwp~~~~~~~~~~ 246 (353)
T 2g8s_A 171 DQGEIPD--DNP-FIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKG-KNYGWPLATWGINYSG 246 (353)
T ss_dssp TTSCCCT--TCT-TTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTT-CBCCTTTBCSSBCTTS
T ss_pred CCCCCCC--CCC-CcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccC-CcCCCCCccCCCCCCC
Confidence 9987321 111 11 011223456799999999 679999998753 55555332 110 00
Q ss_pred ------------cee-EEEEecCCCCCCCCeEEEeC-------CCeEEEEeCCc--eEEEEcCCCceEEEEEeeecCCCc
Q 020019 237 ------------EEI-KLIRVAGGPLSFGDGLELLS-------PTKLVVAGNPS--ARLVESSDGWETAAVVAKFSGPVH 294 (332)
Q Consensus 237 ------------~~~-~~v~~~g~~~~~pdGi~~~~-------dG~l~va~~~~--~~~v~~~dg~~~~~~~~~~~~~~~ 294 (332)
... ..+... +...|.||++.. +|++|+++... ++.+...++ +.......+. ...
T Consensus 247 ~~~~~~~~~~~~~~~~P~~~~~--~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~-~~~ 322 (353)
T 2g8s_A 247 FKIPEAKGEIVAGTEQPVFYWK--DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD-KVTEDGRILT-DRG 322 (353)
T ss_dssp SCCTTCCBSSCTTSCCCSEEES--SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT-EEEEEEEESG-GGC
T ss_pred CccCcccCCCCCCccCCeEEeC--CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC-eEeeeEEccc-CCC
Confidence 000 001111 224688999974 58999998543 333333344 2211112121 224
Q ss_pred ccceEEEE-ECCeEEEEE
Q 020019 295 RLATAATV-KDGRVYLNH 311 (332)
Q Consensus 295 ~~pt~va~-~~g~lyv~~ 311 (332)
..|..+++ .+|.|||+.
T Consensus 323 ~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 323 QRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp CCEEEEEECTTSCEEEEE
T ss_pred CceeEEEECCCCcEEEEE
Confidence 46899999 789999964
No 66
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.63 E-value=9.8e-14 Score=125.81 Aligned_cols=193 Identities=11% Similarity=0.052 Sum_probs=135.1
Q ss_pred CCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecc-cCcCCCccceEEEeCCCCeEEEEEeCcCC-
Q 020019 43 SSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKD-LELTGNGSLGLVLDHPRNRLLVVAADVFG- 120 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gi~vd~~~g~l~v~~~~~~~- 120 (332)
....|.+++++++|++|+++...++|++++++ ++. . .+... .+...+.|++++++++ |++|+++...+.
T Consensus 84 ~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~-----~--~~~~~~~~~~~~~~~~i~~d~d-G~l~~td~~~g~~ 154 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA-----H--LLVGRYAGKRLNSPNDLIVARD-GAIWFTDPPFGLR 154 (305)
T ss_dssp SCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-----E--EEECEETTEECSCCCCEEECTT-SCEEEECCSGGGS
T ss_pred CCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE-----E--EEEeccCCCccCCCCCEEECCC-CCEEEeCcCCCcc
Confidence 34478999999999988887667899999986 542 1 22211 1112246899999996 999998642110
Q ss_pred -----------CccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCC-----CeEEEEcCCCceE
Q 020019 121 -----------NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTG-----SKIWKVGVKGEFL 183 (332)
Q Consensus 121 -----------~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~-----~~I~~v~~~g~~~ 183 (332)
...+.|++||+++++...... ...||++++++||+ +|++++.. +.|++++.++...
T Consensus 155 ~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~-------~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l 227 (305)
T 3dr2_A 155 KPSQGCPADPELAHHSVYRLPPDGSPLQRMAD-------LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL 227 (305)
T ss_dssp CGGGSCCCCCSSSCEEEEEECSSSCCCEEEEE-------ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEE
T ss_pred ccccccccccccCCCeEEEEcCCCCcEEEEec-------CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc
Confidence 123579999998887654332 25789999999996 99999874 7899988663321
Q ss_pred ---EEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCC
Q 020019 184 ---SIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSP 260 (332)
Q Consensus 184 ---~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~d 260 (332)
..+... ....|+||+++++|+||++. .+.|+++++++. ....+..+ ..|..++++++
T Consensus 228 ~~~~~~~~~---------~~~~pdgi~~d~~G~lwv~~--~~gv~~~~~~g~-----~~~~~~~~----~~~~~~~f~~d 287 (305)
T 3dr2_A 228 HDRRHFASV---------PDGLPDGFCVDRGGWLWSSS--GTGVCVFDSDGQ-----LLGHIPTP----GTASNCTFDQA 287 (305)
T ss_dssp EEEEEEECC---------SSSCCCSEEECTTSCEEECC--SSEEEEECTTSC-----EEEEEECS----SCCCEEEECTT
T ss_pred cCCeEEEEC---------CCCCCCeEEECCCCCEEEec--CCcEEEECCCCC-----EEEEEECC----CceeEEEEeCC
Confidence 111110 12358999999999999987 346999998643 56666654 25889999877
Q ss_pred C-eEEEEeCCce
Q 020019 261 T-KLVVAGNPSA 271 (332)
Q Consensus 261 G-~l~va~~~~~ 271 (332)
+ .||++.....
T Consensus 288 ~~~L~it~~~~l 299 (305)
T 3dr2_A 288 QQRLFITGGPCL 299 (305)
T ss_dssp SCEEEEEETTEE
T ss_pred CCEEEEEcCCeE
Confidence 4 6999987653
No 67
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.63 E-value=3.1e-15 Score=151.22 Aligned_cols=215 Identities=13% Similarity=0.090 Sum_probs=144.3
Q ss_pred CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCC----CcEEEEE
Q 020019 65 DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLST----WNRLFLT 140 (332)
Q Consensus 65 ~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~----g~~~~~~ 140 (332)
...|.+++..+.+. . .++ +.. ..|.||++++.+++||+++.. ...|+++++++ .....
T Consensus 385 ~~~I~~id~~~~~~-----~--~~~--~~~--~~p~gla~d~~~~~Ly~sD~~-----~~~I~~~~~~g~~~~~~~~~-- 446 (699)
T 1n7d_A 385 RHEVRKMTLDRSEY-----T--SLI--PNL--RNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDT-- 446 (699)
T ss_dssp TTC-CEECTTSCCE-----E--CCS--CCC--TTCCCCEEETTTTEEEECCTT-----TTSBEEEESCCCCC-CCCCC--
T ss_pred ccceEEEeCCCCcc-----e--eee--ccC--cceEEEccccccCeEEEEecC-----CCeEEEEecCCCCCCcceEE--
Confidence 36789998875542 1 122 122 378899999877899999863 35688899875 11111
Q ss_pred ecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEe
Q 020019 141 QLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIH 218 (332)
Q Consensus 141 ~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~ 218 (332)
.+ ..+...|.+|++|. .|+||++|...++|++++++|+....+... .+..|+||+++|++ +|||++
T Consensus 447 ~i---~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~---------~~~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 447 VI---SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---------QGSKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp BC---CSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCC---------SSCCCCCEECCSSSSCCEECC
T ss_pred EE---eCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeC---------CCCCcceEEEccCCCcEEEcc
Confidence 11 11235789999996 478999999999999999998765443222 23468999999975 999999
Q ss_pred CCC-CeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCC-CeEEEEeCCce-EEEEcCCCceEEEEEeeecCCCcc
Q 020019 219 TFS-GNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSP-TKLVVAGNPSA-RLVESSDGWETAAVVAKFSGPVHR 295 (332)
Q Consensus 219 ~~~-~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~d-G~l~va~~~~~-~~v~~~dg~~~~~~~~~~~~~~~~ 295 (332)
+.. ++|+++++++. ..+.+. . ..+..|.||+++++ ++||+++.... ..++..+|.....+... ...+.
T Consensus 515 ~~~~~~I~~~~~dG~-----~~~~l~-~-~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~--~~~~~ 585 (699)
T 1n7d_A 515 WGTPAKIKKGGLNGV-----DIYSLV-T-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED--EKRLA 585 (699)
T ss_dssp CSSSCCEEBCCSSSC-----CCCEES-C-SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCC--SSSCS
T ss_pred cCCCCeEEEEeCCCC-----CeeEEE-e-CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEec--CCcCC
Confidence 876 89999998743 222222 2 24678999999975 88999985432 22445556222223221 13467
Q ss_pred cceEEEEECCeEEEEEecCcccc
Q 020019 296 LATAATVKDGRVYLNHMLGFGYP 318 (332)
Q Consensus 296 ~pt~va~~~g~lyv~~~~g~~~~ 318 (332)
.|.++++.+++||++++....+.
T Consensus 586 ~P~glavd~~~lywtd~~~~~V~ 608 (699)
T 1n7d_A 586 HPFSLAVFEDKVFWTDIINEAIF 608 (699)
T ss_dssp SCCCCEEETTEEEEECSTTTCEE
T ss_pred CceEeEEECCEEEEEeCCCCeEE
Confidence 89999998889999887665544
No 68
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.62 E-value=6.4e-14 Score=124.82 Aligned_cols=192 Identities=14% Similarity=0.040 Sum_probs=134.3
Q ss_pred ccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEc
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVG 177 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~ 177 (332)
.+.||+++++ ++||++.... ..+.|.++|++++++...+.+. ...++.+++++. +.+|++++..+.++++|
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~---~~s~v~~iD~~tg~v~~~i~l~----~~~fgeGi~~~g-~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLY---GRSSVRQVALQTGKVENIHKMD----DSYFGEGLTLLN-EKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp CEEEEEECST-TEEEEEECST---TTCEEEEEETTTCCEEEEEECC----TTCCEEEEEEET-TEEEEEETTCSEEEEEE
T ss_pred CcccEEEeCC-CeEEEECCCC---CCCEEEEEECCCCCEEEEEecC----CCcceEEEEEeC-CEEEEEEecCCEEEEEE
Confidence 4789999997 8999998532 2367999999999998877762 246777888884 47999999999999999
Q ss_pred CC-CceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEec--CCCCCCCC
Q 020019 178 VK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA--GGPLSFGD 253 (332)
Q Consensus 178 ~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~--g~~~~~pd 253 (332)
++ ++....+..+ .+.|..+.+|| +||+++ .+++|+.||+++.+ .+..+.+. +.++..|.
T Consensus 93 ~~t~~v~~~i~~g------------~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~----v~~~I~Vg~~~~p~~~~n 155 (266)
T 2iwa_A 93 RRTLSNIKNFTHQ------------MKDGWGLATDGKILYGSD-GTSILYEIDPHTFK----LIKKHNVKYNGHRVIRLN 155 (266)
T ss_dssp TTTTEEEEEEECC------------SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCC----EEEEEECEETTEECCCEE
T ss_pred CCCCcEEEEEECC------------CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCc----EEEEEEECCCCcccccce
Confidence 87 4444333211 13456666788 999999 68999999999863 56666653 23445688
Q ss_pred eEEEeCCCeEEEEeCCc--eEEEEcCCCceEEEEEe-eec-------CCCcccceEEEE--ECCeEEEEEecCcc
Q 020019 254 GLELLSPTKLVVAGNPS--ARLVESSDGWETAAVVA-KFS-------GPVHRLATAATV--KDGRVYLNHMLGFG 316 (332)
Q Consensus 254 Gi~~~~dG~l~va~~~~--~~~v~~~dg~~~~~~~~-~~~-------~~~~~~pt~va~--~~g~lyv~~~~g~~ 316 (332)
+|++. +|+||++.... ..++...+|...+.+.- .+. .+....|.++++ .++++||++.....
T Consensus 156 ele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~ 229 (266)
T 2iwa_A 156 ELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK 229 (266)
T ss_dssp EEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE
T ss_pred eEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCe
Confidence 99998 79999998543 34456666732333321 110 012357889999 45799998765544
No 69
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.61 E-value=7.8e-14 Score=127.20 Aligned_cols=203 Identities=17% Similarity=0.205 Sum_probs=138.4
Q ss_pred CccccceEEcCCCCEEEEEecC----CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 44 SFFRECAKWDDSGRRFIVSFLD----GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~~~~~----g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
...|.+++++++|++|++.... +.|++++++++.. . .+..... .+..+++++++++ |++|+++....
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~-----~--~~~~~~~-~~~~~~~i~~d~~-g~l~v~~~~~~ 156 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL-----Q--DIIEDLS-TAYCIDDMVFDSK-GGFYFTDFRGY 156 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC-----E--EEECSSS-SCCCEEEEEECTT-SCEEEEECCCB
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEE-----E--EEEccCc-cCCcccceEECCC-CCEEEEecccc
Confidence 3468899999999999887554 6899999886652 1 2332111 2246899999996 99999875311
Q ss_pred -CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcC--CCceEEEecCCCCCCcc
Q 020019 120 -GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGV--KGEFLSIISSPLFTPKE 195 (332)
Q Consensus 120 -~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~--~g~~~~~~~~~~~~~p~ 195 (332)
......|+++|+++++......- ...+++++++++|+ +|+++...+.|++++. +|+....+.......
T Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~-- 228 (333)
T 2dg1_A 157 STNPLGGVYYVSPDFRTVTPIIQN------ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYY-- 228 (333)
T ss_dssp TTBCCEEEEEECTTSCCEEEEEEE------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEE--
T ss_pred ccCCCceEEEEeCCCCEEEEeecC------CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEe--
Confidence 01235799999887666543221 24588999999996 9999988899999987 444322110000000
Q ss_pred cccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCC---CCCCCCeEEEeCCC-eEEEEeCC
Q 020019 196 WYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGG---PLSFGDGLELLSPT-KLVVAGNP 269 (332)
Q Consensus 196 ~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~---~~~~pdGi~~~~dG-~l~va~~~ 269 (332)
......|++|+++++|.||+++..+++|+++++++. .+..+..+.. .+..|.++++++|| .||++...
T Consensus 229 -~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~-----~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 229 -FTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY-----PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp -CCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSC-----EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred -cCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCC-----EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 001235789999999999999988899999998533 4555554311 12268999999885 89998754
No 70
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.61 E-value=4.6e-13 Score=118.28 Aligned_cols=188 Identities=14% Similarity=0.153 Sum_probs=131.3
Q ss_pred ccccceEEcCCCCEEEEEecC--CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 45 FFRECAKWDDSGRRFIVSFLD--GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~--g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
.+.+|+.++ ++.+|.+.-.. ++|.++|+.+++ +.. ...-++.. -..||+++. ++||+++..
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk----v~~--~~~l~~~~---FgeGit~~g--~~ly~ltw~----- 105 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK----TLQ--QIELGKRY---FGEGISDWK--DKIVGLTWK----- 105 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC----EEE--EEECCTTC---CEEEEEEET--TEEEEEESS-----
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCc----EEE--EEecCCcc---ceeEEEEeC--CEEEEEEee-----
Confidence 366999999 67777776433 489999999887 233 22111111 235678774 799999863
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCcc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~ 201 (332)
.+.+++||+++.++...+...+ .+-+++.|. +.+|++|. .+.|+.+|+. .+....+....-.. ...
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~~------eG~glt~dg-~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~-----~~~ 172 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYDG------EGWGLTHND-QYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGE-----ELP 172 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECSS------CCCCEEECS-SCEEECCS-SSEEEEECTTTCSEEEEEECEETTE-----ECC
T ss_pred CCEEEEEECccCcEEEEEECCC------CceEEecCC-CEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCc-----ccc
Confidence 4679999999999887777631 223555443 46999994 7999999998 45443332111001 124
Q ss_pred ccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecC---------CCCCCCCeEEEeCC-CeEEEEe
Q 020019 202 GLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAG---------GPLSFGDGLELLSP-TKLVVAG 267 (332)
Q Consensus 202 ~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g---------~~~~~pdGi~~~~d-G~l~va~ 267 (332)
.+|.+.+. +|+||++.+.++.|.+||+++++ .+..+.+.+ .....|.|||++++ ++|||++
T Consensus 173 ~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~----V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 173 ELNELEWV-DGEIFANVWQTNKIVRIDPETGK----VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEECTTTCB----EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccceeEEE-CCEEEEEEccCCeEEEEECCCCc----EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 57888887 78999999999999999999983 567777642 01247899999986 7899997
No 71
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.60 E-value=3.3e-13 Score=118.20 Aligned_cols=191 Identities=17% Similarity=0.182 Sum_probs=131.8
Q ss_pred cCCccccceEEcCCCCEEEEE-ec-CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 42 SSSFFRECAKWDDSGRRFIVS-FL-DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 42 ~~~~~pegia~d~~g~~~~~~-~~-~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
....+.+|+.++. +.+|.+. .. .++|.++|+.+++ +.. ... -+.. --..|++++. ++||+++.
T Consensus 18 d~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk----v~~--~~~-l~~~--~fgeGi~~~~--~~ly~ltw--- 82 (243)
T 3mbr_X 18 DTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR----ILQ--RAE-VPPP--YFGAGIVAWR--DRLIQLTW--- 82 (243)
T ss_dssp CTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC----EEE--EEE-CCTT--CCEEEEEEET--TEEEEEES---
T ss_pred CCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCC----EEE--EEe-CCCC--cceeEEEEeC--CEEEEEEe---
Confidence 3344889999997 6777776 32 4689999999887 233 121 1111 1235677774 89999986
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCC-ceEEEecCCCCCCccccc
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG-EFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g-~~~~~~~~~~~~~p~~~~ 198 (332)
+.+.+++||.++.++...+... . .+-+++-|. +.||++| +.+.|+.+|+.. +....+....-..
T Consensus 83 --~~~~v~v~D~~tl~~~~ti~~~--~----~Gwglt~dg-~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~----- 147 (243)
T 3mbr_X 83 --RNHEGFVYDLATLTPRARFRYP--G----EGWALTSDD-SHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGR----- 147 (243)
T ss_dssp --SSSEEEEEETTTTEEEEEEECS--S----CCCEEEECS-SCEEEEC-SSSEEEEECTTTCCEEEEEECEETTE-----
T ss_pred --eCCEEEEEECCcCcEEEEEeCC--C----CceEEeeCC-CEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCc-----
Confidence 3567999999999988777662 1 223455432 4799999 589999999874 4333322111000
Q ss_pred CccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecC----C------CCCCCCeEEEeCC-CeEEEEe
Q 020019 199 NLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAG----G------PLSFGDGLELLSP-TKLVVAG 267 (332)
Q Consensus 199 ~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g----~------~~~~pdGi~~~~d-G~l~va~ 267 (332)
....+|.+.+. +|+||++.+.++.|.+||+.+++ .+..+.+.+ . ....|+|||++++ ++|||++
T Consensus 148 ~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~----V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 148 PLDNLNELEWV-NGELLANVWLTSRIARIDPASGK----VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCB----EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ccccceeeEEe-CCEEEEEECCCCeEEEEECCCCC----EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 12456888886 88999999999999999999983 567777542 0 1247899999986 7899997
No 72
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.60 E-value=1.3e-13 Score=124.26 Aligned_cols=193 Identities=16% Similarity=0.169 Sum_probs=135.2
Q ss_pred ccccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEE-ecc-cCcCCCccceEEEeCCCCeEEEEEeCcC--
Q 020019 45 FFRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTL-VKD-LELTGNGSLGLVLDHPRNRLLVVAADVF-- 119 (332)
Q Consensus 45 ~~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~gi~vd~~~g~l~v~~~~~~-- 119 (332)
..|.+++++++ |++|+++. .+.|++++++ ++. . .+ ... .......+.+|++|++ |++|+++....
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~-----~--~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~ 140 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTF-----E--EIAKKDSEGRRMQGCNDCAFDYE-GNLWITAPAGEVA 140 (314)
T ss_dssp CCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCE-----E--ECCSBCTTSCBCBCCCEEEECTT-SCEEEEECBCBCT
T ss_pred CCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCE-----E--EEEeccCCCccccCCcCEEECCC-CCEEEEecCcccc
Confidence 36889999999 88888775 3489999987 652 1 22 211 1112236899999996 99999985310
Q ss_pred --------CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEEC----CCC-cEEEEeCCCCeEEEEcCC--CceE-
Q 020019 120 --------GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVD----AEG-NAYVTDVTGSKIWKVGVK--GEFL- 183 (332)
Q Consensus 120 --------~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd----~dG-~lyvtd~~~~~I~~v~~~--g~~~- 183 (332)
....+.|++||++ ++......- ...|++++++ ++| .+|+++...+.|++++.+ |+..
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~------~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~ 213 (314)
T 1pjx_A 141 PADYTRSMQEKFGSIYCFTTD-GQMIQVDTA------FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN 213 (314)
T ss_dssp TSCCCBTTSSSCEEEEEECTT-SCEEEEEEE------ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE
T ss_pred cccccccccCCCCeEEEECCC-CCEEEeccC------CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc
Confidence 0112578999987 665443221 2467899999 998 599999999999999854 4432
Q ss_pred --EEecCCCCCCcccccCc-cccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCC
Q 020019 184 --SIISSPLFTPKEWYKNL-VGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSP 260 (332)
Q Consensus 184 --~~~~~~~~~~p~~~~~~-~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~d 260 (332)
.+...+. .. ..|++|+++++|.||+++..++.|+++++++++ ....+..+ ...|.+++++++
T Consensus 214 ~~~~~~~~~--------~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~----~~~~~~~~---~~~~~~i~~~~d 278 (314)
T 1pjx_A 214 KKVWGHIPG--------THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ----PKMRIRCP---FEKPSNLHFKPQ 278 (314)
T ss_dssp EEEEEECCC--------CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS----CSEEEECS---SSCEEEEEECTT
T ss_pred ceEEEECCC--------CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc----EeEEEeCC---CCCceeEEECCC
Confidence 1111110 11 457899999999999999888999999998552 34444433 257889999999
Q ss_pred Ce-EEEEeCC
Q 020019 261 TK-LVVAGNP 269 (332)
Q Consensus 261 G~-l~va~~~ 269 (332)
|+ ||+++..
T Consensus 279 g~~l~v~~~~ 288 (314)
T 1pjx_A 279 TKTIFVTEHE 288 (314)
T ss_dssp SSEEEEEETT
T ss_pred CCEEEEEeCC
Confidence 88 9999855
No 73
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.59 E-value=1.5e-12 Score=119.39 Aligned_cols=236 Identities=16% Similarity=0.140 Sum_probs=142.6
Q ss_pred CCccccceEEcCCCCEEEEE-ecCCeEEEEECCC-CCCCccceeeeEEecccCc------CCCccceEEEeCCCCeEEEE
Q 020019 43 SSFFRECAKWDDSGRRFIVS-FLDGGIGQVAVPD-DYPPGTVLEEVTLVKDLEL------TGNGSLGLVLDHPRNRLLVV 114 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~-~~~g~I~~vd~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~gi~vd~~~g~l~v~ 114 (332)
.+..|.+++++++|+.+++. ..++.|..++... +.. .........+. ....+.+++++++ |++|++
T Consensus 84 ~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~spd-g~l~v~ 157 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL-----TLTDTVQHSGHGPRPEQDGSHIHYTDLTPD-NRLAVI 157 (347)
T ss_dssp ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE-----EEEEEEECCCCCSSTTCSSCCEEEEEECTT-SCEEEE
T ss_pred CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe-----eecceeecCCCCCCccccCCCceEEEECCC-CcEEEE
Confidence 35588999999999966555 5678888887642 321 11111111110 0124678999997 778888
Q ss_pred EeCcCCCccceEEEEECC-CCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC---CceEEEecCC
Q 020019 115 AADVFGNKYSAVAAYDLS-TWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK---GEFLSIISSP 189 (332)
Q Consensus 115 ~~~~~~~~~~~l~~~d~~-~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~---g~~~~~~~~~ 189 (332)
+.. .+.+.+||.+ +++......+..+ ....|++++++|||+ +|+++...+.|..++.+ |+........
T Consensus 158 ~~~-----~~~v~~~~~~~~g~~~~~~~~~~~--~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~ 230 (347)
T 3hfq_A 158 DLG-----SDKVYVYNVSDAGQLSEQSVLTME--AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK 230 (347)
T ss_dssp ETT-----TTEEEEEEECTTSCEEEEEEEECC--TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE
T ss_pred eCC-----CCEEEEEEECCCCcEEEeeeEEcC--CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee
Confidence 753 3578889987 5665543333211 135788999999997 99999888887666543 4433221111
Q ss_pred CCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCC-CCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEE
Q 020019 190 LFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVD-GVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVA 266 (332)
Q Consensus 190 ~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~-~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va 266 (332)
.. +........+.+++++||| +||+++...++|..++++. +.. ..+..+.. ....|.++++++||+ ||++
T Consensus 231 ~~--~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~--~~~~~~~~---~~~~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 231 TI--PADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL--TLIQQIST---EGDFPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp SS--CTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE--EEEEEEEC---SSSCCCEEEECTTSSEEEEE
T ss_pred ec--CCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE--EEeEEEec---CCCCcCeEEECCCCCEEEEE
Confidence 11 1000122457899999999 8999999889888888762 211 12222332 224689999999986 8888
Q ss_pred eCC--ceEEE--EcCCCceEEEEEeeecCCCcccceEEEE
Q 020019 267 GNP--SARLV--ESSDGWETAAVVAKFSGPVHRLATAATV 302 (332)
Q Consensus 267 ~~~--~~~~v--~~~dg~~~~~~~~~~~~~~~~~pt~va~ 302 (332)
+.. ...+. ...+| +...+...+. +..|.++.+
T Consensus 304 ~~~~~~v~v~~~d~~tg-~l~~~~~~~~---~p~p~~~~~ 339 (347)
T 3hfq_A 304 NQNTDNATLYARDLTSG-KLSLLQKDVT---VPEGVCVRF 339 (347)
T ss_dssp ETTTTEEEEEEECTTTC-CEEEEEEEEE---CTTEEEEEE
T ss_pred EcCCCcEEEEEEeCCCC-eEEeccccee---cCCCcEEEe
Confidence 643 22222 23445 4444444433 334565554
No 74
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.57 E-value=6.7e-13 Score=117.28 Aligned_cols=187 Identities=16% Similarity=0.156 Sum_probs=132.9
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
.+.+|+.++. +.+|++.-..|+|.++|+.+++. ..+ .+ ++.. -..|++++. ++||+++.. .+
T Consensus 55 ~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv----~~~--~l-~~~~---FgeGit~~g--~~Ly~ltw~-----~~ 116 (268)
T 3nok_A 55 AFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQP----VWM--ER-LGNI---FAEGLASDG--ERLYQLTWT-----EG 116 (268)
T ss_dssp CCEEEEEEET-TEEEEEETTTTEEEECCSSCSSC----SEE--EE-CTTC---CEEEEEECS--SCEEEEESS-----SC
T ss_pred cccceEEEEC-CEEEEEcCCCCEEEEEECCCCcE----EeE--EC-CCCc---ceeEEEEeC--CEEEEEEcc-----CC
Confidence 3668999984 67777776678899999998873 332 23 2211 235687775 799999863 56
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCC-ceEEEecCCCCCCcccccCcccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG-EFLSIISSPLFTPKEWYKNLVGL 203 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g-~~~~~~~~~~~~~p~~~~~~~~~ 203 (332)
.+++||+++.++...+... . .+-+++.|. +.||++| +.+.|+.+|+.. +....+....- +. ....+
T Consensus 117 ~v~V~D~~Tl~~~~ti~~~--~----eGwGLt~Dg-~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~--g~---~v~~l 183 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRYS--G----EGWGLCYWN-GKLVRSD-GGTMLTFHEPDGFALVGAVQVKLR--GQ---PVELI 183 (268)
T ss_dssp EEEEEETTTTEEEEEEECS--S----CCCCEEEET-TEEEEEC-SSSEEEEECTTTCCEEEEEECEET--TE---ECCCE
T ss_pred EEEEEECCcCcEEEEEeCC--C----ceeEEecCC-CEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCC--Cc---ccccc
Confidence 7999999999988777762 1 234566553 4699999 589999999874 44433321111 10 23457
Q ss_pred CeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecC----------CCCCCCCeEEEeCC-CeEEEEe
Q 020019 204 NGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAG----------GPLSFGDGLELLSP-TKLVVAG 267 (332)
Q Consensus 204 nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g----------~~~~~pdGi~~~~d-G~l~va~ 267 (332)
|.+.+. +|+||++.+.++.|.+||+++++ .+..+.+.+ .....|+|||++++ ++|||++
T Consensus 184 NeLe~~-dG~lyanvw~s~~I~vIDp~TG~----V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 184 NELECA-NGVIYANIWHSSDVLEIDPATGT----VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEEE-TTEEEEEETTCSEEEEECTTTCB----EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccEEe-CCEEEEEECCCCeEEEEeCCCCc----EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 899987 88999999999999999999983 567777541 01247899999986 7799997
No 75
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.55 E-value=5.6e-12 Score=113.11 Aligned_cols=223 Identities=14% Similarity=0.078 Sum_probs=154.0
Q ss_pred CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCc
Q 020019 56 GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWN 135 (332)
Q Consensus 56 g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~ 135 (332)
++++++...+++|+.+|..+++. .|.-... .+..+..+.+.++ |++|++. ...+..||+ +|+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~--------~w~~~~~-~~~~~~~~~~~pd-G~ilvs~-------~~~V~~~d~-~G~ 66 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEI--------VWEYPLE-KGWECNSVAATKA-GEILFSY-------SKGAKMITR-DGR 66 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEE--------EEEEECC-TTCCCCEEEECTT-SCEEEEC-------BSEEEEECT-TSC
T ss_pred CcEEEeeCCCCEEEEEECCCCeE--------EEEeCCC-ccCCCcCeEECCC-CCEEEeC-------CCCEEEECC-CCC
Confidence 56677777789999999877762 2321111 1125788999996 9988843 246899999 788
Q ss_pred EEEEEecCCCCCCCCCccceEECCCCcEEEEeCC-CCeEEEEcCCCceEEEecCCC-CCCcccccCccccCeEEEccCce
Q 020019 136 RLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT-GSKIWKVGVKGEFLSIISSPL-FTPKEWYKNLVGLNGIVYHPDGF 213 (332)
Q Consensus 136 ~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~-~~~I~~v~~~g~~~~~~~~~~-~~~p~~~~~~~~~nGi~~~~dG~ 213 (332)
.++.+... . ....+.+.+.++|++++++.. .++|+.++++|+....+.... ... ....+.++++.++|.
T Consensus 67 ~~W~~~~~--~--~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~-----~~~~~~~v~~~~~G~ 137 (276)
T 3no2_A 67 ELWNIAAP--A--GCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIER-----PHAQFRQINKNKKGN 137 (276)
T ss_dssp EEEEEECC--T--TCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSS-----GGGSCSCCEECTTSC
T ss_pred EEEEEcCC--C--CccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCc-----ccccccCceECCCCC
Confidence 88776652 1 234567889999999999988 899999999998654432111 111 123567889999998
Q ss_pred EEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCceE-EEEcCC-CceEEEEEe-eec
Q 020019 214 LIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSAR-LVESSD-GWETAAVVA-KFS 290 (332)
Q Consensus 214 Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~~-~v~~~d-g~~~~~~~~-~~~ 290 (332)
+++++..+++|+.+|++ ++ .+-.+..+ ..|.++.+.++|++++++....+ +.+.++ |...-++.. .++
T Consensus 138 ~lv~~~~~~~v~~~d~~-G~----~~w~~~~~----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~ 208 (276)
T 3no2_A 138 YLVPLFATSEVREIAPN-GQ----LLNSVKLS----GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIE 208 (276)
T ss_dssp EEEEETTTTEEEEECTT-SC----EEEEEECS----SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSB
T ss_pred EEEEecCCCEEEEECCC-CC----EEEEEECC----CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCC
Confidence 88999999999999998 62 45444433 35778999999999999754433 344555 722222221 112
Q ss_pred CCCcccceEEEE-ECCeEEEEEecC
Q 020019 291 GPVHRLATAATV-KDGRVYLNHMLG 314 (332)
Q Consensus 291 ~~~~~~pt~va~-~~g~lyv~~~~g 314 (332)
...+..|++++. .+|.+||++..|
T Consensus 209 ~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 209 GVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp SCCCSEEEEEEECTTSCEEEEEECT
T ss_pred CccccccccceEcCCCCEEEEeccC
Confidence 224677899988 899999988755
No 76
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.52 E-value=7.4e-12 Score=115.41 Aligned_cols=242 Identities=12% Similarity=0.122 Sum_probs=143.4
Q ss_pred CCccccceEEcCCCCEEEEE-e---cCCeE--EEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEe
Q 020019 43 SSFFRECAKWDDSGRRFIVS-F---LDGGI--GQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAA 116 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~-~---~~g~I--~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~ 116 (332)
....|..++++++|+.+|+. . ..+.| +.++.++++. + .+...+ ..+..|..+++ +...||+++.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~-----~--~~~~~~-~~~~~p~~~~~--dg~~l~~~~~ 117 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL-----H--LLNTQK-TMGADPCYLTT--NGKNIVTANY 117 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE-----E--EEEEEE-CSSSCEEEEEE--CSSEEEEEET
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE-----E--EeeEec-cCCCCcEEEEE--CCCEEEEEEC
Confidence 34578899999999966655 3 23666 5666554542 1 111111 12236788888 3367888874
Q ss_pred CcCCCccceEEEEECCCC-cEE---EEEecCCCC-----CCCCCccceEECCCCc-EEEEeCCCCeEEEEc--CCC----
Q 020019 117 DVFGNKYSAVAAYDLSTW-NRL---FLTQLSGPS-----DGKSCADDVTVDAEGN-AYVTDVTGSKIWKVG--VKG---- 180 (332)
Q Consensus 117 ~~~~~~~~~l~~~d~~~g-~~~---~~~~l~~~~-----~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~--~~g---- 180 (332)
. .+.+.+|+.++. ... ......+.. +....+++++++|+|+ +|+++...+.|+.++ ..+
T Consensus 118 ~-----~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~ 192 (361)
T 3scy_A 118 S-----GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADN 192 (361)
T ss_dssp T-----TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTT
T ss_pred C-----CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccc
Confidence 3 356888988643 221 112221110 1124568899999997 999998888777664 333
Q ss_pred -c-eEE-----EecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCC
Q 020019 181 -E-FLS-----IISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFG 252 (332)
Q Consensus 181 -~-~~~-----~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~p 252 (332)
+ +.. ..... ...+|.+++|+||| .||+++..+++|..+++++++. ..+..+.........|
T Consensus 193 ~~~l~~~~~~~~~~~~---------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~--~~~~~~~~~~~~~~~~ 261 (361)
T 3scy_A 193 KEKFLTKGTPEAFKVA---------PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML--DEIQTVAADTVNAQGS 261 (361)
T ss_dssp CCCCEEEEEEEEEECC---------TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE--EEEEEEESCSSCCCCE
T ss_pred ccceeecccccceecC---------CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce--EEeEEEecCCCCCCCc
Confidence 2 211 11111 23467899999999 8999998899999888876521 1122222211223457
Q ss_pred CeEEEeCCCe-EEEEeCC--c-eEEEEc--CCCceEEEEEeeecCCCcccceEEEE-EC-CeEEEEEecC
Q 020019 253 DGLELLSPTK-LVVAGNP--S-ARLVES--SDGWETAAVVAKFSGPVHRLATAATV-KD-GRVYLNHMLG 314 (332)
Q Consensus 253 dGi~~~~dG~-l~va~~~--~-~~~v~~--~dg~~~~~~~~~~~~~~~~~pt~va~-~~-g~lyv~~~~g 314 (332)
.++++++||+ ||+++.. . ..+... .+| +. +....+.. ...|.++++ .+ +.||+++...
T Consensus 262 ~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g-~~-~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRLKADGVAIFKVDETNG-TL-TKVGYQLT--GIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp EEEEECTTSSEEEEEECSSSCEEEEEEECTTTC-CE-EEEEEEEC--SSCCCEEEECTTSCEEEEEETTT
T ss_pred ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC-cE-EEeeEecC--CCCCceEEECCCCCEEEEEECCC
Confidence 7999999987 7787644 2 233222 345 32 23333332 346889999 44 4688876543
No 77
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.52 E-value=6.5e-13 Score=123.46 Aligned_cols=203 Identities=14% Similarity=0.161 Sum_probs=125.6
Q ss_pred ccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC----CcEEEEeCCC---
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE----GNAYVTDVTG--- 170 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d----G~lyvtd~~~--- 170 (332)
.|.+|+++++ |+|||++.. ++|.+++ +++......++-...+...|++|+++|+ |.|||+++..
T Consensus 32 ~P~~ia~~pd-G~l~V~e~~------g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~ 102 (352)
T 2ism_A 32 VPWALAFLPD-GGMLIAERP------GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG 102 (352)
T ss_dssp CEEEEEECTT-SCEEEEETT------TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred CceEEEEcCC-CeEEEEeCC------CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC
Confidence 7999999997 999999863 6788888 4554433344211223568999999998 7899998864
Q ss_pred --CeEEEEcCCCc-e---EEEec-CCCCCCcccccCccccCeEEEccCceEEEEeCC-------------CCeEEEEeCC
Q 020019 171 --SKIWKVGVKGE-F---LSIIS-SPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTF-------------SGNLFKIDIV 230 (332)
Q Consensus 171 --~~I~~v~~~g~-~---~~~~~-~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~-------------~~~i~~id~~ 230 (332)
++|++++.++. . ..++. .+.. + ...-.+++|++++||+||++... .++|+||+++
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~l~~~~p~~--~---~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~d 177 (352)
T 2ism_A 103 LRNQVVRLRHLGERGVLDRVVLDGIPAR--P---HGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPE 177 (352)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEEEECCC--T---TCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTT
T ss_pred CccEEEEEEeCCCCcCceEEEEEeCCCC--C---CCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCC
Confidence 78999987742 1 12221 1100 0 01235789999999999999742 3789999987
Q ss_pred CCCCcc--------ceeEEEEecCCCCCCCCeEEEeC-CCeEEEEeCCceE--------EEEcCCC----ceEEE-----
Q 020019 231 DGVGEG--------EEIKLIRVAGGPLSFGDGLELLS-PTKLVVAGNPSAR--------LVESSDG----WETAA----- 284 (332)
Q Consensus 231 ~~~~~~--------~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~~~~~~--------~v~~~dg----~~~~~----- 284 (332)
+.-..+ ...+.+.. .+..|.||++++ +|+||++++...+ +-....| |....
T Consensus 178 G~~p~~npf~~~~~~~~~i~a~---G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~ 254 (352)
T 2ism_A 178 GEPAPGNPFLGRRGARPEVYSL---GHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGND 254 (352)
T ss_dssp SSBCTTCTTTTCTTSCTTEEEE---CCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCC
T ss_pred CCCCCCCcccCCCCCCccEEEE---cCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCC
Confidence 410000 01122222 346799999999 7999999854332 2222222 11000
Q ss_pred ---EEeeecCCCcccceEEEEECCeEEEEEecCccc
Q 020019 285 ---VVAKFSGPVHRLATAATVKDGRVYLNHMLGFGY 317 (332)
Q Consensus 285 ---~~~~~~~~~~~~pt~va~~~g~lyv~~~~g~~~ 317 (332)
......-+....|+++++.+|.+||+...+..+
T Consensus 255 ~~~~~p~~~~~~~~ap~G~~~~~G~l~v~~~~~~~v 290 (352)
T 2ism_A 255 PRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRGQAL 290 (352)
T ss_dssp TTSCCCSEECTTCCCEEEEEEETTEEEEEETTTTEE
T ss_pred CCCcCCeEecCCCCCCcceEEECCEEEEEECCCCEE
Confidence 000000012346888999889999987666543
No 78
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.51 E-value=4.9e-11 Score=110.58 Aligned_cols=220 Identities=14% Similarity=0.172 Sum_probs=151.6
Q ss_pred ccccceEEcCCCCEE-EEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 45 FFRECAKWDDSGRRF-IVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 45 ~~pegia~d~~g~~~-~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
..+.+++++++|+.+ ++...++.|..++..+++. . ..+... ..+.+++++++..+||++... .
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~----~---~~~~~~----~~v~~~~~spdg~~l~~~~~~-----~ 95 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV----I---ATVPAG----SSPQGVAVSPDGKQVYVTNMA-----S 95 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE----E---EEEECS----SSEEEEEECTTSSEEEEEETT-----T
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeE----E---EEEECC----CCccceEECCCCCEEEEEECC-----C
Confidence 357899999999865 4556789999999876652 1 122111 267899999974557777642 3
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCcc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~ 201 (332)
+.|.+||.++++....... ...+.+++++++|+ +|++....+.|+.+|.. ++....+.. ..
T Consensus 96 ~~v~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-----------~~ 158 (391)
T 1l0q_A 96 STLSVIDTTSNTVAGTVKT------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV-----------GR 158 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-----------CS
T ss_pred CEEEEEECCCCeEEEEEeC------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec-----------CC
Confidence 5799999999887655443 24578999999986 78999999999999976 444433321 12
Q ss_pred ccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeC----CceEEEE
Q 020019 202 GLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGN----PSARLVE 275 (332)
Q Consensus 202 ~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~----~~~~~v~ 275 (332)
.+.++++++|| .||++....++|+.+|+.++ +.+..+... ..+.++++.++|+ ||++.. ....+..
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~----~~~~~~~~~----~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTN----SVIDTVKVE----AAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTT----EEEEEEECS----SEEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCC----eEEEEEecC----CCccceEECCCCCEEEEEecCcCCCcEEEEE
Confidence 45799999999 89999999999999999876 234434322 4578899999975 666652 2334444
Q ss_pred cCCCceEEEEEeeecCCCcccceEEEE-E-CCeEEEEE
Q 020019 276 SSDGWETAAVVAKFSGPVHRLATAATV-K-DGRVYLNH 311 (332)
Q Consensus 276 ~~dg~~~~~~~~~~~~~~~~~pt~va~-~-~g~lyv~~ 311 (332)
..++ + ....+.. ...|.++++ . ++.||++.
T Consensus 231 ~~~~-~---~~~~~~~--~~~~~~~~~s~dg~~l~~s~ 262 (391)
T 1l0q_A 231 TGTN-K---ITARIPV--GPDPAGIAVTPDGKKVYVAL 262 (391)
T ss_dssp TTTT-E---EEEEEEC--CSSEEEEEECTTSSEEEEEE
T ss_pred CCCC-e---EEEEEec--CCCccEEEEccCCCEEEEEc
Confidence 4555 2 3333332 234677888 3 44677764
No 79
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.51 E-value=4.2e-12 Score=120.64 Aligned_cols=216 Identities=12% Similarity=0.065 Sum_probs=126.7
Q ss_pred CCccccceEEcCCCCEEEEE-e---------cCCeEEEEECCCCCCCccceeeeEEecc-cC-c-CCCccceEEEeCCCC
Q 020019 43 SSFFRECAKWDDSGRRFIVS-F---------LDGGIGQVAVPDDYPPGTVLEEVTLVKD-LE-L-TGNGSLGLVLDHPRN 109 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~-~---------~~g~I~~vd~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~gi~vd~~~g 109 (332)
.+..| ++++++||+.+|+. . .++.|.+||..+.+ +.. ++.-. +. . .+..|.+++++++..
T Consensus 117 vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~----vv~--~I~v~g~~r~~~g~~P~~~~~spDGk 189 (426)
T 3c75_H 117 GGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL----PIA--DIELPDAPRFLVGTYQWMNALTPDNK 189 (426)
T ss_dssp ECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC----EEE--EEEETTCCCCCBSCCGGGSEECTTSS
T ss_pred CCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc----EEE--EEECCCccccccCCCcceEEEcCCCC
Confidence 35689 99999999865554 3 35689999988776 222 22111 11 0 134789999999866
Q ss_pred eEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccc----eEECCCCcEEEEeCC----------------
Q 020019 110 RLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADD----VTVDAEGNAYVTDVT---------------- 169 (332)
Q Consensus 110 ~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~nd----iavd~dG~lyvtd~~---------------- 169 (332)
+|||++.. ..+.|.++|.+++++...+.+.+. ....|.+ +++.++|++++.+..
T Consensus 190 ~lyV~n~~----~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~ 263 (426)
T 3c75_H 190 NLLFYQFS----PAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTED 263 (426)
T ss_dssp EEEEEECS----SSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTT
T ss_pred EEEEEecC----CCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCC
Confidence 89998742 135689999999988877766210 0111222 344444442222212
Q ss_pred ---------------------CCeEEEEcCCCceEEEecCCCCCCcccccCccccCe---EEEccCc-eEEEEeC-----
Q 020019 170 ---------------------GSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNG---IVYHPDG-FLIVIHT----- 219 (332)
Q Consensus 170 ---------------------~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nG---i~~~~dG-~Lyva~~----- 219 (332)
.+.|+.+|..+....+...-.............|.| +++++|| +|||++.
T Consensus 264 ~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~g 343 (426)
T 3c75_H 264 ELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEW 343 (426)
T ss_dssp SCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTT
T ss_pred CceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccc
Confidence 234444444322111110000000000011122444 9999998 9999975
Q ss_pred ----CCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe--EEEEeCC--ceEEEEcCCC
Q 020019 220 ----FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK--LVVAGNP--SARLVESSDG 279 (332)
Q Consensus 220 ----~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~--l~va~~~--~~~~v~~~dg 279 (332)
.+++|+.||+.+.+ .+..+.++ ..|+||++++||+ +|+++.. ...+++..++
T Consensus 344 thk~~s~~VsVID~~T~k----vv~~I~vg----~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 344 KHKAASRFVVVLNAETGE----RINKIELG----HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp CTTSCEEEEEEEETTTCC----EEEEEEEE----EEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred cccCCCCEEEEEECCCCe----EEEEEECC----CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 24679999999873 67777765 3699999999987 6666632 3334455555
No 80
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.50 E-value=3.3e-12 Score=112.76 Aligned_cols=181 Identities=10% Similarity=0.059 Sum_probs=126.6
Q ss_pred cceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcC
Q 020019 99 SLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGV 178 (332)
Q Consensus 99 ~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~ 178 (332)
.+||.++ + ++||++.... +.+.|.++|+++|++.....++ ...|.-|++++. ++||+.++..+.++++|+
T Consensus 45 tqGL~~~-~-~~LyestG~~---g~S~v~~vD~~Tgkv~~~~~l~----~~~FgeGit~~g-~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 45 TEGFFYR-N-GYFYESTGLN---GRSSIRKVDIESGKTLQQIELG----KRYFGEGISDWK-DKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp EEEEEEE-T-TEEEEEEEET---TEEEEEEECTTTCCEEEEEECC----TTCCEEEEEEET-TEEEEEESSSSEEEEEET
T ss_pred cceEEEE-C-CEEEEECCCC---CCceEEEEECCCCcEEEEEecC----CccceeEEEEeC-CEEEEEEeeCCEEEEEEC
Confidence 4899998 4 8999998642 2457999999999998888773 245777888875 479999999999999998
Q ss_pred C-CceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEec--CCCCCCCCe
Q 020019 179 K-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA--GGPLSFGDG 254 (332)
Q Consensus 179 ~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~--g~~~~~pdG 254 (332)
+ .+....+..+. ..-|++ +|| .||+++. +++|+.+|+.+.+ .+..+.+. |.++..+..
T Consensus 115 ~t~~~~~ti~~~~-----------eG~glt--~dg~~L~~SdG-s~~i~~iDp~T~~----v~~~I~V~~~g~~~~~lNE 176 (262)
T 3nol_A 115 RNLRQVRSFNYDG-----------EGWGLT--HNDQYLIMSDG-TPVLRFLDPESLT----PVRTITVTAHGEELPELNE 176 (262)
T ss_dssp TTCCEEEEEECSS-----------CCCCEE--ECSSCEEECCS-SSEEEEECTTTCS----EEEEEECEETTEECCCEEE
T ss_pred ccCcEEEEEECCC-----------CceEEe--cCCCEEEEECC-CCeEEEEcCCCCe----EEEEEEeccCCccccccce
Confidence 6 45443332210 123555 566 9999985 8999999999873 56666653 234455667
Q ss_pred EEEeCCCeEEEEeCCce--EEEEcCCCceEEEEEeeecC-----------CCcccceEEEE--ECCeEEEEEe
Q 020019 255 LELLSPTKLVVAGNPSA--RLVESSDGWETAAVVAKFSG-----------PVHRLATAATV--KDGRVYLNHM 312 (332)
Q Consensus 255 i~~~~dG~l~va~~~~~--~~v~~~dg~~~~~~~~~~~~-----------~~~~~pt~va~--~~g~lyv~~~ 312 (332)
+++. +|+||+...... .++...+| ++++.+.. +....|.++|+ .+++|||+..
T Consensus 177 Le~~-~G~lyan~w~~~~I~vIDp~tG----~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 177 LEWV-DGEIFANVWQTNKIVRIDPETG----KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEE-TTEEEEEETTSSEEEEECTTTC----BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred eEEE-CCEEEEEEccCCeEEEEECCCC----cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 8886 799999875433 33445566 34333332 22356789999 4689999754
No 81
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.49 E-value=1.4e-11 Score=111.70 Aligned_cols=223 Identities=13% Similarity=0.072 Sum_probs=137.4
Q ss_pred EEcCCCCE-EEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEE
Q 020019 51 KWDDSGRR-FIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAY 129 (332)
Q Consensus 51 a~d~~g~~-~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~ 129 (332)
.++.+++. |+++..+++|..+|..+++. . .....+ ...+ +++++++...+|++... .+.|++|
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~----~---~~~~~~---~~~~-~~~~s~dg~~l~~~~~~-----~~~i~~~ 67 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEI----L---NQITLG---YDFV-DTAITSDCSNVVVTSDF-----CQTLVQI 67 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCE----E---EEEECC---CCEE-EEEECSSSCEEEEEEST-----TCEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccce----e---eeEEcc---CCcc-eEEEcCCCCEEEEEeCC-----CCeEEEE
Confidence 44555554 55667789999999887762 1 122111 2256 99999974458888763 3579999
Q ss_pred ECCCCcE-EEEEecCCCCCCCCCccc-eEECCCCc-EEEEeCCCC--eEEEEcCC-CceEEEecCCCCCCcccccCcccc
Q 020019 130 DLSTWNR-LFLTQLSGPSDGKSCADD-VTVDAEGN-AYVTDVTGS--KIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGL 203 (332)
Q Consensus 130 d~~~g~~-~~~~~l~~~~~~~~~~nd-iavd~dG~-lyvtd~~~~--~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~ 203 (332)
|+++++. ...... ...|.. ++++|+|+ +|+++...+ .|+.++.+ ++....+.. ...+
T Consensus 68 d~~~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-----------~~~~ 130 (331)
T 3u4y_A 68 ETQLEPPKVVAIQE------GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-----------PYDA 130 (331)
T ss_dssp ECSSSSCEEEEEEE------CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-----------CTTE
T ss_pred ECCCCceeEEeccc------CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-----------CCCc
Confidence 9999886 443332 234566 99999997 664333334 89999986 444433321 1346
Q ss_pred CeEEEccCc-eEEEEeCCCCe-EEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeCC--ceEEEEcCC
Q 020019 204 NGIVYHPDG-FLIVIHTFSGN-LFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGNP--SARLVESSD 278 (332)
Q Consensus 204 nGi~~~~dG-~Lyva~~~~~~-i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~~--~~~~v~~~d 278 (332)
++++++||| .||+++...++ |+.++++..... ......... ....|.++++++||+ +|+++.. ...++...+
T Consensus 131 ~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~-~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 207 (331)
T 3u4y_A 131 VGIAISPNGNGLILIDRSSANTVRRFKIDADGVL-FDTGQEFIS--GGTRPFNITFTPDGNFAFVANLIGNSIGILETQN 207 (331)
T ss_dssp EEEEECTTSSCEEEEEETTTTEEEEEEECTTCCE-EEEEEEEEC--SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cceEECCCCCEEEEEecCCCceEEEEEECCCCcE-eecCCcccc--CCCCccceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 899999999 89999988777 776666532110 001111111 224689999999987 8888743 344445555
Q ss_pred CceEEEEEeeecCCCcccceEEEE-ECC-eEEEEEe
Q 020019 279 GWETAAVVAKFSGPVHRLATAATV-KDG-RVYLNHM 312 (332)
Q Consensus 279 g~~~~~~~~~~~~~~~~~pt~va~-~~g-~lyv~~~ 312 (332)
+.. .+....+.. ...|.++++ .++ .||+++.
T Consensus 208 ~~~-~~~~~~~~~--~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 208 PEN-ITLLNAVGT--NNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp TTS-CEEEEEEEC--SSCCCCEEECTTSSEEEEECS
T ss_pred Ccc-cceeeeccC--CCCCceEEECCCCCEEEEEEc
Confidence 622 111333332 356788888 444 5888654
No 82
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.49 E-value=1.5e-11 Score=107.67 Aligned_cols=186 Identities=14% Similarity=0.102 Sum_probs=127.3
Q ss_pred ccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEc
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVG 177 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~ 177 (332)
-.+|+++++ ++||++.... +.+.|.++|+++|++...+.++ ...+.-+++++. ++||+.++..+.++++|
T Consensus 22 ftqGL~~~~--~~LyestG~~---g~S~v~~vD~~tgkv~~~~~l~----~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGET---GRSSVRKVDLETGRILQRAEVP----PPYFGAGIVAWR-DRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp CEEEEEEET--TEEEEEECCT---TSCEEEEEETTTCCEEEEEECC----TTCCEEEEEEET-TEEEEEESSSSEEEEEE
T ss_pred ccccEEEEC--CEEEEECCCC---CCceEEEEECCCCCEEEEEeCC----CCcceeEEEEeC-CEEEEEEeeCCEEEEEE
Confidence 457999996 8999998642 2457999999999999888773 245778888874 57999999999999999
Q ss_pred CC-CceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEec--CCCCCCCC
Q 020019 178 VK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA--GGPLSFGD 253 (332)
Q Consensus 178 ~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~--g~~~~~pd 253 (332)
++ .+....+..+ ..|..+..|| +||+++. +++|+.+|+.+.+ .+..+.+. +.++..+.
T Consensus 92 ~~tl~~~~ti~~~-------------~~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~----~~~~I~V~~~g~~~~~lN 153 (243)
T 3mbr_X 92 LATLTPRARFRYP-------------GEGWALTSDDSHLYMSDG-TAVIRKLDPDTLQ----QVGSIKVTAGGRPLDNLN 153 (243)
T ss_dssp TTTTEEEEEEECS-------------SCCCEEEECSSCEEEECS-SSEEEEECTTTCC----EEEEEECEETTEECCCEE
T ss_pred CCcCcEEEEEeCC-------------CCceEEeeCCCEEEEECC-CCeEEEEeCCCCe----EEEEEEEccCCcccccce
Confidence 86 4444333211 1234444566 9999995 8999999999873 55666653 23345566
Q ss_pred eEEEeCCCeEEEEeCCc--eEEEEcCCCceEEEEEee-ec-------CCCcccceEEEE--ECCeEEEEEe
Q 020019 254 GLELLSPTKLVVAGNPS--ARLVESSDGWETAAVVAK-FS-------GPVHRLATAATV--KDGRVYLNHM 312 (332)
Q Consensus 254 Gi~~~~dG~l~va~~~~--~~~v~~~dg~~~~~~~~~-~~-------~~~~~~pt~va~--~~g~lyv~~~ 312 (332)
.|... +|+||+..... +.++...+|..++.+.-. +. .+....|.++|+ .+++|||+.+
T Consensus 154 eLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 154 ELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred eeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 77776 79999887543 333455667322222211 10 123357789999 4789999754
No 83
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.49 E-value=7.2e-12 Score=114.81 Aligned_cols=190 Identities=15% Similarity=0.133 Sum_probs=130.9
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEeccc-CcCCCccceEEEeCCCCeEEEEEeCcC-CCcc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDL-ELTGNGSLGLVLDHPRNRLLVVAADVF-GNKY 123 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gi~vd~~~g~l~v~~~~~~-~~~~ 123 (332)
.+.+++++++|++|++. ...|+++++.+++. . .+...+ +.....++++++|++ |++|+++.+.. ....
T Consensus 91 ~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~-----~--~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~~~~~~~~ 160 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS--DDGLFLRDTATGVL-----T--LHAELESDLPGNRSNDGRMHPS-GALWIGTMGRKAETGA 160 (326)
T ss_dssp CEEEEEEEETTEEEEEE--TTEEEEEETTTCCE-----E--EEECSSTTCTTEEEEEEEECTT-SCEEEEEEETTCCTTC
T ss_pred cceEEEEeCCCeEEEEE--CCCEEEEECCCCcE-----E--EEeeCCCCCCCCCCCCEEECCC-CCEEEEeCCCcCCCCc
Confidence 57789999999988876 45699999877652 1 232211 111236889999996 99999875311 0123
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC---C-ce---EEEecCCCCCCcc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK---G-EF---LSIISSPLFTPKE 195 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~---g-~~---~~~~~~~~~~~p~ 195 (332)
+.|+++| +++...... ....++++++++||+ +|++++..+.|++++.+ | +. ..+.....
T Consensus 161 ~~l~~~~--~g~~~~~~~------~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~----- 227 (326)
T 2ghs_A 161 GSIYHVA--KGKVTKLFA------DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTG----- 227 (326)
T ss_dssp EEEEEEE--TTEEEEEEE------EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTT-----
T ss_pred eEEEEEe--CCcEEEeeC------CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCC-----
Confidence 5789998 466543321 124688999999985 99999999999999864 5 32 11211100
Q ss_pred cccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEe-CC-CeEEEEeCC
Q 020019 196 WYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELL-SP-TKLVVAGNP 269 (332)
Q Consensus 196 ~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~-~d-G~l~va~~~ 269 (332)
....|+|++++++|.||++....++|++++++ + +.+..+..+ ...|.+++++ ++ +.||++...
T Consensus 228 ---~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g----~~~~~i~~~---~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 228 ---IKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-G----NHIARYEVP---GKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp ---SSSEEEEEEECTTSCEEEEEETTTEEEEECTT-C----CEEEEEECS---CSBEEEEEEESTTSCEEEEEEBC
T ss_pred ---CCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-C----CEEEEEECC---CCCcEEEEEecCCCCEEEEEecC
Confidence 12357899999999999999888899999985 4 245556544 2468899998 77 569999754
No 84
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.48 E-value=1.1e-10 Score=104.66 Aligned_cols=191 Identities=13% Similarity=0.103 Sum_probs=138.3
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
..+++++++++|++|+ + ..+.|+.+++ +++. .- ++. .+. .....+..+.++ |++++++.+. ..
T Consensus 37 ~~~~~~~~~pdG~ilv-s-~~~~V~~~d~-~G~~----~W--~~~-~~~--~~~~~~~~~~~d-G~~lv~~~~~----~~ 99 (276)
T 3no2_A 37 WECNSVAATKAGEILF-S-YSKGAKMITR-DGRE----LW--NIA-APA--GCEMQTARILPD-GNALVAWCGH----PS 99 (276)
T ss_dssp CCCCEEEECTTSCEEE-E-CBSEEEEECT-TSCE----EE--EEE-CCT--TCEEEEEEECTT-SCEEEEEEST----TE
T ss_pred CCCcCeEECCCCCEEE-e-CCCCEEEECC-CCCE----EE--EEc-CCC--CccccccEECCC-CCEEEEecCC----CC
Confidence 3688999999999888 3 3678999999 5652 11 221 111 124567778886 8888887531 35
Q ss_pred eEEEEECCCCcEEEEEecCCCCC-CCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCcccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSD-GKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGL 203 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~-~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~ 203 (332)
+++.+|+ +|+.++.+.+..... ....+.+++++++|+++++++..+.|+.+|++|+....+..+ ..+
T Consensus 100 ~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~-----------~~~ 167 (276)
T 3no2_A 100 TILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLS-----------GTP 167 (276)
T ss_dssp EEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECS-----------SCC
T ss_pred EEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECC-----------CCc
Confidence 7888987 678777776632111 113577899999999999999999999999999866444321 235
Q ss_pred CeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEec---CCCCCCCCeEEEeCCCeEEEEeC
Q 020019 204 NGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA---GGPLSFGDGLELLSPTKLVVAGN 268 (332)
Q Consensus 204 nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~---g~~~~~pdGi~~~~dG~l~va~~ 268 (332)
.++.+.++|.++++...+++|+.+++++++ .+-.+... +..+..|.++++.++|++|+++.
T Consensus 168 ~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~----~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 168 FSSAFLDNGDCLVACGDAHCFVQLNLESNR----IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CEEEECTTSCEEEECBTTSEEEEECTTTCC----EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred cceeEcCCCCEEEEeCCCCeEEEEeCcCCc----EEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 688999999999999989999999999873 45445422 22356689999999999999983
No 85
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.48 E-value=2.9e-11 Score=114.45 Aligned_cols=241 Identities=12% Similarity=0.063 Sum_probs=151.7
Q ss_pred CCCCEEEEE-ecCCeEEEEECCCCCCCccceeeeEEecccCc---CC-CccceEEEeCCCCeEEEEEeCcC-CCccceEE
Q 020019 54 DSGRRFIVS-FLDGGIGQVAVPDDYPPGTVLEEVTLVKDLEL---TG-NGSLGLVLDHPRNRLLVVAADVF-GNKYSAVA 127 (332)
Q Consensus 54 ~~g~~~~~~-~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~gi~vd~~~g~l~v~~~~~~-~~~~~~l~ 127 (332)
.+++.+++. +.+++|+.+|..+.... .+....++..+. .+ ..|.++...++ | +||+..+.. +...+.+.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~---p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd-G-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPRE---PKIIKVIEPEEVKKVSGYSRLHTVHCGPD-A-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTS---CEEEEEECHHHHHHHHCEEEEEEEEECSS-C-EEEEEEEETTSCSCCEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCC---ceeeeeechhhcccccCCCcccceeECCC-e-EEEEcCCCcCCCCCCeEE
Confidence 777766655 88899999997533110 011123310011 12 26899999996 7 899876531 12346799
Q ss_pred EEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCC------------------CCeEEEEcCC-CceEEEec
Q 020019 128 AYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVT------------------GSKIWKVGVK-GEFLSIIS 187 (332)
Q Consensus 128 ~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~------------------~~~I~~v~~~-g~~~~~~~ 187 (332)
.+|.+++++...+... .....++.|+.+.|+++ +|+++++ ..+|..+|.+ ++....+.
T Consensus 168 vlD~~T~~v~~~~~~~--~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 168 MLDHYSFEPLGKWEID--RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp EECTTTCCEEEECCSB--CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred EEECCCCeEEEEEccC--CCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 9999999988777653 12246788999999987 5666653 6889999976 44333332
Q ss_pred CCCCCCcccccCccccCeEEE--ccCc-eEEEEeC-----CCCeEEEEeCCCCCCccceeEEEEecCC----C-------
Q 020019 188 SPLFTPKEWYKNLVGLNGIVY--HPDG-FLIVIHT-----FSGNLFKIDIVDGVGEGEEIKLIRVAGG----P------- 248 (332)
Q Consensus 188 ~~~~~~p~~~~~~~~~nGi~~--~~dG-~Lyva~~-----~~~~i~~id~~~~~~~~~~~~~v~~~g~----~------- 248 (332)
.+. ...+|.+|.+ +|+| ++||+.. .+++|+.+..+.+.. +..+.+.++.. .
T Consensus 246 vg~--------~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~--~~~~vIdi~~~~v~~~lp~~~~~ 315 (462)
T 2ece_A 246 LGE--------ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW--NAEKVIEIPAEPLEGNLPEILKP 315 (462)
T ss_dssp SCT--------TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE--EEEEEEEECCEECCSSCCGGGGG
T ss_pred cCC--------CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce--eEEEEEeCCCccccccccccccc
Confidence 210 1235678877 9999 9999999 999998777665422 12233322210 0
Q ss_pred ----CCCCCeEEEeCCCe-EEEEeCC--ceEEEEcCCCceEEEEEeeecCCCc-------------ccceEEEE--ECCe
Q 020019 249 ----LSFGDGLELLSPTK-LVVAGNP--SARLVESSDGWETAAVVAKFSGPVH-------------RLATAATV--KDGR 306 (332)
Q Consensus 249 ----~~~pdGi~~~~dG~-l~va~~~--~~~~v~~~dg~~~~~~~~~~~~~~~-------------~~pt~va~--~~g~ 306 (332)
.+.|.+|.+++||+ |||++.. ...++...+. ...++...+...+. .+|..+++ ++++
T Consensus 316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~-~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP-FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSST-TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSE
T ss_pred cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCE
Confidence 14689999999976 9999853 3344444333 22345554443211 25889999 5779
Q ss_pred EEEEEe
Q 020019 307 VYLNHM 312 (332)
Q Consensus 307 lyv~~~ 312 (332)
|||+|.
T Consensus 395 LyVaNs 400 (462)
T 2ece_A 395 VYVTNS 400 (462)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999883
No 86
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.47 E-value=1.6e-11 Score=114.17 Aligned_cols=241 Identities=10% Similarity=0.029 Sum_probs=131.2
Q ss_pred CCccccceEEcCCCCEEEEE-e---------cCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEE
Q 020019 43 SSFFRECAKWDDSGRRFIVS-F---------LDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLL 112 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~-~---------~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~ 112 (332)
.+..| +++++++|+.+|+. . .++.|..+|..+.+ +..+..........+..|.+|+++++..+||
T Consensus 49 ~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~----~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 49 TAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT----FEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp CCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC----EEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred CCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc----EEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 35678 99999999876665 2 23569999987665 2221111110001234789999999855788
Q ss_pred EEEeCcCCCccceEEEEECCCCcEEEE-EecCCCCCCCCCccc----eEECCCCcE-EEEeCCCCeEE------------
Q 020019 113 VVAADVFGNKYSAVAAYDLSTWNRLFL-TQLSGPSDGKSCADD----VTVDAEGNA-YVTDVTGSKIW------------ 174 (332)
Q Consensus 113 v~~~~~~~~~~~~l~~~d~~~g~~~~~-~~l~~~~~~~~~~nd----iavd~dG~l-yvtd~~~~~I~------------ 174 (332)
+++.. ..+.|.+||.++++.... +...+...-..+|.+ +++.++|.+ |+.....+.+.
T Consensus 124 v~n~~----~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~ 199 (361)
T 2oiz_A 124 LQNAS----PATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVK 199 (361)
T ss_dssp EEEES----SSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTT
T ss_pred EECCC----CCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCC
Confidence 88753 135789999999887654 333110000012222 555555543 33322212221
Q ss_pred ----------------EEcCCCceEEEecCCCCC----Cc------ccccCc---cccCeEEEccCc-eEEEEeC-----
Q 020019 175 ----------------KVGVKGEFLSIISSPLFT----PK------EWYKNL---VGLNGIVYHPDG-FLIVIHT----- 219 (332)
Q Consensus 175 ----------------~v~~~g~~~~~~~~~~~~----~p------~~~~~~---~~~nGi~~~~dG-~Lyva~~----- 219 (332)
.++.+++... ++...-. .+ ...... .++..+++++|| ++|++..
T Consensus 200 ~~~~~~~~~~~g~~~~~~~~~~~v~v-~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~ 278 (361)
T 2oiz_A 200 DDPIFIAPALDKDKAHFVSYYGNVYS-ADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKE 278 (361)
T ss_dssp TSCBCSCCEECSSEEEEEBTTSEEEE-EECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCT
T ss_pred CCceEEEecccCCEEEEEeCCCeEEE-EEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCc
Confidence 1111111111 0000000 00 000001 223349999998 9999875
Q ss_pred -----CCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeCCceEEEEcCCCceEEEEEeeecCCC
Q 020019 220 -----FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGNPSARLVESSDGWETAAVVAKFSGPV 293 (332)
Q Consensus 220 -----~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~~~~~~v~~~dg~~~~~~~~~~~~~~ 293 (332)
.+++|+.||+.++ +.+..+... . |.+|++++||+ ||+++.+...++...++ +. +++..+. +.
T Consensus 279 ~~~~~~~~~v~viD~~t~----~~v~~i~~~----~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~-~l-~~~~~i~-~~ 346 (361)
T 2oiz_A 279 GTHKFPAAEIWVMDTKTK----QRVARIPGR----D-ALSMTIDQQRNLMLTLDGGNVNVYDISQP-EP-KLLRTIE-GA 346 (361)
T ss_dssp TCTTCCCSEEEEEETTTT----EEEEEEECT----T-CCEEEEETTTTEEEEECSSCEEEEECSSS-SC-EEEEEET-TS
T ss_pred ccccCCCceEEEEECCCC----cEEEEEecC----C-eeEEEECCCCCEEEEeCCCeEEEEECCCC-cc-eeeEEec-cC
Confidence 2458999999987 356666654 2 99999999976 66666533343344433 11 4445442 12
Q ss_pred cccceEEEE-ECC
Q 020019 294 HRLATAATV-KDG 305 (332)
Q Consensus 294 ~~~pt~va~-~~g 305 (332)
...|..+++ .+|
T Consensus 347 G~~P~~~~~~p~G 359 (361)
T 2oiz_A 347 AEASLQVQFHPVG 359 (361)
T ss_dssp CSSEEEEEECCCS
T ss_pred CCCcEEEEecCCC
Confidence 457888888 454
No 87
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.47 E-value=6.3e-11 Score=104.85 Aligned_cols=196 Identities=15% Similarity=0.174 Sum_probs=131.5
Q ss_pred ccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEc
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVG 177 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~ 177 (332)
.+.||++++++++||++... .+.|+.+|++ |++...+.+. +..-+-||+++++|.+|+++...++++.++
T Consensus 28 ~lSGla~~~~~~~L~aV~d~-----~~~I~~ld~~-g~v~~~i~l~----g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINK-----PAAIVEMTTN-GDLIRTIPLD----FVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp CEEEEEEETTTTEEEEEEET-----TEEEEEEETT-CCEEEEEECS----SCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred CcceeEEeCCCCEEEEEECC-----CCeEEEEeCC-CCEEEEEecC----CCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 58899999987899998763 5679999998 8888877773 235688999999998999998889888775
Q ss_pred --CCCceE--EEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCC-eEEEEeCCCCCCccceeEEEEe----cCC
Q 020019 178 --VKGEFL--SIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSG-NLFKIDIVDGVGEGEEIKLIRV----AGG 247 (332)
Q Consensus 178 --~~g~~~--~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~-~i~~id~~~~~~~~~~~~~v~~----~g~ 247 (332)
.+++.. .....+.... +...+.-||++++++ +||++..... +||+++--.. +...+...- ...
T Consensus 98 v~~~~~i~~~~~~~~~~~~~----~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~---~~~l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQES----PTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLS---SNELHISKDKALQRQF 170 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSC----CCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTC---SSCCEEEECHHHHHTC
T ss_pred cCCCCeeeeeeeeccccccc----cccCCcceEEEeCCCCEEEEEECcCCceEEEEccccc---CCceeeecchhhcccc
Confidence 445422 1121111111 123467899999998 9999988766 8999982101 112222221 112
Q ss_pred CCCCCCeEEEeCC-CeEEEEeCCceEEE-EcCCCceEEEEEeeecC-----CCcccceEEEE-ECCeEEEEE
Q 020019 248 PLSFGDGLELLSP-TKLVVAGNPSARLV-ESSDGWETAAVVAKFSG-----PVHRLATAATV-KDGRVYLNH 311 (332)
Q Consensus 248 ~~~~pdGi~~~~d-G~l~va~~~~~~~v-~~~dg~~~~~~~~~~~~-----~~~~~pt~va~-~~g~lyv~~ 311 (332)
.+..+.++++|+. |+||+....+..++ ...+| +......-..+ ..+.+|.++|+ .+|+|||++
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 3456899999987 89999986654444 44556 32222221111 13578999999 789999964
No 88
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.47 E-value=2.3e-11 Score=107.59 Aligned_cols=208 Identities=11% Similarity=0.121 Sum_probs=137.2
Q ss_pred cccceEEcCCCC-EEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDSGR-RFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~g~-~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
.+.|++++++++ +|.+.-..++|+++|++ ++ +.. .+. -.+. .-+.||+++++ |++||++.. ..
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~----v~~--~i~-l~g~--~D~EGIa~~~~-g~~~vs~E~-----~~ 91 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD----LIR--TIP-LDFV--KDLETIEYIGD-NQFVISDER-----DY 91 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CC----EEE--EEE-CSSC--SSEEEEEECST-TEEEEEETT-----TT
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC----EEE--EEe-cCCC--CChHHeEEeCC-CEEEEEECC-----CC
Confidence 688999999866 44445557899999997 54 222 221 1121 25789999986 888888753 45
Q ss_pred eEEEEECCCCc---EEEEEecCC-CCCCCCCccceEECCCC-cEEEEeCCCC-eEEEEc--CCCceEEEecCCCCCCccc
Q 020019 125 AVAAYDLSTWN---RLFLTQLSG-PSDGKSCADDVTVDAEG-NAYVTDVTGS-KIWKVG--VKGEFLSIISSPLFTPKEW 196 (332)
Q Consensus 125 ~l~~~d~~~g~---~~~~~~l~~-~~~~~~~~ndiavd~dG-~lyvtd~~~~-~I~~v~--~~g~~~~~~~~~~~~~p~~ 196 (332)
.+++|+..... ......++- ....+...-++++|+++ ++|++..... .||.++ +.++.......+.+..+
T Consensus 92 ~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~-- 169 (255)
T 3qqz_A 92 AIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQ-- 169 (255)
T ss_dssp EEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHT--
T ss_pred cEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccc--
Confidence 78888765433 223333321 11234567899999986 6999877666 899998 22221222221111000
Q ss_pred ccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecC------CCCCCCCeEEEeCCCeEEEEeCC
Q 020019 197 YKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAG------GPLSFGDGLELLSPTKLVVAGNP 269 (332)
Q Consensus 197 ~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g------~~~~~pdGi~~~~dG~l~va~~~ 269 (332)
.....+-+|+++|.- +||+....+++|..+|.+.. .+..+.+.. ..+..|.||++|++|+|||++..
T Consensus 170 -~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-----~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 170 -FTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-----VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp -CCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-----EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred -cccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-----EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC
Confidence 012457899999986 99999999999999998854 566666652 12468999999999999999865
Q ss_pred ceEEEEcC
Q 020019 270 SARLVESS 277 (332)
Q Consensus 270 ~~~~v~~~ 277 (332)
+..+++.+
T Consensus 244 n~~y~f~~ 251 (255)
T 3qqz_A 244 NRFYRFTP 251 (255)
T ss_dssp TEEEEEEC
T ss_pred ceEEEEEe
Confidence 54445544
No 89
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.46 E-value=2.2e-10 Score=103.52 Aligned_cols=242 Identities=10% Similarity=0.091 Sum_probs=143.0
Q ss_pred CCccccceEEcCCCCEEEEE-ecCCeEEEEECC--CCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 43 SSFFRECAKWDDSGRRFIVS-FLDGGIGQVAVP--DDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~-~~~g~I~~vd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
....|.+++++++|+.+++. ..++.|..++.+ +++. + .+...+. +..+.+++++++...||++...
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~-----~--~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~-- 104 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL-----T--FAAESAL--PGSLTHISTDHQGQFVFVGSYN-- 104 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE-----E--EEEEEEC--SSCCSEEEECTTSSEEEEEETT--
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce-----e--ecccccc--CCCCcEEEEcCCCCEEEEEecC--
Confidence 34478899999999966555 444888776655 4442 1 1111111 1268899999974457777642
Q ss_pred CCccceEEEEECCCCcEEEEE-ecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC--CceEEEecCCCCCCcc
Q 020019 120 GNKYSAVAAYDLSTWNRLFLT-QLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK--GEFLSIISSPLFTPKE 195 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~-~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~--g~~~~~~~~~~~~~p~ 195 (332)
.+.+.+||.+.++..... .+. ....+++++++|+|+ +|+++...+.|+.++.+ ++....... ....
T Consensus 105 ---~~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~-- 174 (343)
T 1ri6_A 105 ---AGNVSVTRLEDGLPVGVVDVVE----GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPA-EVTT-- 174 (343)
T ss_dssp ---TTEEEEEEEETTEEEEEEEEEC----CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-EEEC--
T ss_pred ---CCeEEEEECCCCcccccccccc----CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccc-cccc--
Confidence 356888988433322222 221 134688999999986 89998778888887754 554322100 0000
Q ss_pred cccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCC--CCCccceeEEEE-ecC--CCCCCCCeEEEeCCCe-EEEEeC
Q 020019 196 WYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVD--GVGEGEEIKLIR-VAG--GPLSFGDGLELLSPTK-LVVAGN 268 (332)
Q Consensus 196 ~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~--~~~~~~~~~~v~-~~g--~~~~~pdGi~~~~dG~-l~va~~ 268 (332)
.....+.+++++||| .||++....++|..++++. ++. .....+. .+. .....|.+++++++|+ ||+++.
T Consensus 175 --~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~ 250 (343)
T 1ri6_A 175 --VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI--ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR 250 (343)
T ss_dssp --STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCC--EEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET
T ss_pred --CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcE--EEEeeccccCccccccCCccceEECCCCCEEEEEec
Confidence 012357799999999 7999998899999998853 321 1122232 110 0123456899999985 777763
Q ss_pred C--ceEEEEcCC-CceEEEEEeeecCCCcccceEEEE-E-CCeEEEEEe
Q 020019 269 P--SARLVESSD-GWETAAVVAKFSGPVHRLATAATV-K-DGRVYLNHM 312 (332)
Q Consensus 269 ~--~~~~v~~~d-g~~~~~~~~~~~~~~~~~pt~va~-~-~g~lyv~~~ 312 (332)
. ...+..... + ...+....+... ..|.++++ . +..||+++.
T Consensus 251 ~~~~i~v~d~~~~~-~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 251 TASLITVFSVSEDG-SVLSKEGFQPTE--TQPRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp TTTEEEEEEECTTS-CCEEEEEEEECS--SSCCCEEECTTSSEEEEECT
T ss_pred CCCEEEEEEEcCCC-CceEEeeeecCC--CccceEEECCCCCEEEEecC
Confidence 2 233333331 2 122344444322 23788888 4 456887654
No 90
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.45 E-value=6.3e-11 Score=107.20 Aligned_cols=230 Identities=14% Similarity=0.152 Sum_probs=141.7
Q ss_pred cccceEEcCCCCEEEEE-ecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDSGRRFIVS-FLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~-~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
.|.+++++++|+.+++. ..++.|..++..++.. .+..... +. +..+.+++++++...+|+++.. .+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~----~~~~~~~--~~--~~~~~~~~~s~dg~~l~~~~~~-----~~ 151 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP----VGVVDVV--EG--LDGCHSANISPDNRTLWVPALK-----QD 151 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE----EEEEEEE--CC--CTTBCCCEECTTSSEEEEEEGG-----GT
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc----ccccccc--cC--CCCceEEEECCCCCEEEEecCC-----CC
Confidence 78999999999966555 5578888888742321 0111111 11 1257899999974468888732 35
Q ss_pred eEEEEECCC-CcEEEEE--ecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC---CceEEEecCCCCCCcccc
Q 020019 125 AVAAYDLST-WNRLFLT--QLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK---GEFLSIISSPLFTPKEWY 197 (332)
Q Consensus 125 ~l~~~d~~~-g~~~~~~--~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~---g~~~~~~~~~~~~~p~~~ 197 (332)
.+.+||.++ ++..... .+..+ ....|.+++++|+|+ +|+++...+.|..++.+ |+........... ...
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~--~~~ 227 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTV--EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMP--ENF 227 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECS--TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSC--TTC
T ss_pred EEEEEEecCCCceeeecccccccC--CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccC--ccc
Confidence 789999987 6654432 22111 135788999999997 89999888988888864 3332111100110 000
Q ss_pred cCccccCeEEEccCc-eEEEEeCCCCeEEEEeCC--CCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeCC--ce
Q 020019 198 KNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIV--DGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGNP--SA 271 (332)
Q Consensus 198 ~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~--~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~~--~~ 271 (332)
.....+.+++++||| .||++....+.|..++++ +++. ..+..+... ..|.+++++++|+ ||+++.. ..
T Consensus 228 ~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~--~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~~~~v 301 (343)
T 1ri6_A 228 SDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVL--SKEGFQPTE----TQPRGFNVDHSGKYLIAAGQKSHHI 301 (343)
T ss_dssp CSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCE--EEEEEEECS----SSCCCEEECTTSSEEEEECTTTCEE
T ss_pred cccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCce--EEeeeecCC----CccceEEECCCCCEEEEecCCCCeE
Confidence 112346689999999 999999888999888887 3311 122223322 3489999999987 7777632 22
Q ss_pred EEE--EcCCCceEEEEEeeecCCCcccceEEEE
Q 020019 272 RLV--ESSDGWETAAVVAKFSGPVHRLATAATV 302 (332)
Q Consensus 272 ~~v--~~~dg~~~~~~~~~~~~~~~~~pt~va~ 302 (332)
.+. ....| +. +.+..+.. ...|.++++
T Consensus 302 ~v~~~d~~~g-~~-~~~~~~~~--g~~p~~i~~ 330 (343)
T 1ri6_A 302 SVYEIVGEQG-LL-HEKGRYAV--GQGPMWVVV 330 (343)
T ss_dssp EEEEEETTTT-EE-EEEEEEEC--SSSCCEEEE
T ss_pred EEEEEcCCCc-ee-eEcccccc--CCCCeeEEE
Confidence 222 33345 33 33334432 356899998
No 91
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.45 E-value=3.9e-12 Score=112.37 Aligned_cols=182 Identities=14% Similarity=0.120 Sum_probs=125.4
Q ss_pred cceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcC
Q 020019 99 SLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGV 178 (332)
Q Consensus 99 ~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~ 178 (332)
..||.++. ++||++... .+.|.++|+++|++.... ++ ...|.-|++++.+ .||+.++..+.++++|+
T Consensus 57 tqGL~~~~--~~Ly~stG~-----~g~v~~iD~~Tgkv~~~~-l~----~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGH-----QGTLRQLSLESAQPVWME-RL----GNIFAEGLASDGE-RLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp EEEEEEET--TEEEEEETT-----TTEEEECCSSCSSCSEEE-EC----TTCCEEEEEECSS-CEEEEESSSCEEEEEET
T ss_pred cceEEEEC--CEEEEEcCC-----CCEEEEEECCCCcEEeEE-CC----CCcceeEEEEeCC-EEEEEEccCCEEEEEEC
Confidence 47999984 899999874 346999999999988777 63 1457778988754 79999999999999998
Q ss_pred C-CceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEec--CCCCCCCCe
Q 020019 179 K-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA--GGPLSFGDG 254 (332)
Q Consensus 179 ~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~--g~~~~~pdG 254 (332)
+ .+....+..+ ...-|++. || +||+++ .+++|+.+|+++.+ .+..+.+. +.++..+..
T Consensus 124 ~Tl~~~~ti~~~-----------~eGwGLt~--Dg~~L~vSd-Gs~~l~~iDp~T~~----v~~~I~V~~~g~~v~~lNe 185 (268)
T 3nok_A 124 MPPQRERTTRYS-----------GEGWGLCY--WNGKLVRSD-GGTMLTFHEPDGFA----LVGAVQVKLRGQPVELINE 185 (268)
T ss_dssp TTTEEEEEEECS-----------SCCCCEEE--ETTEEEEEC-SSSEEEEECTTTCC----EEEEEECEETTEECCCEEE
T ss_pred CcCcEEEEEeCC-----------CceeEEec--CCCEEEEEC-CCCEEEEEcCCCCe----EEEEEEeCCCCcccccccc
Confidence 7 4544333211 11246664 56 999999 59999999999873 56666653 234456678
Q ss_pred EEEeCCCeEEEEeCCc--eEEEEcCCCceEEEEEee-e-------cCCCcccceEEEE--ECCeEEEEEe
Q 020019 255 LELLSPTKLVVAGNPS--ARLVESSDGWETAAVVAK-F-------SGPVHRLATAATV--KDGRVYLNHM 312 (332)
Q Consensus 255 i~~~~dG~l~va~~~~--~~~v~~~dg~~~~~~~~~-~-------~~~~~~~pt~va~--~~g~lyv~~~ 312 (332)
|++. +|+||+..... +.++...+|..++.+.-. + ..+....|.++|+ .+++|||+.+
T Consensus 186 Le~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 186 LECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred cEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 8887 78999887543 333455667222222211 1 0112357789999 4789999765
No 92
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.44 E-value=1.3e-10 Score=114.10 Aligned_cols=233 Identities=15% Similarity=0.144 Sum_probs=154.2
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEEC--CCCCCCccceeeeEEecccCcCCCccceEEEeC----CCCeEEEEEeCc
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAV--PDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDH----PRNRLLVVAADV 118 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~----~~g~l~v~~~~~ 118 (332)
..|++++++++|+.+|+...++.|..+|. .+++ +.. ++. .+..|.++++++ +...||+++..
T Consensus 179 ~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~----~~~--~i~-----~g~~p~~va~sp~~~~dg~~l~v~~~~- 246 (543)
T 1nir_A 179 YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT----KVA--EIK-----IGIEARSVESSKFKGYEDRYTIAGAYW- 246 (543)
T ss_dssp TTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE----EEE--EEE-----CCSEEEEEEECCSTTCTTTEEEEEEEE-
T ss_pred cccceEEECCCCCEEEEECCCCeEEEEECcCCCCc----EEE--EEe-----cCCCcceEEeCCCcCCCCCEEEEEEcc-
Confidence 34789999999998877755699999998 4443 111 221 134789999999 85678888742
Q ss_pred CCCccceEEEEECCCCcEEEEEecCCC-CC-----CCCCccceEECCCC-cEEEEeCCCCeEEEEcCCC-ceEE--EecC
Q 020019 119 FGNKYSAVAAYDLSTWNRLFLTQLSGP-SD-----GKSCADDVTVDAEG-NAYVTDVTGSKIWKVGVKG-EFLS--IISS 188 (332)
Q Consensus 119 ~~~~~~~l~~~d~~~g~~~~~~~l~~~-~~-----~~~~~ndiavd~dG-~lyvtd~~~~~I~~v~~~g-~~~~--~~~~ 188 (332)
.+.+.+||.++++....+...+. .. ....+..++++++| .+|++....+.|+.++... +... .+..
T Consensus 247 ----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~ 322 (543)
T 1nir_A 247 ----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA 322 (543)
T ss_dssp ----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC
T ss_pred ----CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc
Confidence 35688999999988877665210 00 12367789999986 5889999999999999753 2211 1211
Q ss_pred CCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCC-CeEEE-eCC-CeEE
Q 020019 189 PLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFG-DGLEL-LSP-TKLV 264 (332)
Q Consensus 189 ~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~p-dGi~~-~~d-G~l~ 264 (332)
...+.+++|+||| ++|+++..+++|..+|+.+++ .+..+... ..+.| .|+.+ +++ |.+|
T Consensus 323 -----------~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~----l~~~i~~g--~~ph~g~g~~~~~p~~g~~~ 385 (543)
T 1nir_A 323 -----------APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRR----LSALVDVG--KTPHPGRGANFVHPKYGPVW 385 (543)
T ss_dssp -----------CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTE----EEEEEECS--SSBCCTTCEEEEETTTEEEE
T ss_pred -----------CcCccCceECCCCCEEEEEecCCCeEEEEECCCCe----EEEeeccC--CCCCCCCCcccCCCCCccEE
Confidence 1347799999999 899999999999999999873 45555543 11222 35554 676 8899
Q ss_pred EEeC---CceEEEEcCCC------ceEEEEEeeecCCCcccceEEEE--ECCeEEEEEecC
Q 020019 265 VAGN---PSARLVESSDG------WETAAVVAKFSGPVHRLATAATV--KDGRVYLNHMLG 314 (332)
Q Consensus 265 va~~---~~~~~v~~~dg------~~~~~~~~~~~~~~~~~pt~va~--~~g~lyv~~~~g 314 (332)
+++. +.+.++...+. |+ ++..+... ...+..+++ ++.+||+.++++
T Consensus 386 ~s~~~~d~~V~v~d~~~~~~~~~~~~---~v~~l~~~-g~~~~~v~~~pdg~~l~v~~~~~ 442 (543)
T 1nir_A 386 STSHLGDGSISLIGTDPKNHPQYAWK---KVAELQGQ-GGGSLFIKTHPKSSHLYVDTTFN 442 (543)
T ss_dssp EEEBSSSSEEEEEECCTTTCTTTBTS---EEEEEECS-CSCCCCEECCTTCCEEEECCTTC
T ss_pred EeccCCCceEEEEEeCCCCCchhcCe---EEEEEEcC-CCCceEEEcCCCCCcEEEecCCC
Confidence 9964 23343444431 44 33434322 123455777 568999977543
No 93
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.42 E-value=1.1e-10 Score=109.61 Aligned_cols=221 Identities=14% Similarity=0.114 Sum_probs=148.9
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
...++++++++++|++...++.|..++..+++. .. .+. . .+..+.+++++++...+|++... .+.
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~----~~--~~~-~---~~~~~~~~~~~~~~~~l~~~~~~-----~~~ 235 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAY----KA--TVD-L---TGKWSKILLYDPIRDLVYCSNWI-----SED 235 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCE----EE--EEE-C---SSSSEEEEEEETTTTEEEEEETT-----TTE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceE----EE--EEc-C---CCCCeeEEEEcCCCCEEEEEecC-----CCc
Confidence 345689999999888887789999999876652 11 222 1 12367899999975567677632 357
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeC-------CCCeEEEEcCC-CceEEEecCCCCCCccc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDV-------TGSKIWKVGVK-GEFLSIISSPLFTPKEW 196 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~-------~~~~I~~v~~~-g~~~~~~~~~~~~~p~~ 196 (332)
|.+||+++++....... ...+.+++++|+|+ +|++.. ..+.|+.++.. ++.......
T Consensus 236 i~~~d~~~~~~~~~~~~------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-------- 301 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDK------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-------- 301 (433)
T ss_dssp EEEEETTTTEEEEECCC------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE--------
T ss_pred EEEEECCCCcEEEEecC------CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC--------
Confidence 99999998876543322 24588999999985 677664 35688899976 444333211
Q ss_pred ccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeCC-----
Q 020019 197 YKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGNP----- 269 (332)
Q Consensus 197 ~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~~----- 269 (332)
...+.+++++|+| .||++....++|..++++++ +.+..+... ..+.+++++++|+ ||++...
T Consensus 302 ---~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~----~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~~~~~~ 370 (433)
T 3bws_A 302 ---PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK----KVQKSIPVF----DKPNTIALSPDGKYLYVSCRGPNHPT 370 (433)
T ss_dssp ---EECEEEEEECSSTTEEEEEETTTTEEEEEETTTT----EEEEEEECS----SSEEEEEECTTSSEEEEEECCCCCTT
T ss_pred ---CCCcceEEECCCCCEEEEEecCCCEEEEEECCCC----cEEEEecCC----CCCCeEEEcCCCCEEEEEecCCCccc
Confidence 1246789999999 89999999999999999876 234444422 4678999999986 7777532
Q ss_pred -----------ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-EC-CeEEEEEe
Q 020019 270 -----------SARLVESSDGWETAAVVAKFSGPVHRLATAATV-KD-GRVYLNHM 312 (332)
Q Consensus 270 -----------~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~-g~lyv~~~ 312 (332)
...+....++ ++...+.. ...|+++++ .+ ..||++..
T Consensus 371 ~~~~~~g~~dg~v~~~d~~~~----~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 371 EGYLKKGLVLGKVYVIDTTTD----TVKEFWEA--GNQPTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp TCTTSCCSSCCEEEEEETTTT----EEEEEEEC--SSSEEEEEECTTSCEEEEEET
T ss_pred cccccccccceEEEEEECCCC----cEEEEecC--CCCCceEEEcCCCCEEEEEEC
Confidence 3344445555 33333332 345788998 44 45666554
No 94
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.41 E-value=4e-11 Score=113.93 Aligned_cols=244 Identities=10% Similarity=0.032 Sum_probs=139.9
Q ss_pred CCCC-EEEEEecC----CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC----CCccc
Q 020019 54 DSGR-RFIVSFLD----GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF----GNKYS 124 (332)
Q Consensus 54 ~~g~-~~~~~~~~----g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~----~~~~~ 124 (332)
++++ +|+++... +.|.++|+.+.+ +.. ++. .|..| ||+++++..+|||++.... ....+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~----vv~--~I~-----vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~ 149 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGR----ILG--MTD-----GGFLP-HPVAAEDGSFFAQASTVFERIARGKRTD 149 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTE----EEE--EEE-----ECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCE----EEE--EEE-----CCCCC-ceEECCCCCEEEEEeccccccccCCCCC
Confidence 4555 55555533 799999998775 222 221 12368 9999998778999974210 00135
Q ss_pred eEEEEECCCCcEEEEEecCCCCC--CCCCccceEECCCCc-EEEEeCC-CCeEEEEcCC-CceEEEecCCCCC--Ccc--
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSD--GKSCADDVTVDAEGN-AYVTDVT-GSKIWKVGVK-GEFLSIISSPLFT--PKE-- 195 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~--~~~~~ndiavd~dG~-lyvtd~~-~~~I~~v~~~-g~~~~~~~~~~~~--~p~-- 195 (332)
.|.++|.+++++...+.+.++.. ....|.+++++|||+ +||++.. .+.|.+||.. ++....+..+... .|.
T Consensus 150 ~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~ 229 (426)
T 3c75_H 150 YVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASP 229 (426)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEET
T ss_pred EEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCC
Confidence 68999999999988887742111 125799999999985 9999875 7899999987 3443222211100 000
Q ss_pred ----------------c------------ccCcccc--CeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEe
Q 020019 196 ----------------W------------YKNLVGL--NGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRV 244 (332)
Q Consensus 196 ----------------~------------~~~~~~~--nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~ 244 (332)
. ......| ..+.++++| .+|+... .++++.+|..+.+. ..+..+..
T Consensus 230 ~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~--~v~~~~~~ 306 (426)
T 3c75_H 230 TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGA--TFRAPIEA 306 (426)
T ss_dssp TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCE--EECCCEES
T ss_pred cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCce--EEeeeeee
Confidence 0 0000000 123445555 5555543 45666666654311 00011111
Q ss_pred cC-C--CC-CCCCe---EEEeCC-CeEEEEeC-----------CceEEEEcCCCceEEEEEeeecCCCcccceEEEE-E-
Q 020019 245 AG-G--PL-SFGDG---LELLSP-TKLVVAGN-----------PSARLVESSDGWETAAVVAKFSGPVHRLATAATV-K- 303 (332)
Q Consensus 245 ~g-~--~~-~~pdG---i~~~~d-G~l~va~~-----------~~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~- 303 (332)
.. . .. ..|.| +++++| +++||++. +...++..... ++++.+..+ ..|.++++ .
T Consensus 307 ~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~----kvv~~I~vg--~~P~gia~spD 380 (426)
T 3c75_H 307 LTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG----ERINKIELG--HEIDSINVSQD 380 (426)
T ss_dssp SCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC----CEEEEEEEE--EEECEEEECCS
T ss_pred ccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC----eEEEEEECC--CCcCeEEEccC
Confidence 00 0 00 13555 899988 67999962 12344455555 455554432 35899999 4
Q ss_pred CC-eEEEEEecCcccc
Q 020019 304 DG-RVYLNHMLGFGYP 318 (332)
Q Consensus 304 ~g-~lyv~~~~g~~~~ 318 (332)
++ +||++++....++
T Consensus 381 g~~~lyv~n~~s~~Vs 396 (426)
T 3c75_H 381 AEPLLYALSAGTQTLH 396 (426)
T ss_dssp SSCEEEEEETTTTEEE
T ss_pred CCEEEEEEcCCCCeEE
Confidence 45 6888888777665
No 95
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.41 E-value=1.9e-10 Score=105.93 Aligned_cols=232 Identities=13% Similarity=0.126 Sum_probs=134.2
Q ss_pred CCccccceEEcCCCCEEEE-EecCCeEEEEECCCCCCCccceeeeEEecccCc-------CCCccceEEEeCCCCeEEEE
Q 020019 43 SSFFRECAKWDDSGRRFIV-SFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLEL-------TGNGSLGLVLDHPRNRLLVV 114 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~-~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~gi~vd~~~g~l~v~ 114 (332)
.+..|..+++ +|+.+++ +..++.|..++.........+. ......+. ...++.+++++|+...||++
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~ 172 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPAS---DVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLAD 172 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCS---EEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccc---eeEEccCCCCCccccCCCcceEEEECCCCCEEEEE
Confidence 3457778888 6665544 4667888888875433110011 11111110 01245789999973348888
Q ss_pred EeCcCCCccceEEEEECCC--C----c-EEE-----EEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC-C
Q 020019 115 AADVFGNKYSAVAAYDLST--W----N-RLF-----LTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK-G 180 (332)
Q Consensus 115 ~~~~~~~~~~~l~~~d~~~--g----~-~~~-----~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~-g 180 (332)
+.. ...+.+|+.+. + + +.. ...+. ....|++++++|||+ +|+++...+.|..++.+ |
T Consensus 173 ~~~-----~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 173 DLG-----TDQIHKFNINPNANADNKEKFLTKGTPEAFKVA----PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp ETT-----TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC----TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred eCC-----CCEEEEEEEcCCCCcccccceeecccccceecC----CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 753 34677776553 2 2 221 22221 235788999999996 89999888988888864 4
Q ss_pred ceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCC-CCeEEEEeC--CCCCCccceeEEEEecCCCCCCCCeEE
Q 020019 181 EFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTF-SGNLFKIDI--VDGVGEGEEIKLIRVAGGPLSFGDGLE 256 (332)
Q Consensus 181 ~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~-~~~i~~id~--~~~~~~~~~~~~v~~~g~~~~~pdGi~ 256 (332)
+........... ....++.+|+++||| .||+++.. .++|..++. .+++. ..+..+.. ...|.+++
T Consensus 244 ~~~~~~~~~~~~-----~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~--~~~~~~~~----g~~~~~~~ 312 (361)
T 3scy_A 244 MLDEIQTVAADT-----VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL--TKVGYQLT----GIHPRNFI 312 (361)
T ss_dssp EEEEEEEEESCS-----SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE--EEEEEEEC----SSCCCEEE
T ss_pred ceEEeEEEecCC-----CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE--EEeeEecC----CCCCceEE
Confidence 432221111111 123457899999999 89999988 777766555 44521 12222222 25689999
Q ss_pred EeCCCe-EEEEeCC-c-eEE--EEcCCCceEEEEEeeecCCCcccceEEEEE
Q 020019 257 LLSPTK-LVVAGNP-S-ARL--VESSDGWETAAVVAKFSGPVHRLATAATVK 303 (332)
Q Consensus 257 ~~~dG~-l~va~~~-~-~~~--v~~~dg~~~~~~~~~~~~~~~~~pt~va~~ 303 (332)
+++||+ ||+++.. . ..+ +...+| +...+...+. ...|+|++|.
T Consensus 313 ~spdg~~l~~~~~~~~~v~v~~~d~~~g-~~~~~~~~~~---~~~p~~v~~~ 360 (361)
T 3scy_A 313 ITPNGKYLLVACRDTNVIQIFERDQATG-LLTDIKKDIK---VDKPVCLKFV 360 (361)
T ss_dssp ECTTSCEEEEEETTTTEEEEEEECTTTC-CEEECSCCEE---CSSEEEEEEE
T ss_pred ECCCCCEEEEEECCCCCEEEEEEECCCC-cEeecceeee---CCCCeEEEEc
Confidence 999987 7887633 2 222 223445 3322222222 3468888773
No 96
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.41 E-value=3e-10 Score=102.43 Aligned_cols=225 Identities=15% Similarity=0.088 Sum_probs=140.9
Q ss_pred cccceEEcCCCCEE-EEEecCCeEEEEECCCCCCCccceeeeEEecccC--cCCCccceEEEeCCCCeEEEEEeCcC--C
Q 020019 46 FRECAKWDDSGRRF-IVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLE--LTGNGSLGLVLDHPRNRLLVVAADVF--G 120 (332)
Q Consensus 46 ~pegia~d~~g~~~-~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~gi~vd~~~g~l~v~~~~~~--~ 120 (332)
.|.+++++++|+.+ ++....++|++++..+++. .. .+. .+. ..+..+.+++++++..+||++..... .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~----~~--~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 107 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET----LG--RID-LSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL 107 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE----EE--EEE-CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECS
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe----Ee--eEE-cCCcccccccccceEECCCCCEEEEEeccccccc
Confidence 58999999999755 4556678999999887652 11 221 111 00125789999997447888862100 0
Q ss_pred C----ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC-CceEEEecCCCCCCc
Q 020019 121 N----KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPK 194 (332)
Q Consensus 121 ~----~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p 194 (332)
. ..+.|.+||.++++....+.. ...+++++++|+|+ +|++ .+.|+.++.. ++....+.....
T Consensus 108 ~~~~~~~~~i~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~--- 175 (337)
T 1pby_B 108 THFEVQPTRVALYDAETLSRRKAFEA------PRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQSW--- 175 (337)
T ss_dssp SCEEECCCEEEEEETTTTEEEEEEEC------CSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTTT---
T ss_pred ccccccCceEEEEECCCCcEEEEEeC------CCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeecccc---
Confidence 0 125799999998887655543 24578899999986 8888 4789999976 444433322111
Q ss_pred ccccCccccCeEEEccCc-eEEEEeCCCC-----------------------eEEEEeCCCCCCccceeEEEEecCCCCC
Q 020019 195 EWYKNLVGLNGIVYHPDG-FLIVIHTFSG-----------------------NLFKIDIVDGVGEGEEIKLIRVAGGPLS 250 (332)
Q Consensus 195 ~~~~~~~~~nGi~~~~dG-~Lyva~~~~~-----------------------~i~~id~~~~~~~~~~~~~v~~~g~~~~ 250 (332)
+..++++||| .||++....+ +|+.+++.+++ ...+... ....
T Consensus 176 --------~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-----~~~~~~~-~~~~ 241 (337)
T 1pby_B 176 --------EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE-----MAMREVR-IMDV 241 (337)
T ss_dssp --------TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC-----EEEEEEE-ECSS
T ss_pred --------CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC-----ceEeecC-CCCC
Confidence 1233678888 7777665544 46888888763 2233332 1224
Q ss_pred CCCeEEEeCCCe-EEEEeCCceEEEEcCCCceEEEEEeeecCCCcccceEEEE-E-CCeEEEE
Q 020019 251 FGDGLELLSPTK-LVVAGNPSARLVESSDGWETAAVVAKFSGPVHRLATAATV-K-DGRVYLN 310 (332)
Q Consensus 251 ~pdGi~~~~dG~-l~va~~~~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~-~g~lyv~ 310 (332)
.|.++++++||+ +|++ +....++...++ ++...+..+ ..|.++++ . +++||++
T Consensus 242 ~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~----~~~~~~~~~--~~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 242 FYFSTAVNPAKTRAFGA-YNVLESFDLEKN----ASIKRVPLP--HSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp CEEEEEECTTSSEEEEE-ESEEEEEETTTT----EEEEEEECS--SCCCEEEECTTSCEEEEE
T ss_pred ceeeEEECCCCCEEEEe-CCeEEEEECCCC----cCcceecCC--CceeeEEECCCCCEEEEE
Confidence 678899999976 6666 444454555555 333333322 35788888 4 4567775
No 97
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.41 E-value=2e-10 Score=112.68 Aligned_cols=231 Identities=17% Similarity=0.099 Sum_probs=149.9
Q ss_pred EEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEE
Q 020019 51 KWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYD 130 (332)
Q Consensus 51 a~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d 130 (332)
++++++.+|++...++.|..+|..+++. .. ++. .+..+.+++++++..+||+++.+ +.|.+||
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~----~~--~i~-----~g~~~~~v~~spdg~~l~v~~~d------~~V~v~D 206 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKI----VK--VID-----TGYAVHISRMSASGRYLLVIGRD------ARIDMID 206 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCE----EE--EEE-----CSTTEEEEEECTTSCEEEEEETT------SEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceE----EE--EEe-----cCcccceEEECCCCCEEEEECCC------CeEEEEE
Confidence 4888888787777789999999887762 22 221 12247899999985578888753 5799999
Q ss_pred C--CCCcEEEEEecCCCCCCCCCccceEECC----CCc-EEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcc-cccCcc
Q 020019 131 L--STWNRLFLTQLSGPSDGKSCADDVTVDA----EGN-AYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKE-WYKNLV 201 (332)
Q Consensus 131 ~--~~g~~~~~~~l~~~~~~~~~~ndiavd~----dG~-lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~-~~~~~~ 201 (332)
+ ++++....+.. ...|..++++| ||+ +|+++...+.|..+|.. ++....+......... ......
T Consensus 207 ~~~~t~~~~~~i~~------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~ 280 (543)
T 1nir_A 207 LWAKEPTKVAEIKI------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEP 280 (543)
T ss_dssp TTSSSCEEEEEEEC------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCC
T ss_pred CcCCCCcEEEEEec------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCC
Confidence 9 77776654442 35688999999 986 89998888999999865 4544433221100000 000012
Q ss_pred ccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeCC--ceEEEEcC
Q 020019 202 GLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGNP--SARLVESS 277 (332)
Q Consensus 202 ~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~~--~~~~v~~~ 277 (332)
.+.+|++++++ .+|++...+++|+.++..+.+. ..+..+... ..|.+++++++|+ +|++++. ...++...
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~--l~~~~i~~~----~~~~~~~~spdg~~l~va~~~~~~v~v~D~~ 354 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN--LTVTSIGAA----PFLHDGGWDSSHRYFMTAANNSNKVAVIDSK 354 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSS--CEEEEEECC----SSCCCEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCc--ceeEEeccC----cCccCceECCCCCEEEEEecCCCeEEEEECC
Confidence 46789999988 9999999999999999987531 122234321 4688999999998 6777643 34555666
Q ss_pred CCceEEEEEeeecCCCcccc-eEEEE---ECCeEEEEEecC
Q 020019 278 DGWETAAVVAKFSGPVHRLA-TAATV---KDGRVYLNHMLG 314 (332)
Q Consensus 278 dg~~~~~~~~~~~~~~~~~p-t~va~---~~g~lyv~~~~g 314 (332)
++ ++...+.......| .+..+ +++++|+++..+
T Consensus 355 tg----~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~ 391 (543)
T 1nir_A 355 DR----RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG 391 (543)
T ss_dssp TT----EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS
T ss_pred CC----eEEEeeccCCCCCCCCCcccCCCCCccEEEeccCC
Confidence 67 33333332111111 12222 348888876643
No 98
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.40 E-value=5.7e-10 Score=104.37 Aligned_cols=232 Identities=10% Similarity=-0.016 Sum_probs=126.2
Q ss_pred CCccccceEEcCCCCEEEEE-e---------cCCeEEEEECCCCCCCccceeeeEEecc--cCc-CCCccceEEEeCCCC
Q 020019 43 SSFFRECAKWDDSGRRFIVS-F---------LDGGIGQVAVPDDYPPGTVLEEVTLVKD--LEL-TGNGSLGLVLDHPRN 109 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~-~---------~~g~I~~vd~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~gi~vd~~~g 109 (332)
.+..| ++++++||+.+|+. . .++.|.++|+.+.+. .. ++.-. +.. .+..|.+++++|+..
T Consensus 65 ~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~----~~--~i~~~~~~~~~~g~~p~~~~~spDG~ 137 (373)
T 2mad_H 65 GGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP----IA--DIELPDAPRFDVGPYSWMNANTPNNA 137 (373)
T ss_pred CCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE----EE--EEECCCccccccCCCccceEECCCCC
Confidence 45678 99999999866655 2 246799999876552 22 12111 110 124688999999866
Q ss_pred eEEEEEeCcCCCccceEEEEECCCCcEEEE-EecCCCCCCCCCccc----eEECCCCc----------------------
Q 020019 110 RLLVVAADVFGNKYSAVAAYDLSTWNRLFL-TQLSGPSDGKSCADD----VTVDAEGN---------------------- 162 (332)
Q Consensus 110 ~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~-~~l~~~~~~~~~~nd----iavd~dG~---------------------- 162 (332)
+||+++.. ..+.|.++| +++++... +.+++. ....+.+ ++..++|.
T Consensus 138 ~l~v~n~~----~~~~v~viD-~t~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~ 210 (373)
T 2mad_H 138 DLLFFQFA----AGPAVGLVV-QGGSSDDQLLSSPTC--YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTA 210 (373)
T ss_pred EEEEEecC----CCCeEEEEE-CCCCEEeEEcCCCce--EEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccC
Confidence 78988742 135689999 99988766 544210 0000100 11222222
Q ss_pred ----------------EEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCe---EEEccCc-eEEEEeC---
Q 020019 163 ----------------AYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNG---IVYHPDG-FLIVIHT--- 219 (332)
Q Consensus 163 ----------------lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nG---i~~~~dG-~Lyva~~--- 219 (332)
+|+.. ..+.|+.+|..+....+...-.............|.| +++++|| +|||+..
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~ 289 (373)
T 2mad_H 211 AQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQS 289 (373)
T ss_pred CcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCC
Confidence 22221 2234444444321111100000000000011123555 8999999 9999865
Q ss_pred ------CCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe--EEEEeCC--ceEEEEcCCCceEEEEEeee
Q 020019 220 ------FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK--LVVAGNP--SARLVESSDGWETAAVVAKF 289 (332)
Q Consensus 220 ------~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~--l~va~~~--~~~~v~~~dg~~~~~~~~~~ 289 (332)
.++.|+.||+.+. +.+..+.++ ..|.+|++++||+ +|+++.. ...++...++ ++++.+
T Consensus 290 ~~~~~~~~~~V~VID~~t~----~vv~~i~~g----~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~----~vv~~i 357 (373)
T 2mad_H 290 AWKLHAAAKEVTSVTGLVG----QTSSQISLG----HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG----DQDQST 357 (373)
T ss_pred cccccCCCCeEEEEECCCC----EEEEEEECC----CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC----CEEeee
Confidence 2468999999987 356767654 3699999999987 5555522 2333455555 444442
Q ss_pred cCCCcccceEEEE
Q 020019 290 SGPVHRLATAATV 302 (332)
Q Consensus 290 ~~~~~~~pt~va~ 302 (332)
. +....|..+..
T Consensus 358 ~-~vG~~P~~~~~ 369 (373)
T 2mad_H 358 V-ELGSGPQVLSV 369 (373)
T ss_pred c-CCCCCCcEEEE
Confidence 1 11245666654
No 99
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.38 E-value=7.9e-10 Score=102.39 Aligned_cols=209 Identities=18% Similarity=0.258 Sum_probs=141.8
Q ss_pred CEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcE
Q 020019 57 RRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNR 136 (332)
Q Consensus 57 ~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~ 136 (332)
.+|++...++.|..++..+++. . ..+.. +..+.+++++++...+|++... .+.|.+||+++++.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~----~---~~~~~----~~~~~~~~~s~dg~~l~~~~~~-----d~~i~v~d~~~~~~ 66 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV----T---ATIPV----GSNPMGAVISPDGTKVYVANAH-----SNDVSIIDTATNNV 66 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE----E---EEEEC----SSSEEEEEECTTSSEEEEEEGG-----GTEEEEEETTTTEE
T ss_pred EEEEEcCCCCEEEEEECCCCeE----E---EEeec----CCCcceEEECCCCCEEEEECCC-----CCeEEEEECCCCeE
Confidence 3555667789999999887652 1 12211 1257899999974456677642 45799999999888
Q ss_pred EEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccCeEEEccCc-e
Q 020019 137 LFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-F 213 (332)
Q Consensus 137 ~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~ 213 (332)
...+.. ...+++++++|+|+ +|++....+.|+.+|.. ++....+.. ...+.++++++|| .
T Consensus 67 ~~~~~~------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-----------~~~~~~~~~s~dg~~ 129 (391)
T 1l0q_A 67 IATVPA------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-----------GKSPLGLALSPDGKK 129 (391)
T ss_dssp EEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-----------SSSEEEEEECTTSSE
T ss_pred EEEEEC------CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-----------CCCcceEEECCCCCE
Confidence 766554 13788999999986 88998888999999987 444333321 1246799999999 8
Q ss_pred EEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeCC--ceEEEEcCCCceEEEEEeeec
Q 020019 214 LIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGNP--SARLVESSDGWETAAVVAKFS 290 (332)
Q Consensus 214 Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~~--~~~~v~~~dg~~~~~~~~~~~ 290 (332)
||++....++|+.+++.++ +.+..+... ..|.++++.++|+ ||++... ...+.....+ + ....+.
T Consensus 130 l~~~~~~~~~v~~~d~~~~----~~~~~~~~~----~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-~---~~~~~~ 197 (391)
T 1l0q_A 130 LYVTNNGDKTVSVINTVTK----AVINTVSVG----RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN-S---VIDTVK 197 (391)
T ss_dssp EEEEETTTTEEEEEETTTT----EEEEEEECC----SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-E---EEEEEE
T ss_pred EEEEeCCCCEEEEEECCCC----cEEEEEecC----CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-e---EEEEEe
Confidence 9999999999999999876 234444332 4578999999975 6677533 3444455555 2 222222
Q ss_pred CCCcccceEEEE--ECCeEEEEEe
Q 020019 291 GPVHRLATAATV--KDGRVYLNHM 312 (332)
Q Consensus 291 ~~~~~~pt~va~--~~g~lyv~~~ 312 (332)
. ...+.++++ .+..||+++.
T Consensus 198 ~--~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 198 V--EAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp C--SSEEEEEEECTTSSEEEEEEE
T ss_pred c--CCCccceEECCCCCEEEEEec
Confidence 2 235677888 3456777653
No 100
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.38 E-value=6.6e-11 Score=110.02 Aligned_cols=209 Identities=8% Similarity=-0.007 Sum_probs=129.8
Q ss_pred cccceEEcCC----CCEEEEEec---C----CeEEEEECCCCCCCccceeeeEEec-ccCcCCCccceEEEeCCCCeEEE
Q 020019 46 FRECAKWDDS----GRRFIVSFL---D----GGIGQVAVPDDYPPGTVLEEVTLVK-DLELTGNGSLGLVLDHPRNRLLV 113 (332)
Q Consensus 46 ~pegia~d~~----g~~~~~~~~---~----g~I~~vd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gi~vd~~~g~l~v 113 (332)
.|.||+++++ +.+|++... . ++|++++.++.... +.+...++. .|......+.+|+++++ |+||+
T Consensus 74 g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~--~~~~~~l~~~~~~~~~h~~~~l~~~pD-G~Lyv 150 (354)
T 3a9g_A 74 GLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFK--LKEVKTLIDGIPGAYIHNGGRIRFGPD-GMLYI 150 (354)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCC--EEEEEEEEEEEECCSSCCCCCEEECTT-SCEEE
T ss_pred ceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcC--cCccEEEEEcCCCCCCcCCceEEECCC-CcEEE
Confidence 6899999997 677766542 3 68999997754210 111112222 12211125789999997 99999
Q ss_pred EEeCcCC--------CccceEEEEECCCCcE--------EEEEecCCCCCCCCCccceEECC-CCcEEEEeCCCC---eE
Q 020019 114 VAADVFG--------NKYSAVAAYDLSTWNR--------LFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGS---KI 173 (332)
Q Consensus 114 ~~~~~~~--------~~~~~l~~~d~~~g~~--------~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~---~I 173 (332)
+..+... ...++|++++++. +. ...+. .+..+|+++++|+ +|+||++|...+ .|
T Consensus 151 t~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~p~~npf~~~~i~a-----~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei 224 (354)
T 3a9g_A 151 TTGDAADPRLAQDLSSLAGKILRVDEEG-RPPADNPFPNSPIWS-----YGHRNPQGIDWHRASGVMVATEHGPVGHDEV 224 (354)
T ss_dssp ECCCTTCGGGGTCTTCCSSEEEEECTTS-CCCTTSSSTTCCEEE-----ECCSCCCEEEECTTTCCEEEEECCSSSCCEE
T ss_pred EECCCCCCccccCCCCCCeEEEEEcCCC-CCCCCCCCCCCcEEE-----EccCCcceEEEeCCCCCEEEEecCCCCCcEE
Confidence 9764221 1235788998763 21 00111 1246799999999 699999998765 36
Q ss_pred EEEcCCCceE---EEe--cCCCCCCcccc--cCccccCeEEE-------ccCceEEEEeCCCCeEEEEeCCCCCCcccee
Q 020019 174 WKVGVKGEFL---SII--SSPLFTPKEWY--KNLVGLNGIVY-------HPDGFLIVIHTFSGNLFKIDIVDGVGEGEEI 239 (332)
Q Consensus 174 ~~v~~~g~~~---~~~--~~~~~~~p~~~--~~~~~~nGi~~-------~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~ 239 (332)
.++.+.+-.- ... ..+.+..|... .....|.|+++ +.+|.||+++...++|++++++... +..
T Consensus 225 ~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g---~~~ 301 (354)
T 3a9g_A 225 NIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNM---EVR 301 (354)
T ss_dssp EEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGG---CEE
T ss_pred EEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCC---ccc
Confidence 6665432110 000 00112222211 12456899999 4678999999999999999998431 121
Q ss_pred --EEEEecCCCCCCCCeEEEeCCCeEEEEeC
Q 020019 240 --KLIRVAGGPLSFGDGLELLSPTKLVVAGN 268 (332)
Q Consensus 240 --~~v~~~g~~~~~pdGi~~~~dG~l~va~~ 268 (332)
+.+ +.+ ....|.+|++++||.|||++.
T Consensus 302 ~~~~~-~~~-~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 302 KISTF-FKN-VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEE-CTT-TSCCEEEEEECTTSCEEEEEC
T ss_pred ceeee-ccC-CCCCeeEEEECCCCcEEEEEe
Confidence 222 221 346799999999999999974
No 101
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.38 E-value=6.9e-10 Score=103.80 Aligned_cols=246 Identities=14% Similarity=0.049 Sum_probs=135.8
Q ss_pred EEcCCCCEEEEE-e-cCC---eEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCC----C
Q 020019 51 KWDDSGRRFIVS-F-LDG---GIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG----N 121 (332)
Q Consensus 51 a~d~~g~~~~~~-~-~~g---~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~----~ 121 (332)
...++++..|+. . ..+ .|+++|+.+++. .. .+ .. +..| +|+++++..+||+++..... .
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~----~~---~i-~~---g~~p-~i~~spDg~~lyv~n~~~~~~~rg~ 94 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSI----LG---HV-NG---GFLP-NPVAAHSGSEFALASTSFSRIAKGK 94 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeE----EE---Ee-cC---CCCC-CeEECCCCCEEEEEeccccccccCC
Confidence 334666655544 4 444 889999887652 11 22 12 2367 99999986689999742110 0
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCC--CCCCccceEECCCCc-EEEEeCC-CCeEEEEcCC-CceEEE-ecCCCCC--C
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSD--GKSCADDVTVDAEGN-AYVTDVT-GSKIWKVGVK-GEFLSI-ISSPLFT--P 193 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~--~~~~~ndiavd~dG~-lyvtd~~-~~~I~~v~~~-g~~~~~-~~~~~~~--~ 193 (332)
..+.+.+||.+++++...+.+.++.. ....|.+++++|||+ ||+++.. .+.|..+| + ++.... +..+... .
T Consensus 95 ~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~ 173 (373)
T 2mad_H 95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIH 173 (373)
T ss_pred CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEE
Confidence 13468899999988887777631111 125688999999985 9999875 68899999 6 454433 3221100 0
Q ss_pred ccc-------------------------c---cCcccc----CeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeE
Q 020019 194 KEW-------------------------Y---KNLVGL----NGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIK 240 (332)
Q Consensus 194 p~~-------------------------~---~~~~~~----nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~ 240 (332)
|.. . +...+. ....+.+++ .+|+.. ..++++.+|..+... ..+.
T Consensus 174 ~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~--~v~~ 250 (373)
T 2mad_H 174 PGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGA--TNKA 250 (373)
T ss_pred eCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcc--eEee
Confidence 000 0 000000 011223333 433333 345666676654311 1122
Q ss_pred EEEecC----CCCCCCCe---EEEeCC-CeEEEEeCC-----------ceEEEEcCCCceEEEEEeeecCCCcccceEEE
Q 020019 241 LIRVAG----GPLSFGDG---LELLSP-TKLVVAGNP-----------SARLVESSDGWETAAVVAKFSGPVHRLATAAT 301 (332)
Q Consensus 241 ~v~~~g----~~~~~pdG---i~~~~d-G~l~va~~~-----------~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va 301 (332)
.+.... .....|+| +++++| ++|||+..+ ...++....+ ++++.+..+ ..|.+++
T Consensus 251 ~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~----~vv~~i~~g--~~p~~i~ 324 (373)
T 2mad_H 251 PIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG----QTSSQISLG--HDVDAIS 324 (373)
T ss_pred eeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC----EEEEEEECC--CCcCeEE
Confidence 222210 01124777 889988 669998531 2344444444 566665533 3589999
Q ss_pred E-EC-C-eEEEEEecCcccc
Q 020019 302 V-KD-G-RVYLNHMLGFGYP 318 (332)
Q Consensus 302 ~-~~-g-~lyv~~~~g~~~~ 318 (332)
+ .+ + .+|+++.....++
T Consensus 325 ~s~Dg~~~l~v~~~~~~~V~ 344 (373)
T 2mad_H 325 VAQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred ECCCCCeEEEEEcCCCCeEE
Confidence 9 44 4 5777776666654
No 102
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.38 E-value=4.3e-11 Score=111.74 Aligned_cols=228 Identities=10% Similarity=-0.035 Sum_probs=129.2
Q ss_pred CCccccceEEcCCCCEEEEE-e---------cCCeEEEEECCCCCCCccceeeeEEeccc---Cc-CCCccceEEEeCCC
Q 020019 43 SSFFRECAKWDDSGRRFIVS-F---------LDGGIGQVAVPDDYPPGTVLEEVTLVKDL---EL-TGNGSLGLVLDHPR 108 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~-~---------~~g~I~~vd~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~gi~vd~~~ 108 (332)
.+..| ++++++||+.+|+. . .++.|.++|+.+.+ +.. ++. -+ .+ .+..|.+++++++.
T Consensus 64 vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~----vv~--~I~-v~~~~~~~~g~~P~~ia~SpDG 135 (368)
T 1mda_H 64 GAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL----PIA--DIE-LPDAPRFSVGPRVHIIGNCASS 135 (368)
T ss_dssp ECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC----EEE--EEE-ETTSCSCCBSCCTTSEEECTTS
T ss_pred CCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC----EEE--EEE-CCCccccccCCCcceEEEcCCC
Confidence 35678 99999999755544 2 25679999998876 222 222 12 11 12468999999986
Q ss_pred CeEEEEEeCcCCCccceEEE--EECCCCcEEEEEecCCCCCCCCCccc----e---------------------------
Q 020019 109 NRLLVVAADVFGNKYSAVAA--YDLSTWNRLFLTQLSGPSDGKSCADD----V--------------------------- 155 (332)
Q Consensus 109 g~l~v~~~~~~~~~~~~l~~--~d~~~g~~~~~~~l~~~~~~~~~~nd----i--------------------------- 155 (332)
.+|||++.. ..+.+.+ +|+++ ...+.+++. -...|.+ +
T Consensus 136 k~lyVan~~----~~~~v~V~~iD~~t---v~~i~v~~~--~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~ 206 (368)
T 1mda_H 136 ACLLFFLFG----SSAAAGLSVPGASD---DQLTKSASC--FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQC 206 (368)
T ss_dssp SCEEEEECS----SSCEEEEEETTTEE---EEEEECSSC--CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCS
T ss_pred CEEEEEccC----CCCeEEEEEEchhh---ceEEECCCc--eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEe
Confidence 689999753 1234666 67755 222333110 0000100 1
Q ss_pred -----------EECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCe---EEEccCc-eEEEEeC-
Q 020019 156 -----------TVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNG---IVYHPDG-FLIVIHT- 219 (332)
Q Consensus 156 -----------avd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nG---i~~~~dG-~Lyva~~- 219 (332)
+...++.+|++.. +.|+.+|..+....+...-.+...........|.| +++++|| +|||+..
T Consensus 207 t~~i~vg~~P~~~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~ 284 (368)
T 1mda_H 207 TGAQNCSSQAAQANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVE 284 (368)
T ss_dssp CTTSCBCSCCEEETTTTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred eeeeeCCCCccccccCCEEEEEcC--CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEecc
Confidence 1111223444433 56666665432111111100100000011223455 8999999 9999865
Q ss_pred --C-----CCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeC-Cce--EEEEcCCCceEEEEEee
Q 020019 220 --F-----SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGN-PSA--RLVESSDGWETAAVVAK 288 (332)
Q Consensus 220 --~-----~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~-~~~--~~v~~~dg~~~~~~~~~ 288 (332)
. .+.+..||+.+.+ .+..+.++ ..|.||++++||+ +|++++ ... .++...++ ++++.
T Consensus 285 ~~~~~~~~~~~~~ViD~~t~~----vv~~i~vg----~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~----kvv~~ 352 (368)
T 1mda_H 285 HSRSCLAAAENTSSVTASVGQ----TSGPISNG----HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD----QDQSS 352 (368)
T ss_dssp CSSCTTSCEEEEEEEESSSCC----EEECCEEE----EEECEEEECCSSSCEEEEEETTTTEEEEEESSSC----EEEEE
T ss_pred ccCcccccCCCEEEEECCCCe----EEEEEECC----CCcceEEECCCCCEEEEEccCCCCeEEEEECCCC----cEEEE
Confidence 3 3456799999873 56666654 3699999999987 899986 332 33445444 66676
Q ss_pred ecCCCcccceEEEEE
Q 020019 289 FSGPVHRLATAATVK 303 (332)
Q Consensus 289 ~~~~~~~~pt~va~~ 303 (332)
+.. ...|.++++.
T Consensus 353 I~v--g~~P~~i~~~ 365 (368)
T 1mda_H 353 VEL--DKGPESLSVQ 365 (368)
T ss_dssp CCC--CSCCCEEECC
T ss_pred EEC--CCCCCEEEee
Confidence 653 4678888873
No 103
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.37 E-value=5.7e-10 Score=104.83 Aligned_cols=225 Identities=15% Similarity=0.104 Sum_probs=149.9
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcC--CCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELT--GNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
..|.+++++++++++++...++.|..++..+++. . ......... ...+.+++++++ +++|++...
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~----~---~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~----- 189 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQT----V---RLSPPEKYKKKLGFVETISIPEH-NELWVSQMQ----- 189 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCE----E---EECCCHHHHTTCCEEEEEEEGGG-TEEEEEEGG-----
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeE----e---eecCcccccccCCceeEEEEcCC-CEEEEEECC-----
Confidence 3567899999776666666678899999887752 1 121111111 124678999885 898888753
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNL 200 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~ 200 (332)
.+.+.+||.++++....... ....++.++++++|+ +|++.+..+.|+.+|.. ++....+.. .
T Consensus 190 d~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-----------~ 253 (433)
T 3bws_A 190 ANAVHVFDLKTLAYKATVDL-----TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-----------I 253 (433)
T ss_dssp GTEEEEEETTTCCEEEEEEC-----SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-----------C
T ss_pred CCEEEEEECCCceEEEEEcC-----CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-----------C
Confidence 46799999998887655442 135788999999986 77898888999999976 444332211 1
Q ss_pred cccCeEEEccCc-eEEEEeC-------CCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCC-eEEEEeCC--
Q 020019 201 VGLNGIVYHPDG-FLIVIHT-------FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPT-KLVVAGNP-- 269 (332)
Q Consensus 201 ~~~nGi~~~~dG-~Lyva~~-------~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG-~l~va~~~-- 269 (332)
..+.+++++|+| .||++.. ..+.|+.+++.+++ .+..+... ..+.+++++++| .+|++...
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~----~~~~~~~~----~~~~~~~~~~~g~~l~~~~~~~~ 325 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK----LIDTIGPP----GNKRHIVSGNTENKIYVSDMCCS 325 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE----EEEEEEEE----ECEEEEEECSSTTEEEEEETTTT
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc----EEeeccCC----CCcceEEECCCCCEEEEEecCCC
Confidence 247899999999 8888875 45688999998762 34434332 356789999998 58888533
Q ss_pred ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-EC-CeEEEEEe
Q 020019 270 SARLVESSDGWETAAVVAKFSGPVHRLATAATV-KD-GRVYLNHM 312 (332)
Q Consensus 270 ~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~-g~lyv~~~ 312 (332)
...+....++ + +...+.. ...|.++++ .+ ..||++..
T Consensus 326 ~v~v~d~~~~-~---~~~~~~~--~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 326 KIEVYDLKEK-K---VQKSIPV--FDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp EEEEEETTTT-E---EEEEEEC--SSSEEEEEECTTSSEEEEEEC
T ss_pred EEEEEECCCC-c---EEEEecC--CCCCCeEEEcCCCCEEEEEec
Confidence 3344444555 3 3333321 244678888 44 45777554
No 104
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.37 E-value=1.4e-10 Score=108.54 Aligned_cols=230 Identities=12% Similarity=0.069 Sum_probs=133.6
Q ss_pred CccccceEEcCCCCEEEE-Ee---------cCCeEEEEECCCCCCCccceeeeEEecccC---cCCCccceEEEeCCCCe
Q 020019 44 SFFRECAKWDDSGRRFIV-SF---------LDGGIGQVAVPDDYPPGTVLEEVTLVKDLE---LTGNGSLGLVLDHPRNR 110 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~-~~---------~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~gi~vd~~~g~ 110 (332)
+..|+ +++++||+.+|+ +. .++.|.+||..+.+ +.. ++.-.++ ..+..|.+++++++..+
T Consensus 78 G~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~----v~~--~I~v~~g~r~~~g~~P~~~a~spDGk~ 150 (386)
T 3sjl_D 78 GFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL----PTA--DIELPDAPRFLVGTYPWMTSLTPDGKT 150 (386)
T ss_dssp CSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC----EEE--EEEETTCCCCCBSCCGGGEEECTTSSE
T ss_pred CCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe----EEE--EEECCCccccccCCCCceEEEcCCCCE
Confidence 56786 999999986554 42 24679999998776 223 2221110 11347999999998667
Q ss_pred EEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccc----eEECCCCcEEEEeCC-----------------
Q 020019 111 LLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADD----VTVDAEGNAYVTDVT----------------- 169 (332)
Q Consensus 111 l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~nd----iavd~dG~lyvtd~~----------------- 169 (332)
|||++.. ..+.|.++|.+++++...+.+++. ...+|.+ +++.+||.+++.+..
T Consensus 151 lyVan~~----~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~ 224 (386)
T 3sjl_D 151 LLFYQFS----PAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPED 224 (386)
T ss_dssp EEEEECS----SSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTT
T ss_pred EEEEEcC----CCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccc
Confidence 9998742 135688899998888776665321 0112222 244444443222221
Q ss_pred ---------------------CCeEEEEcCCCceEEEecC-CCCCC----cccccCccccCeEEEccCc-eEEEEeC---
Q 020019 170 ---------------------GSKIWKVGVKGEFLSIISS-PLFTP----KEWYKNLVGLNGIVYHPDG-FLIVIHT--- 219 (332)
Q Consensus 170 ---------------------~~~I~~v~~~g~~~~~~~~-~~~~~----p~~~~~~~~~nGi~~~~dG-~Lyva~~--- 219 (332)
.+.|+.+|..+....+... ..+.. +.+. ..+...+++++++ +|||+..
T Consensus 225 ~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~--p~g~q~~a~~~~~~~lyV~~~~~~ 302 (386)
T 3sjl_D 225 EFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWR--PGGWQQVAYHRALDRIYLLVDQRD 302 (386)
T ss_dssp SCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEE--ECSSSCEEEETTTTEEEEEEEECC
T ss_pred ccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccccccc--CCCcceeeECCCCCeEEEEecccc
Confidence 2344444433221111000 00100 0000 1123458889998 9999864
Q ss_pred ------CCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe--EEEEeCC--ceEEEEcCCCceEEEEEeee
Q 020019 220 ------FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK--LVVAGNP--SARLVESSDGWETAAVVAKF 289 (332)
Q Consensus 220 ------~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~--l~va~~~--~~~~v~~~dg~~~~~~~~~~ 289 (332)
..++|+.||+.+.+ .+..+.+. ..|.+|++++||+ ||+++.. ...++...++ ++++.+
T Consensus 303 ~~~hk~~~~~V~viD~~t~k----v~~~i~vg----~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~----k~~~~i 370 (386)
T 3sjl_D 303 EWRHKTASRFVVVLDAKTGE----RLAKFEMG----HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG----EELRSV 370 (386)
T ss_dssp TTCTTSCEEEEEEEETTTCC----EEEEEEEE----EEECEEEECSSSSCEEEEEETTTTEEEEEETTTC----CEEEEE
T ss_pred ccccCCCCCEEEEEECCCCe----EEEEEECC----CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC----cEEEEe
Confidence 24689999999883 67777765 3688999999985 7777743 2344455666 566655
Q ss_pred cCCCcccceEEEE
Q 020019 290 SGPVHRLATAATV 302 (332)
Q Consensus 290 ~~~~~~~pt~va~ 302 (332)
.. ...|..+++
T Consensus 371 ~~--~~~p~~l~~ 381 (386)
T 3sjl_D 371 NQ--LGHGPQVIT 381 (386)
T ss_dssp CC--CCSSCCEEE
T ss_pred cC--CCCCceeEE
Confidence 43 334666665
No 105
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.36 E-value=5.2e-10 Score=101.48 Aligned_cols=160 Identities=16% Similarity=0.162 Sum_probs=105.9
Q ss_pred cceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEE
Q 020019 48 ECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVA 127 (332)
Q Consensus 48 egia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~ 127 (332)
-|+++.+++++|++...+++|+++|..+++. .. .+..+.. ..+.+++++++...+|++... .+.|.
T Consensus 3 ~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~----~~---~~~~~~~--~~~~~~~~s~dg~~~~v~~~~-----~~~i~ 68 (349)
T 1jmx_B 3 TGPALKAGHEYMIVTNYPNNLHVVDVASDTV----YK---SCVMPDK--FGPGTAMMAPDNRTAYVLNNH-----YGDIY 68 (349)
T ss_dssp -CCCCCTTCEEEEEEETTTEEEEEETTTTEE----EE---EEECSSC--CSSCEEEECTTSSEEEEEETT-----TTEEE
T ss_pred ccccccCCCEEEEEeCCCCeEEEEECCCCcE----EE---EEecCCC--CCCceeEECCCCCEEEEEeCC-----CCcEE
Confidence 4678888888888887789999999887652 11 2211111 157899999973457887642 45799
Q ss_pred EEECCCCcEEEEEecCCCC-CCCCCccceEECCCCc-EEEEeCC-----------CCeEEEEcCCC-ceEEEecCCCCCC
Q 020019 128 AYDLSTWNRLFLTQLSGPS-DGKSCADDVTVDAEGN-AYVTDVT-----------GSKIWKVGVKG-EFLSIISSPLFTP 193 (332)
Q Consensus 128 ~~d~~~g~~~~~~~l~~~~-~~~~~~ndiavd~dG~-lyvtd~~-----------~~~I~~v~~~g-~~~~~~~~~~~~~ 193 (332)
+||+++++....+.+.... .....+++++++|||+ +|++... .+.|+.+|... +...... .+.
T Consensus 69 ~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~- 145 (349)
T 1jmx_B 69 GIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR--TFP- 145 (349)
T ss_dssp EEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE--EEE-
T ss_pred EEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceee--ecc-
Confidence 9999998877666652100 0023488999999996 7887743 57898888653 2211100 010
Q ss_pred cccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCC
Q 020019 194 KEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 194 p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
....+.++++++||.||++ ++.|+.+++.++
T Consensus 146 -----~~~~~~~~~~s~dg~l~~~---~~~i~~~d~~~~ 176 (349)
T 1jmx_B 146 -----MPRQVYLMRAADDGSLYVA---GPDIYKMDVKTG 176 (349)
T ss_dssp -----CCSSCCCEEECTTSCEEEE---SSSEEEECTTTC
T ss_pred -----CCCcccceeECCCCcEEEc---cCcEEEEeCCCC
Confidence 1124678999999998885 345999998866
No 106
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.36 E-value=4.6e-11 Score=114.70 Aligned_cols=168 Identities=14% Similarity=0.189 Sum_probs=110.0
Q ss_pred CCc-cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCc-----CCCccceEEEeCC---CCeEEE
Q 020019 43 SSF-FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLEL-----TGNGSLGLVLDHP---RNRLLV 113 (332)
Q Consensus 43 ~~~-~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~gi~vd~~---~g~l~v 113 (332)
.++ .|.+++++++|++|++....++|++++..+++. + .+..-++. ...+++||+++|+ ++.||+
T Consensus 24 ~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~-----~--~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv 96 (454)
T 1cru_A 24 SNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSV-----K--TVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI 96 (454)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-----E--EEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred CCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE-----e--EEecCCccccccCCCCceeEEEECCCcCcCCEEEE
Confidence 344 999999999999999887667899998765542 2 22211211 1247889999995 699999
Q ss_pred EEeCcC----C---CccceEEEEECCCC--cE---EEEE-ecCCCCCCCCCccceEECCCCcEEEEeC------------
Q 020019 114 VAADVF----G---NKYSAVAAYDLSTW--NR---LFLT-QLSGPSDGKSCADDVTVDAEGNAYVTDV------------ 168 (332)
Q Consensus 114 ~~~~~~----~---~~~~~l~~~d~~~g--~~---~~~~-~l~~~~~~~~~~ndiavd~dG~lyvtd~------------ 168 (332)
+..... . ....+|.+|+.+.+ ++ ...+ .++ ....+++++|++++||+|||+..
T Consensus 97 ~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p--~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~ 174 (454)
T 1cru_A 97 SGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLP--SSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFL 174 (454)
T ss_dssp EEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEEC--CCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTS
T ss_pred EEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCC--CCCCCCCCeEeECCCCeEEEEECCCCCCCcccccc
Confidence 985310 0 01357888876432 22 1122 242 22357899999999999999832
Q ss_pred --------------------CCCeEEEEcCCCceEEEecCCCCC----CcccccCccccCeEEEccCceEEEEeCCCC
Q 020019 169 --------------------TGSKIWKVGVKGEFLSIISSPLFT----PKEWYKNLVGLNGIVYHPDGFLIVIHTFSG 222 (332)
Q Consensus 169 --------------------~~~~I~~v~~~g~~~~~~~~~~~~----~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~ 222 (332)
..++|+|++++|+.. ..++ |. ...+..++.+|.|++|+++|+||+++...+
T Consensus 175 ~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip--~~Np-f~~~~~~ei~a~G~RNp~gla~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 175 PNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIP--KDNP-SFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSEQGPN 249 (454)
T ss_dssp CCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCC--TTCC-EETTEECSEEEBCCSEEEEEEECTTSCEEEEEECSS
T ss_pred ccccccccccccccccCCCCCCeeEEEEeCCCCCC--CCCC-CCCCCcceEEEECCCCcceEEECCCCCEEEEecCCC
Confidence 147899999998731 0010 10 011123456799999999999999998643
No 107
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.35 E-value=1.5e-09 Score=106.97 Aligned_cols=238 Identities=13% Similarity=0.103 Sum_probs=152.3
Q ss_pred CCccccceEEcCCCCEEEEEecCCeEEEEECC--CCCCCccceeeeEEecccCcCCCccceEEEe----CCCCeEEEEEe
Q 020019 43 SSFFRECAKWDDSGRRFIVSFLDGGIGQVAVP--DDYPPGTVLEEVTLVKDLELTGNGSLGLVLD----HPRNRLLVVAA 116 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd----~~~g~l~v~~~ 116 (332)
.+..|+++++++||+.+|+...++.|.++|.. +.+ +.. ++. .+..|.+|+++ ++...+|+++.
T Consensus 195 ~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~----~v~--~i~-----~G~~P~~ia~s~~~~pDGk~l~v~n~ 263 (567)
T 1qks_A 195 TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT----TVA--EIK-----IGSEARSIETSKMEGWEDKYAIAGAY 263 (567)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC----EEE--EEE-----CCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc----EeE--EEe-----cCCCCceeEEccccCCCCCEEEEEEc
Confidence 35578999999999977766567899999985 333 111 221 23478999999 56457888876
Q ss_pred CcCCCccceEEEEECCCCcEEEEEecCCC-CCC-----CCCccceEECCCC-cEEEEeCCCCeEEEEcCCC-ceEEEecC
Q 020019 117 DVFGNKYSAVAAYDLSTWNRLFLTQLSGP-SDG-----KSCADDVTVDAEG-NAYVTDVTGSKIWKVGVKG-EFLSIISS 188 (332)
Q Consensus 117 ~~~~~~~~~l~~~d~~~g~~~~~~~l~~~-~~~-----~~~~ndiavd~dG-~lyvtd~~~~~I~~v~~~g-~~~~~~~~ 188 (332)
. .+.+.+||..+.++...+.+.+. .++ ..+...+...+++ .+|++....|.|+.+|... +......-
T Consensus 264 ~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i 338 (567)
T 1qks_A 264 W-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI 338 (567)
T ss_dssp E-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE
T ss_pred c-----CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee
Confidence 3 35688999999998877765321 111 1245577887776 4677777889999999653 22211110
Q ss_pred CCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCC-CeEEE-eCC-CeEE
Q 020019 189 PLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFG-DGLEL-LSP-TKLV 264 (332)
Q Consensus 189 ~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~p-dGi~~-~~d-G~l~ 264 (332)
+ ....+.++.|++|| ++|+++..+++|..||+.+++ .+..+.+.+ ..+.| .|+.+ +++ |.+|
T Consensus 339 ~---------~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k----l~~~i~vgg-~~Phpg~g~~~~~p~~g~v~ 404 (567)
T 1qks_A 339 S---------AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK----LVAIEDTGG-QTPHPGRGANFVHPTFGPVW 404 (567)
T ss_dssp E---------CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE----EEEEEECSS-SSBCCTTCEEEEETTTEEEE
T ss_pred e---------ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc----EEEEEeccC-cCCCCccceeeECCCCCcEE
Confidence 0 11246689999999 999999999999999999873 455566511 22334 36654 776 8899
Q ss_pred EEeC-C-ceEEEEcCCC-------ceEEEEEeeecCCCcccceEEEE--ECCeEEEEEecC
Q 020019 265 VAGN-P-SARLVESSDG-------WETAAVVAKFSGPVHRLATAATV--KDGRVYLNHMLG 314 (332)
Q Consensus 265 va~~-~-~~~~v~~~dg-------~~~~~~~~~~~~~~~~~pt~va~--~~g~lyv~~~~g 314 (332)
++.+ . ....++..+. |+. +..+.... ..+-.+.. ++.+|||+++++
T Consensus 405 ~t~~~g~~~Vsvid~~~~~~~~~~~kv---v~~i~~~g-~g~~~i~~~p~~~~l~v~~~~~ 461 (567)
T 1qks_A 405 ATSHMGDDSVALIGTDPEGHPDNAWKI---LDSFPALG-GGSLFIKTHPNSQYLYVDATLN 461 (567)
T ss_dssp EEEBSSSSEEEEEECCTTTCTTTBTSE---EEEEECSC-SCCCCEECCTTCSEEEEECTTC
T ss_pred EeCCCCCCeEEEecCCCCCCccccCEE---EEEEecCC-CCCEEEEeCCCCCeEEEecCCC
Confidence 8863 2 2233333332 543 33333221 12233444 457899988754
No 108
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.32 E-value=4.6e-10 Score=103.97 Aligned_cols=248 Identities=13% Similarity=0.041 Sum_probs=139.9
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECC-CCCCCccceeeeEEecccCcCCCccceEEEeCCCCe-EEEEEeCcC----
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVP-DDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR-LLVVAADVF---- 119 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~-l~v~~~~~~---- 119 (332)
.|..++++++|+.+|+.... .|..++.+ +++. . .....+. . ..|.+++++++ |+ ||+...+.+
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~-----~--~~~~~~~-~-g~~~~~~~spd-g~~l~~~~~~~~~~~~ 109 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEI-----V--HEASHPI-G-GHPRANDADTN-TRAIFLLAAKQPPYAV 109 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEE-----E--EEEEEEC-C-SSGGGGCTTSC-CEEEEEEECSSTTCCE
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCE-----E--EeeEeec-C-CCCccEEECCC-CCEEEEEEecCCccee
Confidence 78899999999966655333 78777764 4541 1 1211111 1 14677899997 76 344322100
Q ss_pred -CC----ccceEEEEECC-CCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC--CceEEEecCCC
Q 020019 120 -GN----KYSAVAAYDLS-TWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK--GEFLSIISSPL 190 (332)
Q Consensus 120 -~~----~~~~l~~~d~~-~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~--g~~~~~~~~~~ 190 (332)
.+ ..+.+.+|+.+ .|+........ +.+....+++++++|||+ +|+++...+.|+.++.+ |+....... .
T Consensus 110 ~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~-~ 187 (365)
T 1jof_A 110 YANPFYKFAGYGNVFSVSETGKLEKNVQNY-EYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSV-D 187 (365)
T ss_dssp EEEEESSSCCEEEEEEECTTCCEEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEE-E
T ss_pred ccceeecCCceEEEEccCCCCcCcceEeeE-EeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeE-e
Confidence 00 12456778876 46654333321 011246789999999996 89999888899888864 654322110 0
Q ss_pred CCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeC--CCCCCccceeEEEE-ecCCCC---C-------CCCeEE
Q 020019 191 FTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDI--VDGVGEGEEIKLIR-VAGGPL---S-------FGDGLE 256 (332)
Q Consensus 191 ~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~--~~~~~~~~~~~~v~-~~g~~~---~-------~pdGi~ 256 (332)
+.. ...+|.+++|+||| .||+++..+++|..++. .+++... ..+.+. .+ ... . .|.+++
T Consensus 188 ~~~-----~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~-~~~~~~~~~-~~~~g~~~~~~~~~~~~~i~ 260 (365)
T 1jof_A 188 APD-----PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVY-THHSFPLIP-PGIPDRDPETGKGLYRADVC 260 (365)
T ss_dssp CSS-----TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE-EEEEEESSC-TTCCCBCTTTSSBSEEEEEE
T ss_pred cCC-----CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEE-ccceEEcCC-CCcCCcccccccccccccEE
Confidence 000 12468899999999 99999988887766544 3452100 012233 22 111 1 478999
Q ss_pred -EeCCCe-EEEEeC--C-----ceEEEEc-CCCceEEEEEeeecCCCcccceEEEE-E----CCeEEEEEecCc
Q 020019 257 -LLSPTK-LVVAGN--P-----SARLVES-SDGWETAAVVAKFSGPVHRLATAATV-K----DGRVYLNHMLGF 315 (332)
Q Consensus 257 -~~~dG~-l~va~~--~-----~~~~v~~-~dg~~~~~~~~~~~~~~~~~pt~va~-~----~g~lyv~~~~g~ 315 (332)
+++||+ ||+++. . ...+... .+| +...+...+... ...|..+++ . ++.||+++..+.
T Consensus 261 ~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g-~~~~~~~~~~~~-~~~~~~~a~sp~~~dg~~l~v~~~~~~ 332 (365)
T 1jof_A 261 ALTFSGKYMFASSRANKFELQGYIAGFKLRDCG-SIEKQLFLSPTP-TSGGHSNAVSPCPWSDEWMAITDDQEG 332 (365)
T ss_dssp EECTTSSEEEEEEEESSTTSCCEEEEEEECTTS-CEEEEEEEEECS-SCCTTCCCEEECTTCTTEEEEECSSSC
T ss_pred EECCCCCEEEEECCCCCCCCCCeEEEEEECCCC-CEEEeeeeeecC-CCCcccceecCCCcCCCEEEEEEcCCC
Confidence 999986 777762 2 3333333 356 333322222211 234566666 4 567777665433
No 109
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.30 E-value=2e-10 Score=112.15 Aligned_cols=255 Identities=13% Similarity=0.096 Sum_probs=151.6
Q ss_pred CCCEEEEE-ecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEE-e-CCCCeEEEEEeCcC------C-----
Q 020019 55 SGRRFIVS-FLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVL-D-HPRNRLLVVAADVF------G----- 120 (332)
Q Consensus 55 ~g~~~~~~-~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v-d-~~~g~l~v~~~~~~------~----- 120 (332)
||+.+|++ ..+++|.+||.++.+. . ..+.-|. +.+|.|+++ . |+.+.+|++..... .
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~----~---~ii~ip~--g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~ 170 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKC----D---AILEIPN--AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV 170 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEE----E---EEEECSS--CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred CCCEEEEEcCCCCEEEEEECCCceE----e---eEEeCCC--CCCCcceeeeecCCCcEEEEecccccccCCCCcccccc
Confidence 67766655 6688999999987652 1 2232232 237899998 4 77678888753210 0
Q ss_pred -CccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCC--------------CeEEEEcC------
Q 020019 121 -NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTG--------------SKIWKVGV------ 178 (332)
Q Consensus 121 -~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~--------------~~I~~v~~------ 178 (332)
.-.+.+.++|.++.++.+.+.+. ..|.+++++++|+ +|+|+... ..|..++.
T Consensus 171 ~~~~~~vtvID~~t~~v~~qI~Vg------g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~ 244 (595)
T 1fwx_A 171 ANYVNVFTAVDADKWEVAWQVLVS------GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKA 244 (595)
T ss_dssp GGEEEEEEEEETTTTEEEEEEEES------SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHH
T ss_pred cccCceEEEEECCCCeEEEEEEeC------CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEe
Confidence 11346788999998888777662 2688999999985 88887654 23444331
Q ss_pred --CCceEE-----EecCCC--CCC-cccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCC------CCcc--cee
Q 020019 179 --KGEFLS-----IISSPL--FTP-KEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDG------VGEG--EEI 239 (332)
Q Consensus 179 --~g~~~~-----~~~~~~--~~~-p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~------~~~~--~~~ 239 (332)
+|+... +++... ... ...++....|.|+.++||| ++|+++..+++|..||.++. ++.. ..+
T Consensus 245 v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 245 IAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp HHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred ccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE
Confidence 233211 111111 000 1112334579999999999 99999999999999998843 1110 112
Q ss_pred EEEEecCCCCCCCCeEEEeCCCeEEEEeCCce--EEEEcCC------CceEEEEEeeecCCCcccc------eEEEE--E
Q 020019 240 KLIRVAGGPLSFGDGLELLSPTKLVVAGNPSA--RLVESSD------GWETAAVVAKFSGPVHRLA------TAATV--K 303 (332)
Q Consensus 240 ~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~--~~v~~~d------g~~~~~~~~~~~~~~~~~p------t~va~--~ 303 (332)
..+.+ ..+|-+++++++|++|++..-.+ .+..... |.+...++..+.. .-.| -+.++ +
T Consensus 325 ~~v~v----G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV--~yqpGh~~~~~g~t~~~D 398 (595)
T 1fwx_A 325 AEPEL----GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV--HYQPGHLKTVMGETLDAT 398 (595)
T ss_dssp ECCBC----CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC--SSCEEEEEETTTTSTTCC
T ss_pred EEcCC----CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeec--ccccccceeccceEeCCC
Confidence 22221 25799999999999999974332 2222222 1111234444432 1233 12233 5
Q ss_pred CCeEEEEEecCcc--cc-CCccceeeeeec
Q 020019 304 DGRVYLNHMLGFG--YP-KKKHALVEAVFS 330 (332)
Q Consensus 304 ~g~lyv~~~~g~~--~~-~~~~~~~~~~~~ 330 (332)
+++||+.|++..+ ++ -.-+|..+.+|+
T Consensus 399 Gk~l~~~Nk~skdr~~~~gp~~~~~~ql~d 428 (595)
T 1fwx_A 399 NDWLVCLSKFSKDRFLNVGPLKPENDQLID 428 (595)
T ss_dssp SSEEEEEESCCTTSSCCCCSSCCEEEEEEE
T ss_pred CCEEEEcCCCCccccccCCCCCCCcceEEE
Confidence 7899999998743 22 233355556554
No 110
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.30 E-value=2.6e-10 Score=103.84 Aligned_cols=203 Identities=12% Similarity=0.090 Sum_probs=124.5
Q ss_pred ccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCC---CCCCCCccceEE---CCCCcEEE-EeC--
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGP---SDGKSCADDVTV---DAEGNAYV-TDV-- 168 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~---~~~~~~~ndiav---d~dG~lyv-td~-- 168 (332)
-|.+++.|+.++++|+++.. .+.|.+||+..+..+.. .+++. +.+...+.|+.+ |++|+||+ ++.
T Consensus 14 yPE~~~wd~~~g~~~vs~l~-----~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLY-----KGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp CCSCEEEETTTTEEEEEETT-----TTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred CCcCccCcCCCCEEEEEecc-----CCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 57899999988999999864 46799999986665443 44321 222346789999 79999998 552
Q ss_pred ----------CCCeEEEEcCC----CceEEEecCCCCC-C--cccccCccccCeEEEccCceEEEEeCCC-CeEEEEeCC
Q 020019 169 ----------TGSKIWKVGVK----GEFLSIISSPLFT-P--KEWYKNLVGLNGIVYHPDGFLIVIHTFS-GNLFKIDIV 230 (332)
Q Consensus 169 ----------~~~~I~~v~~~----g~~~~~~~~~~~~-~--p~~~~~~~~~nGi~~~~dG~Lyva~~~~-~~i~~id~~ 230 (332)
+...|.++|.+ |+.....+..... . +.......++|+|++|++|+.||+++.. +.|+||+++
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 35789999987 6654433211000 0 0000012468999999999999999999 999999999
Q ss_pred CCCCccceeEEEEec---CCCCCCCCeEEEeCCCeE-EEEeCCc-eEEEEcCCCceEEEEEee--ecCCCcccceEE-EE
Q 020019 231 DGVGEGEEIKLIRVA---GGPLSFGDGLELLSPTKL-VVAGNPS-ARLVESSDGWETAAVVAK--FSGPVHRLATAA-TV 302 (332)
Q Consensus 231 ~~~~~~~~~~~v~~~---g~~~~~pdGi~~~~dG~l-~va~~~~-~~~v~~~dg~~~~~~~~~--~~~~~~~~pt~v-a~ 302 (332)
.. .+..+... .....++.||++.|+|++ ++++... ...+..... ...++... .....+..|+.+ +.
T Consensus 168 G~-----~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p-v~~~v~~~~~G~~~~~~~~dgilp~ 241 (334)
T 2p9w_A 168 GK-----TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP-YAWPEPVKINGDFGTLSGTEKIVTV 241 (334)
T ss_dssp SC-----CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS-SCCCEECEESSCCCCCTTEEEEEEE
T ss_pred CC-----EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC-cceeecccccCCcccccCccccccc
Confidence 54 23222221 112346899999999864 4444432 222222211 10011111 001236678885 55
Q ss_pred -ECCeE-EEEEe
Q 020019 303 -KDGRV-YLNHM 312 (332)
Q Consensus 303 -~~g~l-yv~~~ 312 (332)
.+|++ +|++.
T Consensus 242 ~~~G~vllV~~~ 253 (334)
T 2p9w_A 242 PVGNESVLVGAR 253 (334)
T ss_dssp EETTEEEEEEEE
T ss_pred ccCCEEEEEEcC
Confidence 57777 77654
No 111
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.29 E-value=3.6e-10 Score=104.74 Aligned_cols=193 Identities=13% Similarity=0.110 Sum_probs=124.1
Q ss_pred ccceEEEeCCCCeEEEEEeC-cC------CCccceEEEEECCC--CcEEEEEecCC--CCCCCCCccceEECC--CC--c
Q 020019 98 GSLGLVLDHPRNRLLVVAAD-VF------GNKYSAVAAYDLST--WNRLFLTQLSG--PSDGKSCADDVTVDA--EG--N 162 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~-~~------~~~~~~l~~~d~~~--g~~~~~~~l~~--~~~~~~~~ndiavd~--dG--~ 162 (332)
+|..|+++++ |.+|++... .+ +...++|++||+++ ++.. ...+.+ +......|+||.+.+ +| +
T Consensus 51 G~EDi~~~~~-G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~-~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILPN-GLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVS-ELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECTT-SEEEEEECCC-----------CCEEEEEETTSSSCCEE-ECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CcceeEEcCC-CeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceE-EEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 6778999985 999999731 10 01356899999973 3433 233332 111236899999965 45 5
Q ss_pred EEEEeCCCC----eEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeC-----------------CC
Q 020019 163 AYVTDVTGS----KIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHT-----------------FS 221 (332)
Q Consensus 163 lyvtd~~~~----~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~-----------------~~ 221 (332)
|||.+...+ .|++++++++...++..-.. ..+..||.++++++|.+|+++. ..
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g------~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~ 202 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH------KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAW 202 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECC------TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCC
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEecccc------CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCc
Confidence 899987632 48889988776555432111 1346799999999999999976 35
Q ss_pred CeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCC-eEEEEeCC--ceEEEE-cCCCceEEEEEeeecCCCcccc
Q 020019 222 GNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPT-KLVVAGNP--SARLVE-SSDGWETAAVVAKFSGPVHRLA 297 (332)
Q Consensus 222 ~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG-~l~va~~~--~~~~v~-~~dg~~~~~~~~~~~~~~~~~p 297 (332)
++|||+++. .++.+. . .+..|.||++++|| .|||++.. .++... .++| +... .+.+.. ...|
T Consensus 203 g~vyr~d~~-------~~~~~~-~--~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g-~l~~-~~~~~~--~g~P 268 (355)
T 3sre_A 203 SFVTYYSPN-------DVRVVA-E--GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW-TLTP-LRVLSF--DTLV 268 (355)
T ss_dssp EEEEEECTT-------CCEEEE-E--EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS-CEEE-EEEEEC--SSEE
T ss_pred cEEEEEECC-------eEEEee-c--CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCC-cEec-CEEEeC--CCCC
Confidence 789999874 122232 2 45789999999997 69999843 333333 2455 3322 222322 2569
Q ss_pred eEEEE-E-CCeEEEEEe
Q 020019 298 TAATV-K-DGRVYLNHM 312 (332)
Q Consensus 298 t~va~-~-~g~lyv~~~ 312 (332)
.++++ . +|+|||+..
T Consensus 269 DGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 269 DNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEECTTTCCEEEEEE
T ss_pred ceEEEeCCCCcEEEEec
Confidence 99999 5 499999553
No 112
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.29 E-value=1.1e-09 Score=99.42 Aligned_cols=209 Identities=11% Similarity=0.062 Sum_probs=127.1
Q ss_pred cccceEEcCCCCEE-EEEecCCeEEEEECCCCCCCccceeeeEEecccCcC---CCccceEEEeCCCCeEEEEEeCc--C
Q 020019 46 FRECAKWDDSGRRF-IVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELT---GNGSLGLVLDHPRNRLLVVAADV--F 119 (332)
Q Consensus 46 ~pegia~d~~g~~~-~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~gi~vd~~~g~l~v~~~~~--~ 119 (332)
.|.+++++++|+.+ ++...++.|++++..+++. .. .+..+... +..+.+++++++...||++..+. .
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~----~~---~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 116 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN----TF---HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRL 116 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EE---EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE----EE---EEEcccccccccccccceEECCCCCEEEEEccccccc
Confidence 68899999999855 4556678999999887652 11 22111110 22478999999744677776320 0
Q ss_pred C----CccceEEEEECCCCcEEEEE-ecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCC
Q 020019 120 G----NKYSAVAAYDLSTWNRLFLT-QLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTP 193 (332)
Q Consensus 120 ~----~~~~~l~~~d~~~g~~~~~~-~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~ 193 (332)
. ...+.|.+||+++++..... .+.. ...+.+++++++|++|+++ +.|+.+|.. ++....+.......
T Consensus 117 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~s~dg~l~~~~---~~i~~~d~~~~~~~~~~~~~~~~~ 189 (349)
T 1jmx_B 117 NDHYVVKPPRLEVFSTADGLEAKPVRTFPM----PRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALPLRNWNR 189 (349)
T ss_dssp SSCEEECCCEEEEEEGGGGGGBCCSEEEEC----CSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEEEECSTTCCC
T ss_pred ccccccCCCeEEEEECCCccccceeeeccC----CCcccceeECCCCcEEEcc---CcEEEEeCCCCceeccccccccCC
Confidence 0 01257899999875532211 1111 1357789999999988863 349999975 55443332111000
Q ss_pred ccc-------------------c---------------------------------------cCccccCeEEEcc-Cc-e
Q 020019 194 KEW-------------------Y---------------------------------------KNLVGLNGIVYHP-DG-F 213 (332)
Q Consensus 194 p~~-------------------~---------------------------------------~~~~~~nGi~~~~-dG-~ 213 (332)
+.. . +....+.+++++| || .
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~ 269 (349)
T 1jmx_B 190 KGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ 269 (349)
T ss_dssp TTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTE
T ss_pred ccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCE
Confidence 000 0 0011456788889 99 8
Q ss_pred EEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeCC-ceEEEEcCCC
Q 020019 214 LIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGNP-SARLVESSDG 279 (332)
Q Consensus 214 Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~~-~~~~v~~~dg 279 (332)
||++ .++|+.+|+.++ +.+..+... ..|.+++++++|+ ||++... ...+.....+
T Consensus 270 l~~~---~~~v~~~d~~~~----~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 270 IYGV---LNRLAKYDLKQR----KLIKAANLD----HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EEEE---ESEEEEEETTTT----EEEEEEECS----SCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred EEEE---cCeEEEEECccC----eEEEEEcCC----CCccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 9988 679999999877 244545433 3578999999965 7776433 3344455555
No 113
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.28 E-value=7e-10 Score=105.02 Aligned_cols=209 Identities=17% Similarity=0.102 Sum_probs=135.3
Q ss_pred cccceEEcCCCCEEEEEecC------CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 46 FRECAKWDDSGRRFIVSFLD------GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~------g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
.|+++...++| +|++.+.+ |.|..+|..+.+ +.. +|.. +.....-+..+.+.++.+.+|+++.+.+
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~----v~~--~~~~-~~~~~~~~Yd~~~~p~~~~mvsS~wg~p 210 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE----PLG--KWEI-DRGDQYLAYDFWWNLPNEVLVSSEWAVP 210 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC----EEE--ECCS-BCTTCCCCCCEEEETTTTEEEECBCCCH
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe----EEE--EEcc-CCCCccccceEEECCCCCEEEEccCcCc
Confidence 89999999999 88766554 789999988776 223 3431 1111113456888997555555542110
Q ss_pred --------C-----CccceEEEEECCCCcEEEEEecCCCCCCCCCccceEE--CCCCc-EEEEeC-----CCCeEEEEcC
Q 020019 120 --------G-----NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTV--DAEGN-AYVTDV-----TGSKIWKVGV 178 (332)
Q Consensus 120 --------~-----~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiav--d~dG~-lyvtd~-----~~~~I~~v~~ 178 (332)
. ....+|.+||.++++....+.+. .....|..+++ +|+|+ +|++.. ..+.|+++..
T Consensus 211 ~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg---~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 211 NTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG---EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp HHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC---TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred cccccccchhhhhhccCCEEEEEECCCCcEeeEEecC---CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 0 02468999999988888777772 11356788877 99986 899988 8888876554
Q ss_pred C-CceE--EEecCCCC----CCccccc---C-ccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCC-CCccceeEEEEec
Q 020019 179 K-GEFL--SIISSPLF----TPKEWYK---N-LVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDG-VGEGEEIKLIRVA 245 (332)
Q Consensus 179 ~-g~~~--~~~~~~~~----~~p~~~~---~-~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~-~~~~~~~~~v~~~ 245 (332)
+ |+.. ..+.-+.. ..|.... . ...+.+|.+++|| .|||++...+.|..++.... +. +.+..+...
T Consensus 288 d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~--~lv~~I~tG 365 (462)
T 2ece_A 288 EDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKP--VLTGKVKLG 365 (462)
T ss_dssp ETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSC--EEEEEEECB
T ss_pred cCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCc--EEEEEEEeC
Confidence 3 4321 22211110 0010000 0 2458999999999 99999999999999997632 21 345666655
Q ss_pred CC----------CC-CCCCeEEEeCCCe-EEEEe
Q 020019 246 GG----------PL-SFGDGLELLSPTK-LVVAG 267 (332)
Q Consensus 246 g~----------~~-~~pdGi~~~~dG~-l~va~ 267 (332)
|. .+ ..|.++++++||+ |||++
T Consensus 366 G~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 366 GIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 31 11 3699999999975 88888
No 114
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.27 E-value=1.8e-09 Score=101.09 Aligned_cols=246 Identities=12% Similarity=0.049 Sum_probs=139.7
Q ss_pred EEcCCCCEEEEE-ec----CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCC----C
Q 020019 51 KWDDSGRRFIVS-FL----DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG----N 121 (332)
Q Consensus 51 a~d~~g~~~~~~-~~----~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~----~ 121 (332)
...|+++.+|+. .. .++|+++|..+.+ +.. ++. .|..|. |+++|+..+||+++..... .
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~----v~~--~I~-----vG~~P~-va~spDG~~lyVan~~~~r~~~G~ 106 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGR----VIG--MID-----GGFLPN-PVVADDGSFIAHASTVFSRIARGE 106 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTE----EEE--EEE-----ECSSCE-EEECTTSSCEEEEEEEEEETTEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCe----EEE--EEE-----CCCCCc-EEECCCCCEEEEEcccccccccCC
Confidence 345777765554 54 6799999988765 222 221 123574 9999986679999741100 0
Q ss_pred ccceEEEEECCCCcEEEEEecCCCC--CCCCCccceEECCCCc-EEEEeCC-CCeEEEEcCC-CceEEEecCCCCC----
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPS--DGKSCADDVTVDAEGN-AYVTDVT-GSKIWKVGVK-GEFLSIISSPLFT---- 192 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~--~~~~~~ndiavd~dG~-lyvtd~~-~~~I~~v~~~-g~~~~~~~~~~~~---- 192 (332)
..+.|.+||.+++++...+.++... .....|.+++++|||+ +||++.. .+.|..+|.. ++....+..+...
T Consensus 107 ~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P 186 (386)
T 3sjl_D 107 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFP 186 (386)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeec
Confidence 1356899999999988877773200 0125799999999996 9999864 6888888876 3333222111000
Q ss_pred --------------------Cc-cc----ccCcc------ccCeEEEc-cCce-EEEEeCCCCeEEEEeCCCCCCcccee
Q 020019 193 --------------------PK-EW----YKNLV------GLNGIVYH-PDGF-LIVIHTFSGNLFKIDIVDGVGEGEEI 239 (332)
Q Consensus 193 --------------------~p-~~----~~~~~------~~nGi~~~-~dG~-Lyva~~~~~~i~~id~~~~~~~~~~~ 239 (332)
.+ .. ..... ..+..+|+ ++|+ +|++. +++|+.+|..+++. +..
T Consensus 187 ~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~--~v~ 262 (386)
T 3sjl_D 187 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY--TGKIHQIDLSSGDA--KFL 262 (386)
T ss_dssp EETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT--TSEEEEEECTTSSC--EEC
T ss_pred CCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC--CCEEEEEECCCCcc--eee
Confidence 00 00 00000 01123443 5674 45443 56788888765521 112
Q ss_pred EEEEecCC----CCCCCCe---EEEeCC-CeEEEEeC-----------CceEEEEcCCCceEEEEEeeecCCCcccceEE
Q 020019 240 KLIRVAGG----PLSFGDG---LELLSP-TKLVVAGN-----------PSARLVESSDGWETAAVVAKFSGPVHRLATAA 300 (332)
Q Consensus 240 ~~v~~~g~----~~~~pdG---i~~~~d-G~l~va~~-----------~~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~v 300 (332)
..+.+-.. .--.|.| ++++++ +++||+.+ +..+++....+ ++++.+..+ ..|.++
T Consensus 263 ~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~----kv~~~i~vg--~~~~~l 336 (386)
T 3sjl_D 263 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG----ERLAKFEMG--HEIDSI 336 (386)
T ss_dssp CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC----CEEEEEEEE--EEECEE
T ss_pred cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCC----eEEEEEECC--CCcceE
Confidence 22221000 0012333 888876 78999863 12344555555 455554432 346789
Q ss_pred EE-ECC--eEEEEEecCcccc
Q 020019 301 TV-KDG--RVYLNHMLGFGYP 318 (332)
Q Consensus 301 a~-~~g--~lyv~~~~g~~~~ 318 (332)
++ .++ +||++++.+.+++
T Consensus 337 avs~D~~~~ly~tn~~~~~Vs 357 (386)
T 3sjl_D 337 NVSQDEKPLLYALSTGDKTLY 357 (386)
T ss_dssp EECSSSSCEEEEEETTTTEEE
T ss_pred EECCCCCeEEEEEcCCCCeEE
Confidence 99 454 6888888776654
No 115
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.26 E-value=3.8e-10 Score=104.75 Aligned_cols=209 Identities=10% Similarity=-0.001 Sum_probs=126.5
Q ss_pred cccceEEcCC----CCEEEEEec-------CCeEEEEECCCCCCCccceeeeEEec-ccCc--CCCccceEEEeCCCCeE
Q 020019 46 FRECAKWDDS----GRRFIVSFL-------DGGIGQVAVPDDYPPGTVLEEVTLVK-DLEL--TGNGSLGLVLDHPRNRL 111 (332)
Q Consensus 46 ~pegia~d~~----g~~~~~~~~-------~g~I~~vd~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~gi~vd~~~g~l 111 (332)
.|.+++++|+ +.+|++... ..+|++++.+..... +.+...++. .|.. ....+.+|+++++ |.|
T Consensus 67 g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~--~~~~~~i~~~~p~~~~~~h~~~~l~~~pd-G~L 143 (353)
T 2g8s_A 67 GLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSK--VTDFRTVFRQMPKLSTGNHFGGRLVFDGK-GYL 143 (353)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSB--EEEEEEEEECSSCCBSSSCCCCCEEECSS-SEE
T ss_pred CceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCC--CCceEEEEEECCCCCCCcccCccEEECCC-CcE
Confidence 5678999994 777776532 347999887543210 111112322 2321 1124789999997 999
Q ss_pred EEEEeCcCC--------CccceEEEEECCCCcE-------------EEEEecCCCCCCCCCccceEECC-CCcEEEEeCC
Q 020019 112 LVVAADVFG--------NKYSAVAAYDLSTWNR-------------LFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVT 169 (332)
Q Consensus 112 ~v~~~~~~~--------~~~~~l~~~d~~~g~~-------------~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~ 169 (332)
|++..+... ...++|+++|++. +. ...+.. +...|.++++|+ +|+||++|.+
T Consensus 144 yv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG-~~p~~npf~~~~~~~~~i~a~-----G~rnp~gl~~d~~~g~l~~~d~g 217 (353)
T 2g8s_A 144 FIALGENNQRPTAQDLDKLQGKLVRLTDQG-EIPDDNPFIKESGVRAEIWSY-----GIRNPQGMAMNPWSNALWLNEHG 217 (353)
T ss_dssp EEEECCTTCGGGGGCTTSCTTEEEEEETTS-CCCTTCTTTTSTTSCTTEEEE-----CCSEEEEEEEETTTTEEEEEEEC
T ss_pred EEEECCCCCCCccCCCCCCCeEEEEECCCC-CCCCCCCCcCCCCCCccEEEE-----cCcCccceEEECCCCCEEEEecC
Confidence 999865321 1235799999863 21 000111 235699999999 6999999986
Q ss_pred CC---eEEEEcCCCceE---EEe----c-----------CCCCCCccc-ccCccccCeEEEcc-------CceEEEEeCC
Q 020019 170 GS---KIWKVGVKGEFL---SII----S-----------SPLFTPKEW-YKNLVGLNGIVYHP-------DGFLIVIHTF 220 (332)
Q Consensus 170 ~~---~I~~v~~~g~~~---~~~----~-----------~~~~~~p~~-~~~~~~~nGi~~~~-------dG~Lyva~~~ 220 (332)
.. .|.++.+.+..- ... . .+.+..|.. ......|.|+++.. +|.+|+++..
T Consensus 218 ~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~ 297 (353)
T 2g8s_A 218 PRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALK 297 (353)
T ss_dssp SBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETT
T ss_pred CCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEcc
Confidence 43 566665432210 000 0 001112221 11234689999974 5799999999
Q ss_pred CCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 221 SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 221 ~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
.++|++++++.++ .+....+-......|.+|++++||.|||++
T Consensus 298 ~~~v~~~~~~~~~----~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 298 DKDVIVMSVNGDK----VTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp TTEEEEEEEETTE----EEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred CCEEEEEEeCCCe----EeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 9999999998542 222222210123589999999999999984
No 116
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.24 E-value=6.2e-09 Score=102.58 Aligned_cols=236 Identities=17% Similarity=0.048 Sum_probs=146.8
Q ss_pred cccceEEcCC-CC-EEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 46 FRECAKWDDS-GR-RFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 46 ~pegia~d~~-g~-~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
.|..+.+..| ++ +|++...+++|..+|..+++. .. ++. .+..|.+++++++...+|+++. .
T Consensus 155 ~P~~~~~~~d~~~~~~V~~~~~~~V~viD~~t~~v----~~--~i~-----~g~~p~~v~~SpDGr~lyv~~~------d 217 (567)
T 1qks_A 155 RPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEI----KT--VLD-----TGYAVHISRLSASGRYLFVIGR------D 217 (567)
T ss_dssp SCSSCCSCCCGGGEEEEEETTTTEEEEEETTTCCE----EE--EEE-----CSSCEEEEEECTTSCEEEEEET------T
T ss_pred cccccccccCCCceEEEEeCCCCeEEEEECCCCeE----EE--EEe-----CCCCccceEECCCCCEEEEEcC------C
Confidence 4555554444 33 444557789999999987762 22 221 1236789999998556888764 3
Q ss_pred ceEEEEECC--CCcEEEEEecCCCCCCCCCccceEEC----CCCc-EEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcc
Q 020019 124 SAVAAYDLS--TWNRLFLTQLSGPSDGKSCADDVTVD----AEGN-AYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKE 195 (332)
Q Consensus 124 ~~l~~~d~~--~g~~~~~~~l~~~~~~~~~~ndiavd----~dG~-lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~ 195 (332)
+.|.+||+. +++....+.. ...|.+++++ |||+ +|+++...+.|..+|.. .+....+.........
T Consensus 218 g~V~viD~~~~t~~~v~~i~~------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~ 291 (567)
T 1qks_A 218 GKVNMIDLWMKEPTTVAEIKI------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE 291 (567)
T ss_dssp SEEEEEETTSSSCCEEEEEEC------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTT
T ss_pred CeEEEEECCCCCCcEeEEEec------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccc
Confidence 579999995 7776655443 3568899999 6985 99999999999999965 3443332211110000
Q ss_pred -cccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeCCc--
Q 020019 196 -WYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGNPS-- 270 (332)
Q Consensus 196 -~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~~~-- 270 (332)
.........+|..++++ .+|++...+++|+.++..+.+. ..+..+... ..|.++.++++|+ +|++++.+
T Consensus 292 ~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~--~~v~~i~~~----~~~~d~~~~pdgr~~~va~~~sn~ 365 (567)
T 1qks_A 292 QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN--LKTTEISAE----RFLHDGGLDGSHRYFITAANARNK 365 (567)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE--EEEEEEECC----SSEEEEEECTTSCEEEEEEGGGTE
T ss_pred ccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc--ceeeeeecc----ccccCceECCCCCEEEEEeCCCCe
Confidence 00001134578899988 8899999999999999986521 123333321 4678899999988 56666533
Q ss_pred eEEEEcCCCceEEEEEeeecC-CCcccc-eEEEE--E-CCeEEEEEecC
Q 020019 271 ARLVESSDGWETAAVVAKFSG-PVHRLA-TAATV--K-DGRVYLNHMLG 314 (332)
Q Consensus 271 ~~~v~~~dg~~~~~~~~~~~~-~~~~~p-t~va~--~-~g~lyv~~~~g 314 (332)
..++...++ ++...+.. .....| .+..+ . ++.+|+++.++
T Consensus 366 V~ViD~~t~----kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g 410 (567)
T 1qks_A 366 LVVIDTKEG----KLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG 410 (567)
T ss_dssp EEEEETTTT----EEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS
T ss_pred EEEEECCCC----cEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCC
Confidence 444566666 33333332 222222 13333 2 57888877665
No 117
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.24 E-value=4.4e-09 Score=94.96 Aligned_cols=213 Identities=10% Similarity=0.112 Sum_probs=135.9
Q ss_pred eEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEE
Q 020019 50 AKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAY 129 (332)
Q Consensus 50 ia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~ 129 (332)
+++. ++++|+++ .++.|+++++. ++. .+..... ......+.++++ |++|++.. .+.|+.|
T Consensus 103 ~~~~-~~~l~v~t-~~~~l~~~d~~-g~~--------~~~~~~~--~~~~~~~~~~~~-g~l~vgt~------~~~l~~~ 162 (330)
T 3hxj_A 103 FTIF-EDILYVTS-MDGHLYAINTD-GTE--------KWRFKTK--KAIYATPIVSED-GTIYVGSN------DNYLYAI 162 (330)
T ss_dssp EEEE-TTEEEEEC-TTSEEEEECTT-SCE--------EEEEECS--SCCCSCCEECTT-SCEEEECT------TSEEEEE
T ss_pred ceEE-CCEEEEEe-cCCEEEEEcCC-CCE--------EEEEcCC--CceeeeeEEcCC-CEEEEEcC------CCEEEEE
Confidence 4444 56666544 46889999987 541 2221111 113456677875 89999864 2579999
Q ss_pred ECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEc
Q 020019 130 DLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYH 209 (332)
Q Consensus 130 d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~ 209 (332)
|.+ |+..+...+. ......+++|++|++|++. +.|++++.+|+........ ......++++
T Consensus 163 d~~-g~~~~~~~~~-----~~~~~~~~~d~~g~l~v~t---~~l~~~d~~g~~~~~~~~~----------~~~~~~~~~~ 223 (330)
T 3hxj_A 163 NPD-GTEKWRFKTN-----DAITSAASIGKDGTIYFGS---DKVYAINPDGTEKWNFYAG----------YWTVTRPAIS 223 (330)
T ss_dssp CTT-SCEEEEEECS-----SCCCSCCEECTTCCEEEES---SSEEEECTTSCEEEEECCS----------SCCCSCCEEC
T ss_pred CCC-CCEeEEEecC-----CCceeeeEEcCCCEEEEEe---CEEEEECCCCcEEEEEccC----------CcceeceEEC
Confidence 998 8877666552 2356678999999999998 8899999877754332211 1235688999
Q ss_pred cCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCceEEEEcCCCceEEEEEeee
Q 020019 210 PDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSARLVESSDGWETAAVVAKF 289 (332)
Q Consensus 210 ~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~~~v~~~dg~~~~~~~~~~ 289 (332)
++|.||++.. .+.|++++.++. ....+... ...+..+.++++|+||++..........++| +. ....
T Consensus 224 ~~g~l~v~t~-~~gl~~~~~~g~-----~~~~~~~~---~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g-~~---~~~~ 290 (330)
T 3hxj_A 224 EDGTIYVTSL-DGHLYAINPDGT-----EKWRFKTG---KRIESSPVIGNTDTIYFGSYDGHLYAINPDG-TE---KWNF 290 (330)
T ss_dssp TTSCEEEEET-TTEEEEECTTSC-----EEEEEECS---SCCCSCCEECTTSCEEEECTTCEEEEECTTS-CE---EEEE
T ss_pred CCCeEEEEcC-CCeEEEECCCCC-----EeEEeeCC---CCccccceEcCCCeEEEecCCCCEEEECCCC-cE---EEEE
Confidence 9999999875 567999976433 34434432 1234567888899999998764343455666 22 2212
Q ss_pred cCCCcccceEEEE-ECCeEEEEEecCc
Q 020019 290 SGPVHRLATAATV-KDGRVYLNHMLGF 315 (332)
Q Consensus 290 ~~~~~~~pt~va~-~~g~lyv~~~~g~ 315 (332)
..+. ....+++. .+|+||+...-|.
T Consensus 291 ~~~~-~~~~~~~~d~~g~l~~gt~~G~ 316 (330)
T 3hxj_A 291 ETGS-WIIATPVIDENGTIYFGTRNGK 316 (330)
T ss_dssp ECSS-CCCSCCEECTTCCEEEECTTSC
T ss_pred EcCC-ccccceEEcCCCEEEEEcCCCe
Confidence 2121 22345666 7899999665553
No 118
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.24 E-value=5.3e-10 Score=104.32 Aligned_cols=236 Identities=11% Similarity=-0.057 Sum_probs=137.7
Q ss_pred CCEEEEEecCC----eEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC----CCccceEE
Q 020019 56 GRRFIVSFLDG----GIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF----GNKYSAVA 127 (332)
Q Consensus 56 g~~~~~~~~~g----~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~----~~~~~~l~ 127 (332)
.++|+++...+ +|+.+|+++.+ +.. ++. .|..| |++++++..++||++.... +.+.+.|.
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~----v~~--~i~-----vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~Vs 99 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGV----TLG--HSL-----GAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVE 99 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTE----EEE--EEE-----ECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEE
T ss_pred CeEEEECCccCCccceEEEEECCCCe----EEE--EEe-----CCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 45777775555 89999988776 222 222 12367 9999998778999984211 01246799
Q ss_pred EEECCCCcEEEEEecCCCCC--CCCCccceEECCCC-cEEEEeCC-CCeEEE--EcCCCceEEEecCCCC--CCcc----
Q 020019 128 AYDLSTWNRLFLTQLSGPSD--GKSCADDVTVDAEG-NAYVTDVT-GSKIWK--VGVKGEFLSIISSPLF--TPKE---- 195 (332)
Q Consensus 128 ~~d~~~g~~~~~~~l~~~~~--~~~~~ndiavd~dG-~lyvtd~~-~~~I~~--v~~~g~~~~~~~~~~~--~~p~---- 195 (332)
+||+.++++...+.++++.. ....|.+++++||| .+||++.. .+.|.. +|+.. ..++ ..+.. ..|.
T Consensus 100 viD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-v~~i-~v~~~~~~~p~g~~~ 177 (368)
T 1mda_H 100 VFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-DQLT-KSASCFHIHPGAAAT 177 (368)
T ss_dssp EECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-EEEE-ECSSCCCCEEEETTE
T ss_pred EEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-ceEE-ECCCceEEccCCCeE
Confidence 99999999988887742110 12579999999998 59999876 567777 78743 1111 10000 0000
Q ss_pred -------------------------------cccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEE
Q 020019 196 -------------------------------WYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIR 243 (332)
Q Consensus 196 -------------------------------~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~ 243 (332)
..+....|. + .+++ .+|++.. ++++.+|..+.+. +.+..+.
T Consensus 178 ~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~--~~V~viD~~~~~~--~v~~~~~ 250 (368)
T 1mda_H 178 HYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA--SSILQGDIPAAGA--TMKAAID 250 (368)
T ss_dssp EECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS--SCCEEEECCSSCC--EEECCCC
T ss_pred EEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC--CEEEEEECCCCcc--eEEEEEE
Confidence 000001122 3 3444 6555555 7788888865311 0111121
Q ss_pred ecC----CCCCCCCe---EEEeCC-CeEEEEeC---C-------ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-EC
Q 020019 244 VAG----GPLSFGDG---LELLSP-TKLVVAGN---P-------SARLVESSDGWETAAVVAKFSGPVHRLATAATV-KD 304 (332)
Q Consensus 244 ~~g----~~~~~pdG---i~~~~d-G~l~va~~---~-------~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~ 304 (332)
+.. .....|.| +++++| +++||+.. . ...++....+ +++..++.+ ..|.++++ .+
T Consensus 251 ~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~----~vv~~i~vg--~~p~gi~~s~D 324 (368)
T 1mda_H 251 GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG----QTSGPISNG--HDSDAIIAAQD 324 (368)
T ss_dssp SSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC----CEEECCEEE--EEECEEEECCS
T ss_pred eccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC----eEEEEEECC--CCcceEEECCC
Confidence 110 01123555 889988 56999854 2 2233444444 455555432 36899999 55
Q ss_pred C-eEEEEEe-cCcccc
Q 020019 305 G-RVYLNHM-LGFGYP 318 (332)
Q Consensus 305 g-~lyv~~~-~g~~~~ 318 (332)
| ++|++++ ..+.++
T Consensus 325 g~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 325 GASDNYANSAGTEVLD 340 (368)
T ss_dssp SSCEEEEEETTTTEEE
T ss_pred CCEEEEEccCCCCeEE
Confidence 4 6999888 466665
No 119
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.23 E-value=1.1e-08 Score=95.03 Aligned_cols=111 Identities=10% Similarity=0.111 Sum_probs=75.6
Q ss_pred CEEEEEe-----cCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC----CCccceEE
Q 020019 57 RRFIVSF-----LDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF----GNKYSAVA 127 (332)
Q Consensus 57 ~~~~~~~-----~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~----~~~~~~l~ 127 (332)
.+|+++. .++.|+++|..+++. .. ++. . +..| +++++++..+||+++.... ....+.|.
T Consensus 17 ~~yv~~~~~~~~~d~~v~v~D~~t~~~----~~--~i~--~---g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~ 84 (361)
T 2oiz_A 17 RIYVMDSVFMHLTESRVHVYDYTNGKF----LG--MVP--T---AFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVE 84 (361)
T ss_dssp EEEEEECCGGGGGGCEEEEEETTTCCE----EE--EEE--C---CEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEE
T ss_pred EEEEECCCCCccccCeEEEEECCCCeE----EE--Eec--C---CCCC-ceEECCCCCEEEEEEecccccccCCCCCEEE
Confidence 3555553 357999999877752 22 221 1 2367 9999998667999874210 01234688
Q ss_pred EEECCCCcEEEEEecCCCC-CCCCCccceEECCCCc-EEEEeCC-CCeEEEEcCC
Q 020019 128 AYDLSTWNRLFLTQLSGPS-DGKSCADDVTVDAEGN-AYVTDVT-GSKIWKVGVK 179 (332)
Q Consensus 128 ~~d~~~g~~~~~~~l~~~~-~~~~~~ndiavd~dG~-lyvtd~~-~~~I~~v~~~ 179 (332)
+||.++++....+.+.... .....|.+++++|||+ +|+++.. .+.|..+|.+
T Consensus 85 v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~ 139 (361)
T 2oiz_A 85 VWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVA 139 (361)
T ss_dssp EEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETT
T ss_pred EEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECC
Confidence 9999998888777663111 1235799999999995 8999876 6889999876
No 120
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.23 E-value=3.8e-09 Score=95.08 Aligned_cols=189 Identities=7% Similarity=-0.029 Sum_probs=122.8
Q ss_pred cccceEEcCCCCEEEEEe------------cCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEE
Q 020019 46 FRECAKWDDSGRRFIVSF------------LDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLV 113 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~------------~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v 113 (332)
.|.+++++++|+.+++.. .++.|+.++..+++. . ..+.. +..+.+++++++...||+
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~----~---~~~~~----~~~~~~~~~s~dg~~l~~ 151 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR----R---KAFEA----PRQITMLAWARDGSKLYG 151 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE----E---EEEEC----CSSCCCEEECTTSSCEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE----E---EEEeC----CCCcceeEECCCCCEEEE
Confidence 688999999997655542 358999999876541 1 12211 236789999997445777
Q ss_pred EEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCC---------------------
Q 020019 114 VAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGS--------------------- 171 (332)
Q Consensus 114 ~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~--------------------- 171 (332)
++ +.+.+||.++++....+... ..+..+++.|+|. +|++....+
T Consensus 152 ~~--------~~i~~~d~~~~~~~~~~~~~------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (337)
T 1pby_B 152 LG--------RDLHVMDPEAGTLVEDKPIQ------SWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAY 217 (337)
T ss_dssp ES--------SSEEEEETTTTEEEEEECST------TTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGE
T ss_pred eC--------CeEEEEECCCCcEeeeeecc------ccCCCceeCCCccEEeeeccCCCceeeeeecccccccccccccc
Confidence 72 35889999998876554431 1122346788875 676655444
Q ss_pred --eEEEEcCCC-ceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCC
Q 020019 172 --KIWKVGVKG-EFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGG 247 (332)
Q Consensus 172 --~I~~v~~~g-~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~ 247 (332)
.|+.+|... +.. ..... +....+.+++++||| .||++ +++|+.+++.++ +.+..+...
T Consensus 218 ~~~v~~~d~~~~~~~-~~~~~--------~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~----~~~~~~~~~-- 279 (337)
T 1pby_B 218 RTGLLTMDLETGEMA-MREVR--------IMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKN----ASIKRVPLP-- 279 (337)
T ss_dssp EEEEEEEETTTCCEE-EEEEE--------ECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTT----EEEEEEECS--
T ss_pred ccceEEEeCCCCCce-EeecC--------CCCCceeeEEECCCCCEEEEe---CCeEEEEECCCC----cCcceecCC--
Confidence 357777663 332 11110 112357789999999 89988 478999999876 244445433
Q ss_pred CCCCCCeEEEeCCCe-EEEEeCC-ceEEEEcCCC
Q 020019 248 PLSFGDGLELLSPTK-LVVAGNP-SARLVESSDG 279 (332)
Q Consensus 248 ~~~~pdGi~~~~dG~-l~va~~~-~~~~v~~~dg 279 (332)
..|.++++++||+ ||++... ...++...++
T Consensus 280 --~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 280 --HSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp --SCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred --CceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 4688999999987 7777543 3344455556
No 121
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.23 E-value=4.3e-09 Score=97.36 Aligned_cols=207 Identities=12% Similarity=0.092 Sum_probs=119.7
Q ss_pred cccceEEcCCCCE-EE-EEe-------------cCCeEEEEECC-CCCCCccceeeeEEecccCcCCCccceEEEeCCCC
Q 020019 46 FRECAKWDDSGRR-FI-VSF-------------LDGGIGQVAVP-DDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRN 109 (332)
Q Consensus 46 ~pegia~d~~g~~-~~-~~~-------------~~g~I~~vd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g 109 (332)
.|..++++++|+. |+ +.- .++.+..++.+ +++. .......... .+..+.+++++|+..
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~----~~~~~~~~~~--~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKL----EKNVQNYEYQ--ENTGIHGMVFDPTET 157 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCE----EEEEEEEECC--TTCCEEEEEECTTSS
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcC----cceEeeEEeC--CCCcceEEEECCCCC
Confidence 4788999999984 33 221 46777666654 2431 1111111100 123789999999733
Q ss_pred eEEEEEeCcCCCccceEEEEECC-CCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEE--cC-CCceEE
Q 020019 110 RLLVVAADVFGNKYSAVAAYDLS-TWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKV--GV-KGEFLS 184 (332)
Q Consensus 110 ~l~v~~~~~~~~~~~~l~~~d~~-~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v--~~-~g~~~~ 184 (332)
.||+++.+ ...|.+||.+ +|+......+..+. ....|.+++++|||+ +|+++...+.|..+ +. +|+...
T Consensus 158 ~l~~~~~~-----~~~v~~~~~~~~g~~~~~~~~~~~~-~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 231 (365)
T 1jof_A 158 YLYSADLT-----ANKLWTHRKLASGEVELVGSVDAPD-PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVY 231 (365)
T ss_dssp EEEEEETT-----TTEEEEEEECTTSCEEEEEEEECSS-TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEEEcCC-----CCEEEEEEECCCCCEEEeeeEecCC-CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEE
Confidence 57777642 3578899988 78765433332111 135689999999995 89998877776554 54 355421
Q ss_pred ---Eec-CCC-CCCcc-cccCccccCeEE-EccCc-eEEEEeCCCC-----eEEEEeCC-CCCCccceeEEEE-ecCCCC
Q 020019 185 ---IIS-SPL-FTPKE-WYKNLVGLNGIV-YHPDG-FLIVIHTFSG-----NLFKIDIV-DGVGEGEEIKLIR-VAGGPL 249 (332)
Q Consensus 185 ---~~~-~~~-~~~p~-~~~~~~~~nGi~-~~~dG-~Lyva~~~~~-----~i~~id~~-~~~~~~~~~~~v~-~~g~~~ 249 (332)
.+. .+. +.... .......+.+++ ++||| .||+++...+ +|..++++ +++ ...... .. ...
T Consensus 232 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~----~~~~~~~~~-~~~ 306 (365)
T 1jof_A 232 THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS----IEKQLFLSP-TPT 306 (365)
T ss_dssp EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC----EEEEEEEEE-CSS
T ss_pred ccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC----EEEeeeeee-cCC
Confidence 111 110 00000 000011478999 99999 8999987655 77777664 442 222111 11 122
Q ss_pred CCCCeEEEeC---CC-eEEEEeCC
Q 020019 250 SFGDGLELLS---PT-KLVVAGNP 269 (332)
Q Consensus 250 ~~pdGi~~~~---dG-~l~va~~~ 269 (332)
..|.+++++| || .||+++..
T Consensus 307 ~~~~~~a~sp~~~dg~~l~v~~~~ 330 (365)
T 1jof_A 307 SGGHSNAVSPCPWSDEWMAITDDQ 330 (365)
T ss_dssp CCTTCCCEEECTTCTTEEEEECSS
T ss_pred CCcccceecCCCcCCCEEEEEEcC
Confidence 4688999998 65 57777643
No 122
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.19 E-value=6.8e-09 Score=105.90 Aligned_cols=235 Identities=11% Similarity=0.067 Sum_probs=144.7
Q ss_pred ccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceE
Q 020019 47 RECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAV 126 (332)
Q Consensus 47 pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l 126 (332)
..++..|++|++|++.. .+.|+++++.+++. +....+......+..|..|++ |+||++.. ..|
T Consensus 409 v~~i~~d~~g~lWigt~-~~Gl~~~~~~~~~~--------~~~~~~~~~~~~v~~i~~d~~-g~lwigt~-------~Gl 471 (781)
T 3v9f_A 409 VLCSLKDSEGNLWFGTY-LGNISYYNTRLKKF--------QIIELEKNELLDVRVFYEDKN-KKIWIGTH-------AGV 471 (781)
T ss_dssp EEEEEECTTSCEEEEET-TEEEEEECSSSCEE--------EECCSTTTCCCCEEEEEECTT-SEEEEEET-------TEE
T ss_pred eEEEEECCCCCEEEEec-cCCEEEEcCCCCcE--------EEeccCCCCCCeEEEEEECCC-CCEEEEEC-------Cce
Confidence 34677888999998653 46799999876542 122111222346788999986 99999974 368
Q ss_pred EEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecC-CCCCCcccccCccccCe
Q 020019 127 AAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISS-PLFTPKEWYKNLVGLNG 205 (332)
Q Consensus 127 ~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~-~~~~~p~~~~~~~~~nG 205 (332)
.+||+++++.................++++.|++|+||++... +.|++++++++....+.. ..+. ......
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~~l~-------~~~i~~ 543 (781)
T 3v9f_A 472 FVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG-GGVGIYTPDMQLVRKFNQYEGFC-------SNTINQ 543 (781)
T ss_dssp EEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS-SCEEEECTTCCEEEEECTTTTCS-------CSCEEE
T ss_pred EEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC-CCEEEEeCCCCeEEEccCCCCCC-------CCeeEE
Confidence 9999988776544332111111256788999999999998764 448999988553333321 1111 123568
Q ss_pred EEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEec-CCCCCCCCeEEEeCCCeEEEEeCCceEEEEcCCCceEEE
Q 020019 206 IVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA-GGPLSFGDGLELLSPTKLVVAGNPSARLVESSDGWETAA 284 (332)
Q Consensus 206 i~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~-g~~~~~pdGi~~~~dG~l~va~~~~~~~v~~~dg~~~~~ 284 (332)
|+.+++|.||++.. .|-|++++++++ ..+.+... |-+-....+|+.|++|+||++.+.+...+....+ +...
T Consensus 544 i~~d~~g~lWi~T~-~Glv~~~d~~~~-----~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~-~~~~ 616 (781)
T 3v9f_A 544 IYRSSKGQMWLATG-EGLVCFPSARNF-----DYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKK-CFYT 616 (781)
T ss_dssp EEECTTSCEEEEET-TEEEEESCTTTC-----CCEEECGGGTCSCCCCCEEEECSSSCEEEECSSCEEEEETTTT-EEEE
T ss_pred EEECCCCCEEEEEC-CCceEEECCCCC-----cEEEccccCCCCCceEEEEEECCCCCEEEEcCCceEEEECCCC-ceEE
Confidence 88999999999876 553399998876 34444322 1111245689999999999998776443333333 3222
Q ss_pred EEe--eecCCCcccceEEEE-ECCeEEEEEecC
Q 020019 285 VVA--KFSGPVHRLATAATV-KDGRVYLNHMLG 314 (332)
Q Consensus 285 ~~~--~~~~~~~~~pt~va~-~~g~lyv~~~~g 314 (332)
... .+....+. +.+++. .+|+||+...-|
T Consensus 617 ~~~~dGl~~~~f~-~~~~~~~~~G~l~~g~~~G 648 (781)
T 3v9f_A 617 YDHSNNIPQGSFI-SGCVTKDHNGLIYFGSING 648 (781)
T ss_dssp ECGGGTCCSSCEE-EEEEEECTTSCEEEEETTE
T ss_pred ecccCCccccccc-cCceEECCCCEEEEECCCc
Confidence 211 11111111 223444 689999965444
No 123
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.18 E-value=2.7e-09 Score=98.52 Aligned_cols=156 Identities=17% Similarity=0.161 Sum_probs=100.7
Q ss_pred CCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccCeEEEccC----ceEEEEeC--C
Q 020019 148 GKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPD----GFLIVIHT--F 220 (332)
Q Consensus 148 ~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~d----G~Lyva~~--~ 220 (332)
+...|.+|++.|||++||++...|+|++++++ |+...+...+.. ...+..++.||+++|| |+||++.+ .
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v----~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGV----SPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTC----CCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCce----eecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 45789999999999999999989999999976 554333221110 1124568999999985 68998754 5
Q ss_pred CCeEEEEeCCCC-----CCccceeEEEE-ecCCCCCCCCeEEEeCCCeEEEEeC--------------CceEEEEcCCCc
Q 020019 221 SGNLFKIDIVDG-----VGEGEEIKLIR-VAGGPLSFGDGLELLSPTKLVVAGN--------------PSARLVESSDGW 280 (332)
Q Consensus 221 ~~~i~~id~~~~-----~~~~~~~~~v~-~~g~~~~~pdGi~~~~dG~l~va~~--------------~~~~~v~~~dg~ 280 (332)
.++|.|+.++.+ ... +....+. .+....-....|++++||.||++.. ....+.+.+||.
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~-~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLG-APDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBC-CCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCEEEEEEeCCCCcccccCC-CcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 679999988752 111 1122221 2211122456799999999999941 122334556661
Q ss_pred e-------EEEEEeeecCCCcccceEEEE-ECCeEEEEEe
Q 020019 281 E-------TAAVVAKFSGPVHRLATAATV-KDGRVYLNHM 312 (332)
Q Consensus 281 ~-------~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~~ 312 (332)
. ..++.. -.++-|.++++ .+|+||++..
T Consensus 185 ip~~nPf~~~~i~a----~G~RNp~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 185 PAPGNPFPGSPVYS----YGHRNVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp BCTTCSSTTCCEEE----BCCSBCCEEEECTTCCEEEEEC
T ss_pred ccCCCCCCCCeEEe----eCCCCcceEEECCCCCEEEEec
Confidence 0 011211 13677899999 6799999664
No 124
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.17 E-value=1.6e-10 Score=110.89 Aligned_cols=157 Identities=11% Similarity=0.126 Sum_probs=104.6
Q ss_pred ccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCC---CCCCCccceEECC----CCcEEEEeCC-
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPS---DGKSCADDVTVDA----EGNAYVTDVT- 169 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~---~~~~~~ndiavd~----dG~lyvtd~~- 169 (332)
.|.+|+++++ |+|||++.. .++|++++..+|+......++... .+...+.||+++| +|.||++++.
T Consensus 28 ~P~~~a~~pd-G~l~V~e~~-----gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~ 101 (454)
T 1cru_A 28 KPHALLWGPD-NQIWLTERA-----TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFK 101 (454)
T ss_dssp SEEEEEECTT-SCEEEEETT-----TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred CceEEEEcCC-CcEEEEEcC-----CCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecc
Confidence 7999999997 999999863 236888987767665545553211 1245677999999 6789999864
Q ss_pred -----------CCeEEEEcCCC---ce---EEEec-CCCCCCcccccCccccCeEEEccCceEEEEeCC-----------
Q 020019 170 -----------GSKIWKVGVKG---EF---LSIIS-SPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTF----------- 220 (332)
Q Consensus 170 -----------~~~I~~v~~~g---~~---~~~~~-~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~----------- 220 (332)
..+|+|++.+. ++ ..++. .+. ...-.+++|+|++||.|||+...
T Consensus 102 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-------~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~ 174 (454)
T 1cru_A 102 NPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-------SKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFL 174 (454)
T ss_dssp CTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-------CSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTS
T ss_pred ccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC-------CCCCCCCeEeECCCCeEEEEECCCCCCCcccccc
Confidence 35899987542 21 12221 111 01234789999999999998542
Q ss_pred ---------------------CCeEEEEeCCCCCCccce-----eEEEEecCCCCCCCCeEEEeCCCeEEEEeCC
Q 020019 221 ---------------------SGNLFKIDIVDGVGEGEE-----IKLIRVAGGPLSFGDGLELLSPTKLVVAGNP 269 (332)
Q Consensus 221 ---------------------~~~i~~id~~~~~~~~~~-----~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~ 269 (332)
.++|+||++++....+.. ..++-.. .+..|.||+++++|+||++++.
T Consensus 175 ~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~--G~RNp~gla~dp~G~L~~~d~g 247 (454)
T 1cru_A 175 PNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL--GHRNPQGLAFTPNGKLLQSEQG 247 (454)
T ss_dssp CCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB--CCSEEEEEEECTTSCEEEEEEC
T ss_pred ccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE--CCCCcceEEECCCCCEEEEecC
Confidence 378999998743111111 1112222 3578999999999999999853
No 125
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.05 E-value=9.3e-07 Score=79.10 Aligned_cols=221 Identities=12% Similarity=0.071 Sum_probs=138.1
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
.....++++++++.+++...++.|..++..+++. .....+. . .......++++++...++++.. .+
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~----~~~~~~~-~---~~~~i~~~~~~~~~~~l~~~~~------dg 163 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP----RIKAELT-S---SAPACYALAISPDSKVCFSCCS------DG 163 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESSSEEEEEECCCC------EEEEEEE-C---SSSCEEEEEECTTSSEEEEEET------TS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc----ceeeecc-c---CCCceEEEEECCCCCEEEEEeC------CC
Confidence 3556789999999888777789999999876652 0100121 1 1124678999997334444433 35
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCcccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGL 203 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~ 203 (332)
.+..||.++++....... .......+++.++|+.+++-...+.|..++.. ++....... ....
T Consensus 164 ~v~~~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-----------~~~v 227 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQG-----HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF-----------TSQI 227 (337)
T ss_dssp CEEEEETTTTEEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-----------SSCE
T ss_pred cEEEEeCCCCceeeeeec-----ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC-----------CCce
Confidence 689999998876554332 13467889999999888887788999999976 443333221 1235
Q ss_pred CeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe-C-CceEEEEcCCCce
Q 020019 204 NGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG-N-PSARLVESSDGWE 281 (332)
Q Consensus 204 nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~-~-~~~~~v~~~dg~~ 281 (332)
..++++|+|.++++-...+.|..+++.++ ....+ . ........+++.++|+++++. . +..++.....+ +
T Consensus 228 ~~~~~s~~~~~l~~~~~~~~i~~~~~~~~-----~~~~~--~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~-~ 298 (337)
T 1gxr_A 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKP-----DKYQL--H-LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG-A 298 (337)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTSS-----CEEEE--C-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-C
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCC-----CeEEE--c-CCccceeEEEECCCCCEEEEecCCCcEEEEECCCC-e
Confidence 68999999944444456778999998866 22222 2 123456789999998877765 3 33344455555 2
Q ss_pred EEEEEeeecCCCcccceEEEE-ECCeEEE
Q 020019 282 TAAVVAKFSGPVHRLATAATV-KDGRVYL 309 (332)
Q Consensus 282 ~~~~~~~~~~~~~~~pt~va~-~~g~lyv 309 (332)
.... ... ....+++++ .++++++
T Consensus 299 ~~~~---~~~--~~~v~~~~~s~~~~~l~ 322 (337)
T 1gxr_A 299 SIFQ---SKE--SSSVLSCDISVDDKYIV 322 (337)
T ss_dssp EEEE---EEC--SSCEEEEEECTTSCEEE
T ss_pred EEEE---ecC--CCcEEEEEECCCCCEEE
Confidence 2111 111 233567778 5554444
No 126
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.05 E-value=6.7e-08 Score=98.74 Aligned_cols=235 Identities=12% Similarity=0.088 Sum_probs=142.2
Q ss_pred cceEEcCCCC-EEEEEecCCeEEEEECCCCCCCccceeeeEEec-ccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 48 ECAKWDDSGR-RFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVK-DLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 48 egia~d~~g~-~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
.++..|++|+ +|++.. .+.|+++++.+++. . .+.. .+......+..|..|++ |+||++.. ..
T Consensus 409 ~~i~~d~~g~~lWigt~-~~Gl~~~d~~~~~~-----~--~~~~~~~~l~~~~v~~i~~d~~-g~lwigt~-------~G 472 (795)
T 4a2l_A 409 KAVYVDEKKSLVYIGTH-AGGLSILHRNSGQV-----E--NFNQRNSQLVNENVYAILPDGE-GNLWLGTL-------SA 472 (795)
T ss_dssp EEEEEETTTTEEEEEET-TTEEEEEETTTCCE-----E--EECTTTSCCSCSCEEEEEECSS-SCEEEEES-------SC
T ss_pred EEEEEcCCCCEEEEEeC-cCceeEEeCCCCcE-----E--EeecCCCCcCCCeeEEEEECCC-CCEEEEec-------Cc
Confidence 4677889999 887654 46799999887652 1 2321 12223346788999985 99999974 35
Q ss_pred EEEEECCCCcEEEEEecCCC-CCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccC
Q 020019 126 VAAYDLSTWNRLFLTQLSGP-SDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~-~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
|.+||+++++.........+ .........+..|++|++|++.. +.|+++++++....+..... .+. -.....+
T Consensus 473 l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~--~~~--l~~~~i~ 546 (795)
T 4a2l_A 473 LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDIQKASILP--VSN--VTKLFTN 546 (795)
T ss_dssp EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEEEECCCSC--SCG--GGGSCEE
T ss_pred eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeEEEecCCC--CCC--CCCCeeE
Confidence 89999988766432211000 11124567899999999999886 57999988644333221000 000 0112456
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCC--CCCCeEEEeCCCeEEEEeCCceEEEEcCCCceE
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPL--SFGDGLELLSPTKLVVAGNPSARLVESSDGWET 282 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~--~~pdGi~~~~dG~l~va~~~~~~~v~~~dg~~~ 282 (332)
.|+.+++|.||++... -|++++++++ ..+.+... ..+ ....+|+.|++|+||++.+.+...+....+ +.
T Consensus 547 ~i~~d~~g~lWigT~~--Gl~~~d~~~~-----~~~~~~~~-~gl~~~~i~~i~~d~~g~lWi~t~~Gl~~~~~~~~-~~ 617 (795)
T 4a2l_A 547 CIYEASNGIIWVGTRE--GFYCFNEKDK-----QIKRYNTT-NGLPNNVVYGILEDSFGRLWLSTNRGISCFNPETE-KF 617 (795)
T ss_dssp EEEECTTSCEEEEESS--CEEEEETTTT-----EEEEECGG-GTCSCSCEEEEEECTTSCEEEEETTEEEEEETTTT-EE
T ss_pred EEEECCCCCEEEEeCC--CceeECCCCC-----cEEEeCCC-CCCchhheEEEEECCCCCEEEEcCCceEEEcCCCC-cE
Confidence 8899999999998764 5999998866 34444322 112 234578889999999999776443333333 32
Q ss_pred EEEEe--eecCCCcccceEEEE-ECCeEEEEEecC
Q 020019 283 AAVVA--KFSGPVHRLATAATV-KDGRVYLNHMLG 314 (332)
Q Consensus 283 ~~~~~--~~~~~~~~~pt~va~-~~g~lyv~~~~g 314 (332)
..... .+....+. ..+++. .+|+||+...-|
T Consensus 618 ~~~~~~dGl~~~~f~-~~~~~~~~~G~l~~g~~~G 651 (795)
T 4a2l_A 618 RNFTESDGLQSNQFN-TASYCRTSVGQMYFGGING 651 (795)
T ss_dssp EEECGGGTCSCSCEE-EEEEEECTTSCEEEEETTE
T ss_pred EEcCCcCCCccccCc-cCceeECCCCeEEEecCCc
Confidence 21111 11111111 123444 689999965444
No 127
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.03 E-value=7.3e-08 Score=98.46 Aligned_cols=236 Identities=11% Similarity=0.040 Sum_probs=141.9
Q ss_pred ccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEeccc-----CcCCCccceEEEeCCCCe-EEEEEeCcCC
Q 020019 47 RECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDL-----ELTGNGSLGLVLDHPRNR-LLVVAADVFG 120 (332)
Q Consensus 47 pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~gi~vd~~~g~-l~v~~~~~~~ 120 (332)
..++..|++|++|++.. .+.|.++++.+++. . .+...+ +...+.+..|..|++ |+ ||++..+
T Consensus 359 V~~i~~d~~g~lWiGt~-~~Gl~~~~~~~~~~-----~--~~~~~~~~~~~~l~~~~v~~i~~d~~-g~~lWigt~~--- 426 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTN-DGGLNLYNPITQRF-----T--SYTLQEDESARGIGSNNIKAVYVDEK-KSLVYIGTHA--- 426 (795)
T ss_dssp EEEEEECTTSCEEEEES-SSCEEEECTTTCCE-----E--EECCC------CCSCSCEEEEEEETT-TTEEEEEETT---
T ss_pred eEEEEECCCCCEEEEEC-CCCeEEEcCCCCcE-----E--EEecCCCCcccCCCCccEEEEEEcCC-CCEEEEEeCc---
Confidence 34677899999998764 46799999876652 1 222111 122346788999986 88 9998752
Q ss_pred CccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCc
Q 020019 121 NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNL 200 (332)
Q Consensus 121 ~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~ 200 (332)
+.|.+||.++++..... ...+.........+..|++|+||++.. +.|++++++........... .+.. -..
T Consensus 427 ---~Gl~~~d~~~~~~~~~~-~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~--~~~~-~~~ 497 (795)
T 4a2l_A 427 ---GGLSILHRNSGQVENFN-QRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEKEK--DGTP-VVS 497 (795)
T ss_dssp ---TEEEEEETTTCCEEEEC-TTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCBCT--TCCB-CCC
T ss_pred ---CceeEEeCCCCcEEEee-cCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEccccc--cccc-cCC
Confidence 46899999988765432 211111124567899999999999876 56999998754333221110 0000 001
Q ss_pred cccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEe--cCCCC--CCCCeEEEeCCCeEEEEeCCceEEEEc
Q 020019 201 VGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRV--AGGPL--SFGDGLELLSPTKLVVAGNPSARLVES 276 (332)
Q Consensus 201 ~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~--~g~~~--~~pdGi~~~~dG~l~va~~~~~~~v~~ 276 (332)
.....|..+++|.||++.. +-|+++++.++ .. .+.. ....+ .....|..|++|+||++...+......
T Consensus 498 ~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~-----~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~d~ 569 (795)
T 4a2l_A 498 KQITTLFRDSHKRLWIGGE--EGLSVFKQEGL-----DI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTREGFYCFNE 569 (795)
T ss_dssp CCEEEEEECTTCCEEEEES--SCEEEEEEETT-----EE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSCEEEEET
T ss_pred ceEEEEEECCCCCEEEEeC--CceEEEeCCCC-----eE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCCceeECC
Confidence 2356788999999999987 45999998865 23 2321 10111 234578889999999998765443333
Q ss_pred CCCceEEEEEeeecCCCcccceEEEE-ECCeEEEEEec
Q 020019 277 SDGWETAAVVAKFSGPVHRLATAATV-KDGRVYLNHML 313 (332)
Q Consensus 277 ~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~~~ 313 (332)
..+ +.... ....+-.-....+++. .+|+||++..-
T Consensus 570 ~~~-~~~~~-~~~~gl~~~~i~~i~~d~~g~lWi~t~~ 605 (795)
T 4a2l_A 570 KDK-QIKRY-NTTNGLPNNVVYGILEDSFGRLWLSTNR 605 (795)
T ss_dssp TTT-EEEEE-CGGGTCSCSCEEEEEECTTSCEEEEETT
T ss_pred CCC-cEEEe-CCCCCCchhheEEEEECCCCCEEEEcCC
Confidence 333 32222 1111100122344555 57899996543
No 128
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.02 E-value=1.1e-07 Score=85.78 Aligned_cols=180 Identities=9% Similarity=0.007 Sum_probs=121.1
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++.+++|++|+++ .++.|+++++. ++. .+.... .......+.+|.+ |++|++. +.
T Consensus 138 ~~~~~~~~~~g~l~vgt-~~~~l~~~d~~-g~~--------~~~~~~--~~~~~~~~~~d~~-g~l~v~t--------~~ 196 (330)
T 3hxj_A 138 IYATPIVSEDGTIYVGS-NDNYLYAINPD-GTE--------KWRFKT--NDAITSAASIGKD-GTIYFGS--------DK 196 (330)
T ss_dssp CCSCCEECTTSCEEEEC-TTSEEEEECTT-SCE--------EEEEEC--SSCCCSCCEECTT-CCEEEES--------SS
T ss_pred eeeeeEEcCCCEEEEEc-CCCEEEEECCC-CCE--------eEEEec--CCCceeeeEEcCC-CEEEEEe--------CE
Confidence 34567888899988755 35899999987 541 121111 1124566788875 9999985 35
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCe
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNG 205 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nG 205 (332)
|++|| .+++..+..... ......+++|++|++|++.. .+.|++++++|+......... .....
T Consensus 197 l~~~d-~~g~~~~~~~~~-----~~~~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~~----------~~~~~ 259 (330)
T 3hxj_A 197 VYAIN-PDGTEKWNFYAG-----YWTVTRPAISEDGTIYVTSL-DGHLYAINPDGTEKWRFKTGK----------RIESS 259 (330)
T ss_dssp EEEEC-TTSCEEEEECCS-----SCCCSCCEECTTSCEEEEET-TTEEEEECTTSCEEEEEECSS----------CCCSC
T ss_pred EEEEC-CCCcEEEEEccC-----CcceeceEECCCCeEEEEcC-CCeEEEECCCCCEeEEeeCCC----------Ccccc
Confidence 88999 677766554431 24567899999999999865 578999998887553332111 12345
Q ss_pred EEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCceE
Q 020019 206 IVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSAR 272 (332)
Q Consensus 206 i~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~~ 272 (332)
++++++|.||++.. .+.|++++++ ++ .......++ .....+..+++|+||++...+..
T Consensus 260 ~~~~~~g~l~v~t~-~ggl~~~d~~-g~----~~~~~~~~~---~~~~~~~~d~~g~l~~gt~~G~~ 317 (330)
T 3hxj_A 260 PVIGNTDTIYFGSY-DGHLYAINPD-GT----EKWNFETGS---WIIATPVIDENGTIYFGTRNGKF 317 (330)
T ss_dssp CEECTTSCEEEECT-TCEEEEECTT-SC----EEEEEECSS---CCCSCCEECTTCCEEEECTTSCE
T ss_pred ceEcCCCeEEEecC-CCCEEEECCC-Cc----EEEEEEcCC---ccccceEEcCCCEEEEEcCCCeE
Confidence 77888889999865 5679999974 42 344444432 34457788899999999876544
No 129
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.02 E-value=1.5e-07 Score=90.28 Aligned_cols=264 Identities=14% Similarity=0.099 Sum_probs=140.3
Q ss_pred CCc-cccceEEcCCCC--EEEEEecCCeEEEEECCCCCCCccceeeeEEecccCc---CCCccceEEEeCC---CCeEEE
Q 020019 43 SSF-FRECAKWDDSGR--RFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLEL---TGNGSLGLVLDHP---RNRLLV 113 (332)
Q Consensus 43 ~~~-~pegia~d~~g~--~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~gi~vd~~---~g~l~v 113 (332)
.++ .|.+|++.++|+ +|++.. .|+|++++.++......+....... ..+. ...++.||+++|+ ++.|||
T Consensus 11 ~gL~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~~~~~~~~~~~~-~~g~~~~~e~Gllgia~~P~f~~n~~lYv 88 (463)
T 2wg3_C 11 SGLRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIFKEPYLDIHKLV-QSGIKGGDERGLLSLAFHPNYKKNGKLYV 88 (463)
T ss_dssp EEESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBCSSCSEECTTTB-CCCCSSSCCCSEEEEEECTTHHHHCEEEE
T ss_pred cCCCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCeeeeeecCCccee-ccCccccCCCcceeeEeCCCCcCCCEEEE
Confidence 344 899999999985 776664 6999999865432110011100000 0110 0137899999985 589999
Q ss_pred EEeCcCC-------CccceEEEEECCCC--------cEEEEEecCCCCCCCCCccceEECCCCcEEEEe--C--------
Q 020019 114 VAADVFG-------NKYSAVAAYDLSTW--------NRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTD--V-------- 168 (332)
Q Consensus 114 ~~~~~~~-------~~~~~l~~~d~~~g--------~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd--~-------- 168 (332)
+...... ....+|.+|....+ +....+++.. ....++...|+++|||.|||+- .
T Consensus 89 ~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~-~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~ 167 (463)
T 2wg3_C 89 SYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAE-LHRKHLGGQLLFGPDGFLYIILGDGMITLDDME 167 (463)
T ss_dssp EEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEE-SSSSSCEEEEEECTTSCEEEEECCTTCCHHHHH
T ss_pred EEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCC-CCCcccCCcEeECCCCcEEEEeCCCCCCCCccc
Confidence 8653110 11247888876431 1223333321 2235778899999999999972 1
Q ss_pred -------CCCeEEEEcCCCce-----EEEecCCCCC-----CcccccCccccCeEEEccC-----c--eEEEEeCCC---
Q 020019 169 -------TGSKIWKVGVKGEF-----LSIISSPLFT-----PKEWYKNLVGLNGIVYHPD-----G--FLIVIHTFS--- 221 (332)
Q Consensus 169 -------~~~~I~~v~~~g~~-----~~~~~~~~~~-----~p~~~~~~~~~nGi~~~~d-----G--~Lyva~~~~--- 221 (332)
..|.|+|++++|+. ..-..++-.. ...+..++-+|.|++|+++ | ++|.+|...
T Consensus 168 ~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~ 247 (463)
T 2wg3_C 168 EMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNR 247 (463)
T ss_dssp HCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC-----
T ss_pred cccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCC
Confidence 25789999999841 1111121111 1123446778999999997 5 678788621
Q ss_pred --CeEEEEeCCCCCCc-cceeEEEEecCCCCCCCCeEEEeC-------CCeEEEEeCCc-eEEEEcC-CC--ceEEEEEe
Q 020019 222 --GNLFKIDIVDGVGE-GEEIKLIRVAGGPLSFGDGLELLS-------PTKLVVAGNPS-ARLVESS-DG--WETAAVVA 287 (332)
Q Consensus 222 --~~i~~id~~~~~~~-~~~~~~v~~~g~~~~~pdGi~~~~-------dG~l~va~~~~-~~~v~~~-dg--~~~~~~~~ 287 (332)
.+|.++.... ... ..++. ......-..|.||++-. .|.+++++... .+.+... ++ |....+..
T Consensus 248 ~~~ei~~i~~G~-~yG~~~P~~--~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~ 324 (463)
T 2wg3_C 248 SSARILQIIKGK-DYESEPSLL--EFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCL 324 (463)
T ss_dssp -CEEEEEEC-----CCSCCCCE--ECCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECE
T ss_pred CCCeEeeeccCC-CCCCCCCeE--EeeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeec
Confidence 2344443221 000 01221 22100013678888842 26688887543 2222222 22 22111211
Q ss_pred e-e---cCCCcccceEEEE-ECCeEEEEEe
Q 020019 288 K-F---SGPVHRLATAATV-KDGRVYLNHM 312 (332)
Q Consensus 288 ~-~---~~~~~~~pt~va~-~~g~lyv~~~ 312 (332)
. . ..+....|..+++ .+|.|||...
T Consensus 325 g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 325 GTSGSCRGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp EETTSSCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred CCcccccccccCcceEEEECCCCCEEEEec
Confidence 1 0 0122345788888 7899999654
No 130
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=1e-07 Score=97.12 Aligned_cols=231 Identities=11% Similarity=0.041 Sum_probs=139.8
Q ss_pred cceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecc------cCcCCCccceEEEeCCCCeEEEEEeCcCCC
Q 020019 48 ECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKD------LELTGNGSLGLVLDHPRNRLLVVAADVFGN 121 (332)
Q Consensus 48 egia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~------~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~ 121 (332)
..+..|++|++|++.. .+.|.++++.+... . .+... ..+....+..|..|++ |+||++..+
T Consensus 316 ~~i~~D~~g~lWigt~-~~Gl~~~~~~~~~~-----~--~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~lWigt~~---- 382 (781)
T 3v9f_A 316 RYIFQDSFNNIWIGTW-GGGINFISNAPPTF-----H--TWSYSPTQMNESSLSNKVVSSVCDDGQ-GKLWIGTDG---- 382 (781)
T ss_dssp EEEEECSSCCEEEEEB-SSCEEEECSSCCSC-----E--EEC----CCCSSCCSSSCEEEEEECTT-SCEEEEEBS----
T ss_pred EEEEEeCCCCEEEEec-CCeEEEeCCCCCcc-----e--eeccCccccccCCCCCcceEEEEEcCC-CCEEEEeCC----
Confidence 4578899999998764 46799998876553 2 22111 1222345788999986 999999742
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCC-ceEEEecCCCCCCcccccCc
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG-EFLSIISSPLFTPKEWYKNL 200 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g-~~~~~~~~~~~~~p~~~~~~ 200 (332)
+.|.+||.++++..... .+ ..........++.|++|+||+... .+.|+++++.. +...+. .... ..
T Consensus 383 --~Gl~~~~~~~~~~~~~~-~~-~~~~~~~v~~i~~d~~g~lWigt~-~~Gl~~~~~~~~~~~~~~-~~~~-------~~ 449 (781)
T 3v9f_A 383 --GGINVFENGKRVAIYNK-EN-RELLSNSVLCSLKDSEGNLWFGTY-LGNISYYNTRLKKFQIIE-LEKN-------EL 449 (781)
T ss_dssp --SCEEEEETTEEEEECC-------CCCSBEEEEEECTTSCEEEEET-TEEEEEECSSSCEEEECC-STTT-------CC
T ss_pred --CcEEEEECCCCeEEEcc-CC-CCCCCcceEEEEECCCCCEEEEec-cCCEEEEcCCCCcEEEec-cCCC-------CC
Confidence 45889998765443221 10 011124567889999999999854 36799999874 443322 1111 11
Q ss_pred cccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecC-CC--CCCCCeEEEeCCCeEEEEeCCceEEEEcC
Q 020019 201 VGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAG-GP--LSFGDGLELLSPTKLVVAGNPSARLVESS 277 (332)
Q Consensus 201 ~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g-~~--~~~pdGi~~~~dG~l~va~~~~~~~v~~~ 277 (332)
.....|+.+++|.||++.. +-|+++++.+++ ...+.... .. ......|+.|++|+||++..........+
T Consensus 450 ~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~ 522 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWIGTH--AGVFVIDLASKK-----VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTP 522 (781)
T ss_dssp CCEEEEEECTTSEEEEEET--TEEEEEESSSSS-----CCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECT
T ss_pred CeEEEEEECCCCCEEEEEC--CceEEEeCCCCe-----EEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeC
Confidence 2356788999999999976 469999998763 22232210 01 13466889999999999986322333444
Q ss_pred CCceEEEEEeeecCCCc--ccceEEEE-ECCeEEEEEecC
Q 020019 278 DGWETAAVVAKFSGPVH--RLATAATV-KDGRVYLNHMLG 314 (332)
Q Consensus 278 dg~~~~~~~~~~~~~~~--~~pt~va~-~~g~lyv~~~~g 314 (332)
+..+.... .. ...+ ....+++. .+|+||++..-|
T Consensus 523 ~~~~~~~~-~~--~~~l~~~~i~~i~~d~~g~lWi~T~~G 559 (781)
T 3v9f_A 523 DMQLVRKF-NQ--YEGFCSNTINQIYRSSKGQMWLATGEG 559 (781)
T ss_dssp TCCEEEEE-CT--TTTCSCSCEEEEEECTTSCEEEEETTE
T ss_pred CCCeEEEc-cC--CCCCCCCeeEEEEECCCCCEEEEECCC
Confidence 43122111 11 1112 22345666 679999965433
No 131
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.00 E-value=2.9e-06 Score=76.87 Aligned_cols=223 Identities=11% Similarity=0.122 Sum_probs=144.5
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....+++.+++.++++...++.|..+|..+++. .. .+...+ .....+++.++ ++.+++.. ..+.
T Consensus 82 ~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~----~~--~~~~~~----~~~~~~~~spd-g~~l~~g~-----~dg~ 145 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ----IK--SIDAGP----VDAWTLAFSPD-SQYLATGT-----HVGK 145 (321)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEE----EE--EEECCT----TCCCCEEECTT-SSEEEEEC-----TTSE
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCCE----EE--EEeCCC----ccEEEEEECCC-CCEEEEEc-----CCCc
Confidence 445678999998888777789999999877652 11 222111 24568999997 66555543 2467
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccC
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
+..||.++++....... .......+++.|+|+.+++-+..+.|..+|.. ++....+... ....+
T Consensus 146 v~i~~~~~~~~~~~~~~-----~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h----------~~~v~ 210 (321)
T 3ow8_A 146 VNIFGVESGKKEYSLDT-----RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH----------AMPIR 210 (321)
T ss_dssp EEEEETTTCSEEEEEEC-----SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC----------SSCCC
T ss_pred EEEEEcCCCceeEEecC-----CCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccc----------CCcee
Confidence 88999998877654432 12456789999999988888888999999875 4544333211 12357
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEEEcCCCceE
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLVESSDGWET 282 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~~dg~~~ 282 (332)
.++|+|||.++++-...+.|..++..+++ ....+. + .......+++.++|+++++.. ...++-....+
T Consensus 211 ~l~~spd~~~l~s~s~dg~i~iwd~~~~~----~~~~~~--~-h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~--- 280 (321)
T 3ow8_A 211 SLTFSPDSQLLVTASDDGYIKIYDVQHAN----LAGTLS--G-HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR--- 280 (321)
T ss_dssp EEEECTTSCEEEEECTTSCEEEEETTTCC----EEEEEC--C-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---
T ss_pred EEEEcCCCCEEEEEcCCCeEEEEECCCcc----eeEEEc--C-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC---
Confidence 89999999666666778889889988662 333332 1 224456899999988777753 33444455556
Q ss_pred EEEEeeecCCCcccceEEEE-ECCeEEEEE
Q 020019 283 AAVVAKFSGPVHRLATAATV-KDGRVYLNH 311 (332)
Q Consensus 283 ~~~~~~~~~~~~~~pt~va~-~~g~lyv~~ 311 (332)
+....+..- .....++++ .+++..++.
T Consensus 281 -~~~~~~~~h-~~~v~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 281 -TCVHTFFDH-QDQVWGVKYNGNGSKIVSV 308 (321)
T ss_dssp -EEEEEECCC-SSCEEEEEECTTSSEEEEE
T ss_pred -EEEEEEcCC-CCcEEEEEECCCCCEEEEE
Confidence 233333211 223467888 555555543
No 132
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.97 E-value=3e-06 Score=75.68 Aligned_cols=208 Identities=11% Similarity=0.093 Sum_probs=129.6
Q ss_pred EEecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCc
Q 020019 39 HYHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADV 118 (332)
Q Consensus 39 ~~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~ 118 (332)
...........++++++++++++.. ++.|..++..+++.. .......... .......++++++ ++++++...
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~----~~~~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~~- 117 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK----SPVSQLDCLN-RDNYIRSCKLLPD-GCTLIVGGE- 117 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC----SCSEEEECSC-TTSBEEEEEECTT-SSEEEEEES-
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce----eeeecccccC-CCCcEEEEEEcCC-CCEEEEEcC-
Confidence 3334444567899999999887776 899999998765421 1001111001 1125788999997 554444321
Q ss_pred CCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccc
Q 020019 119 FGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWY 197 (332)
Q Consensus 119 ~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~ 197 (332)
.+.+..||.++++......+.. .......+++.++|+.+++-...+.|..++.. ++....+..
T Consensus 118 ----d~~i~~~d~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~--------- 181 (337)
T 1gxr_A 118 ----ASTLSIWDLAAPTPRIKAELTS---SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG--------- 181 (337)
T ss_dssp ----SSEEEEEECCCC--EEEEEEEC---SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC---------
T ss_pred ----CCcEEEEECCCCCcceeeeccc---CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec---------
Confidence 3578999998877444344421 13456789999999877777778889999876 443333221
Q ss_pred cCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe--CCceEEEE
Q 020019 198 KNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG--NPSARLVE 275 (332)
Q Consensus 198 ~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~--~~~~~~v~ 275 (332)
.......++++|+|..+++-...+.|..+++.++ +.+..+... .....+++.++|+++++. .....+..
T Consensus 182 -~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~----~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 182 -HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG----RQLQQHDFT----SQIFSLGYCPTGEWLAVGMESSNVEVLH 252 (337)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT----EEEEEEECS----SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred -ccCceEEEEECCCCCEEEEEecCCcEEEEECCCC----ceEeeecCC----CceEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 1124578999999944444556788999999876 234444332 345688999998866664 23344444
Q ss_pred cCCC
Q 020019 276 SSDG 279 (332)
Q Consensus 276 ~~dg 279 (332)
...+
T Consensus 253 ~~~~ 256 (337)
T 1gxr_A 253 VNKP 256 (337)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 4544
No 133
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.97 E-value=2.2e-08 Score=97.82 Aligned_cols=207 Identities=10% Similarity=-0.052 Sum_probs=130.1
Q ss_pred CccccceEE-c-CCCCEEEEEe------------------cCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEE
Q 020019 44 SFFRECAKW-D-DSGRRFIVSF------------------LDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLV 103 (332)
Q Consensus 44 ~~~pegia~-d-~~g~~~~~~~------------------~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 103 (332)
+..|+|+++ . |+++.+|++- ..+.+..||.++.+ +.. ++. .. ..|.+++
T Consensus 133 g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~----v~~--qI~----Vg-g~pd~~~ 201 (595)
T 1fwx_A 133 AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE----VAW--QVL----VS-GNLDNCD 201 (595)
T ss_dssp CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE----EEE--EEE----ES-SCCCCEE
T ss_pred CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCe----EEE--EEE----eC-CCccceE
Confidence 457999998 4 7887666651 23478999987654 222 121 11 2688999
Q ss_pred EeCCCCeEEEEEeCcCC--------------------------------CccceEEEEECCC--CcE-EEEEecCCCCCC
Q 020019 104 LDHPRNRLLVVAADVFG--------------------------------NKYSAVAAYDLST--WNR-LFLTQLSGPSDG 148 (332)
Q Consensus 104 vd~~~g~l~v~~~~~~~--------------------------------~~~~~l~~~d~~~--g~~-~~~~~l~~~~~~ 148 (332)
++++.+.+|+++.+... ...+.+.++|.++ ++. ...++.
T Consensus 202 ~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv------ 275 (595)
T 1fwx_A 202 ADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI------ 275 (595)
T ss_dssp ECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE------
T ss_pred ECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec------
Confidence 99986678888743200 0023477888877 444 444444
Q ss_pred CCCccceEECCCCc-EEEEeCCCCeEEEEcCCCceEEEec--CCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEE
Q 020019 149 KSCADDVTVDAEGN-AYVTDVTGSKIWKVGVKGEFLSIIS--SPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLF 225 (332)
Q Consensus 149 ~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~g~~~~~~~--~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~ 225 (332)
...|+++.++|||+ +|+++...+.|..+|.+.....+-. .+....-...+...+|.+++|++||++|++...+++|.
T Consensus 276 g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 276 ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVV 355 (595)
T ss_dssp ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEE
T ss_pred CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEE
Confidence 24789999999996 9999999999999997622100000 00000000012346789999999999999999999999
Q ss_pred EEeCCCCC------CccceeEEEEecCCC--CCCCCeEEEeCCCe-EEEEe
Q 020019 226 KIDIVDGV------GEGEEIKLIRVAGGP--LSFGDGLELLSPTK-LVVAG 267 (332)
Q Consensus 226 ~id~~~~~------~~~~~~~~v~~~g~~--~~~pdGi~~~~dG~-l~va~ 267 (332)
+++.++.. -..+.+..+.+.-++ .....|+++++||+ ||+++
T Consensus 356 kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 356 KWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp EEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred EEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 99987510 001245555543111 22346778889988 45555
No 134
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.97 E-value=1.5e-07 Score=87.64 Aligned_cols=206 Identities=13% Similarity=0.065 Sum_probs=132.9
Q ss_pred cccceEEcCCCCEEEEEec---------------CCeEEEEECCCC--CCCccceeeeEEecccCcCCCccceEEEe-C-
Q 020019 46 FRECAKWDDSGRRFIVSFL---------------DGGIGQVAVPDD--YPPGTVLEEVTLVKDLELTGNGSLGLVLD-H- 106 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~---------------~g~I~~vd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~gi~vd-~- 106 (332)
...++.+|+.+++|+.+.. ..+|..+|+.+. + ++.+..+..+.-..+...+.|++| .
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~----li~~y~~p~~~~~~~S~l~di~VD~~~ 163 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYP----EVVRYYFPTRLVEKPTYFGGFAVDVAN 163 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCC----EEEEEECCGGGCCCGGGEEEEEEEESC
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCce----eEEEEECCHHhcccCCccceEEEeccc
Confidence 6678999999999998821 126999999987 5 233222221100111256899999 2
Q ss_pred -C----CCeEEEEEeCcCCCccceEEEEECCCCcEEEEEec-CCCCC-------C-----CCCccceEECCC----C-cE
Q 020019 107 -P----RNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQL-SGPSD-------G-----KSCADDVTVDAE----G-NA 163 (332)
Q Consensus 107 -~----~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l-~~~~~-------~-----~~~~ndiavd~d----G-~l 163 (332)
. ++.+|++|.. ...|.+||+++++..+...- -.|.. + .....+|+++|+ + .|
T Consensus 164 ~~~~c~~~~aYItD~~-----~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~L 238 (381)
T 3q6k_A 164 PKGDCSETFVYITNFL-----RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPA 238 (381)
T ss_dssp TTTTSCSEEEEEEETT-----TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEE
T ss_pred CCCCCCccEEEEEcCC-----CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEE
Confidence 1 4789999864 45799999999876554320 00110 1 136778999987 5 49
Q ss_pred EEEeCCCCeEEEEcCC----Cce---EEEecCCCCCCcccccCccccCeEEEc-cCceEEEEeCCCCeEEEEeCCCCCCc
Q 020019 164 YVTDVTGSKIWKVGVK----GEF---LSIISSPLFTPKEWYKNLVGLNGIVYH-PDGFLIVIHTFSGNLFKIDIVDGVGE 235 (332)
Q Consensus 164 yvtd~~~~~I~~v~~~----g~~---~~~~~~~~~~~p~~~~~~~~~nGi~~~-~dG~Lyva~~~~~~i~~id~~~~~~~ 235 (332)
|+.--....+|++... ... ...+.... | .....++++| .+|.||+++...+.|.++++.+....
T Consensus 239 Yf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg---~-----~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~ 310 (381)
T 3q6k_A 239 YYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRG---K-----YNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLR 310 (381)
T ss_dssp EEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECC---T-----TCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBC
T ss_pred EEEECCCCcEEEEEHHHhhCcchhhceEEeeecC---C-----CCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccc
Confidence 9998888899998732 111 01111100 0 0122356776 67899999999999999998861111
Q ss_pred cceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC
Q 020019 236 GEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP 269 (332)
Q Consensus 236 ~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~ 269 (332)
......+... ..+..||+|.++.+|.||+..|+
T Consensus 311 ~~n~~~l~~d-~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 311 MKNTDVVYTS-SRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp GGGEEEEEEC-TTCCSEEEEEECTTSCEEEEECS
T ss_pred cCceEEEEEC-CCccccCeEEECCCCeEEEEECc
Confidence 1134445444 36778999999999999999765
No 135
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.95 E-value=3.4e-06 Score=76.30 Aligned_cols=217 Identities=12% Similarity=0.071 Sum_probs=135.0
Q ss_pred ceeEEEecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEE
Q 020019 35 THVYHYHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVV 114 (332)
Q Consensus 35 ~~~i~~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~ 114 (332)
...+.+.+.......++++++|+++++...++.|..++..+++. .. .+... ......++++++ ++++++
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~----~~--~~~~h----~~~v~~~~~~~~-~~~l~s 91 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGER----LG--TLDGH----TGTIWSIDVDCF-TKYCVT 91 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCE----EE--EECCC----SSCEEEEEECTT-SSEEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchh----hh--hhhhc----CCcEEEEEEcCC-CCEEEE
Confidence 34566777666778899999999888877789999999876652 11 22211 125688999996 654444
Q ss_pred EeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCC-----CeEEEEcCCCc--e--EEE
Q 020019 115 AADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTG-----SKIWKVGVKGE--F--LSI 185 (332)
Q Consensus 115 ~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~-----~~I~~v~~~g~--~--~~~ 185 (332)
... .+.|..||.++++....... ......+++.++|+.+++.... +.|..++.... . ...
T Consensus 92 ~~~-----dg~i~iwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 92 GSA-----DYSIKLWDVSNGQCVATWKS------PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp EET-----TTEEEEEETTTCCEEEEEEC------SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred EeC-----CCeEEEEECCCCcEEEEeec------CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 332 45799999999887766553 2456789999999876665555 77777765411 1 111
Q ss_pred ecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEE
Q 020019 186 ISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVV 265 (332)
Q Consensus 186 ~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~v 265 (332)
........-...........++++++|.++++-...+.|..+++.+.. ..+..+.. .......+++.++|++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~---~~~~v~~~~~~~~~~~l~ 234 (369)
T 3zwl_B 161 VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY---EYVDSIDL---HEKSISDMQFSPDLTYFI 234 (369)
T ss_dssp ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT---EEEEEEEC---CSSCEEEEEECTTSSEEE
T ss_pred cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc---EeEEEEec---CCCceeEEEECCCCCEEE
Confidence 100000000000112256789999999444444567889999998731 23443432 224567899999988666
Q ss_pred Ee-C-CceEEEEcCCC
Q 020019 266 AG-N-PSARLVESSDG 279 (332)
Q Consensus 266 a~-~-~~~~~v~~~dg 279 (332)
+. . ...++....++
T Consensus 235 ~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 235 TSSRDTNSFLVDVSTL 250 (369)
T ss_dssp EEETTSEEEEEETTTC
T ss_pred EecCCceEEEEECCCC
Confidence 64 3 33444455555
No 136
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.90 E-value=8.1e-06 Score=74.32 Aligned_cols=228 Identities=12% Similarity=0.103 Sum_probs=139.6
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++|+.+++...++.|..++..+.+.. ......+.... .....+.+.++ +.++.+.. .+.
T Consensus 99 ~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~--~~~~~~~~~h~----~~v~~~~~~~~-~~l~s~s~------d~~ 165 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN--VRVSRELAGHT----GYLSCCRFLDD-NQIVTSSG------DTT 165 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS--CEEEEEEECCS----SCEEEEEEEET-TEEEEEET------TSC
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc--ceeEEEecCCC----ccEEEEEECCC-CcEEEEEC------CCc
Confidence 3456889999998877777899988887654310 00000121111 24567777775 77666554 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccC
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
+..||.++++....+. +. ......+++.|+|+++++-+..+.|..+|.. ++....+.. .....+
T Consensus 166 i~~wd~~~~~~~~~~~--~h---~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~----------h~~~v~ 230 (340)
T 1got_B 166 CALWDIETGQQTTTFT--GH---TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG----------HESDIN 230 (340)
T ss_dssp EEEEETTTTEEEEEEC--CC---SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC----------CSSCEE
T ss_pred EEEEECCCCcEEEEEc--CC---CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC----------CcCCEE
Confidence 8899999887654432 11 2456789999999999998888988888865 443332211 112467
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC--ceEEEEcCCCceE
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP--SARLVESSDGWET 282 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~--~~~~v~~~dg~~~ 282 (332)
.++++|+|.++++-...+.|..+|+.++ +.+..+... ........+++.++|+++++... ..++-....+...
T Consensus 231 ~v~~~p~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 231 AICFFPNGNAFATGSDDATCRLFDLRAD----QELMTYSHD-NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCT-TCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEECCCC----cEEEEEccC-CcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEe
Confidence 8999999966666667888988998865 233333322 11234567899999998888633 3333344445222
Q ss_pred EEEEeeecCCCcccceEEEE-ECCeEEEEE
Q 020019 283 AAVVAKFSGPVHRLATAATV-KDGRVYLNH 311 (332)
Q Consensus 283 ~~~~~~~~~~~~~~pt~va~-~~g~lyv~~ 311 (332)
..+.+ .-...+++++ .++++.++.
T Consensus 306 ----~~~~~-h~~~v~~~~~s~dg~~l~s~ 330 (340)
T 1got_B 306 ----GVLAG-HDNRVSCLGVTDDGMAVATG 330 (340)
T ss_dssp ----EEEEC-CSSCEEEEEECTTSSCEEEE
T ss_pred ----eEeec-CCCcEEEEEEcCCCCEEEEE
Confidence 22221 1123467888 566555543
No 137
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.88 E-value=9.7e-06 Score=72.37 Aligned_cols=205 Identities=18% Similarity=0.146 Sum_probs=133.6
Q ss_pred EEEecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeC
Q 020019 38 YHYHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAAD 117 (332)
Q Consensus 38 i~~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~ 117 (332)
..+.+.......++++++|+++++...++.|..++..+++. .. .+... ......++++++ ++++++...
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~----~~--~~~~h----~~~v~~~~~~~~-~~~l~s~~~ 85 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF----EK--TISGH----KLGISDVAWSSD-SNLLVSASD 85 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EE--EECCC----SSCEEEEEECTT-SSEEEEEET
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc----ch--hhccC----CCceEEEEEcCC-CCEEEEECC
Confidence 34444444567899999999888777789999999876652 11 22111 125688999997 665554432
Q ss_pred cCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCccc
Q 020019 118 VFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEW 196 (332)
Q Consensus 118 ~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~ 196 (332)
.+.+.+||.++++......- .......+++.|+++++++-...+.|..+|.. ++....+...
T Consensus 86 -----d~~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~------- 148 (312)
T 4ery_A 86 -----DKTLKIWDVSSGKCLKTLKG-----HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH------- 148 (312)
T ss_dssp -----TSEEEEEETTTCCEEEEEEC-----CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC-------
T ss_pred -----CCEEEEEECCCCcEEEEEcC-----CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC-------
Confidence 35788999998887654432 12456779999999988888888889888876 4443332211
Q ss_pred ccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEE
Q 020019 197 YKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLV 274 (332)
Q Consensus 197 ~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v 274 (332)
......++++++|.++++-...+.|..+++.+++ .+..+... .......++++++|+.+++.. +..++.
T Consensus 149 ---~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~iw 219 (312)
T 4ery_A 149 ---SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ----CLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLW 219 (312)
T ss_dssp ---SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEEECCS--SCCCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred ---CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc----eeeEEecc--CCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence 1235689999999555555667889889988762 33333221 222345688999988777652 334444
Q ss_pred EcCCC
Q 020019 275 ESSDG 279 (332)
Q Consensus 275 ~~~dg 279 (332)
....+
T Consensus 220 d~~~~ 224 (312)
T 4ery_A 220 DYSKG 224 (312)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 55555
No 138
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.84 E-value=5e-06 Score=75.34 Aligned_cols=184 Identities=13% Similarity=0.060 Sum_probs=125.0
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++|+.+++...++.|..++..+++. . ..+.. .+.....++++++ ++++++... .+.
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~-----~-~~~~~----~~~~v~~~~~spd-g~~lasg~~-----dg~ 187 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-----E-YSLDT----RGKFILSIAYSPD-GKYLASGAI-----DGI 187 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTTCSE-----E-EEEEC----SSSCEEEEEECTT-SSEEEEEET-----TSC
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce-----e-EEecC----CCceEEEEEECCC-CCEEEEEcC-----CCe
Confidence 445789999999888887789999999876652 1 12221 1125678999997 665554432 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccC
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
|..||.++++......- . ....+.+++.|+|+++++-+..+.|..+|.. ++....+.. ......
T Consensus 188 i~iwd~~~~~~~~~~~~--h---~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----------h~~~v~ 252 (321)
T 3ow8_A 188 INIFDIATGKLLHTLEG--H---AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG----------HASWVL 252 (321)
T ss_dssp EEEEETTTTEEEEEECC--C---SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC----------CSSCEE
T ss_pred EEEEECCCCcEEEEEcc--c---CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC----------CCCceE
Confidence 88999998877644321 1 2456789999999988888888888888865 343332211 112356
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
.++|+|+|..+++-...++|..+++.++ +.+..+.. ......++++.++|+.+++.
T Consensus 253 ~~~~sp~~~~l~s~s~D~~v~iwd~~~~----~~~~~~~~---h~~~v~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 253 NVAFCPDDTHFVSSSSDKSVKVWDVGTR----TCVHTFFD---HQDQVWGVKYNGNGSKIVSV 308 (321)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECC---CSSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCC----EEEEEEcC---CCCcEEEEEECCCCCEEEEE
Confidence 8999999955556667788988998876 23433321 22456789999998877764
No 139
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.82 E-value=3.2e-05 Score=68.96 Aligned_cols=227 Identities=14% Similarity=0.099 Sum_probs=135.3
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++++.+++...++.|..++..+++. .. .+.... .....+.++++ +.++++... .+.
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~----~~--~~~~~~----~~v~~~~~~~~-~~~l~s~~~-----d~~ 130 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC----LK--TLKGHS----NYVFCCNFNPQ-SNLIVSGSF-----DES 130 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----EE--EEECCS----SCEEEEEECSS-SSEEEEEET-----TSC
T ss_pred ceEEEEEcCCCCEEEEECCCCEEEEEECCCCcE----EE--EEcCCC----CCEEEEEEcCC-CCEEEEEeC-----CCc
Confidence 456789999999888887789999999876652 11 232111 24678899997 554544432 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccC
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
+..||.++++....... .......+++.++|+++++-+..+.|..+|.. ++....+... ......
T Consensus 131 i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---------~~~~~~ 196 (312)
T 4ery_A 131 VRIWDVKTGKCLKTLPA-----HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD---------DNPPVS 196 (312)
T ss_dssp EEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCS---------SCCCEE
T ss_pred EEEEECCCCEEEEEecC-----CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEecc---------CCCceE
Confidence 89999998876544322 12346779999999988888888889888875 4433322111 112346
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEEEcCCCceE
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLVESSDGWET 282 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~~dg~~~ 282 (332)
.++++|+|..+++-...+.|..+++.+++ .+..+................+++.++++.. +..++.....+
T Consensus 197 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--- 269 (312)
T 4ery_A 197 FVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK--- 269 (312)
T ss_dssp EEEECTTSSEEEEEETTTEEEEEETTTTE----EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC---
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCc----EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc---
Confidence 78999999545555667889999988762 3333332100111112222235677776653 23444445555
Q ss_pred EEEEeeecCCCcccceEEEE-ECCeEEEEE
Q 020019 283 AAVVAKFSGPVHRLATAATV-KDGRVYLNH 311 (332)
Q Consensus 283 ~~~~~~~~~~~~~~pt~va~-~~g~lyv~~ 311 (332)
++...+... .....++++ .++.+.++.
T Consensus 270 -~~~~~~~~h-~~~v~~~~~~p~~~~l~s~ 297 (312)
T 4ery_A 270 -EIVQKLQGH-TDVVISTACHPTENIIASA 297 (312)
T ss_dssp -CEEEEECCC-SSCEEEEEECSSSSEEEEE
T ss_pred -hhhhhhhcc-CCcEEEEeecCcCCceEEE
Confidence 233333321 223456777 555555543
No 140
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.80 E-value=9.2e-06 Score=78.80 Aligned_cols=220 Identities=11% Similarity=0.094 Sum_probs=138.5
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
...+++++++|+.+++...++.|..++.. ++. .+ .+.... ..+.+++++++ ++.+++... .+.
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~~~----~~--~~~~~~----~~v~~~~~s~d-g~~l~~~~~-----d~~ 408 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDKTVKLWNRN-GQL----LQ--TLTGHS----SSVRGVAFSPD-GQTIASASD-----DKT 408 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETT-CCE----EE--EEECCS----SCEEEEEECTT-SSCEEEEET-----TSE
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEcCC-CCE----EE--EecCCC----CCeEEEEECCC-CCEEEEEeC-----CCE
Confidence 44578999999988777778899999864 331 12 222111 25688999997 664444332 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCe
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNG 205 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nG 205 (332)
|..||.+ ++......- . .....++++.||++.+++-+..+.|..++.+++....+... ......
T Consensus 409 v~~~~~~-~~~~~~~~~--~---~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~----------~~~v~~ 472 (577)
T 2ymu_A 409 VKLWNRN-GQLLQTLTG--H---SSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGH----------SSSVRG 472 (577)
T ss_dssp EEEECTT-CCEEEEEEC--C---SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECC----------SSCEEE
T ss_pred EEEEeCC-CCEEEEecC--C---CCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCC----------CCCEEE
Confidence 8889964 555433321 1 24567899999999888888889998888887755433211 123578
Q ss_pred EEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe-CCceEEEEcCCCceEEE
Q 020019 206 IVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG-NPSARLVESSDGWETAA 284 (332)
Q Consensus 206 i~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~-~~~~~~v~~~dg~~~~~ 284 (332)
++|+|||.+.++-...+.|..++.+.. .++.+.. .......+++.+||+++++. ......+...++...
T Consensus 473 ~~~spd~~~las~~~d~~i~iw~~~~~-----~~~~~~~---h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~-- 542 (577)
T 2ymu_A 473 VAFSPDGQTIASASDDKTVKLWNRNGQ-----LLQTLTG---HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLL-- 542 (577)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSC-----EEEEEEC---CSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEE--
T ss_pred EEEcCCCCEEEEEeCCCEEEEEcCCCC-----EEEEEeC---CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEE--
Confidence 999999966666566778887886532 4444442 22456789999999877764 333233444566222
Q ss_pred EEeeecCCCcccceEEEE-ECCeEEEEE
Q 020019 285 VVAKFSGPVHRLATAATV-KDGRVYLNH 311 (332)
Q Consensus 285 ~~~~~~~~~~~~pt~va~-~~g~lyv~~ 311 (332)
..+.+- -...++++| .+++.+++.
T Consensus 543 --~~~~~h-~~~v~~~~fs~dg~~l~s~ 567 (577)
T 2ymu_A 543 --QTLTGH-SSSVWGVAFSPDGQTIASA 567 (577)
T ss_dssp --EEEECC-SSCEEEEEECTTSSCEEEE
T ss_pred --EEEcCC-CCCEEEEEEcCCCCEEEEE
Confidence 222211 123477888 677666643
No 141
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.79 E-value=6.8e-06 Score=74.69 Aligned_cols=232 Identities=9% Similarity=0.032 Sum_probs=135.0
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++|+++++...++.|..++..+++. .....+... ......++++++ ++++++... .+.
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~----~~~~~~~~h----~~~v~~~~~~~~-~~~l~~~~~-----dg~ 75 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW----VQVHELKEH----NGQVTGVDWAPD-SNRIVTCGT-----DRN 75 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEE----EEEEEEECC----SSCEEEEEEETT-TTEEEEEET-----TSC
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE----EeeeeecCC----CCcccEEEEeCC-CCEEEEEcC-----CCe
Confidence 456799999999888776789999998876531 010122211 125789999996 654444332 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCC-c-e--EEEecCCCCCCcccccCcc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG-E-F--LSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g-~-~--~~~~~~~~~~~p~~~~~~~ 201 (332)
+..||.++++......+.. .......+++.++|+.+++-...+.|..++.+. + . ....... ...
T Consensus 76 i~vwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~---------~~~ 143 (372)
T 1k8k_C 76 AYVWTLKGRTWKPTLVILR---INRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKP---------IRS 143 (372)
T ss_dssp EEEEEEETTEEEEEEECCC---CSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTT---------CCS
T ss_pred EEEEECCCCeeeeeEEeec---CCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecc---------cCC
Confidence 8899998887655554421 135678899999998777766677766655432 2 1 1111111 123
Q ss_pred ccCeEEEccCceEEEEeCCCCeEEEEeCCCCCC--------------ccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 202 GLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVG--------------EGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 202 ~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~--------------~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
....+++++++.++++-...+.|..++...... .+..+..+. ........+++.++|+++++.
T Consensus 144 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~ 220 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS---SSCGWVHGVCFSANGSRVAWV 220 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC---CCSSCEEEEEECSSSSEEEEE
T ss_pred CeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC---CCCCeEEEEEECCCCCEEEEE
Confidence 467999999995555555677888888542110 011232222 122456789999998766664
Q ss_pred -CC-ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-ECCeEEEEE
Q 020019 268 -NP-SARLVESSDGWETAAVVAKFSGPVHRLATAATV-KDGRVYLNH 311 (332)
Q Consensus 268 -~~-~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~ 311 (332)
.. ..++.....+... ..+... ....+++++ .+++++++.
T Consensus 221 ~~d~~i~i~d~~~~~~~----~~~~~~-~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 221 SHDSTVCLADADKKMAV----ATLASE-TLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp ETTTEEEEEEGGGTTEE----EEEECS-SCCEEEEEEEETTEEEEEE
T ss_pred eCCCEEEEEECCCCcee----EEEccC-CCCeEEEEEecCCCEEEEE
Confidence 33 3444455555222 222211 122366777 666655543
No 142
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.77 E-value=3.1e-06 Score=79.73 Aligned_cols=181 Identities=12% Similarity=0.156 Sum_probs=114.4
Q ss_pred cccceEEcCCCCEEEEEecC---CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCe-EEEEEeCcCCC
Q 020019 46 FRECAKWDDSGRRFIVSFLD---GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR-LLVVAADVFGN 121 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~---g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~-l~v~~~~~~~~ 121 (332)
...+++|+|+|+.++....+ ..|+.++..+++. . .+...+ .....++++|+ |+ |+++....
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-----~--~l~~~~----~~~~~~~~spd-g~~la~~~~~~--- 244 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-----R--QVASFP----RHNGAPAFSPD-GSKLAFALSKT--- 244 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-----E--EEECCS----SCEEEEEECTT-SSEEEEEECTT---
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-----E--EeecCC----CcccCEEEcCC-CCEEEEEEecC---
Confidence 44578999999866554333 4899999887752 1 233222 24678999997 65 55443321
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCC--CCeEEEEcCCCceEEEecCCCCCCccccc
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVT--GSKIWKVGVKGEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~--~~~I~~v~~~g~~~~~~~~~~~~~p~~~~ 198 (332)
+...|+.||+++++.. .+.. .......+++.|||+ |+++... ...||.++.++.....+...
T Consensus 245 g~~~i~~~d~~~~~~~---~l~~---~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~--------- 309 (415)
T 2hqs_A 245 GSLNLYVMDLASGQIR---QVTD---GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE--------- 309 (415)
T ss_dssp SSCEEEEEETTTCCEE---ECCC---CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS---------
T ss_pred CCceEEEEECCCCCEE---eCcC---CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC---------
Confidence 2346999999988763 3321 124566799999997 6655433 34899999875422221110
Q ss_pred CccccCeEEEccCc-eEEEEeCC--CCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEE
Q 020019 199 NLVGLNGIVYHPDG-FLIVIHTF--SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVA 266 (332)
Q Consensus 199 ~~~~~nGi~~~~dG-~Lyva~~~--~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va 266 (332)
......++|+||| .|+++... ...|+.++++++ ....+.. . .....+++.+||+.++.
T Consensus 310 -~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~-----~~~~l~~---~-~~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 310 -GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG-----GVQVLSS---T-FLDETPSLAPNGTMVIY 370 (415)
T ss_dssp -SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC-----CEEECCC---S-SSCEEEEECTTSSEEEE
T ss_pred -CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC-----CEEEecC---C-CCcCCeEEcCCCCEEEE
Confidence 1234578999999 78877665 358999999876 3332221 1 25678899999884443
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.76 E-value=5.7e-06 Score=72.12 Aligned_cols=184 Identities=10% Similarity=0.089 Sum_probs=112.0
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCC-CCCCccceeeeEEecccCcCCCccceEEEeCCCCe-EEEEEeCcCCCc
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPD-DYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR-LLVVAADVFGNK 122 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~-l~v~~~~~~~~~ 122 (332)
....+++++++|+.+++.. ++.|+.++..+ ++. . .+.... ....+..++++++ |+ |+++..... .
T Consensus 42 ~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~-----~--~~~~~~--~~~~~~~~~~spd-g~~l~~~~~~~~--~ 108 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP-----E--KVDTGF--ATICNNDHGISPD-GALYAISDKVEF--G 108 (297)
T ss_dssp SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC-----E--ECCCTT--CCCBCSCCEECTT-SSEEEEEECTTT--S
T ss_pred cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc-----e--Eecccc--ccccccceEECCC-CCEEEEEEeCCC--C
Confidence 3567899999999776654 78999999887 652 1 222111 1125678899997 55 444432111 2
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCC--eEEEEcCCCceEEEecCCCCCCcccccC
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGS--KIWKVGVKGEFLSIISSPLFTPKEWYKN 199 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~--~I~~v~~~g~~~~~~~~~~~~~p~~~~~ 199 (332)
...|+.++.++++.. .+.. ....+.+++.|+|+ ++++....+ .||.++.++.....+.. .
T Consensus 109 ~~~l~~~~~~~~~~~---~~~~----~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~ 171 (297)
T 2ojh_A 109 KSAIYLLPSTGGTPR---LMTK----NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH----------G 171 (297)
T ss_dssp SCEEEEEETTCCCCE---ECCS----SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC----------S
T ss_pred cceEEEEECCCCceE---Eeec----CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc----------C
Confidence 457888998776643 2211 12367789999986 665654444 68888776443322211 1
Q ss_pred ccccCeEEEccCc-eEEEEeC--CCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEE
Q 020019 200 LVGLNGIVYHPDG-FLIVIHT--FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVA 266 (332)
Q Consensus 200 ~~~~nGi~~~~dG-~Lyva~~--~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va 266 (332)
......++++||| .|+++.. ...+||.++..++ ....+.. .......++++++|+.++.
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~-----~~~~~~~---~~~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS-----SVERITD---SAYGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-----CEEECCC---CSEEEEEEEECTTSSEEEE
T ss_pred CCccccceECCCCCEEEEEecCCCCccEEEECCCCC-----CcEEEec---CCcccCCeEECCCCCEEEE
Confidence 1235789999999 7777653 4557888887654 3332321 1123456888999874443
No 144
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.75 E-value=1.1e-06 Score=81.39 Aligned_cols=201 Identities=10% Similarity=0.069 Sum_probs=121.7
Q ss_pred cccceEEcCCCCEEEE-E-ecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 46 FRECAKWDDSGRRFIV-S-FLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 46 ~pegia~d~~g~~~~~-~-~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
+...++++|||+++++ + ..++.|..+|..+++. . ..+... ..+..+++.|+ |+++++..+
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~----~---~~~~~~----~~V~~v~fspd-g~~l~s~s~------ 196 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE----K---FEIETR----GEVKDLHFSTD-GKVVAYITG------ 196 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE----E---EEEECS----SCCCEEEECTT-SSEEEEECS------
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE----E---EEeCCC----CceEEEEEccC-CceEEeccc------
Confidence 3456899999997754 3 4578999999887652 1 122111 24789999997 876665542
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCC----eEEEEcCCCceEEEecCCCCCCcccccC
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGS----KIWKVGVKGEFLSIISSPLFTPKEWYKN 199 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~----~I~~v~~~g~~~~~~~~~~~~~p~~~~~ 199 (332)
..+.+|+..+++........ ......+.+++.|+|+.+++-+..+ .++.++.............+. ..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~---~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~ 268 (365)
T 4h5i_A 197 SSLEVISTVTGSCIARKTDF---DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT-----NR 268 (365)
T ss_dssp SCEEEEETTTCCEEEEECCC---CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE-----SS
T ss_pred eeEEEEEeccCcceeeeecC---CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeec-----CC
Confidence 35677888877765433321 1124567899999998666543322 355555432111110000000 01
Q ss_pred ccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEEEcC
Q 020019 200 LVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLVESS 277 (332)
Q Consensus 200 ~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~~ 277 (332)
....+.++|+|||.+.++-...+.|..+|..++ +.+..+. . ........+++.|||+++++.. ..+++...+
T Consensus 269 ~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~----~~~~~~~-~-gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 269 FKGITSMDVDMKGELAVLASNDNSIALVKLKDL----SMSKIFK-Q-AHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp CSCEEEEEECTTSCEEEEEETTSCEEEEETTTT----EEEEEET-T-SSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CCCeEeEEECCCCCceEEEcCCCEEEEEECCCC----cEEEEec-C-cccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 234578999999966666667788988999877 2343332 2 1334567999999999888863 334444444
Q ss_pred C
Q 020019 278 D 278 (332)
Q Consensus 278 d 278 (332)
.
T Consensus 343 ~ 343 (365)
T 4h5i_A 343 L 343 (365)
T ss_dssp T
T ss_pred C
Confidence 3
No 145
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.75 E-value=2.3e-06 Score=86.88 Aligned_cols=233 Identities=14% Similarity=0.121 Sum_probs=130.8
Q ss_pred ccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccC-cCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 47 RECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLE-LTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 47 pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
...+..|.+|++|++. .+.|.++++.+++. .......... ...+....|..|.+ |+||++... +.
T Consensus 375 v~~i~~d~~g~lWigt--~~GL~~~~~~~~~~-----~~~~~~~~~~~~~~~~v~~i~~d~~-g~lWigT~~------~G 440 (758)
T 3ott_A 375 IRHIYEDKEQQLWIAT--DGSINRYDYATRQF-----IHYNIVDNTGTYNTNWTYYIFEDTA-GQLWISTCL------GG 440 (758)
T ss_dssp EEEEEECTTSCEEEEE--TTEEEEEETTTTEE-----EEEEEECCC--CBSSSEEEEEECTT-SEEEEEESS------SC
T ss_pred eEEEEECCCCCEEEEe--CCcHhhcCcCCCcE-----EEeecCCCcCCCCCceEEEEEEcCC-CCEEEEECC------Cc
Confidence 3457789999999987 36899999876652 1111111111 11234678888886 999999752 35
Q ss_pred EEEEECCC------CcEE--EEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccc
Q 020019 126 VAAYDLST------WNRL--FLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWY 197 (332)
Q Consensus 126 l~~~d~~~------g~~~--~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~ 197 (332)
|.+||.++ +... ...... ..........+..|++|+||+.....+.|++++++......+......
T Consensus 441 l~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~----- 514 (758)
T 3ott_A 441 IFVVDKHKLMQSTSGQYIAEQNYSVH-NGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELT----- 514 (758)
T ss_dssp EEEEEHHHHHHCCSSEEECSEEECGG-GTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSC-----
T ss_pred eEEEccccccccCCcceecccccccc-cccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcC-----
Confidence 88888653 1121 111111 011123467799999999999333346799999874433222111111
Q ss_pred cCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCceEEEEcC
Q 020019 198 KNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSARLVESS 277 (332)
Q Consensus 198 ~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~~~v~~~ 277 (332)
....++.|..+.+|.||++.. . -|+++++++.+ .+.+...+-+.....+|..+ +|+||++.+.+...+...
T Consensus 515 -~~~~~~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~-----~~~~~~~gl~~~~i~~i~~~-~g~lWi~t~~Gl~~~~~~ 585 (758)
T 3ott_A 515 -GEKSPNYLLCDEDGLLWVGFH-G-GVMRINPKDES-----QQSISFGSFSNNEILSMTCV-KNSIWVSTTNGLWIIDRK 585 (758)
T ss_dssp -GGGCEEEEEECTTSCEEEEET-T-EEEEECC--CC-----CCBCCCCC---CCEEEEEEE-TTEEEEEESSCEEEEETT
T ss_pred -CCcccceEEECCCCCEEEEec-C-ceEEEecCCCc-----eEEecccCCCccceEEEEEC-CCCEEEECCCCeEEEcCC
Confidence 123467899999999999964 3 49999988663 22221111111335567665 799999987765444443
Q ss_pred CCceEEEEEeeecCCCcccceEEEE--ECCeEEEEEecC
Q 020019 278 DGWETAAVVAKFSGPVHRLATAATV--KDGRVYLNHMLG 314 (332)
Q Consensus 278 dg~~~~~~~~~~~~~~~~~pt~va~--~~g~lyv~~~~g 314 (332)
.. +.. .. .+.. ..+. ..+. .+|+||+...-|
T Consensus 586 ~~-~~~-~~-~~~~--~~~~-~~~~~~~~G~l~fG~~~G 618 (758)
T 3ott_A 586 TM-DAR-QQ-NMTN--KRFT-SLLFDPKEDCVYLGGADG 618 (758)
T ss_dssp TC-CEE-EC---CC--CCCS-EEEEETTTTEEEEECBSE
T ss_pred Cc-eeE-Ee-cCCC--Ccee-eeEEECCCCcEEEecCCc
Confidence 33 221 11 1111 1222 3333 588999854444
No 146
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.74 E-value=1.5e-05 Score=77.39 Aligned_cols=193 Identities=11% Similarity=0.091 Sum_probs=124.7
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
...++++.++++.+++...++.|..++..+... . .+. .. ...+.++++.++ ++.+++... .+.
T Consensus 305 ~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~-----~--~~~-~~---~~~v~~~~~s~~-g~~l~~~~~-----dg~ 367 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQHL-----Q--TLT-GH---SSSVWGVAFSPD-GQTIASASD-----DKT 367 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEE-----E--EEC-CC---SSCEEEEEECTT-SSEEEEEET-----TSE
T ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCee-----E--EEe-CC---CCCEEEEEECCC-CCEEEEEeC-----CCE
Confidence 445789999999888777789999998764321 1 221 11 125678999997 665544332 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCe
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNG 205 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nG 205 (332)
+..||.. ++......- .......+++.|+|+.+++-+..+.|..++.+++....+... .....+
T Consensus 368 v~~~~~~-~~~~~~~~~-----~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~----------~~~v~~ 431 (577)
T 2ymu_A 368 VKLWNRN-GQLLQTLTG-----HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH----------SSSVWG 431 (577)
T ss_dssp EEEEETT-CCEEEEEEC-----CSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECC----------SSCEEE
T ss_pred EEEEcCC-CCEEEEecC-----CCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCC----------CCCeEE
Confidence 8889964 555433321 124567899999998888777788999999887755433211 123568
Q ss_pred EEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC-CceEEEEcCCC
Q 020019 206 IVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN-PSARLVESSDG 279 (332)
Q Consensus 206 i~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~-~~~~~v~~~dg 279 (332)
++++||+.+.++-...+.|..++.... .+..+.. .......+++.++|+++++.. .....+...++
T Consensus 432 ~~~s~d~~~l~~~~~d~~v~~w~~~~~-----~~~~~~~---~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~ 498 (577)
T 2ymu_A 432 VAFSPDDQTIASASDDKTVKLWNRNGQ-----LLQTLTG---HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 498 (577)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTSC-----EEEEEEC---CSSCEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCCC-----EEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC
Confidence 999999955555566778887886533 3443432 224556899999999887753 33233344566
No 147
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.73 E-value=4.3e-06 Score=77.70 Aligned_cols=206 Identities=12% Similarity=0.054 Sum_probs=131.2
Q ss_pred CccccceEEcCCC-CEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 44 SFFRECAKWDDSG-RRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 44 ~~~pegia~d~~g-~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
......+++++++ +++++...++.|..+|..+++. .. .+. ... -......++++++ +.++++.. .
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~----~~--~~~-~~~-~~~~v~~~~~~~~-~~~l~~~~-----~ 196 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA----VL--TLG-PDV-HPDTIYSVDWSRD-GALICTSC-----R 196 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE----EE--EEC-TTT-CCSCEEEEEECTT-SSCEEEEE-----T
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc----cE--EEe-cCC-CCCceEEEEECCC-CCEEEEEe-----c
Confidence 3355679999998 5777777789999999876652 11 221 011 1125789999996 65444433 1
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEe---CCCCeEEEEcCCC-ce-EEEecCCCCCCcccc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTD---VTGSKIWKVGVKG-EF-LSIISSPLFTPKEWY 197 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd---~~~~~I~~v~~~g-~~-~~~~~~~~~~~p~~~ 197 (332)
.+.|.+||+++++........ . ....+..+++.++|+++++- ...+.|..+|... +. .......
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-------- 265 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRP--H-EGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD-------- 265 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECS--S-CSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC--------
T ss_pred CCcEEEEeCCCCceeeeeccC--C-CCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEecc--------
Confidence 457999999988876554221 1 12357889999999877776 5778888888763 21 1111110
Q ss_pred cCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCceEEEEc
Q 020019 198 KNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSARLVES 276 (332)
Q Consensus 198 ~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~~~v~~ 276 (332)
.......+++++|| .||++....+.|..++..+++. .+..+... .......++++.++|.+.++.....++...
T Consensus 266 -~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~---~~~~l~~~-~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l 340 (402)
T 2aq5_A 266 -TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP---FLHYLSMF-SSKESQRGMGYMPKRGLEVNKCEIARFYKL 340 (402)
T ss_dssp -CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT---CEEEEEEE-CCSSCCSEEEECCGGGSCGGGTEEEEEEEE
T ss_pred -CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc---ceEeeccc-ccCCcccceEEecccccceecceeEEEEEc
Confidence 12346789999999 8888887788898888886631 13333322 122456899999998877765444444343
Q ss_pred CCC
Q 020019 277 SDG 279 (332)
Q Consensus 277 ~dg 279 (332)
.++
T Consensus 341 ~~~ 343 (402)
T 2aq5_A 341 HER 343 (402)
T ss_dssp ETT
T ss_pred CCC
Confidence 444
No 148
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.71 E-value=5e-06 Score=84.39 Aligned_cols=235 Identities=12% Similarity=0.100 Sum_probs=135.0
Q ss_pred cceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecc----cCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 48 ECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKD----LELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 48 egia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~----~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
..+..|++|++|++. .+.|+++++.+++.. . ..+... ..+..+.+..|..|.+ |+||++..
T Consensus 327 ~~i~~D~~g~lWiGt--~~Gl~~~~~~~~~~~----~-~~~~~~~~~~~~l~~~~v~~i~~d~~-g~lWigt~------- 391 (758)
T 3ott_A 327 YSLFRDSKGFYWFGG--ANGLIRFTDPAGERH----D-AIWYRMGDKTYPLSHNRIRHIYEDKE-QQLWIATD------- 391 (758)
T ss_dssp EEEEECTTCCEEEEE--TTEEEEESCTTSSCC----C-CEEECTTCSSSCCSCSCEEEEEECTT-SCEEEEET-------
T ss_pred EEEEEcCCCCEEEee--CCcceeecccccccc----e-eEEeccCCcCCCCCCCceEEEEECCC-CCEEEEeC-------
Confidence 456778999999886 356889987654210 0 112211 1122235678888886 99999873
Q ss_pred ceEEEEECCCCcEEEEEecCCCCC-CCCCccceEECCCCcEEEEeCCCCeEEEEcCCC------c-eE--EEec-CCCCC
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSD-GKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG------E-FL--SIIS-SPLFT 192 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~-~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g------~-~~--~~~~-~~~~~ 192 (332)
+.|.+||+++++............ .......+..|++|+||++... +.|++++++. + .. .... ...+
T Consensus 392 ~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 469 (758)
T 3ott_A 392 GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCL-GGIFVVDKHKLMQSTSGQYIAEQNYSVHNGL- 469 (758)
T ss_dssp TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESS-SCEEEEEHHHHHHCCSSEEECSEEECGGGTC-
T ss_pred CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECC-CceEEEccccccccCCcceeccccccccccc-
Confidence 368999998887654322111000 1134567888999999998653 5688888652 1 11 0010 0001
Q ss_pred CcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCC-CCCCCeEEEeCCCeEEEEeCCce
Q 020019 193 PKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGP-LSFGDGLELLSPTKLVVAGNPSA 271 (332)
Q Consensus 193 ~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~-~~~pdGi~~~~dG~l~va~~~~~ 271 (332)
.......|..+++|.||++....+-|+++++.++ ..+.+...+.. ...+..+..|++|+||++...+.
T Consensus 470 ------~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~-----~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~Gl 538 (758)
T 3ott_A 470 ------SGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTR-----EVTKLFADELTGEKSPNYLLCDEDGLLWVGFHGGV 538 (758)
T ss_dssp ------SCSCEEEEEECTTSCEEEEETTCSSEEEEETTTT-----EEEEECTTTSCGGGCEEEEEECTTSCEEEEETTEE
T ss_pred ------ccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCC-----ceEEecCCCcCCCcccceEEECCCCCEEEEecCce
Confidence 0123567889999999983222345999999876 34444321100 12467888999999999987643
Q ss_pred EEEEcCCCceEEEEE-eeecCCCcccceEEEEECCeEEEEEecC
Q 020019 272 RLVESSDGWETAAVV-AKFSGPVHRLATAATVKDGRVYLNHMLG 314 (332)
Q Consensus 272 ~~v~~~dg~~~~~~~-~~~~~~~~~~pt~va~~~g~lyv~~~~g 314 (332)
. ...+...+..... ..+ + .....++..++|+||++..-|
T Consensus 539 ~-~~~~~~~~~~~~~~~gl--~-~~~i~~i~~~~g~lWi~t~~G 578 (758)
T 3ott_A 539 M-RINPKDESQQSISFGSF--S-NNEILSMTCVKNSIWVSTTNG 578 (758)
T ss_dssp E-EECC--CCCCBCCCCC------CCEEEEEEETTEEEEEESSC
T ss_pred E-EEecCCCceEEecccCC--C-ccceEEEEECCCCEEEECCCC
Confidence 3 3333321111110 011 1 123345555789999976544
No 149
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.70 E-value=3.5e-06 Score=77.38 Aligned_cols=186 Identities=10% Similarity=0.051 Sum_probs=122.4
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++|+.+++...++.|..+|..+++. .. ++.... .....+++.++...++++... .+.
T Consensus 129 ~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~----~~--~~~~h~----~~V~~~~~~~~~~~~l~s~s~-----D~~ 193 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV----LS--SYRAHA----AQVTCVAASPHKDSVFLSCSE-----DNR 193 (344)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEE----EE--EECCCS----SCEEEEEECSSCTTEEEEEET-----TSC
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE----EE--EEcCcC----CceEEEEecCCCCCceeeecc-----ccc
Confidence 345789999999888888889999999887652 11 222111 256789998874456655432 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-CcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCcccc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGL 203 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~ 203 (332)
|..||.++++....+... . .....+.+++.++ ++++++-+..+.|..+|.. ++....+.. .....
T Consensus 194 v~iwd~~~~~~~~~~~~~--~-~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~----------h~~~v 260 (344)
T 4gqb_B 194 ILLWDTRCPKPASQIGCS--A-PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV----------HSQCV 260 (344)
T ss_dssp EEEEETTSSSCEEECC-------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC----------CSSCE
T ss_pred cccccccccceeeeeecc--e-eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC----------CCCCE
Confidence 889999988876543321 1 1245678999986 5788887788889888875 443322211 11235
Q ss_pred CeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEe
Q 020019 204 NGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAG 267 (332)
Q Consensus 204 nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~ 267 (332)
+.|+|+||| .+.++-...++|..+|..++ ... ...+ +......+++.|+|. |+++.
T Consensus 261 ~~v~fsp~g~~~lasgs~D~~i~vwd~~~~-----~~~--~~~~-H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 261 TGLVFSPHSVPFLASLSEDCSLAVLDSSLS-----ELF--RSQA-HRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTCC-----EEE--EECC-CSSCEEEEEECSSSTTEEEEE
T ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCC-----cEE--EEcC-CCCCEEEEEEeCCCCeEEEEE
Confidence 789999998 67777777888988888866 232 2332 334567899998875 66553
No 150
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.70 E-value=3.5e-05 Score=69.51 Aligned_cols=194 Identities=13% Similarity=0.093 Sum_probs=121.7
Q ss_pred CccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 44 SFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
......++++++++.+++...++.|..++..+++. .. .+. .. ..+..+.++++ ++.+++.........
T Consensus 74 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~~--~~~-~~----~~v~~~~~~~~-~~~l~~~~~~~~~~~ 141 (369)
T 3zwl_B 74 TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQC----VA--TWK-SP----VPVKRVEFSPC-GNYFLAILDNVMKNP 141 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE----EE--EEE-CS----SCEEEEEECTT-SSEEEEEECCBTTBC
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EE--Eee-cC----CCeEEEEEccC-CCEEEEecCCccCCC
Confidence 33556789999999888877789999999887652 11 222 11 25788999997 655554432100012
Q ss_pred ceEEEEECCCCcEEEEEe-cCC-C------CCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCC--ceEEEecCCCCCC
Q 020019 124 SAVAAYDLSTWNRLFLTQ-LSG-P------SDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG--EFLSIISSPLFTP 193 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~-l~~-~------~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g--~~~~~~~~~~~~~ 193 (332)
+.+..||.+.++...... ... + .........++++++|+.+++-...+.|..++... +....+...
T Consensus 142 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---- 217 (369)
T 3zwl_B 142 GSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH---- 217 (369)
T ss_dssp CEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECC----
T ss_pred CEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecC----
Confidence 568888876543211110 000 0 11123677899999998777777789999998764 333322211
Q ss_pred cccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 194 KEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 194 p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
......++++++|.++++-...+.|..+++.+++ .+..+... .....+++.++|+.+++.
T Consensus 218 ------~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~----~~~~~~~~----~~~~~~~~~~~~~~l~~~ 277 (369)
T 3zwl_B 218 ------EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ----VLKKYETD----CPLNTAVITPLKEFIILG 277 (369)
T ss_dssp ------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEEECS----SCEEEEEECSSSSEEEEE
T ss_pred ------CCceeEEEECCCCCEEEEecCCceEEEEECCCCc----eeeeecCC----CCceeEEecCCCceEEEe
Confidence 1235789999999444455567889999998762 44444422 345678899988866664
No 151
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.68 E-value=8.4e-06 Score=75.17 Aligned_cols=186 Identities=8% Similarity=-0.007 Sum_probs=123.3
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcC------------CCccceEEEeCCCCeEE
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELT------------GNGSLGLVLDHPRNRLL 112 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~gi~vd~~~g~l~ 112 (332)
.....++++++++.+++...++.|..++..+++. .. .+. ..... +.....+.+.++ +.++
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 221 (425)
T 1r5m_A 150 APIVSVKWNKDGTHIISMDVENVTILWNVISGTV----MQ--HFE-LKETGGSSINAENHSGDGSLGVDVEWVDD-DKFV 221 (425)
T ss_dssp SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE----EE--EEC-CC---------------CCCBSCCEEEET-TEEE
T ss_pred ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE----EE--Eee-ccccCccceeeccccCCcceeeEEEEcCC-CEEE
Confidence 3556799999999888777789999999876652 11 121 11100 001678888885 7766
Q ss_pred EEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCC
Q 020019 113 VVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLF 191 (332)
Q Consensus 113 v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~ 191 (332)
++.. .+.+..||.++++....... .......+++.++|+.+++-...+.|..++.. ++....+..
T Consensus 222 ~~~~------~g~i~~~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--- 287 (425)
T 1r5m_A 222 IPGP------KGAIFVYQITEKTPTGKLIG-----HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG--- 287 (425)
T ss_dssp EECG------GGCEEEEETTCSSCSEEECC-----CSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC---
T ss_pred EEcC------CCeEEEEEcCCCceeeeecc-----CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecC---
Confidence 6543 46799999998776543321 12456789999999888887788889888865 333222211
Q ss_pred CCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 192 TPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 192 ~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
.......++++++| ++++-...+.|..+++.++ +.+..+... ......+++.++|+++++.
T Consensus 288 -------~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~----~~~~~~~~~---~~~i~~~~~s~~~~~l~~~ 348 (425)
T 1r5m_A 288 -------HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN----TLLALSIVD---GVPIFAGRISQDGQKYAVA 348 (425)
T ss_dssp -------CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT----EEEEEEECT---TCCEEEEEECTTSSEEEEE
T ss_pred -------CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC----cEeEecccC---CccEEEEEEcCCCCEEEEE
Confidence 11245789999999 6666667889999999876 234434322 2356688999998877764
No 152
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.68 E-value=1.4e-06 Score=80.24 Aligned_cols=205 Identities=13% Similarity=0.151 Sum_probs=119.6
Q ss_pred cccceEEcCCCCEEEEEe------cCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 46 FRECAKWDDSGRRFIVSF------LDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~------~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
....++|+|||+++++.. +++.|+.++..++... . .+......-..+...+++.++ ++++++..+
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~----~--~~~~~~~~~~~~V~~~~~s~d-~~~l~~s~d-- 114 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN----E--SLCTAGVQTEAGVTDVAWVSE-KGILVASDS-- 114 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---C----G--GGCSEEEECSSCEEEEEEETT-TEEEEEETT--
T ss_pred CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcc----e--eEecccCCCCCCEEEEEEcCC-CCEEEEECC--
Confidence 456799999999888763 3678888876655421 1 111000000125788999997 887776543
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCccccc
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~ 198 (332)
+.|.+||..+++......+.. .......+.+++.|+|+.+++-+..+.|..+|.. ++....+...
T Consensus 115 ----g~v~lWd~~~~~~~~~~~~~~-~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h--------- 180 (357)
T 4g56_B 115 ----GAVELWEILEKESLLVNKFAK-YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAH--------- 180 (357)
T ss_dssp ----SCEEEC--------CCCCEEE-CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCC---------
T ss_pred ----CEEEEeeccccceeEEEeecc-CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC---------
Confidence 468889998776432211110 0112456789999999988888888889888876 4443333211
Q ss_pred CccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCC-CeEEEEe--CCceEEE
Q 020019 199 NLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSP-TKLVVAG--NPSARLV 274 (332)
Q Consensus 199 ~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~d-G~l~va~--~~~~~~v 274 (332)
....+.+++++++ .++++-...++|..+|+.+++ ....+... .....+..+++.|+ +.++++. ...+++.
T Consensus 181 -~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~----~~~~~~~~-~~~~~v~~v~~sp~~~~~la~g~~d~~i~~w 254 (357)
T 4g56_B 181 -SSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK----PATRIDFC-ASDTIPTSVTWHPEKDDTFACGDETGNVSLV 254 (357)
T ss_dssp -SSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS----CBCBCCCT-TCCSCEEEEEECTTSTTEEEEEESSSCEEEE
T ss_pred -CCCEEEEEEccCCCceeeeeccCCceEEEECCCCc----eeeeeeec-cccccccchhhhhcccceEEEeecccceeEE
Confidence 1235789999998 677777778889888888663 22222222 12234567888876 4566553 2334544
Q ss_pred EcCCC
Q 020019 275 ESSDG 279 (332)
Q Consensus 275 ~~~dg 279 (332)
...++
T Consensus 255 d~~~~ 259 (357)
T 4g56_B 255 NIKNP 259 (357)
T ss_dssp ESSCG
T ss_pred ECCCC
Confidence 55554
No 153
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.66 E-value=6.3e-05 Score=67.75 Aligned_cols=183 Identities=10% Similarity=0.115 Sum_probs=117.3
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....+++.++|+.+++...++.|..+|..+++. .. .+.... .....+.++++ +.++++... .+.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~----~~--~~~~h~----~~v~~~~~~~~-~~~l~s~s~-----D~~ 130 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGET----YQ--RFVGHK----SDVMSVDIDKK-ASMIISGSR-----DKT 130 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----EE--EEECCS----SCEEEEEECTT-SCEEEEEET-----TSC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCe----eE--EEccCC----CcEEEEEEcCC-CCEEEEEeC-----CCe
Confidence 445689999999888888899999999887652 11 232111 25688999996 665555432 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECC------CCcEEEEeCCCCeEEEEcCCC-ceEEEecCCCCCCccccc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA------EGNAYVTDVTGSKIWKVGVKG-EFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~------dG~lyvtd~~~~~I~~v~~~g-~~~~~~~~~~~~~p~~~~ 198 (332)
+.+||.+..... .+.+. ......+++.| ++..+++-+..+.|...+... +....+..
T Consensus 131 i~vwd~~~~~~~---~~~~h---~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~---------- 194 (319)
T 3frx_A 131 IKVWTIKGQCLA---TLLGH---NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG---------- 194 (319)
T ss_dssp EEEEETTSCEEE---EECCC---SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECC----------
T ss_pred EEEEECCCCeEE---EEecc---CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecC----------
Confidence 888999753332 22111 23345566665 344677777788888888653 32221111
Q ss_pred CccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC
Q 020019 199 NLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN 268 (332)
Q Consensus 199 ~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~ 268 (332)
.....+.++++|+|.++++-...+.|..+|+.++ +.+..+... .....+++.++|.++++..
T Consensus 195 h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~----~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK----KAMYTLSAQ----DEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT----EEEEEEECC----SCEEEEEECSSSSEEEEEE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----cEEEEecCC----CcEEEEEEcCCCCEEEEEc
Confidence 1124578999999966666667888999998876 234444322 3456899999988777753
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.66 E-value=5.2e-06 Score=76.32 Aligned_cols=187 Identities=11% Similarity=-0.002 Sum_probs=108.0
Q ss_pred ceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC---------
Q 020019 49 CAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF--------- 119 (332)
Q Consensus 49 gia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~--------- 119 (332)
+++++|+|+.++....++.|++++..+++. ..+...+... .......++++ ++++++.....
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~-------~~~~~~~~~~-~~~~~~~~~~d-g~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEE-------NVVYQVPAEW-VGYGTWVANSD-CTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCE-------EEEEECCTTE-EEEEEEEECTT-SSEEEEEEEEGGGCCCCCSH
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcc-------eeeeechhhc-ccccceeECCC-CCeeccccccCccccccccc
Confidence 679999998776665567999999987762 1233222210 01122334675 77665432100
Q ss_pred --------CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECC-CCc-EE-EEeCC----CCeEEEEcCCCceEE
Q 020019 120 --------GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGN-AY-VTDVT----GSKIWKVGVKGEFLS 184 (332)
Q Consensus 120 --------~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~-ly-vtd~~----~~~I~~v~~~g~~~~ 184 (332)
......|+.+|+++++....... ....+++++.| ||+ |+ +.+.. ...|+.++.+++..+
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~ 229 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGESTVILQE------NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR 229 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCCEEEEEEE------SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE
T ss_pred chhhhhhccCCcceEEEEECCCCceEEeecC------CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE
Confidence 01235799999999887654432 23457899999 885 54 44322 458999998765333
Q ss_pred EecCCCCCCcccccCccccCeEEEccCc-eE-EEEeCCCC---eEEEEeCCCCCCccceeEEE-EecC--CCCCCCCeEE
Q 020019 185 IISSPLFTPKEWYKNLVGLNGIVYHPDG-FL-IVIHTFSG---NLFKIDIVDGVGEGEEIKLI-RVAG--GPLSFGDGLE 256 (332)
Q Consensus 185 ~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~L-yva~~~~~---~i~~id~~~~~~~~~~~~~v-~~~g--~~~~~pdGi~ 256 (332)
.+..... .......+|+||| .| |+++.... .|+.+++.+++ .+.+ ..++ .....+++++
T Consensus 230 ~l~~~~~--------~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~-----~~~l~~~~~~~~~~~~~~~~~ 296 (388)
T 3pe7_A 230 KVKTHAE--------GESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE-----NRQLTSMPACSHLMSNYDGSL 296 (388)
T ss_dssp ESCCCCT--------TEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC-----EEEEEEECCEEEEEECTTSSE
T ss_pred EeeeCCC--------CcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCc-----eEEEEcCCCceeeeecCCCCe
Confidence 2211100 0123467899999 67 55554333 39999999873 2222 2221 0012367788
Q ss_pred EeCCCeE
Q 020019 257 LLSPTKL 263 (332)
Q Consensus 257 ~~~dG~l 263 (332)
+.+||+.
T Consensus 297 ~spdg~~ 303 (388)
T 3pe7_A 297 MVGDGSD 303 (388)
T ss_dssp EEEEECC
T ss_pred EccCCCc
Confidence 8888763
No 155
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.66 E-value=8.8e-05 Score=67.90 Aligned_cols=231 Identities=13% Similarity=0.130 Sum_probs=136.8
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++|+|+.+++...++.+..++...............+.... .....+.+.++...|+.+.. .+.
T Consensus 108 ~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~t~s~------D~~ 177 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHT----NYLSACSFTNSDMQILTASG------DGT 177 (354)
T ss_dssp CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECS----SCEEEEEECSSSSEEEEEET------TSE
T ss_pred CEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccC----CcEEEEEEeCCCCEEEEEeC------CCc
Confidence 45678999999988877778888777754332100000000111111 24578889887344554443 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECC--CCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA--EGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~--dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
+..||.++++....+.- . ......+++.+ +|+.+++-+..+.|..+|.. ++....+.. ....
T Consensus 178 v~lwd~~~~~~~~~~~~--h---~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~----------h~~~ 242 (354)
T 2pbi_B 178 CALWDVESGQLLQSFHG--H---GADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET----------HESD 242 (354)
T ss_dssp EEEEETTTCCEEEEEEC--C---SSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC----------CSSC
T ss_pred EEEEeCCCCeEEEEEcC--C---CCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC----------CCCC
Confidence 88999999887654432 1 23345566765 57888888888999998865 454333321 1124
Q ss_pred cCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEEEcCCCc
Q 020019 203 LNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLVESSDGW 280 (332)
Q Consensus 203 ~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~~dg~ 280 (332)
.+.++++|+|.++++-...+.|..+|+..+ ..+..+... ........+++.++|+++++.. ...++.....+.
T Consensus 243 v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~----~~~~~~~~~-~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDATCRLYDLRAD----REVAIYSKE-SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCT-TCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEECCCC----cEEEEEcCC-CcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 578999999966666667788988998865 123323221 1122455788999998887753 334444555662
Q ss_pred eEEEEEeeecCCCcccceEEEE-ECCeEEEEE
Q 020019 281 ETAAVVAKFSGPVHRLATAATV-KDGRVYLNH 311 (332)
Q Consensus 281 ~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~ 311 (332)
.. ..+.+ .-...+++++ .+++++++.
T Consensus 318 ~~----~~l~~-h~~~v~~l~~spdg~~l~sg 344 (354)
T 2pbi_B 318 RV----SILFG-HENRVSTLRVSPDGTAFCSG 344 (354)
T ss_dssp EE----EEECC-CSSCEEEEEECTTSSCEEEE
T ss_pred eE----EEEEC-CCCcEEEEEECCCCCEEEEE
Confidence 22 22221 1233577888 666655543
No 156
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.66 E-value=3.3e-05 Score=72.29 Aligned_cols=162 Identities=12% Similarity=0.084 Sum_probs=111.0
Q ss_pred EecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 40 YHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 40 ~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
+.+.......++++|+++++++...++.|..+|..+++. .. ++.... ..+..++++++ +.++++...
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~----~~--~l~~h~----~~V~~v~~~~~-~~~l~sgs~-- 170 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF----ER--TLKGHT----DSVQDISFDHS-GKLLASCSA-- 170 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCC----CE--EECCCS----SCEEEEEECTT-SSEEEEEET--
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EE--EEeccC----CcEEEEEEcCC-CCEEEEEeC--
Confidence 334333556789999999888888899999999887763 11 232111 25788999996 665555432
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCccccc
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~ 198 (332)
.+.+..||.++++... .+.+ .......+++.|+|+.+++-+..+.|..+|.. ++....+...
T Consensus 171 ---D~~i~iwd~~~~~~~~--~~~~---h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h--------- 233 (410)
T 1vyh_C 171 ---DMTIKLWDFQGFECIR--TMHG---HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH--------- 233 (410)
T ss_dssp ---TSCCCEEETTSSCEEE--CCCC---CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC---------
T ss_pred ---CCeEEEEeCCCCceeE--EEcC---CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC---------
Confidence 3567889998877643 2321 12457789999999988888888999888865 4433322111
Q ss_pred CccccCeEEEccCceEEEEeCCCCeEEEEeCCCC
Q 020019 199 NLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 199 ~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
....+.++++++|.++++-...+.|..++..++
T Consensus 234 -~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 234 -REWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266 (410)
T ss_dssp -SSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred -CccEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 123467899999976667677888888888765
No 157
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.65 E-value=1.9e-05 Score=72.49 Aligned_cols=209 Identities=11% Similarity=0.061 Sum_probs=133.9
Q ss_pred ecCCccccceEEcCCC-CEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 41 HSSSFFRECAKWDDSG-RRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 41 ~~~~~~pegia~d~~g-~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
.+.......+++++++ +++++...++.|..++..+++. . ......+ -......+++.++++.++++..
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~--~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~--- 138 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK-----T--SFIQGMG-PGDAITGMKFNQFNTNQLFVSS--- 138 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC-----E--EEECCCS-TTCBEEEEEEETTEEEEEEEEE---
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc-----c--eeeecCC-cCCceeEEEeCCCCCCEEEEEe---
Confidence 3333456789999999 7777777789999999886653 1 2221111 1135789999984355454443
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccC
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKN 199 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~ 199 (332)
..+.+..||.++......... .........+++.++|+.+++-...+.|..++.+++....+...
T Consensus 139 --~d~~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h---------- 203 (383)
T 3ei3_B 139 --IRGATTLRDFSGSVIQVFAKT---DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLH---------- 203 (383)
T ss_dssp --TTTEEEEEETTSCEEEEEECC---CCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECS----------
T ss_pred --CCCEEEEEECCCCceEEEecc---CCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccC----------
Confidence 245788999986443322221 11124578899999999888888889999999887654433211
Q ss_pred ccccCeEEEccCce-EEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC-CCeEEEEeC--CceEEEE
Q 020019 200 LVGLNGIVYHPDGF-LIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS-PTKLVVAGN--PSARLVE 275 (332)
Q Consensus 200 ~~~~nGi~~~~dG~-Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~~--~~~~~v~ 275 (332)
......++++|++. ++++-...+.|..+++.+.+.....+..+. .......+++.+ +|+++++.. ...++..
T Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd 279 (383)
T 3ei3_B 204 KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP----HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYS 279 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE----CSSCEEEEEECTTTSCEEEEEESSSEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec----CCCceEEEEEcCCCCCEEEEEcCCCcEEEEE
Confidence 12457899999994 777777888998899886322112333332 224567899999 888777653 3334334
Q ss_pred cCCC
Q 020019 276 SSDG 279 (332)
Q Consensus 276 ~~dg 279 (332)
..++
T Consensus 280 ~~~~ 283 (383)
T 3ei3_B 280 SYDW 283 (383)
T ss_dssp TTBT
T ss_pred CCCC
Confidence 4444
No 158
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.65 E-value=3.8e-05 Score=71.23 Aligned_cols=209 Identities=13% Similarity=0.041 Sum_probs=129.6
Q ss_pred cccceEEcC-CCCEEEEEecCCeEEEEECCCCCCCcccee-eeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 46 FRECAKWDD-SGRRFIVSFLDGGIGQVAVPDDYPPGTVLE-EVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 46 ~pegia~d~-~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
....+++++ +++++++...++.|..++..++.......+ ...+.... ..+..++++++..+++++... .
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~p~~~~~l~s~~~-----d 153 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT----KRVGIVAWHPTAQNVLLSAGC-----D 153 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS----SCEEEEEECSSBTTEEEEEET-----T
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC----CeEEEEEECcCCCCEEEEEcC-----C
Confidence 345689999 888888877789999999876532000000 00222111 257889999973244544332 3
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
+.|.+||.++++....+.... .......+++.++|+.+++-+..+.|..+|.. ++....+.... ....
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------~~~~ 222 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDV---HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPH--------EGTR 222 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTT---CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSS--------CSSS
T ss_pred CEEEEEECCCCCccEEEecCC---CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCC--------CCCc
Confidence 568999999887765442111 13467889999999888777788999999976 44433321110 1123
Q ss_pred cCeEEEccCceEEEEe---CCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEE-EEeC--CceEEEEc
Q 020019 203 LNGIVYHPDGFLIVIH---TFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLV-VAGN--PSARLVES 276 (332)
Q Consensus 203 ~nGi~~~~dG~Lyva~---~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~-va~~--~~~~~v~~ 276 (332)
...++++++|.++++- ...+.|..+++.+.+. ........ .......++++++|+.+ ++.. +..++...
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~---~~~~~~~~--~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~ 297 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE---PLSLQELD--TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEI 297 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS---CSEEEECC--CCSSCEEEEEETTTTEEEEEETTCSCEEEEEE
T ss_pred ceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC---CceEEecc--CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEe
Confidence 5789999999655555 5678899999886531 23333332 22456788999997755 5552 33454455
Q ss_pred CCC
Q 020019 277 SDG 279 (332)
Q Consensus 277 ~dg 279 (332)
.++
T Consensus 298 ~~~ 300 (402)
T 2aq5_A 298 TSE 300 (402)
T ss_dssp CSS
T ss_pred cCC
Confidence 555
No 159
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.64 E-value=2.4e-05 Score=71.76 Aligned_cols=188 Identities=13% Similarity=0.142 Sum_probs=124.3
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCC-CCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHP-RNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~-~g~l~v~~~~~~~~~~~ 124 (332)
....+++.++++.+++...++.|..+|..+++. .. ++.... .....+.+.++ ++.++++... .+
T Consensus 156 ~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~----~~--~~~~h~----~~v~~~~~~~~~~g~~l~sgs~-----Dg 220 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTASGDGTCALWDVESGQL----LQ--SFHGHG----ADVLCLDLAPSETGNTFVSGGC-----DK 220 (354)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCE----EE--EEECCS----SCEEEEEECCCSSCCEEEEEET-----TS
T ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeE----EE--EEcCCC----CCeEEEEEEeCCCCCEEEEEeC-----CC
Confidence 345788999998888877889999999887652 12 232111 14566777663 2454444332 35
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCC-ceEEEecCCCCCCcccccCcccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG-EFLSIISSPLFTPKEWYKNLVGL 203 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g-~~~~~~~~~~~~~p~~~~~~~~~ 203 (332)
.+..||.++++....... .....+.+++.|+|+.+++-+..+.|..+|... +....+.... .....
T Consensus 221 ~v~~wd~~~~~~~~~~~~-----h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~--------~~~~~ 287 (354)
T 2pbi_B 221 KAMVWDMRSGQCVQAFET-----HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES--------IIFGA 287 (354)
T ss_dssp CEEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT--------CCSCE
T ss_pred eEEEEECCCCcEEEEecC-----CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC--------cccce
Confidence 689999999887654332 124577899999999888888888888888653 3333222111 11345
Q ss_pred CeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC
Q 020019 204 NGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN 268 (332)
Q Consensus 204 nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~ 268 (332)
..++|+++|.+.++-...+.|..++..+++ .+..+. + .......+++.+||+++++..
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~----~~~~l~--~-h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKGS----RVSILF--G-HENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCS----EEEEEC--C-CSSCEEEEEECTTSSCEEEEE
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCCc----eEEEEE--C-CCCcEEEEEECCCCCEEEEEc
Confidence 689999999555555677889989987662 343332 1 334567899999998777753
No 160
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.64 E-value=3.8e-05 Score=70.38 Aligned_cols=223 Identities=11% Similarity=0.059 Sum_probs=134.0
Q ss_pred cceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCC-CccceEEEeCCCCeEEEEEeCcCCCccceE
Q 020019 48 ECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTG-NGSLGLVLDHPRNRLLVVAADVFGNKYSAV 126 (332)
Q Consensus 48 egia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l 126 (332)
..++|.+++. +++...+|.|..+|..+++.. ...... ...+ .....+++.++ |+++++... .+.|
T Consensus 86 ~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~----~~~~~~---~~~H~~~V~~v~~spd-g~~l~sgs~-----d~~i 151 (344)
T 4gqb_B 86 ADLTWVGERG-ILVASDSGAVELWELDENETL----IVSKFC---KYEHDDIVSTVSVLSS-GTQAVSGSK-----DICI 151 (344)
T ss_dssp EEEEEETTTE-EEEEETTSEEEEEEECTTSSC----EEEEEE---EECCSSCEEEEEECTT-SSEEEEEET-----TSCE
T ss_pred EEEEEeCCCe-EEEEECCCEEEEEeccCCCce----eEeecc---ccCCCCCEEEEEECCC-CCEEEEEeC-----CCeE
Confidence 4578999865 445566899999998776631 100111 0111 25689999997 765554432 3568
Q ss_pred EEEECCCCcEEEEEecCCCCCCCCCccceEECCCC-cEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccC
Q 020019 127 AAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEG-NAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 127 ~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG-~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
.+||.++++...... +. ....+.+++.+++ +++++-+..+.|...|.. ++....+.... .....+
T Consensus 152 ~iwd~~~~~~~~~~~--~h---~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~--------~~~~~~ 218 (344)
T 4gqb_B 152 KVWDLAQQVVLSSYR--AH---AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA--------PGYLPT 218 (344)
T ss_dssp EEEETTTTEEEEEEC--CC---SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC------------CCCEE
T ss_pred EEEECCCCcEEEEEc--Cc---CCceEEEEecCCCCCceeeeccccccccccccccceeeeeecce--------eeccce
Confidence 899999988765432 11 2456789999987 588888888888888865 44433221110 112356
Q ss_pred eEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCC-eEEEEe-C-CceEEEEcCCCc
Q 020019 205 GIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPT-KLVVAG-N-PSARLVESSDGW 280 (332)
Q Consensus 205 Gi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG-~l~va~-~-~~~~~v~~~dg~ 280 (332)
.+++++++ .++++-..++.|..+|+.+++ .+..+.. .......+++.++| +++++. . ..+++-....+
T Consensus 219 ~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~----~~~~~~~---h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~- 290 (344)
T 4gqb_B 219 SLAWHPQQSEVFVFGDENGTVSLVDTKSTS----CVLSSAV---HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS- 290 (344)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEESCC------CCEEEEC---CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-
T ss_pred eeeecCCCCcceEEeccCCcEEEEECCCCc----EEEEEcC---CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-
Confidence 89999976 787777778889889998763 4444442 22445688999987 455553 2 33443344444
Q ss_pred eEEEEEeeecCCCcccceEEEE-E-CCeEEEE
Q 020019 281 ETAAVVAKFSGPVHRLATAATV-K-DGRVYLN 310 (332)
Q Consensus 281 ~~~~~~~~~~~~~~~~pt~va~-~-~g~lyv~ 310 (332)
++.... .--...++++| . +.+|+++
T Consensus 291 ---~~~~~~--~H~~~V~~v~~sp~~~~llas 317 (344)
T 4gqb_B 291 ---ELFRSQ--AHRDFVRDATWSPLNHSLLTT 317 (344)
T ss_dssp ---EEEEEC--CCSSCEEEEEECSSSTTEEEE
T ss_pred ---cEEEEc--CCCCCEEEEEEeCCCCeEEEE
Confidence 233221 11123467777 3 3456554
No 161
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.64 E-value=3.4e-05 Score=78.00 Aligned_cols=202 Identities=4% Similarity=-0.008 Sum_probs=130.2
Q ss_pred ecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCC
Q 020019 41 HSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG 120 (332)
Q Consensus 41 ~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~ 120 (332)
.+......+++++|+|+++++...+|.|..++..+++. .. .+.... .....++++++ +..+++...
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~----~~--~~~~~~----~~v~~~~~s~~-~~~l~~~~~--- 75 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVE----VR--SIQVTE----TPVRAGKFIAR-KNWIIVGSD--- 75 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE----EE--EEECCS----SCEEEEEEEGG-GTEEEEEET---
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCce----EE--EEecCC----CcEEEEEEeCC-CCEEEEEeC---
Confidence 33334567899999999888777789999999876652 11 222111 25688999997 654444332
Q ss_pred CccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCC--ceEEEecCCCCCCccccc
Q 020019 121 NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG--EFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 121 ~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g--~~~~~~~~~~~~~p~~~~ 198 (332)
.+.|.+||.++++......- .......+++.|+|...++-+..+.|..++.+. +....+...
T Consensus 76 --dg~i~vw~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--------- 139 (814)
T 3mkq_A 76 --DFRIRVFNYNTGEKVVDFEA-----HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGH--------- 139 (814)
T ss_dssp --TSEEEEEETTTCCEEEEEEC-----CSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECC---------
T ss_pred --CCeEEEEECCCCcEEEEEec-----CCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCC---------
Confidence 45799999998887654432 124577899999998777777778888877653 322222111
Q ss_pred CccccCeEEEcc-CceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC--CCeEEEEeC--CceEE
Q 020019 199 NLVGLNGIVYHP-DGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS--PTKLVVAGN--PSARL 273 (332)
Q Consensus 199 ~~~~~nGi~~~~-dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~--dG~l~va~~--~~~~~ 273 (332)
......++|+| ++.++++-...+.|..+++.++. ....+... .......+++.+ +|.++++.. ...++
T Consensus 140 -~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~----~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~ 212 (814)
T 3mkq_A 140 -EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST----PNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDLTIKI 212 (814)
T ss_dssp -SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS----CSEEEECC--CTTCCCEEEECCSTTCCEEEEECTTSEEEE
T ss_pred -CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----ceeEEecC--CCCCEEEEEEEECCCCCEEEEEeCCCEEEE
Confidence 12357899999 77666666678889999987652 33333322 224566788887 777666653 23333
Q ss_pred EEcCCC
Q 020019 274 VESSDG 279 (332)
Q Consensus 274 v~~~dg 279 (332)
....++
T Consensus 213 ~d~~~~ 218 (814)
T 3mkq_A 213 WDYQTK 218 (814)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 344555
No 162
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.64 E-value=0.00014 Score=66.02 Aligned_cols=204 Identities=11% Similarity=0.081 Sum_probs=128.4
Q ss_pred EEecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCc
Q 020019 39 HYHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADV 118 (332)
Q Consensus 39 ~~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~ 118 (332)
.+.+.......++++++++++++...++.|..++..+++. .. .+... ......+++.++ ++++++...
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~----~~--~~~~~----~~~v~~~~~s~~-~~~l~s~~~- 117 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNK----VH--AIPLR----SSWVMTCAYAPS-GNYVACGGL- 117 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE----EE--EEECS----SSCEEEEEECTT-SSEEEEEET-
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCc----ce--EeecC----CccEEEEEECCC-CCEEEEEeC-
Confidence 3444444567899999999888888899999999876652 11 22211 125678999997 665554432
Q ss_pred CCCccceEEEEECCCCc--EEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcc
Q 020019 119 FGNKYSAVAAYDLSTWN--RLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKE 195 (332)
Q Consensus 119 ~~~~~~~l~~~d~~~g~--~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~ 195 (332)
.+.+..||.++++ ......+.+. ......+.+.+++. +++-+..+.|..+|.. ++....+...
T Consensus 118 ----d~~v~iw~~~~~~~~~~~~~~~~~h---~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h------ 183 (340)
T 1got_B 118 ----DNICSIYNLKTREGNVRVSRELAGH---TGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGH------ 183 (340)
T ss_dssp ----TCEEEEEETTTCSBSCEEEEEEECC---SSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCC------
T ss_pred ----CCeEEEEECccCCCcceeEEEecCC---CccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCC------
Confidence 3568889987653 1222233211 24456677777775 5555667888888865 4443322211
Q ss_pred cccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEE
Q 020019 196 WYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARL 273 (332)
Q Consensus 196 ~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~ 273 (332)
......++++|++.++++-...+.|..+|+.++. ....+.. .......+++.|+|+++++.. ...++
T Consensus 184 ----~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~----~~~~~~~---h~~~v~~v~~~p~~~~l~s~s~d~~v~i 252 (340)
T 1got_B 184 ----TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM----CRQTFTG---HESDINAICFFPNGNAFATGSDDATCRL 252 (340)
T ss_dssp ----SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS----EEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ----CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe----eEEEEcC---CcCCEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 1235789999999777777778889889988762 3433331 224567899999988877753 33444
Q ss_pred EEcCCC
Q 020019 274 VESSDG 279 (332)
Q Consensus 274 v~~~dg 279 (332)
.....+
T Consensus 253 wd~~~~ 258 (340)
T 1got_B 253 FDLRAD 258 (340)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 445555
No 163
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.64 E-value=0.00013 Score=65.19 Aligned_cols=161 Identities=5% Similarity=0.011 Sum_probs=108.5
Q ss_pred ecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCC
Q 020019 41 HSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG 120 (332)
Q Consensus 41 ~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~ 120 (332)
.+......+++++|+|+++++...+|.|..++..+++. .. .+.. .. .....+.+.++ ++++++...
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~----~~--~~~~-~~---~~v~~~~~~~~-~~~l~s~s~--- 75 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVE----VR--SIQV-TE---TPVRAGKFIAR-KNWIIVGSD--- 75 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE----EE--EEEC-CS---SCEEEEEEEGG-GTEEEEEET---
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCce----eE--Eeec-cC---CcEEEEEEeCC-CCEEEEECC---
Confidence 33333567899999999888888899999999876641 11 2221 11 24578888886 554444332
Q ss_pred CccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-C-ceEEEecCCCCCCccccc
Q 020019 121 NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-G-EFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 121 ~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g-~~~~~~~~~~~~~p~~~~ 198 (332)
.+.+.+||.++++......- . ....+.+++.|+++++++-+..+.|...|.. + .....+..
T Consensus 76 --d~~i~vwd~~~~~~~~~~~~--h---~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~---------- 138 (304)
T 2ynn_A 76 --DFRIRVFNYNTGEKVVDFEA--H---PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG---------- 138 (304)
T ss_dssp --TSEEEEEETTTCCEEEEEEC--C---SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC----------
T ss_pred --CCEEEEEECCCCcEEEEEeC--C---CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc----------
Confidence 45789999999887654432 1 2457789999999988888888888888765 3 22222211
Q ss_pred CccccCeEEEccC-ceEEEEeCCCCeEEEEeCCCC
Q 020019 199 NLVGLNGIVYHPD-GFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 199 ~~~~~nGi~~~~d-G~Lyva~~~~~~i~~id~~~~ 232 (332)
.......++|+|+ +.++++-...+.|..+|+...
T Consensus 139 h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~ 173 (304)
T 2ynn_A 139 HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (304)
T ss_dssp CCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCS
T ss_pred cCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 1123578999984 566666677888988888755
No 164
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.63 E-value=8.7e-06 Score=70.94 Aligned_cols=163 Identities=11% Similarity=0.098 Sum_probs=101.3
Q ss_pred cCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCC-CcEEEEEec
Q 020019 64 LDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLST-WNRLFLTQL 142 (332)
Q Consensus 64 ~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~-g~~~~~~~l 142 (332)
.+++|+.++..+++. . .+.... ..+..++++++ |+.+++.. .+.|++||.++ ++.......
T Consensus 20 ~~~~i~~~d~~~~~~-----~--~~~~~~----~~v~~~~~spd-g~~l~~~~------~~~i~~~d~~~~~~~~~~~~~ 81 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKM-----R--VVWQTP----ELFEAPNWSPD-GKYLLLNS------EGLLYRLSLAGDPSPEKVDTG 81 (297)
T ss_dssp CCEEEEEEETTTTEE-----E--EEEEES----SCCEEEEECTT-SSEEEEEE------TTEEEEEESSSCCSCEECCCT
T ss_pred cceeEEEEeCCCCce-----e--eeccCC----cceEeeEECCC-CCEEEEEc------CCeEEEEeCCCCCCceEeccc
Confidence 457899999876652 1 233221 25678999997 66555543 24799999988 776532211
Q ss_pred CCCCCCCCCccceEECCCCc-EEEEeC---CCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEE
Q 020019 143 SGPSDGKSCADDVTVDAEGN-AYVTDV---TGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVI 217 (332)
Q Consensus 143 ~~~~~~~~~~ndiavd~dG~-lyvtd~---~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva 217 (332)
.......++++.|+|+ ++++.. ....|+.++.++.....+... .....++++||| .|+++
T Consensus 82 ----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----------~~~~~~~~spdg~~l~~~ 146 (297)
T 2ojh_A 82 ----FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN-----------LPSYWHGWSPDGKSFTYC 146 (297)
T ss_dssp ----TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS-----------SSEEEEEECTTSSEEEEE
T ss_pred ----cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC-----------CCccceEECCCCCEEEEE
Confidence 1135678899999997 444432 367899998765433222111 125678999999 77766
Q ss_pred eCCCC--eEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEe
Q 020019 218 HTFSG--NLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAG 267 (332)
Q Consensus 218 ~~~~~--~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~ 267 (332)
....+ +||.++..++ ....+.. ....+..++++++|+ |+++.
T Consensus 147 ~~~~~~~~l~~~~~~~~-----~~~~~~~---~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 147 GIRDQVFDIYSMDIDSG-----VETRLTH---GEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEETTEEEEEEEETTTC-----CEEECCC---SSSCEEEEEECTTSSEEEEEE
T ss_pred ECCCCceEEEEEECCCC-----cceEccc---CCCccccceECCCCCEEEEEe
Confidence 55455 6788887755 2332221 223457889999987 55553
No 165
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.62 E-value=0.00011 Score=68.07 Aligned_cols=180 Identities=12% Similarity=0.088 Sum_probs=121.6
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++++.+++...+|.|..++..+++. .. .+... ......+.+++ ..++.+.. .+.
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~----~~--~~~~~----~~~v~~~~~~~--~~l~~~~~------dg~ 197 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK----LR--TMAGH----QARVGCLSWNR--HVLSSGSR------SGA 197 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EE--EECCC----SSCEEEEEEET--TEEEEEET------TSE
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCeE----EE--EecCC----CCceEEEEECC--CEEEEEcC------CCC
Confidence 456789999999888877789999999876652 11 22211 12567788864 45555443 467
Q ss_pred EEEEECCCC-cEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCcccc
Q 020019 126 VAAYDLSTW-NRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGL 203 (332)
Q Consensus 126 l~~~d~~~g-~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~ 203 (332)
+..||.+.. +......- ......++++.++|+.+++-+..+.|..+|.. ++....+.. .....
T Consensus 198 i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~----------~~~~v 262 (401)
T 4aez_A 198 IHHHDVRIANHQIGTLQG-----HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN----------HNAAV 262 (401)
T ss_dssp EEEEETTSSSCEEEEEEC-----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC----------CSSCC
T ss_pred EEEEecccCcceeeEEcC-----CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC----------CcceE
Confidence 899999843 33332221 13467789999999988888888899998876 343332211 11345
Q ss_pred CeEEEccCc-eEEEEeC--CCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEE
Q 020019 204 NGIVYHPDG-FLIVIHT--FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVA 266 (332)
Q Consensus 204 nGi~~~~dG-~Lyva~~--~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va 266 (332)
..++++|++ .++++-. ..+.|..+++.+++ .+..+... .....+++.++|+.+++
T Consensus 263 ~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~----~~~~~~~~----~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 263 KAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA----RVNTVDAG----SQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp CEEEECTTSTTEEEEECCTTTCEEEEEETTTCC----EEEEEECS----SCEEEEEECSSSSEEEE
T ss_pred EEEEECCCCCCEEEEecCCCCCEEEEEECCCCC----EEEEEeCC----CcEEEEEECCCCCeEEE
Confidence 799999988 8887754 68899999998762 45545432 34678999999887776
No 166
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.61 E-value=3.4e-05 Score=72.52 Aligned_cols=161 Identities=11% Similarity=0.087 Sum_probs=100.3
Q ss_pred CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCe-EEEEEeCcCCCccceEEEEECCCCcEEEEEecCC
Q 020019 66 GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR-LLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSG 144 (332)
Q Consensus 66 g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~-l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~ 144 (332)
++|+.+|.+++.. . .+.... .....+++.|+ |+ |+.+..+. +...|+.||+++++.......
T Consensus 159 ~~i~i~d~~g~~~-----~--~l~~~~----~~v~~~~~Spd-g~~la~~s~~~---~~~~i~~~d~~tg~~~~l~~~-- 221 (415)
T 2hqs_A 159 YELRVSDYDGYNQ-----F--VVHRSP----QPLMSPAWSPD-GSKLAYVTFES---GRSALVIQTLANGAVRQVASF-- 221 (415)
T ss_dssp EEEEEEETTSCSC-----E--EEEEES----SCEEEEEECTT-SSEEEEEECTT---SSCEEEEEETTTCCEEEEECC--
T ss_pred ceEEEEcCCCCCC-----E--EEeCCC----CcceeeEEcCC-CCEEEEEEecC---CCcEEEEEECCCCcEEEeecC--
Confidence 6899999875432 1 333211 25678999997 65 44444321 124799999999887543322
Q ss_pred CCCCCCCccceEECCCCc-EEEEeCC--CCeEEEEcCCC-ceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeC
Q 020019 145 PSDGKSCADDVTVDAEGN-AYVTDVT--GSKIWKVGVKG-EFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHT 219 (332)
Q Consensus 145 ~~~~~~~~ndiavd~dG~-lyvtd~~--~~~I~~v~~~g-~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~ 219 (332)
......+++.|||+ |+++.+. ...|+.++..+ +...+... ......++|+||| .|+++..
T Consensus 222 ----~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~-----------~~~~~~~~~spdg~~l~~~s~ 286 (415)
T 2hqs_A 222 ----PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG-----------RSNNTEPTWFPDSQNLAFTSD 286 (415)
T ss_dssp ----SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCC-----------SSCEEEEEECTTSSEEEEEEC
T ss_pred ----CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCC-----------CCcccceEECCCCCEEEEEEC
Confidence 23567899999997 6656543 45699999864 43332211 1234688999999 7777764
Q ss_pred CCC--eEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEE
Q 020019 220 FSG--NLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVA 266 (332)
Q Consensus 220 ~~~--~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va 266 (332)
..+ +|+.+++.++ ....+... ......+++.+||+.++.
T Consensus 287 ~~g~~~i~~~d~~~~-----~~~~l~~~---~~~~~~~~~spdG~~l~~ 327 (415)
T 2hqs_A 287 QAGRPQVYKVNINGG-----APQRITWE---GSQNQDADVSSDGKFMVM 327 (415)
T ss_dssp TTSSCEEEEEETTSS-----CCEECCCS---SSEEEEEEECTTSSEEEE
T ss_pred CCCCcEEEEEECCCC-----CEEEEecC---CCcccCeEECCCCCEEEE
Confidence 333 8999999876 23323222 123456888999874444
No 167
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.60 E-value=9e-06 Score=81.28 Aligned_cols=191 Identities=14% Similarity=0.080 Sum_probs=114.4
Q ss_pred ccceEEcCCCCEEEEEe---------------------------------cCCeEEEEECCCCCCCccceeeeEEecccC
Q 020019 47 RECAKWDDSGRRFIVSF---------------------------------LDGGIGQVAVPDDYPPGTVLEEVTLVKDLE 93 (332)
Q Consensus 47 pegia~d~~g~~~~~~~---------------------------------~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~ 93 (332)
+.+++|+|||+.++... ...+|+.++..+++. ..+....
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~--------~~~~~~~ 254 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT--------VYLQTGE 254 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE--------EECCCCS
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce--------EeeccCC
Confidence 47899999999665542 235689999876641 1111111
Q ss_pred cCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCC-cEEEEEecCCCCCCCCCccceEECC--CCcEEEEeC--
Q 020019 94 LTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTW-NRLFLTQLSGPSDGKSCADDVTVDA--EGNAYVTDV-- 168 (332)
Q Consensus 94 ~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g-~~~~~~~l~~~~~~~~~~ndiavd~--dG~lyvtd~-- 168 (332)
.....+..+++.++...|+++..+.. .....|..||.+++ +......-.. .......+.+++.| ||+++++..
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~v~~~d~~~g~~~~~~~~~~~-~~~~~~~~~~~~sp~~dg~~l~~~~~~ 332 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRA-QNECKVNAYDAETGRFVRTLFVETD-KHYVEPLHPLTFLPGSNNQFIWQSRRD 332 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEC-SSCCCCCSCCEECTTCSSEEEEEECTT
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCC-CCeeEEEEEECCCCceeeEEEEccC-CCeECccCCceeecCCCCEEEEEEccC
Confidence 11124678999997334666554321 12357899999988 4433322111 10012346789999 997544433
Q ss_pred CCCeEEEEcCCCceEEEecCCCCCCcccccCccccCe-EEEccCc-eEEEEeCCCC----eEEEEeCCCCCCccceeEEE
Q 020019 169 TGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNG-IVYHPDG-FLIVIHTFSG----NLFKIDIVDGVGEGEEIKLI 242 (332)
Q Consensus 169 ~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nG-i~~~~dG-~Lyva~~~~~----~i~~id~~~~~~~~~~~~~v 242 (332)
+...||.++.+++....+.... ..... +++++|| .||++....+ +||+++++++ ..+.+
T Consensus 333 g~~~l~~~~~~~~~~~~l~~~~----------~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~-----~~~~l 397 (706)
T 2z3z_A 333 GWNHLYLYDTTGRLIRQVTKGE----------WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG-----KTKDL 397 (706)
T ss_dssp SSCEEEEEETTSCEEEECCCSS----------SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC-----CCEES
T ss_pred CccEEEEEECCCCEEEecCCCC----------eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC-----Cceec
Confidence 3457999997776544332211 11234 7899999 8988877655 8999999876 23323
Q ss_pred EecCCCCCCCCeEEEeCCCeEEEE
Q 020019 243 RVAGGPLSFGDGLELLSPTKLVVA 266 (332)
Q Consensus 243 ~~~g~~~~~pdGi~~~~dG~l~va 266 (332)
.. ......+++.+||+.++.
T Consensus 398 ~~----~~~~~~~~~spdg~~l~~ 417 (706)
T 2z3z_A 398 TP----ESGMHRTQLSPDGSAIID 417 (706)
T ss_dssp CC----SSSEEEEEECTTSSEEEE
T ss_pred cC----CCceEEEEECCCCCEEEE
Confidence 21 123457889999885554
No 168
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.59 E-value=0.00021 Score=65.90 Aligned_cols=246 Identities=9% Similarity=0.090 Sum_probs=137.9
Q ss_pred EecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 40 YHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 40 ~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
+.+.......++|+++|+++++...++.|..++..+++. .. .+.... .....++++++ |++.++.....
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~----~~--~~~~h~----~~v~~~~~s~~-g~~las~~~d~ 130 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQK----TH--AIKLHC----PWVMECAFAPN-GQSVACGGLDS 130 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE----EE--EEECCC----TTCCCCEECTT-SSEEEECCSSS
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc----ce--EEecCC----CCEEEEEECCC-CCEEEEeeCCC
Confidence 344444567899999999888888889999999876542 11 111110 12233444443 32222110000
Q ss_pred ---------------------------------------C------CccceEEEEECCCCcEEEEEecCCCCCCCCCccc
Q 020019 120 ---------------------------------------G------NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADD 154 (332)
Q Consensus 120 ---------------------------------------~------~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~nd 154 (332)
. ...+.+..||.++++.........+.........
T Consensus 131 ~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 210 (380)
T 3iz6_a 131 ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS 210 (380)
T ss_dssp CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE
T ss_pred cEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE
Confidence 0 0134577888888776554432111111234556
Q ss_pred eEECC-CCcEEEEeCCCCeEEEEcCC--CceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCC
Q 020019 155 VTVDA-EGNAYVTDVTGSKIWKVGVK--GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVD 231 (332)
Q Consensus 155 iavd~-dG~lyvtd~~~~~I~~v~~~--g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~ 231 (332)
+++.+ +++++++-+..+.|..+|.. ++....+.. .....+.++|+|+|..+++-...+.|..+|+.+
T Consensus 211 ~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~----------h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 211 LSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG----------HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp EEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC----------CSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred EEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC----------cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 77766 67888888888888888764 232222211 113467999999997777777888999999987
Q ss_pred CCCccceeEEEEecC----CCCCCCCeEEEeCCCeEEEEeC--CceEEEEcCCCceEEEEEeeecCCCcccceEEEE-EC
Q 020019 232 GVGEGEEIKLIRVAG----GPLSFGDGLELLSPTKLVVAGN--PSARLVESSDGWETAAVVAKFSGPVHRLATAATV-KD 304 (332)
Q Consensus 232 ~~~~~~~~~~v~~~g----~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~ 304 (332)
+. .+..+.... ........+++.++|+++++.. +..++-....+.....+ ...........+++++ .+
T Consensus 281 ~~----~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~-~~~~~~h~~~v~~l~~s~d 355 (380)
T 3iz6_a 281 GH----QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL-GTLQNSHEGRISCLGLSSD 355 (380)
T ss_dssp TE----EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE-CCSCSSCCCCCCEEEECSS
T ss_pred Cc----EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE-ecccCCCCCceEEEEECCC
Confidence 62 343333210 1123357899999999888863 33343344455222122 1111111233577888 66
Q ss_pred CeEEEEE
Q 020019 305 GRVYLNH 311 (332)
Q Consensus 305 g~lyv~~ 311 (332)
+.++++.
T Consensus 356 g~~l~sg 362 (380)
T 3iz6_a 356 GSALCTG 362 (380)
T ss_dssp SSEEEEE
T ss_pred CCEEEEe
Confidence 6655543
No 169
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.59 E-value=5.7e-06 Score=83.15 Aligned_cols=191 Identities=15% Similarity=0.163 Sum_probs=111.1
Q ss_pred cccceEEcCCCCEEEEEec-CC-----eEEEEECCCCCCCccceeeeEEecccCcC--------------------C-Cc
Q 020019 46 FRECAKWDDSGRRFIVSFL-DG-----GIGQVAVPDDYPPGTVLEEVTLVKDLELT--------------------G-NG 98 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~-~g-----~I~~vd~~~~~~~~~~~~~~~~~~~~~~~--------------------~-~~ 98 (332)
.+..+++++||+.++.... ++ .|+.++..+++. . .+....... + ..
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQT-----R--LLVDSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCE-----E--EEECGGGTC--------------------CCEE
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCce-----e--EccchhhcccccccccchhhhhhhhhhhccccC
Confidence 4678999999997665533 55 899999887752 1 222211110 0 12
Q ss_pred cceEEEeCCCCe-EEEEEeCcCCCccceEEEEECCCC---cEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeE
Q 020019 99 SLGLVLDHPRNR-LLVVAADVFGNKYSAVAAYDLSTW---NRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKI 173 (332)
Q Consensus 99 ~~gi~vd~~~g~-l~v~~~~~~~~~~~~l~~~d~~~g---~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I 173 (332)
...++++|+ |+ |+++.. +.|+.||.+++ +.. .+. ........+++.|||+ |+++. .+.|
T Consensus 111 v~~~~~SpD-g~~l~~~~~-------~~i~~~d~~~~~~~~~~---~l~---~~~~~~~~~~~SPDG~~la~~~--~~~i 174 (741)
T 2ecf_A 111 IVDYQWSPD-AQRLLFPLG-------GELYLYDLKQEGKAAVR---QLT---HGEGFATDAKLSPKGGFVSFIR--GRNL 174 (741)
T ss_dssp SCCCEECTT-SSEEEEEET-------TEEEEEESSSCSTTSCC---BCC---CSSSCEEEEEECTTSSEEEEEE--TTEE
T ss_pred cceeEECCC-CCEEEEEeC-------CcEEEEECCCCCcceEE---Ecc---cCCcccccccCCCCCCEEEEEe--CCcE
Confidence 568899997 65 444432 57899999887 443 231 1124577899999997 54443 3589
Q ss_pred EEEcCCC-ceEEEecCCCCCC----ccc--ccCccccCeEEEccCc-eEEEEeCCCC-----------------------
Q 020019 174 WKVGVKG-EFLSIISSPLFTP----KEW--YKNLVGLNGIVYHPDG-FLIVIHTFSG----------------------- 222 (332)
Q Consensus 174 ~~v~~~g-~~~~~~~~~~~~~----p~~--~~~~~~~nGi~~~~dG-~Lyva~~~~~----------------------- 222 (332)
+.++.++ +..++........ +.+ ........+++|+||| .|+++....+
T Consensus 175 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (741)
T 2ecf_A 175 WVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254 (741)
T ss_dssp EEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC
T ss_pred EEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC
Confidence 9999875 4333321111000 000 0011225789999999 7888754332
Q ss_pred ---------eEEEEeCCC-CCCccceeEEEEecCCCCCCCCeEEEeCCCeEEE
Q 020019 223 ---------NLFKIDIVD-GVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVV 265 (332)
Q Consensus 223 ---------~i~~id~~~-~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~v 265 (332)
+|+.+++++ ++ ...+............+++ +||+.++
T Consensus 255 ~~g~~~~~~~l~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~~-pDg~~l~ 301 (741)
T 2ecf_A 255 AAGDANVQVKLGVISPAEQAQ-----TQWIDLGKEQDIYLARVNW-RDPQHLS 301 (741)
T ss_dssp BTTSCCCEEEEEEECSSTTCC-----CEEECCCSCSSEEEEEEEE-EETTEEE
T ss_pred CCCCCCCeeEEEEEECCCCCc-----eEEecCCCCcceEEEEEEe-CCCCEEE
Confidence 677788876 62 2223221011234567889 9987444
No 170
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.59 E-value=0.00011 Score=68.22 Aligned_cols=207 Identities=12% Similarity=0.097 Sum_probs=123.3
Q ss_pred ccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceE
Q 020019 47 RECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAV 126 (332)
Q Consensus 47 pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l 126 (332)
...++++++|+.+++...++.|..+|..+++. .. .+.... .....+++.++ +..+++... .+.+
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~----~~--~~~~h~----~~v~~~~~~p~-~~~l~s~s~-----d~~v 189 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKI----VM--ILQGHE----QDIYSLDYFPS-GDKLVSGSG-----DRTV 189 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEE----EE--EECCCS----SCEEEEEECTT-SSEEEEEET-----TSEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcE----EE--EEccCC----CCEEEEEEcCC-CCEEEEecC-----CCcE
Confidence 45789999999888877789999999876642 11 221111 25688999997 554444332 3578
Q ss_pred EEEECCCCcEEEEEecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccC
Q 020019 127 AAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 127 ~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
..||.++++....... ......+++.| +|+++++-+..+.|..+|.. ++....+....... ........
T Consensus 190 ~iwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~---~~h~~~v~ 260 (393)
T 1erj_A 190 RIWDLRTGQCSLTLSI------EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESG---TGHKDSVY 260 (393)
T ss_dssp EEEETTTTEEEEEEEC------SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---------CCCSSCEE
T ss_pred EEEECCCCeeEEEEEc------CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCC---CCCCCCEE
Confidence 8999998876655443 13456788998 78888888888888888876 44433321110000 00123457
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCcc------ceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEEEc
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEG------EEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLVES 276 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~------~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~ 276 (332)
.++|+++|.++++-...++|..+++....... .........+ .......+++.++|+++++.. ...++-..
T Consensus 261 ~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEec-ccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 89999999555566677888888876431100 0011111221 223345788888888777753 22333344
Q ss_pred CCC
Q 020019 277 SDG 279 (332)
Q Consensus 277 ~dg 279 (332)
.++
T Consensus 340 ~~~ 342 (393)
T 1erj_A 340 KSG 342 (393)
T ss_dssp TTC
T ss_pred CCC
Confidence 555
No 171
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.58 E-value=2e-05 Score=72.33 Aligned_cols=139 Identities=20% Similarity=0.393 Sum_probs=85.8
Q ss_pred CccceEEE--eCCCCeEEEEEeCcCCCccceEEEEEC---CCC----cEEEEEecCCCCCCCCCccceEECCC-CcEEEE
Q 020019 97 NGSLGLVL--DHPRNRLLVVAADVFGNKYSAVAAYDL---STW----NRLFLTQLSGPSDGKSCADDVTVDAE-GNAYVT 166 (332)
Q Consensus 97 ~~~~gi~v--d~~~g~l~v~~~~~~~~~~~~l~~~d~---~~g----~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvt 166 (332)
..|.||++ ++..+++|+.-.+ +.+.+..|++ ..| ++++.+.+. +-+-++++|+. |.||++
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~----k~G~~~q~~l~~~~~g~~~~~lVR~f~lg------sq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTG----KEGEFEQYELKADKNGYISGKKVRAFKMN------SQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEEC----SSSEEEEEEEEECTTSCEEEEEEEEEECS------SCEEEEEEETTTTEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEEC----CCCeEEEEEEEeCCCCcccceEEEEecCC------CCcceEEEcCCCCeEEEe
Confidence 47899999 7765764444332 2345666655 333 334445552 35778999986 789999
Q ss_pred eCCCCeEEEEcCC--C----ceEEEecCCCCCCcccccCccccCeEEEc--cC--ceEEEEeCCCCeEEEEeCC-CCCCc
Q 020019 167 DVTGSKIWKVGVK--G----EFLSIISSPLFTPKEWYKNLVGLNGIVYH--PD--GFLIVIHTFSGNLFKIDIV-DGVGE 235 (332)
Q Consensus 167 d~~~~~I~~v~~~--g----~~~~~~~~~~~~~p~~~~~~~~~nGi~~~--~d--G~Lyva~~~~~~i~~id~~-~~~~~ 235 (332)
+...+ ||+++.+ + +....+....+. ..+-||++. ++ |+|++++.++++...++.+ +.
T Consensus 198 eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~--------aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~--- 265 (355)
T 3amr_A 198 EEDEA-IWKFSAEPDGGSNGTVIDRADGRHLT--------RDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKN--- 265 (355)
T ss_dssp ETTTE-EEEEECSTTSCSCCEEEEEBSSSSBC--------SCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTC---
T ss_pred cccce-EEEEeCCcCCCCCceEEEEecCCccc--------cCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCC---
Confidence 99855 9999954 3 222222222221 135699984 44 4799999999999999987 33
Q ss_pred cceeEEEEecCCC----CCCCCeEEEe
Q 020019 236 GEEIKLIRVAGGP----LSFGDGLELL 258 (332)
Q Consensus 236 ~~~~~~v~~~g~~----~~~pdGi~~~ 258 (332)
+.+..+.+...+ ....||+++.
T Consensus 266 -~~vg~f~Ig~~~~idgv~eTDG~~v~ 291 (355)
T 3amr_A 266 -KYVADFRITDGPETDGTSDTDGIDVL 291 (355)
T ss_dssp -CEEEEEEECCCSSSCCCCSCCCEEEE
T ss_pred -cEEEEEEecCCCCceeeeccCcceEE
Confidence 245555543111 2346666553
No 172
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.57 E-value=5.9e-05 Score=70.55 Aligned_cols=222 Identities=11% Similarity=0.068 Sum_probs=135.1
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++|+++++...++.|..+|..+++. .. ++... ......+++.++ +..+++.. ..+.
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~----~~--~~~~h----~~~V~~v~~~p~-~~~l~s~s-----~D~~ 215 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFEC----IR--TMHGH----DHNVSSVSIMPN-GDHIVSAS-----RDKT 215 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCE----EE--CCCCC----SSCEEEEEECSS-SSEEEEEE-----TTSE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce----eE--EEcCC----CCCEEEEEEeCC-CCEEEEEe-----CCCe
Confidence 345688999999888777789999998875541 11 12111 125688999997 65444433 2457
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccC
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
+..||.++++....+.- . ....+.+++.++|+++++-+..+.|..++.. ++....+... ....+
T Consensus 216 i~~wd~~~~~~~~~~~~--h---~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h----------~~~v~ 280 (410)
T 1vyh_C 216 IKMWEVQTGYCVKTFTG--H---REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH----------RHVVE 280 (410)
T ss_dssp EEEEETTTCCEEEEEEC--C---SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC----------SSCEE
T ss_pred EEEEECCCCcEEEEEeC--C---CccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCC----------CceEE
Confidence 88999999886554432 1 2456778999999999988888888888865 3333222111 11235
Q ss_pred eEEEccC--------------------ceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEE
Q 020019 205 GIVYHPD--------------------GFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLV 264 (332)
Q Consensus 205 Gi~~~~d--------------------G~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~ 264 (332)
.++|+|+ |.+.++-...+.|..+|+.++ ..+..+.. ......++++.++|+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~----~~~~~~~~---h~~~v~~v~~~~~g~~l 353 (410)
T 1vyh_C 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG----MCLMTLVG---HDNWVRGVLFHSGGKFI 353 (410)
T ss_dssp EEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT----EEEEEEEC---CSSCEEEEEECSSSSCE
T ss_pred EEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC----ceEEEEEC---CCCcEEEEEEcCCCCEE
Confidence 6667665 545666667788988998876 23433331 22445689999998877
Q ss_pred EEeC-C-ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-ECCeEEEE
Q 020019 265 VAGN-P-SARLVESSDGWETAAVVAKFSGPVHRLATAATV-KDGRVYLN 310 (332)
Q Consensus 265 va~~-~-~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~ 310 (332)
++.. . ..++-....+... ..+..- -...+++++ .++.+.++
T Consensus 354 ~s~s~D~~i~vwd~~~~~~~----~~~~~h-~~~v~~l~~~~~~~~l~s 397 (410)
T 1vyh_C 354 LSCADDKTLRVWDYKNKRCM----KTLNAH-EHFVTSLDFHKTAPYVVT 397 (410)
T ss_dssp EEEETTTEEEEECCTTSCCC----EEEECC-SSCEEEEEECSSSSCEEE
T ss_pred EEEeCCCeEEEEECCCCceE----EEEcCC-CCcEEEEEEcCCCCEEEE
Confidence 7653 2 2333333444122 222211 123477888 55555443
No 173
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.55 E-value=0.00015 Score=64.68 Aligned_cols=222 Identities=10% Similarity=0.049 Sum_probs=134.9
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....+++.++++.+++...++.|..++..+++. .. .+.... .....++++++ +.++++... .+.
T Consensus 57 ~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~----~~--~~~~h~----~~v~~~~~~~~-~~~l~sgs~-----D~~ 120 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK----VV--DFEAHP----DYIRSIAVHPT-KPYVLSGSD-----DLT 120 (304)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE----EE--EEECCS----SCEEEEEECSS-SSEEEEEET-----TSC
T ss_pred cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE----EE--EEeCCC----CcEEEEEEcCC-CCEEEEECC-----CCe
Confidence 345688999999888888889999999887652 11 232222 25789999997 654444332 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCCC-ce-EEEecCCCCCCcccccCccc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVKG-EF-LSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~g-~~-~~~~~~~~~~~p~~~~~~~~ 202 (332)
+..||.+++.... ..+.+ .......+++.| +++++++-+..+.|..+|... +. ..+... ....
T Consensus 121 v~lWd~~~~~~~~-~~~~~---h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~----------~~~~ 186 (304)
T 2ynn_A 121 VKLWNWENNWALE-QTFEG---HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG----------QERG 186 (304)
T ss_dssp EEEEEGGGTTEEE-EEECC---CCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECC----------CTTC
T ss_pred EEEEECCCCcchh-hhhcc---cCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccC----------CcCc
Confidence 8899998764332 12321 134567899998 568888888888888888642 21 111111 0122
Q ss_pred cCeEEEcc--CceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEEEcCC
Q 020019 203 LNGIVYHP--DGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLVESSD 278 (332)
Q Consensus 203 ~nGi~~~~--dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~~d 278 (332)
.+.+.+.+ ++.+.++-...+.|..+|+.++ +.+..+.. .......+++.+++.++++.. +..++-....
T Consensus 187 v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~----~~~~~~~~---h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 187 VNYVDYYPLPDKPYMITASDDLTIKIWDYQTK----SCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp EEEEEECCSTTCCEEEEEETTSEEEEEETTTT----EEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC----ccceeeCC---CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 34567765 6656666667888988998876 23443432 334456788999988777753 3344434555
Q ss_pred CceEEEEEeeecCCCcccceEEEE-E-CCeEEE
Q 020019 279 GWETAAVVAKFSGPVHRLATAATV-K-DGRVYL 309 (332)
Q Consensus 279 g~~~~~~~~~~~~~~~~~pt~va~-~-~g~lyv 309 (332)
+ ++...+... .....++++ . +++.|+
T Consensus 260 ~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 287 (304)
T 2ynn_A 260 Y----KVEKTLNVG-LERSWCIATHPTGRKNYI 287 (304)
T ss_dssp C----CEEEEECCS-SSSEEEEEECTTCGGGCE
T ss_pred C----ceeeeccCC-CccEEEEEECCCCCceEE
Confidence 5 333333321 334467776 3 344444
No 174
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.55 E-value=4.3e-06 Score=76.91 Aligned_cols=186 Identities=8% Similarity=0.034 Sum_probs=121.2
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....+++.++|+.+++...++.|..+|..+++. .. .+.... .....+++.++...++++... .+.
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~----~~--~~~~h~----~~v~~v~~s~~~~~~~~s~~~-----dg~ 205 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV----LK--SYNAHS----SEVNCVAACPGKDTIFLSCGE-----DGR 205 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTTEE----EE--EECCCS----SCEEEEEECTTCSSCEEEEET-----TSC
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE----EE--EEcCCC----CCEEEEEEccCCCceeeeecc-----CCc
Confidence 345789999999888877889999999876652 11 221111 256789998864445555432 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCC-cEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCcccc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEG-NAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGL 203 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG-~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~ 203 (332)
|..||.++++......+. ........+++.|++ +++++-...+.|..+|.. ++....+.. .....
T Consensus 206 v~~wd~~~~~~~~~~~~~---~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~----------~~~~v 272 (357)
T 4g56_B 206 ILLWDTRKPKPATRIDFC---ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV----------HSQNI 272 (357)
T ss_dssp EEECCTTSSSCBCBCCCT---TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC----------CSSCE
T ss_pred eEEEECCCCceeeeeeec---cccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec----------cceeE
Confidence 889999988765433331 123557789999984 677777777888888865 443332211 11235
Q ss_pred CeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC-CCeEEEEe
Q 020019 204 NGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS-PTKLVVAG 267 (332)
Q Consensus 204 nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~ 267 (332)
+.|+|+|+| .+.++-...++|..+|.+++ +..+. .+ .-....++++.| |++++++.
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~~~----~~~~~---~~-H~~~V~~vafsP~d~~~l~s~ 330 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDADFS----EVFRD---LS-HRDFVTGVAWSPLDHSKFTTV 330 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTSC----EEEEE---CC-CSSCEEEEEECSSSTTEEEEE
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECCCC----cEeEE---CC-CCCCEEEEEEeCCCCCEEEEE
Confidence 789999998 66666667788988998876 22222 21 234567899987 77777764
No 175
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.54 E-value=3.6e-05 Score=76.02 Aligned_cols=227 Identities=11% Similarity=0.036 Sum_probs=131.7
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
.+..++++|+|+.++... .+.|..++..+++. .. .+.... .....++++|+ |++.++... .+.
T Consensus 20 ~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~----~~--~~~~h~----~~v~~~~~spd-g~~lasg~~-----d~~ 82 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTD----TE--IYTEHS----HQTTVAKTSPS-GYYCASGDV-----HGN 82 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-TTEEEEEETTCSSC----CE--EECCCS----SCEEEEEECTT-SSEEEEEET-----TSE
T ss_pred ceeEEeeCCCCCEEEeCC-CCEEEEecCCCccc----Ce--EecCCC----CceEEEEECCC-CcEEEEEeC-----CCC
Confidence 677899999999776654 46888888875542 11 232111 25678999997 875554432 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC----CCeEEEEcCCCceEEEecCCCCCCcccccCcc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT----GSKIWKVGVKGEFLSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~----~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~ 201 (332)
+..||.++++......+.+. ....++++++|+|+..++-.. .+.|+.++. |+... .+. ....
T Consensus 83 v~lWd~~~~~~~~~~~~~~~---~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~-----~l~-----gh~~ 148 (611)
T 1nr0_A 83 VRIWDTTQTTHILKTTIPVF---SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNG-----NLT-----GQAR 148 (611)
T ss_dssp EEEEESSSTTCCEEEEEECS---SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBCB-----CCC-----CCSS
T ss_pred EEEeECCCCcceeeEeeccc---CCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCcc-----eec-----CCCC
Confidence 88999876543322333211 245778999999975554322 246666663 22211 111 0123
Q ss_pred ccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEEEcCC
Q 020019 202 GLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLVESSD 278 (332)
Q Consensus 202 ~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~~d 278 (332)
..+.++|+|++ .++++-...+.|..++..++ +.... +. .+......+++.|||+++++.. ...++-...+
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~----~~~~~--l~-~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~ 221 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF----KFKST--FG-EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 221 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTB----EEEEE--EC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCCC----eEeee--ec-cccCceEEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 46799999998 56777777888888887654 12322 23 2334567899999999888753 3344445566
Q ss_pred CceEEEEEee-ecC-CCcccceEEEE-ECCeEEEE
Q 020019 279 GWETAAVVAK-FSG-PVHRLATAATV-KDGRVYLN 310 (332)
Q Consensus 279 g~~~~~~~~~-~~~-~~~~~pt~va~-~~g~lyv~ 310 (332)
+.....+... +.. ..-....++++ .++++.++
T Consensus 222 g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s 256 (611)
T 1nr0_A 222 GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS 256 (611)
T ss_dssp CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE
T ss_pred CcEeeeeccccccccccCCCEEEEEECCCCCEEEE
Confidence 6222222110 000 11123466777 55555543
No 176
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.54 E-value=4.4e-05 Score=70.39 Aligned_cols=191 Identities=16% Similarity=0.134 Sum_probs=110.3
Q ss_pred cceEEEeCCCCeE-EEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEc
Q 020019 99 SLGLVLDHPRNRL-LVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVG 177 (332)
Q Consensus 99 ~~gi~vd~~~g~l-~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~ 177 (332)
...+++.|+ |++ .++... ..+.|.+||.++++....... .....++++.|||+++++-+... +.+++
T Consensus 136 ~~~v~fSpD-g~~la~as~~----~d~~i~iwd~~~~~~~~~~~~------~~~V~~v~fspdg~~l~s~s~~~-~~~~~ 203 (365)
T 4h5i_A 136 TKLVYISRE-GTVAAIASSK----VPAIMRIIDPSDLTEKFEIET------RGEVKDLHFSTDGKVVAYITGSS-LEVIS 203 (365)
T ss_dssp EEEEEECTT-SSCEEEEESC----SSCEEEEEETTTTEEEEEEEC------SSCCCEEEECTTSSEEEEECSSC-EEEEE
T ss_pred EEEEEEcCC-CCEEEEEECC----CCCEEEEeECCCCcEEEEeCC------CCceEEEEEccCCceEEecccee-EEEEE
Confidence 567899997 664 445432 235688999999887655442 23467899999998877766444 44444
Q ss_pred -CCCceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCC---eEEEEeCCCCCCccceeEEEEecCCCCCCC
Q 020019 178 -VKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSG---NLFKIDIVDGVGEGEEIKLIRVAGGPLSFG 252 (332)
Q Consensus 178 -~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~---~i~~id~~~~~~~~~~~~~v~~~g~~~~~p 252 (332)
.+++....... .. .......++|+||| .+..+....+ .++.++...... ...+.....+ .....
T Consensus 204 ~~~~~~~~~~~~-~~-------~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~--~~~~~~~~~~-~~~~V 272 (365)
T 4h5i_A 204 TVTGSCIARKTD-FD-------KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT--SVLRSKQVTN-RFKGI 272 (365)
T ss_dssp TTTCCEEEEECC-CC-------TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE--EEEEEEEEES-SCSCE
T ss_pred eccCcceeeeec-CC-------CCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee--cceeeeeecC-CCCCe
Confidence 44554322111 00 11235789999999 5555443332 456666654411 0112222221 23445
Q ss_pred CeEEEeCCCeEEEEe--CCceEEEEcCCCceEEEEEeeecCCCcccceEEEE-ECCeEEEEEecCcc
Q 020019 253 DGLELLSPTKLVVAG--NPSARLVESSDGWETAAVVAKFSGPVHRLATAATV-KDGRVYLNHMLGFG 316 (332)
Q Consensus 253 dGi~~~~dG~l~va~--~~~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~~~g~~ 316 (332)
..+++.|||+++++. ...+++....++ +.+..+...--...++++| .++++.++.-....
T Consensus 273 ~~~~~Spdg~~lasgs~D~~V~iwd~~~~----~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 273 TSMDVDMKGELAVLASNDNSIALVKLKDL----SMSKIFKQAHSFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEETTTT----EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred EeEEECCCCCceEEEcCCCEEEEEECCCC----cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence 688999999988875 234555566666 3333322111223478999 77877775544433
No 177
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.53 E-value=6.5e-05 Score=69.10 Aligned_cols=199 Identities=10% Similarity=0.075 Sum_probs=120.7
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++++++++...++.|..++.. ++. .. .+... ......+++.++...|+++.. .+.
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-~~~----~~--~~~~~----~~~v~~~~~~~~~~~l~~~~~------d~~ 172 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKT-GAL----LN--VLNFH----RAPIVSVKWNKDGTHIISMDV------ENV 172 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETT-SCE----EE--EECCC----CSCEEEEEECTTSSEEEEEET------TCC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCe----ee--eccCC----CccEEEEEECCCCCEEEEEec------CCe
Confidence 45678999999988887778999999843 431 11 22211 125788999997334444443 356
Q ss_pred EEEEECCCCcEEEEEecCCCCC----------CCCCccceEECCCCcEEEEeCCCCeEEEEcCCC-ceEEEecCCCCCCc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSD----------GKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG-EFLSIISSPLFTPK 194 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~----------~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g-~~~~~~~~~~~~~p 194 (332)
+..||.++++............ .......+++.+++. +++-...+.|+.++... +....+..
T Consensus 173 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~d~~~~~~~~~~~~------ 245 (425)
T 1r5m_A 173 TILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPKGAIFVYQITEKTPTGKLIG------ 245 (425)
T ss_dssp EEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEECGGGCEEEEETTCSSCSEEECC------
T ss_pred EEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCCCeEEEEEcCCCceeeeecc------
Confidence 8899999888766554421100 011267888888865 55555678888888663 32222211
Q ss_pred ccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC-ceEE
Q 020019 195 EWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP-SARL 273 (332)
Q Consensus 195 ~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~-~~~~ 273 (332)
.......+++++++.++++-...+.|..+++.+++ .+..+.. .......+++.++|.++++... ..++
T Consensus 246 ----~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~---~~~~i~~~~~~~~~~l~~~~~d~~i~i 314 (425)
T 1r5m_A 246 ----HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN----SQNCFYG---HSQSIVSASWVGDDKVISCSMDGSVRL 314 (425)
T ss_dssp ----CSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS----CSEEECC---CSSCEEEEEEETTTEEEEEETTSEEEE
T ss_pred ----CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc----cceEecC---CCccEEEEEECCCCEEEEEeCCCcEEE
Confidence 11235789999999444445567789889988652 3443332 2245678899999944444443 3344
Q ss_pred EEcCCC
Q 020019 274 VESSDG 279 (332)
Q Consensus 274 v~~~dg 279 (332)
.....+
T Consensus 315 ~d~~~~ 320 (425)
T 1r5m_A 315 WSLKQN 320 (425)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 444555
No 178
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.53 E-value=3e-05 Score=70.36 Aligned_cols=192 Identities=12% Similarity=0.093 Sum_probs=121.7
Q ss_pred CccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 44 SFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
......++++++++.+++...++.|..++..+++. .. ... ... ....+..+.++++ ++.+++... .
T Consensus 52 ~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~--~~~-~~~-~~~~v~~~~~~~~-~~~l~~~~~-----d 117 (372)
T 1k8k_C 52 NGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW----KP--TLV-ILR-INRAARCVRWAPN-EKKFAVGSG-----S 117 (372)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE----EE--EEE-CCC-CSSCEEEEEECTT-SSEEEEEET-----T
T ss_pred CCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee----ee--eEE-eec-CCCceeEEEECCC-CCEEEEEeC-----C
Confidence 33556799999999888777789999888765541 11 111 011 1125788999997 554444332 3
Q ss_pred ceEEEEECCCCcEEEE-EecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-------------------CceE
Q 020019 124 SAVAAYDLSTWNRLFL-TQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-------------------GEFL 183 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~-~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-------------------g~~~ 183 (332)
+.+..||.++++.... ..+..+ .......+++.++|+.+++-...+.|..++.. ++..
T Consensus 118 ~~v~i~d~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (372)
T 1k8k_C 118 RVISICYFEQENDWWVCKHIKKP--IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELM 195 (372)
T ss_dssp SSEEEEEEETTTTEEEEEEECTT--CCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEE
T ss_pred CEEEEEEecCCCcceeeeeeecc--cCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhhe
Confidence 4678888877653221 122111 13567889999999888887778888888742 3322
Q ss_pred EEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeE
Q 020019 184 SIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKL 263 (332)
Q Consensus 184 ~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l 263 (332)
..+.. .....+.++++++|.++++-...+.|..++..+++ .+..+... ......+++.++|++
T Consensus 196 ~~~~~----------~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~---~~~v~~~~~~~~~~~ 258 (372)
T 1k8k_C 196 FESSS----------SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM----AVATLASE---TLPLLAVTFITESSL 258 (372)
T ss_dssp EECCC----------CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT----EEEEEECS---SCCEEEEEEEETTEE
T ss_pred EecCC----------CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc----eeEEEccC---CCCeEEEEEecCCCE
Confidence 22211 12346789999999444444567889999998762 45545432 234578999999998
Q ss_pred EEEeC
Q 020019 264 VVAGN 268 (332)
Q Consensus 264 ~va~~ 268 (332)
+++..
T Consensus 259 l~~~~ 263 (372)
T 1k8k_C 259 VAAGH 263 (372)
T ss_dssp EEEET
T ss_pred EEEEe
Confidence 88763
No 179
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.52 E-value=2.1e-05 Score=71.70 Aligned_cols=190 Identities=14% Similarity=0.109 Sum_probs=117.5
Q ss_pred ccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceE
Q 020019 47 RECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAV 126 (332)
Q Consensus 47 pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l 126 (332)
...++++|+|+++++...++.|..++..++.. ... .... .+ -......++++++ ++++++... .+.+
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~----~~~-~~~~-~~-h~~~v~~~~~sp~-g~~l~s~s~-----D~~v 85 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW----ICK-SVLS-EG-HQRTVRKVAWSPC-GNYLASASF-----DATT 85 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEE----EEE-EEEC-SS-CSSCEEEEEECTT-SSEEEEEET-----TSCE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc----eee-eeec-cc-cCCcEEEEEECCC-CCEEEEEEC-----CCcE
Confidence 34789999999888877789888888765531 110 1111 11 0125788999997 664444332 3457
Q ss_pred EEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCC--ceE--EEecCCCCCCcccccCccc
Q 020019 127 AAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG--EFL--SIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 127 ~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g--~~~--~~~~~~~~~~p~~~~~~~~ 202 (332)
..||.++++......+.+. ....+.+++.|+|+++++-+..+.|...+.+. ... ..+.. ....
T Consensus 86 ~iw~~~~~~~~~~~~~~~h---~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~----------h~~~ 152 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGH---ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS----------HTQD 152 (345)
T ss_dssp EEEEECCC-EEEEEEECCC---SSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECC----------CCSC
T ss_pred EEEEccCCCeEEEEEccCC---CCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecC----------cCCC
Confidence 7889877665444445321 24578899999999888888888777766542 211 11211 1123
Q ss_pred cCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 203 LNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 203 ~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
...++++|+|.++++-...+.|..++...+. ......+.+ .......++++++|+++++.
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~----~~~~~~~~~-h~~~v~~l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDTVKLYREEEDD----WVCCATLEG-HESTVWSLAFDPSGQRLASC 212 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEEEETTE----EEEEEEECC-CSSCEEEEEECTTSSEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEecCCC----EEEEEEecC-CCCceEEEEECCCCCEEEEE
Confidence 5689999999555555566777777766541 222223332 33456789999999877775
No 180
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.52 E-value=1.6e-05 Score=72.87 Aligned_cols=181 Identities=16% Similarity=0.217 Sum_probs=107.0
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC----C----cEEEEeCC--CCeEE--EEcCCCceEEEecCC
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE----G----NAYVTDVT--GSKIW--KVGVKGEFLSIISSP 189 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d----G----~lyvtd~~--~~~I~--~v~~~g~~~~~~~~~ 189 (332)
+.+.|++||+ .|+.+..+.. ..+|.+.+-++ | -+|+++.. .++|. .+|++.+.+..+...
T Consensus 48 k~~gL~Vydl-~G~~l~~~~~-------g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~ 119 (355)
T 3amr_A 48 KKSGLVVYSL-DGKMLHSYNT-------GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDP 119 (355)
T ss_dssp TTTEEEEEET-TSCEEEEECC-------SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCT
T ss_pred CCCCEEEEcC-CCcEEEEccC-------CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecccc
Confidence 3468999999 6787765421 35666666552 1 25889988 78664 457664433322211
Q ss_pred CCCCcccccCccccCeEEE--ccC-c--eEEEEeCCCCeEEEEeCC---CCCCccceeEEEEecCCCCCCCCeEEEeCC-
Q 020019 190 LFTPKEWYKNLVGLNGIVY--HPD-G--FLIVIHTFSGNLFKIDIV---DGVGEGEEIKLIRVAGGPLSFGDGLELLSP- 260 (332)
Q Consensus 190 ~~~~p~~~~~~~~~nGi~~--~~d-G--~Lyva~~~~~~i~~id~~---~~~~~~~~~~~v~~~g~~~~~pdGi~~~~d- 260 (332)
. .|. ......|.|||+ +++ | ++||++.. +++..+++. .++...+.++.+.++ +.|.|+++|+.
T Consensus 120 ~--~pv-~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lg----sq~EgcvvDd~~ 191 (355)
T 3amr_A 120 D--HPI-ATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMN----SQTEGMAADDEY 191 (355)
T ss_dssp T--SCE-ECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECS----SCEEEEEEETTT
T ss_pred c--cCc-CCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCC----CCcceEEEcCCC
Confidence 0 010 012367899999 764 4 58887765 788776653 333333356666655 46889999975
Q ss_pred CeEEEEeC-CceEEEEcC-CCceEEEEEeeecCCCcc-cceEEEE-EC----CeEEEEEecCcccc
Q 020019 261 TKLVVAGN-PSARLVESS-DGWETAAVVAKFSGPVHR-LATAATV-KD----GRVYLNHMLGFGYP 318 (332)
Q Consensus 261 G~l~va~~-~~~~~v~~~-dg~~~~~~~~~~~~~~~~-~pt~va~-~~----g~lyv~~~~g~~~~ 318 (332)
|.||+++. ..+|.+... ++-.+.+++..+..+.+. -+.++++ .. +.|++++.-...+.
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~ 257 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYA 257 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEE
Confidence 99999975 445654422 211233555544433343 5788988 33 46777765544433
No 181
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.51 E-value=0.00012 Score=66.22 Aligned_cols=191 Identities=13% Similarity=0.079 Sum_probs=117.4
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCC--CCeEEEEEeCcCCCcc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHP--RNRLLVVAADVFGNKY 123 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~--~g~l~v~~~~~~~~~~ 123 (332)
....++++++++.+++...++.|..++..+... +....+. + -......+++.++ ...|+.+.. .
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~--~-h~~~v~~~~~~~~~~~~~l~s~~~------d 78 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-----KLIDTLT--G-HEGPVWRVDWAHPKFGTILASCSY------D 78 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-----EEEEEEC--C-CSSCEEEEEECCGGGCSEEEEEET------T
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc-----eeeeEec--C-CCCcEEEEEeCCCCCCCEEEEecc------C
Confidence 456789999999888777789888888753321 1001111 1 0125678888753 234444443 3
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC--CcEEEEeCCCCeEEEEcCCCc---eEEEecCCCCCCccccc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE--GNAYVTDVTGSKIWKVGVKGE---FLSIISSPLFTPKEWYK 198 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d--G~lyvtd~~~~~I~~v~~~g~---~~~~~~~~~~~~p~~~~ 198 (332)
+.|..||.++++......+.. .......+++.++ |+++++-+..+.|..++.... .......
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~---------- 145 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAV---HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA---------- 145 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECC---CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC----------
T ss_pred CEEEEEEcCCCceeEeeeecC---CCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC----------
Confidence 568899998887444444421 1356788999999 888888788888888886532 1111111
Q ss_pred CccccCeEEEcc-------------CceEEEEeCCCCeEEEEeCCCCCCccceeEEE-EecCCCCCCCCeEEEeCC---C
Q 020019 199 NLVGLNGIVYHP-------------DGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLI-RVAGGPLSFGDGLELLSP---T 261 (332)
Q Consensus 199 ~~~~~nGi~~~~-------------dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v-~~~g~~~~~pdGi~~~~d---G 261 (332)
.......++++| ++.++++-...+.|..+++.++.. ....+ ... ........+++.++ +
T Consensus 146 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~-~h~~~v~~~~~sp~~~~~ 221 (379)
T 3jrp_A 146 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ---TYVLESTLE-GHSDWVRDVAWSPTVLLR 221 (379)
T ss_dssp CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT---EEEEEEEEC-CCSSCEEEEEECCCCSSS
T ss_pred CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc---ceeeEEEEe-cccCcEeEEEECCCCCCC
Confidence 112356888998 675555556677888888775521 11111 222 12245678999998 7
Q ss_pred eEEEEe
Q 020019 262 KLVVAG 267 (332)
Q Consensus 262 ~l~va~ 267 (332)
+++++.
T Consensus 222 ~~l~s~ 227 (379)
T 3jrp_A 222 SYLASV 227 (379)
T ss_dssp EEEEEE
T ss_pred CeEEEE
Confidence 877775
No 182
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.50 E-value=1e-05 Score=76.32 Aligned_cols=204 Identities=10% Similarity=0.054 Sum_probs=124.3
Q ss_pred cccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
....++|+|. ++++.+...+|.|..++..+++. . ......+ -.....+|++.|.++.++++... .+
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-----~--~~~~~~g-H~~~V~~l~f~p~~~~~l~s~s~-----D~ 187 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-----P--TFIKGIG-AGGSITGLKFNPLNTNQFYASSM-----EG 187 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-----C--EEECCCS-SSCCCCEEEECSSCTTEEEEECS-----SS
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-----e--eEEEccC-CCCCEEEEEEeCCCCCEEEEEeC-----CC
Confidence 4567999984 56776667789999999876652 1 2221111 01257899999754554444332 35
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccC
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
.|..||.+++........ .........++++++|+++++-...+.|..++.+++....+.. .....+
T Consensus 188 ~v~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~----------h~~~v~ 254 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASS---DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRM----------HKKKVT 254 (435)
T ss_dssp CEEEEETTSCEEEEEECC---SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBC----------CSSCEE
T ss_pred EEEEeeccCCceeEEecc---CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEec----------ccceEE
Confidence 688999987654433222 1112345679999999988888888999999988764321110 122457
Q ss_pred eEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEEEcCCC
Q 020019 205 GIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLVESSDG 279 (332)
Q Consensus 205 Gi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~~dg 279 (332)
.|+|+|++ .++++-...+.|..+|+...+. ........ ........+++.++|+.+++.. +.+++....++
T Consensus 255 ~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~---~~~~~~~~-~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 255 HVALNPCCDWFLATASVDQTVKIWDLRQVRG---KASFLYSL-PHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp EEEECTTCSSEEEEEETTSBCCEEETTTCCS---SSCCSBCC-BCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred eeeecCCCceEEEEecCcceeeEEecccccc---cceEEEee-eccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 89999998 6777767777787788875421 11111111 1122345677888887777642 33343344444
No 183
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.49 E-value=4.5e-05 Score=72.08 Aligned_cols=230 Identities=9% Similarity=0.024 Sum_probs=135.4
Q ss_pred cccceEEcCCCCEE-EEEecCCeEEEEECC--CCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 46 FRECAKWDDSGRRF-IVSFLDGGIGQVAVP--DDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 46 ~pegia~d~~g~~~-~~~~~~g~I~~vd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
...+++++++|+.+ ++...++.|..++.. +++. .. .+... . ....+..++++++...|+++..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~----~~--~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~------ 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV----LK--LRKRF-C-FSKRPNAISIAEDDTTVIIADK------ 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC----EE--EEEEE-E-CSSCEEEEEECTTSSEEEEEET------
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce----ee--eeecc-c-CCCCceEEEEcCCCCEEEEEeC------
Confidence 35679999999986 555678988888876 5552 12 22110 1 1125789999997334444443
Q ss_pred cceEEEEECCCCcEEE--EEecCCCCCCCCCccceEECCC---CcEEEEeCCCCeEEEEcCC-CceEEE-ecCCCCCCcc
Q 020019 123 YSAVAAYDLSTWNRLF--LTQLSGPSDGKSCADDVTVDAE---GNAYVTDVTGSKIWKVGVK-GEFLSI-ISSPLFTPKE 195 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~--~~~l~~~~~~~~~~ndiavd~d---G~lyvtd~~~~~I~~v~~~-g~~~~~-~~~~~~~~p~ 195 (332)
.+.++.|+..+++... ...+.+ .....+.+++.|+ |+++++-+..+.|..++.. ++.... ...
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~---h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~------- 239 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILG---HVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG------- 239 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEE---CSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC-------
T ss_pred CCcEEEEecCCcccccccceeeec---ccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC-------
Confidence 3568899987765421 001111 1245778999999 8877777777888877754 443322 211
Q ss_pred cccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecC----------------------CCCCCCC
Q 020019 196 WYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAG----------------------GPLSFGD 253 (332)
Q Consensus 196 ~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g----------------------~~~~~pd 253 (332)
.......++|+ ||.++++-...++|..+++.+++ .+..+.... ..-....
T Consensus 240 ---h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (450)
T 2vdu_B 240 ---HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK----NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVS 311 (450)
T ss_dssp ---CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC----EEEEEECHHHHGGGCCTTSBC----------CBCCCEE
T ss_pred ---CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc----EeeeecchhhhhhhhhhcccccccccccccccceEEEE
Confidence 11345789999 98444455577889999998773 344444210 0012345
Q ss_pred eEEEeCCCeEEEE-e-CCc-eEEEEc--CCCceEEEEEeeecCCCcccceEEEEECCeEEEE
Q 020019 254 GLELLSPTKLVVA-G-NPS-ARLVES--SDGWETAAVVAKFSGPVHRLATAATVKDGRVYLN 310 (332)
Q Consensus 254 Gi~~~~dG~l~va-~-~~~-~~~v~~--~dg~~~~~~~~~~~~~~~~~pt~va~~~g~lyv~ 310 (332)
++++.++|+++++ . ... ..+... ..++.. +....+... ..+.++++..+.+|++
T Consensus 312 ~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l-~~~~~~~~~--~~v~~~~~~~~~~~v~ 370 (450)
T 2vdu_B 312 KIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDL-ALKQIITFP--YNVISLSAHNDEFQVT 370 (450)
T ss_dssp EEEECSSSSEEEEEETTCSEEEEEEECSSSTTCE-EEEEEEECS--SCEEEEEEETTEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEeccCCCCce-eeccEeccC--CceEEEEecCCcEEEE
Confidence 7888888775555 3 222 333333 333222 333444332 4567888866777774
No 184
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.48 E-value=9.2e-05 Score=68.53 Aligned_cols=192 Identities=15% Similarity=0.063 Sum_probs=122.2
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++++.+++...++.|..++..+++. .. .+.... .....++++++ ++++++... .+.
T Consensus 141 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~----~~--~~~~h~----~~v~~~~~~~~-~~~l~s~~~-----d~~ 204 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSSQDMQLKIWSVKDGSN----PR--TLIGHR----ATVTDIAIIDR-GRNVLSASL-----DGT 204 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCC----CE--EEECCS----SCEEEEEEETT-TTEEEEEET-----TSC
T ss_pred ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC----ce--EEcCCC----CcEEEEEEcCC-CCEEEEEcC-----CCc
Confidence 556789999999888777789999999887653 11 232111 25788999997 554444332 356
Q ss_pred EEEEECCCCcEEEEEecCC-CCC------------------CCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEE
Q 020019 126 VAAYDLSTWNRLFLTQLSG-PSD------------------GKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSI 185 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~-~~~------------------~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~ 185 (332)
+..||.++++......... +.. .......++++++|+.+++-...+.|..+|.. ++....
T Consensus 205 v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 205 IRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQ 284 (420)
T ss_dssp EEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEE
Confidence 8899999887766554311 000 01345567788999887877778888888875 333322
Q ss_pred ecCCCCCCcccccCccccCeEEEccCce-EEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEE
Q 020019 186 ISSPLFTPKEWYKNLVGLNGIVYHPDGF-LIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLV 264 (332)
Q Consensus 186 ~~~~~~~~p~~~~~~~~~nGi~~~~dG~-Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~ 264 (332)
.... .......++++|+|. ++++-...+.|..+++.+++. .+..+... .-.....+.. ++|+++
T Consensus 285 ~~~~---------~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~---~~~~~~~~--~~~~v~~~~~-~~~~~l 349 (420)
T 3vl1_A 285 LPSK---------FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC---PVGEFLIN--EGTPINNVYF-AAGALF 349 (420)
T ss_dssp ECCT---------TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS---CSEEEEES--TTSCEEEEEE-ETTEEE
T ss_pred cccc---------cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC---chhhhhcc--CCCCceEEEe-CCCCEE
Confidence 2111 113467899999994 777777889999999987631 34444432 1123344544 466666
Q ss_pred EEeC
Q 020019 265 VAGN 268 (332)
Q Consensus 265 va~~ 268 (332)
++..
T Consensus 350 ~s~~ 353 (420)
T 3vl1_A 350 VSSG 353 (420)
T ss_dssp EEET
T ss_pred EEec
Confidence 6653
No 185
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.47 E-value=0.0001 Score=74.42 Aligned_cols=199 Identities=9% Similarity=-0.013 Sum_probs=128.2
Q ss_pred CCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCe-EEEEEeCcCCC
Q 020019 43 SSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR-LLVVAADVFGN 121 (332)
Q Consensus 43 ~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~-l~v~~~~~~~~ 121 (332)
......+++|+++|+.+++...+|.|..++..+++. .. .+.... .....++++++ +. |.++..
T Consensus 54 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~----~~--~~~~~~----~~v~~~~~s~~-~~~l~~~~~----- 117 (814)
T 3mkq_A 54 TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK----VV--DFEAHP----DYIRSIAVHPT-KPYVLSGSD----- 117 (814)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE----EE--EEECCS----SCEEEEEECSS-SSEEEEEET-----
T ss_pred CCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE----EE--EEecCC----CCEEEEEEeCC-CCEEEEEcC-----
Confidence 333557899999999888877789999999877652 11 222111 25788999997 55 444433
Q ss_pred ccceEEEEECCCCc-EEEEEecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCccccc
Q 020019 122 KYSAVAAYDLSTWN-RLFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 122 ~~~~l~~~d~~~g~-~~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~ 198 (332)
.+.+..||.+++. ......- .......+++.| +|+.+++-+..+.|..++.. ++........
T Consensus 118 -dg~i~vw~~~~~~~~~~~~~~-----~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~--------- 182 (814)
T 3mkq_A 118 -DLTVKLWNWENNWALEQTFEG-----HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG--------- 182 (814)
T ss_dssp -TSEEEEEEGGGTSEEEEEEEC-----CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECC---------
T ss_pred -CCEEEEEECCCCceEEEEEcC-----CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecC---------
Confidence 3578899998763 3322221 124567899999 78888888888888888865 3322211111
Q ss_pred CccccCeEEEcc--CceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEE
Q 020019 199 NLVGLNGIVYHP--DGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLV 274 (332)
Q Consensus 199 ~~~~~nGi~~~~--dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v 274 (332)
.....+.+++++ +|.++++-...++|..++..++ ..+..+.. .......+++.++|.++++.. +..++.
T Consensus 183 ~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~----~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~v~vw 255 (814)
T 3mkq_A 183 QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK----SCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGTLKIW 255 (814)
T ss_dssp CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT----EEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC----cEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 113467899998 8855666667889999998876 23443432 224566889999988766652 334444
Q ss_pred EcCCC
Q 020019 275 ESSDG 279 (332)
Q Consensus 275 ~~~dg 279 (332)
....+
T Consensus 256 d~~~~ 260 (814)
T 3mkq_A 256 NSSTY 260 (814)
T ss_dssp ETTTC
T ss_pred ECCCC
Confidence 44545
No 186
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.47 E-value=7.5e-05 Score=72.56 Aligned_cols=196 Identities=11% Similarity=0.050 Sum_probs=122.8
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCC----CCCccceeeeEEecccCcCCCc-cceEEEeC--CCCeEEEEEeCc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDD----YPPGTVLEEVTLVKDLELTGNG-SLGLVLDH--PRNRLLVVAADV 118 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~gi~vd~--~~g~l~v~~~~~ 118 (332)
.+..++++++|+++++.. ++.|..++..++ +. .. .+.... .. +..+++++ + ++++++...
T Consensus 20 ~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~----~~--~~~~h~----~~~v~~~~~sp~~~-~~~l~s~~~- 86 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPP----VV--QFTGHG----SSVVTTVKFSPIKG-SQYLCSGDE- 86 (615)
T ss_dssp CCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCS----EE--EECTTT----TSCEEEEEECSSTT-CCEEEEEET-
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEECCCCCCcccc----ce--EEecCC----CceEEEEEECcCCC-CCEEEEecC-
Confidence 567899999999776655 688999998766 31 11 232111 25 78999999 8 554444332
Q ss_pred CCCccceEEEEECCCC------cEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCC----CeEEEEcCCCceEEEecC
Q 020019 119 FGNKYSAVAAYDLSTW------NRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTG----SKIWKVGVKGEFLSIISS 188 (332)
Q Consensus 119 ~~~~~~~l~~~d~~~g------~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~----~~I~~v~~~g~~~~~~~~ 188 (332)
.+.+.+||.+++ +......+.. .......+++.|+|+.+++-... +.|+.++. ++....+..
T Consensus 87 ----dg~v~vw~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~-~~~~~~~~~ 158 (615)
T 1pgu_A 87 ----SGKVIVWGWTFDKESNSVEVNVKSEFQV---LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS-GNSLGEVSG 158 (615)
T ss_dssp ----TSEEEEEEEEEEGGGTEEEEEEEEEEEC---CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT-CCEEEECCS
T ss_pred ----CCEEEEEeCCCCcccccccccccchhhc---ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC-CCcceeeec
Confidence 356889998755 3333333321 13467889999999865554433 67888873 343332211
Q ss_pred CCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCC---CCCeEEEeCC-CeE
Q 020019 189 PLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLS---FGDGLELLSP-TKL 263 (332)
Q Consensus 189 ~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~---~pdGi~~~~d-G~l 263 (332)
.......++|+|++ .++++-...+.|..++..++ +.+..+.. ... ....+++.++ |++
T Consensus 159 ----------~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~----~~~~~~~~---~~~~~~~v~~~~~~~~~~~~ 221 (615)
T 1pgu_A 159 ----------HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF----KFSASDRT---HHKQGSFVRDVEFSPDSGEF 221 (615)
T ss_dssp ----------CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB----EEEEEECS---SSCTTCCEEEEEECSTTCCE
T ss_pred ----------CCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc----ceeeeecc---cCCCCceEEEEEECCCCCCE
Confidence 11346789999999 47777777889999998765 23333332 222 4568899999 887
Q ss_pred EEEe--CCceEEEEcCCC
Q 020019 264 VVAG--NPSARLVESSDG 279 (332)
Q Consensus 264 ~va~--~~~~~~v~~~dg 279 (332)
+++. ....++....++
T Consensus 222 l~~~~~dg~i~vwd~~~~ 239 (615)
T 1pgu_A 222 VITVGSDRKISCFDGKSG 239 (615)
T ss_dssp EEEEETTCCEEEEETTTC
T ss_pred EEEEeCCCeEEEEECCCC
Confidence 7764 333444455666
No 187
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.47 E-value=0.00027 Score=75.09 Aligned_cols=231 Identities=13% Similarity=0.043 Sum_probs=140.2
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCC-CeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPR-NRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~-g~l~v~~~~~~~~~~~ 124 (332)
....++++++|+.+++...++.|..++..+++. .. .+... ......+++.++. +.++++.. ..+
T Consensus 659 ~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~----~~--~~~~~----~~~v~~~~~~~~~~~~~l~sg~-----~d~ 723 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSADKKVKIWDSATGKL----VH--TYDEH----SEQVNCCHFTNKSNHLLLATGS-----NDF 723 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----EE--EEECC----SSCEEEEEECSSSSCCEEEEEE-----TTS
T ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEECCCCce----EE--EEcCC----CCcEEEEEEecCCCceEEEEEe-----CCC
Confidence 445789999999888777789999999887752 11 23211 1256788888753 33333332 245
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCC-Ccc--cccCc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFT-PKE--WYKNL 200 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~-~p~--~~~~~ 200 (332)
.+..||.++++......- .....+.+++.|+|+.+++-+..+.|..++.. ++........... ... .....
T Consensus 724 ~v~vwd~~~~~~~~~~~~-----h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1249)
T 3sfz_A 724 FLKLWDLNQKECRNTMFG-----HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVE 798 (1249)
T ss_dssp CEEEEETTSSSEEEEECC-----CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCC
T ss_pred eEEEEECCCcchhheecC-----CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCcccccc
Confidence 689999998886543321 13467889999999988888888888888865 3333222211110 000 00112
Q ss_pred cccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEEEcC
Q 020019 201 VGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLVESS 277 (332)
Q Consensus 201 ~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~~ 277 (332)
.....+++++|| .+.++. .+.+..++..++. ....+... .......+++.++|+++++.. ....+....
T Consensus 799 ~~v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~~----~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~ 870 (1249)
T 3sfz_A 799 VIVKCCSWSADGDKIIVAA--KNKVLLFDIHTSG----LLAEIHTG--HHSTIQYCDFSPYDHLAVIALSQYCVELWNID 870 (1249)
T ss_dssp CCBCCCCBCTTSSEEEEEE--TTEEEEEETTTCC----EEEEEECS--SSSCCCEEEECSSTTEEEEECSSSCEEEEETT
T ss_pred ceEEEEEECCCCCEEEEEc--CCcEEEEEecCCC----ceeEEcCC--CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcC
Confidence 356789999999 666654 5789999988762 34333322 335677899999988877753 233444455
Q ss_pred CCceEEEEEeeecCCCcccceEEEE-ECCeEEE
Q 020019 278 DGWETAAVVAKFSGPVHRLATAATV-KDGRVYL 309 (332)
Q Consensus 278 dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv 309 (332)
++ . ....+.. .....+++++ .+++.++
T Consensus 871 ~~-~---~~~~~~~-h~~~v~~v~~spdg~~l~ 898 (1249)
T 3sfz_A 871 SR-L---KVADCRG-HLSWVHGVMFSPDGSSFL 898 (1249)
T ss_dssp TT-E---EEEEECC-CSSCEEEEEECTTSSEEE
T ss_pred CC-c---eeeecCC-CccceEEEEECCCCCEEE
Confidence 55 2 2222221 1233466777 4554444
No 188
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.46 E-value=2.5e-06 Score=82.72 Aligned_cols=116 Identities=18% Similarity=0.270 Sum_probs=80.9
Q ss_pred ccceEEEeCCCCeEEEEEeCcCC----------------CccceEEEEECCCC-----cEEEEEec-CC-CC--------
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFG----------------NKYSAVAAYDLSTW-----NRLFLTQL-SG-PS-------- 146 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~----------------~~~~~l~~~d~~~g-----~~~~~~~l-~~-~~-------- 146 (332)
.|-+++++|.+|.+|++...... ++.+.|++|..+.+ +..+.+-+ .+ |.
T Consensus 385 RpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~~ 464 (592)
T 4a9v_A 385 RPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp CEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred CccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccccc
Confidence 47899999988999999754211 23578999976432 22222111 11 10
Q ss_pred --------CCCCCccceEECCCCcEEE-EeCC-----------CCeEEEEcCC-CceEEEecCCCCCCcccccCccccCe
Q 020019 147 --------DGKSCADDVTVDAEGNAYV-TDVT-----------GSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNG 205 (332)
Q Consensus 147 --------~~~~~~ndiavd~dG~lyv-td~~-----------~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nG 205 (332)
.....|++|++|++|+||| ||.. ++.||+++++ |++.+++..+. ...+||
T Consensus 465 g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~---------~aEpnG 535 (592)
T 4a9v_A 465 GSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI---------GCEVTG 535 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT---------TCEEEE
T ss_pred CccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC---------CccccC
Confidence 1236899999999999999 8863 4489999995 78777764332 345899
Q ss_pred EEEccCc-eEEEEeCCCC
Q 020019 206 IVYHPDG-FLIVIHTFSG 222 (332)
Q Consensus 206 i~~~~dG-~Lyva~~~~~ 222 (332)
++|+||+ +|||+-+.-+
T Consensus 536 iafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 536 ISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp EEECTTSSEEEEEEESTT
T ss_pred CEECCCCCEEEEEEeCCC
Confidence 9999999 9999977555
No 189
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.46 E-value=3.5e-05 Score=76.95 Aligned_cols=190 Identities=11% Similarity=0.117 Sum_probs=106.1
Q ss_pred ccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccce-eeeEEecccCc-------------CCCccceEEEeCCCCeEE
Q 020019 47 RECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVL-EEVTLVKDLEL-------------TGNGSLGLVLDHPRNRLL 112 (332)
Q Consensus 47 pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~gi~vd~~~g~l~ 112 (332)
+.++.|. |+.|+....++ | .+|..+++. . . .+...... ....+..++++++ +++.
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~----~~~--~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~ 96 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKS----AQT--TRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVV 96 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-----------C--EEEEHHHHHTTC-----------CCCEEEEETTT-TEEE
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcE----eeE--EeechhHhhhhccchhccccccccCceeEEECCC-CeEE
Confidence 3557888 55555544444 8 999887762 0 1 22221110 0024678999997 7776
Q ss_pred EEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCCC------ceEEE
Q 020019 113 VVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVKG------EFLSI 185 (332)
Q Consensus 113 v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~g------~~~~~ 185 (332)
++.. +.+++||.++++....... ......+++.|||+ |+++ ..+.|+.++.++ +...+
T Consensus 97 ~~~~-------~~i~~~d~~~~~~~~l~~~------~~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~g~~~~~ 161 (706)
T 2z3z_A 97 LFTQ-------GGLVGFDMLARKVTYLFDT------NEETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGMSRAIAV 161 (706)
T ss_dssp EEET-------TEEEEEETTTTEEEEEECC------TTCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCCCCCEES
T ss_pred EEEC-------CEEEEEECCCCceEEccCC------cccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccCCCcEEe
Confidence 6642 4789999998876543322 23467899999996 4444 357888888653 44332
Q ss_pred ecCCCCC----CcccccCccccCeEEEccCc-eEEEEeC--------------------------------CCCeEEEEe
Q 020019 186 ISSPLFT----PKEWYKNLVGLNGIVYHPDG-FLIVIHT--------------------------------FSGNLFKID 228 (332)
Q Consensus 186 ~~~~~~~----~p~~~~~~~~~nGi~~~~dG-~Lyva~~--------------------------------~~~~i~~id 228 (332)
....... .+..........+++|+||| .|+++.. ...+|+.++
T Consensus 162 ~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 241 (706)
T 2z3z_A 162 TIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH 241 (706)
T ss_dssp CSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE
T ss_pred ccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE
Confidence 2111000 00000112235899999999 7777752 335688888
Q ss_pred CCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEe
Q 020019 229 IVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAG 267 (332)
Q Consensus 229 ~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~ 267 (332)
++++ ....+.........+..+++.+||+ |+++.
T Consensus 242 ~~~~-----~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 242 LATG-----KTVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp TTTT-----EEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCC-----ceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 8866 2322222101113355788999987 55543
No 190
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.46 E-value=0.00054 Score=61.50 Aligned_cols=205 Identities=11% Similarity=-0.024 Sum_probs=125.3
Q ss_pred ecCCccccceEEcCCC-CEEEEEecCCeEEEEECCCCCCCccceee-eEEecccCcCCCccceEEEeCCCCeEEEEEeCc
Q 020019 41 HSSSFFRECAKWDDSG-RRFIVSFLDGGIGQVAVPDDYPPGTVLEE-VTLVKDLELTGNGSLGLVLDHPRNRLLVVAADV 118 (332)
Q Consensus 41 ~~~~~~pegia~d~~g-~~~~~~~~~g~I~~vd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~ 118 (332)
.+.......+++.+++ +++++...++.|..++..+.... .... ..+.... .....+++.++ +++.++...
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~--~~~~~~~~~~h~----~~v~~~~~s~d-g~~l~s~s~- 85 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK--FGVPVRSFKGHS----HIVQDCTLTAD-GAYALSASW- 85 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE--EEEEEEEEECCS----SCEEEEEECTT-SSEEEEEET-
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc--ccccceEEeCCc----ccEEEEEECCC-CCEEEEEeC-
Confidence 3433355678999865 67777777898888876432210 0000 0111111 25678999997 664444332
Q ss_pred CCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCccccc
Q 020019 119 FGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 119 ~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~ 198 (332)
.+.+.+||.++++....+.- . ......++++++++++++-+..+.|...+.+++....+...
T Consensus 86 ----D~~v~~wd~~~~~~~~~~~~--h---~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h--------- 147 (319)
T 3frx_A 86 ----DKTLRLWDVATGETYQRFVG--H---KSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGH--------- 147 (319)
T ss_dssp ----TSEEEEEETTTTEEEEEEEC--C---SSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCC---------
T ss_pred ----CCEEEEEECCCCCeeEEEcc--C---CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEecc---------
Confidence 35788999999886654331 1 24567899999999999888889888888877644332111
Q ss_pred CccccCeEEEcc------CceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--Cc
Q 020019 199 NLVGLNGIVYHP------DGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PS 270 (332)
Q Consensus 199 ~~~~~nGi~~~~------dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~ 270 (332)
......+++.| ++.++++-...+.|..+++...+ ....+ .+ .......+++.++|+++++.. ..
T Consensus 148 -~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~----~~~~~--~~-h~~~v~~~~~sp~g~~l~s~~~dg~ 219 (319)
T 3frx_A 148 -NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ----IEADF--IG-HNSNINTLTASPDGTLIASAGKDGE 219 (319)
T ss_dssp -SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE----EEEEE--CC-CCSCEEEEEECTTSSEEEEEETTCE
T ss_pred -CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch----hheee--cC-CCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 11234566666 34456666677888888888651 22222 21 224566899999998887753 33
Q ss_pred eEEEEcCCC
Q 020019 271 ARLVESSDG 279 (332)
Q Consensus 271 ~~~v~~~dg 279 (332)
.++-....+
T Consensus 220 i~iwd~~~~ 228 (319)
T 3frx_A 220 IMLWNLAAK 228 (319)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 444445555
No 191
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.45 E-value=0.00031 Score=63.69 Aligned_cols=197 Identities=10% Similarity=0.061 Sum_probs=120.5
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....+++++++.++++...++.|..+|..+++. .. .+.... .....++++++ ++.+++... .+.
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~----~~--~~~~h~----~~v~~v~~sp~-~~~l~s~~~-----d~~ 141 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTT----YK--RFVGHQ----SEVYSVAFSPD-NRQILSAGA-----ERE 141 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCE----EE--EEECCC----SCEEEEEECSS-TTEEEEEET-----TSC
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcE----EE--EEcCCC----CcEEEEEECCC-CCEEEEEcC-----CCE
Confidence 445789999999888778899999999876652 11 232211 25688999997 654444332 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCC----------cEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEG----------NAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKE 195 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG----------~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~ 195 (332)
+..||... +....... ..........+++.|++ ..+++-+..+.|..++..++....+..
T Consensus 142 i~~wd~~~-~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------- 211 (343)
T 2xzm_R 142 IKLWNILG-ECKFSSAE--KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKA------- 211 (343)
T ss_dssp EEEEESSS-CEEEECCT--TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEEC-------
T ss_pred EEEEeccC-Cceeeeec--ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcC-------
Confidence 88999874 32221111 01112345667777765 577777778888888866554332211
Q ss_pred cccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe-CCceEEE
Q 020019 196 WYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG-NPSARLV 274 (332)
Q Consensus 196 ~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~-~~~~~~v 274 (332)
.....+.++|+|||.+.++-...+.|..+|+.... .....+... .....+++.+++.++.+. ....++.
T Consensus 212 ---h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~---~~~~~~~~~----~~v~~v~~sp~~~~la~~~d~~v~iw 281 (343)
T 2xzm_R 212 ---HESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT---YPQREFDAG----STINQIAFNPKLQWVAVGTDQGVKIF 281 (343)
T ss_dssp ---CSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS---SCSEEEECS----SCEEEEEECSSSCEEEEEESSCEEEE
T ss_pred ---ccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc---ccceeecCC----CcEEEEEECCCCCEEEEECCCCEEEE
Confidence 11235789999999666666678889888885331 123333222 235688999998877665 3334433
Q ss_pred EcCC
Q 020019 275 ESSD 278 (332)
Q Consensus 275 ~~~d 278 (332)
....
T Consensus 282 ~~~~ 285 (343)
T 2xzm_R 282 NLMT 285 (343)
T ss_dssp ESSS
T ss_pred EeCC
Confidence 4333
No 192
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.45 E-value=0.00012 Score=67.27 Aligned_cols=192 Identities=14% Similarity=0.095 Sum_probs=103.3
Q ss_pred CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCC
Q 020019 55 SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTW 134 (332)
Q Consensus 55 ~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g 134 (332)
++.+|+.+ .++.|+.+|..+++. .|...... .......++. +++|+... .+.|+.||.++|
T Consensus 103 ~~~v~v~~-~~g~l~a~d~~tG~~--------~W~~~~~~--~~~~~p~~~~--~~v~v~~~------~g~l~~~d~~tG 163 (376)
T 3q7m_A 103 GGHVYIGS-EKAQVYALNTSDGTV--------AWQTKVAG--EALSRPVVSD--GLVLIHTS------NGQLQALNEADG 163 (376)
T ss_dssp TTEEEEEE-TTSEEEEEETTTCCE--------EEEEECSS--CCCSCCEEET--TEEEEECT------TSEEEEEETTTC
T ss_pred CCEEEEEc-CCCEEEEEECCCCCE--------EEEEeCCC--ceEcCCEEEC--CEEEEEcC------CCeEEEEECCCC
Confidence 45555544 468999999987762 23321111 0111224443 78998764 357999999999
Q ss_pred cEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCcc-ccCeEEEccCc
Q 020019 135 NRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLV-GLNGIVYHPDG 212 (332)
Q Consensus 135 ~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~-~~nGi~~~~dG 212 (332)
+..+......+..........+++ +|.+|+.. ..+.|+.+++. |+.................... .....++ .++
T Consensus 164 ~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~-~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~ 240 (376)
T 3q7m_A 164 AVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGG-DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNG 240 (376)
T ss_dssp CEEEEEECCC-----CCCCCCEEE-TTEEEECC-TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE-ETT
T ss_pred cEEEEEeCCCCceeecCCCCcEEE-CCEEEEEc-CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE-ECC
Confidence 988877663221101111234444 56788863 46889999975 6654322211000000000000 0011122 257
Q ss_pred eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC-ceEEEEcCCC
Q 020019 213 FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP-SARLVESSDG 279 (332)
Q Consensus 213 ~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~-~~~~v~~~dg 279 (332)
.+|+... .+.|+.+++.+++ ..-.... ....++.++ ++++|++... ....+...+|
T Consensus 241 ~v~~~~~-~g~l~~~d~~tG~----~~w~~~~-----~~~~~~~~~-~~~l~~~~~~g~l~~~d~~tG 297 (376)
T 3q7m_A 241 VVFALAY-NGNLTALDLRSGQ----IMWKREL-----GSVNDFIVD-GNRIYLVDQNDRVMALTIDGG 297 (376)
T ss_dssp EEEEECT-TSCEEEEETTTCC----EEEEECC-----CCEEEEEEE-TTEEEEEETTCCEEEEETTTC
T ss_pred EEEEEec-CcEEEEEECCCCc----EEeeccC-----CCCCCceEE-CCEEEEEcCCCeEEEEECCCC
Confidence 8998864 6689999998872 2222221 233456565 6899999754 4444555677
No 193
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.44 E-value=0.00017 Score=76.74 Aligned_cols=207 Identities=11% Similarity=0.033 Sum_probs=132.1
Q ss_pred EEEecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeC
Q 020019 38 YHYHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAAD 117 (332)
Q Consensus 38 i~~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~ 117 (332)
+.+.+......+++++++|+++++...+|.|..++..+++. .. ++... ...+..++++++ |++.++...
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~----~~--~~~~h----~~~v~~~~~s~~-~~~l~s~~~ 677 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK----LL--DIKAH----EDEVLCCAFSSD-DSYIATCSA 677 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EE--EECCC----SSCEEEEEECTT-SSEEEEEET
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCE----EE--EeccC----CCCEEEEEEecC-CCEEEEEeC
Confidence 44444444566789999999888777789999999887652 11 22211 125789999997 664544432
Q ss_pred cCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC--CcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCc
Q 020019 118 VFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE--GNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPK 194 (332)
Q Consensus 118 ~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d--G~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p 194 (332)
.+.+.+||.++++......- . ......+++.++ +.++++-+..+.|..++.. ++....+..
T Consensus 678 -----d~~v~vwd~~~~~~~~~~~~--~---~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~------ 741 (1249)
T 3sfz_A 678 -----DKKVKIWDSATGKLVHTYDE--H---SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG------ 741 (1249)
T ss_dssp -----TSEEEEEETTTCCEEEEEEC--C---SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC------
T ss_pred -----CCeEEEEECCCCceEEEEcC--C---CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC------
Confidence 35799999999887655432 1 245677889885 4577787788888888866 443322211
Q ss_pred ccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecC----------CCCCCCCeEEEeCCCeEE
Q 020019 195 EWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAG----------GPLSFGDGLELLSPTKLV 264 (332)
Q Consensus 195 ~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g----------~~~~~pdGi~~~~dG~l~ 264 (332)
.....+.++++|+|.+.++-...+.|..+++.++. ....+.... ........+++.++|+.+
T Consensus 742 ----h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 813 (1249)
T 3sfz_A 742 ----HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSAN----ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKI 813 (1249)
T ss_dssp ----CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTE----EEEEEECCCCC--------CCCCCBCCCCBCTTSSEE
T ss_pred ----CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCc----ccceecccccccccCCccccccceEEEEEECCCCCEE
Confidence 11245789999999555566677889888887652 333333210 001135567888998877
Q ss_pred EEe-CCceEEEEcCCC
Q 020019 265 VAG-NPSARLVESSDG 279 (332)
Q Consensus 265 va~-~~~~~~v~~~dg 279 (332)
++. .+...+.....+
T Consensus 814 ~~~~~~~v~~~d~~~~ 829 (1249)
T 3sfz_A 814 IVAAKNKVLLFDIHTS 829 (1249)
T ss_dssp EEEETTEEEEEETTTC
T ss_pred EEEcCCcEEEEEecCC
Confidence 665 444444455555
No 194
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.44 E-value=1.2e-05 Score=73.54 Aligned_cols=237 Identities=6% Similarity=-0.036 Sum_probs=124.9
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++|+++++...++.|..++..++... ... .+... ......+++.++ ++++++... .+.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~--~~~--~~~~h----~~~v~~~~~s~~-~~~l~s~s~-----d~~ 78 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWK--HAR--TFSDH----DKIVTCVDWAPK-SNRIVTCSQ-----DRN 78 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEE--ECC--CBCCC----SSCEEEEEECTT-TCCEEEEET-----TSS
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceE--EEE--EEecC----CceEEEEEEeCC-CCEEEEEeC-----CCe
Confidence 4578999999997776666788877777655210 001 12111 125788999997 554444331 356
Q ss_pred EEEEECCCCc-EEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCce----EEEecCCCCCCcccccCc
Q 020019 126 VAAYDLSTWN-RLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEF----LSIISSPLFTPKEWYKNL 200 (332)
Q Consensus 126 l~~~d~~~g~-~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~----~~~~~~~~~~~p~~~~~~ 200 (332)
+.+||.++++ ......+.. .......+++.|+|+.+++-+..+.|..++.+... ...+..+ ..
T Consensus 79 v~vwd~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---------h~ 146 (377)
T 3dwl_C 79 AYVYEKRPDGTWKQTLVLLR---LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP---------LR 146 (377)
T ss_dssp EEEC------CCCCEEECCC---CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS---------CC
T ss_pred EEEEEcCCCCceeeeeEecc---cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc---------cC
Confidence 8899998766 222233321 13467789999999877776677888887765321 1212110 12
Q ss_pred cccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccc-----------eeEEEEecCCCCCCCCeEEEeCCCeEEEEe-C
Q 020019 201 VGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGE-----------EIKLIRVAGGPLSFGDGLELLSPTKLVVAG-N 268 (332)
Q Consensus 201 ~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~-----------~~~~v~~~g~~~~~pdGi~~~~dG~l~va~-~ 268 (332)
...+.++++|+|.++++-...+.|..+++........ .-+.+..- ........+++.++|+++++. .
T Consensus 147 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 147 STILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp SCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEET
T ss_pred CCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeC
Confidence 3467999999995445555567787777653211000 01111111 122446789999999866664 3
Q ss_pred C-ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-ECCeEEEE
Q 020019 269 P-SARLVESSDGWETAAVVAKFSGPVHRLATAATV-KDGRVYLN 310 (332)
Q Consensus 269 ~-~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~ 310 (332)
. ..++.....+.........+... ....+++++ .++++.++
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~ 268 (377)
T 3dwl_C 226 DSSVTIAYPSAPEQPPRALITVKLS-QLPLRSLLWANESAIVAA 268 (377)
T ss_dssp TTEEC-CEECSTTSCEEECCCEECS-SSCEEEEEEEETTEEEEE
T ss_pred CCcEEEEECCCCCCcceeeEeecCC-CCceEEEEEcCCCCEEEE
Confidence 2 23333444442211112222211 122466777 66666553
No 195
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.42 E-value=0.0003 Score=70.32 Aligned_cols=198 Identities=13% Similarity=0.126 Sum_probs=125.0
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++|+++++...++.|..+|..++.. . ..+..+. .....++++++ ++.+++... .+.
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~----~--~~~~~h~----~~v~~~~~s~~-~~~l~s~s~-----D~~ 495 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVS----T--RRFVGHT----KDVLSVAFSLD-NRQIVSASR-----DRT 495 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----E--EEEECCS----SCEEEEEECTT-SSCEEEEET-----TSC
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc----e--eEEeCCC----CCEEEEEEeCC-CCEEEEEeC-----CCE
Confidence 445789999999888888899999999876652 1 1232211 25688999997 554444332 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCC--cEEEEeCCCCeEEEEcCCC-ceEEEecCCCCCCcccccCccc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEG--NAYVTDVTGSKIWKVGVKG-EFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG--~lyvtd~~~~~I~~v~~~g-~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
|.+||....... ...... .........+++.+++ ..+++-+..+.|..+|... +....+.. ....
T Consensus 496 i~iwd~~~~~~~-~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~----------h~~~ 563 (694)
T 3dm0_A 496 IKLWNTLGECKY-TISEGG-EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG----------HTGY 563 (694)
T ss_dssp EEEECTTSCEEE-EECSST-TSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC----------CSSC
T ss_pred EEEEECCCCcce-eeccCC-CCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC----------CCCC
Confidence 888998653332 221110 1112456789999986 4778877888888888763 43332221 1123
Q ss_pred cCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC-CceEEEEcCCC
Q 020019 203 LNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN-PSARLVESSDG 279 (332)
Q Consensus 203 ~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~-~~~~~v~~~dg 279 (332)
.+.++++|||.++++-...+.|..+|+.+++ .+..+.. ......+++.+++.++++.. ..+++-....+
T Consensus 564 v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~----~~~~~~~----~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 564 VSTVAVSPDGSLCASGGKDGVVLLWDLAEGK----KLYSLEA----NSVIHALCFSPNRYWLCAATEHGIKIWDLESK 633 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSBCEEEETTTTE----EEECCBC----SSCEEEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCc----eEEEecC----CCcEEEEEEcCCCcEEEEEcCCCEEEEECCCC
Confidence 5789999999666666778889889988762 2322221 13456788999988777753 33444445555
No 196
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.42 E-value=0.00029 Score=65.11 Aligned_cols=203 Identities=9% Similarity=0.026 Sum_probs=124.4
Q ss_pred eEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEE
Q 020019 50 AKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAY 129 (332)
Q Consensus 50 ia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~ 129 (332)
.++.++++.+++...++.|..++..+++. ..... . -......++++++ ++++++... .+.+..|
T Consensus 103 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~--~-h~~~v~~~~~~~~-~~~l~s~s~-----d~~i~iw 166 (420)
T 3vl1_A 103 DTAKLQMRRFILGTTEGDIKVLDSNFNLQ-------REIDQ--A-HVSEITKLKFFPS-GEALISSSQ-----DMQLKIW 166 (420)
T ss_dssp EEECSSSCEEEEEETTSCEEEECTTSCEE-------EEETT--S-SSSCEEEEEECTT-SSEEEEEET-----TSEEEEE
T ss_pred EEEecCCCEEEEEECCCCEEEEeCCCcce-------eeecc--c-ccCccEEEEECCC-CCEEEEEeC-----CCeEEEE
Confidence 36788998888777789999999875541 12221 1 1125789999997 654444332 3578999
Q ss_pred ECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCC-Ccc------------
Q 020019 130 DLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFT-PKE------------ 195 (332)
Q Consensus 130 d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~-~p~------------ 195 (332)
|.++++......- .......+++.|+|+.+++-+..+.|..+|.. ++....+...... .+.
T Consensus 167 d~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 241 (420)
T 3vl1_A 167 SVKDGSNPRTLIG-----HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ 241 (420)
T ss_dssp ETTTCCCCEEEEC-----CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS
T ss_pred eCCCCcCceEEcC-----CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce
Confidence 9998876544331 12457789999999888888888888888865 4444333211000 000
Q ss_pred -cccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEe-C-Cce
Q 020019 196 -WYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAG-N-PSA 271 (332)
Q Consensus 196 -~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~-~-~~~ 271 (332)
..........++++++|.+.++-...+.|..+++.+++ ....+.. ........+++.++|. ++++. . +..
T Consensus 242 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~--~~~~~v~~~~~~~~~~~~l~~g~~dg~i 315 (420)
T 3vl1_A 242 LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE----QTIQLPS--KFTCSCNSLTVDGNNANYIYAGYENGML 315 (420)
T ss_dssp CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC----EEEEECC--TTSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc----eeEEccc--ccCCCceeEEEeCCCCCEEEEEeCCCeE
Confidence 00012345678889999555555667889999998762 3333321 1224567899999987 55554 3 333
Q ss_pred EEEEcCCC
Q 020019 272 RLVESSDG 279 (332)
Q Consensus 272 ~~v~~~dg 279 (332)
++.....+
T Consensus 316 ~vwd~~~~ 323 (420)
T 3vl1_A 316 AQWDLRSP 323 (420)
T ss_dssp EEEETTCT
T ss_pred EEEEcCCC
Confidence 43444444
No 197
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.40 E-value=0.00075 Score=67.37 Aligned_cols=211 Identities=11% Similarity=0.013 Sum_probs=132.2
Q ss_pred EecCCccccceEEcCCC-CEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCc
Q 020019 40 YHSSSFFRECAKWDDSG-RRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADV 118 (332)
Q Consensus 40 ~~~~~~~pegia~d~~g-~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~ 118 (332)
+.+......++++++++ +++++...++.|..++............ ..+..+. .....++++++ +++.++...
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~-~~~~~h~----~~v~~v~~s~~-g~~l~sgs~- 450 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQ-RRLTGHS----HFVEDVVLSSD-GQFALSGSW- 450 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEE-EEEECCS----SCEEEEEECTT-SSEEEEEET-
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccccccc-ceecCCC----CcEEEEEECCC-CCEEEEEeC-
Confidence 34444455678888775 5666777789998888764331000001 1121111 25678999997 665555432
Q ss_pred CCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCccccc
Q 020019 119 FGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 119 ~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~ 198 (332)
.+.|.+||.++++......- . ......+++.++|+.+++-+..+.|...+..+........... .
T Consensus 451 ----Dg~v~vwd~~~~~~~~~~~~--h---~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~------~ 515 (694)
T 3dm0_A 451 ----DGELRLWDLAAGVSTRRFVG--H---TKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGE------G 515 (694)
T ss_dssp ----TSEEEEEETTTTEEEEEEEC--C---SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTT------S
T ss_pred ----CCcEEEEECCCCcceeEEeC--C---CCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCC------C
Confidence 45789999998876544321 1 2456789999999888888888999888877653332211110 0
Q ss_pred CccccCeEEEccCc--eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEE
Q 020019 199 NLVGLNGIVYHPDG--FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLV 274 (332)
Q Consensus 199 ~~~~~nGi~~~~dG--~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v 274 (332)
.......+++++++ .++++-...+.|..+|+.+.+ ....+. .+......+++.++|+++++.. ..+++-
T Consensus 516 h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~----~~~~~~---~h~~~v~~v~~spdg~~l~sg~~Dg~i~iw 588 (694)
T 3dm0_A 516 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK----LRSTLA---GHTGYVSTVAVSPDGSLCASGGKDGVVLLW 588 (694)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC----EEEEEC---CCSSCEEEEEECTTSSEEEEEETTSBCEEE
T ss_pred CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc----EEEEEc---CCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 12235789999987 466666778889889988662 333332 1334567899999999888753 334554
Q ss_pred EcCCC
Q 020019 275 ESSDG 279 (332)
Q Consensus 275 ~~~dg 279 (332)
....+
T Consensus 589 d~~~~ 593 (694)
T 3dm0_A 589 DLAEG 593 (694)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 55666
No 198
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.39 E-value=0.00012 Score=67.17 Aligned_cols=224 Identities=13% Similarity=0.053 Sum_probs=127.1
Q ss_pred EEEecCCccccceEEcCC----C---CEEEEEecCCeEEEEECCCCCCCccc-eeeeEEecccCc-CCCccceEEEe---
Q 020019 38 YHYHSSSFFRECAKWDDS----G---RRFIVSFLDGGIGQVAVPDDYPPGTV-LEEVTLVKDLEL-TGNGSLGLVLD--- 105 (332)
Q Consensus 38 i~~~~~~~~pegia~d~~----g---~~~~~~~~~g~I~~vd~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~gi~vd--- 105 (332)
..+.........+++.++ | +++++...++.|..++..+++..... .. .+...+.. ....+..+.+.
T Consensus 56 ~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 56 YSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFE--KLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp EEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEE--EECCSCTTGGGSCEEEEEEECCC
T ss_pred eEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccce--eecccccccCCCcEEEEEEeecc
Confidence 333433335567899998 8 87777777898888887655421000 11 22111100 01357889999
Q ss_pred -CCCCeE-EEEEeCcCCCccceEEEEECCC------CcEEE-----EEec--CCCCCCCCCccceEECCCCcEEEEeCCC
Q 020019 106 -HPRNRL-LVVAADVFGNKYSAVAAYDLST------WNRLF-----LTQL--SGPSDGKSCADDVTVDAEGNAYVTDVTG 170 (332)
Q Consensus 106 -~~~g~l-~v~~~~~~~~~~~~l~~~d~~~------g~~~~-----~~~l--~~~~~~~~~~ndiavd~dG~lyvtd~~~ 170 (332)
++ +.. +++... .+.+..||.++ ++... .+.. ..+.........+++.++| ++++-...
T Consensus 134 ~~~-~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d 206 (397)
T 1sq9_A 134 DRL-LSHRLVATDV-----KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN 206 (397)
T ss_dssp -----CEEEEEEET-----TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT
T ss_pred CCC-CceEEEEEeC-----CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC
Confidence 86 554 444322 35688899876 43322 1210 0001113567889999999 88888888
Q ss_pred CeEEEEcCC-CceEEEecCC-CCCCcccccCccccCeEEEccCceEEEEeCCC---CeEEEEeCCCCCCccceeEEEEec
Q 020019 171 SKIWKVGVK-GEFLSIISSP-LFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFS---GNLFKIDIVDGVGEGEEIKLIRVA 245 (332)
Q Consensus 171 ~~I~~v~~~-g~~~~~~~~~-~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~---~~i~~id~~~~~~~~~~~~~v~~~ 245 (332)
+.|..++.. ++....+... .-. ........+++++++.++++-... +.|..+++.+++ .+..+..+
T Consensus 207 g~i~i~d~~~~~~~~~~~~~~~h~-----~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~----~~~~~~~~ 277 (397)
T 1sq9_A 207 GTVQISELSTLRPLYNFESQHSMI-----NNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE----RIGSLSVP 277 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCC--------CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC----EEEEECBC
T ss_pred CcEEEEECCCCceeEEEecccccc-----ccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc----ccceeccC
Confidence 999999976 4444333220 000 002346799999999444444445 789999988762 34444321
Q ss_pred C----------CCCCCCCeEEEeCCCeEEEEeC--CceEEEEcCCC
Q 020019 246 G----------GPLSFGDGLELLSPTKLVVAGN--PSARLVESSDG 279 (332)
Q Consensus 246 g----------~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~~dg 279 (332)
. ........+++.++|+++++.. ...++....++
T Consensus 278 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 278 THSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp --------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred cccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 0 0123456899999988777753 33444455566
No 199
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.39 E-value=2.3e-05 Score=72.37 Aligned_cols=211 Identities=8% Similarity=0.085 Sum_probs=124.8
Q ss_pred ccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceE
Q 020019 47 RECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAV 126 (332)
Q Consensus 47 pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l 126 (332)
...++|+++++++++...++.|..++..+.... .+...... + -......+++.+++++++++... .+.|
T Consensus 70 v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~---~~~~~~~~--~-h~~~v~~~~~~~~~~~~l~s~~~-----dg~v 138 (416)
T 2pm9_A 70 FNDLDWSHNNKIIAGALDNGSLELYSTNEANNA---INSMARFS--N-HSSSVKTVKFNAKQDNVLASGGN-----NGEI 138 (416)
T ss_dssp EEEEEECSSSSCEEEEESSSCEEEECCSSTTSC---CCEEEECC--C-SSSCCCEEEECSSSTTBEEEECS-----SSCE
T ss_pred eEEEEECCCCCeEEEEccCCeEEEeeccccccc---ccchhhcc--C-CccceEEEEEcCCCCCEEEEEcC-----CCeE
Confidence 457899999998887777899999987752100 00001111 1 11256889999863444444332 3568
Q ss_pred EEEECCCCc------EEEEEecCCCCCCCCCccceEECCC-CcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCccccc
Q 020019 127 AAYDLSTWN------RLFLTQLSGPSDGKSCADDVTVDAE-GNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 127 ~~~d~~~g~------~~~~~~l~~~~~~~~~~ndiavd~d-G~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~ 198 (332)
..||.++++ ....... ..........+++.++ ++++++-...+.|..++.. ++....+...... ..
T Consensus 139 ~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~----~~ 212 (416)
T 2pm9_A 139 FIWDMNKCTESPSNYTPLTPGQ--SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN----SG 212 (416)
T ss_dssp EBCBTTTTSSCTTTCCCBCCCC--SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCS----SC
T ss_pred EEEECCCCcccccccccccccc--ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccc----cc
Confidence 899998775 2211110 0111346788999999 6788888888999999976 3433333211000 00
Q ss_pred CccccCeEEEccCc-eEEEEeCCCC---eEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC-CCeEEEEeC--Cce
Q 020019 199 NLVGLNGIVYHPDG-FLIVIHTFSG---NLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS-PTKLVVAGN--PSA 271 (332)
Q Consensus 199 ~~~~~nGi~~~~dG-~Lyva~~~~~---~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~~--~~~ 271 (332)
.......++++|+| .++++-...+ .|..+++.++.. ....+.. + .......+++.+ +++++++.. ...
T Consensus 213 ~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~---~~~~~~~-~-~~~~v~~~~~s~~~~~~l~s~~~dg~v 287 (416)
T 2pm9_A 213 IKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT---PLQTLNQ-G-HQKGILSLDWCHQDEHLLLSSGRDNTV 287 (416)
T ss_dssp CCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS---CSBCCCS-C-CSSCEEEEEECSSCSSCEEEEESSSEE
T ss_pred cCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC---CcEEeec-C-ccCceeEEEeCCCCCCeEEEEeCCCCE
Confidence 02346899999998 6666666666 888888886521 2222220 1 224566888988 787777653 333
Q ss_pred EEEEcCCC
Q 020019 272 RLVESSDG 279 (332)
Q Consensus 272 ~~v~~~dg 279 (332)
++.....+
T Consensus 288 ~~wd~~~~ 295 (416)
T 2pm9_A 288 LLWNPESA 295 (416)
T ss_dssp EEECSSSC
T ss_pred EEeeCCCC
Confidence 43344455
No 200
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.39 E-value=0.00061 Score=63.07 Aligned_cols=196 Identities=13% Similarity=0.093 Sum_probs=122.2
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....+.++ ++.+++...++.|..++...... ... .+.... ....++.++++ +.++++... .+.
T Consensus 178 ~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~---~~~--~~~~~~----~~v~~~~~~~~-~~~l~s~~~-----d~~ 240 (401)
T 4aez_A 178 RVGCLSWN--RHVLSSGSRSGAIHHHDVRIANH---QIG--TLQGHS----SEVCGLAWRSD-GLQLASGGN-----DNV 240 (401)
T ss_dssp CEEEEEEE--TTEEEEEETTSEEEEEETTSSSC---EEE--EEECCS----SCEEEEEECTT-SSEEEEEET-----TSC
T ss_pred ceEEEEEC--CCEEEEEcCCCCEEEEecccCcc---eee--EEcCCC----CCeeEEEEcCC-CCEEEEEeC-----CCe
Confidence 33456663 56666667789999999864332 111 222111 25788999996 654544432 357
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCC-cEEEEeC--CCCeEEEEcCC-CceEEEecCCCCCCcccccCcc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEG-NAYVTDV--TGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG-~lyvtd~--~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~ 201 (332)
+..||.++++......- .......+++.|+| +++++.. ..+.|..++.. ++....+.. ..
T Consensus 241 v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-----------~~ 304 (401)
T 4aez_A 241 VQIWDARSSIPKFTKTN-----HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-----------GS 304 (401)
T ss_dssp EEEEETTCSSEEEEECC-----CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-----------SS
T ss_pred EEEccCCCCCccEEecC-----CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-----------CC
Confidence 89999998877654321 13457789999986 5777754 68889999875 444433321 12
Q ss_pred ccCeEEEccCc-eEEEEe-CCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEEEcC
Q 020019 202 GLNGIVYHPDG-FLIVIH-TFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLVESS 277 (332)
Q Consensus 202 ~~nGi~~~~dG-~Lyva~-~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v~~~ 277 (332)
....++++++| .|+++. ...+.|..++..++. ........+ .......+++.++|+++++.. +..++....
T Consensus 305 ~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~----~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 305 QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG----LTKQVDIPA-HDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp CEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE----EEEEEEEEC-CSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred cEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc----ceeEEEecC-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 36789999999 666553 367888888887652 233333332 335677899999998777753 233333444
Q ss_pred CC
Q 020019 278 DG 279 (332)
Q Consensus 278 dg 279 (332)
++
T Consensus 380 ~~ 381 (401)
T 4aez_A 380 DG 381 (401)
T ss_dssp C-
T ss_pred CC
Confidence 44
No 201
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.39 E-value=1.9e-05 Score=77.25 Aligned_cols=174 Identities=16% Similarity=0.104 Sum_probs=100.6
Q ss_pred cccceEEcCCCCEEEEEec---C--CeEEEEEC--CCCCCCccceeeeEEecccCcCCCccceEEEeCCC-CeEEEEEeC
Q 020019 46 FRECAKWDDSGRRFIVSFL---D--GGIGQVAV--PDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPR-NRLLVVAAD 117 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~---~--g~I~~vd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~-g~l~v~~~~ 117 (332)
....++|+|+ +++++... . .+|+.++. +++. . .+... . +.....+.++. +.+|++...
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~------~--~l~~~---~--~~~~~~~s~dg~~~~~~s~~~ 131 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEE------Q--RLEAV---K--PMRILSGVDTGEAVVFTGATE 131 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCC------E--ECTTS---C--SBEEEEEEECSSCEEEEEECS
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcc------c--cccCC---C--CceeeeeCCCCCeEEEEecCC
Confidence 3456788988 66665532 2 26888887 4332 1 22211 1 22234555542 344554432
Q ss_pred cCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEE-Ee-C-C-CCeEEEEcCC-CceEEEecCCCCC
Q 020019 118 VFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYV-TD-V-T-GSKIWKVGVK-GEFLSIISSPLFT 192 (332)
Q Consensus 118 ~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyv-td-~-~-~~~I~~v~~~-g~~~~~~~~~~~~ 192 (332)
..+..||+++++.......+ . .+++++|||+.++ +. . . ...|+.+|.+ |+...+...
T Consensus 132 ------~~~~l~d~~~g~~~~l~~~~------~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~---- 193 (582)
T 3o4h_A 132 ------DRVALYALDGGGLRELARLP------G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG---- 193 (582)
T ss_dssp ------SCEEEEEEETTEEEEEEEES------S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS----
T ss_pred ------CCceEEEccCCcEEEeecCC------C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC----
Confidence 23457899888766544331 1 7899999997444 32 1 1 2679999976 554443221
Q ss_pred CcccccCccccCeEEEccCc-eEEEEeCCCC--eEEEEeCCCCCCccceeEEEEecCCCCCCCCeEE--------EeCCC
Q 020019 193 PKEWYKNLVGLNGIVYHPDG-FLIVIHTFSG--NLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLE--------LLSPT 261 (332)
Q Consensus 193 ~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~--~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~--------~~~dG 261 (332)
....+.++|+||| .|+.++. .+ +|++++++++ ... + +.+ ....+.+++ +++||
T Consensus 194 -------~~~~~~~~~SpDG~~l~~~~~-~~~~~i~~~d~~~~-----~~~-~-~~~-~~~~~~~~~~~~~~~~~~spdg 257 (582)
T 3o4h_A 194 -------EGSFSSASISPGMKVTAGLET-AREARLVTVDPRDG-----SVE-D-LEL-PSKDFSSYRPTAITWLGYLPDG 257 (582)
T ss_dssp -------SCEEEEEEECTTSCEEEEEEC-SSCEEEEEECTTTC-----CEE-E-CCC-SCSHHHHHCCSEEEEEEECTTS
T ss_pred -------CCccccceECCCCCEEEEccC-CCeeEEEEEcCCCC-----cEE-E-ccC-CCcChhhhhhccccceeEcCCC
Confidence 1224789999999 7775544 44 8999999877 233 2 221 112233344 99999
Q ss_pred eEEEEe
Q 020019 262 KLVVAG 267 (332)
Q Consensus 262 ~l~va~ 267 (332)
.+|++.
T Consensus 258 ~~~~~~ 263 (582)
T 3o4h_A 258 RLAVVA 263 (582)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 888875
No 202
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.38 E-value=0.001 Score=58.39 Aligned_cols=219 Identities=14% Similarity=0.135 Sum_probs=129.9
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++++.+++...++.|..++........ ... .+... ......+.+++ +.++.+.. .+.
T Consensus 61 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~-~~~--~~~~~----~~~i~~~~~~~--~~l~~~~~------d~~ 125 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGED-PLY--TLIGH----QGNVCSLSFQD--GVVISGSW------DKT 125 (313)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC-C-C--EECCC----SSCEEEEEEET--TEEEEEET------TSE
T ss_pred cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC-ccc--chhhc----ccCEEEEEecC--CEEEEEeC------CCC
Confidence 55678999999988888778999888866543100 011 12111 12456778753 45555543 356
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccC
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
+..|| .++....... .......+++.+ +++.+++-...+.|..++.. +........ ......
T Consensus 126 i~~~d--~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~---------~~~~i~ 188 (313)
T 3odt_A 126 AKVWK--EGSLVYNLQA-----HNASVWDAKVVSFSENKFLTASADKTIKLWQND-KVIKTFSGI---------HNDVVR 188 (313)
T ss_dssp EEEEE--TTEEEEEEEC-----CSSCEEEEEEEETTTTEEEEEETTSCEEEEETT-EEEEEECSS---------CSSCEE
T ss_pred EEEEc--CCcEEEeccc-----CCCceeEEEEccCCCCEEEEEECCCCEEEEecC-ceEEEEecc---------CcccEE
Confidence 88899 3444443332 124456677777 77888877788888888844 333222211 113457
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc-eEEEEcCCCceEE
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS-ARLVESSDGWETA 283 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~-~~~v~~~dg~~~~ 283 (332)
.+++++++. +++-...+.|..+++.+++ .+..+.. .......+++.++|.|+.+...+ .++....++ +
T Consensus 189 ~~~~~~~~~-~~~~~~dg~i~i~d~~~~~----~~~~~~~---~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~-- 257 (313)
T 3odt_A 189 HLAVVDDGH-FISCSNDGLIKLVDMHTGD----VLRTYEG---HESFVYCIKLLPNGDIVSCGEDRTVRIWSKENG-S-- 257 (313)
T ss_dssp EEEEEETTE-EEEEETTSEEEEEETTTCC----EEEEEEC---CSSCEEEEEECTTSCEEEEETTSEEEEECTTTC-C--
T ss_pred EEEEcCCCe-EEEccCCCeEEEEECCchh----hhhhhhc---CCceEEEEEEecCCCEEEEecCCEEEEEECCCC-c--
Confidence 899999998 4455567889999998762 4444442 22456789999999877766543 343344555 2
Q ss_pred EEEeeecCCCcccceEEEE-ECCeEEE
Q 020019 284 AVVAKFSGPVHRLATAATV-KDGRVYL 309 (332)
Q Consensus 284 ~~~~~~~~~~~~~pt~va~-~~g~lyv 309 (332)
....+... ....+++++ .++++.+
T Consensus 258 -~~~~~~~~-~~~i~~~~~~~~~~~~~ 282 (313)
T 3odt_A 258 -LKQVITLP-AISIWSVDCMSNGDIIV 282 (313)
T ss_dssp -EEEEEECS-SSCEEEEEECTTSCEEE
T ss_pred -eeEEEecc-CceEEEEEEccCCCEEE
Confidence 22222221 123356666 4555443
No 203
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.36 E-value=7.7e-05 Score=68.38 Aligned_cols=182 Identities=14% Similarity=0.165 Sum_probs=105.2
Q ss_pred cceEEcCCCCEEEEE-ecCC--eEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 48 ECAKWDDSGRRFIVS-FLDG--GIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 48 egia~d~~g~~~~~~-~~~g--~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
..++++|||+.++.. ..++ .|+.++..+++. . .+...+. ....+.++.|+..+|+++.. ..
T Consensus 39 ~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~-----~--~lt~~~~---~~~~~~~~spdg~~l~~~~~------~~ 102 (388)
T 3pe7_A 39 YQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA-----T--QLTEGRG---DNTFGGFLSPDDDALFYVKD------GR 102 (388)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEE-----E--ECCCSSC---BCSSSCEECTTSSEEEEEET------TT
T ss_pred cCccCCCCCCEEEEEEcCCCCceEEEEeCCCCce-----E--EeeeCCC---CCccceEEcCCCCEEEEEeC------CC
Confidence 348899999855444 3345 599999887652 1 2221111 12336789997445666653 24
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEE----------------------eCCCCeEEEEcCC-Cc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVT----------------------DVTGSKIWKVGVK-GE 181 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvt----------------------d~~~~~I~~v~~~-g~ 181 (332)
.|+++|+++++.......+ . ........+++++|..++. ......|++++.+ |+
T Consensus 103 ~l~~~d~~~g~~~~~~~~~--~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 103 NLMRVDLATLEENVVYQVP--A-EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp EEEEEETTTCCEEEEEECC--T-TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred eEEEEECCCCcceeeeech--h-hcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 6899999998876655552 1 1111122345888876653 1134679999976 44
Q ss_pred eEEEecCCCCCCcccccCccccCeEEEcc-Cc-eEEEEeCC-----CCeEEEEeCCCCCCccceeEEEEecCCCCCCCCe
Q 020019 182 FLSIISSPLFTPKEWYKNLVGLNGIVYHP-DG-FLIVIHTF-----SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDG 254 (332)
Q Consensus 182 ~~~~~~~~~~~~p~~~~~~~~~nGi~~~~-dG-~Lyva~~~-----~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdG 254 (332)
...+.... .....++++| || .|+++... ..+|+.++++++ ..+.+... ........
T Consensus 180 ~~~l~~~~-----------~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-----~~~~l~~~-~~~~~~~~ 242 (388)
T 3pe7_A 180 STVILQEN-----------QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT-----NMRKVKTH-AEGESCTH 242 (388)
T ss_dssp EEEEEEES-----------SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC-----CCEESCCC-CTTEEEEE
T ss_pred eEEeecCC-----------ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC-----ceEEeeeC-CCCccccc
Confidence 44433221 1246789999 99 66554443 448999998865 23222211 10011235
Q ss_pred EEEeCCCe-EEE
Q 020019 255 LELLSPTK-LVV 265 (332)
Q Consensus 255 i~~~~dG~-l~v 265 (332)
.++.|||+ |++
T Consensus 243 ~~~spdg~~l~~ 254 (388)
T 3pe7_A 243 EFWVPDGSALVY 254 (388)
T ss_dssp EEECTTSSCEEE
T ss_pred ceECCCCCEEEE
Confidence 67889987 533
No 204
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.36 E-value=0.00021 Score=67.41 Aligned_cols=160 Identities=9% Similarity=0.021 Sum_probs=96.8
Q ss_pred ccceEEEeCCCCeE-EEEEeCcCCCccceEEEEECC--CCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEE
Q 020019 98 GSLGLVLDHPRNRL-LVVAADVFGNKYSAVAAYDLS--TWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIW 174 (332)
Q Consensus 98 ~~~gi~vd~~~g~l-~v~~~~~~~~~~~~l~~~d~~--~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~ 174 (332)
.+.+++++++ ++. +++.. ..+.+.+||.+ +++....+... .....+..+++.|+|+.+++-...+.|+
T Consensus 104 ~v~~~~~s~d-~~~l~~~~~-----~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~~g~v~ 174 (450)
T 2vdu_B 104 YIRNLRLTSD-ESRLIACAD-----SDKSLLVFDVDKTSKNVLKLRKRF---CFSKRPNAISIAEDDTTVIIADKFGDVY 174 (450)
T ss_dssp CEEEEEECTT-SSEEEEEEG-----GGTEEEEEEECSSSSSCEEEEEEE---ECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ceEEEEEcCC-CCEEEEEEC-----CCCeEEEEECcCCCCceeeeeecc---cCCCCceEEEEcCCCCEEEEEeCCCcEE
Confidence 3678999997 654 45543 24578899988 77665544321 0124577899999998666656688898
Q ss_pred EEcCC-CceEEEecCCCCCCcccccCccccCeEEEccC---ceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCC
Q 020019 175 KVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPD---GFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLS 250 (332)
Q Consensus 175 ~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~d---G~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~ 250 (332)
.++.. ++..... ...+. ......+.++|+|+ +.++++-...+.|..+++.+++ .+..+. . ....
T Consensus 175 ~~~~~~~~~~~~~-~~~~~-----~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~----~~~~~~-~-~h~~ 242 (450)
T 2vdu_B 175 SIDINSIPEEKFT-QEPIL-----GHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF----IVDKWL-F-GHKH 242 (450)
T ss_dssp EEETTSCCCSSCC-CCCSE-----ECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT----CEEEEC-C-CCSS
T ss_pred EEecCCccccccc-ceeee-----cccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc----eeeeee-c-CCCC
Confidence 88864 2211000 00110 01234678999999 8555555567788888888662 333322 2 1234
Q ss_pred CCCeEEEeCCCeEEEEeC--CceEEEEcCCC
Q 020019 251 FGDGLELLSPTKLVVAGN--PSARLVESSDG 279 (332)
Q Consensus 251 ~pdGi~~~~dG~l~va~~--~~~~~v~~~dg 279 (332)
....+++. +|+++++.. ...++.....+
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTG 272 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTC
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCC
Confidence 56789999 888777753 23344455566
No 205
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.36 E-value=8.1e-05 Score=67.21 Aligned_cols=182 Identities=10% Similarity=0.100 Sum_probs=107.8
Q ss_pred cceEEcCCCCEEEEE-ecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCC------
Q 020019 48 ECAKWDDSGRRFIVS-FLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG------ 120 (332)
Q Consensus 48 egia~d~~g~~~~~~-~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~------ 120 (332)
.|...-.++.+||.+ ...++|++++.++... +.+.+ + .+.-|.++. +.||.+.....+
T Consensus 18 ~g~~~~~g~~iy~~n~~d~~~ly~~~~dg~~~--------~~l~~-~----~~~~i~~~g--~~Iyy~~~~~~~~~~~~~ 82 (302)
T 3s25_A 18 AGLFCESDGEVFFSNTNDNGRLYAMNIDGSNI--------HKLSN-D----TAMYINADK--NYVYYVRNNNQKITSQTF 82 (302)
T ss_dssp TTCEEEETTEEEEEEGGGTTEEEEEETTSCSC--------EEEEE-E----EEEEEEECS--SEEEEEEECC------CC
T ss_pred ceEEEEeCCEEEEEeCCCCceEEEEcCCCCCC--------EEccC-C----ceeeEEEcC--CEEEEEECCCCcccccce
Confidence 445554555677776 4578999999875542 22321 1 344565553 788888753210
Q ss_pred --CccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCC-cEEEEe---CCCCeEEEEcCCCceEEEecCCCCCCc
Q 020019 121 --NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEG-NAYVTD---VTGSKIWKVGVKGEFLSIISSPLFTPK 194 (332)
Q Consensus 121 --~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG-~lyvtd---~~~~~I~~v~~~g~~~~~~~~~~~~~p 194 (332)
.....|++++++.++....... .. .++.++| .||+++ .....|++++.+|+..+.+....
T Consensus 83 ~~~n~~~Iy~i~~dg~~~~~l~~~--------~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~---- 148 (302)
T 3s25_A 83 FSYDRNSLCRIKRNGHGSTVLDPD--------PC--IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY---- 148 (302)
T ss_dssp SSCCSEEEEEEETTSCCCEEEECS--------CE--EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC----
T ss_pred eccCCCeEEEEeCCCCcceEeecC--------Cc--cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC----
Confidence 0124688889887664433221 11 2444454 699998 67789999999986443332211
Q ss_pred ccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC-CCeEEEEeCCc--
Q 020019 195 EWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS-PTKLVVAGNPS-- 270 (332)
Q Consensus 195 ~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~~~~-- 270 (332)
.++++++| .||+++....+|++++++++ ..+.+ ..+ . ..+.+.| ++.||.++...
T Consensus 149 ----------~~~~~~~g~~iy~t~~g~~~Iy~~~l~g~-----~~~~l-~~~-~----~~~~~~P~g~~iy~t~~~~~~ 207 (302)
T 3s25_A 149 ----------LFTCNTSDRYFYYNNPKNGQLYRYDTASQ-----SEALF-YDC-N----CYKPVVLDDTNVYYMDVNRDN 207 (302)
T ss_dssp ----------CCCSEEETTEEEEECTTTCCEEEEETTTT-----EEEEE-ECS-C----EEEEEEEETTEEEEEEGGGTT
T ss_pred ----------ceEeeEECCEEEEEeCCCceEEEEECCCC-----CEEEE-eCC-C----ccceeeecCCEEEEEEcCCCc
Confidence 12456777 99999988889999999865 33434 221 1 1234554 47788886331
Q ss_pred eEEEEcCCC
Q 020019 271 ARLVESSDG 279 (332)
Q Consensus 271 ~~~v~~~dg 279 (332)
...+...||
T Consensus 208 ~I~~~~ldG 216 (302)
T 3s25_A 208 AIVHVNINN 216 (302)
T ss_dssp EEEEECSSS
T ss_pred EEEEEECCC
Confidence 222344555
No 206
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.35 E-value=7.6e-05 Score=68.84 Aligned_cols=201 Identities=9% Similarity=0.092 Sum_probs=123.8
Q ss_pred cccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
....++++++ ++++++...++.|..++..+++................ .......+++.++.+.++++... .+
T Consensus 115 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~-----dg 188 (416)
T 2pm9_A 115 SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS-SVDEVISLAWNQSLAHVFASAGS-----SN 188 (416)
T ss_dssp CCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC-SSCCCCEEEECSSCTTEEEEESS-----SS
T ss_pred ceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccC-CCCCeeEEEeCCCCCcEEEEEcC-----CC
Confidence 4567899998 77777777789999999876541000000001100000 11256889999963555555432 45
Q ss_pred eEEEEECCCCcEEEEEecCCCCCC-CCCccceEECCCC-cEEEEeCCCC---eEEEEcCCC--ceEEEecCCCCCCcccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDG-KSCADDVTVDAEG-NAYVTDVTGS---KIWKVGVKG--EFLSIISSPLFTPKEWY 197 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~-~~~~ndiavd~dG-~lyvtd~~~~---~I~~v~~~g--~~~~~~~~~~~~~p~~~ 197 (332)
.|..||.++++.........+..+ ....+.+++.|+| +++++....+ .|..++... +....+..
T Consensus 189 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~--------- 259 (416)
T 2pm9_A 189 FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQ--------- 259 (416)
T ss_dssp CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCS---------
T ss_pred CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeec---------
Confidence 689999998877655544211101 3567889999997 5777766665 777777653 22111110
Q ss_pred cCccccCeEEEcc-CceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCC-eEEEEeC
Q 020019 198 KNLVGLNGIVYHP-DGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPT-KLVVAGN 268 (332)
Q Consensus 198 ~~~~~~nGi~~~~-dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG-~l~va~~ 268 (332)
........++++| ++.++++-...++|..+++.+++ .+..+.. .......+++.++| +++++..
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~----~~~~~~~---~~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE----QLSQFPA---RGNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC----EEEEEEC---SSSCCCCEEECTTCTTEEEECC
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc----cceeecC---CCCceEEEEECCCCCCEEEEEe
Confidence 0123467999999 78555566668889999988762 4544442 22456789999988 6777753
No 207
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.34 E-value=7.5e-05 Score=74.92 Aligned_cols=189 Identities=6% Similarity=0.069 Sum_probs=110.8
Q ss_pred ccceEEcCCCCEEEEE-ecCC--------------------------------eEEEEECCC-CCCCccceeeeEEeccc
Q 020019 47 RECAKWDDSGRRFIVS-FLDG--------------------------------GIGQVAVPD-DYPPGTVLEEVTLVKDL 92 (332)
Q Consensus 47 pegia~d~~g~~~~~~-~~~g--------------------------------~I~~vd~~~-~~~~~~~~~~~~~~~~~ 92 (332)
+.+++|+|||+.++.. ...+ +|+.++..+ ++. . .+. .+
T Consensus 211 ~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~-----~--~~~-~~ 282 (741)
T 2ecf_A 211 HTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT-----Q--WID-LG 282 (741)
T ss_dssp CCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC-----E--EEC-CC
T ss_pred ccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce-----E--Eec-CC
Confidence 4679999999865544 3221 788888876 652 1 221 11
Q ss_pred CcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCC--
Q 020019 93 ELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTG-- 170 (332)
Q Consensus 93 ~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~-- 170 (332)
.........+++ ++...|+++..+.. .....|+.||.++++........... -....+.+++.|||+++++....
T Consensus 283 ~~~~~~~~~~~~-pDg~~l~~~~~~~~-~~~~~i~~~d~~~g~~~~~~~~~~~~-~~~~~~~~~~spdg~~~~~~~~~g~ 359 (741)
T 2ecf_A 283 KEQDIYLARVNW-RDPQHLSFQRQSRD-QKKLDLVEVTLASNQQRVLAHETSPT-WVPLHNSLRFLDDGSILWSSERTGF 359 (741)
T ss_dssp SCSSEEEEEEEE-EETTEEEEEEEETT-SSEEEEEEEETTTCCEEEEEEEECSS-CCCCCSCCEECTTSCEEEEECTTSS
T ss_pred CCcceEEEEEEe-CCCCEEEEEEeccc-CCeEEEEEEECCCCceEEEEEcCCCC-cCCcCCceEECCCCeEEEEecCCCc
Confidence 001124567888 87344555543211 13457999999998876554431100 00134679999999876665444
Q ss_pred CeEEEEcCCCceEEEecCCCCCCcccccCccccCeE-EEccCc-eEEEEeCCC----CeEEEEeCCCCCCccceeEEEEe
Q 020019 171 SKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGI-VYHPDG-FLIVIHTFS----GNLFKIDIVDGVGEGEEIKLIRV 244 (332)
Q Consensus 171 ~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi-~~~~dG-~Lyva~~~~----~~i~~id~~~~~~~~~~~~~v~~ 244 (332)
..||.++.+|+ ...+.... .....+ +|++|| .||++.... .+||+++.++. ..+.+..
T Consensus 360 ~~l~~~~~~~~-~~~l~~~~----------~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~-----~~~~l~~ 423 (741)
T 2ecf_A 360 QHLYRIDSKGK-AAALTHGN----------WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG-----QPQRLSK 423 (741)
T ss_dssp CEEEEECSSSC-EEESCCSS----------SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC-----CCEECCC
T ss_pred cEEEEEcCCCC-eeeeeecc----------eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC-----Ceeeccc
Confidence 47999998877 43332111 122355 599999 787766543 36888887643 2332321
Q ss_pred cCCCCCCCCeEEEeCCCeEEEE
Q 020019 245 AGGPLSFGDGLELLSPTKLVVA 266 (332)
Q Consensus 245 ~g~~~~~pdGi~~~~dG~l~va 266 (332)
......+++++||+.++.
T Consensus 424 ----~~~~~~~~~spdg~~l~~ 441 (741)
T 2ecf_A 424 ----APGMHSASFARNASVYVD 441 (741)
T ss_dssp ----SCSEEEEEECTTSSEEEE
T ss_pred ----CCCceEEEECCCCCEEEE
Confidence 122346788999886555
No 208
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.34 E-value=0.00044 Score=63.24 Aligned_cols=157 Identities=10% Similarity=0.111 Sum_probs=102.8
Q ss_pred cccceEEcC-CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDD-SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~-~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
...++++.+ +++.+++...++.|..++..+.. .. .+..... .......+++.++ ++.+++.. ..+
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-----~~--~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~-----~d~ 185 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV-----IQ--VFAKTDS-WDYWYCCVDVSVS-RQMLATGD-----STG 185 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTSCE-----EE--EEECCCC-SSCCEEEEEEETT-TTEEEEEE-----TTS
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc-----eE--EEeccCC-CCCCeEEEEECCC-CCEEEEEC-----CCC
Confidence 445789999 56777777778999999987532 11 2321111 1125788999997 55444433 246
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC-----CceEEEecCCCCCCccccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK-----GEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~-----g~~~~~~~~~~~~~p~~~~ 198 (332)
.+..||.+ ++......- .......+++.|++. ++++.+..+.|..+|.. ++.......
T Consensus 186 ~i~i~d~~-~~~~~~~~~-----h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~---------- 249 (383)
T 3ei3_B 186 RLLLLGLD-GHEIFKEKL-----HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPH---------- 249 (383)
T ss_dssp EEEEEETT-SCEEEEEEC-----SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC----------
T ss_pred CEEEEECC-CCEEEEecc-----CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecC----------
Confidence 78999995 554433332 135677899999997 88888888888888865 233332221
Q ss_pred CccccCeEEEcc-CceEEEEeCCCCeEEEEeCCCCC
Q 020019 199 NLVGLNGIVYHP-DGFLIVIHTFSGNLFKIDIVDGV 233 (332)
Q Consensus 199 ~~~~~nGi~~~~-dG~Lyva~~~~~~i~~id~~~~~ 233 (332)
......++|+| +|.++++-...++|..+++.+++
T Consensus 250 -~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 250 -EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp -SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred -CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 12457899999 99555555667889999988663
No 209
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.31 E-value=0.00015 Score=68.07 Aligned_cols=206 Identities=9% Similarity=0.016 Sum_probs=128.0
Q ss_pred EEEecCCccccceEEcCCCC-EEEEEecCCeEEEEECCCCCCCcccee-eeEEecccCcCCCccceEEEeCCCCeEEEEE
Q 020019 38 YHYHSSSFFRECAKWDDSGR-RFIVSFLDGGIGQVAVPDDYPPGTVLE-EVTLVKDLELTGNGSLGLVLDHPRNRLLVVA 115 (332)
Q Consensus 38 i~~~~~~~~pegia~d~~g~-~~~~~~~~g~I~~vd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~ 115 (332)
..+........+++|++++. ++++...+|.|..++...+........ ...+.. -...+..++++++++.++++.
T Consensus 175 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 175 LRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG----HTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp EEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECC----CSSCEEEEEECSSCTTEEEEE
T ss_pred EEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecC----CCCCEeeeEEeCCCCCEEEEE
Confidence 34444444567899999988 777777789999999875321000000 001111 112578899998546666665
Q ss_pred eCcCCCccceEEEEECCCC---cEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCCC--ceEEEecCC
Q 020019 116 ADVFGNKYSAVAAYDLSTW---NRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVKG--EFLSIISSP 189 (332)
Q Consensus 116 ~~~~~~~~~~l~~~d~~~g---~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~g--~~~~~~~~~ 189 (332)
.. .+.|.+||.+++ +....... ....++.+++.|++. ++++-...+.|..++... +....+..
T Consensus 251 ~~-----dg~i~i~d~~~~~~~~~~~~~~~-----~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~- 319 (430)
T 2xyi_A 251 AD-----DQKLMIWDTRNNNTSKPSHTVDA-----HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES- 319 (430)
T ss_dssp ET-----TSEEEEEETTCSCSSSCSEEEEC-----CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC-
T ss_pred eC-----CCeEEEEECCCCCCCcceeEeec-----CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec-
Confidence 42 467999999876 23322221 135678999999985 888888889998888653 22221111
Q ss_pred CCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCc--------cceeEEEEecCCCCCCCCeEEEeCC
Q 020019 190 LFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGE--------GEEIKLIRVAGGPLSFGDGLELLSP 260 (332)
Q Consensus 190 ~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~--------~~~~~~v~~~g~~~~~pdGi~~~~d 260 (332)
.......|+|+|++ .++++....++|..+++...... +......... .....+..+++.++
T Consensus 320 ---------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~ 389 (430)
T 2xyi_A 320 ---------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-GHTAKISDFSWNPN 389 (430)
T ss_dssp ---------CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECC-CCSSCEEEEEECSS
T ss_pred ---------CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcC-CCCCCceEEEECCC
Confidence 11245789999999 78888888888888888752110 0001112222 23345788999999
Q ss_pred Ce-EEEEeC
Q 020019 261 TK-LVVAGN 268 (332)
Q Consensus 261 G~-l~va~~ 268 (332)
+. ++++..
T Consensus 390 ~~~~l~s~s 398 (430)
T 2xyi_A 390 EPWIICSVS 398 (430)
T ss_dssp STTEEEEEE
T ss_pred CCCEEEEEE
Confidence 88 666653
No 210
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.31 E-value=8.8e-05 Score=74.11 Aligned_cols=160 Identities=12% Similarity=0.071 Sum_probs=92.0
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCe-EEEEEeCcCC---C
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR-LLVVAADVFG---N 121 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~-l~v~~~~~~~---~ 121 (332)
.+..++|+++|+++++ ..+|.|+.++..+++. . .+..........+..++++|+ |+ |.++..+... .
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~-----~--~~~~~~~~~~~~v~~~~~SpD-g~~l~~~~~~~~~~~~~ 88 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS-----T--VLIEGKKIESLRAIRYEISPD-REYALFSYNVEPIYQHS 88 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC-----E--EEECTTTTTTTTCSEEEECTT-SSEEEEEESCCCCSSSC
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcE-----E--EEeccccccccccceEEECCC-CCEEEEEecCccceeec
Confidence 4678999999996554 4578999999887763 1 233221111013678999997 66 4444332110 1
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCCC-ceEEEecCCCCCC-----c
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVKG-EFLSIISSPLFTP-----K 194 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~g-~~~~~~~~~~~~~-----p 194 (332)
..+.+++||.++++.. .+............+++.|||+ |.++.. +.|+.++.++ +..++........ +
T Consensus 89 ~~~~i~~~d~~~~~~~---~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~ 163 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDPQ---SLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLS 163 (723)
T ss_dssp CCSEEEEEESSSCCCE---ECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEECCCBTTTEEEEEC
T ss_pred ceeeEEEEECCCCceE---eccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCCCceEEEecCCCCCceECccc
Confidence 1367899999988763 2221111123467899999995 544432 6899999774 4444332211000 0
Q ss_pred cc---ccCccccCeEEEccCc-eEEEEeC
Q 020019 195 EW---YKNLVGLNGIVYHPDG-FLIVIHT 219 (332)
Q Consensus 195 ~~---~~~~~~~nGi~~~~dG-~Lyva~~ 219 (332)
.+ ...+....+++|+||| .|+++..
T Consensus 164 ~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 164 DWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp CHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred ceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 00 0001123689999999 7777654
No 211
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.31 E-value=0.00035 Score=63.81 Aligned_cols=198 Identities=9% Similarity=0.045 Sum_probs=119.8
Q ss_pred ccccceEEcC-CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEec----ccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 45 FFRECAKWDD-SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVK----DLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 45 ~~pegia~d~-~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
.....+++++ +++++++...+|.|..++..+++....... ..... .+......+..+++.++++.++++...
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-- 120 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTC-KAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF-- 120 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEE-CEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET--
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEec-cccccccccccccCCCcEEEEEEccCCCcEEEEEeC--
Confidence 3557799999 999888887789999999887653110000 00000 000011357889999843554544432
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECC---CCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcc
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA---EGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKE 195 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~---dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~ 195 (332)
.+.+..||.++++........ .....+.+.+ ++.++++-...+.|..++.. ++....+..
T Consensus 121 ---d~~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~------- 184 (408)
T 4a11_B 121 ---DKTLKVWDTNTLQTADVFNFE------ETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG------- 184 (408)
T ss_dssp ---TSEEEEEETTTTEEEEEEECS------SCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC-------
T ss_pred ---CCeEEEeeCCCCccceeccCC------CceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC-------
Confidence 357899999998877665542 2345566666 44577777778888888865 333222211
Q ss_pred cccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEec------------CCCCCCCCeEEEeCCCe
Q 020019 196 WYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA------------GGPLSFGDGLELLSPTK 262 (332)
Q Consensus 196 ~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~------------g~~~~~pdGi~~~~dG~ 262 (332)
.......++++|++ +++++-...+.|..+++..+.. ....+... .........+++.++|+
T Consensus 185 ---~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 258 (408)
T 4a11_B 185 ---HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASG---CLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL 258 (408)
T ss_dssp ---CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSC---CSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS
T ss_pred ---CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCc---ccccccccccccceeeccccccccCceeEEEEcCCCC
Confidence 11235789999999 6777777788898898875521 22222100 01123456788888887
Q ss_pred EEEEe
Q 020019 263 LVVAG 267 (332)
Q Consensus 263 l~va~ 267 (332)
.+++.
T Consensus 259 ~l~~~ 263 (408)
T 4a11_B 259 HLLTV 263 (408)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66654
No 212
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.30 E-value=0.00045 Score=63.67 Aligned_cols=199 Identities=12% Similarity=0.091 Sum_probs=122.8
Q ss_pred ccceEEcCCC-CEEEEEecCCeEEEEECCCCCCCccceeeeEEec-ccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 47 RECAKWDDSG-RRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVK-DLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 47 pegia~d~~g-~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
...+.+.+++ ..+++...++.|..+|..+++. .. .+.. .+..-......+.+.+.++.++++... .+
T Consensus 160 v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~----~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~-----D~ 228 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR----IS--IFGSEFPSGHTADVLSLSINSLNANMFISGSC-----DT 228 (380)
T ss_dssp CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE----EE--EECCCSSSSCCSCEEEEEECSSSCCEEEEEET-----TS
T ss_pred eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE----EE--EeecccCCCCccCeEEEEeecCCCCEEEEEEC-----CC
Confidence 3456677764 4566667789999999887652 11 1211 011011245778887644666665442 45
Q ss_pred eEEEEECCC-CcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccc
Q 020019 125 AVAAYDLST-WNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 125 ~l~~~d~~~-g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
.+..||++. ++.... +.+ .....+.+++.|+|+.+++-+..+.|..+|.. ++....+........ .....
T Consensus 229 ~v~~wd~~~~~~~~~~--~~~---h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~---~~~~~ 300 (380)
T 3iz6_a 229 TVRLWDLRITSRAVRT--YHG---HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRND---NELPI 300 (380)
T ss_dssp CEEEEETTTTCCCCEE--ECC---CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSC---CSSCS
T ss_pred eEEEEECCCCCcceEE--ECC---cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccc---cccCc
Confidence 688999874 333322 211 12457889999999999999999999999876 454443322111000 01224
Q ss_pred cCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEe-cCCCCCCCCeEEEeCCCeEEEEeC
Q 020019 203 LNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRV-AGGPLSFGDGLELLSPTKLVVAGN 268 (332)
Q Consensus 203 ~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~-~g~~~~~pdGi~~~~dG~l~va~~ 268 (332)
...++|+++|.+.++-..++.|+.+|...++ .+..+.. ..........+++.++|+++++..
T Consensus 301 v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~----~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYSNGDCYVWDTLLAE----MVLNLGTLQNSHEGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp CSEEEECSSSSEEEEECTTSCEEEEETTTCC----EEEEECCSCSSCCCCCCEEEECSSSSEEEEEC
T ss_pred eEEEEECCCCCEEEEEECCCCEEEEECCCCc----eEEEEecccCCCCCceEEEEECCCCCEEEEee
Confidence 6789999999666666778899999987662 3333321 111234567899999999888763
No 213
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.28 E-value=0.00021 Score=65.51 Aligned_cols=204 Identities=12% Similarity=0.076 Sum_probs=117.6
Q ss_pred cccceEEc----CCCCE-EEEEecCCeEEEEECCC------CCCCccceeeeEEec---ccCcCCCccceEEEeCCCCeE
Q 020019 46 FRECAKWD----DSGRR-FIVSFLDGGIGQVAVPD------DYPPGTVLEEVTLVK---DLELTGNGSLGLVLDHPRNRL 111 (332)
Q Consensus 46 ~pegia~d----~~g~~-~~~~~~~g~I~~vd~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~gi~vd~~~g~l 111 (332)
....+++. ++++. +++...++.|..++..+ ++... ......+.. .+......+..++++++ + +
T Consensus 123 ~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-~ 199 (397)
T 1sq9_A 123 SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN-WSPTLELQGTVESPMTPSQFATSVDISER-G-L 199 (397)
T ss_dssp CEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC-CCCEEEEEEEECCSSSSCCCCCEEEECTT-S-E
T ss_pred cEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee-ccCcceeeeeeccccCCCCCceEEEECCC-c-e
Confidence 45678999 99998 77777789988888765 33210 000001210 00101125789999997 6 4
Q ss_pred EEEEeCcCCCccceEEEEECCCCcEEEEEecC-CCCCCCCCccceEECCCCcEEEEeCCC---CeEEEEcCC-CceEEEe
Q 020019 112 LVVAADVFGNKYSAVAAYDLSTWNRLFLTQLS-GPSDGKSCADDVTVDAEGNAYVTDVTG---SKIWKVGVK-GEFLSII 186 (332)
Q Consensus 112 ~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~-~~~~~~~~~ndiavd~dG~lyvtd~~~---~~I~~v~~~-g~~~~~~ 186 (332)
+++.. ..+.+..||.++++....+... +..........++++++|+++++-... +.|..++.. ++....+
T Consensus 200 l~~~~-----~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 200 IATGF-----NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp EEEEC-----TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred EEEEe-----CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 44433 2467999999988776554430 000003457789999999877776666 889999865 5544333
Q ss_pred cCCCCCC--c-ccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecC---CC------------
Q 020019 187 SSPLFTP--K-EWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAG---GP------------ 248 (332)
Q Consensus 187 ~~~~~~~--p-~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g---~~------------ 248 (332)
..+.... . ...........++++|+|.++++-...++|..+++.++ +.+..+.... ..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~ 350 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK----ERITTLNMHCDDIEIEEDILAVDEHGD 350 (397)
T ss_dssp CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT----EEEEEEECCGGGCSSGGGCCCBCTTSC
T ss_pred ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC----ceeEEEecccCcccchhhhhccccccc
Confidence 2110000 0 00001234678999999955555567888999999876 2455454110 01
Q ss_pred ---CCCCCeEEEeCCC
Q 020019 249 ---LSFGDGLELLSPT 261 (332)
Q Consensus 249 ---~~~pdGi~~~~dG 261 (332)
......+++.++|
T Consensus 351 ~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 351 SLAEPGVFDVKFLKKG 366 (397)
T ss_dssp BCSSCCEEEEEEECTT
T ss_pred cccCCceeEEEecccc
Confidence 2446688999997
No 214
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.27 E-value=0.00074 Score=61.91 Aligned_cols=221 Identities=14% Similarity=0.111 Sum_probs=117.1
Q ss_pred ceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcC-------CCc-cceEEEeCCCCeEEEEEeCcCC
Q 020019 49 CAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELT-------GNG-SLGLVLDHPRNRLLVVAADVFG 120 (332)
Q Consensus 49 gia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~gi~vd~~~g~l~v~~~~~~~ 120 (332)
.++++ ++++|+.+ .++.|+.+|..+++. .|....... +.. ...+.++. +++|+...
T Consensus 48 ~p~v~-~~~v~~~~-~~g~v~a~d~~tG~~--------~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~v~~~---- 111 (376)
T 3q7m_A 48 HPALA-DNVVYAAD-RAGLVKALNADDGKE--------IWSVSLAEKDGWFSKEPALLSGGVTVSG--GHVYIGSE---- 111 (376)
T ss_dssp CCEEE-TTEEEEEC-TTSEEEEEETTTCCE--------EEEEECCC---CCSCCCCCEEEEEEEET--TEEEEEET----
T ss_pred ccEEE-CCEEEEEc-CCCeEEEEEccCCce--------eeeecCccccccccccCcccccCceEeC--CEEEEEcC----
Confidence 45554 35555544 468999999987762 233211100 111 23455553 89999875
Q ss_pred CccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccC
Q 020019 121 NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKN 199 (332)
Q Consensus 121 ~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~ 199 (332)
.+.|+.+|.++|+..+...+... .....+++ +|.+|+.. ..+.|+.+|+. |+......... +. ..
T Consensus 112 --~g~l~a~d~~tG~~~W~~~~~~~-----~~~~p~~~-~~~v~v~~-~~g~l~~~d~~tG~~~W~~~~~~---~~--~~ 177 (376)
T 3q7m_A 112 --KAQVYALNTSDGTVAWQTKVAGE-----ALSRPVVS-DGLVLIHT-SNGQLQALNEADGAVKWTVNLDM---PS--LS 177 (376)
T ss_dssp --TSEEEEEETTTCCEEEEEECSSC-----CCSCCEEE-TTEEEEEC-TTSEEEEEETTTCCEEEEEECCC---------
T ss_pred --CCEEEEEECCCCCEEEEEeCCCc-----eEcCCEEE-CCEEEEEc-CCCeEEEEECCCCcEEEEEeCCC---Cc--ee
Confidence 35799999999999887776321 11122333 56788864 46789999974 76543322111 00 00
Q ss_pred ccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCC-------CCCCCeEEEeCCCeEEEEeCC-ce
Q 020019 200 LVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGP-------LSFGDGLELLSPTKLVVAGNP-SA 271 (332)
Q Consensus 200 ~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~-------~~~pdGi~~~~dG~l~va~~~-~~ 271 (332)
.......+++ ++.+|+. ..++.|+.+++.+++ ..-........ +....+..+..++.+|+.... ..
T Consensus 178 ~~~~~~~~~~-~~~v~~g-~~~g~l~~~d~~tG~----~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l 251 (376)
T 3q7m_A 178 LRGESAPTTA-FGAAVVG-GDNGRVSAVLMEQGQ----MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNL 251 (376)
T ss_dssp -CCCCCCEEE-TTEEEEC-CTTTEEEEEETTTCC----EEEEEECCC-----------CCCCCCEEETTEEEEECTTSCE
T ss_pred ecCCCCcEEE-CCEEEEE-cCCCEEEEEECCCCc----EEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEE
Confidence 0111223343 5688886 346789999998773 23223222100 000111122246899998743 34
Q ss_pred EEEEcCCCceEEEEEeeecCCCcccceEEEEECCeEEEEEe
Q 020019 272 RLVESSDGWETAAVVAKFSGPVHRLATAATVKDGRVYLNHM 312 (332)
Q Consensus 272 ~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~~~g~lyv~~~ 312 (332)
..+...+| + +.-... ...+.++...+++||+...
T Consensus 252 ~~~d~~tG-~---~~w~~~---~~~~~~~~~~~~~l~~~~~ 285 (376)
T 3q7m_A 252 TALDLRSG-Q---IMWKRE---LGSVNDFIVDGNRIYLVDQ 285 (376)
T ss_dssp EEEETTTC-C---EEEEEC---CCCEEEEEEETTEEEEEET
T ss_pred EEEECCCC-c---EEeecc---CCCCCCceEECCEEEEEcC
Confidence 44555667 2 221111 1123445557888888543
No 215
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.25 E-value=0.0015 Score=64.02 Aligned_cols=202 Identities=14% Similarity=0.070 Sum_probs=107.4
Q ss_pred eEEEeCCCCeEEEEEeCcC--------CCc--cceEEEEECCCCcEEEEEecCCCCC-CCCCccc-eEEC--CCC---cE
Q 020019 101 GLVLDHPRNRLLVVAADVF--------GNK--YSAVAAYDLSTWNRLFLTQLSGPSD-GKSCADD-VTVD--AEG---NA 163 (332)
Q Consensus 101 gi~vd~~~g~l~v~~~~~~--------~~~--~~~l~~~d~~~g~~~~~~~l~~~~~-~~~~~nd-iavd--~dG---~l 163 (332)
.+++|++.+.+|+...... ... .+.|+.+|+++|+..+.++...... .....+. +.++ .+| .+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~ 318 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPL 318 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEE
Confidence 4788987799999864210 000 1358999999999998887632100 0011122 2233 256 35
Q ss_pred EEEeCCCCeEEEEcCC-CceEEEecCCC-----------CCCccc---------------ccCcc---ccCeEEEccCc-
Q 020019 164 YVTDVTGSKIWKVGVK-GEFLSIISSPL-----------FTPKEW---------------YKNLV---GLNGIVYHPDG- 212 (332)
Q Consensus 164 yvtd~~~~~I~~v~~~-g~~~~~~~~~~-----------~~~p~~---------------~~~~~---~~nGi~~~~dG- 212 (332)
++.-..+|.++.+|.. |+.+....... ...|.. .+... .=.+++++|+.
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g 398 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR 398 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence 5555567888888864 66542221100 000100 00000 11468999986
Q ss_pred eEEEEeC------------------------------------CCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEE
Q 020019 213 FLIVIHT------------------------------------FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLE 256 (332)
Q Consensus 213 ~Lyva~~------------------------------------~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~ 256 (332)
.+|+... ..+.|+.+|+.+++ .+-.+.... . ...+..
T Consensus 399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~----~~W~~~~~~-~--~~~~~~ 471 (571)
T 2ad6_A 399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK----AKWTKWEKF-A--AWGGTL 471 (571)
T ss_dssp EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC----EEEEEEESS-C--CCSBCE
T ss_pred EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC----EEEEecCCC-C--ccceeE
Confidence 9998753 24688999998873 333343331 1 111223
Q ss_pred EeCCCeEEEEeCC-ceEEEEcCCCceEEEEEeeecCC--CcccceEEEE-ECCeEEEEEecCc
Q 020019 257 LLSPTKLVVAGNP-SARLVESSDGWETAAVVAKFSGP--VHRLATAATV-KDGRVYLNHMLGF 315 (332)
Q Consensus 257 ~~~dG~l~va~~~-~~~~v~~~dg~~~~~~~~~~~~~--~~~~pt~va~-~~g~lyv~~~~g~ 315 (332)
...+|.+|+.... ....+...+| +++-.+..+ ....| +++ .+|++||...-|.
T Consensus 472 ~t~gg~v~~g~~dg~l~a~D~~tG----~~lw~~~~~~~~~~~p--~~~~~~G~~yv~~~~G~ 528 (571)
T 2ad6_A 472 YTKGGLVWYATLDGYLKALDNKDG----KELWNFKMPSGGIGSP--MTYSFKGKQYIGSMYGV 528 (571)
T ss_dssp EETTTEEEEECTTSEEEEEETTTC----CEEEEEECSSCCCSCC--EEEEETTEEEEEEEECC
T ss_pred EECCCEEEEEcCCCeEEEEECCCC----CEEEEEeCCCCcEeee--EEEEECCEEEEEEECCC
Confidence 4467889997643 3444566677 233222212 12233 344 7999999555443
No 216
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.25 E-value=0.0014 Score=60.57 Aligned_cols=200 Identities=11% Similarity=0.007 Sum_probs=118.1
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....+++.++++.+++...++.|..+|..+++. .. .+. . ......+++.+.+++++++... .+.
T Consensus 167 ~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~----~~--~~~-~----~~~v~~~~~~~~~~~~l~~~s~-----d~~ 230 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC----SL--TLS-I----EDGVTTVAVSPGDGKYIAAGSL-----DRA 230 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----EE--EEE-C----SSCEEEEEECSTTCCEEEEEET-----TSC
T ss_pred CEEEEEEcCCCCEEEEecCCCcEEEEECCCCee----EE--EEE-c----CCCcEEEEEECCCCCEEEEEcC-----CCc
Confidence 455789999999888777789999999876652 11 221 1 1256788888844765555432 356
Q ss_pred EEEEECCCCcEEEEEecCCC--CCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceE-EEecCC-CCCC-cccccCc
Q 020019 126 VAAYDLSTWNRLFLTQLSGP--SDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFL-SIISSP-LFTP-KEWYKNL 200 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~--~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~-~~~~~~-~~~~-p~~~~~~ 200 (332)
+..||.++++.......... .........+++.++|+.+++-+..+.|..++...... .....+ .... .......
T Consensus 231 v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~ 310 (393)
T 1erj_A 231 VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK 310 (393)
T ss_dssp EEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCS
T ss_pred EEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEeccc
Confidence 88999998876654422100 01124567899999999888888888888877542110 000000 0000 0000011
Q ss_pred cccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC------CCeEEEEeC
Q 020019 201 VGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS------PTKLVVAGN 268 (332)
Q Consensus 201 ~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~------dG~l~va~~ 268 (332)
.....+++++++.+.++-...+.|..++..+++ .+..+.. .......+++.+ +++++++..
T Consensus 311 ~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~----~~~~l~~---h~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 311 DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN----PLLMLQG---HRNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp SCEEEEEECGGGCEEEEEETTSEEEEEETTTCC----EEEEEEC---CSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe----EEEEECC---CCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 235689999999655666677889889988762 3433332 223344555543 677777653
No 217
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.24 E-value=2.7e-05 Score=71.15 Aligned_cols=203 Identities=9% Similarity=0.076 Sum_probs=112.0
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCC-CCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDY-PPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
....++++++++.+++...++.|..++..+++ .. ....+... ......+++.++ ++++++... .+
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~----~~~~~~~~----~~~v~~~~~~~~-~~~l~~~~~-----d~ 122 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK----QTLVLLRL----NRAATFVRWSPN-EDKFAVGSG-----AR 122 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCC----CEEECCCC----SSCEEEEECCTT-SSCCEEEES-----SS
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee----eeeEeccc----CCceEEEEECCC-CCEEEEEec-----CC
Confidence 34568999999988877778999999877654 10 10011111 125788999996 554444322 35
Q ss_pred eEEEEECCCCcEE-EEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCc----------------eEEEec
Q 020019 125 AVAAYDLSTWNRL-FLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGE----------------FLSIIS 187 (332)
Q Consensus 125 ~l~~~d~~~g~~~-~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~----------------~~~~~~ 187 (332)
.+..||.++++.. ....+..+ .....+.+++.|+|+++++-+..+.|..++.... ......
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (377)
T 3dwl_C 123 VISVCYFEQENDWWVSKHLKRP--LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCA 200 (377)
T ss_dssp CEEECCC-----CCCCEEECSS--CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEE
T ss_pred eEEEEEECCcccceeeeEeecc--cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhh
Confidence 6888999876521 01223211 1356788999999988887777787777765310 000000
Q ss_pred CCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 188 SPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 188 ~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
.+ ......+.++|+|+|.++++-...+.|..+++.+++.....+..+.. .......+++.++|+++++.
T Consensus 201 --~~------~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 201 --EY------PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKL---SQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp --CC------CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEEC---SSSCEEEEEEEETTEEEEEE
T ss_pred --cc------cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecC---CCCceEEEEEcCCCCEEEEE
Confidence 00 11234678999999954444456778888888766310000222221 22345689999999988886
Q ss_pred CCceEEEE
Q 020019 268 NPSARLVE 275 (332)
Q Consensus 268 ~~~~~~v~ 275 (332)
.....++.
T Consensus 270 ~~~~~~~~ 277 (377)
T 3dwl_C 270 YNYSPILL 277 (377)
T ss_dssp SSSSEEEE
T ss_pred cCCcEEEE
Confidence 54333333
No 218
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.23 E-value=0.00053 Score=61.62 Aligned_cols=116 Identities=12% Similarity=0.032 Sum_probs=76.9
Q ss_pred ccceEEcCC----CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 47 RECAKWDDS----GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 47 pegia~d~~----g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
...+++.++ |+++++...+|.|..++..+++. .. .+... ......+.+.++++.++++...
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~----~~--~~~~~----~~~i~~~~~~~~~~~~l~s~~~----- 136 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQC----IK--HYVGH----GNAINELKFHPRDPNLLLSVSK----- 136 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCE----EE--EEESC----CSCEEEEEECSSCTTEEEEEET-----
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceE----ee--eecCC----CCcEEEEEECCCCCCEEEEEeC-----
Confidence 456788888 56777777789999999876652 11 22211 1257899999833555554432
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK 179 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~ 179 (332)
.+.|..||.++++........ .........++++++|+.+++-...+.|..++..
T Consensus 137 dg~i~iwd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 137 DHALRLWNIQTDTLVAIFGGV--EGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp TSCEEEEETTTTEEEEEECST--TSCSSCEEEEEECTTSSEEEEEETTSCEEEEESC
T ss_pred CCeEEEEEeecCeEEEEeccc--ccccCceeEEEECCCCCEEEEecCCCCEEEEECC
Confidence 356899999988766544210 1113567889999999877777667777777654
No 219
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.22 E-value=0.0003 Score=69.61 Aligned_cols=198 Identities=12% Similarity=0.006 Sum_probs=110.3
Q ss_pred cccceEEcCCCCEEEEEecC----------CeEEEEECCC------CCCCccceeeeEEe-cccCcCCCccceEEEeCCC
Q 020019 46 FRECAKWDDSGRRFIVSFLD----------GGIGQVAVPD------DYPPGTVLEEVTLV-KDLELTGNGSLGLVLDHPR 108 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~----------g~I~~vd~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~gi~vd~~~ 108 (332)
...+++|++||+.++....+ .+|++++.++ ++. . .+. ... .....++++|+.
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~--~l~~~~~----~~~~~~~~SpDG 199 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-----R--ELSDDAH----RFVTGPRLSPDG 199 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-----E--ESSCSCS----SEECCCEECTTS
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-----e--EEEecCC----CcccCceECCCC
Confidence 45678999999866544222 4799999886 432 1 222 111 245678899973
Q ss_pred CeEEEEEeCcCC--CccceEEEEECC-CCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCC--eEEEEcCC-Cce
Q 020019 109 NRLLVVAADVFG--NKYSAVAAYDLS-TWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGS--KIWKVGVK-GEF 182 (332)
Q Consensus 109 g~l~v~~~~~~~--~~~~~l~~~d~~-~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~--~I~~v~~~-g~~ 182 (332)
..|+++..+... -....|+++|.+ +|+......+.. . .......+++.|||++|++....+ .||+++.+ |+.
T Consensus 200 ~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~-~-~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 200 RQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG-G-PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp SEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE-E-TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred CEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC-C-CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce
Confidence 345555543210 012579999998 573222222210 0 124566789999999887765555 89999985 554
Q ss_pred EEEecCC-CCCCcccccCccccCeEEEccCceEEE-EeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeE-EEeC
Q 020019 183 LSIISSP-LFTPKEWYKNLVGLNGIVYHPDGFLIV-IHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGL-ELLS 259 (332)
Q Consensus 183 ~~~~~~~-~~~~p~~~~~~~~~nGi~~~~dG~Lyv-a~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi-~~~~ 259 (332)
..+.... ....|.+ ..+...++++++|.+++ +.....+||+++++++ ..+.+... ......+ ..+.
T Consensus 278 ~~l~~~~~~~~~p~w---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~-----~~~~l~~~---~~~~~~~~s~~~ 346 (662)
T 3azo_A 278 TQLCRREEEFAGPLW---TPGMRWFAPLANGLIAVVHGKGAAVLGILDPESG-----ELVDAAGP---WTEWAATLTVSG 346 (662)
T ss_dssp EESSCCSSBSSCCCC---STTCCSEEECTTSCEEEEEBSSSCEEEEEETTTT-----EEEECCSS---CCEEEEEEEEET
T ss_pred eecccccccccCccc---cccCceEeEeCCCEEEEEEEcCccEEEEEECCCC-----cEEEecCC---CCeEEEEEecCC
Confidence 4432211 1111111 11245789999995444 4334457899998866 34433321 1223355 5555
Q ss_pred CCeEEEEe
Q 020019 260 PTKLVVAG 267 (332)
Q Consensus 260 dG~l~va~ 267 (332)
+..+|++.
T Consensus 347 ~~~~~~~~ 354 (662)
T 3azo_A 347 TRAVGVAA 354 (662)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEc
Confidence 54455544
No 220
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.21 E-value=0.0021 Score=63.21 Aligned_cols=162 Identities=11% Similarity=0.118 Sum_probs=101.0
Q ss_pred cccceEEcCCCCEEEEEecC----CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCC
Q 020019 46 FRECAKWDDSGRRFIVSFLD----GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGN 121 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~----g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~ 121 (332)
....++|+++|+.+++...+ +.|+.++. ++. .. ++... ...+..+++.|+....+++...
T Consensus 105 ~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~----~~--~l~gh----~~~v~~v~f~p~~~~~l~s~s~---- 168 (611)
T 1nr0_A 105 PVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTS----NG--NLTGQ----ARAMNSVDFKPSRPFRIISGSD---- 168 (611)
T ss_dssp CEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCB----CB--CCCCC----SSCEEEEEECSSSSCEEEEEET----
T ss_pred ceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCC----cc--eecCC----CCCceEEEECCCCCeEEEEEeC----
Confidence 34578899998877655321 46777763 321 01 12111 1257889999973333443332
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCc
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNL 200 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~ 200 (332)
.+.+..||.++++... .+.+ .....+.+++.|+|+++++-+..+.|...+.. |+....+........ ...
T Consensus 169 -D~~v~lwd~~~~~~~~--~l~~---H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~---~h~ 239 (611)
T 1nr0_A 169 -DNTVAIFEGPPFKFKS--TFGE---HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNV---AHS 239 (611)
T ss_dssp -TSCEEEEETTTBEEEE--EECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSC---SSS
T ss_pred -CCeEEEEECCCCeEee--eecc---ccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecccccccc---ccC
Confidence 3568889988776543 3321 13467889999999999998888998888854 554443321111000 012
Q ss_pred cccCeEEEccCceEEEEeCCCCeEEEEeCCCC
Q 020019 201 VGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 201 ~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
....+++|+|||.++++-...+.|..+++.++
T Consensus 240 ~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 240 GSVFGLTWSPDGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 34679999999966666667888988898876
No 221
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.20 E-value=0.0024 Score=57.71 Aligned_cols=198 Identities=12% Similarity=-0.016 Sum_probs=118.4
Q ss_pred ecCCccccceEE-----cC-CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEE
Q 020019 41 HSSSFFRECAKW-----DD-SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVV 114 (332)
Q Consensus 41 ~~~~~~pegia~-----d~-~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~ 114 (332)
.+.......+++ .+ +++++++...++.|..++..+.+...........+. + -......++++++ +.+.++
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~--~-h~~~V~~~~~~~~-~~~l~s 93 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT--G-HNHFVSDLALSQE-NCFAIS 93 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEEC--C-CSSCEEEEEECSS-TTEEEE
T ss_pred ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhc--c-CCCceEEEEECCC-CCEEEE
Confidence 343334566777 55 788888777789888888654321000000001111 1 0124678999996 665444
Q ss_pred EeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCc
Q 020019 115 AADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPK 194 (332)
Q Consensus 115 ~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p 194 (332)
... .+.+..||.++++....+.- . ......+++.|+|+.+++-+..+.|..++..++..........
T Consensus 94 ~s~-----D~~v~lwd~~~~~~~~~~~~--h---~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~--- 160 (343)
T 2xzm_R 94 SSW-----DKTLRLWDLRTGTTYKRFVG--H---QSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKEN--- 160 (343)
T ss_dssp EET-----TSEEEEEETTSSCEEEEEEC--C---CSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTS---
T ss_pred EcC-----CCcEEEEECCCCcEEEEEcC--C---CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccC---
Confidence 332 35788999999887654332 1 2456789999999988887788888888876553322111000
Q ss_pred ccccCccccCeEEEccCc----------eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEE
Q 020019 195 EWYKNLVGLNGIVYHPDG----------FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLV 264 (332)
Q Consensus 195 ~~~~~~~~~nGi~~~~dG----------~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~ 264 (332)
.......++++|++ .++++-...++|..++.... ....+.. .......+++.++|+++
T Consensus 161 ----~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-----~~~~~~~---h~~~v~~~~~s~~g~~l 228 (343)
T 2xzm_R 161 ----HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ-----IRYTFKA---HESNVNHLSISPNGKYI 228 (343)
T ss_dssp ----CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTE-----EEEEEEC---CSSCEEEEEECTTSSEE
T ss_pred ----CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCc-----eeEEEcC---ccccceEEEECCCCCEE
Confidence 11234677788775 45666666788887884321 2332321 22445678999999877
Q ss_pred EEe
Q 020019 265 VAG 267 (332)
Q Consensus 265 va~ 267 (332)
++.
T Consensus 229 ~sg 231 (343)
T 2xzm_R 229 ATG 231 (343)
T ss_dssp EEE
T ss_pred EEE
Confidence 775
No 222
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.20 E-value=0.0012 Score=63.87 Aligned_cols=212 Identities=12% Similarity=0.034 Sum_probs=125.1
Q ss_pred EEecCCcc-ccceEEcC--CCCEEEEEecCCeEEEEECCCC------CCCccceeeeEEecccCcCCCccceEEEeCCCC
Q 020019 39 HYHSSSFF-RECAKWDD--SGRRFIVSFLDGGIGQVAVPDD------YPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRN 109 (332)
Q Consensus 39 ~~~~~~~~-pegia~d~--~g~~~~~~~~~g~I~~vd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g 109 (332)
.+.+.... ...+++++ +++++++...+|.|..++..++ +.. ... .+.. .......++++++ +
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~--~~~--~~~~----~~~~v~~~~~s~~-~ 128 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVN--VKS--EFQV----LAGPISDISWDFE-G 128 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEE--EEE--EEEC----CSSCEEEEEECTT-S
T ss_pred EEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccccccccc--ccc--hhhc----ccccEEEEEEeCC-C
Confidence 33443334 67899999 9998887777899888887543 110 001 1211 1125789999997 6
Q ss_pred eEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC-CceEEEec
Q 020019 110 RLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK-GEFLSIIS 187 (332)
Q Consensus 110 ~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~-g~~~~~~~ 187 (332)
+.+++..... ...+.+..|| +++... .+.+ .....+.+++.|+|. ++++-+..+.|..++.. ++....+.
T Consensus 129 ~~l~~~~~~~-~~~~~v~~~d--~~~~~~--~~~~---~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~ 200 (615)
T 1pgu_A 129 RRLCVVGEGR-DNFGVFISWD--SGNSLG--EVSG---HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR 200 (615)
T ss_dssp SEEEEEECCS-SCSEEEEETT--TCCEEE--ECCS---CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC
T ss_pred CEEEEeccCC-CCccEEEEEE--CCCcce--eeec---CCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec
Confidence 5444433210 0125677777 445433 3321 135678899999986 78888888999998866 34333322
Q ss_pred CCCCCCcccccCccccCeEEEccC-ceEEEEeCCCCeEEEEeCCCCCCccceeEEEEec-CCCCCCCCeEEEeCCCeEEE
Q 020019 188 SPLFTPKEWYKNLVGLNGIVYHPD-GFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA-GGPLSFGDGLELLSPTKLVV 265 (332)
Q Consensus 188 ~~~~~~p~~~~~~~~~nGi~~~~d-G~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~-g~~~~~pdGi~~~~dG~l~v 265 (332)
.... .......++++|+ |.++++-...+.|..+++.+++ .+..+... .........+++. ++++++
T Consensus 201 ~~~~-------~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~v~~~~~~-~~~~l~ 268 (615)
T 1pgu_A 201 THHK-------QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE----FLKYIEDDQEPVQGGIFALSWL-DSQKFA 268 (615)
T ss_dssp SSSC-------TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC----EEEECCBTTBCCCSCEEEEEES-SSSEEE
T ss_pred ccCC-------CCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC----EeEEecccccccCCceEEEEEc-CCCEEE
Confidence 1100 0013578999999 8555555567889999988762 34433110 0122446688888 877666
Q ss_pred Ee-C-CceEEEEcCCC
Q 020019 266 AG-N-PSARLVESSDG 279 (332)
Q Consensus 266 a~-~-~~~~~v~~~dg 279 (332)
+. . ...++.....+
T Consensus 269 ~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 269 TVGADATIRVWDVTTS 284 (615)
T ss_dssp EEETTSEEEEEETTTT
T ss_pred EEcCCCcEEEEECCCC
Confidence 64 3 33444455556
No 223
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.19 E-value=0.0002 Score=64.68 Aligned_cols=189 Identities=8% Similarity=0.039 Sum_probs=109.2
Q ss_pred CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCC
Q 020019 66 GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGP 145 (332)
Q Consensus 66 g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~ 145 (332)
..|++++.++++. + .+...+. ..+.++ .+.||.++... .....|++.+++.........-
T Consensus 88 ~~Iy~i~~dg~~~-----~--~l~~~~~------~~~s~~--g~~Iy~~~~~~--~~~~~Iy~~~~dGs~~~~lt~~--- 147 (302)
T 3s25_A 88 NSLCRIKRNGHGS-----T--VLDPDPC------IYASLI--GNYIYYLHYDT--QTATSLYRIRIDGEEKKKIKNH--- 147 (302)
T ss_dssp EEEEEEETTSCCC-----E--EEECSCE------EEEEEE--TTEEEEEEESS--SSCEEEEEEETTSCCCEEEESS---
T ss_pred CeEEEEeCCCCcc-----e--EeecCCc------cEEEEe--CCEEEEEeecC--CCCceEEEEECCCCCeEEEeCC---
Confidence 5799999986652 1 3332111 234444 47899987210 0245789999875444333221
Q ss_pred CCCCCCccceEECCCC-cEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCC-C
Q 020019 146 SDGKSCADDVTVDAEG-NAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFS-G 222 (332)
Q Consensus 146 ~~~~~~~ndiavd~dG-~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~-~ 222 (332)
. . .+++++| +||+++.+.++|++.+.+|...+.+... +..+.+.|+| .||+++... .
T Consensus 148 -~--~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~-------------~~~~~~~P~g~~iy~t~~~~~~ 207 (302)
T 3s25_A 148 -Y--L----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC-------------NCYKPVVLDDTNVYYMDVNRDN 207 (302)
T ss_dssp -C--C----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS-------------CEEEEEEEETTEEEEEEGGGTT
T ss_pred -C--c----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC-------------CccceeeecCCEEEEEEcCCCc
Confidence 0 1 3346665 6999999889999999998754433211 1123466877 999999764 5
Q ss_pred eEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCC-CeEEEEeCC--ceEEEEcCCCceEEEEEeeecCCCcccceE
Q 020019 223 NLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSP-TKLVVAGNP--SARLVESSDGWETAAVVAKFSGPVHRLATA 299 (332)
Q Consensus 223 ~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~d-G~l~va~~~--~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~ 299 (332)
+|+|.++++. ..+.+ .. ..+ | .++++ +.||.+... ........||.....+... . ...
T Consensus 208 ~I~~~~ldG~-----~~~~L-t~-~~~--~---~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~----~---~~~ 268 (302)
T 3s25_A 208 AIVHVNINNP-----NPVVL-TE-ANI--E---HYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG----E---FCN 268 (302)
T ss_dssp EEEEECSSSC-----CCEEC-SC-SCE--E---EEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES----C---EEE
T ss_pred EEEEEECCCC-----CeEEE-eC-CCc--c---eEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC----c---cce
Confidence 8999999965 23322 22 122 2 25554 567776322 2222345677333333321 1 125
Q ss_pred EEEECCeEEEEEec
Q 020019 300 ATVKDGRVYLNHML 313 (332)
Q Consensus 300 va~~~g~lyv~~~~ 313 (332)
+++.+++||.+.+.
T Consensus 269 i~i~~d~Iy~td~~ 282 (302)
T 3s25_A 269 INVTSQYVYFTDFV 282 (302)
T ss_dssp EEECSSEEEEEETT
T ss_pred EEEeCCEEEEEECC
Confidence 67788999987653
No 224
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.18 E-value=0.00054 Score=65.52 Aligned_cols=213 Identities=12% Similarity=0.049 Sum_probs=110.4
Q ss_pred cccceEEcCC----CCEEEEEec--C----------CeEEEEECCCCCC-CccceeeeEEeccc-CcCCCccceEEEeCC
Q 020019 46 FRECAKWDDS----GRRFIVSFL--D----------GGIGQVAVPDDYP-PGTVLEEVTLVKDL-ELTGNGSLGLVLDHP 107 (332)
Q Consensus 46 ~pegia~d~~----g~~~~~~~~--~----------g~I~~vd~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~gi~vd~~ 107 (332)
.+-||+++|+ +.+|+.-.. . .+|.|+....+.. ..+..+...++..+ ....-....|++++|
T Consensus 70 Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpD 149 (463)
T 2wg3_C 70 GLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPD 149 (463)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTT
T ss_pred cceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCC
Confidence 3457999996 666665421 1 2788888653210 00010111233222 111123467999997
Q ss_pred CCeEEEEEeCcCC------------CccceEEEEECCCCcEEEEEecC--CC------------CCCCCCccceEECCC-
Q 020019 108 RNRLLVVAADVFG------------NKYSAVAAYDLSTWNRLFLTQLS--GP------------SDGKSCADDVTVDAE- 160 (332)
Q Consensus 108 ~g~l~v~~~~~~~------------~~~~~l~~~d~~~g~~~~~~~l~--~~------------~~~~~~~ndiavd~d- 160 (332)
|.|||+..+... ...++|+++|++.......+.++ .| .-+...|.++++|++
T Consensus 150 -G~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~t 228 (463)
T 2wg3_C 150 -GFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHP 228 (463)
T ss_dssp -SCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSC
T ss_pred -CcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCC
Confidence 999999876431 22468999988752100000000 00 013457999999997
Q ss_pred ----C--cEEEEeCCC-----CeEEEEcCCCceEEEecCCCCCCcccc-c--CccccCeEEEccC-------ceEEEEeC
Q 020019 161 ----G--NAYVTDVTG-----SKIWKVGVKGEFLSIISSPLFTPKEWY-K--NLVGLNGIVYHPD-------GFLIVIHT 219 (332)
Q Consensus 161 ----G--~lyvtd~~~-----~~I~~v~~~g~~~~~~~~~~~~~p~~~-~--~~~~~nGi~~~~d-------G~Lyva~~ 219 (332)
| .+|.+|... ..|..+.+.+.. ....|... . ....+.|+++-.. |.+++++.
T Consensus 229 g~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~y-------G~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~ 301 (463)
T 2wg3_C 229 TDININLTILCSDSNGKNRSSARILQIIKGKDY-------ESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDR 301 (463)
T ss_dssp SSTTCSEEEEEECC------CEEEEEEC----C-------CSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEET
T ss_pred CCcccceEEEecccCCCCCCCCeEeeeccCCCC-------CCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecC
Confidence 5 467788521 234444322111 01122210 0 1145778887532 45889988
Q ss_pred CCCeEEEEeCCCCCCccceeEEEEec------CCCCCCCCeEEEeCCCeEEEEeC
Q 020019 220 FSGNLFKIDIVDGVGEGEEIKLIRVA------GGPLSFGDGLELLSPTKLVVAGN 268 (332)
Q Consensus 220 ~~~~i~~id~~~~~~~~~~~~~v~~~------g~~~~~pdGi~~~~dG~l~va~~ 268 (332)
. ++|+++.++..+... ..+.+... +.....|-++++++||.|||++.
T Consensus 302 ~-g~i~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 302 N-GNFLTLQQSPVTKQW-QEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp T-SCEEEEEC-----CC-EEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred C-CcEEEEEeCCCCcee-eEEEeecCCcccccccccCcceEEEECCCCCEEEEec
Confidence 6 789999887432111 12222111 11235688999999999999974
No 225
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.16 E-value=0.00045 Score=61.69 Aligned_cols=232 Identities=9% Similarity=-0.015 Sum_probs=131.0
Q ss_pred cccceEEcCCCC-EEEEEecCCeEEEEEC-CCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 46 FRECAKWDDSGR-RFIVSFLDGGIGQVAV-PDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 46 ~pegia~d~~g~-~~~~~~~~g~I~~vd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
....++++++++ .+++...++.|..++. .+++. . .+...+. ......+++.+ .+.++.+.. .
T Consensus 58 ~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-----~--~~~~~~~--~~~v~~l~~~~-~~~l~s~~~------d 121 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-----Q--ALTNNEA--NLGICRICKYG-DDKLIAASW------D 121 (342)
T ss_dssp CEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-----E--ECBSCCC--CSCEEEEEEET-TTEEEEEET------T
T ss_pred ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-----E--eccccCC--CCceEEEEeCC-CCEEEEEcC------C
Confidence 556789999999 7777777899999998 75541 1 2221001 12567899998 466665554 3
Q ss_pred ceEEEEECCC---------CcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCC--c-eEEEecCCCC
Q 020019 124 SAVAAYDLST---------WNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG--E-FLSIISSPLF 191 (332)
Q Consensus 124 ~~l~~~d~~~---------g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g--~-~~~~~~~~~~ 191 (332)
+.|..||.++ ++... .+. .......+++.+++ +++ -...+.|..++... + ........
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~--~~~----~~~~v~~~~~~~~~-l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~-- 191 (342)
T 1yfq_A 122 GLIEVIDPRNYGDGVIAVKNLNSN--NTK----VKNKIFTMDTNSSR-LIV-GMNNSQVQWFRLPLCEDDNGTIEESG-- 191 (342)
T ss_dssp SEEEEECHHHHTTBCEEEEESCSS--SSS----SCCCEEEEEECSSE-EEE-EESTTEEEEEESSCCTTCCCEEEECS--
T ss_pred CeEEEEcccccccccccccCCeee--EEe----eCCceEEEEecCCc-EEE-EeCCCeEEEEECCccccccceeeecC--
Confidence 5688899865 33221 111 12456789999887 444 45567888888654 1 11111110
Q ss_pred CCcccccCccccCeEEEcc-CceEEEEeCCCCeEEEEeCCCC--CCccceeEEEEecCC------CCCCCCeEEEeCCCe
Q 020019 192 TPKEWYKNLVGLNGIVYHP-DGFLIVIHTFSGNLFKIDIVDG--VGEGEEIKLIRVAGG------PLSFGDGLELLSPTK 262 (332)
Q Consensus 192 ~~p~~~~~~~~~nGi~~~~-dG~Lyva~~~~~~i~~id~~~~--~~~~~~~~~v~~~g~------~~~~pdGi~~~~dG~ 262 (332)
.......++++| ++.++++-...+.|..++.+.. .........+..... .......+++.++|+
T Consensus 192 -------~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 264 (342)
T 1yfq_A 192 -------LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK 264 (342)
T ss_dssp -------CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC
T ss_pred -------CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC
Confidence 123467899999 9955555556777777666543 100013333432210 012466889999988
Q ss_pred EEEEe-C-CceEEEEcCCCceEEEEEeeecCCCcccceEEEEECCeEEE-EEecCc
Q 020019 263 LVVAG-N-PSARLVESSDGWETAAVVAKFSGPVHRLATAATVKDGRVYL-NHMLGF 315 (332)
Q Consensus 263 l~va~-~-~~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~~~g~lyv-~~~~g~ 315 (332)
++++. . +..++....++ +....+....-...++++ .++++++ +...|.
T Consensus 265 ~l~~~~~dg~i~vwd~~~~----~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 265 FLYTAGSDGIISCWNLQTR----KKIKNFAKFNEDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp CEEEEETTSCEEEEETTTT----EEEEECCCCSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred EEEEecCCceEEEEcCccH----hHhhhhhcccCCCceEec-CCCCeEEEEecCCc
Confidence 66664 3 33454455656 333333321012235566 6665554 555544
No 226
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.15 E-value=0.00059 Score=67.45 Aligned_cols=191 Identities=18% Similarity=0.184 Sum_probs=108.2
Q ss_pred eEEc--CCCCE-EEEE-ecCCeEEEEECC--C-CCCCccceeeeEEecccCc-CCCccceEEEeCCCCeEEEEEeCcC--
Q 020019 50 AKWD--DSGRR-FIVS-FLDGGIGQVAVP--D-DYPPGTVLEEVTLVKDLEL-TGNGSLGLVLDHPRNRLLVVAADVF-- 119 (332)
Q Consensus 50 ia~d--~~g~~-~~~~-~~~g~I~~vd~~--~-~~~~~~~~~~~~~~~~~~~-~~~~~~gi~vd~~~g~l~v~~~~~~-- 119 (332)
..+. |||+. ++.. ..+.+|+.++.+ + ++. . .+...+.. ......+++++|+..+|+++..+..
T Consensus 82 ~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~-----~--~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 154 (662)
T 3azo_A 82 WAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP-----R--PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGE 154 (662)
T ss_dssp EEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC-----E--ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSS
T ss_pred ceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC-----E--eccCCccCCCCccccCcEECCCCCEEEEEEecccCC
Confidence 4354 88876 4444 446789999976 3 432 1 22211110 0124578899998445665553210
Q ss_pred --CCccceEEEEECCC------CcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCC-------CCeEEEEcCC--C-
Q 020019 120 --GNKYSAVAAYDLST------WNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVT-------GSKIWKVGVK--G- 180 (332)
Q Consensus 120 --~~~~~~l~~~d~~~------g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~-------~~~I~~v~~~--g- 180 (332)
......|++||.++ ++.. .+.. ........+++.|||+ |+++... ...|+.++.+ |
T Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~---~l~~--~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 155 GPSDVRRFLAAVPLDGSAAADRSAVR---ELSD--DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp STTCEEEEEEEEETTSTTTTCGGGSE---ESSC--SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred CCCCceeEEEEEECCCCccccCCcee---EEEe--cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 01235799999987 6653 2310 1124567789999996 6555432 2578888876 4
Q ss_pred --ceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCC--eEEEEeCCCCCCccceeEEEEecCCCCC------
Q 020019 181 --EFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSG--NLFKIDIVDGVGEGEEIKLIRVAGGPLS------ 250 (332)
Q Consensus 181 --~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~--~i~~id~~~~~~~~~~~~~v~~~g~~~~------ 250 (332)
+...+.... ......++|+|||.+|++....+ +||++++++++ .+.+........
T Consensus 230 ~~~~~~l~~~~----------~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~-----~~~l~~~~~~~~~p~w~~ 294 (662)
T 3azo_A 230 FADTRTLLGGP----------EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA-----ATQLCRREEEFAGPLWTP 294 (662)
T ss_dssp EEEEEEEEEET----------TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC-----EEESSCCSSBSSCCCCST
T ss_pred ccccEEeCCCC----------CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc-----eeecccccccccCccccc
Confidence 333332210 12346789999996666555455 89999987652 222211101111
Q ss_pred CCCeEEEeCCCeEEEEe
Q 020019 251 FGDGLELLSPTKLVVAG 267 (332)
Q Consensus 251 ~pdGi~~~~dG~l~va~ 267 (332)
....+++.++|+++++.
T Consensus 295 ~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 295 GMRWFAPLANGLIAVVH 311 (662)
T ss_dssp TCCSEEECTTSCEEEEE
T ss_pred cCceEeEeCCCEEEEEE
Confidence 13467887888888775
No 227
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.14 E-value=0.0038 Score=55.40 Aligned_cols=209 Identities=9% Similarity=0.004 Sum_probs=124.9
Q ss_pred EecCCccccceEEcCC-CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCc
Q 020019 40 YHSSSFFRECAKWDDS-GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADV 118 (332)
Q Consensus 40 ~~~~~~~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~ 118 (332)
+.+..-....++++|+ ++++++...++.|..++..+.+....... ..+. + -...+..+.+.++ ++++++...
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~--~~l~--~-h~~~V~~~~~s~d-g~~l~s~~~- 106 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQ--RALR--G-HSHFVSDVVISSD-GQFALSGSW- 106 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEE--EEEC--C-CSSCEEEEEECTT-SSEEEEEET-
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceee--EEEe--C-CCCCEEEEEECCC-CCEEEEEcc-
Confidence 3444445678999998 57777777789888888765442100000 1111 0 0125788999997 665544332
Q ss_pred CCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCccccc
Q 020019 119 FGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 119 ~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~ 198 (332)
.+.+..|+............ ...........++++.+++-+..+.+..++..+..........
T Consensus 107 ----d~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~-------- 169 (340)
T 4aow_A 107 ----DGTLRLWDLTTGTTTRRFVG-----HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDES-------- 169 (340)
T ss_dssp ----TSEEEEEETTTTEEEEEEEC-----CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSS--------
T ss_pred ----cccceEEeecccceeeeecC-----CCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEecc--------
Confidence 35688899887665544332 1244556778888887777777788888887654332221111
Q ss_pred CccccCeEEEccCc--eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC--CceEEE
Q 020019 199 NLVGLNGIVYHPDG--FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN--PSARLV 274 (332)
Q Consensus 199 ~~~~~nGi~~~~dG--~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~--~~~~~v 274 (332)
.......+++++++ .++++-...+.|..++..+++ .+..+.. .......+++.++|+++++.. ...++.
T Consensus 170 ~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~----~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~Dg~i~iw 242 (340)
T 4aow_A 170 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK----LKTNHIG---HTGYLNTVTVSPDGSLCASGGKDGQAMLW 242 (340)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE----EEEEECC---CSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred ccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc----eeeEecC---CCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 11234577888776 566666677888888888762 3332221 223456889999998887753 233333
Q ss_pred EcCCC
Q 020019 275 ESSDG 279 (332)
Q Consensus 275 ~~~dg 279 (332)
....+
T Consensus 243 d~~~~ 247 (340)
T 4aow_A 243 DLNEG 247 (340)
T ss_dssp ETTTT
T ss_pred EeccC
Confidence 44444
No 228
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.13 E-value=0.0013 Score=61.58 Aligned_cols=189 Identities=8% Similarity=0.053 Sum_probs=118.9
Q ss_pred cccceEEcCC-CCEEEEEecCCeEEEEECCCC--------CCCccceeeeEEecccCcCCCccceEEEeCCCCe-EEEEE
Q 020019 46 FRECAKWDDS-GRRFIVSFLDGGIGQVAVPDD--------YPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR-LLVVA 115 (332)
Q Consensus 46 ~pegia~d~~-g~~~~~~~~~g~I~~vd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~-l~v~~ 115 (332)
.+..+++.++ ++++++...+|.|..++.... ... ... .+... ...+.+|.++++ +. ++++.
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~--~~~--~~~~h----~~~v~~l~~~~~-~~~~l~s~ 200 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQ--PDL--RLRGH----QKEGYGLSWNPN-LNGYLLSA 200 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCC--CSE--EEECC----SSCCCCEEECTT-STTEEEEE
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCC--CcE--EecCC----CCCeEEEEeCCC-CCCeEEEE
Confidence 5677999998 556666677899999987641 000 011 22211 125688999996 44 44443
Q ss_pred eCcCCCccceEEEEECCCCcE----EE-EEecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCCCc----eEEE
Q 020019 116 ADVFGNKYSAVAAYDLSTWNR----LF-LTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVKGE----FLSI 185 (332)
Q Consensus 116 ~~~~~~~~~~l~~~d~~~g~~----~~-~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~g~----~~~~ 185 (332)
.. .+.|.+||.+++.. .. ...+. ......+++++.| +++++++....+.|..++.... ....
T Consensus 201 ~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~ 272 (430)
T 2xyi_A 201 SD-----DHTICLWDINATPKEHRVIDAKNIFT---GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHT 272 (430)
T ss_dssp CT-----TSCEEEEETTSCCBGGGEEECSEEEC---CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEE
T ss_pred eC-----CCeEEEEeCCCCCCCCceeccceeec---CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeE
Confidence 32 35688999987321 11 11221 1135678899999 4679999888999999887632 1111
Q ss_pred ecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-E
Q 020019 186 ISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-L 263 (332)
Q Consensus 186 ~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l 263 (332)
+.. ....++.|+|+|++ .++++-...+.|..+++...+ ..+..+.. .......+++.++|+ +
T Consensus 273 ~~~----------~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~---~~~~~~~~---h~~~v~~i~~sp~~~~~ 336 (430)
T 2xyi_A 273 VDA----------HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK---LKLHSFES---HKDEIFQVQWSPHNETI 336 (430)
T ss_dssp EEC----------CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT---SCSEEEEC---CSSCEEEEEECSSCTTE
T ss_pred eec----------CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC---CCeEEeec---CCCCEEEEEECCCCCCE
Confidence 111 12357899999999 788888888999999998642 13444442 224566889999874 5
Q ss_pred EEEe
Q 020019 264 VVAG 267 (332)
Q Consensus 264 ~va~ 267 (332)
+++.
T Consensus 337 l~s~ 340 (430)
T 2xyi_A 337 LASS 340 (430)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
No 229
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.13 E-value=0.00046 Score=61.96 Aligned_cols=118 Identities=11% Similarity=0.063 Sum_probs=76.7
Q ss_pred cCCccccceEEcCC---CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCc
Q 020019 42 SSSFFRECAKWDDS---GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADV 118 (332)
Q Consensus 42 ~~~~~pegia~d~~---g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~ 118 (332)
+.......++++++ |+.+++...+|.|..++..+... ... ..+.... .....+++.++ ++.+++...
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---~~~-~~~~~h~----~~v~~~~~~~~-~~~l~s~~~- 106 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIP-KAQQMHT----GPVLDVCWSDD-GSKVFTASC- 106 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---EEE-EEEEECS----SCEEEEEECTT-SSEEEEEET-
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---eeE-EEecccc----CCEEEEEECcC-CCEEEEEcC-
Confidence 33346678999999 57777777789999998875231 111 1222111 25789999996 554444321
Q ss_pred CCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEE--CCCCcEEEEeCCCCeEEEEcCC
Q 020019 119 FGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTV--DAEGNAYVTDVTGSKIWKVGVK 179 (332)
Q Consensus 119 ~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiav--d~dG~lyvtd~~~~~I~~v~~~ 179 (332)
.+.+..||.++++....... ......+++ .++|+++++-+..+.|..++..
T Consensus 107 ----dg~v~iwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 107 ----DKTAKMWDLSSNQAIQIAQH------DAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp ----TSEEEEEETTTTEEEEEEEC------SSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred ----CCcEEEEEcCCCCceeeccc------cCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 35789999998876654332 244667888 8888877776667777777643
No 230
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.12 E-value=0.0037 Score=55.27 Aligned_cols=193 Identities=13% Similarity=0.088 Sum_probs=112.2
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCC-CCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHP-RNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~-~g~l~v~~~~~~~~~~~ 124 (332)
....++++++|+.+++...++.|..++..+.... ... ++.... .....+++.++ +++++++... .+
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~--~~~--~l~gH~----~~V~~v~~s~~~~g~~l~s~s~-----D~ 77 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHK--LID--TLTGHE----GPVWRVDWAHPKFGTILASCSY-----DG 77 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBC--CCE--EECCCS----SCEEEEEECCGGGCSEEEEEET-----TT
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcE--EEE--EEcccc----CCeEEEEecCCCcCCEEEEEcC-----CC
Confidence 4467899999998888877899998887643210 011 222111 24678888642 2554544432 35
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC--CcEEEEeCCCCeEEEEcCCCc--e-EEEecCCCCCCcccccC
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE--GNAYVTDVTGSKIWKVGVKGE--F-LSIISSPLFTPKEWYKN 199 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d--G~lyvtd~~~~~I~~v~~~g~--~-~~~~~~~~~~~p~~~~~ 199 (332)
.+.+||.++++......+.. .....+.+++.|+ |.++++-+..+.|..++.... . ...+.. .
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~---h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~----------h 144 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAV---HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA----------H 144 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECC---CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC----------C
T ss_pred EEEEEEcCCCceEEEEEeec---CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec----------c
Confidence 78899998775322222321 1245778999997 778888777888877775421 1 111110 1
Q ss_pred ccccCeEEEccC-------------ceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCC---eE
Q 020019 200 LVGLNGIVYHPD-------------GFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPT---KL 263 (332)
Q Consensus 200 ~~~~nGi~~~~d-------------G~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG---~l 263 (332)
....+.++|+|+ +.++++-...++|..++..++.. .......+.+ .......+++.|++ ++
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~--~~~~~~~l~~-H~~~V~~v~~sp~~~~~~~ 221 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ--TYVLESTLEG-HSDWVRDVAWSPTVLLRSY 221 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTT--EEEEEEEECC-CSSCEEEEEECCCCSSSEE
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCc--eEEEEEEecC-CCCceEEEEECCCCCCceE
Confidence 123567788876 44566666677777677665421 0111112332 33456788898874 66
Q ss_pred EEEe
Q 020019 264 VVAG 267 (332)
Q Consensus 264 ~va~ 267 (332)
+++.
T Consensus 222 las~ 225 (297)
T 2pm7_B 222 MASV 225 (297)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
No 231
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.0019 Score=66.82 Aligned_cols=202 Identities=11% Similarity=0.022 Sum_probs=127.7
Q ss_pred CccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 44 SFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
......++++++|+++.+...+|.|..++..+.+. ... ... ......+++.+ ...|..+.. .
T Consensus 17 ~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~--------~~~-~~~--~~~V~~l~fsp-g~~L~S~s~------D 78 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEV--------VIK-LED--RSAIKEMRFVK-GIYLVVINA------K 78 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEE--------EEE-CSS--CCCEEEEEEET-TTEEEEEET------T
T ss_pred CCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEE--------EEE-cCC--CCCEEEEEEcC-CCEEEEEEC------c
Confidence 33567899999999888877889999998764431 111 111 12578999998 233444433 3
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEE-EecC------CCCCCccc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLS-IISS------PLFTPKEW 196 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~-~~~~------~~~~~p~~ 196 (332)
+.|.+||.++++....+.. ......++++|+|+..++-+..+.|..+|.++.... +... ..+.
T Consensus 79 ~~v~lWd~~~~~~~~~~~~------~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~---- 148 (902)
T 2oaj_A 79 DTVYVLSLYSQKVLTTVFV------PGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA---- 148 (902)
T ss_dssp CEEEEEETTTCSEEEEEEC------SSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS----
T ss_pred CeEEEEECCCCcEEEEEcC------CCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc----
Confidence 5789999998887655542 134678999999987777777888988987744321 1100 0110
Q ss_pred ccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEec---CCC------------CCCCCeEEEeCC
Q 020019 197 YKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA---GGP------------LSFGDGLELLSP 260 (332)
Q Consensus 197 ~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~---g~~------------~~~pdGi~~~~d 260 (332)
........|+|+|++ .++++-...+.| .+|+.+++ .+..+... +.. ......+++.++
T Consensus 149 -~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd 222 (902)
T 2oaj_A 149 -ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE----IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN 222 (902)
T ss_dssp -SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE----EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred -cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc----eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence 012346899999975 555556677888 89988762 33333321 000 123567899999
Q ss_pred CeEEEEeC--CceEEEEcCCC
Q 020019 261 TKLVVAGN--PSARLVESSDG 279 (332)
Q Consensus 261 G~l~va~~--~~~~~v~~~dg 279 (332)
|+++++.. ...++-...+|
T Consensus 223 g~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 223 SLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp SSEEEEEETTCCEEEEETTTC
T ss_pred CCEEEEEECCCeEEEEECCCC
Confidence 99888753 33444455555
No 232
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.11 E-value=0.00016 Score=64.87 Aligned_cols=192 Identities=11% Similarity=0.078 Sum_probs=110.3
Q ss_pred EEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEE----EeCCCCeEEEEEeCcCCCccceE
Q 020019 51 KWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLV----LDHPRNRLLVVAADVFGNKYSAV 126 (332)
Q Consensus 51 a~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~----vd~~~g~l~v~~~~~~~~~~~~l 126 (332)
+++++++.+++...++.|..++..+++.. .. .+....+........+. ++++ ++++++... .+.+
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~---~~--~~~~~~~~~~~~v~~~~~~~~~~~~-~~~l~~~~~-----d~~i 192 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDP---VA--NMEPVQGENKRDCWTVAFGNAYNQE-ERVVCAGYD-----NGDI 192 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSC---SE--EECCCTTSCCCCEEEEEEECCCC-C-CCEEEEEET-----TSEE
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCc---ce--eccccCCCCCCceEEEEEEeccCCC-CCEEEEEcc-----CCeE
Confidence 55788988887777899999998766521 11 22211111112345565 5565 554554432 3579
Q ss_pred EEEECCCCcEEEEEecCCCCCCCCCccceEECC---CCcEEEEeCCCCeEEEEcCCCc-eEEEecCCCCCCcccccCccc
Q 020019 127 AAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA---EGNAYVTDVTGSKIWKVGVKGE-FLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 127 ~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~---dG~lyvtd~~~~~I~~v~~~g~-~~~~~~~~~~~~p~~~~~~~~ 202 (332)
..||.++++....... ......+++.| +++.+++-...+.|..++.... ....+....+ ......
T Consensus 193 ~i~d~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~~~~~~ 261 (357)
T 3i2n_A 193 KLFDLRNMALRWETNI------KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSE-----KAHKST 261 (357)
T ss_dssp EEEETTTTEEEEEEEC------SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEE-----ECCSSC
T ss_pred EEEECccCceeeecCC------CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeecc-----CCCcCC
Confidence 9999998877544333 24567899999 8887777777888888775421 1000000000 001234
Q ss_pred cCeEEEccCce-EEEEeCCCCeEEEEeCCCCCCc------cc------eeEEE-EecCCCCCCCCeEEEeCCCeEEE
Q 020019 203 LNGIVYHPDGF-LIVIHTFSGNLFKIDIVDGVGE------GE------EIKLI-RVAGGPLSFGDGLELLSPTKLVV 265 (332)
Q Consensus 203 ~nGi~~~~dG~-Lyva~~~~~~i~~id~~~~~~~------~~------~~~~v-~~~g~~~~~pdGi~~~~dG~l~v 265 (332)
...++++|+|. ++++-...+.|..+++..+... +. ..+.+ ... ........+++.++|++++
T Consensus 262 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~ 337 (357)
T 3i2n_A 262 VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT-LSTQPISSLDWSPDKRGLC 337 (357)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE-CCSSCEEEEEECSSSTTEE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccc-cCCCCeeEEEEcCCCCeEE
Confidence 67899999994 7777777888877776643210 00 00111 122 1223456788888887555
No 233
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.10 E-value=0.0011 Score=61.56 Aligned_cols=175 Identities=7% Similarity=0.011 Sum_probs=102.1
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEeccc-CcC--CCccceEEEeCCCC-eEEEEEeCcCC
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDL-ELT--GNGSLGLVLDHPRN-RLLVVAADVFG 120 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~gi~vd~~~g-~l~v~~~~~~~ 120 (332)
.....++++++++.+++. .++.|..++...... ... .+...+ ... ......++++++ + .++++...
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~---~~~--~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~s~~~--- 247 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DDLRINLWHLEITDR---SFN--IVDIKPANMEELTEVITAAEFHPN-SCNTFVYSSS--- 247 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEE---EEE--EEECCCSSGGGCCCCEEEEEECSS-CTTEEEEEET---
T ss_pred cceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCc---eee--eeecccccccccCcceEEEEECCC-CCcEEEEEeC---
Confidence 356789999999988887 789999999863321 011 110011 111 125789999997 5 55554432
Q ss_pred CccceEEEEECCCCcE----EEEEecCC-CCCC------CCCccceEECCCCcEEEEeCCCCeEEEEcCC--CceEEEec
Q 020019 121 NKYSAVAAYDLSTWNR----LFLTQLSG-PSDG------KSCADDVTVDAEGNAYVTDVTGSKIWKVGVK--GEFLSIIS 187 (332)
Q Consensus 121 ~~~~~l~~~d~~~g~~----~~~~~l~~-~~~~------~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~--g~~~~~~~ 187 (332)
.+.|..||.++++. ...+.... +... ....+.+++.|+|+++++-+. +.|..++.. ++....+.
T Consensus 248 --dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 248 --KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp --TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE
T ss_pred --CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee
Confidence 35689999988774 33332210 0000 025778999999987777666 888888865 33221111
Q ss_pred CCCCCCcc-----cccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCC
Q 020019 188 SPLFTPKE-----WYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 188 ~~~~~~p~-----~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
........ ..........++|+|+|..+++-...+.|..++..++
T Consensus 325 ~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 325 VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 11000000 0000011234999999954566677889999998876
No 234
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.10 E-value=0.0005 Score=68.60 Aligned_cols=153 Identities=8% Similarity=-0.007 Sum_probs=85.2
Q ss_pred ccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEE-eCCCC----
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVT-DVTGS---- 171 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvt-d~~~~---- 171 (332)
....+.+.|+ |++++...... .....|+.||.++++............-...+..+++.|||+ |++. ....+
T Consensus 256 ~~~~~~~SpD-g~~l~~~~~~~-~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 333 (723)
T 1xfd_A 256 YITMVKWATS-TKVAVTWLNRA-QNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGK 333 (723)
T ss_dssp EEEEEEESSS-SEEEEEEEETT-SCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSC
T ss_pred eeEEEEEeCC-CeEEEEEEcCC-CCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcc
Confidence 3467899997 87654432211 124578899999988655443211010001134789999996 6654 44444
Q ss_pred --eEEEEc-CCCce---EEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCC----CCeEEEEeCCCCCCccceeE
Q 020019 172 --KIWKVG-VKGEF---LSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTF----SGNLFKIDIVDGVGEGEEIK 240 (332)
Q Consensus 172 --~I~~v~-~~g~~---~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~----~~~i~~id~~~~~~~~~~~~ 240 (332)
.|+.++ .++.. ...+..... .....++|+||| .||++... ..+||+++..++. ...
T Consensus 334 ~~~l~~~d~~~~~~~~~~~~l~~~~~---------~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~----~~~ 400 (723)
T 1xfd_A 334 FYHITVSSSQPNSSNDNIQSITSGDW---------DVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF----NRQ 400 (723)
T ss_dssp EEEEEEECSSCCSSSCCCCBSCCSSS---------CEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTC----CCB
T ss_pred eeEEEEEeccCCCCccceeEeecCCe---------EEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCC----Ccc
Confidence 788998 44332 221111100 111236899999 88876553 3568888876431 111
Q ss_pred EEEecCC--CCCCCCeEEEeCCCeEEEEe
Q 020019 241 LIRVAGG--PLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 241 ~v~~~g~--~~~~pdGi~~~~dG~l~va~ 267 (332)
.+.+. +......+++++||+.++..
T Consensus 401 --~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 401 --CLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp --CSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred --eecccccCCCCeEEEEECCCCCEEEEE
Confidence 12110 11335678999998866653
No 235
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.09 E-value=0.00041 Score=70.26 Aligned_cols=191 Identities=13% Similarity=0.089 Sum_probs=117.3
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCC-Ce-EEEEEeCcCCCcc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPR-NR-LLVVAADVFGNKY 123 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~-g~-l~v~~~~~~~~~~ 123 (332)
....++++++|+.+++...+|.|..++..++.. +...... + -......+.+.++. ++ ++.+.. .
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~-----~~~~~l~--~-h~~~V~~l~~s~~~~~~~l~s~s~------D 76 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-----KLIDTLT--G-HEGPVWRVDWAHPKFGTILASCSY------D 76 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEE-----EEEEEEC--C-CSSCEEEEEECCTTSCSEEEEEET------T
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCC-----ccceecc--C-CcCceEEEEecCCCCCCEEEEEeC------C
Confidence 456788999999888777789998888764321 1011111 1 01256789987641 44 444433 3
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC--CcEEEEeCCCCeEEEEcCCCc---eEEEecCCCCCCccccc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE--GNAYVTDVTGSKIWKVGVKGE---FLSIISSPLFTPKEWYK 198 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d--G~lyvtd~~~~~I~~v~~~g~---~~~~~~~~~~~~p~~~~ 198 (332)
+.|..||.++++......+.. .......+++.|+ |+++++-+..+.|..++.... .......
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~---h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~---------- 143 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAV---HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA---------- 143 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECC---CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC----------
T ss_pred CeEEEEECCCCcccccccccC---CCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec----------
Confidence 568899998876444344421 1356788999999 888888888898888886532 1111111
Q ss_pred CccccCeEEEcc-------------CceEEEEeCCCCeEEEEeCCCCCCccceeEEE-EecCCCCCCCCeEEEeCC---C
Q 020019 199 NLVGLNGIVYHP-------------DGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLI-RVAGGPLSFGDGLELLSP---T 261 (332)
Q Consensus 199 ~~~~~nGi~~~~-------------dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v-~~~g~~~~~pdGi~~~~d---G 261 (332)
.......++++| ++.++++-...+.|..++..++.. ..... ... ........+++.++ |
T Consensus 144 ~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~---~~~~~~~~~-~h~~~V~~l~~sp~~~~~ 219 (753)
T 3jro_A 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ---TYVLESTLE-GHSDWVRDVAWSPTVLLR 219 (753)
T ss_dssp CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTT---EEEEEEEEC-CCSSCEEEEEECCCCSSS
T ss_pred CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcc---cceeeeeec-CCCCcEEEEEeccCCCCC
Confidence 112456888888 575555555677788787775421 11111 222 12345678999998 8
Q ss_pred eEEEEe
Q 020019 262 KLVVAG 267 (332)
Q Consensus 262 ~l~va~ 267 (332)
+++++.
T Consensus 220 ~~l~s~ 225 (753)
T 3jro_A 220 SYLASV 225 (753)
T ss_dssp EEEEEE
T ss_pred CEEEEE
Confidence 877775
No 236
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.09 E-value=0.0011 Score=59.29 Aligned_cols=193 Identities=10% Similarity=0.029 Sum_probs=111.4
Q ss_pred ecCCccccceEEcCCCCEEEEE-ec---CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCC--Ce-EEE
Q 020019 41 HSSSFFRECAKWDDSGRRFIVS-FL---DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPR--NR-LLV 113 (332)
Q Consensus 41 ~~~~~~pegia~d~~g~~~~~~-~~---~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~--g~-l~v 113 (332)
.+.......+++++++..+++. .. ++.|..++..+++. .. ....... .....+++.++. +. |+.
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~----~~-~~~~~~~----~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL----KL-LREIEKA----KPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE----EE-EEEEEES----SCEEEEECTTCCTTTCCEEE
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc----cc-eeeeccc----CcEEEEEEcCCCCCCceEEE
Confidence 3444466789999999766544 43 78899998876652 11 0111111 256788998862 34 444
Q ss_pred EEeCcCCCccceEEEEECCCCc-EEEEEecCCCCCCCCCccce------EECCCCcEEEEeCCCCeEEEEcCCC-c-eEE
Q 020019 114 VAADVFGNKYSAVAAYDLSTWN-RLFLTQLSGPSDGKSCADDV------TVDAEGNAYVTDVTGSKIWKVGVKG-E-FLS 184 (332)
Q Consensus 114 ~~~~~~~~~~~~l~~~d~~~g~-~~~~~~l~~~~~~~~~~ndi------avd~dG~lyvtd~~~~~I~~v~~~g-~-~~~ 184 (332)
+.. .+.+..||.++++ ......- . ......+ ++.++|+.+++-+..+.|..++... + ...
T Consensus 86 ~~~------dg~i~iwd~~~~~~~~~~~~~--~---~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 86 GDF------GGNLHIWNLEAPEMPVYSVKG--H---KEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVA 154 (357)
T ss_dssp EET------TSCEEEECTTSCSSCSEEECC--C---SSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSE
T ss_pred ecC------CCeEEEEeCCCCCccEEEEEe--c---ccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcce
Confidence 433 3568899998876 4332221 1 1233344 5678898888878888888888763 2 222
Q ss_pred EecCCCCCCcccccCccccCeEE----EccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeC-
Q 020019 185 IISSPLFTPKEWYKNLVGLNGIV----YHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLS- 259 (332)
Q Consensus 185 ~~~~~~~~~p~~~~~~~~~nGi~----~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~- 259 (332)
.+...... .......++ +++++.++++-...+.|..+++.+++ ....... ......+++.+
T Consensus 155 ~~~~~~~~------~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~----~~~v~~~~~~~~ 220 (357)
T 3i2n_A 155 NMEPVQGE------NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA----LRWETNI----KNGVCSLEFDRK 220 (357)
T ss_dssp EECCCTTS------CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE----EEEEEEC----SSCEEEEEESCS
T ss_pred eccccCCC------CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc----eeeecCC----CCceEEEEcCCC
Confidence 22111110 011234555 67899555555667899999998762 2222222 23466888887
Q ss_pred --CCeEEEEe
Q 020019 260 --PTKLVVAG 267 (332)
Q Consensus 260 --dG~l~va~ 267 (332)
+++.+++.
T Consensus 221 ~~~~~~l~~~ 230 (357)
T 3i2n_A 221 DISMNKLVAT 230 (357)
T ss_dssp SSSCCEEEEE
T ss_pred CCCCCEEEEE
Confidence 76665554
No 237
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.08 E-value=0.00026 Score=64.02 Aligned_cols=196 Identities=8% Similarity=-0.038 Sum_probs=114.5
Q ss_pred cccceEEcCC--CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCC--CCeEEEEEeCcCCC
Q 020019 46 FRECAKWDDS--GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHP--RNRLLVVAADVFGN 121 (332)
Q Consensus 46 ~pegia~d~~--g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~--~g~l~v~~~~~~~~ 121 (332)
....+++.++ ++.+++...++.|..++..+++. .. ..... . .......+++.++ ...++++..
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~----~~-~~~~~--~-~~~~v~~~~~~~~~~~~~l~~~~~----- 123 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW----SQ-IAVHA--V-HSASVNSVQWAPHEYGPLLLVASS----- 123 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE----EE-EEEEC--C-CSSCEEEEEECCGGGCSEEEEEET-----
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce----eE-eeeec--C-CCcceEEEEeCCCCCCCEEEEecC-----
Confidence 4456888876 88888777789998888776541 01 11111 1 1125788999985 334444443
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECC-------------CCcEEEEeCCCCeEEEEcCC-Cc-eEEEe
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-------------EGNAYVTDVTGSKIWKVGVK-GE-FLSII 186 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-------------dG~lyvtd~~~~~I~~v~~~-g~-~~~~~ 186 (332)
.+.+..||.++++......+.. .......+++.| +++.+++-+..+.|..++.. ++ .....
T Consensus 124 -d~~i~v~d~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 199 (379)
T 3jrp_A 124 -DGKVSVVEFKENGTTSPIIIDA---HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 199 (379)
T ss_dssp -TSEEEEEECCTTSCCCEEEEEC---CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred -CCcEEEEecCCCCceeeEEecC---CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeE
Confidence 4578899998774332223321 124567788888 68888877777877777653 22 11111
Q ss_pred cCCCCCCcccccCccccCeEEEccC---ceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeE
Q 020019 187 SSPLFTPKEWYKNLVGLNGIVYHPD---GFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKL 263 (332)
Q Consensus 187 ~~~~~~~p~~~~~~~~~nGi~~~~d---G~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l 263 (332)
. .+. ........++++|+ +.++++-...+.|..+++.++.. .....+............+++.++|++
T Consensus 200 ~--~~~-----~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~~s~~g~~ 270 (379)
T 3jrp_A 200 S--TLE-----GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG--PWKKTLLKEEKFPDVLWRASWSLSGNV 270 (379)
T ss_dssp E--EEC-----CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS--CCEEEESSSSCCSSCEEEEEECSSSCC
T ss_pred E--EEe-----cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCc--cceeeeeccccCCCcEEEEEEcCCCCE
Confidence 0 000 01124578999999 85555556677788888776521 012222111012234567889999886
Q ss_pred EEEe
Q 020019 264 VVAG 267 (332)
Q Consensus 264 ~va~ 267 (332)
+++.
T Consensus 271 l~~~ 274 (379)
T 3jrp_A 271 LALS 274 (379)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6653
No 238
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.07 E-value=3.3e-05 Score=74.93 Aligned_cols=112 Identities=16% Similarity=0.154 Sum_probs=73.7
Q ss_pred CCccceEECCC-CcEEEEeCC---------------------CCeEEEEcCCCc-----e---EEEe--cCCCCCC----
Q 020019 150 SCADDVTVDAE-GNAYVTDVT---------------------GSKIWKVGVKGE-----F---LSII--SSPLFTP---- 193 (332)
Q Consensus 150 ~~~ndiavd~d-G~lyvtd~~---------------------~~~I~~v~~~g~-----~---~~~~--~~~~~~~---- 193 (332)
.+|-|++++|. |.+|++-+. .|+|+++.+++. . ..++ .++....
T Consensus 384 dRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~ 463 (592)
T 4a9v_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred cCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccccc
Confidence 47899999994 899998542 388999986531 1 1111 1111000
Q ss_pred cc-----cccCccccCeEEEccCceEEE-EeCC-----------CCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEE
Q 020019 194 KE-----WYKNLVGLNGIVYHPDGFLIV-IHTF-----------SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLE 256 (332)
Q Consensus 194 p~-----~~~~~~~~nGi~~~~dG~Lyv-a~~~-----------~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~ 256 (332)
.. ....+..||+|+++++|.||+ +|.. ++.+|++++.++ .++.+... .....|.|++
T Consensus 464 ~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG-----el~~fl~~-P~~aEpnGia 537 (592)
T 4a9v_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG-----EIRRFMVG-PIGCEVTGIS 537 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTC-----CEEEEEEC-CTTCEEEEEE
T ss_pred cCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCC-----eEEEEEeC-CCCccccCCE
Confidence 00 012367899999999999999 6653 458999999877 44444321 1235789999
Q ss_pred EeCCCe-EEEEe
Q 020019 257 LLSPTK-LVVAG 267 (332)
Q Consensus 257 ~~~dG~-l~va~ 267 (332)
+.||++ |||+-
T Consensus 538 fSPD~ktLfV~v 549 (592)
T 4a9v_A 538 FSPDQKTLFVGI 549 (592)
T ss_dssp ECTTSSEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 999965 78774
No 239
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.05 E-value=0.005 Score=55.49 Aligned_cols=144 Identities=6% Similarity=0.017 Sum_probs=89.6
Q ss_pred ccceEEEeC--CCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEE
Q 020019 98 GSLGLVLDH--PRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWK 175 (332)
Q Consensus 98 ~~~gi~vd~--~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~ 175 (332)
....+.+++ + +.++++... .+.+..||.++++........ .....+.+++.|+|.++++-+..+.|..
T Consensus 127 ~v~~~~~~~~~~-~~~l~s~s~-----dg~i~~wd~~~~~~~~~~~~~----~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 127 EIIYMYGHNEVN-TEYFIWADN-----RGTIGFQSYEDDSQYIVHSAK----SDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp CEEEEECCC----CCEEEEEET-----TCCEEEEESSSSCEEEEECCC----SSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred CEEEEEcCCCCC-CCEEEEEeC-----CCcEEEEECCCCcEEEEEecC----CCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 467899988 7 665554432 356889999988875433221 1234788999999998888788888888
Q ss_pred EcCC-CceE-EEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEe-cCCCCCC
Q 020019 176 VGVK-GEFL-SIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRV-AGGPLSF 251 (332)
Q Consensus 176 v~~~-g~~~-~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~-~g~~~~~ 251 (332)
+|.. ++.. ..+... .....+.|+|+|+| .|..+. . +.|..+|+.+++. +..+.. .......
T Consensus 197 wd~~~~~~~~~~~~~~---------h~~~v~~l~fs~~g~~l~s~~-~-~~v~iwd~~~~~~----~~~~~~~~~~~~~~ 261 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVD---------EEAKIKEVKFADNGYWMVVEC-D-QTVVCFDLRKDVG----TLAYPTYTIPEFKT 261 (343)
T ss_dssp EESSCTTSCCEECCCC---------TTSCEEEEEECTTSSEEEEEE-S-SBEEEEETTSSTT----CBSSCCCBC-----
T ss_pred EECCCCCCCccEEecc---------CCCCEEEEEEeCCCCEEEEEe-C-CeEEEEEcCCCCc----ceeecccccccccc
Confidence 8875 3322 112110 12346799999999 666655 3 3888899886531 111111 0000110
Q ss_pred -CCeEEEeCCCeEEEE
Q 020019 252 -GDGLELLSPTKLVVA 266 (332)
Q Consensus 252 -pdGi~~~~dG~l~va 266 (332)
...++++++|+++++
T Consensus 262 ~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 262 GTVTYDIDDSGKNMIA 277 (343)
T ss_dssp CCEEEEECTTSSEEEE
T ss_pred cceEEEECCCCCEEEE
Confidence 035999999998887
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.05 E-value=0.0062 Score=60.97 Aligned_cols=204 Identities=13% Similarity=0.125 Sum_probs=107.0
Q ss_pred ceEEEeCCCCeEEEEEeCcC-----------C--CccceEEEEECCCCcEEEEEecCCCCC-CCCCccceE-EC--CCC-
Q 020019 100 LGLVLDHPRNRLLVVAADVF-----------G--NKYSAVAAYDLSTWNRLFLTQLSGPSD-GKSCADDVT-VD--AEG- 161 (332)
Q Consensus 100 ~gi~vd~~~g~l~v~~~~~~-----------~--~~~~~l~~~d~~~g~~~~~~~l~~~~~-~~~~~ndia-vd--~dG- 161 (332)
..+++|++.+.+|+...+.. . .-.+.|+.+|.++|+..+.++...... ....+...+ ++ .+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 36889998789998864310 0 001359999999999998887632100 001111222 22 145
Q ss_pred --cEEEEeCCCCeEEEEcCC-CceEEEecCCCCC---------Ccc-------------cccCc---cccCeEEEccCc-
Q 020019 162 --NAYVTDVTGSKIWKVGVK-GEFLSIISSPLFT---------PKE-------------WYKNL---VGLNGIVYHPDG- 212 (332)
Q Consensus 162 --~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~---------~p~-------------~~~~~---~~~nGi~~~~dG- 212 (332)
.+++.-...|.|+.+|.. |+.+.......-. .|. ..+.. ..-.+++++|++
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 455555567888888865 6654222100000 000 00011 112478999987
Q ss_pred eEEEEeCC------------------------------------------CCeEEEEeCCCCCCccceeEEEEecCCCCC
Q 020019 213 FLIVIHTF------------------------------------------SGNLFKIDIVDGVGEGEEIKLIRVAGGPLS 250 (332)
Q Consensus 213 ~Lyva~~~------------------------------------------~~~i~~id~~~~~~~~~~~~~v~~~g~~~~ 250 (332)
.+|+.... .+.|..+|+.+++ .+-.+... . .
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~----~~W~~~~~-~--~ 478 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK----AAWSVEHV-S--P 478 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE----EEEEEEES-S--S
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCc----EEeecCCC-C--C
Confidence 88886421 1678899998872 33333332 1 1
Q ss_pred CCCeEEEeCCCeEEEEeCC-ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-ECCeEEEEEecC
Q 020019 251 FGDGLELLSPTKLVVAGNP-SARLVESSDGWETAAVVAKFSGPVHRLATAATV-KDGRVYLNHMLG 314 (332)
Q Consensus 251 ~pdGi~~~~dG~l~va~~~-~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~~~g 314 (332)
.-.|.....++.+|++... ..+.+...+| +++..+..+....-+-+++ .+|+.||....|
T Consensus 479 ~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG----~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G 540 (677)
T 1kb0_A 479 WNGGTLTTAGNVVFQGTADGRLVAYHAATG----EKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVG 540 (677)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTC----CEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CcCcceEeCCCEEEEECCCCcEEEEECCCC----ceeeeeeCCCCcccCCEEEEeCCEEEEEEecc
Confidence 2234444456778887543 3344556677 3333333222112223455 788899854433
No 241
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.03 E-value=0.0051 Score=60.68 Aligned_cols=203 Identities=11% Similarity=0.009 Sum_probs=108.6
Q ss_pred eEEEeCCCCeEEEEEeCcCC---------C-ccceEEEEECCCCcEEEEEecCCCCC-CCCCccc-eEEC---CCC---c
Q 020019 101 GLVLDHPRNRLLVVAADVFG---------N-KYSAVAAYDLSTWNRLFLTQLSGPSD-GKSCADD-VTVD---AEG---N 162 (332)
Q Consensus 101 gi~vd~~~g~l~v~~~~~~~---------~-~~~~l~~~d~~~g~~~~~~~l~~~~~-~~~~~nd-iavd---~dG---~ 162 (332)
.+++|+++|.+|+...+... + -...|+.+|+++|+..+.++...... ....++. +.+| .+| .
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~ 324 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARK 324 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEE
Confidence 47888888999998653100 0 02469999999999998887632100 0011111 3333 456 4
Q ss_pred EEEEeCCCCeEEEEcCC-CceEEEecCCC-----------CCCccc---------------cc---CccccCeEEEccCc
Q 020019 163 AYVTDVTGSKIWKVGVK-GEFLSIISSPL-----------FTPKEW---------------YK---NLVGLNGIVYHPDG 212 (332)
Q Consensus 163 lyvtd~~~~~I~~v~~~-g~~~~~~~~~~-----------~~~p~~---------------~~---~~~~~nGi~~~~dG 212 (332)
+++.-..+|.+|.+|.. |+.+.-..... -..|.. .| +...-.+++++|+.
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 404 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKR 404 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCC
Confidence 56655667888888864 66442211000 000000 00 11223678899886
Q ss_pred -eEEEEeC--------------------------------------CCCeEEEEeCCCCCCccceeEEEEecCCCCCCCC
Q 020019 213 -FLIVIHT--------------------------------------FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGD 253 (332)
Q Consensus 213 -~Lyva~~--------------------------------------~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pd 253 (332)
.+|+... ..+.|+.+|+.+++ .+=..+.. .+.-.
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~----~~W~~~~~---~~~~~ 477 (599)
T 1w6s_A 405 ELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGD----YKWEKMER---FAVWG 477 (599)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCC----EEEEEEES---SCCCS
T ss_pred CEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCC----EEeEecCC---CCccC
Confidence 7776421 23578888888772 22223222 12223
Q ss_pred eEEEeCCCeEEEEeCC-ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-ECCeEEEEEecC
Q 020019 254 GLELLSPTKLVVAGNP-SARLVESSDGWETAAVVAKFSGPVHRLATAATV-KDGRVYLNHMLG 314 (332)
Q Consensus 254 Gi~~~~dG~l~va~~~-~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~~~g 314 (332)
|.....+|.+|++... ..+.+...+|...-+ ..+.......| +++ .+|++||....|
T Consensus 478 g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~--~~l~~g~~~~P--~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 478 GTMATAGDLVFYGTLDGYLKARDSDTGDLLWK--FKIPSGAIGYP--MTYTHKGTQYVAIYYG 536 (599)
T ss_dssp BCEEETTTEEEEECTTSEEEEEETTTCCEEEE--EECSSCCCSCC--EEEEETTEEEEEEEEC
T ss_pred cceEecCCEEEEECCCCeEEEEECCCCCEEEE--eeCCCCcEecc--EEEEeCCEEEEEEEcc
Confidence 5344567889987644 345456677722211 12222223334 444 799999965555
No 242
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.03 E-value=0.0064 Score=53.89 Aligned_cols=196 Identities=12% Similarity=0.067 Sum_probs=116.8
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++++|+.+++...++.|..++...... . ...... ......+...++ +..+++... .+.
T Consensus 88 ~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~-----~--~~~~~~---~~~~~~~~~~~~-~~~l~s~s~-----d~~ 151 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT-----T--RRFVGH---TKDVLSVAFSSD-NRQIVSGSR-----DKT 151 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-----E--EEEECC---SSCEEEEEECTT-SSCEEEEET-----TSC
T ss_pred CEEEEEECCCCCEEEEEcccccceEEeecccce-----e--eeecCC---CCceeEEEEeec-CccceeecC-----CCe
Confidence 456789999999888877789999998765431 1 111111 123456667775 444443321 346
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCC--cEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccc
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEG--NAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG--~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
+..||....... .....+ .......+++.+++ .++++....+.|..++.. ++....+... ...
T Consensus 152 ~~~~d~~~~~~~-~~~~~~---~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h----------~~~ 217 (340)
T 4aow_A 152 IKLWNTLGVCKY-TVQDES---HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGH----------TGY 217 (340)
T ss_dssp EEEECTTSCEEE-EECSSS---CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCC----------SSC
T ss_pred EEEEEeCCCceE-EEEecc---ccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCC----------CCc
Confidence 788998754432 223321 12445667777664 467777777888888876 3433322111 123
Q ss_pred cCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC-ceEEEEcCCC
Q 020019 203 LNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP-SARLVESSDG 279 (332)
Q Consensus 203 ~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~-~~~~v~~~dg 279 (332)
.+.|+++|+|.++++-...+.|..+|+.+. ..+..+... .....+++.+++.++++... ..++.....+
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~----~~~~~~~~~----~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNEG----KHLYTLDGG----DIINALCFSPNRYWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTT----EEEEEEECS----SCEEEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEeccC----ceeeeecCC----ceEEeeecCCCCceeeccCCCEEEEEECCCC
Confidence 578999999966666667788988998866 234434322 23456778888877776543 3333333433
No 243
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.02 E-value=0.00056 Score=71.82 Aligned_cols=207 Identities=14% Similarity=0.057 Sum_probs=114.5
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCe-EEEEEeCc--C--
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR-LLVVAADV--F-- 119 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~-l~v~~~~~--~-- 119 (332)
..+..++++|+|+.++.....+.|+.++..+++. . .+..... .....++++|+ |+ |.++..+. .
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~-----~--~~~~~~~---~~v~~~~~SpD-G~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP-----T--VIERSRE---AMITDFTISDN-SRFIAYGFPLKHGETD 447 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-----E--EEEECSS---SCCCCEEECTT-SCEEEEEEEECSSTTC
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCce-----E--EeccCCC---CCccceEECCC-CCeEEEEecCcccccc
Confidence 3567899999999887666678999999987762 1 2321111 13478999997 66 43333221 0
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCC-eEEE-------EcCCCceEEE-ecCC
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGS-KIWK-------VGVKGEFLSI-ISSP 189 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~-~I~~-------v~~~g~~~~~-~~~~ 189 (332)
......|++||.++++. ..+.. .......+++.|||+ ||+...... .++. +..+.+...+ +...
T Consensus 448 ~~~~~~i~l~d~~~g~~---~~l~~---~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRKI---FAATT---ENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPG 521 (1045)
T ss_dssp SCCEEEEEEEETTTTEE---EECSC---SSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTT
T ss_pred CCCCCeEEEEECCCCcE---EEeeC---CCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCC
Confidence 01235799999988763 23321 123456689999996 666544221 1111 0111111100 0000
Q ss_pred ---C----------------CCC--cc--ccc-CccccCeEEEccCceEEEE-------------eCCCCeEEEEeCCCC
Q 020019 190 ---L----------------FTP--KE--WYK-NLVGLNGIVYHPDGFLIVI-------------HTFSGNLFKIDIVDG 232 (332)
Q Consensus 190 ---~----------------~~~--p~--~~~-~~~~~nGi~~~~dG~Lyva-------------~~~~~~i~~id~~~~ 232 (332)
. +.. .. ..+ ......++++++||.+|+. .....+|+++|+.++
T Consensus 522 ~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~ 601 (1045)
T 1k32_A 522 SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTR 601 (1045)
T ss_dssp CCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTC
T ss_pred CCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCC
Confidence 0 000 00 000 1123568999999965553 223558999999877
Q ss_pred CCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeCCceEEEEcCCC
Q 020019 233 VGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGNPSARLVESSDG 279 (332)
Q Consensus 233 ~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~~~~~~v~~~dg 279 (332)
+ .+.+. ..+..+++++||+ |+++.....+++....+
T Consensus 602 ~-----~~~l~------~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~ 638 (1045)
T 1k32_A 602 K-----VTEVK------NNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 638 (1045)
T ss_dssp C-----EEEEE------EEEEEEEECTTSCEEEEEETTSCEEEEESSC
T ss_pred c-----EEEee------cCcceEEECCCCCEEEEEcCCcEEEEeCccC
Confidence 2 33232 1245789999987 45555455555555555
No 244
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.02 E-value=0.0021 Score=59.65 Aligned_cols=211 Identities=9% Similarity=0.100 Sum_probs=120.4
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCc----ccee-eeEEeccc-Cc---C----CCccceEEEeCCC--Ce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPG----TVLE-EVTLVKDL-EL---T----GNGSLGLVLDHPR--NR 110 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~----~~~~-~~~~~~~~-~~---~----~~~~~gi~vd~~~--g~ 110 (332)
....++++++|+++++...+|.|..++..+++... ...+ ...+.... ++ . ......+++.++. ..
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~ 109 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQ 109 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcce
Confidence 44578999999988887778999888876543100 0000 00121111 00 0 0246789999973 24
Q ss_pred EEEEEeCcCCCccceEEEEECCCCcEEEE-------------------------------------EecCCCCCCCCCcc
Q 020019 111 LLVVAADVFGNKYSAVAAYDLSTWNRLFL-------------------------------------TQLSGPSDGKSCAD 153 (332)
Q Consensus 111 l~v~~~~~~~~~~~~l~~~d~~~g~~~~~-------------------------------------~~l~~~~~~~~~~n 153 (332)
+..+.. .+.|..||.++++.... ..+. ........
T Consensus 110 l~s~s~------d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~ 181 (447)
T 3dw8_B 110 FLLSTN------DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA--NAHTYHIN 181 (447)
T ss_dssp EEEEEC------SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC--SCCSSCCC
T ss_pred EEEeCC------CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec--cCCCcceE
Confidence 444443 34677888765433110 0110 11134577
Q ss_pred ceEECCCCcEEEEeCCCCeEEEEcCC--CceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCC
Q 020019 154 DVTVDAEGNAYVTDVTGSKIWKVGVK--GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIV 230 (332)
Q Consensus 154 diavd~dG~lyvtd~~~~~I~~v~~~--g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~ 230 (332)
.+++.++|+++++- ..+.|..++.. ++....+...... ........+.++|+|+| .++++-...+.|..+|+.
T Consensus 182 ~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 182 SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPAN---MEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp EEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSS---GGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeeccccc---ccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 89999999988776 68889888877 2333222111000 00122346899999998 777777788899999988
Q ss_pred CCCCccceeEEEEecCCC---------CCCCCeEEEeCCCeEEEEeC
Q 020019 231 DGVGEGEEIKLIRVAGGP---------LSFGDGLELLSPTKLVVAGN 268 (332)
Q Consensus 231 ~~~~~~~~~~~v~~~g~~---------~~~pdGi~~~~dG~l~va~~ 268 (332)
+++........+...... ......+++.++|+++++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 304 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD 304 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee
Confidence 763211113434322000 01456899999998877753
No 245
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.98 E-value=0.0054 Score=53.62 Aligned_cols=199 Identities=9% Similarity=0.001 Sum_probs=115.5
Q ss_pred EecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 40 YHSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 40 ~~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
+.+.......+++ ++++.+++...+|.|..++..+++. .. .+... ......++++++ ++++++...
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~----~~--~~~~~----~~~v~~~~~~~~-~~~l~~~~~-- 79 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWL----GT--VVYTG----QGFLNSVCYDSE-KELLLFGGK-- 79 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEE----EE--EEEEC----SSCEEEEEEETT-TTEEEEEET--
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEE----EE--EeecC----CccEEEEEECCC-CCEEEEecC--
Confidence 4444445677888 8888888777789999999865541 11 22211 125788999997 554444332
Q ss_pred CCccceEEEEECCCCcE-EEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCccccc
Q 020019 120 GNKYSAVAAYDLSTWNR-LFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~-~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~ 198 (332)
.+.+..|+...... .....+.. .......+.+ +++.+++-...+.|..++ .++....+...
T Consensus 80 ---dg~i~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~--------- 141 (313)
T 3odt_A 80 ---DTMINGVPLFATSGEDPLYTLIG---HQGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNLQAH--------- 141 (313)
T ss_dssp ---TSCEEEEETTCCTTSCC-CEECC---CSSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEEECC---------
T ss_pred ---CCeEEEEEeeecCCCCcccchhh---cccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEecccC---------
Confidence 35677888765321 11112211 1234566777 456777777788888888 43433322211
Q ss_pred CccccCeEEEcc-CceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCc-eEEEEc
Q 020019 199 NLVGLNGIVYHP-DGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPS-ARLVES 276 (332)
Q Consensus 199 ~~~~~nGi~~~~-dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~-~~~v~~ 276 (332)
......+++.+ ++.++++-...+.|..++... ....+... .......+++.+++.++++.... .++...
T Consensus 142 -~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~ 212 (313)
T 3odt_A 142 -NASVWDAKVVSFSENKFLTASADKTIKLWQNDK------VIKTFSGI--HNDVVRHLAVVDDGHFISCSNDGLIKLVDM 212 (313)
T ss_dssp -SSCEEEEEEEETTTTEEEEEETTSCEEEEETTE------EEEEECSS--CSSCEEEEEEEETTEEEEEETTSEEEEEET
T ss_pred -CCceeEEEEccCCCCEEEEEECCCCEEEEecCc------eEEEEecc--CcccEEEEEEcCCCeEEEccCCCeEEEEEC
Confidence 12345778877 774444555677888887331 33333321 22456788899999866665443 344455
Q ss_pred CCC
Q 020019 277 SDG 279 (332)
Q Consensus 277 ~dg 279 (332)
..+
T Consensus 213 ~~~ 215 (313)
T 3odt_A 213 HTG 215 (313)
T ss_dssp TTC
T ss_pred Cch
Confidence 555
No 246
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.96 E-value=0.008 Score=52.88 Aligned_cols=199 Identities=13% Similarity=0.071 Sum_probs=114.0
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceee-eEEecccCcCCCccceEEEeCC-CCeEEEEEeCcCCCcc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEE-VTLVKDLELTGNGSLGLVLDHP-RNRLLVVAADVFGNKY 123 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gi~vd~~-~g~l~v~~~~~~~~~~ 123 (332)
....++++++++.+++...+|.|..++..++... .+. ..+... ......+++.+. ++.++++... .
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~----~~~v~~~~~~~~~d~~~l~s~~~-----d 80 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN---WELSDSWRAH----DSSIVAIDWASPEYGRIIASASY-----D 80 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC---EEEEEEEECC----SSCEEEEEECCGGGCSEEEEEET-----T
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc---ceecceeccC----CCcEEEEEEcCCCCCCEEEEEcC-----C
Confidence 4567999999998887777899988887754321 010 011111 125688999873 1554444332 3
Q ss_pred ceEEEEECCCCcE-------EEEEecCCCCCCCCCccceEECCC--CcEEEEeCCCCeEEEEcCC-CceEEE------ec
Q 020019 124 SAVAAYDLSTWNR-------LFLTQLSGPSDGKSCADDVTVDAE--GNAYVTDVTGSKIWKVGVK-GEFLSI------IS 187 (332)
Q Consensus 124 ~~l~~~d~~~g~~-------~~~~~l~~~~~~~~~~ndiavd~d--G~lyvtd~~~~~I~~v~~~-g~~~~~------~~ 187 (332)
+.|..||.++++. .....+.. .......+++.++ ++++++-...+.|..+|.. ++.... ..
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLND---SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK 157 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECC---CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE
T ss_pred CeEEEEecCCCcccccccCcceeeeecc---cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc
Confidence 5688999987632 22223321 1356788999999 8888887788888888854 321100 00
Q ss_pred CCCCCCcccccCccccCeEEEccC---ceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCC---
Q 020019 188 SPLFTPKEWYKNLVGLNGIVYHPD---GFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPT--- 261 (332)
Q Consensus 188 ~~~~~~p~~~~~~~~~nGi~~~~d---G~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG--- 261 (332)
...+. + .........++++|+ +.++++-...+.+...+...+. ........+ .......+++.++|
T Consensus 158 ~~~~~-~--~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~-h~~~i~~~~~~p~~~~~ 229 (351)
T 3f3f_A 158 VLSIP-P--ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK----LHVAAKLPG-HKSLIRSISWAPSIGRW 229 (351)
T ss_dssp SCSCC-C--SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC----EEEEEECCC-CCSCEEEEEECCCSSCS
T ss_pred ccccc-c--CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc----eeeeeecCC-CCcceeEEEECCCCCCc
Confidence 00000 0 012345678999997 6444444455556444444441 212222331 22455688888887
Q ss_pred -eEEEEe
Q 020019 262 -KLVVAG 267 (332)
Q Consensus 262 -~l~va~ 267 (332)
+++++.
T Consensus 230 ~~~l~s~ 236 (351)
T 3f3f_A 230 YQLIATG 236 (351)
T ss_dssp SEEEEEE
T ss_pred ceEEEEE
Confidence 666664
No 247
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.96 E-value=0.0091 Score=53.33 Aligned_cols=166 Identities=8% Similarity=-0.018 Sum_probs=101.3
Q ss_pred ccccceEEcCC----CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCC---CeEEEEEeC
Q 020019 45 FFRECAKWDDS----GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPR---NRLLVVAAD 117 (332)
Q Consensus 45 ~~pegia~d~~----g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~---g~l~v~~~~ 117 (332)
....+++++|+ ...+++...++.|..++..+++. .........+. .......+++.++. ++++++...
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~----~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGE----IRLLQSYVDAD-ADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGC----EEEEEEEECSC-TTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcE----EEeeeeccccC-CCCcEEEEEeccCCCCCCCEEEEecC
Confidence 35568899973 34555665567898888775542 12111111111 11356788888852 344444332
Q ss_pred cCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcc
Q 020019 118 VFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKE 195 (332)
Q Consensus 118 ~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~ 195 (332)
.+.|.+||.++++......- .......+++.| +++++++-+..+.|..++.. ++....+.. +.
T Consensus 94 -----dg~i~v~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~--- 158 (366)
T 3k26_A 94 -----RGIIRIINPITMQCIKHYVG-----HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG--VE--- 158 (366)
T ss_dssp -----TCEEEEECTTTCCEEEEEES-----CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS--TT---
T ss_pred -----CCEEEEEEchhceEeeeecC-----CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc--cc---
Confidence 45789999998887655432 135678899999 78888888888888888876 444433311 00
Q ss_pred cccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCC
Q 020019 196 WYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 196 ~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
........++++++|..+++-...+.|..+++.++
T Consensus 159 --~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 159 --GHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp --SCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSH
T ss_pred --cccCceeEEEECCCCCEEEEecCCCCEEEEECCCC
Confidence 01234578888888844444445677877777643
No 248
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.95 E-value=0.0026 Score=59.15 Aligned_cols=206 Identities=12% Similarity=0.044 Sum_probs=118.8
Q ss_pred ccccceEEcC-CCCEEEEEecCCeEEEEECCC---CCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCC
Q 020019 45 FFRECAKWDD-SGRRFIVSFLDGGIGQVAVPD---DYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG 120 (332)
Q Consensus 45 ~~pegia~d~-~g~~~~~~~~~g~I~~vd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~ 120 (332)
.....+++++ +++++++...++.|..++..+ +.. .+........ ..+..+++.++ +.++++...
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~----~~~~~~~~h~----~~v~~~~~~~~-~~~l~s~s~--- 131 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEV----YSSSLTYDCS----STVTQITMIPN-FDAFAVSSK--- 131 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCC----CSCSEEEECS----SCEEEEEECTT-SSEEEEEET---
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcc----cceeeeccCC----CCEEEEEEeCC-CCEEEEEeC---
Confidence 3567899999 999888888889999998765 321 0100111111 25789999996 554444331
Q ss_pred CccceEEEEECC---CCcEEEE--------EecCCCCCCCCCccceE--ECCCCcEEEEeCCCCeEEEEcCC-CceEEEe
Q 020019 121 NKYSAVAAYDLS---TWNRLFL--------TQLSGPSDGKSCADDVT--VDAEGNAYVTDVTGSKIWKVGVK-GEFLSII 186 (332)
Q Consensus 121 ~~~~~l~~~d~~---~g~~~~~--------~~l~~~~~~~~~~ndia--vd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~ 186 (332)
.+.+.+||.+ +++.... +.+. +.........+. ..++++++++-+..+.|..+|.. ++....+
T Consensus 132 --dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 132 --DGQIIVLKVNHYQQESEVKFLNCECIRKINLK-NFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp --TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGG-GGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred --CCEEEEEEeccccCCceeeccccceeEEEEcc-CcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 3568888874 4443322 1221 000123344444 55788888888888999999975 4444333
Q ss_pred cCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEe----CCCe
Q 020019 187 SSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELL----SPTK 262 (332)
Q Consensus 187 ~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~----~dG~ 262 (332)
.... .....+.++++|++.+.++-...+.|..+|+..+ ..+..+... .......+++. ++|+
T Consensus 209 ~~~~--------h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~--~~~~v~~~~~~~~~s~~~~ 274 (437)
T 3gre_A 209 ENSP--------RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN----VLIRSWSFG--DHAPITHVEVCQFYGKNSV 274 (437)
T ss_dssp ECCG--------GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT----EEEEEEBCT--TCEEEEEEEECTTTCTTEE
T ss_pred ccCC--------CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc----cEEEEEecC--CCCceEEEEeccccCCCcc
Confidence 2210 1234679999999955555566788999998876 234444332 11223455333 5676
Q ss_pred EEEEeCCc--eEEEEcCCC
Q 020019 263 LVVAGNPS--ARLVESSDG 279 (332)
Q Consensus 263 l~va~~~~--~~~v~~~dg 279 (332)
++++.... .++.....+
T Consensus 275 ~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 275 IVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp EEEEESTTEEEEEEETTTT
T ss_pred EEEEEcCCCcEEEEEcCCC
Confidence 66665332 333344555
No 249
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.94 E-value=0.0018 Score=58.67 Aligned_cols=147 Identities=9% Similarity=0.092 Sum_probs=89.7
Q ss_pred ccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEc
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVG 177 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~ 177 (332)
....++++|+ |+++++... .+.|.+||.++++......+. .......+.+++.|+|+.+++-+..+.|...+
T Consensus 18 ~v~~l~~sp~-g~~las~~~-----D~~i~iw~~~~~~~~~~~~~~--~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~ 89 (345)
T 3fm0_A 18 RCWFLAWNPA-GTLLASCGG-----DRRIRIWGTEGDSWICKSVLS--EGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89 (345)
T ss_dssp CEEEEEECTT-SSCEEEEET-----TSCEEEEEEETTEEEEEEEEC--SSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cEEEEEECCC-CCEEEEEcC-----CCeEEEEEcCCCcceeeeeec--cccCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence 4578999997 775555432 356888998877644333321 11134577899999999888877777665555
Q ss_pred CCC-c--eEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEE-ecCCCCCCCC
Q 020019 178 VKG-E--FLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIR-VAGGPLSFGD 253 (332)
Q Consensus 178 ~~g-~--~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~-~~g~~~~~pd 253 (332)
.+. + ....+.. .....+.++|+|+|.++++-...+.|..+++..+. ....+. .. .......
T Consensus 90 ~~~~~~~~~~~~~~----------h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~----~~~~~~~~~-~h~~~v~ 154 (345)
T 3fm0_A 90 KNQDDFECVTTLEG----------HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED----EYECVSVLN-SHTQDVK 154 (345)
T ss_dssp ECCC-EEEEEEECC----------CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS----CEEEEEEEC-CCCSCEE
T ss_pred ccCCCeEEEEEccC----------CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC----CeEEEEEec-CcCCCeE
Confidence 432 2 1221211 11235789999999655566667778777776542 222222 22 1223456
Q ss_pred eEEEeCCCeEEEEe
Q 020019 254 GLELLSPTKLVVAG 267 (332)
Q Consensus 254 Gi~~~~dG~l~va~ 267 (332)
.+++.++|+++++.
T Consensus 155 ~~~~~p~~~~l~s~ 168 (345)
T 3fm0_A 155 HVVWHPSQELLASA 168 (345)
T ss_dssp EEEECSSSSCEEEE
T ss_pred EEEECCCCCEEEEE
Confidence 78899998877764
No 250
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.94 E-value=0.0085 Score=60.07 Aligned_cols=200 Identities=16% Similarity=0.163 Sum_probs=104.4
Q ss_pred eEEEeCCCCeEEEEEeCcCC------------C-ccceEEEEECCCCcEEEEEecCCCCC--CCCCc-----cceEECCC
Q 020019 101 GLVLDHPRNRLLVVAADVFG------------N-KYSAVAAYDLSTWNRLFLTQLSGPSD--GKSCA-----DDVTVDAE 160 (332)
Q Consensus 101 gi~vd~~~g~l~v~~~~~~~------------~-~~~~l~~~d~~~g~~~~~~~l~~~~~--~~~~~-----ndiavd~d 160 (332)
.+++|++++.+|+...+... + =.+.|+.+|.++|+..+..+... .+ ....+ .++.+ +
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~-~d~wd~~~~~~~~l~d~~~--~ 315 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTP-GDAWDYTATQHMILAELPI--D 315 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESST-TCCSCCCCCSCEEEEEEEE--T
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCC-cccccccCCCCcEEEeecc--C
Confidence 57899887899988653110 0 01258999999999988777531 11 00111 12222 3
Q ss_pred Cc---EEEEeCCCCeEEEEcCC-CceEEEecCCC----------CCCcc----------------ccc---CccccCeEE
Q 020019 161 GN---AYVTDVTGSKIWKVGVK-GEFLSIISSPL----------FTPKE----------------WYK---NLVGLNGIV 207 (332)
Q Consensus 161 G~---lyvtd~~~~~I~~v~~~-g~~~~~~~~~~----------~~~p~----------------~~~---~~~~~nGi~ 207 (332)
|. +++.-..+|.++.+|.. |+.+....... ...|. ..+ +...-.+++
T Consensus 316 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a 395 (689)
T 1yiq_A 316 GKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMS 395 (689)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCE
T ss_pred CcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcce
Confidence 32 44444456777777754 55432110000 00000 000 111234689
Q ss_pred EccCc-eEEEEeCC--------------------------------------------CCeEEEEeCCCCCCccceeEEE
Q 020019 208 YHPDG-FLIVIHTF--------------------------------------------SGNLFKIDIVDGVGEGEEIKLI 242 (332)
Q Consensus 208 ~~~dG-~Lyva~~~--------------------------------------------~~~i~~id~~~~~~~~~~~~~v 242 (332)
+||+. .+|+.... .+.|..+|+.+++ .+-.+
T Consensus 396 ~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~----~~W~~ 471 (689)
T 1yiq_A 396 YNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ----AAWEV 471 (689)
T ss_dssp EETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE----EEEEE
T ss_pred ECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCC----eEeEc
Confidence 99986 88886321 2668889998882 33333
Q ss_pred EecCCCCCCCCeEEEeCCCeEEEEeCC-ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-ECCeEEEEEecC
Q 020019 243 RVAGGPLSFGDGLELLSPTKLVVAGNP-SARLVESSDGWETAAVVAKFSGPVHRLATAATV-KDGRVYLNHMLG 314 (332)
Q Consensus 243 ~~~g~~~~~pdGi~~~~dG~l~va~~~-~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~~~g 314 (332)
+.. .....|.....+|.+|++... ..+.+...+| +++-.+..+.....+-+++ .+|+.||....|
T Consensus 472 ~~~---~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG----~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 472 PYV---TIFNGGTLSTAGNLVFEGSADGRVIAYAADTG----EKLWEQPAASGVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp EES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTC----CEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred cCC---CCccCccceECCCEEEEECCCCcEEEEECCCC----ccceeeeCCCCcccCceEEEECCEEEEEEEec
Confidence 332 122234555567888887643 3454566677 3332222221111223555 899999865544
No 251
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.92 E-value=0.00046 Score=63.03 Aligned_cols=184 Identities=10% Similarity=0.113 Sum_probs=101.5
Q ss_pred cccceEEcCCCCEEEEE-ec--CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCc
Q 020019 46 FRECAKWDDSGRRFIVS-FL--DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~-~~--~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~ 122 (332)
++..++++|+|+.++.. .. ...|+.++..+++. . .+..... ....++.+.++...|+++..
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~-----~--~l~~~~~---~~~~~~~~spdg~~l~~~~~------ 100 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA-----V--QLTEGKG---DNTFGGFISTDERAFFYVKN------ 100 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE-----E--ECCCSSC---BCTTTCEECTTSSEEEEEET------
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE-----E--EeecCCC---CccccceECCCCCEEEEEEc------
Confidence 36788999999865443 32 34799999876641 1 2221111 12234678887344555543
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccc------------------eEECCCCc-EEEEe----CCCCeEEEEcCC
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADD------------------VTVDAEGN-AYVTD----VTGSKIWKVGVK 179 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~nd------------------iavd~dG~-lyvtd----~~~~~I~~v~~~ 179 (332)
...|+++|+++++.......+ . ...+.+ +.+.|+|+ +++.. .....|+.++.+
T Consensus 101 ~~~l~~~d~~~~~~~~~~~~~--~--~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~ 176 (396)
T 3c5m_A 101 ELNLMKVDLETLEEQVIYTVD--E--EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIE 176 (396)
T ss_dssp TTEEEEEETTTCCEEEEEECC--T--TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETT
T ss_pred CCcEEEEECCCCCcEEEEecc--c--ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECC
Confidence 236899999988766555432 1 111111 23455654 33333 345678888876
Q ss_pred -CceEEEecCCCCCCcccccCccccCeEEEcc-Cc-eEEEEeCCC-----CeEEEEeCCCCCCccceeEEEEecCCCCCC
Q 020019 180 -GEFLSIISSPLFTPKEWYKNLVGLNGIVYHP-DG-FLIVIHTFS-----GNLFKIDIVDGVGEGEEIKLIRVAGGPLSF 251 (332)
Q Consensus 180 -g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~-dG-~Lyva~~~~-----~~i~~id~~~~~~~~~~~~~v~~~g~~~~~ 251 (332)
|+...+... ......++++| || .|++..... .+|+.++++++ ..+.+... .....
T Consensus 177 ~g~~~~~~~~-----------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-----~~~~l~~~-~~~~~ 239 (396)
T 3c5m_A 177 TGELEVIHQD-----------TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-----NVRKIKEH-AEGES 239 (396)
T ss_dssp TCCEEEEEEE-----------SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-----CCEESSCC-CTTEE
T ss_pred CCcEEeeccC-----------CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-----ceeEeecc-CCCcc
Confidence 444333211 12345789999 77 565554332 47999998765 22222111 11113
Q ss_pred CCeEEEeCCCe-EEEE
Q 020019 252 GDGLELLSPTK-LVVA 266 (332)
Q Consensus 252 pdGi~~~~dG~-l~va 266 (332)
+..+++.+||+ |+++
T Consensus 240 ~~~~~~spdg~~l~~~ 255 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYV 255 (396)
T ss_dssp EEEEEECTTSSCEEEE
T ss_pred ccceEECCCCCEEEEE
Confidence 44578889987 5554
No 252
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.92 E-value=0.011 Score=55.22 Aligned_cols=200 Identities=12% Similarity=0.024 Sum_probs=112.3
Q ss_pred ceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEE
Q 020019 49 CAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAA 128 (332)
Q Consensus 49 gia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~ 128 (332)
.+.+ +++.+++...+|.|..++..+++. .. .+.... ..+..+++.++ +.++.+.. .+.+..
T Consensus 127 ~~~~--~~~~l~sgs~dg~i~vwd~~~~~~----~~--~~~~h~----~~V~~l~~~~~-~~l~s~s~------dg~i~v 187 (464)
T 3v7d_B 127 CLQF--EDNYVITGADDKMIRVYDSINKKF----LL--QLSGHD----GGVWALKYAHG-GILVSGST------DRTVRV 187 (464)
T ss_dssp EEEE--ETTEEEEEETTSCEEEEETTTTEE----EE--EECCCS----SCEEEEEECST-TEEEEEET------TSCEEE
T ss_pred EEEE--CCCEEEEEcCCCcEEEEECCCCcE----EE--EEeCCC----cCEEEEEEcCC-CEEEEEeC------CCCEEE
Confidence 3444 456777777789999999876652 11 222111 25788999885 65555543 356899
Q ss_pred EECCCCcEEEEEecCCCCCCCCCccceEEC--CCCcEEEEeCCCCeEEEEcCCCce-EEEecC-CCC----CCccc----
Q 020019 129 YDLSTWNRLFLTQLSGPSDGKSCADDVTVD--AEGNAYVTDVTGSKIWKVGVKGEF-LSIISS-PLF----TPKEW---- 196 (332)
Q Consensus 129 ~d~~~g~~~~~~~l~~~~~~~~~~ndiavd--~dG~lyvtd~~~~~I~~v~~~g~~-~~~~~~-~~~----~~p~~---- 196 (332)
||.++++......- . ......+++. ++++.+++-+..+.|..++..... ...... ... ..|..
T Consensus 188 wd~~~~~~~~~~~~--h---~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 188 WDIKKGCCTHVFEG--H---NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp EETTTTEEEEEECC--C---SSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred EECCCCcEEEEECC--C---CCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 99998876544331 1 2345556666 567777877778888777765321 110000 000 00000
Q ss_pred --ccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe-C-CceE
Q 020019 197 --YKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG-N-PSAR 272 (332)
Q Consensus 197 --~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~-~-~~~~ 272 (332)
....-...-.++++++.+.++-...+.|..+|+.++ +.+..+.. .......++++++|+.+++. . ...+
T Consensus 263 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~----~~~~~~~~---~~~~v~~~~~~~~~~~l~sg~~dg~i~ 335 (464)
T 3v7d_B 263 VGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM----KCLYILSG---HTDRIYSTIYDHERKRCISASMDTTIR 335 (464)
T ss_dssp EEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT----EEEEEECC---CSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred EEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCC----cEEEEecC---CCCCEEEEEEcCCCCEEEEEeCCCcEE
Confidence 000001122345677844444556778999998876 23333321 23456688999998776665 3 3344
Q ss_pred EEEcCCC
Q 020019 273 LVESSDG 279 (332)
Q Consensus 273 ~v~~~dg 279 (332)
+.....+
T Consensus 336 vwd~~~~ 342 (464)
T 3v7d_B 336 IWDLENG 342 (464)
T ss_dssp EEETTTT
T ss_pred EEECCCC
Confidence 4455556
No 253
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.91 E-value=0.0011 Score=59.14 Aligned_cols=190 Identities=8% Similarity=-0.040 Sum_probs=116.1
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCe--EEEEEeCcCCCcc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR--LLVVAADVFGNKY 123 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~--l~v~~~~~~~~~~ 123 (332)
...+++++++++.+++...++.|..++..+++.. ......... ......+++.++ ++ |+++.. .
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~---~~~~~~~~~----~~~v~~~~~~~~-~~~~l~~~~~------d 78 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN---VDLLQSLRY----KHPLLCCNFIDN-TDLQIYVGTV------Q 78 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE---EEEEEEEEC----SSCEEEEEEEES-SSEEEEEEET------T
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc---ccceeeeec----CCceEEEEECCC-CCcEEEEEcC------C
Confidence 4567899999998887777898888887655410 000112211 125788999987 66 444443 3
Q ss_pred ceEEEEEC-CCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCC---ceEEEecC--CCCCCcccc
Q 020019 124 SAVAAYDL-STWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG---EFLSIISS--PLFTPKEWY 197 (332)
Q Consensus 124 ~~l~~~d~-~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g---~~~~~~~~--~~~~~p~~~ 197 (332)
+.|..||. ++++.. .+.+. ........+++.+ ++.+++-+..+.|..++... ........ ..+.
T Consensus 79 g~i~~wd~~~~~~~~---~~~~~-~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----- 148 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQ---ALTNN-EANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK----- 148 (342)
T ss_dssp SCEEEECSSSSSSEE---ECBSC-CCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-----
T ss_pred CeEEEEEeccCCceE---ecccc-CCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-----
Confidence 57899999 887663 23210 0134567899999 88888888888888888542 00000000 0111
Q ss_pred cCccccCeEEEccCceEEEEeCCCCeEEEEeCCC-CCCccceeEEEEecCCCCCCCCeEEEeC-CCeEEEEe
Q 020019 198 KNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVD-GVGEGEEIKLIRVAGGPLSFGDGLELLS-PTKLVVAG 267 (332)
Q Consensus 198 ~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~-~~~~~~~~~~v~~~g~~~~~pdGi~~~~-dG~l~va~ 267 (332)
.......+++++++ ++++ ...+.|..+++.+ +.. ........ .......+++.+ +|+++++.
T Consensus 149 -~~~~v~~~~~~~~~-l~~~-~~d~~i~i~d~~~~~~~---~~~~~~~~--~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR-LIVG-MNNSQVQWFRLPLCEDD---NGTIEESG--LKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp -SCCCEEEEEECSSE-EEEE-ESTTEEEEEESSCCTTC---CCEEEECS--CSSCEEEEEECSGGGCEEEEE
T ss_pred -eCCceEEEEecCCc-EEEE-eCCCeEEEEECCccccc---cceeeecC--CCCceeEEEECCCCCCEEEEE
Confidence 12346789999888 5555 4567899999887 421 22222221 223567889999 88877775
No 254
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.91 E-value=0.0034 Score=56.57 Aligned_cols=195 Identities=13% Similarity=0.059 Sum_probs=118.1
Q ss_pred CCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecc-cCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECC
Q 020019 54 DSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKD-LELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLS 132 (332)
Q Consensus 54 ~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~ 132 (332)
.+++++++...+|.|..++..+++. .. .+... .....-.|. +.....++.+.+-+. .+.+..||.+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~----~~--~~~~~~v~~~~~~~~-~~s~s~D~~i~~w~~------~~~~~~~~~~ 112 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKT----IT--TITTPNPRTGGEHPA-IISRGPCNRLLLLYP------GNQITILDSK 112 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSC----EE--EEEEECCCTTCCCCS-EEEECSTTEEEEEET------TTEEEEEETT
T ss_pred CCCCEEEEECCCCcEEEEECCCCcE----EE--EEecCCceeeeeCCc-eEEecCCCeEEEEEc------cCceEEeecC
Confidence 4566777777789999999887763 12 22111 000001233 333333366666554 2356678888
Q ss_pred CCcEEEEEecCCCCCCCCCccceEECC--CCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccCeEEEc
Q 020019 133 TWNRLFLTQLSGPSDGKSCADDVTVDA--EGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYH 209 (332)
Q Consensus 133 ~g~~~~~~~l~~~~~~~~~~ndiavd~--dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~ 209 (332)
+++........ . ......++++| +|+.+++-+..+.|..+|.. ++........ .....+.++++
T Consensus 113 ~~~~~~~~~~~--~--~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~---------~~~~i~~~~~~ 179 (343)
T 3lrv_A 113 TNKVLREIEVD--S--ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK---------SDVEYSSGVLH 179 (343)
T ss_dssp TCCEEEEEECC--C--SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC---------SSCCCCEEEEC
T ss_pred CcceeEEeecC--C--CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC---------CCCceEEEEEC
Confidence 87766555442 1 23567899999 89999988888999888876 4443322111 11236799999
Q ss_pred cCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC-CceEEEEcCCC
Q 020019 210 PDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN-PSARLVESSDG 279 (332)
Q Consensus 210 ~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~-~~~~~v~~~dg 279 (332)
|||.++++-...+.|..+|..+++. ....+.. ........+++.++|.++++.. ...++-....+
T Consensus 180 pdg~~lasg~~dg~i~iwd~~~~~~---~~~~~~~--~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~ 245 (343)
T 3lrv_A 180 KDSLLLALYSPDGILDVYNLSSPDQ---ASSRFPV--DEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKD 245 (343)
T ss_dssp TTSCEEEEECTTSCEEEEESSCTTS---CCEECCC--CTTSCEEEEEECTTSSEEEEEESSBEEEEETTSS
T ss_pred CCCCEEEEEcCCCEEEEEECCCCCC---CccEEec--cCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCC
Confidence 9997777667788899999987732 1133332 1234567899999988777753 33333333333
No 255
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.90 E-value=0.00046 Score=63.01 Aligned_cols=182 Identities=12% Similarity=0.056 Sum_probs=98.8
Q ss_pred ceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccce--EE----------------EeCCCCe
Q 020019 49 CAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLG--LV----------------LDHPRNR 110 (332)
Q Consensus 49 gia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--i~----------------vd~~~g~ 110 (332)
++.|+++|+.++.....+.|++++..+++. . .+...+.. ..+.| |+ +.++ ++
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~-----~--~~~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spd-g~ 154 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEE-----Q--VIYTVDEE--WKGYGTWVANSDCTKLVGIEILKRDWQPL-TS 154 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCE-----E--EEEECCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCC-CS
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCc-----E--EEEecccc--cCCCCCEEEeccCCccccccccccccCCC-Cc
Confidence 378999998775554556899999887652 1 22221110 01111 11 1222 11
Q ss_pred -EEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECC-CCc-EEE-EeCCC----CeEEEEcCCCce
Q 020019 111 -LLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGN-AYV-TDVTG----SKIWKVGVKGEF 182 (332)
Q Consensus 111 -l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~-lyv-td~~~----~~I~~v~~~g~~ 182 (332)
+.+.... .......|+++|+++++....... ......+++.| +|+ +++ ++... ..|+.++.++..
T Consensus 155 ~~~~~~~~-~~~~~~~l~~~d~~~g~~~~~~~~------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (396)
T 3c5m_A 155 WEKFAEFY-HTNPTCRLIKVDIETGELEVIHQD------TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN 227 (396)
T ss_dssp HHHHHHHH-HTCCCEEEEEEETTTCCEEEEEEE------SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC
T ss_pred ceeeeeec-cCCCcceEEEEECCCCcEEeeccC------CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc
Confidence 1111000 001235788999998876544322 23456788999 675 554 44222 579999987543
Q ss_pred EEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCC--CCe--EEEEeCCCCCCccceeEEEE-ecCCCCCCCCeEE
Q 020019 183 LSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTF--SGN--LFKIDIVDGVGEGEEIKLIR-VAGGPLSFGDGLE 256 (332)
Q Consensus 183 ~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~--~~~--i~~id~~~~~~~~~~~~~v~-~~g~~~~~pdGi~ 256 (332)
...+.... .......++|+||| .|+++... ... |+.+++.++ ..+.+. .+ ... ++
T Consensus 228 ~~~l~~~~--------~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g-----~~~~l~~~~-----~~~-~~ 288 (396)
T 3c5m_A 228 VRKIKEHA--------EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL-----ENEEVMVMP-----PCS-HL 288 (396)
T ss_dssp CEESSCCC--------TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC-----CEEEEEECC-----SEE-EE
T ss_pred eeEeeccC--------CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC-----CeEEeeeCC-----CCC-CC
Confidence 22221110 01234578999999 66665332 334 999999876 233332 22 112 77
Q ss_pred EeC-CCeEEEE
Q 020019 257 LLS-PTKLVVA 266 (332)
Q Consensus 257 ~~~-dG~l~va 266 (332)
+.+ ||++++.
T Consensus 289 ~s~~dg~~l~~ 299 (396)
T 3c5m_A 289 MSNFDGSLMVG 299 (396)
T ss_dssp EECSSSSEEEE
T ss_pred ccCCCCceEEE
Confidence 888 9887775
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.87 E-value=0.015 Score=57.04 Aligned_cols=116 Identities=11% Similarity=0.060 Sum_probs=71.8
Q ss_pred eEEcCCCCEEEEEecCCeEEEEEC-CCCCCCccceeeeEEecccCcCC---------CccceEEEeCCCCeEEEEEeCcC
Q 020019 50 AKWDDSGRRFIVSFLDGGIGQVAV-PDDYPPGTVLEEVTLVKDLELTG---------NGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 50 ia~d~~g~~~~~~~~~g~I~~vd~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
+++. ++.+|+.+..++.|+.+|. .+++. .|...+.... ....+++++. +++|+...
T Consensus 58 P~v~-~g~vyv~~~~~~~v~AlD~~~tG~~--------~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~v~~~--- 123 (571)
T 2ad6_A 58 PLVI-GDMMYVHSAFPNNTYALNLNDPGKI--------VWQHKPKQDASTKAVMCCDVVDRGLAYGA--GQIVKKQA--- 123 (571)
T ss_dssp CEEE-TTEEEEECSTTTCEEEEETTCTTSE--------EEEECCCCCGGGGGGCTTCSCCCCCEEET--TEEEEECT---
T ss_pred cEEE-CCEEEEEeCCCCEEEEEeCCCCccE--------EEEEcCCCCccccccccccccccccEEEC--CEEEEEeC---
Confidence 4443 4566665543689999999 77762 3443222110 0113567764 89999864
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC-----CCeEEEEcCC-CceE
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT-----GSKIWKVGVK-GEFL 183 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~-----~~~I~~v~~~-g~~~ 183 (332)
.+.|+.+|.++|++.+..++..+..+.......++. +|.+|+.... .+.|+.+|+. |+..
T Consensus 124 ---dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 124 ---NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred ---CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 357999999999998887764211111112223333 5689998764 6899999986 7754
No 257
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.86 E-value=0.0045 Score=56.30 Aligned_cols=166 Identities=13% Similarity=0.059 Sum_probs=100.2
Q ss_pred cccceEEcC-CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCC--CeEEEEEeCcCCCc
Q 020019 46 FRECAKWDD-SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPR--NRLLVVAADVFGNK 122 (332)
Q Consensus 46 ~pegia~d~-~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~--g~l~v~~~~~~~~~ 122 (332)
....+++.+ +++++++...++.|..++..+++. . .....+ .....+.+.+.. +.++++...
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----- 164 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT----A---DVFNFE----ETVYSHHMSPVSTKHCLVAVGTR----- 164 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE----E---EEEECS----SCEEEEEECSSCSSCCEEEEEES-----
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc----c---eeccCC----CceeeeEeecCCCCCcEEEEEcC-----
Confidence 445688999 666777777789999999876652 1 122111 145566776631 334444332
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCCC-c-eEEEecCCCCC---Ccc-
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVKG-E-FLSIISSPLFT---PKE- 195 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~g-~-~~~~~~~~~~~---~p~- 195 (332)
.+.+..||.++++....... .......+++.|++. ++++-...+.|..++... + ....+...... ...
T Consensus 165 ~~~v~~~d~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 239 (408)
T 4a11_B 165 GPKVQLCDLKSGSCSHILQG-----HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVES 239 (408)
T ss_dssp SSSEEEEESSSSCCCEEECC-----CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTT
T ss_pred CCeEEEEeCCCcceeeeecC-----CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecc
Confidence 35689999998876543321 124567899999986 788877888888888652 2 11111110000 000
Q ss_pred -cccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCC
Q 020019 196 -WYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 196 -~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
..........++++|+|..+++-...+.|..+++.++
T Consensus 240 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 240 ANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp SSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred ccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCC
Confidence 0112345688999999944444456677888888764
No 258
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.85 E-value=0.00031 Score=60.09 Aligned_cols=158 Identities=13% Similarity=0.102 Sum_probs=93.5
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecc---cCcCC-CccceEEEeCCCCeEEEEEeCcCCC
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKD---LELTG-NGSLGLVLDHPRNRLLVVAADVFGN 121 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~gi~vd~~~g~l~v~~~~~~~~ 121 (332)
....++++|+|++|.+ .+|.|+++++.+.+. + .|... .+..+ +.-..+.+|++ |.||++ .+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~-----~--~W~~s~t~IG~~Gw~~F~a~~fD~~-G~LYav-~d---- 106 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDN-----D--NWMGRAKKIGNGGWNQFQFLFFDPN-GYLYAV-SK---- 106 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTT-----C--CHHHHCEEEECSCGGGCSEEEECTT-SCEEEE-ET----
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCc-----c--cccccccEecccccccceEEEECCC-CCEEEe-CC----
Confidence 5568999999998877 689999999865432 1 23321 01011 12367899996 999999 32
Q ss_pred ccceEEEEECCC-CcEEEE---EecCCCCC-CCCCccceEECCCCcEEEEeCCCCeEEEEc-CCCceEEEecCCCC-CCc
Q 020019 122 KYSAVAAYDLST-WNRLFL---TQLSGPSD-GKSCADDVTVDAEGNAYVTDVTGSKIWKVG-VKGEFLSIISSPLF-TPK 194 (332)
Q Consensus 122 ~~~~l~~~d~~~-g~~~~~---~~l~~~~~-~~~~~ndiavd~dG~lyvtd~~~~~I~~v~-~~g~~~~~~~~~~~-~~p 194 (332)
+.|+++++.+ +.-.+. ..+ .. +-....-+.++|+|+||... .+.++|-. |.+.-..++..... ...
T Consensus 107 --G~iyr~~pP~~~~~~Wl~~a~~v---g~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~ 179 (236)
T 1tl2_A 107 --DKLYKASPPQSDTDNWIARATEV---GSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQG 179 (236)
T ss_dssp --TEEEEESCCCSTTCCHHHHSEEE---ECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESS
T ss_pred --CEEEEeCCCcCCCCceeccccEe---ccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccC
Confidence 5788888743 221110 011 01 11233679999999999888 66787744 32221111110000 000
Q ss_pred ccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCC
Q 020019 195 EWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVD 231 (332)
Q Consensus 195 ~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~ 231 (332)
......=+.++++|.||..+ ++++|+....+
T Consensus 180 ----g~~~yr~l~f~~~G~l~~v~--~g~~Y~~~~p~ 210 (236)
T 1tl2_A 180 ----GWDTFKFLFFSSVGTLFGVQ--GGKFYEDYPPS 210 (236)
T ss_dssp ----SGGGEEEEEECTTSCEEEEE--TTEEEEESCCC
T ss_pred ----CcceEEEEEECCCCcEEEEe--CCeEEecCCcc
Confidence 00111226699999999988 88999997664
No 259
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.85 E-value=0.014 Score=58.28 Aligned_cols=160 Identities=13% Similarity=0.052 Sum_probs=94.6
Q ss_pred CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCC---------CccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 55 SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTG---------NGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 55 ~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
+|.+|+++. .+.|+.+|..+++. .|..++.... ....+++++. ++||+... .+.
T Consensus 77 ~g~vyv~~~-~~~v~AlD~~tG~~--------~W~~~~~~~~~~~~~~~~~~~~~~~a~~~--~~v~v~~~------dg~ 139 (677)
T 1kb0_A 77 DGIMYVSAS-WSVVHAIDTRTGNR--------IWTYDPQIDRSTGFKGCCDVVNRGVALWK--GKVYVGAW------DGR 139 (677)
T ss_dssp TTEEEEECG-GGCEEEEETTTTEE--------EEEECCCCCGGGGGGSSSCSCCCCCEEET--TEEEEECT------TSE
T ss_pred CCEEEEECC-CCeEEEEECCCCcE--------EEEEcCCCCccccccccccCCCCCceEEC--CEEEEEcC------CCE
Confidence 455665543 58899999988862 3443222110 1124677764 89999864 357
Q ss_pred EEEEECCCCcEEEEEecC-CCCCCCCCccceEECCCCcEEEEeCC-----CCeEEEEcCC-CceEEEecCC--CCCCcc-
Q 020019 126 VAAYDLSTWNRLFLTQLS-GPSDGKSCADDVTVDAEGNAYVTDVT-----GSKIWKVGVK-GEFLSIISSP--LFTPKE- 195 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~-~~~~~~~~~ndiavd~dG~lyvtd~~-----~~~I~~v~~~-g~~~~~~~~~--~~~~p~- 195 (332)
|+.+|.++|++.+..... .+..........+++ +|.+|+.... .+.|+.+|.. |+..-..... ....+.
T Consensus 140 l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~ 218 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFE 218 (677)
T ss_dssp EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCS
T ss_pred EEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccc
Confidence 999999999998887763 111111222223343 4679998763 5889999975 7754322211 000000
Q ss_pred ----------cc---------cCccccCeEEEccCc-eEEEEeCCC------------------CeEEEEeCCCC
Q 020019 196 ----------WY---------KNLVGLNGIVYHPDG-FLIVIHTFS------------------GNLFKIDIVDG 232 (332)
Q Consensus 196 ----------~~---------~~~~~~nGi~~~~dG-~Lyva~~~~------------------~~i~~id~~~~ 232 (332)
+. .+...-..+++++++ .||+..... +.|+.+|++++
T Consensus 219 ~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG 293 (677)
T 1kb0_A 219 DESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTG 293 (677)
T ss_dssp SHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC
T ss_pred ccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCC
Confidence 00 000111468999987 999876542 25999999988
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.84 E-value=0.028 Score=55.20 Aligned_cols=203 Identities=17% Similarity=0.145 Sum_probs=108.4
Q ss_pred eEEEeCCCCeEEEEEeCcCC------------------CccceEEEEECCCCcEEEEEecCCCCC-CCCCc-cceEEC--
Q 020019 101 GLVLDHPRNRLLVVAADVFG------------------NKYSAVAAYDLSTWNRLFLTQLSGPSD-GKSCA-DDVTVD-- 158 (332)
Q Consensus 101 gi~vd~~~g~l~v~~~~~~~------------------~~~~~l~~~d~~~g~~~~~~~l~~~~~-~~~~~-ndiavd-- 158 (332)
.+++|++++.+|+....... .-.+.|+.+|+++|+..+.++...... ....+ .-+.++
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~ 329 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYK 329 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeee
Confidence 47889888999998752100 001579999999999998887632110 00111 123333
Q ss_pred -CCCc---EEEEeCCCCeEEEEcCC-CceEEEecCC--------------------CCCCc-------c-----cccCcc
Q 020019 159 -AEGN---AYVTDVTGSKIWKVGVK-GEFLSIISSP--------------------LFTPK-------E-----WYKNLV 201 (332)
Q Consensus 159 -~dG~---lyvtd~~~~~I~~v~~~-g~~~~~~~~~--------------------~~~~p-------~-----~~~~~~ 201 (332)
.+|+ +++.-..+|.+|.+|.+ |+.+...... .+..+ . ..|...
T Consensus 330 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 409 (582)
T 1flg_A 330 AKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFL 409 (582)
T ss_dssp CSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTT
T ss_pred cCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCc
Confidence 3563 55555667788888864 6543221110 01000 0 001111
Q ss_pred ---ccCeEEEccCc-eEEEEeC--------------------------------CCCeEEEEeCCCCCCccceeEEEEec
Q 020019 202 ---GLNGIVYHPDG-FLIVIHT--------------------------------FSGNLFKIDIVDGVGEGEEIKLIRVA 245 (332)
Q Consensus 202 ---~~nGi~~~~dG-~Lyva~~--------------------------------~~~~i~~id~~~~~~~~~~~~~v~~~ 245 (332)
.-.+++++|+. .+|+... ..+.|+.+|+.+++ .+=.++..
T Consensus 410 Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~----~~W~~~~~ 485 (582)
T 1flg_A 410 GGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGK----VVWEHKEH 485 (582)
T ss_dssp CSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCC----EEEEEEES
T ss_pred cccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCC----EEEEecCC
Confidence 12467899886 8887542 24678899998873 23223332
Q ss_pred CCCCCCCCeEEEeCCCeEEEEeCC-ceEEEEcCCCceEEEEEeeecCCCcccceEEEE-ECCeEEEEEecC
Q 020019 246 GGPLSFGDGLELLSPTKLVVAGNP-SARLVESSDGWETAAVVAKFSGPVHRLATAATV-KDGRVYLNHMLG 314 (332)
Q Consensus 246 g~~~~~pdGi~~~~dG~l~va~~~-~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv~~~~g 314 (332)
. ..-.|.....+|.+|+.... ..+.+...+| +++-....+.....+-+++ .+|++||....|
T Consensus 486 -~--~~~~g~~~tagglvf~g~~dg~l~A~D~~tG----~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 486 -L--PLWAGVLATAGNLVFTGTGDGYFKAFDAKSG----KELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp -S--CCCSCCEEETTTEEEEECTTSEEEEEETTTC----CEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred -C--CCcccceEeCCCEEEEECCCCcEEEEECCCC----CEEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 1 11123344567888887643 3444566677 2332222222111122555 899999966655
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.81 E-value=0.0085 Score=59.87 Aligned_cols=201 Identities=13% Similarity=0.132 Sum_probs=101.8
Q ss_pred eEEEeCCCCeEEEEEeCcCC------------C-ccceEEEEECCCCcEEEEEecCCCCC-C--C---CCccceEECCCC
Q 020019 101 GLVLDHPRNRLLVVAADVFG------------N-KYSAVAAYDLSTWNRLFLTQLSGPSD-G--K---SCADDVTVDAEG 161 (332)
Q Consensus 101 gi~vd~~~g~l~v~~~~~~~------------~-~~~~l~~~d~~~g~~~~~~~l~~~~~-~--~---~~~ndiavd~dG 161 (332)
.+++|++.+.+|+...+... + -.+.|+.+|+++|+..+..+...... . . ....++.+|.+.
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 47899877899988643210 0 01258999999999998887631100 0 0 111223332211
Q ss_pred -cEEEEeCCCCeEEEEcCC-CceEEEecC----------CCCCCccc-------------cc---CccccCeEEEccCc-
Q 020019 162 -NAYVTDVTGSKIWKVGVK-GEFLSIISS----------PLFTPKEW-------------YK---NLVGLNGIVYHPDG- 212 (332)
Q Consensus 162 -~lyvtd~~~~~I~~v~~~-g~~~~~~~~----------~~~~~p~~-------------~~---~~~~~nGi~~~~dG- 212 (332)
.+++.-..+|.+|.+|.. |+.+..... .....|.. .+ +...-.+++++|+.
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 133334456677777654 554311100 00000000 00 11123458999986
Q ss_pred eEEEEeC-----------------------------------CCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEE
Q 020019 213 FLIVIHT-----------------------------------FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLEL 257 (332)
Q Consensus 213 ~Lyva~~-----------------------------------~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~ 257 (332)
.+|+... ..+.|+.+|+.+++ .+-.++.. . ..-.+...
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~----~~W~~~~~-~--~~~~~~~~ 466 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQK----AAWKVPYP-T--HWNGGTLS 466 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTE----EEEEEEES-S--SCCCCEEE
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCc----EEEEccCC-C--CCcCceeE
Confidence 8887421 12678899998872 23223332 1 11123444
Q ss_pred eCCCeEEEEeCCc-eEEEEcCCCceEEEEEeeecCCC--cccceEEEE-ECCeEEEEEecC
Q 020019 258 LSPTKLVVAGNPS-ARLVESSDGWETAAVVAKFSGPV--HRLATAATV-KDGRVYLNHMLG 314 (332)
Q Consensus 258 ~~dG~l~va~~~~-~~~v~~~dg~~~~~~~~~~~~~~--~~~pt~va~-~~g~lyv~~~~g 314 (332)
..+|.+|+.+... .+.+...+| +++..+..+. ...| ++. .+|++||+..-|
T Consensus 467 t~gg~vf~g~~dg~l~a~d~~tG----~~l~~~~~~~~~~~~p--~~~~~~G~~yva~~~G 521 (668)
T 1kv9_A 467 TAGNLVFQGTAAGQMHAYSADKG----EALWQFEAQSGIVAAP--MTFELAGRQYVAIMAG 521 (668)
T ss_dssp ETTTEEEEECTTSEEEEEETTTC----CEEEEEECSSCCCSCC--EEEEETTEEEEEEEEC
T ss_pred eCCCEEEEECCcccchhhhhhcC----hhheEecCCCCcccCc--eEEEECCEEEEEEEec
Confidence 5678888886443 444556667 2332222121 2234 444 789999855444
No 262
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.78 E-value=0.0093 Score=59.66 Aligned_cols=192 Identities=12% Similarity=0.112 Sum_probs=108.5
Q ss_pred ccceEEcCCCCEEEEE-ecCC----eEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCC-
Q 020019 47 RECAKWDDSGRRFIVS-FLDG----GIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG- 120 (332)
Q Consensus 47 pegia~d~~g~~~~~~-~~~g----~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~- 120 (332)
..+++++|||+.+... ...| .|+.++..+++. .. .... . ....+++..+|...|+++..+...
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~----~~--~~~~--~---~~~~~~~wspDg~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKE----LP--DVLE--R---VKFSCMAWTHDGKGMFYNAYPQQDG 195 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEE----EE--EEEE--E---ECSCCEEECTTSSEEEEEECCCCSS
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC----Cc--cccc--C---cccceEEEEeCCCEEEEEEECCccc
Confidence 3468999999966544 3333 799999987752 11 1111 1 124578999874456666543210
Q ss_pred ---------CccceEEEEECCCCcE--EEEEecCCCCCCCCCccceEECCCCc-EEEEeC-C---CCeEEEEcCCC----
Q 020019 121 ---------NKYSAVAAYDLSTWNR--LFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDV-T---GSKIWKVGVKG---- 180 (332)
Q Consensus 121 ---------~~~~~l~~~d~~~g~~--~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~-~---~~~I~~v~~~g---- 180 (332)
.....|+++++.+++. ...... +. ...+..++.+.|||+ |+++.. . ...|+.++.++
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~--~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF--PD-EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC--TT-CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSS
T ss_pred cccccccccCCCCEEEEEECCCCcccceEEecc--CC-CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccc
Confidence 1134588999987752 222222 11 123456789999996 554432 2 56899988753
Q ss_pred -----ceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCC---CCeEEEEeCCCCCCccceeEEEEecCCCCCC
Q 020019 181 -----EFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTF---SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSF 251 (332)
Q Consensus 181 -----~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~---~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~ 251 (332)
+...+.... ...--.+++|| .||+.... ..+|++++++++.. ...+.+... .....
T Consensus 273 ~~~~~~~~~l~~~~------------~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~~l~~~-~~~~~ 337 (710)
T 2xdw_A 273 ITGILKWVKLIDNF------------EGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE--SKWKVLVPE-HEKDV 337 (710)
T ss_dssp SCSSCCCEEEECSS------------SSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG--GGCEEEECC-CSSCE
T ss_pred cCCccceEEeeCCC------------CcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc--ccceeccCC-CCCCe
Confidence 233322111 11122577888 88877553 45899999986521 012333222 11123
Q ss_pred CCeEEEeCCCeEEEEe
Q 020019 252 GDGLELLSPTKLVVAG 267 (332)
Q Consensus 252 pdGi~~~~dG~l~va~ 267 (332)
..++++.+++.|+++.
T Consensus 338 ~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 338 LEWVACVRSNFLVLCY 353 (710)
T ss_dssp EEEEEEETTTEEEEEE
T ss_pred EEEEEEEcCCEEEEEE
Confidence 4577777678888774
No 263
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.72 E-value=0.00069 Score=66.06 Aligned_cols=182 Identities=15% Similarity=0.077 Sum_probs=100.5
Q ss_pred ceEEcCCCC-EEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEE-EeCcCCCccceE
Q 020019 49 CAKWDDSGR-RFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVV-AADVFGNKYSAV 126 (332)
Q Consensus 49 gia~d~~g~-~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~-~~~~~~~~~~~l 126 (332)
..+++++|+ +++++...+.+..++.++++. . .+...+ . ..++++|+ |+.++. ..+.. ....|
T Consensus 114 ~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-----~--~l~~~~-----~-~~~~~spD-G~~la~~~~~~~--~~~~i 177 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATEDRVALYALDGGGL-----R--ELARLP-----G-FGFVSDIR-GDLIAGLGFFGG--GRVSL 177 (582)
T ss_dssp EEEEEECSSCEEEEEECSSCEEEEEEETTEE-----E--EEEEES-----S-CEEEEEEE-TTEEEEEEEEET--TEEEE
T ss_pred eeeeCCCCCeEEEEecCCCCceEEEccCCcE-----E--EeecCC-----C-ceEEECCC-CCEEEEEEEcCC--CCeEE
Confidence 356777775 455554445555667666642 1 233222 1 67889997 765553 32211 12458
Q ss_pred EEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCC--eEEEEcCCCceEEEecCCCCCCcccccCccccC
Q 020019 127 AAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGS--KIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 127 ~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~--~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
+.+|+++++...... .....+.+++.|||+.+++....+ .|+++|.++........... .........+.
T Consensus 178 ~~~d~~~g~~~~l~~------~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~ 249 (582)
T 3o4h_A 178 FTSNLSSGGLRVFDS------GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSK--DFSSYRPTAIT 249 (582)
T ss_dssp EEEETTTCCCEEECC------SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCS--HHHHHCCSEEE
T ss_pred EEEcCCCCCceEeec------CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCc--Chhhhhhcccc
Confidence 999999888653211 123457899999997444444445 89999988543333221111 00000001122
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
..+|+|||.+|++....+++..++. ++ ... .. ......++++ +|+++++.
T Consensus 250 ~~~~spdg~~~~~~~~~g~~~l~~~--g~----~~~---~~---~~~v~~~~~s-dg~~l~~~ 299 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARREGRSAVFID--GE----RVE---AP---QGNHGRVVLW-RGKLVTSH 299 (582)
T ss_dssp EEEECTTSCEEEEEEETTEEEEEET--TE----EEC---CC---SSEEEEEEEE-TTEEEEEE
T ss_pred ceeEcCCCcEEEEEEcCCcEEEEEE--CC----eec---cC---CCceEEEEec-CCEEEEEE
Confidence 3349999977777766676665665 41 221 11 1234577888 88877763
No 264
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.71 E-value=0.031 Score=51.80 Aligned_cols=224 Identities=11% Similarity=0.076 Sum_probs=123.7
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
....+++|+++|+.+++...++.|..++..+++. .. .+.... .....+..++ .+.++.. ...
T Consensus 148 ~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~----~~--~~~~h~----~~v~~~s~~~---~~l~sgs-----~d~ 209 (420)
T 4gga_A 148 EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR----LR--NMTSHS----ARVGSLSWNS---YILSSGS-----RSG 209 (420)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE----EE--EECCCS----SCEEEEEEET---TEEEEEE-----TTS
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE----EE--EEeCCC----CceEEEeeCC---CEEEEEe-----CCC
Confidence 3456799999999888888889999999876652 11 221111 1344555553 3344332 235
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCcccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGL 203 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~ 203 (332)
.+..||........ ..+.+ .......+.+.++|+.+++-...+.|..++.. ++..... .... .......
T Consensus 210 ~i~~~d~~~~~~~~-~~~~~---h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~-~~~~-----~~~~~~V 279 (420)
T 4gga_A 210 HIHHHDVRVAEHHV-ATLSG---HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP-LQTF-----TQHQGAV 279 (420)
T ss_dssp EEEEEETTSSSCEE-EEEEC---CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCC-SEEE-----CCCSSCE
T ss_pred ceeEeeecccceee-EEecc---cccceeeeeecCCCCeeeeeeccccceEEeecccccccee-eeee-----cccCCce
Confidence 67888887644322 22211 12456678899999888887777877777654 2211000 0000 0012235
Q ss_pred CeEEEccCc-eEEEEe--CCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEE-e---CCceEEEEc
Q 020019 204 NGIVYHPDG-FLIVIH--TFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVA-G---NPSARLVES 276 (332)
Q Consensus 204 nGi~~~~dG-~Lyva~--~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va-~---~~~~~~v~~ 276 (332)
..++++|++ .++++- ...+.|..+++.+++ ....+... .....+.+.++++.+++ . .+.+.+...
T Consensus 280 ~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~----~~~~~~~~----~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~ 351 (420)
T 4gga_A 280 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA----CLSAVDAH----SQVCSILWSPHYKELISGHGFAQNQLVIWKY 351 (420)
T ss_dssp EEEEECTTCTTEEEEEECTTTCEEEEEETTTTE----EEEEEECS----SCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred eeeeeCCCcccEEEEEeecCCCEEEEEeCCccc----cceeeccc----cceeeeeecCCCCeEEEEEecCCCEEEEEEC
Confidence 688999987 665543 345788888988772 34434332 33456777777654444 3 223444455
Q ss_pred CCCceEEEEEeeecCCCcccceEEEE-ECCeEEE
Q 020019 277 SDGWETAAVVAKFSGPVHRLATAATV-KDGRVYL 309 (332)
Q Consensus 277 ~dg~~~~~~~~~~~~~~~~~pt~va~-~~g~lyv 309 (332)
+++... ..+.+ .-...+++++ .++++.+
T Consensus 352 ~~~~~v----~~l~g-H~~~V~~l~~spdg~~l~ 380 (420)
T 4gga_A 352 PTMAKV----AELKG-HTSRVLSLTMSPDGATVA 380 (420)
T ss_dssp TTCCEE----EEECC-CSSCEEEEEECTTSSCEE
T ss_pred CCCcEE----EEEcC-CCCCEEEEEEcCCCCEEE
Confidence 666332 22221 0122356677 4554444
No 265
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.71 E-value=0.033 Score=52.00 Aligned_cols=229 Identities=11% Similarity=0.068 Sum_probs=128.0
Q ss_pred cccceEEc--CCCCEEEEEecCCeEEEEECCCCCCCccceee---eEEecccC--------cCC--CccceEEEeCCCCe
Q 020019 46 FRECAKWD--DSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEE---VTLVKDLE--------LTG--NGSLGLVLDHPRNR 110 (332)
Q Consensus 46 ~pegia~d--~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~---~~~~~~~~--------~~~--~~~~gi~vd~~~g~ 110 (332)
....+++. ++++.+++...++.|..++..++......... ......+. ..+ .....+ .++...
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~ 282 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNI 282 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTE
T ss_pred ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCE
Confidence 34456666 56677777777899999987765421000000 00000000 000 122333 443244
Q ss_pred EEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCC
Q 020019 111 LLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSP 189 (332)
Q Consensus 111 l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~ 189 (332)
++++.. .+.+..||.++++......- .......++++++|+.+++-+..+.|..++.. ++....+...
T Consensus 283 l~~~~~------d~~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 351 (464)
T 3v7d_B 283 VVSGSY------DNTLIVWDVAQMKCLYILSG-----HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH 351 (464)
T ss_dssp EEEEET------TSCEEEEETTTTEEEEEECC-----CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEEEeC------CCeEEEEECCCCcEEEEecC-----CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCC
Confidence 444443 35689999998876644321 13457789999999988888888999999975 5544333211
Q ss_pred CCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC
Q 020019 190 LFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP 269 (332)
Q Consensus 190 ~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~ 269 (332)
......++++ +...++-...+.|..+++.++. ........ .....+++.++|+++++...
T Consensus 352 ----------~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~----~~~~~~~~----~~~~~~~~~~~~~~l~~~~d 411 (464)
T 3v7d_B 352 ----------TALVGLLRLS--DKFLVSAAADGSIRGWDANDYS----RKFSYHHT----NLSAITTFYVSDNILVSGSE 411 (464)
T ss_dssp ----------SSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC----EEEEEECT----TCCCEEEEEECSSEEEEEET
T ss_pred ----------CCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc----eeeeecCC----CCccEEEEEeCCCEEEEecC
Confidence 1234577776 4344444567789889988652 22222211 33456788888888877643
Q ss_pred -ceEEEEcCCCceEEEEEeeecCCCcccceEEEEECCeEEEEE
Q 020019 270 -SARLVESSDGWETAAVVAKFSGPVHRLATAATVKDGRVYLNH 311 (332)
Q Consensus 270 -~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~~~g~lyv~~ 311 (332)
...+....+| ++......+.......+++.++.++++.
T Consensus 412 g~i~iwd~~~g----~~~~~~~~~~~~~v~~v~~~~~~l~~~~ 450 (464)
T 3v7d_B 412 NQFNIYNLRSG----KLVHANILKDADQIWSVNFKGKTLVAAV 450 (464)
T ss_dssp TEEEEEETTTC----CEEESCTTTTCSEEEEEEEETTEEEEEE
T ss_pred CeEEEEECCCC----cEEehhhccCCCcEEEEEecCCEEEEEE
Confidence 3444455666 3333211122233466777777777643
No 266
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.69 E-value=0.0013 Score=61.69 Aligned_cols=147 Identities=10% Similarity=0.113 Sum_probs=94.5
Q ss_pred ccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECC-CCcEEEEeCCCCeEEEE
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-EGNAYVTDVTGSKIWKV 176 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-dG~lyvtd~~~~~I~~v 176 (332)
.+..|+++|.++++.++.. ..+.|.+||.++++......+.++ ....+++++.| +++++++-+..+.|...
T Consensus 121 ~V~~l~~~P~~~~~lasGs-----~dg~i~lWd~~~~~~~~~~~~~gH---~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGS-----KGGDIMLWNFGIKDKPTFIKGIGA---GGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEEEECSSCTTCEEEEE-----TTSCEEEECSSCCSCCEEECCCSS---SCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred CEEEEEEeCCCCCEEEEEe-----CCCEEEEEECCCCCceeEEEccCC---CCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 4678999986565554432 245689999988765554554321 24578899998 57888998888999888
Q ss_pred cCCCceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEE
Q 020019 177 GVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLE 256 (332)
Q Consensus 177 ~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~ 256 (332)
|..++.......... .......++++++|.++++-...+.|..+++++. .+..+.. .......++
T Consensus 193 d~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-----~~~~~~~---h~~~v~~v~ 257 (435)
T 4e54_B 193 DFKGNILRVFASSDT-------INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-----ELWNLRM---HKKKVTHVA 257 (435)
T ss_dssp ETTSCEEEEEECCSS-------CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-----BCCCSBC---CSSCEEEEE
T ss_pred eccCCceeEEeccCC-------CCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-----eeEEEec---ccceEEeee
Confidence 887664433322111 1123567999999966666667888988998754 2221211 223456788
Q ss_pred EeCCCe-EEEEe
Q 020019 257 LLSPTK-LVVAG 267 (332)
Q Consensus 257 ~~~dG~-l~va~ 267 (332)
+.+++. ++++.
T Consensus 258 ~~p~~~~~~~s~ 269 (435)
T 4e54_B 258 LNPCCDWFLATA 269 (435)
T ss_dssp ECTTCSSEEEEE
T ss_pred ecCCCceEEEEe
Confidence 888765 55443
No 267
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.68 E-value=0.027 Score=50.42 Aligned_cols=202 Identities=6% Similarity=0.000 Sum_probs=107.8
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++++|+++++++...++.|..++...........+....+. + -......++++++ ++++++... .+.
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~--~-h~~~V~~v~~sp~-g~~las~s~-----D~~ 130 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE--G-HENEVKGVAWSND-GYYLATCSR-----DKS 130 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-------CEEEEEECTT-SCEEEEEET-----TSC
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc--C-CCCcEEEEEECCC-CCEEEEEeC-----CCE
Confidence 345789999999888777789998888643210000001001111 1 0125688999997 665554432 356
Q ss_pred EEEEECCC-Cc-EEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-C--ceEEEecCCCCCCcccccCc
Q 020019 126 VAAYDLST-WN-RLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-G--EFLSIISSPLFTPKEWYKNL 200 (332)
Q Consensus 126 l~~~d~~~-g~-~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g--~~~~~~~~~~~~~p~~~~~~ 200 (332)
+..||.+. ++ ......+.+ .....+.+++.|+|+++++-+..+.|...+.. + +....+.. ..
T Consensus 131 v~iwd~~~~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~----------h~ 197 (330)
T 2hes_X 131 VWIWETDESGEEYECISVLQE---HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNG----------HE 197 (330)
T ss_dssp EEEEECCTTCCCCEEEEEECC---CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC----------CS
T ss_pred EEEEeccCCCCCeEEEEEecc---CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccC----------CC
Confidence 88999843 22 122223321 12457789999999988888877877666543 2 22222211 11
Q ss_pred cccCeEEEccC--ceEEEEeCCCCeEEEEeCCCCCCccc-e-eEEEEecCCCCCCCCeEEEeCCCeEEEEeCC
Q 020019 201 VGLNGIVYHPD--GFLIVIHTFSGNLFKIDIVDGVGEGE-E-IKLIRVAGGPLSFGDGLELLSPTKLVVAGNP 269 (332)
Q Consensus 201 ~~~nGi~~~~d--G~Lyva~~~~~~i~~id~~~~~~~~~-~-~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~ 269 (332)
.....++|+++ +.+.++-...+.|..+++..+..... . .......+........+++.+++.|+.+...
T Consensus 198 ~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~d 270 (330)
T 2hes_X 198 GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGAD 270 (330)
T ss_dssp SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETT
T ss_pred CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCC
Confidence 23468899998 54455555566665555542210000 1 1111122112234567888877766555533
No 268
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.0019 Score=65.31 Aligned_cols=196 Identities=8% Similarity=-0.032 Sum_probs=114.1
Q ss_pred cccceEEcCC--CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCC--CCeEEEEEeCcCCC
Q 020019 46 FRECAKWDDS--GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHP--RNRLLVVAADVFGN 121 (332)
Q Consensus 46 ~pegia~d~~--g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~--~g~l~v~~~~~~~~ 121 (332)
...++++.++ ++.+++...+|.|..++..+++. ....... . .......++++++ ...++++..
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~-----~~~~~~~--~-h~~~V~~v~~sp~~~~~~l~sgs~----- 121 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW-----SQIAVHA--V-HSASVNSVQWAPHEYGPLLLVASS----- 121 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE-----EEEEEEC--C-CSSCEEEEEECCGGGCSEEEEEET-----
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc-----ccccccc--C-CCCCeEEEEECCCCCCCEEEEEeC-----
Confidence 4457889887 88888877789999998776541 1001111 1 1125688999985 334444433
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECC-------------CCcEEEEeCCCCeEEEEcCC-C-ceEEEe
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDA-------------EGNAYVTDVTGSKIWKVGVK-G-EFLSII 186 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~-------------dG~lyvtd~~~~~I~~v~~~-g-~~~~~~ 186 (332)
.+.+..||.+++.......+.+ .......+++.| +|+.+++.+..+.|..++.. + ......
T Consensus 122 -dg~I~vwdl~~~~~~~~~~~~~---~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 197 (753)
T 3jro_A 122 -DGKVSVVEFKENGTTSPIIIDA---HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 197 (753)
T ss_dssp -TSEEEEEECCSSSCCCCEEEEC---CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred -CCcEEEEEeecCCCcceeEeec---CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceee
Confidence 4578999998763322222211 124566788888 57777777777877777653 2 111111
Q ss_pred cCCCCCCcccccCccccCeEEEccC---ceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeE
Q 020019 187 SSPLFTPKEWYKNLVGLNGIVYHPD---GFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKL 263 (332)
Q Consensus 187 ~~~~~~~p~~~~~~~~~nGi~~~~d---G~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l 263 (332)
. .+. ........++++|+ |.++++-...+.|..+++.++.. .....+............+++.++|++
T Consensus 198 ~--~~~-----~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~--~~~~~~~~~~~~~~~v~~l~~spdg~~ 268 (753)
T 3jro_A 198 S--TLE-----GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG--PWKKTLLKEEKFPDVLWRASWSLSGNV 268 (753)
T ss_dssp E--EEC-----CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSS--CCBCCBSSSSCCSSCCCCEEECTTTCC
T ss_pred e--eec-----CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCC--cceeEEeccCCCCCceEEEEEcCCCCE
Confidence 0 000 01234679999999 86666666678888888876421 011111111012245668899999887
Q ss_pred EEEe
Q 020019 264 VVAG 267 (332)
Q Consensus 264 ~va~ 267 (332)
+++.
T Consensus 269 l~s~ 272 (753)
T 3jro_A 269 LALS 272 (753)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7664
No 269
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.002 Score=62.95 Aligned_cols=200 Identities=11% Similarity=0.026 Sum_probs=115.8
Q ss_pred eeEEEecCC--ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEE
Q 020019 36 HVYHYHSSS--FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLV 113 (332)
Q Consensus 36 ~~i~~~~~~--~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v 113 (332)
+++.+.... ...++++|+|||+++.+...+++|. ++...+ .+..++ .....+++.|+ |
T Consensus 5 ~~~~~~~~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---------~l~gh~----~~v~~V~FsPd-g---- 64 (588)
T 2j04_A 5 KDLLVDRKEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---------DINCNS----KNLFHVKEFPL-E---- 64 (588)
T ss_dssp BCEEECSCCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---------CCSSBG----GGTEEEEEECC-C----
T ss_pred HhhcccHhHhhccEEEEEECCCCCEEEEEcCCceee--cccccc---------eecCCC----ccEEEEEECCC-C----
Confidence 445554433 3778999999999887777677777 544333 121112 25788899996 6
Q ss_pred EEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCC
Q 020019 114 VAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTP 193 (332)
Q Consensus 114 ~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~ 193 (332)
.+ ..|+..+++......+. . ......+++.|||....+-+..+.|..++.++. ...+. .....
T Consensus 65 --~~---------~~~~~~~~~~~~~~~~~--~--~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~-l~~l~-~~~~~ 127 (588)
T 2j04_A 65 --FE---------NKLDFELAQQNGLLNSQ--P--VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKM-LTNLD-SKGNL 127 (588)
T ss_dssp --CC---------CTTTTSCCCSSCSSTTS--C--SCCEEEEEECSSSSCEEEEETTSCEEEEETTEE-EEECC-CSSCS
T ss_pred --Cc---------ceEEEEeCCCceEeecC--C--CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCce-eeecc-CCCcc
Confidence 11 11233333211112221 1 356788999999998888888888888886552 22222 11100
Q ss_pred cccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccc---eeEEEEecC-CCCCCCCeEEEeCCCeEEEEeC
Q 020019 194 KEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGE---EIKLIRVAG-GPLSFGDGLELLSPTKLVVAGN 268 (332)
Q Consensus 194 p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~---~~~~v~~~g-~~~~~pdGi~~~~dG~l~va~~ 268 (332)
.......++|+||| .|+++ ...++|.-+++.++..... .+..+.... .+......+++.||| +.++..
T Consensus 128 -----~~~sv~svafSPDG~~LAsg-s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~ 200 (588)
T 2j04_A 128 -----SSRTYHCFEWNPIESSIVVG-NEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALS 200 (588)
T ss_dssp -----TTTCEEEEEECSSSSCEEEE-ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEET
T ss_pred -----ccccEEEEEEcCCCCEEEEE-cCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeC
Confidence 01246799999999 66665 4577888888886632000 133333211 123457789999999 655554
Q ss_pred C-ceEEEEcCCC
Q 020019 269 P-SARLVESSDG 279 (332)
Q Consensus 269 ~-~~~~v~~~dg 279 (332)
. ..++.....+
T Consensus 201 D~tVrlWd~~~~ 212 (588)
T 2j04_A 201 NNSVFSMTVSAS 212 (588)
T ss_dssp TCCEEEECCCSS
T ss_pred CCeEEEEECCCC
Confidence 3 3444344333
No 270
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.67 E-value=0.0015 Score=68.44 Aligned_cols=180 Identities=13% Similarity=0.035 Sum_probs=110.7
Q ss_pred cccceEEc-CCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCe-EEEEEeCcCCCcc
Q 020019 46 FRECAKWD-DSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR-LLVVAADVFGNKY 123 (332)
Q Consensus 46 ~pegia~d-~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~-l~v~~~~~~~~~~ 123 (332)
.+.+++++ |+|+.++... .+.|+.++..+++. . .+...++ ..+..+++. + |+ ++++.. .
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~-----~--~~~~~~~---~~~~~~~~s-d-g~~l~~~s~------~ 357 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYV-----L--KVPEPLR---IRYVRRGGD-T-KVAFIHGTR------E 357 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBE-----E--ECSCCSC---EEEEEECSS-S-EEEEEEEET------T
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCce-----E--EccCCCc---ceEEeeeEc-C-CCeEEEEEC------C
Confidence 46789999 9998554443 68999998775541 1 2211111 134566777 5 54 444432 2
Q ss_pred ceEE-EEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCcc
Q 020019 124 SAVA-AYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 124 ~~l~-~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~ 201 (332)
..++ .||.++++... +.. .......+++.|||+.+++....+.|+.++.+ |+........ ..
T Consensus 358 ~~l~~~~d~~~~~~~~---l~~---~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~----------~~ 421 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEK---FEE---NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR----------EA 421 (1045)
T ss_dssp EEEEEEEETTTCCEEE---CCC---CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS----------SS
T ss_pred CceEEEEECCCCCceE---ecC---CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC----------CC
Confidence 4688 89998776542 321 13567789999999855555556799999986 4544443211 11
Q ss_pred ccCeEEEccCc-eEEEEeCCC---------CeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCe-EEEEeC
Q 020019 202 GLNGIVYHPDG-FLIVIHTFS---------GNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTK-LVVAGN 268 (332)
Q Consensus 202 ~~nGi~~~~dG-~Lyva~~~~---------~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~-l~va~~ 268 (332)
....++|+||| .|.++.... +.|+.+++.++ ... .+. ........+++.+||+ ||++..
T Consensus 422 ~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g-----~~~--~l~-~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 422 MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR-----KIF--AAT-TENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT-----EEE--ECS-CSSSBEEEEEECTTSCEEEEEES
T ss_pred CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC-----cEE--Eee-CCCcccCCceEcCCCCEEEEEec
Confidence 24689999999 676654432 58999998876 332 222 1223445688999987 555543
No 271
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.01 Score=55.09 Aligned_cols=162 Identities=7% Similarity=-0.003 Sum_probs=101.5
Q ss_pred EcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEEC
Q 020019 52 WDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDL 131 (332)
Q Consensus 52 ~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~ 131 (332)
+.++++.+++...++.|..+|..+++. .. .+...+.. ..+..++++++ +.++++... .+.|..||.
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~--~~~~~~h~--~~v~~~~~s~~-~~~l~s~~~-----dg~i~iwd~ 243 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLER----LQ--IIENSPRH--GAVSSICIDEE-CCVLILGTT-----RGIIDIWDI 243 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCE----EE--EEECCGGG--CCEEEEEECTT-SCEEEEEET-----TSCEEEEET
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCee----eE--EEccCCCC--CceEEEEECCC-CCEEEEEcC-----CCeEEEEEc
Confidence 456788777777789999999876652 11 23211111 25789999997 664444332 356899999
Q ss_pred CCCcEEEEEecCCCCCCCCCccceEEC----CCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCC------Cccc----
Q 020019 132 STWNRLFLTQLSGPSDGKSCADDVTVD----AEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFT------PKEW---- 196 (332)
Q Consensus 132 ~~g~~~~~~~l~~~~~~~~~~ndiavd----~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~------~p~~---- 196 (332)
++++....+.+. . ......+++. ++|.++++-+..+.|..+|.. ++....+...... .|..
T Consensus 244 ~~~~~~~~~~~~--~--~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (437)
T 3gre_A 244 RFNVLIRSWSFG--D--HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLE 319 (437)
T ss_dssp TTTEEEEEEBCT--T--CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGG
T ss_pred CCccEEEEEecC--C--CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccc
Confidence 988876655542 1 2345567444 567788888888889999876 5543332211100 0000
Q ss_pred ----c--cCccccCeEEEccCceEEEEeCCCCeEEEEeCCCC
Q 020019 197 ----Y--KNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 197 ----~--~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
. ........++++ ++.++++-...++|..+++.++
T Consensus 320 ~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 320 ELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp GCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred cceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence 0 012236789999 7766667777889999999876
No 272
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.61 E-value=0.003 Score=63.60 Aligned_cols=153 Identities=11% Similarity=0.089 Sum_probs=87.1
Q ss_pred cceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCC--ccceEEEeCCCCe-EEEEEeCcC---CC
Q 020019 48 ECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGN--GSLGLVLDHPRNR-LLVVAADVF---GN 121 (332)
Q Consensus 48 egia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gi~vd~~~g~-l~v~~~~~~---~~ 121 (332)
.++.|.++|.+++.+ ++.|+.++..+++. ..++........ ....+.++|| |+ |.+...+.. .+
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Spd-g~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNS-------SVFLENSTFDEFGHSINDYSISPD-GQFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCE-------EEEECTTTTTTCCSCCCEEEECTT-SSEEEEEEEEEECSSSC
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCce-------EEEEechhhhhhcccccceEECCC-CCEEEEEECCeeeEEEc
Confidence 478999999877665 78999999987762 134332221111 2245788997 55 444443211 01
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCCC-ceEEEecCCCCC-----Cc
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVKG-EFLSIISSPLFT-----PK 194 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~g-~~~~~~~~~~~~-----~p 194 (332)
..+.++.||.++++.. .+.. ........++.|||+ |.++. .+.||..+.++ +..++-...... .+
T Consensus 90 ~~~~~~~~d~~~~~~~---~l~~---~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~ 161 (740)
T 4a5s_A 90 YTASYDIYDLNKRQLI---TEER---IPNNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNLPSYRITWTGKEDIIYNGIT 161 (740)
T ss_dssp EEEEEEEEETTTTEEC---CSSC---CCTTEEEEEECSSTTCEEEEE--TTEEEEESSTTSCCEECCSCCBTTTEEESBC
T ss_pred cceEEEEEECCCCcEE---Eccc---CCCcceeeEECCCCCEEEEEE--CCeEEEEECCCCceEEEcCCCCccceecCcc
Confidence 2356889999988754 2321 123456789999985 54442 36888888764 433322111100 00
Q ss_pred cc---ccCccccCeEEEccCc-eEEEEe
Q 020019 195 EW---YKNLVGLNGIVYHPDG-FLIVIH 218 (332)
Q Consensus 195 ~~---~~~~~~~nGi~~~~dG-~Lyva~ 218 (332)
.+ ...+....+++|+||| .|.++.
T Consensus 162 ~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 162 DWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp CHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred cccccchhcCCCcceEECCCCCEEEEEE
Confidence 00 0002334579999999 676654
No 273
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.60 E-value=0.00042 Score=59.22 Aligned_cols=110 Identities=14% Similarity=0.083 Sum_probs=66.9
Q ss_pred CCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEe
Q 020019 150 SCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKID 228 (332)
Q Consensus 150 ~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id 228 (332)
....+++++|+|.||.. ..+.+|++++. ++...+.....-... .+-.+-..+.++++|.||+. .+++|||++
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~---~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGN---GGWNQFQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEEC---SCGGGCSEEEECTTSCEEEE--ETTEEEEES
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecc---cccccceEEEECCCCCEEEe--CCCEEEEeC
Confidence 35569999999999998 67889999984 222222111000000 01112357899999999999 348999998
Q ss_pred CCCCCCc---cceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCC
Q 020019 229 IVDGVGE---GEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNP 269 (332)
Q Consensus 229 ~~~~~~~---~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~ 269 (332)
+.+.... . .-..|-- ..-..-.-+.++|+|.||.++..
T Consensus 114 pP~~~~~~Wl~-~a~~vg~--~gw~~~~~lff~p~G~Lyav~dg 154 (236)
T 1tl2_A 114 PPQSDTDNWIA-RATEVGS--GGWSGFKFLFFHPNGYLYAVHGQ 154 (236)
T ss_dssp CCCSTTCCHHH-HSEEEEC--SSGGGEEEEEECTTSCEEEEETT
T ss_pred CCcCCCCceec-cccEecc--CCCCceEEEEECCCceEEEEeCC
Confidence 7542110 0 0111211 11123367899999999999933
No 274
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.59 E-value=0.016 Score=52.62 Aligned_cols=62 Identities=10% Similarity=0.043 Sum_probs=43.8
Q ss_pred cccCeEEEccCceEEEEeCCCCe-EEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 201 VGLNGIVYHPDGFLIVIHTFSGN-LFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 201 ~~~nGi~~~~dG~Lyva~~~~~~-i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
...+.++|+|||.+.++-...++ |..+|+.+++ .+..+.. |........+++.++|+++++.
T Consensus 196 ~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~----~~~~~~~-g~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 196 NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV----LVREFRR-GLDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp SCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC----EEEEEEC-TTCCSCEEEEEECTTSCEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc----EEEEEEc-CCCCCcEEEEEECCCCCEEEEE
Confidence 34688999999966666677787 8888988762 4554542 1122456789999999887775
No 275
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.59 E-value=0.051 Score=54.18 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=69.3
Q ss_pred CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCC---------CccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 55 SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTG---------NGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 55 ~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
+|.+|+++ ..+.|+.+|..+++. .|..++.... ....+++++. +++|+... .+.
T Consensus 66 ~g~vyv~~-~~~~v~AlD~~tG~~--------~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~v~~~------dg~ 128 (668)
T 1kv9_A 66 DGVIYTSM-SWSRVIAVDAASGKE--------LWRYDPEVAKVKARTSCCDAVNRGVALWG--DKVYVGTL------DGR 128 (668)
T ss_dssp TTEEEEEE-GGGEEEEEETTTCCE--------EEEECCCCCGGGGGGCTTCSCCCCCEEEB--TEEEEECT------TSE
T ss_pred CCEEEEEC-CCCeEEEEECCCChh--------ceEECCCCCccccccccccCCccceEEEC--CEEEEEcC------CCE
Confidence 45666655 368899999988872 3443222110 0124567764 79999864 357
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC-----CCeEEEEcCC-CceE
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT-----GSKIWKVGVK-GEFL 183 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~-----~~~I~~v~~~-g~~~ 183 (332)
|+.+|.++|++.+..+...+..........++. +|.+|+.... .+.|+.+|.. |+..
T Consensus 129 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 129 LIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp EEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEEEECCCCCEeeeeccCCCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 999999999999887763221111122223343 5678987654 5889999975 7754
No 276
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.57 E-value=0.0021 Score=64.24 Aligned_cols=156 Identities=12% Similarity=0.076 Sum_probs=87.5
Q ss_pred ccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCe-EEEEEeCcC---CCc
Q 020019 47 RECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNR-LLVVAADVF---GNK 122 (332)
Q Consensus 47 pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~-l~v~~~~~~---~~~ 122 (332)
+.+++|.++|++++ ...++.|+.++..+++. . .+.............++++|+ |+ |.++..... ...
T Consensus 18 ~~~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~-----~--~~~~~~~~~~~~~~~~~~SpD-g~~la~~~~~~~~~~~s~ 88 (719)
T 1z68_A 18 TFFPNWISGQEYLH-QSADNNIVLYNIETGQS-----Y--TILSNRTMKSVNASNYGLSPD-RQFVYLESDYSKLWRYSY 88 (719)
T ss_dssp CCCCEESSSSEEEE-ECTTSCEEEEESSSCCE-----E--EEECHHHHHTTTCSEEEECTT-SSEEEEEEEEEECSSSCE
T ss_pred CCccEECCCCeEEE-EcCCCCEEEEEcCCCcE-----E--EEEccccccccceeeEEECCC-CCeEEEEecCceeEEeec
Confidence 34789999996444 43578999999987762 1 333211110012578899997 65 444432100 011
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCC-CceEEEecCCCCC-----Ccc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVK-GEFLSIISSPLFT-----PKE 195 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~-----~p~ 195 (332)
.+.+++||.++++......+. .....+++.|||+ |.++. .+.|+..+.+ |+..++....... .+.
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l~------~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~ 160 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNELP------RPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPFQITFNGRENKIFNGIPD 160 (719)
T ss_dssp EEEEEEEETTTTEECCSSCCC------SSBCCEEECSSTTCEEEEE--TTEEEEESSTTSCCEECCCCCBTTTEEESSCC
T ss_pred ceEEEEEECCCCccccceecC------cccccceECCCCCEEEEEE--CCeEEEEeCCCCCcEEEecCCCcCCeEccccc
Confidence 357999999988752111221 2356799999996 54443 4689999876 4443332111000 000
Q ss_pred c---ccCccccCeEEEccCc-eEEEEeC
Q 020019 196 W---YKNLVGLNGIVYHPDG-FLIVIHT 219 (332)
Q Consensus 196 ~---~~~~~~~nGi~~~~dG-~Lyva~~ 219 (332)
+ .+.+....+++|+||| .|+++..
T Consensus 161 ~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 161 WVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp HHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred ceeeeecccCcccEEECCCCCEEEEEEE
Confidence 0 0001123589999999 7776653
No 277
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.57 E-value=0.0067 Score=54.13 Aligned_cols=118 Identities=14% Similarity=0.064 Sum_probs=74.2
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCC-CCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHP-RNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~-~g~l~v~~~~~~~~~~~ 124 (332)
....++++++|+++++...++.|..++..+++. ....++.... .....+++.++ +++++++... .+
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~----~~~~~l~gH~----~~V~~v~~~~~~~~~~l~s~s~-----D~ 81 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ----ILIADLRGHE----GPVWQVAWAHPMYGNILASCSY-----DR 81 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEE----EEEEEEECCS----SCEEEEEECCGGGSSCEEEEET-----TS
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc----EEEEEEcCCC----ccEEEEEeCCCCCCCEEEEEEC-----CC
Confidence 446789999999888877789998888765431 0000222111 25678888642 2444444332 35
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC--CcEEEEeCCCCeEEEEcCC
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE--GNAYVTDVTGSKIWKVGVK 179 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d--G~lyvtd~~~~~I~~v~~~ 179 (332)
.+..||.++++......+.+ .....+.+++.|+ |.++++-+..+.|..++..
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~---h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~ 135 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAG---HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYT 135 (316)
T ss_dssp CEEEECCSSSCCCEEEEECC---CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEEC
T ss_pred EEEEEECCCCcceEEEEccC---CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecC
Confidence 68899998875333334421 1246788999997 7788887777877776654
No 278
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.54 E-value=0.02 Score=57.33 Aligned_cols=80 Identities=9% Similarity=-0.049 Sum_probs=48.0
Q ss_pred CeEEEEcCC-CceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCC
Q 020019 171 SKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPL 249 (332)
Q Consensus 171 ~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~ 249 (332)
+.|..+|+. |+..-..... . | ...|.....+|.+|++ +.++.|+.+|.++++ .+-.+.++....
T Consensus 455 g~l~A~D~~tG~~~W~~~~~-~--~-------~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~----~lw~~~~~~~~~ 519 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYV-T--I-------FNGGTLSTAGNLVFEG-SADGRVIAYAADTGE----KLWEQPAASGVM 519 (689)
T ss_dssp EEEEEEETTTTEEEEEEEES-S--S-------CCCCEEEETTTEEEEE-CTTSEEEEEETTTCC----EEEEEECSSCCC
T ss_pred eeEEEEECCCCCeEeEccCC-C--C-------ccCccceECCCEEEEE-CCCCcEEEEECCCCc----cceeeeCCCCcc
Confidence 567888876 5543222111 0 0 1123333344588887 567899999999883 555566552222
Q ss_pred CCCCeEEEeCCCeEEEEe
Q 020019 250 SFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 250 ~~pdGi~~~~dG~l~va~ 267 (332)
..| |.+..+|+.||+-
T Consensus 520 ~~p--~ty~~~G~qyv~~ 535 (689)
T 1yiq_A 520 AAP--VTYSVDGEQYVTF 535 (689)
T ss_dssp SCC--EEEEETTEEEEEE
T ss_pred cCc--eEEEECCEEEEEE
Confidence 344 7777889999984
No 279
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.51 E-value=0.041 Score=49.04 Aligned_cols=147 Identities=10% Similarity=0.056 Sum_probs=86.3
Q ss_pred ccceEEcCCCCEEE-EEecC----CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCc---
Q 020019 47 RECAKWDDSGRRFI-VSFLD----GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADV--- 118 (332)
Q Consensus 47 pegia~d~~g~~~~-~~~~~----g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~--- 118 (332)
...++|+|||+.++ ++... ..|+.++..+++. . .+...+ . ...+++.|+...|+++..+.
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~-----~--~l~~~~----~-~~~~~wspdg~~l~~~~~~~~~~ 128 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSS-----K--KILEAK----N-IRSLEWNEDSRKLLIVGFKRRED 128 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEE-----E--EEEEES----E-EEEEEECTTSSEEEEEEECCCC-
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCce-----E--EEEcCC----C-ccceeECCCCCEEEEEEccCCCc
Confidence 45689999998554 44322 3599999876652 1 232211 1 56788888744566654320
Q ss_pred --------------C----CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC---------CC
Q 020019 119 --------------F----GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT---------GS 171 (332)
Q Consensus 119 --------------~----~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~---------~~ 171 (332)
+ ......|+++|+++++....+..+ ....+++.||| ++++... ..
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-------~~~~~~~spdg-~~~~~~~~~~~~~~~~~~ 200 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-------RFSSGIWHRDK-IVVNVPHREIIPQYFKFW 200 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEEEEEEEE-------TTCEEEEETTE-EEEEEECCCSSCCSSCCE
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-------CcccccCCCCe-EEEEEecccccccccccc
Confidence 0 001357899999888762222211 34568899999 7665422 34
Q ss_pred eEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCC-------CCeEEEEe
Q 020019 172 KIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTF-------SGNLFKID 228 (332)
Q Consensus 172 ~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~-------~~~i~~id 228 (332)
.||.++ .|+...+... . .-..++||| .|++.... ..+|+.++
T Consensus 201 ~l~~~d-~~~~~~l~~~--~------------~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 201 DIYIWE-DGKEEKMFEK--V------------SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEEEE-TTEEEEEEEE--E------------SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred cEEEeC-CCceEEeccC--c------------ceeeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 799998 6665443321 1 011238999 67665533 35799998
No 280
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.50 E-value=0.021 Score=56.92 Aligned_cols=158 Identities=9% Similarity=-0.021 Sum_probs=85.6
Q ss_pred CCCCEE-EEEec----CCeEEEEECCCCCCCccceeeeEEecccCcC--C-CccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 54 DSGRRF-IVSFL----DGGIGQVAVPDDYPPGTVLEEVTLVKDLELT--G-NGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 54 ~~g~~~-~~~~~----~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
++|+.+ |+... .+.|++.+..+++. + .+.....+. + ....++.+.|+ |+..+...+..+.....
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~--~l~d~~~~a~~~~~~~~~~~~SPD-G~~la~~~~~~G~~~~~ 148 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQE-----K--VLLDPNGWSKDGTVSLGTWAVSWD-GKKVAFAQKPNAADEAV 148 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCC-----E--EEECGGGSSSSSCEEEEEEEECTT-SSEEEEEEEETTCSCCE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCc-----E--EEEchHHhccCCCEEEEEEEECCC-CCEEEEEECCCCCceEE
Confidence 556644 44432 25689998765542 2 344211211 1 13568899997 66333222211112357
Q ss_pred EEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCC------------CCeEEEEcCCCce---EEEecCC
Q 020019 126 VAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVT------------GSKIWKVGVKGEF---LSIISSP 189 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~------------~~~I~~v~~~g~~---~~~~~~~ 189 (332)
|+++|+++|+......+. .....++++.|||+ |+++... ...|++++.++.. ..+...+
T Consensus 149 i~v~dl~tg~~~~~~~~~-----~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~ 223 (695)
T 2bkl_A 149 LHVIDVDSGEWSKVDVIE-----GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT 223 (695)
T ss_dssp EEEEETTTCCBCSSCCBS-----CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC
T ss_pred EEEEECCCCCCcCCcccC-----cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC
Confidence 999999998753111121 11226799999996 5555432 2348888876321 2222211
Q ss_pred CCCCcccccCccccCeEEEccCc-eEEEEeCC---CCeEEEEeCCCC
Q 020019 190 LFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTF---SGNLFKIDIVDG 232 (332)
Q Consensus 190 ~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~---~~~i~~id~~~~ 232 (332)
. ......++.+++|| .|+++... +..||.++..++
T Consensus 224 ~--------~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~ 262 (695)
T 2bkl_A 224 G--------DPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK 262 (695)
T ss_dssp C--------CTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS
T ss_pred C--------CCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC
Confidence 0 01223588999999 77665543 347888866544
No 281
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.49 E-value=0.044 Score=47.96 Aligned_cols=128 Identities=12% Similarity=-0.035 Sum_probs=76.9
Q ss_pred CccccceEEcCC--CCEEEEEecCCeEEEEECCCCCCCccceeeeEEe--c-ccCcCCCccceEEEeCC--CCeEEEEEe
Q 020019 44 SFFRECAKWDDS--GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLV--K-DLELTGNGSLGLVLDHP--RNRLLVVAA 116 (332)
Q Consensus 44 ~~~pegia~d~~--g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~gi~vd~~--~g~l~v~~~ 116 (332)
......++++++ ++.+++...++.|..+|..+++............ . .+.........+.+.++ ++.++++..
T Consensus 110 ~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~ 189 (351)
T 3f3f_A 110 KGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA 189 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE
T ss_pred CCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec
Confidence 335577999999 8888877778999999987665311000000000 0 01111125678888875 244444433
Q ss_pred CcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCC----cEEEEeCCCCeEEEEcCC
Q 020019 117 DVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEG----NAYVTDVTGSKIWKVGVK 179 (332)
Q Consensus 117 ~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG----~lyvtd~~~~~I~~v~~~ 179 (332)
. .+.+..++...++......+.+ .....+.+++.|+| +++++-...+.|..++..
T Consensus 190 ~-----~~~~~~~~~~~~~~~~~~~~~~---h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 190 L-----EQAIIYQRGKDGKLHVAAKLPG---HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp T-----TEEEEEEECTTSCEEEEEECCC---CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred C-----CCcEEEEccCCCceeeeeecCC---CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 2 3456666777666654455532 13467889999998 788887777877776654
No 282
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.48 E-value=0.048 Score=53.51 Aligned_cols=81 Identities=10% Similarity=0.052 Sum_probs=47.5
Q ss_pred CCeEEEEcCC-CceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCC
Q 020019 170 GSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGP 248 (332)
Q Consensus 170 ~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~ 248 (332)
.+.|+.+|+. |+..-..... . | ...|.....+|.+|++. ..+.|+.+|.++++ .+-.+.++...
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~-~--~-------~~~g~~~tagglvf~g~-~dg~l~A~D~~tG~----~lW~~~~~~g~ 529 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH-L--P-------LWAGVLATAGNLVFTGT-GDGYFKAFDAKSGK----ELWKFQTGSGI 529 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES-S--C-------CCSCCEEETTTEEEEEC-TTSEEEEEETTTCC----EEEEEECSSCC
T ss_pred cceEEEEECCCCCEEEEecCC-C--C-------CcccceEeCCCEEEEEC-CCCcEEEEECCCCC----EEEEecCCCCc
Confidence 4678888875 6643212111 0 1 11122233466888865 57889999999883 45555554212
Q ss_pred CCCCCeEEEeCCCeEEEEe
Q 020019 249 LSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 249 ~~~pdGi~~~~dG~l~va~ 267 (332)
...| |.+..+|++||+.
T Consensus 530 ~a~P--~~y~~~G~qYv~~ 546 (582)
T 1flg_A 530 VSPP--ITWEQDGEQYLGV 546 (582)
T ss_dssp CSCC--EEEEETTEEEEEE
T ss_pred ccCc--eEEEECCEEEEEE
Confidence 2333 6777889999984
No 283
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.43 E-value=0.073 Score=49.17 Aligned_cols=155 Identities=13% Similarity=0.167 Sum_probs=97.4
Q ss_pred ccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 45 FFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 45 ~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
+|..-++|+++ +++.+.+ ++.|+.+|..+++. .+ .+...+ ....+..+++.++ |+++++... .+
T Consensus 106 ~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~----~~---~~~~~~-~~~~V~sv~fspd-g~~lasgs~-----Dg 169 (420)
T 4gga_A 106 YYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDI----LQ---LLQMEQ-PGEYISSVAWIKE-GNYLAVGTS-----SA 169 (420)
T ss_dssp TTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCE----EE---EEECCS-TTCCEEEEEECTT-SSEEEEEET-----TS
T ss_pred ccceeEEECCC-CEEEEEe-CCEEEEEECCCCCE----EE---EEEecC-CCCcEEEEEECCC-CCEEEEEEC-----CC
Confidence 46677899875 5555555 79999999988762 22 222111 1125789999997 665544332 45
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCc--eEEEecCCCCCCcccccCccc
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGE--FLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~--~~~~~~~~~~~~p~~~~~~~~ 202 (332)
.|.+||.++++......- . ..... ++..++.+.++-+..+.+...+.... ....+.. ....
T Consensus 170 ~v~iWd~~~~~~~~~~~~--h---~~~v~--~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~----------h~~~ 232 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMTS--H---SARVG--SLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSG----------HSQE 232 (420)
T ss_dssp CEEEEETTTTEEEEEECC--C---SSCEE--EEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC----------CSSC
T ss_pred eEEEEEcCCCcEEEEEeC--C---CCceE--EEeeCCCEEEEEeCCCceeEeeecccceeeEEecc----------cccc
Confidence 689999999887654322 1 12333 34445678888878888888775532 2222211 1123
Q ss_pred cCeEEEccCceEEEEeCCCCeEEEEeCCCC
Q 020019 203 LNGIVYHPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 203 ~nGi~~~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
..++.+.++|...++-...+.+..++..++
T Consensus 233 ~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 233 VCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred eeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 568999999955556666778888887765
No 284
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.036 Score=54.13 Aligned_cols=186 Identities=12% Similarity=0.131 Sum_probs=115.5
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEec-ccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVK-DLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
+..+++|+|+|..+.+...+|.|..++.++ . +. ... ...........++++|+...|+++.. .+
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~-----l~---~l~~~~~~~~~sv~svafSPDG~~LAsgs~------DG 151 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-M-----LT---NLDSKGNLSSRTYHCFEWNPIESSIVVGNE------DG 151 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETTE-E-----EE---ECCCSSCSTTTCEEEEEECSSSSCEEEEET------TS
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCCc-e-----ee---eccCCCccccccEEEEEEcCCCCEEEEEcC------CC
Confidence 567899999999887777889999998432 1 11 221 11011235789999998334444443 46
Q ss_pred eEEEEECCCCcE-------EEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceE----EEecCCCCCC
Q 020019 125 AVAAYDLSTWNR-------LFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFL----SIISSPLFTP 193 (332)
Q Consensus 125 ~l~~~d~~~g~~-------~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~----~~~~~~~~~~ 193 (332)
.|..||.+++.. ...+.....+ .......+++.||| +++-+..+.|+..+.++... ..+...
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~g-h~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~---- 224 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAG-SKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNA---- 224 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTT-CCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECC----
T ss_pred EEEEEECCCCccccccceeeeeeeccccc-ccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeeccc----
Confidence 789999988752 2333321111 12467789999999 56666778888888775431 112100
Q ss_pred cccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEE--eCCCeEEEEeC
Q 020019 194 KEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLEL--LSPTKLVVAGN 268 (332)
Q Consensus 194 p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~--~~dG~l~va~~ 268 (332)
.......++|+ +..|..+. .++|..++..++ ....... | ......+|++ .+||..+++..
T Consensus 225 -----h~~~V~svaFs-g~~LASa~--~~tIkLWd~~~~-----~~~~~~~-g-h~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 225 -----SRRKITDLKIV-DYKVVLTC--PGYVHKIDLKNY-----SISSLKT-G-SLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp -----CSSCCCCEEEE-TTEEEEEC--SSEEEEEETTTT-----EEEEEEC-S-CCSCCCEEEETTCSSCEEEEECS
T ss_pred -----ccCcEEEEEEE-CCEEEEEe--CCeEEEEECCCC-----eEEEEEc-C-CCceEEEEEeeeCCCCCEEEEEc
Confidence 11346789998 44666663 478999998866 3333433 2 3355678888 88886666643
No 285
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.41 E-value=0.029 Score=49.35 Aligned_cols=196 Identities=7% Similarity=-0.035 Sum_probs=106.7
Q ss_pred ccceEEcC--CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCC-CeEEEEEeCcCCCcc
Q 020019 47 RECAKWDD--SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPR-NRLLVVAADVFGNKY 123 (332)
Q Consensus 47 pegia~d~--~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~-g~l~v~~~~~~~~~~ 123 (332)
...++|.+ +|+++++...++.|..++..+++.. . ....... ......+++.++. +.++++... .
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~----~-~~~~~~h---~~~v~~v~~~p~~~g~~l~s~s~-----d 122 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS----Q-IAVHAVH---SASVNSVQWAPHEYGPMLLVASS-----D 122 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC----C-CEEECCC---SSCEEEEEECCGGGCSEEEEEET-----T
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE----E-EEEeecC---CCceeEEEeCcCCCCcEEEEEEC-----C
Confidence 35678865 3787777778899999998765420 1 0111110 1256789998852 444444332 3
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCC-------------CcEEEEeCCCCeEEEEcCC-Cc-eEEEecC
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAE-------------GNAYVTDVTGSKIWKVGVK-GE-FLSIISS 188 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~d-------------G~lyvtd~~~~~I~~v~~~-g~-~~~~~~~ 188 (332)
+.+..||.+++.......+.+. ....+.+++.|+ ++.+++-+..+.|...+.. ++ ......
T Consensus 123 ~~v~~wd~~~~~~~~~~~~~~h---~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~- 198 (297)
T 2pm7_B 123 GKVSVVEFKENGTTSPIIIDAH---AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES- 198 (297)
T ss_dssp SEEEEEEBCSSSCBCCEEEECC---SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEE-
T ss_pred CcEEEEEecCCCceeeeeeecc---cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEE-
Confidence 5688899876532111112111 234556777775 4577777777776666543 22 111100
Q ss_pred CCCCCcccccCccccCeEEEccCc---eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEE
Q 020019 189 PLFTPKEWYKNLVGLNGIVYHPDG---FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVV 265 (332)
Q Consensus 189 ~~~~~p~~~~~~~~~nGi~~~~dG---~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~v 265 (332)
.+. ......+.++|+|++ .++++-...++|..++++.+.. ..................+++.++|++++
T Consensus 199 -~l~-----~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~--~~~~~~~~~~~~~~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 199 -TLE-----GHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG--PWKKTLLKEEKFPDVLWRASWSLSGNVLA 270 (297)
T ss_dssp -EEC-----CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS--CCEEEESSSSCCSSCEEEEEECSSSCCEE
T ss_pred -Eec-----CCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC--ccceeeeecccCCCcEEEEEECCCCCEEE
Confidence 010 011235789999984 6666666777787777664311 01111111001113345788999998777
Q ss_pred Ee
Q 020019 266 AG 267 (332)
Q Consensus 266 a~ 267 (332)
+.
T Consensus 271 s~ 272 (297)
T 2pm7_B 271 LS 272 (297)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 286
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.37 E-value=0.0027 Score=62.31 Aligned_cols=115 Identities=16% Similarity=0.232 Sum_probs=76.8
Q ss_pred ccceEEEeCCCCeEEEEEeCcCC----------------CccceEEEEECCCCc-----EEEEEec-CC-CC--------
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFG----------------NKYSAVAAYDLSTWN-----RLFLTQL-SG-PS-------- 146 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~----------------~~~~~l~~~d~~~g~-----~~~~~~l-~~-~~-------- 146 (332)
.|.++.+++.++.+|++...... +..+.|++|+++.+. ..+.+-+ .+ |.
T Consensus 385 RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~~ 464 (592)
T 3zwu_A 385 RPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp CEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred ccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccccc
Confidence 47899999877999999764221 234679999865432 2221111 10 10
Q ss_pred --------CCCCCccceEECCCCcEEEEeC------------CCCeEEEEcCC-CceEEEecCCCCCCcccccCccccCe
Q 020019 147 --------DGKSCADDVTVDAEGNAYVTDV------------TGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNG 205 (332)
Q Consensus 147 --------~~~~~~ndiavd~dG~lyvtd~------------~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nG 205 (332)
.....|..|++|++|+|||.+- .++.++..+++ |++.+++..+. ..-..|
T Consensus 465 ~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~---------gaE~TG 535 (592)
T 3zwu_A 465 GSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI---------GCEVTG 535 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT---------TCEEEE
T ss_pred cccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC---------CccCcC
Confidence 1135789999999999998643 24678888876 78877775442 234679
Q ss_pred EEEccCc-eEEEEeCCC
Q 020019 206 IVYHPDG-FLIVIHTFS 221 (332)
Q Consensus 206 i~~~~dG-~Lyva~~~~ 221 (332)
++|+||| +|||+-+.-
T Consensus 536 ~~fspDg~tlfvniQHP 552 (592)
T 3zwu_A 536 ISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp EEECTTSSEEEEEEEST
T ss_pred eeECCCCCEEEEEEECC
Confidence 9999999 999875543
No 287
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.37 E-value=0.093 Score=52.34 Aligned_cols=155 Identities=10% Similarity=0.096 Sum_probs=86.4
Q ss_pred CCCCEEE-EEec----CCeEEEEECCCCCCCccceeeeEEecccCcC--CC-ccceEEEeCCCCe-EEEEEeCcCCCccc
Q 020019 54 DSGRRFI-VSFL----DGGIGQVAVPDDYPPGTVLEEVTLVKDLELT--GN-GSLGLVLDHPRNR-LLVVAADVFGNKYS 124 (332)
Q Consensus 54 ~~g~~~~-~~~~----~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~gi~vd~~~g~-l~v~~~~~~~~~~~ 124 (332)
++|+.++ .... .+.|++++..+++. + .++....+. +. ...++++.|+ |+ |.++....+ ....
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~--~lld~~~l~~~~~~~~~~~~~SPD-g~~la~~~~~~G-~~~~ 151 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEA-----R--VFLDPNILSDDGTVALRGYAFSED-GEYFAYGLSASG-SDWV 151 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCC-----E--EEECGGGGCTTSCEEEEEEEECTT-SSEEEEEEEETT-CSCE
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCc-----E--EEECHHHhccCCCEEEEEEEECCC-CCEEEEEEcCCC-CceE
Confidence 6676544 3322 23689988665542 2 333211111 11 3567899997 65 333332211 1223
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCC---------------CCeEEEEcCCCce---EEE
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVT---------------GSKIWKVGVKGEF---LSI 185 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~---------------~~~I~~v~~~g~~---~~~ 185 (332)
.|+++|+++|+.... .+. .....++++.|||+ ||++... ...|++++..+.. ..+
T Consensus 152 ~i~v~d~~tg~~~~~-~~~-----~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v 225 (710)
T 2xdw_A 152 TIKFMKVDGAKELPD-VLE-----RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILC 225 (710)
T ss_dssp EEEEEETTTTEEEEE-EEE-----EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEE
T ss_pred EEEEEECCCCCCCcc-ccc-----CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEE
Confidence 799999999887543 221 11245799999986 6665432 2348888765321 222
Q ss_pred ecCCCCCCcccccCccccCeEEEccCc-eEEEEeC-C---CCeEEEEeCCC
Q 020019 186 ISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHT-F---SGNLFKIDIVD 231 (332)
Q Consensus 186 ~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~-~---~~~i~~id~~~ 231 (332)
..... ......+++++||| +|+++.. . .+.|+.+++++
T Consensus 226 ~~~~~--------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 226 AEFPD--------EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp ECCTT--------CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred eccCC--------CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 22110 01123588999999 7776654 2 56899999876
No 288
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.34 E-value=0.09 Score=51.75 Aligned_cols=51 Identities=14% Similarity=0.148 Sum_probs=34.8
Q ss_pred cCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 210 PDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 210 ~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
.+|.+|++. ..+.|+.+|.++++ .+-..+++......| |.+..+|++||+.
T Consensus 483 agg~vf~gt-~dg~l~A~D~~tG~----~lW~~~l~~g~~~~P--~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 483 AGDLVFYGT-LDGYLKARDSDTGD----LLWKFKIPSGAIGYP--MTYTHKGTQYVAI 533 (599)
T ss_dssp TTTEEEEEC-TTSEEEEEETTTCC----EEEEEECSSCCCSCC--EEEEETTEEEEEE
T ss_pred cCCEEEEEC-CCCeEEEEECCCCC----EEEEeeCCCCcEecc--EEEEeCCEEEEEE
Confidence 456888864 57889999999883 455555552223344 6666789999885
No 289
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.30 E-value=0.0026 Score=62.36 Aligned_cols=111 Identities=16% Similarity=0.206 Sum_probs=71.6
Q ss_pred CCccceEECC-CCcEEEEeCC---------------------CCeEEEEcCCCc-----eEE---E--ecCCCCCC--cc
Q 020019 150 SCADDVTVDA-EGNAYVTDVT---------------------GSKIWKVGVKGE-----FLS---I--ISSPLFTP--KE 195 (332)
Q Consensus 150 ~~~ndiavd~-dG~lyvtd~~---------------------~~~I~~v~~~g~-----~~~---~--~~~~~~~~--p~ 195 (332)
.+|-|+.++| +|.+|++.+. .|+|+++++++. ... + ..++.... +.
T Consensus 384 ~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~ 463 (592)
T 3zwu_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred eccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccccc
Confidence 5788999998 5899998652 378999986521 111 1 11111100 00
Q ss_pred -------cccCccccCeEEEccCceEEEEeCC------------CCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEE
Q 020019 196 -------WYKNLVGLNGIVYHPDGFLIVIHTF------------SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLE 256 (332)
Q Consensus 196 -------~~~~~~~~nGi~~~~dG~Lyva~~~------------~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~ 256 (332)
....+..|++|+|+++|.|||++-. ++.++.+++.++ .++.+... ..-....|++
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g-----~~~rf~~~-P~gaE~TG~~ 537 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG-----EIRRFMVG-PIGCEVTGIS 537 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTC-----CEEEEEEC-CTTCEEEEEE
T ss_pred ccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCC-----eEEEEEeC-CCCccCcCee
Confidence 0123668999999999999998764 356788888777 45555432 1224577999
Q ss_pred EeCCCe-EEEE
Q 020019 257 LLSPTK-LVVA 266 (332)
Q Consensus 257 ~~~dG~-l~va 266 (332)
+.+||+ |||.
T Consensus 538 fspDg~tlfvn 548 (592)
T 3zwu_A 538 FSPDQKTLFVG 548 (592)
T ss_dssp ECTTSSEEEEE
T ss_pred ECCCCCEEEEE
Confidence 999965 7776
No 290
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.25 E-value=0.078 Score=52.80 Aligned_cols=192 Identities=8% Similarity=-0.010 Sum_probs=103.8
Q ss_pred ccceEEcCCCCEEEEE-ecC----CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCC-
Q 020019 47 RECAKWDDSGRRFIVS-FLD----GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG- 120 (332)
Q Consensus 47 pegia~d~~g~~~~~~-~~~----g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~- 120 (332)
..+++++|||+.+... ... ..|+.++..+++. .... ...+....+++..++...|+.+..+...
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~---------~~~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEW---------SKVD-VIEGGKYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCB---------CSSC-CBSCCTTCCCEECTTSSEEEEEECCCCTT
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCC---------cCCc-ccCcccccceEEecCCCEEEEEEecCCCC
Confidence 4578999999966533 223 4799999987762 1000 0111112578899973345555443210
Q ss_pred ------CccceEEEEECCCCcE--EEEEecCCCCCCCCCccceEECCCCc-EEEEeC---CCCeEEEEcCC-CceEEEec
Q 020019 121 ------NKYSAVAAYDLSTWNR--LFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDV---TGSKIWKVGVK-GEFLSIIS 187 (332)
Q Consensus 121 ------~~~~~l~~~d~~~g~~--~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~---~~~~I~~v~~~-g~~~~~~~ 187 (332)
.....|+++++.+++. ....... .......++++++||+ |+++.. ....||.++.. ++...+..
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~---~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 269 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERT---GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK 269 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCC---CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecC---CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec
Confidence 1234699999987762 2222221 1123456789999996 554432 23478888764 44444332
Q ss_pred CCCCCCcccccCccccCeEEEccCceEEEEeC---CCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEE
Q 020019 188 SPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHT---FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLV 264 (332)
Q Consensus 188 ~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~---~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~ 264 (332)
.. .......+ ++|.+|+... .+++|++++++++.. ...+.+... .+-....++++. ++.|+
T Consensus 270 ~~-----------~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~~l~~~-~~~~~l~~~~~~-~~~lv 333 (695)
T 2bkl_A 270 GV-----------GAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPAR--ASWKEIVPE-DSSASLLSVSIV-GGHLS 333 (695)
T ss_dssp CS-----------SCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSG--GGCEEEECC-CSSCEEEEEEEE-TTEEE
T ss_pred CC-----------CceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCc--cCCeEEecC-CCCCeEEEEEEE-CCEEE
Confidence 11 11123344 4554666544 357899999986521 012323222 111234567777 67777
Q ss_pred EEe
Q 020019 265 VAG 267 (332)
Q Consensus 265 va~ 267 (332)
++.
T Consensus 334 ~~~ 336 (695)
T 2bkl_A 334 LEY 336 (695)
T ss_dssp EEE
T ss_pred EEE
Confidence 774
No 291
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.16 E-value=0.15 Score=47.20 Aligned_cols=182 Identities=14% Similarity=0.117 Sum_probs=105.5
Q ss_pred EcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEEC
Q 020019 52 WDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDL 131 (332)
Q Consensus 52 ~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~ 131 (332)
+..+|+.+++...+|.|..++..+++. .. .+.... .....+.+++ +.++.+.. .+.+..||.
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~----~~--~~~~h~----~~v~~~~~~~--~~l~s~~~------dg~i~vwd~ 186 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVTGKC----LR--TLVGHT----GGVWSSQMRD--NIIISGST------DRTLKVWNA 186 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCE----EE--ECCCCS----SCEEEEEEET--TEEEEEET------TSCEEEEET
T ss_pred EEEcCCEEEEEECCCcEEEEECCCCcE----EE--EEcCCC----CCEEEEEecC--CEEEEEeC------CCeEEEEEC
Confidence 445678888777789999999877652 11 221111 2567788874 55555554 356899999
Q ss_pred CCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccCeEEEcc
Q 020019 132 STWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHP 210 (332)
Q Consensus 132 ~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~ 210 (332)
++++......- . ......++++ ++.+++-+..+.|..++.. ++....+... ......+.+
T Consensus 187 ~~~~~~~~~~~--h---~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~----------~~~v~~~~~-- 247 (445)
T 2ovr_B 187 ETGECIHTLYG--H---TSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGH----------VAAVRCVQY-- 247 (445)
T ss_dssp TTTEEEEEECC--C---SSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECC----------SSCEEEEEE--
T ss_pred CcCcEEEEECC--C---CCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCC----------cccEEEEEE--
Confidence 98876654331 1 2345566664 4567777778888888865 4444333211 122356666
Q ss_pred CceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEE-eC-CceEEEEcCCC
Q 020019 211 DGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVA-GN-PSARLVESSDG 279 (332)
Q Consensus 211 dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va-~~-~~~~~v~~~dg 279 (332)
+|..+++-...+.|..+++.++ +.+..+.. .......+.+ +++.+++ .. +..++....++
T Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~---~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 248 DGRRVVSGAYDFMVKVWDPETE----TCLHTLQG---HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 309 (445)
T ss_dssp CSSCEEEEETTSCEEEEEGGGT----EEEEEECC---CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC
T ss_pred CCCEEEEEcCCCEEEEEECCCC----cEeEEecC---CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC
Confidence 5634444456778988998866 23433331 2233445666 4444444 43 33444455555
No 292
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.15 E-value=0.078 Score=48.71 Aligned_cols=201 Identities=11% Similarity=-0.005 Sum_probs=105.3
Q ss_pred cccceEEcC--------CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeC
Q 020019 46 FRECAKWDD--------SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAAD 117 (332)
Q Consensus 46 ~pegia~d~--------~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~ 117 (332)
....++|.| +|+++.+...+++|..+|..++.. ...+.... ..+..++++|++.+++++..
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~------~~~~~~~~----~~v~~v~~~p~~~~~l~~~~- 206 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP------ILAGYPLS----SPGISVQFRPSNPNQLIVGE- 206 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE------EEEEEECS----SCEEEEEEETTEEEEEEEEE-
T ss_pred ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce------eeeecCCC----CCcEEEEECCCCCceEEecC-
Confidence 345688876 777777777889999998765431 11222111 24678999996334444432
Q ss_pred cCCCccceEEEEECCCCcEEEEEec-CCC-------------------CCCCCCccceEEC-CCCcEEEEeCCCCeEEEE
Q 020019 118 VFGNKYSAVAAYDLSTWNRLFLTQL-SGP-------------------SDGKSCADDVTVD-AEGNAYVTDVTGSKIWKV 176 (332)
Q Consensus 118 ~~~~~~~~l~~~d~~~g~~~~~~~l-~~~-------------------~~~~~~~ndiavd-~dG~lyvtd~~~~~I~~v 176 (332)
..+.+..||.++++......- ... .........+++. ++|+..++-...+.+...
T Consensus 207 ----~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vw 282 (393)
T 4gq1_A 207 ----RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRW 282 (393)
T ss_dssp ----TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEE
T ss_pred ----CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEE
Confidence 245688999988764322110 000 0001223445554 678877777777777776
Q ss_pred cCC-CceEEEecC-------CCCCCcc-cccCccccCeEEEccC-c-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEec
Q 020019 177 GVK-GEFLSIISS-------PLFTPKE-WYKNLVGLNGIVYHPD-G-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVA 245 (332)
Q Consensus 177 ~~~-g~~~~~~~~-------~~~~~p~-~~~~~~~~nGi~~~~d-G-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~ 245 (332)
+.. ++....+.. ..+.... .........+.++.+. + .+.++-...++|..++..++. ........
T Consensus 283 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~----~~~~~~~~ 358 (393)
T 4gq1_A 283 NLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD----SNSIPIQL 358 (393)
T ss_dssp EC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT----CCEEEEEC
T ss_pred ECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc----EEEEecCC
Confidence 654 221111000 0000000 0111223344555554 3 555666778899999988763 22222211
Q ss_pred CCCCCCCCeEEEeCCCeEEEEeC
Q 020019 246 GGPLSFGDGLELLSPTKLVVAGN 268 (332)
Q Consensus 246 g~~~~~pdGi~~~~dG~l~va~~ 268 (332)
......+++.|||+++++..
T Consensus 359 ---~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 359 ---GMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp ---SSCEEEEEECTTSSEEEEEE
T ss_pred ---CCcEEEEEEcCCCCEEEEEe
Confidence 12356899999999777753
No 293
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.04 E-value=0.087 Score=46.69 Aligned_cols=195 Identities=8% Similarity=-0.038 Sum_probs=106.9
Q ss_pred cccceEEcC--CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCC-CeEEEEEeCcCCCc
Q 020019 46 FRECAKWDD--SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPR-NRLLVVAADVFGNK 122 (332)
Q Consensus 46 ~pegia~d~--~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~-g~l~v~~~~~~~~~ 122 (332)
....+++.+ +++++++...++.|..++..+++.. ....+.... ..+..++++|+. +.++++...
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~----~~~~~~~h~----~~V~~v~~~p~~~g~~lasgs~----- 125 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE----KSHEHAGHD----SSVNSVCWAPHDYGLILACGSS----- 125 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC----EEEEECCCS----SCCCEEEECCTTTCSCEEEECS-----
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce----EEEEccCCC----CceEEEEECCCCCCcEEEEEcC-----
Confidence 445678865 4787777777899999998765421 100121111 256889998852 554444332
Q ss_pred cceEEEEECCCCcEEE-EEecCCCCCCCCCccceEECCC-----------------CcEEEEeCCCCeEEEEcCC--Cce
Q 020019 123 YSAVAAYDLSTWNRLF-LTQLSGPSDGKSCADDVTVDAE-----------------GNAYVTDVTGSKIWKVGVK--GEF 182 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~-~~~l~~~~~~~~~~ndiavd~d-----------------G~lyvtd~~~~~I~~v~~~--g~~ 182 (332)
.+.+..||.+++.... ...+.+ .....+.+++.|+ ++.+++-+..+.|...+.. ++.
T Consensus 126 D~~i~lwd~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~ 202 (316)
T 3bg1_A 126 DGAISLLTYTGEGQWEVKKINNA---HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW 202 (316)
T ss_dssp SSCEEEEEECSSSCEEECCBTTS---SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE
T ss_pred CCCEEEEecCCCCCcceeeeecc---ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc
Confidence 3568889987653221 112211 1234556777765 3566666666655555443 221
Q ss_pred EEEecCCCCCCcccccCccccCeEEEccCc----eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEe
Q 020019 183 LSIISSPLFTPKEWYKNLVGLNGIVYHPDG----FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELL 258 (332)
Q Consensus 183 ~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG----~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~ 258 (332)
.... .+. ......+.++|+|++ .++++-...++|..+++++........+.+.. .......+++.
T Consensus 203 ~~~~---~l~-----~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~---~~~~v~~v~~s 271 (316)
T 3bg1_A 203 KEEQ---KLE-----AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHK---FNDVVWHVSWS 271 (316)
T ss_dssp EEEE---CCB-----CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEE---CSSCEEEEEEC
T ss_pred ceee---ecc-----cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhc---CCCcEEEEEEc
Confidence 1111 111 011235789999986 66777777888888887652100001111221 11345678899
Q ss_pred CCCeEEEEe
Q 020019 259 SPTKLVVAG 267 (332)
Q Consensus 259 ~dG~l~va~ 267 (332)
++|+++++.
T Consensus 272 p~g~~las~ 280 (316)
T 3bg1_A 272 ITANILAVS 280 (316)
T ss_dssp TTTCCEEEE
T ss_pred CCCCEEEEE
Confidence 998877664
No 294
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.04 E-value=0.16 Score=45.24 Aligned_cols=195 Identities=13% Similarity=0.108 Sum_probs=107.7
Q ss_pred ecCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCC
Q 020019 41 HSSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG 120 (332)
Q Consensus 41 ~~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~ 120 (332)
.+.......++++++ ++++...++.|..++..++.. .....+.. +.-......++++|+ +.++++...
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~-----~~~~~~~~-~~h~~~v~~v~~sp~-~~~las~s~--- 78 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF-----TLIDVLDE-TAHKKAIRSVAWRPH-TSLLAAGSF--- 78 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC-----EEEEEECT-TCCCSCEEEEEECTT-SSEEEEEET---
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe-----EEEEEEec-CCccCCEEEEEECCC-CCEEEEEeC---
Confidence 333334456778776 555557789999998765432 10112211 101125788999997 665554432
Q ss_pred CccceEEEEECCCCc-----EEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC--Cc---eEEEecCCC
Q 020019 121 NKYSAVAAYDLSTWN-----RLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK--GE---FLSIISSPL 190 (332)
Q Consensus 121 ~~~~~l~~~d~~~g~-----~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~--g~---~~~~~~~~~ 190 (332)
.+.+..||.+... ......+.+. ......+++.|+|+.+++-+..+.|...+.+ ++ ....+..
T Consensus 79 --D~~v~iw~~~~~~~~~~~~~~~~~~~~h---~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~-- 151 (330)
T 2hes_X 79 --DSTVSIWAKEESADRTFEMDLLAIIEGH---ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE-- 151 (330)
T ss_dssp --TSCEEEEEC-------CCCEEEEEEC-------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC--
T ss_pred --CCcEEEEEcccCcCccccceeEEEEcCC---CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc--
Confidence 3568889885321 1112223211 2456789999999988888888888877763 22 1221211
Q ss_pred CCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCC--CeEEEEe
Q 020019 191 FTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSP--TKLVVAG 267 (332)
Q Consensus 191 ~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~d--G~l~va~ 267 (332)
.....+.++|+|++.++++-...+.|..++..++.. +.+. .+.+ .......+++.++ +.++++.
T Consensus 152 --------h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~--~~~~--~~~~-h~~~v~~~~~~~~~~~~~l~s~ 217 (330)
T 2hes_X 152 --------HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW--ECVA--VLNG-HEGTVWSSDFDKTEGVFRLCSG 217 (330)
T ss_dssp --------CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE--EEEE--EECC-CSSCEEEEEECCSSSSCEEEEE
T ss_pred --------CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe--eEEE--EccC-CCCcEEEEEecCCCCeeEEEEE
Confidence 112357899999996666666677776666554310 1122 2221 2234567788877 5555553
No 295
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.00 E-value=0.014 Score=55.00 Aligned_cols=169 Identities=11% Similarity=0.043 Sum_probs=97.3
Q ss_pred cccceEEcCCCCEEEE---E-ecCCeEEEEECCCC-----CCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEe
Q 020019 46 FRECAKWDDSGRRFIV---S-FLDGGIGQVAVPDD-----YPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAA 116 (332)
Q Consensus 46 ~pegia~d~~g~~~~~---~-~~~g~I~~vd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~ 116 (332)
....++|+++|+.+++ + ..++.|..+|..+. +.. .... .+....+ -...+.+++++++.+.++++..
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~-~~~~--~~~~~~~-h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQK-RPFA--YHKLLKD-AGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSC-CCSE--EEECCCS-GGGSEEEEEECSSCTTEEEEEE
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCc-ceee--eeeccCC-CCCceEEEEECCCCCCEEEEEE
Confidence 4678999999998774 3 45678888886533 100 0001 1110000 0125789999996456555443
Q ss_pred CcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCccc
Q 020019 117 DVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEW 196 (332)
Q Consensus 117 ~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~ 196 (332)
. .+.|..||.++++..... . + .......+++.|+|+.+++-+..+.|..++.+++....+..+....+
T Consensus 170 ~-----Dg~v~iwD~~~~~~~~~~-~-~---~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~-- 237 (434)
T 2oit_A 170 A-----DGSIAVLQVTETVKVCAT-L-P---STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYES-- 237 (434)
T ss_dssp T-----TSCEEEEEESSSEEEEEE-E-C---GGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCT--
T ss_pred C-----CCeEEEEEcCCCcceeec-c-C---CCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCC--
Confidence 2 356899999887543221 1 0 12467889999999877776788999999988664443321110000
Q ss_pred ccCccccCeEEEccCc-eEEEEeCCCC------eEEEEeCCC
Q 020019 197 YKNLVGLNGIVYHPDG-FLIVIHTFSG------NLFKIDIVD 231 (332)
Q Consensus 197 ~~~~~~~nGi~~~~dG-~Lyva~~~~~------~i~~id~~~ 231 (332)
........|++++++ .+.+.....+ .+..+++..
T Consensus 238 -~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 238 -DHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp -TSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred -CCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 011245788999888 3333333332 255566653
No 296
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.00 E-value=0.17 Score=44.79 Aligned_cols=115 Identities=11% Similarity=0.081 Sum_probs=78.1
Q ss_pred ccceEEEeCCC--CeEEEEEeCcCCCccceEEEEECCC-CcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEE
Q 020019 98 GSLGLVLDHPR--NRLLVVAADVFGNKYSAVAAYDLST-WNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIW 174 (332)
Q Consensus 98 ~~~gi~vd~~~--g~l~v~~~~~~~~~~~~l~~~d~~~-g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~ 174 (332)
....++++++. |.++++... .+.|.+||.++ ++... ..+.+ .......+++.++|+.+++-+..+.|.
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~-----dg~i~iw~~~~~~~~~~-~~~~~---h~~~v~~~~~~~~~~~l~s~~~dg~v~ 111 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSW-----ANDVRCWEVQDSGQTIP-KAQQM---HTGPVLDVCWSDDGSKVFTASCDKTAK 111 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEET-----TSEEEEEEECTTSCEEE-EEEEE---CSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ceEEEEEcCCCCCceEEEEECC-----CCcEEEEEcCCCCceeE-EEecc---ccCCEEEEEECcCCCEEEEEcCCCcEE
Confidence 57899999964 465555432 45788999987 44432 22211 134577899999998888878889999
Q ss_pred EEcCCC-ceEEEecCCCCCCcccccCccccCeEEE--ccCceEEEEeCCCCeEEEEeCCCC
Q 020019 175 KVGVKG-EFLSIISSPLFTPKEWYKNLVGLNGIVY--HPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 175 ~v~~~g-~~~~~~~~~~~~~p~~~~~~~~~nGi~~--~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
.++... +....... ......+++ ++++.++++-...+.|..+++.++
T Consensus 112 iwd~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 112 MWDLSSNQAIQIAQH-----------DAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp EEETTTTEEEEEEEC-----------SSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS
T ss_pred EEEcCCCCceeeccc-----------cCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC
Confidence 888764 33333221 123578999 899965666666788999998876
No 297
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.00 E-value=0.17 Score=46.32 Aligned_cols=159 Identities=9% Similarity=0.017 Sum_probs=88.0
Q ss_pred eEEcC---CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCc-------C
Q 020019 50 AKWDD---SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADV-------F 119 (332)
Q Consensus 50 ia~d~---~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~-------~ 119 (332)
+++.+ ++.++++...++.|..+|..+++. +. ++..... .......+++.|+ |.+.++.... .
T Consensus 184 l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~----l~--tL~g~~~-~v~~v~~vafSpd-G~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 184 LTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL----LK--KMHIDDS-YQASVCHKAYSEM-GLLFIVLSHPCAKESESL 255 (356)
T ss_dssp EEEEEEETSTTEEEEEETTSEEEEEETTTCCE----EE--EEECCC----CCCEEEEEEET-TEEEEEEC----------
T ss_pred EEeeccCCCCceEEEecCCCcEEEEECCCCcE----EE--EEcCCCc-ceeeeEEEEECCC-CCEEEEeccCCCcceeec
Confidence 45555 667777778899999999998873 12 3321111 0124556788996 8766543210 0
Q ss_pred CCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCccccc
Q 020019 120 GNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYK 198 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~ 198 (332)
......+..||+++++......+..|....... +..+.+|.+.++-+..+.|...|.. |+....+....
T Consensus 256 Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~--lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~-------- 325 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF--LEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVS-------- 325 (356)
T ss_dssp --CCEEEEEEETTTTEEEEEEEECCCTTCCCCE--EEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC---------
T ss_pred cCCCcEEEEEECCCCEEEEEEEeeccCCCccee--EccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCC--------
Confidence 123456778999998876544322121101111 1222235566776667788778865 55444332110
Q ss_pred Ccccc-CeEEEccCceEEEEeCCCCeEEEEe
Q 020019 199 NLVGL-NGIVYHPDGFLIVIHTFSGNLFKID 228 (332)
Q Consensus 199 ~~~~~-nGi~~~~dG~Lyva~~~~~~i~~id 228 (332)
... ..++|+|||...++-...++|..++
T Consensus 326 --~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 326 --DQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp ---CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred --CCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 112 3589999995555556677776554
No 298
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.98 E-value=0.26 Score=49.43 Aligned_cols=188 Identities=15% Similarity=0.078 Sum_probs=103.4
Q ss_pred ccceEEcCCCCEEEEE-ecCC----eEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCC-
Q 020019 47 RECAKWDDSGRRFIVS-FLDG----GIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFG- 120 (332)
Q Consensus 47 pegia~d~~g~~~~~~-~~~g----~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~- 120 (332)
..+++|+|||+.+... ...| +|+.++..+++. .. ... ++ ....+++..++ ..|+++..+...
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~----~~--~~~--~~---~~~~~~~wspD-~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP----LA--DEL--KW---VKFSGLAWLGN-DALLYSRFAEPKE 232 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE----EE--EEE--EE---EESCCCEESTT-SEEEEEECCCC--
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC----CC--ccC--CC---ceeccEEEECC-CEEEEEEecCccc
Confidence 3468999999966544 3333 599999987762 11 111 11 01246788887 778877644210
Q ss_pred -------CccceEEEEECCCCcE--EEEEecCCCCCCCCCccceEECCCCc-EEEEeC----CCCeEEEEcCCCc----e
Q 020019 121 -------NKYSAVAAYDLSTWNR--LFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDV----TGSKIWKVGVKGE----F 182 (332)
Q Consensus 121 -------~~~~~l~~~d~~~g~~--~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~----~~~~I~~v~~~g~----~ 182 (332)
.....|+.++..+++. ...... +. ...+..++.+.+||+ |+++.. ....|+.++.++. .
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~--~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFAT--PE-LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECC--TT-CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEecc--CC-CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc
Confidence 0134688899877652 222222 11 112456789999996 554432 2468999887533 3
Q ss_pred EEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCC---CCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEe
Q 020019 183 LSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTF---SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELL 258 (332)
Q Consensus 183 ~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~---~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~ 258 (332)
..+.... ...... +++|| .||+.... +.+|++++++++. . ..+.+- ++ .-....++.+.
T Consensus 310 ~~l~~~~-----------~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~-~~~~l~-~~-~~~~l~~~~~~ 372 (741)
T 1yr2_A 310 TALIPDL-----------KAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST--P-RFDTVV-PE-SKDNLESVGIA 372 (741)
T ss_dssp EEEECSS-----------SSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS--C-EEEEEE-CC-CSSEEEEEEEE
T ss_pred EEecCCC-----------CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc--c-ccEEEe-cC-CCCeEEEEEEE
Confidence 3332211 011222 34777 78776542 5679999988641 0 222222 21 11224466666
Q ss_pred CCCeEEEEe
Q 020019 259 SPTKLVVAG 267 (332)
Q Consensus 259 ~dG~l~va~ 267 (332)
++.|+++.
T Consensus 373 -~~~lv~~~ 380 (741)
T 1yr2_A 373 -GNRLFASY 380 (741)
T ss_dssp -BTEEEEEE
T ss_pred -CCEEEEEE
Confidence 56777764
No 299
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.98 E-value=0.2 Score=45.27 Aligned_cols=75 Identities=12% Similarity=0.147 Sum_probs=53.5
Q ss_pred CCccceEECCCCcEEEEeCCCCe-EEEEcCC-CceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEE
Q 020019 150 SCADDVTVDAEGNAYVTDVTGSK-IWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKI 227 (332)
Q Consensus 150 ~~~ndiavd~dG~lyvtd~~~~~-I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~i 227 (332)
...+.+++.|+|++.++-+..+. |...|.. ++....+.... .....+.++|+|||.+.++-...+.|..+
T Consensus 196 ~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~--------h~~~v~~~~~s~~~~~l~s~s~d~~v~iw 267 (355)
T 3vu4_A 196 NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGL--------DRADVVDMKWSTDGSKLAVVSDKWTLHVF 267 (355)
T ss_dssp SCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTT--------CCSCEEEEEECTTSCEEEEEETTCEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--------CCCcEEEEEECCCCCEEEEEECCCEEEEE
Confidence 45778999999999998888887 8888875 55444332110 11245789999999666666677888888
Q ss_pred eCCCC
Q 020019 228 DIVDG 232 (332)
Q Consensus 228 d~~~~ 232 (332)
++..+
T Consensus 268 ~~~~~ 272 (355)
T 3vu4_A 268 EIFND 272 (355)
T ss_dssp ESSCC
T ss_pred EccCC
Confidence 88654
No 300
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.059 Score=55.67 Aligned_cols=167 Identities=13% Similarity=0.051 Sum_probs=103.4
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccce
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSA 125 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~ 125 (332)
....++|.+ |+++++...++.|..+|..+++. .. ++. .+ .....++++++...|+++.. .+.
T Consensus 60 ~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~----~~--~~~-~~----~~V~~v~~sp~g~~l~sgs~------dg~ 121 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV----LT--TVF-VP----GKITSIDTDASLDWMLIGLQ------NGS 121 (902)
T ss_dssp CEEEEEEET-TTEEEEEETTCEEEEEETTTCSE----EE--EEE-CS----SCEEEEECCTTCSEEEEEET------TSC
T ss_pred CEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE----EE--EEc-CC----CCEEEEEECCCCCEEEEEcC------CCc
Confidence 346789999 88565557789999999887652 22 222 22 25678999997444444443 356
Q ss_pred EEEEECCCCcEEEEEec-------CCCCCCCCCccceEECCC-CcEEEEeCCCCeEEEEcCC-CceEEEecCCCCC-Ccc
Q 020019 126 VAAYDLSTWNRLFLTQL-------SGPSDGKSCADDVTVDAE-GNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFT-PKE 195 (332)
Q Consensus 126 l~~~d~~~g~~~~~~~l-------~~~~~~~~~~ndiavd~d-G~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~-~p~ 195 (332)
|..||.++++... ..+ ..+.........++++|+ ++++++-+..+.| ..|.. ++....+...... .+.
T Consensus 122 V~lwd~~~~~~~~-~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~ 199 (902)
T 2oaj_A 122 MIVYDIDRDQLSS-FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPG 199 (902)
T ss_dssp EEEEETTTTEEEE-EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCC
T ss_pred EEEEECCCCcccc-ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCC
Confidence 8899999877532 211 001111246788999997 4566666777888 88876 3433333211000 000
Q ss_pred -------cccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCC
Q 020019 196 -------WYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 196 -------~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
........+.++|+|||..+++-...+.|..+|..++
T Consensus 200 ~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 200 GDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp STTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred cccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 0000134689999999966666677888988998876
No 301
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.084 Score=50.99 Aligned_cols=190 Identities=14% Similarity=0.091 Sum_probs=111.2
Q ss_pred ccceEEcCC------CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccC--cC--CCccceEEEeCCCCeEEEEEe
Q 020019 47 RECAKWDDS------GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLE--LT--GNGSLGLVLDHPRNRLLVVAA 116 (332)
Q Consensus 47 pegia~d~~------g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~gi~vd~~~g~l~v~~~ 116 (332)
...++|.|+ ++++.+...+|.|..++..++... .........|. +. ...+..+++.++ +.|..+..
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~---~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~ 285 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD---VHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFK 285 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS---SSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEET
T ss_pred EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc---cccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeC
Confidence 456888886 456666677899988887655320 00000000110 11 124678888875 66555543
Q ss_pred CcCCCccceEEEEECCCCc-EEEEEecCCCCCCCCCccce--EECCCC-cEEEEeCCCCeEEEEcCC-CceE-EEecCCC
Q 020019 117 DVFGNKYSAVAAYDLSTWN-RLFLTQLSGPSDGKSCADDV--TVDAEG-NAYVTDVTGSKIWKVGVK-GEFL-SIISSPL 190 (332)
Q Consensus 117 ~~~~~~~~~l~~~d~~~g~-~~~~~~l~~~~~~~~~~ndi--avd~dG-~lyvtd~~~~~I~~v~~~-g~~~-~~~~~~~ 190 (332)
.+.|..||+++++ ....... . ....+++ ++.++| ++++|-+..+.|...|.. ++.. .+.....
T Consensus 286 ------DgtV~lWD~~~~~~~~~~~~~--H---~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~ 354 (524)
T 2j04_B 286 ------NGFVAEFDLTDPEVPSFYDQV--H---DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFR 354 (524)
T ss_dssp ------TSEEEEEETTBCSSCSEEEEC--S---SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECS
T ss_pred ------CCEEEEEECCCCCCceEEeec--c---cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccc
Confidence 3578899998663 2222221 1 2345667 456777 899998888988888865 2321 1111100
Q ss_pred CCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 191 FTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 191 ~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
......++|+|++..+++-...+.|..+++.++. ....+.. .......+++.|+|+++++.
T Consensus 355 ---------~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~----~~~~l~g---H~~~V~sva~Sp~g~~l~Sg 415 (524)
T 2j04_B 355 ---------GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF----AVHPLVS---RETTITAIGVSRLHPMVLAG 415 (524)
T ss_dssp ---------CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT----CCEEEEE---CSSCEEEEECCSSCCBCEEE
T ss_pred ---------cCcccceEeCCCcCeEEEeCCCCcEEEEECcccc----cceeeec---CCCceEEEEeCCCCCeEEEE
Confidence 0124679999999667776677778888887652 2232321 22445677888887766664
No 302
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.83 E-value=0.3 Score=45.17 Aligned_cols=218 Identities=15% Similarity=0.109 Sum_probs=115.4
Q ss_pred ccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceE
Q 020019 47 RECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAV 126 (332)
Q Consensus 47 pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l 126 (332)
...+.++ ++.+++...++.|..++..+++. .. .+.... .....+.++. ..++++.. .+.+
T Consensus 202 v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~----~~--~~~~~~----~~v~~~~~~~--~~l~~~~~------dg~i 261 (445)
T 2ovr_B 202 VRCMHLH--EKRVVSGSRDATLRVWDIETGQC----LH--VLMGHV----AAVRCVQYDG--RRVVSGAY------DFMV 261 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSEEEEEESSSCCE----EE--EEECCS----SCEEEEEECS--SCEEEEET------TSCE
T ss_pred EEEEEec--CCEEEEEeCCCEEEEEECCCCcE----EE--EEcCCc----ccEEEEEECC--CEEEEEcC------CCEE
Confidence 3445564 45566666788999999876652 11 222111 2456777743 45555543 3568
Q ss_pred EEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccCe
Q 020019 127 AAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNG 205 (332)
Q Consensus 127 ~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nG 205 (332)
..||.++++....... . ......+++ +|+.+++-+..+.|..+|.. ++....+... ......
T Consensus 262 ~iwd~~~~~~~~~~~~--~---~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----------~~~v~~ 324 (445)
T 2ovr_B 262 KVWDPETETCLHTLQG--H---TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH----------QSLTSG 324 (445)
T ss_dssp EEEEGGGTEEEEEECC--C---SSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCC----------CSCEEE
T ss_pred EEEECCCCcEeEEecC--C---CCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC----------cccEEE
Confidence 8999988776544332 1 234556666 66777777778888888865 4543332211 112234
Q ss_pred EEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEE-eCC-ceEEEEcCCCceEE
Q 020019 206 IVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVA-GNP-SARLVESSDGWETA 283 (332)
Q Consensus 206 i~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va-~~~-~~~~v~~~dg~~~~ 283 (332)
+.+ ++.++++-...+.|..+++.+++ .+..+............++++ ++++++ ... ..++....++....
T Consensus 325 ~~~--~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 325 MEL--KDNILVSGNADSTVKIWDIKTGQ----CLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEE--ETTEEEEEETTSCEEEEETTTCC----EEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEE--eCCEEEEEeCCCeEEEEECCCCc----EEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceee
Confidence 554 45344445567789999988762 454444321122334566665 344444 433 34444566663332
Q ss_pred EEEeeecCCCcccceEEEE-ECCeEEE
Q 020019 284 AVVAKFSGPVHRLATAATV-KDGRVYL 309 (332)
Q Consensus 284 ~~~~~~~~~~~~~pt~va~-~~g~lyv 309 (332)
.+......+.....+++++ .++.+.+
T Consensus 397 ~~~~~~~~~~~~~v~~~~~s~~~~~la 423 (445)
T 2ovr_B 397 NLVTLESGGSGGVVWRIRASNTKLVCA 423 (445)
T ss_dssp EEEECTTGGGTCEEEEEEECSSEEEEE
T ss_pred eeeccccCCCCceEEEEEecCCEEEEE
Confidence 2221111111223466777 4444433
No 303
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.79 E-value=0.23 Score=43.10 Aligned_cols=162 Identities=8% Similarity=-0.002 Sum_probs=97.1
Q ss_pred CccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 44 SFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 44 ~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
......+.+.++++.+++...++.|..++..+++.. .. ....... .......+...+....+.....+. ..
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---~~--~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~---~~ 220 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG---WV--PLQTFTQ-HQGAVKAVAWCPWQSNVLATGGGT---SD 220 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB---SC--CSEEECC-CCSCEEEEEECTTSTTEEEEEECT---TT
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc---cc--ceeeecc-cCCceEEEEecCCCCcEEEEEecC---CC
Confidence 335567889999998887777899999998765421 00 0110011 112456777777645544333221 24
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEE--eCCCCeEEEEcCC-CceEEEecCCCCCCcccccCc
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVT--DVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNL 200 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvt--d~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~ 200 (332)
..+..||.+.++....... ......+.+.++++.+++ ....+.|..+|.. ++....+.. ..
T Consensus 221 ~~i~lwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g----------H~ 284 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVDA------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG----------HT 284 (318)
T ss_dssp CEEEEEETTTCCEEEEEEC------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC----------CS
T ss_pred CEEEEEecccccccccccc------eeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC----------CC
Confidence 5688899988776544332 233556788888764443 3356788888865 554433321 11
Q ss_pred cccCeEEEccCceEEEEeCCCCeEEEEeCC
Q 020019 201 VGLNGIVYHPDGFLIVIHTFSGNLFKIDIV 230 (332)
Q Consensus 201 ~~~nGi~~~~dG~Lyva~~~~~~i~~id~~ 230 (332)
...+.|+|+|||.+.++-...++|..+++.
T Consensus 285 ~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 285 SRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 235789999999555565667777666654
No 304
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.70 E-value=0.26 Score=42.67 Aligned_cols=197 Identities=13% Similarity=0.055 Sum_probs=98.8
Q ss_pred cCCccccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCC
Q 020019 42 SSSFFRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGN 121 (332)
Q Consensus 42 ~~~~~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~ 121 (332)
........++++++|+.+++...++.|..++..+++. .. .+.... .....+..+ +.+.++...
T Consensus 65 ~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~----~~--~~~~h~----~~~~~~~~~---~~~l~s~~~---- 127 (318)
T 4ggc_A 65 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR----LR--NMTSHS----ARVGSLSWN---SYILSSGSR---- 127 (318)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----EE--EEECCS----SCEEEEEEE---TTEEEEEET----
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee----EE--EecCcc----ceEEEeecC---CCEEEEEec----
Confidence 3333456799999999888888889999999887652 11 222111 122333333 333333221
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-Cce-----EE-----------
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEF-----LS----------- 184 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~-----~~----------- 184 (332)
.+.+..++..++..... .+.+ .......+++.++|+.+++-...+.|..+|.. ++. ..
T Consensus 128 -~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 202 (318)
T 4ggc_A 128 -SGHIHHHDVRVAEHHVA-TLSG---HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAV 202 (318)
T ss_dssp -TSEEEEEETTSSSCEEE-EEEC---CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEE
T ss_pred -CCceEeeecCCCceeEE-EEcC---ccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEE
Confidence 23455566655432221 1111 12344556666777666665555555555432 110 00
Q ss_pred ----------------------EecCCCCCCcccccCccccCeEEEccCc-eEEEEe-CCCCeEEEEeCCCCCCccceeE
Q 020019 185 ----------------------IISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIH-TFSGNLFKIDIVDGVGEGEEIK 240 (332)
Q Consensus 185 ----------------------~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~-~~~~~i~~id~~~~~~~~~~~~ 240 (332)
+++..................+++.+++ .++++. ...+.|..++..+++ .+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~----~~~ 278 (318)
T 4ggc_A 203 AWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA----KVA 278 (318)
T ss_dssp EECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC----EEE
T ss_pred EecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc----EEE
Confidence 0000000000000112234566777777 555543 346677777777652 344
Q ss_pred EEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 241 LIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 241 ~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
.+. + +......|++.+||+++++.
T Consensus 279 ~l~--g-H~~~V~~l~~spdg~~l~S~ 302 (318)
T 4ggc_A 279 ELK--G-HTSRVLSLTMSPDGATVASA 302 (318)
T ss_dssp EEC--C-CSSCEEEEEECTTSSCEEEE
T ss_pred EEc--C-CCCCEEEEEEcCCCCEEEEE
Confidence 333 1 22445677888887766664
No 305
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.66 E-value=0.63 Score=46.54 Aligned_cols=158 Identities=10% Similarity=0.094 Sum_probs=85.4
Q ss_pred cCCCCEEE-EEec----CCeEEEEECC---CCCCCccceeeeEEecccCcC--C-CccceEEEeCCCCeEEEEEeCcCCC
Q 020019 53 DDSGRRFI-VSFL----DGGIGQVAVP---DDYPPGTVLEEVTLVKDLELT--G-NGSLGLVLDHPRNRLLVVAADVFGN 121 (332)
Q Consensus 53 d~~g~~~~-~~~~----~g~I~~vd~~---~~~~~~~~~~~~~~~~~~~~~--~-~~~~gi~vd~~~g~l~v~~~~~~~~ 121 (332)
.++|+.++ +... .+.|++.+.. +++. + .++....+. + ....++.+.|+ |+..+...+..+.
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~--~lld~~~l~~~~~~~~~~~~~SPD-G~~la~~~~~~G~ 186 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKG-----R--VLLDPNTWAKDGATALDAWAASDD-GRLLAYSVQDGGS 186 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCC-----E--EEECGGGCC----EEEEEEEECTT-SSEEEEEEEETTC
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCC-----E--EEECHHHhccCCCEEEEeEEECCC-CCEEEEEEcCCCC
Confidence 36777554 3322 2568999875 4442 2 343211111 1 13567899997 6533222221111
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC-------------CCeEEEEcCCCce---EEE
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT-------------GSKIWKVGVKGEF---LSI 185 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~-------------~~~I~~v~~~g~~---~~~ 185 (332)
....|+++|+++|+.... .+. .....++++.||..||++... ...|++.+..+.. ..+
T Consensus 187 e~~~i~v~dl~tg~~~~~-~~~-----~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv 260 (741)
T 1yr2_A 187 DWRTVKFVGVADGKPLAD-ELK-----WVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPV 260 (741)
T ss_dssp SEEEEEEEETTTCCEEEE-EEE-----EEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEE
T ss_pred ceEEEEEEECCCCCCCCc-cCC-----CceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEE
Confidence 235699999999987543 221 011246889888336666432 2358877764221 222
Q ss_pred ecCCCCCCcccccCccccCeEEEccCc-eEEEEeC----CCCeEEEEeCCCC
Q 020019 186 ISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHT----FSGNLFKIDIVDG 232 (332)
Q Consensus 186 ~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~----~~~~i~~id~~~~ 232 (332)
...+. ......++.+++|| .|+++.. .+..|+.++++++
T Consensus 261 ~~~~~--------~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 261 FATPE--------LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp ECCTT--------CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred eccCC--------CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 22110 00124588999999 6776654 2458999998865
No 306
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.62 E-value=0.088 Score=49.40 Aligned_cols=146 Identities=16% Similarity=0.126 Sum_probs=87.1
Q ss_pred ccceEEEeCCCCeEEE-E--EeCcCCCccceEEEEECCCC--------cEEEEEecCCCCCCCCCccceEECCC-CcEEE
Q 020019 98 GSLGLVLDHPRNRLLV-V--AADVFGNKYSAVAAYDLSTW--------NRLFLTQLSGPSDGKSCADDVTVDAE-GNAYV 165 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v-~--~~~~~~~~~~~l~~~d~~~g--------~~~~~~~l~~~~~~~~~~ndiavd~d-G~lyv 165 (332)
.+..++++++ |++.+ + ... ..+.+.+||.+++ +........ ........++++.|+ +++++
T Consensus 94 ~v~~l~~spd-g~~lav~~~sgs----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 94 PIHHLALSCD-NLTLSACMMSSE----YGSIIAFFDVRTFSNEAKQQKRPFAYHKLL--KDAGGMVIDMKWNPTVPSMVA 166 (434)
T ss_dssp CEEEEEECTT-SCEEEEEEEETT----TEEEEEEEEHHHHHCTTCSSCCCSEEEECC--CSGGGSEEEEEECSSCTTEEE
T ss_pred cccEEEEcCC-CCEEEEEEeccC----CCceEEEEEccccccCCcCCcceeeeeecc--CCCCCceEEEEECCCCCCEEE
Confidence 4789999997 55444 2 221 2457889997654 111122221 111246788999998 78898
Q ss_pred EeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEe
Q 020019 166 TDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRV 244 (332)
Q Consensus 166 td~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~ 244 (332)
+-+..+.|..+|............ .......++|+|+| .|+++. ..++|..++.+ ++ ....+..
T Consensus 167 s~s~Dg~v~iwD~~~~~~~~~~~~---------~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~-~~----~~~~~~~ 231 (434)
T 2oit_A 167 VCLADGSIAVLQVTETVKVCATLP---------STVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPT-LQ----EKKVIPC 231 (434)
T ss_dssp EEETTSCEEEEEESSSEEEEEEEC---------GGGCEEEEEECTTSSCEEEEE-TTSCEEEECTT-CC----EEEEECC
T ss_pred EEECCCeEEEEEcCCCcceeeccC---------CCCceeEEEEcCCCCEEEEEc-CCCcEEEEccC-Cc----ccccccC
Confidence 888889888888664322211100 11346799999999 666665 67789888887 41 3333332
Q ss_pred cCCCC-----CCCCeEEEeCCCeEEEE
Q 020019 245 AGGPL-----SFGDGLELLSPTKLVVA 266 (332)
Q Consensus 245 ~g~~~-----~~pdGi~~~~dG~l~va 266 (332)
. ... .....++..+++.++++
T Consensus 232 ~-~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 232 P-PFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp C-TTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred C-cccCCCCceeEEEEEEecCceEEEE
Confidence 2 111 13446777777766544
No 307
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.62 E-value=0.43 Score=44.05 Aligned_cols=169 Identities=17% Similarity=0.225 Sum_probs=97.2
Q ss_pred CCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCC
Q 020019 55 SGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTW 134 (332)
Q Consensus 55 ~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g 134 (332)
+++.+++...+|.|..++..+++. .. .+... ......+.+++ +.++.+.. .+.+..||.+++
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~----~~--~~~~h----~~~v~~l~~~~--~~l~s~s~------dg~i~vwd~~~~ 243 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEM----LN--TLIHH----CEAVLHLRFNN--GMMVTCSK------DRSIAVWDMASP 243 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCE----EE--EECCC----CSCEEEEECCT--TEEEEEET------TSCEEEEECSSS
T ss_pred CCCEEEEEcCCCeEEEEECCCCcE----EE--EEcCC----CCcEEEEEEcC--CEEEEeeC------CCcEEEEeCCCC
Confidence 677777777789999999876652 11 22211 12456777764 56555554 356889999887
Q ss_pred cEEEE-EecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccCeEEEccCc
Q 020019 135 NRLFL-TQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG 212 (332)
Q Consensus 135 ~~~~~-~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG 212 (332)
+.... ..+.+ .....+.+++ +|+.+++-+..+.|..+|.. ++....+... ......+.+ ++
T Consensus 244 ~~~~~~~~~~~---~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----------~~~v~~~~~--~~ 306 (435)
T 1p22_A 244 TDITLRRVLVG---HRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH----------KRGIACLQY--RD 306 (435)
T ss_dssp SCCEEEEEECC---CSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECC----------SSCEEEEEE--ET
T ss_pred CCceeeeEecC---CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCC----------CCcEEEEEe--CC
Confidence 64322 22211 1234556666 56777777778899888876 4443333211 112345666 45
Q ss_pred eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEe
Q 020019 213 FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 213 ~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~ 267 (332)
.++++-...+.|..+|..+++ .+..+.. .......+++ +++.+++.
T Consensus 307 ~~l~~g~~dg~i~iwd~~~~~----~~~~~~~---h~~~v~~~~~--~~~~l~sg 352 (435)
T 1p22_A 307 RLVVSGSSDNTIRLWDIECGA----CLRVLEG---HEELVRCIRF--DNKRIVSG 352 (435)
T ss_dssp TEEEEEETTSCEEEEETTTCC----EEEEECC---CSSCEEEEEC--CSSEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCC----EEEEEeC---CcCcEEEEEe--cCCEEEEE
Confidence 444445567789999998762 3443432 2233445555 45555543
No 308
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.51 E-value=0.51 Score=43.56 Aligned_cols=183 Identities=11% Similarity=0.047 Sum_probs=103.2
Q ss_pred EEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEE
Q 020019 51 KWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYD 130 (332)
Q Consensus 51 a~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d 130 (332)
++..+++.+++...+|.|..++..+++. .. .+.... .....+.++. ..|+.+.. .+.|.+||
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~----~~--~~~~h~----~~v~~l~~~~--~~l~sg~~------dg~i~vwd 199 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLEC----KR--ILTGHT----GSVLCLQYDE--RVIITGSS------DSTVRVWD 199 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCE----EE--EECCCS----SCEEEEECCS--SEEEEEET------TSCEEEEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeE----EE--EEcCCC----CcEEEEEECC--CEEEEEcC------CCeEEEEE
Confidence 4566788888777889999999876652 11 222111 2456676642 44444443 35689999
Q ss_pred CCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCC-ceE---EEecCCCCCCcccccCccccCeE
Q 020019 131 LSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKG-EFL---SIISSPLFTPKEWYKNLVGLNGI 206 (332)
Q Consensus 131 ~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g-~~~---~~~~~~~~~~p~~~~~~~~~nGi 206 (332)
.++++....... . ......++++ ++.+++-+..+.|..++... +.. ..... .....+.+
T Consensus 200 ~~~~~~~~~~~~--h---~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~----------~~~~v~~~ 262 (435)
T 1p22_A 200 VNTGEMLNTLIH--H---CEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVG----------HRAAVNVV 262 (435)
T ss_dssp SSSCCEEEEECC--C---CSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECC----------CSSCEEEE
T ss_pred CCCCcEEEEEcC--C---CCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecC----------CCCcEEEE
Confidence 999887654432 1 2345556665 34677767778888887652 221 11111 11234566
Q ss_pred EEccCc-eEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC-CceEEEEcCCC
Q 020019 207 VYHPDG-FLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN-PSARLVESSDG 279 (332)
Q Consensus 207 ~~~~dG-~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~-~~~~~v~~~dg 279 (332)
++ ++ .|+++ ...+.|..+|+.+++ .+..+.. .......+.+++ ..++++.. +..++.....+
T Consensus 263 ~~--~~~~l~s~-~~dg~i~vwd~~~~~----~~~~~~~---~~~~v~~~~~~~-~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 263 DF--DDKYIVSA-SGDRTIKVWNTSTCE----FVRTLNG---HKRGIACLQYRD-RLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp EE--ETTEEEEE-ETTSEEEEEETTTCC----EEEEEEC---CSSCEEEEEEET-TEEEEEETTSCEEEEETTTC
T ss_pred Ee--CCCEEEEE-eCCCeEEEEECCcCc----EEEEEcC---CCCcEEEEEeCC-CEEEEEeCCCeEEEEECCCC
Confidence 66 56 55544 567889999998762 4444442 223344555542 33444443 33454455556
No 309
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.47 E-value=0.019 Score=57.10 Aligned_cols=112 Identities=9% Similarity=0.072 Sum_probs=69.2
Q ss_pred ceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeC--------CC
Q 020019 100 LGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDV--------TG 170 (332)
Q Consensus 100 ~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~--------~~ 170 (332)
.++...++ |++++... .+.|.+||.++++........ .........+++.|||+ |+++.. ..
T Consensus 19 ~~~~~s~d-g~~~~~~~------d~~i~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 19 FFPNWISG-QEYLHQSA------DNNIVLYNIETGQSYTILSNR--TMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp CCCEESSS-SEEEEECT------TSCEEEEESSSCCEEEEECHH--HHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred CccEECCC-CeEEEEcC------CCCEEEEEcCCCcEEEEEccc--cccccceeeEEECCCCCeEEEEecCceeEEeecc
Confidence 36678886 76444432 346899999998876544321 00001256799999997 444322 24
Q ss_pred CeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCC
Q 020019 171 SKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 171 ~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~ 232 (332)
+.|+.++.++.... ...... .....++|+||| .|.++. .++|+.+++.++
T Consensus 90 ~~i~~~d~~~g~~~--~~~~l~--------~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g 140 (719)
T 1z68_A 90 ATYYIYDLSNGEFV--RGNELP--------RPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGD 140 (719)
T ss_dssp EEEEEEETTTTEEC--CSSCCC--------SSBCCEEECSSTTCEEEEE--TTEEEEESSTTS
T ss_pred eEEEEEECCCCccc--cceecC--------cccccceECCCCCEEEEEE--CCeEEEEeCCCC
Confidence 78888887754320 000110 235679999999 777664 568999998876
No 310
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.42 E-value=0.047 Score=48.64 Aligned_cols=113 Identities=14% Similarity=0.168 Sum_probs=70.7
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeC----CCCeEEEEcCCC-ceEEEecCCCCCCccc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDV----TGSKIWKVGVKG-EFLSIISSPLFTPKEW 196 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~----~~~~I~~v~~~g-~~~~~~~~~~~~~p~~ 196 (332)
...|+.+|.++++.... .....+++.|||+ |+++.. ....|+.++.++ +...+...+
T Consensus 42 ~~~l~~~d~~~~~~~~l----------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~------- 104 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----------ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK------- 104 (347)
T ss_dssp EEEEEEEETTTCCEEEE----------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-------
T ss_pred cceEEEEeCCCCceEEc----------ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-------
Confidence 45688999988775433 1234589999996 554432 234699998764 433332211
Q ss_pred ccCccccCeEEEccCc-eEEEEeCC--------------------------CCeEEEEeCCCCCCccceeEEEEecCCCC
Q 020019 197 YKNLVGLNGIVYHPDG-FLIVIHTF--------------------------SGNLFKIDIVDGVGEGEEIKLIRVAGGPL 249 (332)
Q Consensus 197 ~~~~~~~nGi~~~~dG-~Lyva~~~--------------------------~~~i~~id~~~~~~~~~~~~~v~~~g~~~ 249 (332)
. ...++|+||| .|+++... ..+|+.+++.+++ .++.+.. +
T Consensus 105 ----~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~----~~~~l~~---~- 171 (347)
T 2gop_A 105 ----N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE----VIEEFEK---P- 171 (347)
T ss_dssp ----E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE----EEEEEEE---E-
T ss_pred ----C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe----EEeeecC---C-
Confidence 1 4688999999 78777532 3578999998762 2143432 1
Q ss_pred CCCCeEEEeCCCeEEEEe
Q 020019 250 SFGDGLELLSPTKLVVAG 267 (332)
Q Consensus 250 ~~pdGi~~~~dG~l~va~ 267 (332)
....+++.+|| ++++.
T Consensus 172 -~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 172 -RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp -TTCEEEEETTE-EEEEE
T ss_pred -CcccccCCCCe-EEEEE
Confidence 44577888888 55543
No 311
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.41 E-value=0.067 Score=53.72 Aligned_cols=114 Identities=9% Similarity=0.041 Sum_probs=69.0
Q ss_pred cceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEE-eC-------C
Q 020019 99 SLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVT-DV-------T 169 (332)
Q Consensus 99 ~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvt-d~-------~ 169 (332)
...+...++ |.+++.. + +.|..||.++++............-....+++++.|||+ |+++ +. .
T Consensus 19 ~~~~~w~~d-g~~~~~~-~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 19 LYSLRWISD-HEYLYKQ-E------NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCEEECSS-SEEEEEE-T------TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred ccccEECCC-CcEEEEc-C------CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 357788886 7755554 3 468899999998765443211011112346689999997 4443 21 1
Q ss_pred CCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCCC
Q 020019 170 GSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 170 ~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~~ 232 (332)
.+.++.+|.++.....+.. ........+|+||| .|.++. .+.||..+..++
T Consensus 91 ~~~~~~~d~~~~~~~~l~~----------~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~ 142 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITEER----------IPNNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNL 142 (740)
T ss_dssp EEEEEEEETTTTEECCSSC----------CCTTEEEEEECSSTTCEEEEE--TTEEEEESSTTS
T ss_pred ceEEEEEECCCCcEEEccc----------CCCcceeeEECCCCCEEEEEE--CCeEEEEECCCC
Confidence 2677888877543322211 01134578899999 666653 467998888766
No 312
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.32 E-value=0.05 Score=52.63 Aligned_cols=157 Identities=10% Similarity=-0.004 Sum_probs=95.4
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEE--EeCCCC-eEEEEEeCcCCCc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLV--LDHPRN-RLLVVAADVFGNK 122 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~--vd~~~g-~l~v~~~~~~~~~ 122 (332)
...+++|.+++ .++++..+|.|..+|..++..+ .. .+.... .....++ ..++ + +++++...
T Consensus 268 ~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~---~~--~~~~H~----~~V~sv~~~~s~~-g~~~laS~S~----- 331 (524)
T 2j04_B 268 LITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVP---SF--YDQVHD----SYILSVSTAYSDF-EDTVVSTVAV----- 331 (524)
T ss_dssp CEEEEEESSSS-EEEEEETTSEEEEEETTBCSSC---SE--EEECSS----SCEEEEEEECCTT-SCCEEEEEET-----
T ss_pred CEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCc---eE--Eeeccc----ccEEEEEEEcCCC-CCeEEEEecc-----
Confidence 44568888764 5666677899999998755421 11 122111 2456773 4553 6 65555432
Q ss_pred cceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-Cce-EEEecCCCCCCcccccCc
Q 020019 123 YSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEF-LSIISSPLFTPKEWYKNL 200 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~-~~~~~~~~~~~p~~~~~~ 200 (332)
.+.+..||+++++......-. . .......+++.|+|..+++-...+.|..++.. ++. ..+... .
T Consensus 332 D~tvklWD~~~~~~~~~~~~~--~-~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH-----------~ 397 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSR--F-RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR-----------E 397 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEE--C-SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEEC-----------S
T ss_pred CCeEEEEECCCCCcccccccc--c-ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecC-----------C
Confidence 456889999876543222110 0 01224679999999888887777777777754 332 222221 1
Q ss_pred cccCeEEEccCceEEEEeCCCCeEEEEeCCCC
Q 020019 201 VGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 201 ~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
...+.|+|+|+|.++++-...++|..+++...
T Consensus 398 ~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 398 TTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp SCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred CceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 24579999999965566677888877776543
No 313
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=95.80 E-value=1.1 Score=40.87 Aligned_cols=139 Identities=10% Similarity=0.029 Sum_probs=73.5
Q ss_pred CeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC------------CCCeEEEE
Q 020019 109 NRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV------------TGSKIWKV 176 (332)
Q Consensus 109 g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~------------~~~~I~~v 176 (332)
+.++++... .+.|.+||+++|+....+.- ..........+++.|+|.+.++-+ ..+.|...
T Consensus 193 ~~~LaSgS~-----D~TIkIWDl~TGk~l~tL~g--~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 193 QEALLGTTI-----MNNIVIWNLKTGQLLKKMHI--DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp TTEEEEEET-----TSEEEEEETTTCCEEEEEEC--CC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred CceEEEecC-----CCcEEEEECCCCcEEEEEcC--CCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 566666442 45688999999997765532 111123455668999997765533 22344445
Q ss_pred cCC-CceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCC-Ce
Q 020019 177 GVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFG-DG 254 (332)
Q Consensus 177 ~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~p-dG 254 (332)
+++ |+......- .+ |. +..+ .=+..+.+|.+.++-..+++|.-+|+.+++ .+..+. + +...+ ..
T Consensus 266 d~~tgk~l~v~~~-~~--p~---Gh~~-~~lsg~~sg~~lASgS~DgTIkIWDl~tGk----~l~tL~--g-H~~~vvs~ 331 (356)
T 2w18_A 266 NPKTTLSVGVMLY-CL--PP---GQAG-RFLEGDVKDHCAAAILTSGTIAIWDLLLGQ----CTALLP--P-VSDQHWSF 331 (356)
T ss_dssp ETTTTEEEEEEEE-CC--CT---TCCC-CEEEEEEETTEEEEEETTSCEEEEETTTCS----EEEEEC--C-C--CCCCE
T ss_pred ECCCCEEEEEEEe-ec--cC---CCcc-eeEccccCCCEEEEEcCCCcEEEEECCCCc----EEEEec--C-CCCCeEEE
Confidence 554 332221100 00 00 0000 011222225456666667888889998873 344443 1 22222 35
Q ss_pred EEEeCCCeEEEEeC
Q 020019 255 LELLSPTKLVVAGN 268 (332)
Q Consensus 255 i~~~~dG~l~va~~ 268 (332)
+++.|||+++++..
T Consensus 332 vafSPDG~~LaSGS 345 (356)
T 2w18_A 332 VKWSGTDSHLLAGQ 345 (356)
T ss_dssp EEECSSSSEEEEEC
T ss_pred EEECCCCCEEEEEE
Confidence 88999999888764
No 314
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.74 E-value=1.2 Score=44.03 Aligned_cols=78 Identities=10% Similarity=0.001 Sum_probs=48.5
Q ss_pred ceEEcCCCCEEEEE-ecCCeEEEEECCCCCCCccceeeeEEecccCcC-CCccceEEEeCCCCeEEEEEe-CcCCCccce
Q 020019 49 CAKWDDSGRRFIVS-FLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELT-GNGSLGLVLDHPRNRLLVVAA-DVFGNKYSA 125 (332)
Q Consensus 49 gia~d~~g~~~~~~-~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gi~vd~~~g~l~v~~~-~~~~~~~~~ 125 (332)
+.++..+|++|+.. .....++++|+.+.++ ..-+.+. .+.-.+.++-++ |++||..+ .........
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W----------~~~~~~~~~R~~~s~~~~~d-g~iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSW----------IPGPDMQVARGYQSSATMSD-GRVFTIGGSWSGGVFEKN 315 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEE----------EECCCCSSCCSSCEEEECTT-SCEEEECCCCCSSSCCCC
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCce----------eECCCCCccccccceEEecC-CeEEEEeCcccCCccccc
Confidence 46777889998877 4556899999886653 2222222 123345566554 89999864 111112356
Q ss_pred EEEEECCCCcEE
Q 020019 126 VAAYDLSTWNRL 137 (332)
Q Consensus 126 l~~~d~~~g~~~ 137 (332)
+.+||+++++..
T Consensus 316 ~e~yd~~t~~W~ 327 (656)
T 1k3i_A 316 GEVYSPSSKTWT 327 (656)
T ss_dssp EEEEETTTTEEE
T ss_pred ceEeCCCCCcce
Confidence 889999887644
No 315
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.65 E-value=1.1 Score=39.91 Aligned_cols=187 Identities=14% Similarity=0.073 Sum_probs=97.2
Q ss_pred cceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEE
Q 020019 48 ECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVA 127 (332)
Q Consensus 48 egia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~ 127 (332)
..+++.+++++|++. ..+.|++-+ +.++. -+ ... .+. .....+++++++ +++|++... +.++
T Consensus 125 ~~i~~~~~~~~~~~~-~~g~v~~S~-DgG~t----W~--~~~-~~~--~~~~~~~~~~~~-~~~~~~g~~------G~~~ 186 (327)
T 2xbg_A 125 RLIKALGNGSAEMIT-NVGAIYRTK-DSGKN----WQ--ALV-QEA--IGVMRNLNRSPS-GEYVAVSSR------GSFY 186 (327)
T ss_dssp EEEEEEETTEEEEEE-TTCCEEEES-STTSS----EE--EEE-CSC--CCCEEEEEECTT-SCEEEEETT------SSEE
T ss_pred EEEEEECCCCEEEEe-CCccEEEEc-CCCCC----CE--Eee-cCC--CcceEEEEEcCC-CcEEEEECC------CcEE
Confidence 345555666666544 356677643 43431 01 111 111 124578888885 888876542 3455
Q ss_pred EEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccCeE
Q 020019 128 AYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGI 206 (332)
Q Consensus 128 ~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi 206 (332)
+-+-..|+-...... +. .....+++++++|++|+... .+.+++-+.+ |+.-.....+.+ + .......|
T Consensus 187 ~S~d~gG~tW~~~~~--~~--~~~~~~~~~~~~g~~~~~~~-~G~~~~s~~D~G~tW~~~~~~~~--~----~~~~~~~v 255 (327)
T 2xbg_A 187 STWEPGQTAWEPHNR--TT--SRRLHNMGFTPDGRLWMIVN-GGKIAFSDPDNSENWGELLSPLR--R----NSVGFLDL 255 (327)
T ss_dssp EEECTTCSSCEEEEC--CS--SSCEEEEEECTTSCEEEEET-TTEEEEEETTEEEEECCCBCTTS--S----CCSCEEEE
T ss_pred EEeCCCCCceeECCC--CC--CCccceeEECCCCCEEEEeC-CceEEEecCCCCCeeEeccCCcc--c----CCcceEEE
Confidence 433221332222222 11 24567899999999987754 4667765445 442211111100 0 11235678
Q ss_pred EEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCC-CCCCeEEEeCCCeEEEEeCCc
Q 020019 207 VYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPL-SFGDGLELLSPTKLVVAGNPS 270 (332)
Q Consensus 207 ~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~-~~pdGi~~~~dG~l~va~~~~ 270 (332)
++.+++.+|++.. .+.|++ ..+.++ .-+.+... ... .....+++.+++++|++.+..
T Consensus 256 ~~~~~~~~~~~g~-~g~i~~-S~DgG~----tW~~~~~~-~~~~~~~~~v~~~~~~~~~~~G~~G 313 (327)
T 2xbg_A 256 AYRTPNEVWLAGG-AGALLC-SQDGGQ----TWQQDVDV-KKVPSNFYKILFFSPDQGFILGQKG 313 (327)
T ss_dssp EESSSSCEEEEES-TTCEEE-ESSTTS----SCEECGGG-TTSSSCCCEEEEEETTEEEEECSTT
T ss_pred EecCCCEEEEEeC-CCeEEE-eCCCCc----ccEEcCcc-CCCCCCeEEEEEECCCceEEEcCCc
Confidence 8888888888755 455653 445442 22222211 111 234678887778888887664
No 316
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.58 E-value=1.2 Score=43.06 Aligned_cols=195 Identities=12% Similarity=0.092 Sum_probs=110.1
Q ss_pred CCCEEEEE-ecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEe--CCCCeEEEEEeCcC--CC--------
Q 020019 55 SGRRFIVS-FLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLD--HPRNRLLVVAADVF--GN-------- 121 (332)
Q Consensus 55 ~g~~~~~~-~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd--~~~g~l~v~~~~~~--~~-------- 121 (332)
||+.+|.+ -.+.||.||+.+.-++ . ..+.-|... +..|+++- |+++.++......- ++
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~-----d--~Ii~iPn~~--~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~ 211 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKC-----D--KMITVPNVQ--AIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQ 211 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEE-----E--EEEECTTCS--CEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTT
T ss_pred eeEEEEEecCCCcceEEEECCcEee-----c--eeEeCCCCc--CcccccccccCCccEEEecceeeccCCCCCcccccC
Confidence 46656655 5678999999987653 2 344434433 56788876 44454443332210 01
Q ss_pred ---ccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC---------------CCeEEEEcC-----
Q 020019 122 ---KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT---------------GSKIWKVGV----- 178 (332)
Q Consensus 122 ---~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~---------------~~~I~~v~~----- 178 (332)
+.+....+|.++-++.+.+.++ ..+..+..|++|..-++.+. ...+..++-
T Consensus 212 ~~~~y~~f~~iD~~tm~v~~Qv~v~------gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~ 285 (638)
T 3sbq_A 212 DENSYTMYNAIDAETMEMAFQVIVD------GNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEA 285 (638)
T ss_dssp STTEEEEEEEEETTTCSEEEEEEES------SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHH
T ss_pred ChhhceEEEEEcCCccEEEEEEEcC------CChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHH
Confidence 1122335687777776555552 24566788999875554322 123334331
Q ss_pred ---CCceEEE-------ecCCC----CC-CcccccCccccCeEEEccCc-eEEEEeCCCCeEEEEeCCC------CCC--
Q 020019 179 ---KGEFLSI-------ISSPL----FT-PKEWYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKIDIVD------GVG-- 234 (332)
Q Consensus 179 ---~g~~~~~-------~~~~~----~~-~p~~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id~~~------~~~-- 234 (332)
+|+.... ++... .. --..+|....|.|+-++||| +++++.-.+.++..++.+. .+.
T Consensus 286 ~vk~G~~~~~~g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~ 365 (638)
T 3sbq_A 286 AVKAGDFITLGDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLAD 365 (638)
T ss_dssp HHHTTCCBCCTTCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSC
T ss_pred HHhcCCeEEECCCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccC
Confidence 2332211 10000 00 00012345689999999999 9999999999998888773 111
Q ss_pred -ccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeC
Q 020019 235 -EGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGN 268 (332)
Q Consensus 235 -~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~ 268 (332)
+...+..+++ .-+|--.++|++|+.|.+-.
T Consensus 366 ~~~~~~ae~e~----GlGPlHt~Fd~~G~aYTtlf 396 (638)
T 3sbq_A 366 PRDVIVGEPEL----GLGPLHTTFDGRGNAYTTLF 396 (638)
T ss_dssp GGGGEEECCBC----CSCEEEEEECSSSEEEEEET
T ss_pred cccceEeeccC----CCcccEEEECCCCceEeeee
Confidence 0111211221 14788999999999999963
No 317
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.47 E-value=0.74 Score=45.74 Aligned_cols=156 Identities=12% Similarity=0.119 Sum_probs=86.9
Q ss_pred cceEEcCCCCEEEEE-e---cCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCcc
Q 020019 48 ECAKWDDSGRRFIVS-F---LDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKY 123 (332)
Q Consensus 48 egia~d~~g~~~~~~-~---~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~ 123 (332)
.++.+++||+.++.. . ...+|+.++.+++.. +...+.. .. . ..... ++++.+++|+..+... ..
T Consensus 237 ~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~-----~~~~l~~-~~-~--~~~~~-~~~~g~~l~~~t~~~~--~~ 304 (693)
T 3iuj_A 237 VGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA-----PLLTVQG-DL-D--ADVSL-VDNKGSTLYLLTNRDA--PN 304 (693)
T ss_dssp EEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC-----CCEEEEC-SS-S--SCEEE-EEEETTEEEEEECTTC--TT
T ss_pred EEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC-----ceEEEeC-CC-C--ceEEE-EeccCCEEEEEECCCC--CC
Confidence 367899999866544 2 235899999876531 1112322 11 1 11122 3444478888765321 24
Q ss_pred ceEEEEECCCCcE---EEEEecCCCCCCCCCccceEECCCCc-EEEEeCCC--CeEEEEcCCCceEEEecCCCCCCcccc
Q 020019 124 SAVAAYDLSTWNR---LFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTG--SKIWKVGVKGEFLSIISSPLFTPKEWY 197 (332)
Q Consensus 124 ~~l~~~d~~~g~~---~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~--~~I~~v~~~g~~~~~~~~~~~~~p~~~ 197 (332)
.+|+.+|+++++. ...+. .. .... .+.++|+ |+++.... ..|+.++.+|+....+..+.
T Consensus 305 ~~l~~~d~~~~~~~~~~~l~~----~~-~~~~---~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~------- 369 (693)
T 3iuj_A 305 RRLVTVDAANPGPAHWRDLIP----ER-QQVL---TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPG------- 369 (693)
T ss_dssp CEEEEEETTSCCGGGCEEEEC----CC-SSCE---EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSS-------
T ss_pred CEEEEEeCCCCCccccEEEec----CC-CCEE---EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCC-------
Confidence 6799999987653 22221 11 1122 4555554 65554433 47899998877554432111
Q ss_pred cCccccCeEEEccCc-eEEEEeCC---CCeEEEEeCCCC
Q 020019 198 KNLVGLNGIVYHPDG-FLIVIHTF---SGNLFKIDIVDG 232 (332)
Q Consensus 198 ~~~~~~nGi~~~~dG-~Lyva~~~---~~~i~~id~~~~ 232 (332)
.....++.+++|+ .|++.-.. .++|+++++.++
T Consensus 370 --~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 370 --LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp --SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred --CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 1122355567787 77766432 378999999876
No 318
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.36 E-value=1.8 Score=42.57 Aligned_cols=120 Identities=10% Similarity=0.046 Sum_probs=70.2
Q ss_pred cccceEEcC-CCCEEEEE-ecC----------CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEE
Q 020019 46 FRECAKWDD-SGRRFIVS-FLD----------GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLV 113 (332)
Q Consensus 46 ~pegia~d~-~g~~~~~~-~~~----------g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v 113 (332)
.+...++.+ +|++|+.. ... ..++++|+.++++. .+...|........+.++..+ |+||+
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~-------~~~~~~~~~~~~~~~~~~~~~-g~lyv 258 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS-------DRTVTVTKHDMFCPGISMDGN-GQIVV 258 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBC-------CCEEEECSCCCSSCEEEECTT-SCEEE
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEE-------eCcccCCCCCCccccccCCCC-CCEEE
Confidence 455777777 78888765 211 15889999877652 111111111112345666664 89999
Q ss_pred EEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC------CCCeEEEEcCCCc
Q 020019 114 VAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV------TGSKIWKVGVKGE 181 (332)
Q Consensus 114 ~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~------~~~~I~~v~~~g~ 181 (332)
..+.. ...+.+||+++++......++ . ...-..+++-++|+||+.-. ....++++|+...
T Consensus 259 ~GG~~----~~~v~~yd~~t~~W~~~~~~~--~--~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 259 TGGND----AKKTSLYDSSSDSWIPGPDMQ--V--ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp ECSSS----TTCEEEEEGGGTEEEECCCCS--S--CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred eCCCC----CCceEEecCcCCceeECCCCC--c--cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 85421 236899999877544322221 1 12234566767899998643 1256888998744
No 319
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.28 E-value=1.5 Score=39.05 Aligned_cols=189 Identities=8% Similarity=0.012 Sum_probs=101.7
Q ss_pred cccceEEcCCCCEEEEEecCCeEEEEECCCCC-CCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccc
Q 020019 46 FRECAKWDDSGRRFIVSFLDGGIGQVAVPDDY-PPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYS 124 (332)
Q Consensus 46 ~pegia~d~~g~~~~~~~~~g~I~~vd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~ 124 (332)
...++.+.+++..|++.. .|.|++-. +.++ + + ..............+|.+++ +++|++.. .+
T Consensus 37 ~~~~v~~~~~~~~~~~G~-~g~i~~s~-DgG~tW-----~--~~~~~~~~~~~~~~~i~~~~--~~~~~~g~------~g 99 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVGV-NATLMETR-DGGQTW-----E--PRTLVLDHSDYRFNSVSFQG--NEGWIVGE------PP 99 (327)
T ss_dssp CEEEEEESSSSCEEEEET-TTEEEEES-STTSSC-----E--ECCCCCSCCCCEEEEEEEET--TEEEEEEE------TT
T ss_pred cEEEEEECCCCcEEEEcC-CCeEEEeC-CCCCCC-----e--ECCCCCCCCCccEEEEEecC--CeEEEEEC------CC
Confidence 556788877788787543 56777653 4443 2 1 11100001112457888885 68888753 23
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCceEEEecCCCCCCcccccCccccC
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLN 204 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~n 204 (332)
.|++ ..+.|+-....... ......+.++++.+++++|+... .+.|++-+-.|+.=.....+. .....
T Consensus 100 ~i~~-S~DgG~tW~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~~---------~~~~~ 166 (327)
T 2xbg_A 100 IMLH-TTDGGQSWSQIPLD--PKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALVQEA---------IGVMR 166 (327)
T ss_dssp EEEE-ESSTTSSCEECCCC--TTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEECSC---------CCCEE
T ss_pred eEEE-ECCCCCCceECccc--cCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEeecCC---------CcceE
Confidence 4543 33334422222211 10012356787777788887654 567888665565322222111 12346
Q ss_pred eEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEEecCCCCCCCCeEEEeCCCeEEEEeCCce
Q 020019 205 GIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSFGDGLELLSPTKLVVAGNPSA 271 (332)
Q Consensus 205 Gi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~pdGi~~~~dG~l~va~~~~~ 271 (332)
++++++++.+|+... .+.+++-+-..+. .-+.+..+ .-.....++++++|++|++.....
T Consensus 167 ~~~~~~~~~~~~~g~-~G~~~~S~d~gG~----tW~~~~~~--~~~~~~~~~~~~~g~~~~~~~~G~ 226 (327)
T 2xbg_A 167 NLNRSPSGEYVAVSS-RGSFYSTWEPGQT----AWEPHNRT--TSRRLHNMGFTPDGRLWMIVNGGK 226 (327)
T ss_dssp EEEECTTSCEEEEET-TSSEEEEECTTCS----SCEEEECC--SSSCEEEEEECTTSCEEEEETTTE
T ss_pred EEEEcCCCcEEEEEC-CCcEEEEeCCCCC----ceeECCCC--CCCccceeEECCCCCEEEEeCCce
Confidence 889999887776543 5668776432231 22223322 113445788888999999876543
No 320
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.13 E-value=2.8 Score=41.46 Aligned_cols=120 Identities=12% Similarity=0.134 Sum_probs=66.4
Q ss_pred ccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCC-------
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVT------- 169 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~------- 169 (332)
...++.+.|+ |+..+-..+..+.....|+++|+++|+.... .+. ......+++. ||+ ||++...
T Consensus 130 ~l~~~~~SpD-g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~-----~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 130 ALDQLSFSRD-GRILAYSLSLAGSDWREIHLMDVESKQPLET-PLK-----DVKFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp EEEEEEECTT-SSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEE-----EEESCCCEEE-TTTEEEEEESSCCC----
T ss_pred EEEEEEECCC-CCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccC-----CceeccEEEe-CCCEEEEEEecCcccccc
Confidence 4568899997 6633222221112335789999999986542 221 0112346777 774 6665432
Q ss_pred -----CCeEEEEcCCC---ceEEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeCC---CCeEEEEeCCCC
Q 020019 170 -----GSKIWKVGVKG---EFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHTF---SGNLFKIDIVDG 232 (332)
Q Consensus 170 -----~~~I~~v~~~g---~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~~---~~~i~~id~~~~ 232 (332)
...|++.+... +...+...+.. ......++.+++|| .|+++... .+.||.++++++
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~-------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPA-------QHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGG-------GCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCC-------CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 24577776542 11222221110 00123478899999 77766542 358999998865
No 321
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.09 E-value=0.014 Score=53.63 Aligned_cols=141 Identities=13% Similarity=0.085 Sum_probs=60.3
Q ss_pred CCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCc
Q 020019 56 GRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWN 135 (332)
Q Consensus 56 g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~ 135 (332)
+..+|+...++.|+.+|..+++. .|....+ ......+..+ |++|++.. ..+.|+.||.++|+
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~--------~W~~~~~----~~~s~p~~~~-g~~~v~~s-----~dg~l~a~d~~tG~ 70 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSI--------KWTLKED----PVLQVPTHVE-EPAFLPDP-----NDGSLYTLGSKNNE 70 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCE--------EEEEECC----CSCCCC------CCEEECT-----TTCCEEEC-----C
T ss_pred CCEEEEEcCCCEEEEEECCCCCE--------EEEecCC----CceecceEcC-CCEEEEeC-----CCCEEEEEECCCCc
Confidence 34444554578999999888862 2321111 1111112232 66777642 13568999999888
Q ss_pred EEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCC-CceEEEecCCCCCCcccccCccccCeEEEccCc-e
Q 020019 136 RLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG-F 213 (332)
Q Consensus 136 ~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~ 213 (332)
..+.++...+. ......++..++.+|+.. ..+.|+.+|+. |+........ ..+...|++ .
T Consensus 71 ~~w~~~~~~~~---~~~~sp~~~~~~~v~~g~-~dg~v~a~D~~tG~~~w~~~~~--------------~~~~~~p~~~~ 132 (369)
T 2hz6_A 71 GLTKLPFTIPE---LVQASPCRSSDGILYMGK-KQDIWYVIDLLTGEKQQTLSSA--------------FADSLSPSTSL 132 (369)
T ss_dssp CSEECSCCHHH---HHTTCSCC-----CCCCE-EEEEEEEECCC------------------------------------
T ss_pred eeeeeeccCcc---ccccCceEecCCEEEEEe-CCCEEEEEECCCCcEEEEecCC--------------CcccccccCCE
Confidence 76554431100 000111222345677643 35789999976 6643221111 012233455 8
Q ss_pred EEEEeCCCCeEEEEeCCCCC
Q 020019 214 LIVIHTFSGNLFKIDIVDGV 233 (332)
Q Consensus 214 Lyva~~~~~~i~~id~~~~~ 233 (332)
||++.. .+.|+.+|+.+++
T Consensus 133 v~~~~~-dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 133 LYLGRT-EYTITMYDTKTRE 151 (369)
T ss_dssp EEEEEE-EEEEECCCSSSSS
T ss_pred EEEEec-CCEEEEEECCCCC
Confidence 888753 5679999988774
No 322
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.62 E-value=0.021 Score=52.53 Aligned_cols=107 Identities=21% Similarity=0.273 Sum_probs=53.7
Q ss_pred EEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcC-CC
Q 020019 102 LVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGV-KG 180 (332)
Q Consensus 102 i~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~-~g 180 (332)
.+++ ++++|++..+ +.|+.||.++|+..+.... ++. .. ..+-.+|.+|++.+..+.|+.+|. +|
T Consensus 5 P~v~--~~~v~~gs~d------g~v~a~d~~tG~~~W~~~~-~~~--~s----~p~~~~g~~~v~~s~dg~l~a~d~~tG 69 (369)
T 2hz6_A 5 VTLP--ETLLFVSTLD------GSLHAVSKRTGSIKWTLKE-DPV--LQ----VPTHVEEPAFLPDPNDGSLYTLGSKNN 69 (369)
T ss_dssp ---C--TTEEEEEETT------SEEEEEETTTCCEEEEEEC-CCS--CC----CC-----CCEEECTTTCCEEEC-----
T ss_pred Ceee--CCEEEEEcCC------CEEEEEECCCCCEEEEecC-CCc--ee----cceEcCCCEEEEeCCCCEEEEEECCCC
Confidence 3454 3899998753 5799999999999887665 221 11 122345678888888899999998 46
Q ss_pred ceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCC
Q 020019 181 EFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 181 ~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
+....+... .+. .. ....++..++.||+.. ..++|+.+|+.+|
T Consensus 70 ~~~w~~~~~---~~~----~~-~~sp~~~~~~~v~~g~-~dg~v~a~D~~tG 112 (369)
T 2hz6_A 70 EGLTKLPFT---IPE----LV-QASPCRSSDGILYMGK-KQDIWYVIDLLTG 112 (369)
T ss_dssp CCSEECSCC---HHH----HH-TTCSCC-----CCCCE-EEEEEEEECCC--
T ss_pred ceeeeeecc---Ccc----cc-ccCceEecCCEEEEEe-CCCEEEEEECCCC
Confidence 643222111 000 00 0011122345777654 3567888888877
No 323
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.22 E-value=3.1 Score=37.72 Aligned_cols=155 Identities=11% Similarity=0.082 Sum_probs=83.7
Q ss_pred EEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCC--CccceEEEeC--------CCCeEEEEEeCcCCCccceEEE
Q 020019 59 FIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTG--NGSLGLVLDH--------PRNRLLVVAADVFGNKYSAVAA 128 (332)
Q Consensus 59 ~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~gi~vd~--------~~g~l~v~~~~~~~~~~~~l~~ 128 (332)
+.+...+++|..++..+++. .. ..... .+.| ..++.+++.| + ++++++..+ .+.+.+
T Consensus 104 las~~~d~~v~lw~~~~~~~----~~-~~~~~--~~~gH~~~v~~v~~~p~~~~~~~~d-~~~las~s~-----D~tv~~ 170 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNETI----IT-QHVLG--GKSGHHNFVNDIDIADVYSADNRLA-EQVIASVGD-----DCTLII 170 (393)
T ss_dssp EEEEETTSCEEEEEEETTEE----EE-EEEEC--TTTSCSSCEEEEEEEEEECTTCSEE-EEEEEEEET-----TSEEEE
T ss_pred EEEEeCCCcEEEEECCCCcc----ce-eeeec--ccCCCCCceEEEEEccccccccCCC-CCEEEEEEC-----CCeEEE
Confidence 33346678888887765542 11 01111 1222 2568888875 3 676666543 456889
Q ss_pred EECCCCcEEEE-EecCCCCCCCCCccceEECCCC-cEEEEeCCCCeEEEEcCCC-ceEEEe-cCCCCC-----C----cc
Q 020019 129 YDLSTWNRLFL-TQLSGPSDGKSCADDVTVDAEG-NAYVTDVTGSKIWKVGVKG-EFLSII-SSPLFT-----P----KE 195 (332)
Q Consensus 129 ~d~~~g~~~~~-~~l~~~~~~~~~~ndiavd~dG-~lyvtd~~~~~I~~v~~~g-~~~~~~-~~~~~~-----~----p~ 195 (332)
||.+++..... ... ......+++.|++ +++++-+..+.|..+|... +..... ...... . +.
T Consensus 171 Wd~~~~~~~~~~~~~------~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 171 WRLTDEGPILAGYPL------SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp EEEETTEEEEEEEEC------SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGG
T ss_pred EECCCCceeeeecCC------CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccc
Confidence 99877654332 222 2345679999987 5777777888888888652 221110 000000 0 00
Q ss_pred -----cccCccccCeEEEc-cCceEEEEeCCCCeEEEEeCCCC
Q 020019 196 -----WYKNLVGLNGIVYH-PDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 196 -----~~~~~~~~nGi~~~-~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
..........+.+. +||...++-...+++..+++..+
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp C------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred eeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 00112335667776 78855566677788877777644
No 324
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.34 E-value=0.12 Score=50.04 Aligned_cols=136 Identities=8% Similarity=-0.037 Sum_probs=81.8
Q ss_pred eEEEEECCC----C-cEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCCCCeEEEEcCCCceEEEecCCCCCCcc---
Q 020019 125 AVAAYDLST----W-NRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVTGSKIWKVGVKGEFLSIISSPLFTPKE--- 195 (332)
Q Consensus 125 ~l~~~d~~~----g-~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~~~~I~~v~~~g~~~~~~~~~~~~~p~--- 195 (332)
.+.++|.+. + .....++. ...|+|+-++|||. +|++.-....+..++.+ +...++....+ .|.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~------pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~-k~~~~~~~k~~-~~~~~~ 370 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPV------PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAID-KLPDLFAGKLA-DPRDVI 370 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEE------SSSCCCEEECTTSCEEEEECTTSSBEEEEEGG-GHHHHHTTCCS-CGGGGE
T ss_pred CeeEEccccccccCCceEEEEeC------CCCCcceeeCCCCCEEEEcCCCCCeEEEEEee-hhhhhhhcccc-Ccccce
Confidence 455667654 2 23333433 26799999999996 78888888888888755 11111111000 000
Q ss_pred --cccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCC------CCccceeEEEEecCC--CCCCCCeEEEeCCCeEEE
Q 020019 196 --WYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDG------VGEGEEIKLIRVAGG--PLSFGDGLELLSPTKLVV 265 (332)
Q Consensus 196 --~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~------~~~~~~~~~v~~~g~--~~~~pdGi~~~~dG~l~v 265 (332)
..+...+|--.+|+++|..|.+-.-..+|.+++.+.. .--...+..+.+.=+ ++..+.|=..++||+.++
T Consensus 371 ~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv 450 (638)
T 3sbq_A 371 VGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLV 450 (638)
T ss_dssp EECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEE
T ss_pred EeeccCCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEE
Confidence 1123467889999999999999999999999887631 100113444543200 122334445578899888
Q ss_pred EeC
Q 020019 266 AGN 268 (332)
Q Consensus 266 a~~ 268 (332)
+-|
T Consensus 451 ~ln 453 (638)
T 3sbq_A 451 ALS 453 (638)
T ss_dssp EEE
T ss_pred Eec
Confidence 853
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.16 E-value=3.9 Score=35.46 Aligned_cols=219 Identities=11% Similarity=0.007 Sum_probs=108.4
Q ss_pred CCEEEEE--ecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCC
Q 020019 56 GRRFIVS--FLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLST 133 (332)
Q Consensus 56 g~~~~~~--~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~ 133 (332)
+.+|+.. .....++++|+.+.++ + .+...|. ...-..+++. +++||+..+.. ......+.+||+.+
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W-----~--~~~~~p~--~r~~~~~~~~--~~~lyv~GG~~-~~~~~~~~~~d~~~ 79 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSW-----T--DIRCPFE--KRRDAACVFW--DNVVYILGGSQ-LFPIKRMDCYNVVK 79 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEE-----E--ECCCCSC--CCBSCEEEEE--TTEEEEECCBS-SSBCCEEEEEETTT
T ss_pred ceEEEEeCCCCCceEEEecCCCCCE-----e--cCCCCCc--ccceeEEEEE--CCEEEEEeCCC-CCCcceEEEEeCCC
Confidence 3455444 2246799999887654 1 1211121 1223344444 37899885432 12346789999998
Q ss_pred CcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC------CCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEE
Q 020019 134 WNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV------TGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIV 207 (332)
Q Consensus 134 g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~------~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~ 207 (332)
++......++ . .... ..+++- ++.||+.-- ....++++|+....-..+ +.++.|. .-...+
T Consensus 80 ~~W~~~~~~p--~-~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r------~~~~~~ 146 (306)
T 3ii7_A 80 DSWYSKLGPP--T-PRDS-LAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTESWHTK--PSMLTQR------CSHGMV 146 (306)
T ss_dssp TEEEEEECCS--S-CCBS-CEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE--CCCSSCC------BSCEEE
T ss_pred CeEEECCCCC--c-cccc-eeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC--CCCcCCc------ceeEEE
Confidence 7765544442 1 1122 223322 567998532 246799999875432222 1222111 122333
Q ss_pred EccCceEEEEeCC---------CCeEEEEeCCCCCCccceeEEEEecCCCCCC-CCeEEEeCCCeEEEEeCC-------c
Q 020019 208 YHPDGFLIVIHTF---------SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSF-GDGLELLSPTKLVVAGNP-------S 270 (332)
Q Consensus 208 ~~~dG~Lyva~~~---------~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~-pdGi~~~~dG~l~va~~~-------~ 270 (332)
.. ++.||+.-.. .+.++++|+.+. .-+.+... +.+. -..+++- +++||+.+.. .
T Consensus 147 ~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~-----~W~~~~~~--p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~ 217 (306)
T 3ii7_A 147 EA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATE-----TWTELCPM--IEARKNHGLVFV-KDKIFAVGGQNGLGGLDN 217 (306)
T ss_dssp EE-TTEEEEECCEESCTTTCEECCCEEEEETTTT-----EEEEECCC--SSCCBSCEEEEE-TTEEEEECCEETTEEBCC
T ss_pred EE-CCEEEEECCCCCCCCcccccceEEEeCCCCC-----eEEECCCc--cchhhcceEEEE-CCEEEEEeCCCCCCCCce
Confidence 32 6688886431 466899999876 23323211 1111 2234343 6899999521 1
Q ss_pred eEEEEcCCCceEEEEEeeecCCCcccceEEEEECCeEEEEEe
Q 020019 271 ARLVESSDGWETAAVVAKFSGPVHRLATAATVKDGRVYLNHM 312 (332)
Q Consensus 271 ~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~~~g~lyv~~~ 312 (332)
........+ +....-..|..+.-.+++..+++|||...
T Consensus 218 ~~~yd~~~~----~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 255 (306)
T 3ii7_A 218 VEYYDIKLN----EWKMVSPMPWKGVTVKCAAVGSIVYVLAG 255 (306)
T ss_dssp EEEEETTTT----EEEECCCCSCCBSCCEEEEETTEEEEEEC
T ss_pred EEEeeCCCC----cEEECCCCCCCccceeEEEECCEEEEEeC
Confidence 233333333 22221111222222334446899998544
No 326
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.81 E-value=5.5 Score=36.18 Aligned_cols=168 Identities=10% Similarity=0.041 Sum_probs=86.3
Q ss_pred ccccceEEcC--CCCEEEEEecCC----eEEEEECCCCCCCccceeeeEEecccCcC---C-------CccceEEEeCC-
Q 020019 45 FFRECAKWDD--SGRRFIVSFLDG----GIGQVAVPDDYPPGTVLEEVTLVKDLELT---G-------NGSLGLVLDHP- 107 (332)
Q Consensus 45 ~~pegia~d~--~g~~~~~~~~~g----~I~~vd~~~~~~~~~~~~~~~~~~~~~~~---~-------~~~~gi~vd~~- 107 (332)
...+.|++|+ .+++|++.. .| .|++-+..+..+ + .+...+++. + .....|++++.
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~-~g~~g~gl~~s~D~G~tW-----~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 126 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAAR-TGHLGPTVFRSDDGGGNW-----T--EATRPPAFNKAPEGETGRVVDHVFWLTPGHAS 126 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEE-C--CCEEEEEESSTTSCC-----E--ECSBCCCCCCCC----CCCCCEEEEEEECCTT
T ss_pred CceEEEEECCCCCCeEEEEec-CCCCCccEEEeCCCCCCc-----e--ECCccccCCCcccccccccccceeEEEeCCCC
Confidence 3567899998 677887653 24 688865433333 1 111111111 0 13456888862
Q ss_pred -CCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecC-CCC------------CCCCCccceEECCC--CcEEEEeCCCC
Q 020019 108 -RNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLS-GPS------------DGKSCADDVTVDAE--GNAYVTDVTGS 171 (332)
Q Consensus 108 -~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~-~~~------------~~~~~~ndiavd~d--G~lyvtd~~~~ 171 (332)
.++||++... +.|++.+-..........+. .|. ........|++|+. +++|+.... +
T Consensus 127 ~~~~l~~g~~~------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-g 199 (394)
T 3b7f_A 127 EPGTWYAGTSP------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-G 199 (394)
T ss_dssp STTCEEEEEET------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-B
T ss_pred CCCEEEEEecC------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-C
Confidence 3889998642 45776643322222211110 010 00123457999973 579987543 5
Q ss_pred eEEEEcCCCceEEEecCC---CCCCcccccC-ccccCeEEEccC--ceEEEEeCCCCeEEEEeCC
Q 020019 172 KIWKVGVKGEFLSIISSP---LFTPKEWYKN-LVGLNGIVYHPD--GFLIVIHTFSGNLFKIDIV 230 (332)
Q Consensus 172 ~I~~v~~~g~~~~~~~~~---~~~~p~~~~~-~~~~nGi~~~~d--G~Lyva~~~~~~i~~id~~ 230 (332)
.|++.+..|+.-...... .+. |..... ......|+++++ +.||++.. +.|++.+-.
T Consensus 200 gl~~s~DgG~tW~~~~~~~~~~~~-p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--~gl~~s~D~ 261 (394)
T 3b7f_A 200 GVFESTDAGTDWKPLNRGCAANFL-PDPNVEFGHDPHCVVQHPAAPDILYQQNH--CGIYRMDRR 261 (394)
T ss_dssp EEEEESSTTSSCEECCTTCCCTTS-SSSSSSSCBCEEEEEECSSSTTEEEEEET--TEEEEEETT
T ss_pred CEEEECCCCCCceECCCCcccccc-CCCccccCcceeEEEECCCCCCEEEEEcC--CeEEEeCCC
Confidence 688887777642222111 000 100000 012467889887 58999763 458877533
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.45 E-value=5.1 Score=34.91 Aligned_cols=220 Identities=14% Similarity=0.061 Sum_probs=105.4
Q ss_pred CCCEEEEE-e---cCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeC----cCCCccceE
Q 020019 55 SGRRFIVS-F---LDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAAD----VFGNKYSAV 126 (332)
Q Consensus 55 ~g~~~~~~-~---~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~----~~~~~~~~l 126 (332)
++.+|+.. . ....++++|+.+.++ . .+...|. ...-.++++. +++||+..+. ......+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W-----~--~~~~~p~--~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 92 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTW-----L--RLADLQV--PRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSAL 92 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEE-----E--ECCCCSS--CCBSCEEEEE--TTEEEEECCEEEETTEEEECCCE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeE-----e--ECCCCCc--ccccceEEEE--CCEEEEECCCcCCCCCCeecceE
Confidence 34566544 2 124689999886654 1 1211121 1222345554 3789988432 111123468
Q ss_pred EEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC-----CCCeEEEEcCCCceEEEecCCCCCCcccccCcc
Q 020019 127 AAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV-----TGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 127 ~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~-----~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~ 201 (332)
.+||+.+++......++ . .... ..+++ -+|.||+.-- ....++++|+....-..+ +.++.+ .
T Consensus 93 ~~~d~~~~~W~~~~~~p--~-~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~------r 159 (308)
T 1zgk_A 93 DCYNPMTNQWSPCAPMS--V-PRNR-IGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLV--APMLTR------R 159 (308)
T ss_dssp EEEETTTTEEEECCCCS--S-CCBT-CEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEEC--CCCSSC------C
T ss_pred EEECCCCCeEeECCCCC--c-Cccc-cEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeEC--CCCCcc------c
Confidence 89999887654332231 1 1122 22333 2578998621 135788999875422211 122211 1
Q ss_pred ccCeEEEccCceEEEEeCC-----CCeEEEEeCCCCCCccceeEEEEecCCCCC-CCCeEEEeCCCeEEEEeC-------
Q 020019 202 GLNGIVYHPDGFLIVIHTF-----SGNLFKIDIVDGVGEGEEIKLIRVAGGPLS-FGDGLELLSPTKLVVAGN------- 268 (332)
Q Consensus 202 ~~nGi~~~~dG~Lyva~~~-----~~~i~~id~~~~~~~~~~~~~v~~~g~~~~-~pdGi~~~~dG~l~va~~------- 268 (332)
.-...+.. ++.||+.-.. .+.++++|+.+. .-+.+.. -+.+ .--.+++- +++||+.+.
T Consensus 160 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~-----~W~~~~~--~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~ 230 (308)
T 1zgk_A 160 IGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERN-----EWRMITA--MNTIRSGAGVCVL-HNCIYAAGGYDGQDQL 230 (308)
T ss_dssp BSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTT-----EEEECCC--CSSCCBSCEEEEE-TTEEEEECCBCSSSBC
T ss_pred cceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCC-----eEeeCCC--CCCccccceEEEE-CCEEEEEeCCCCCCcc
Confidence 12233333 5688886321 356899998865 2222211 1111 11234443 689999962
Q ss_pred CceEEEEcCCCceEEEEEeeecCCCcccceEEEEECCeEEEEE
Q 020019 269 PSARLVESSDGWETAAVVAKFSGPVHRLATAATVKDGRVYLNH 311 (332)
Q Consensus 269 ~~~~~v~~~dg~~~~~~~~~~~~~~~~~pt~va~~~g~lyv~~ 311 (332)
........... +....-..+..+.-.+++..+++|||..
T Consensus 231 ~~v~~yd~~~~----~W~~~~~~p~~r~~~~~~~~~~~i~v~G 269 (308)
T 1zgk_A 231 NSVERYDVETE----TWTFVAPMKHRRSALGITVHQGRIYVLG 269 (308)
T ss_dssp CCEEEEETTTT----EEEECCCCSSCCBSCEEEEETTEEEEEC
T ss_pred ceEEEEeCCCC----cEEECCCCCCCccceEEEEECCEEEEEc
Confidence 12233333333 2222111121122234455789999853
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.39 E-value=2 Score=38.92 Aligned_cols=109 Identities=12% Similarity=0.126 Sum_probs=59.9
Q ss_pred CeEEEEEeCcCCCccceEEEEECCCCcEEEEEecC--CCCCCCCCccceEECCCCcEEEEe-CCCCeEEEEcCCCceEEE
Q 020019 109 NRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLS--GPSDGKSCADDVTVDAEGNAYVTD-VTGSKIWKVGVKGEFLSI 185 (332)
Q Consensus 109 g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~--~~~~~~~~~ndiavd~dG~lyvtd-~~~~~I~~v~~~g~~~~~ 185 (332)
|.+||...+ +.|+.+|.++|+..+.++.. .|.-....+ +...+|.+|+.+ +..|.||.++.......+
T Consensus 11 ~~V~v~t~d------G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~---~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 11 DILIAADVE------GGLHAVDRRNGHIIWSIEPENFQPLIEIQEP---SRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEEETT------SCEEEEETTTTEEEEEECGGGSCCSEECCCS---CTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred CEEEEEeCC------CeEEEEECCCCcEEEEecCCccCCcEEecCC---ccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 678888764 57999999999998887663 121000001 011345688887 578999999966322222
Q ss_pred -ecCCCC--CCcccccCccccCeEEE------ccCceEEEEeCCCCeEEEEeCCCC
Q 020019 186 -ISSPLF--TPKEWYKNLVGLNGIVY------HPDGFLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 186 -~~~~~~--~~p~~~~~~~~~nGi~~------~~dG~Lyva~~~~~~i~~id~~~~ 232 (332)
...+.+ ..| ........+ +.+|.+|+... +++++.+++.+|
T Consensus 82 ~~~~~~lv~~SP-----~~~~~~pvv~~~~~~~~~g~Vy~Gs~-~g~l~ald~~tG 131 (339)
T 2be1_A 82 PLSIRQLVSTSP-----LHLKTNIVVNDSGKIVEDEKVYTGSM-RTIMYTINMLNG 131 (339)
T ss_dssp EEEHHHHHTTCS-----EEEECC----------CCEEEEECEE-EEEEEEEETTTC
T ss_pred eeccccceeccc-----cccCCCceeecccccccCCEEEEEec-CCEEEEEECCCC
Confidence 110000 011 000111112 24567777654 567888888877
No 329
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=92.24 E-value=4.4 Score=40.58 Aligned_cols=117 Identities=10% Similarity=0.023 Sum_probs=67.2
Q ss_pred ccceEEc-CCCCEEE-EEecCC----eEEEEECCCC-CCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC
Q 020019 47 RECAKWD-DSGRRFI-VSFLDG----GIGQVAVPDD-YPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF 119 (332)
Q Consensus 47 pegia~d-~~g~~~~-~~~~~g----~I~~vd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~ 119 (332)
..++.++ |||+.+. +....| +|+.++..++ +. +.+ .+. . ...+++..++...|+++..+..
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~---l~~--~~~---~----~~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT---IAD--KVS---G----TNGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC---CCC--CEE---E----ECSCCEECSSTTEEEEEEECTT
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe---CCc--ccc---C----ceeeEEEecCCCEEEEEEECCC
Confidence 3457899 9998554 433233 4999999877 52 111 111 0 1246778887446666654321
Q ss_pred CCccceEEEEECCCCcE--EEEEecCCCCCCCCCccceEECCCCc-EEEEeC--CCCeEEEEcCCC
Q 020019 120 GNKYSAVAAYDLSTWNR--LFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDV--TGSKIWKVGVKG 180 (332)
Q Consensus 120 ~~~~~~l~~~d~~~g~~--~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~--~~~~I~~v~~~g 180 (332)
.....|+.+++.+++. ...+.-. . ..+..++.+.+||+ |+++.. ....||.++.++
T Consensus 244 -~~~~~v~~~~lgt~~~~~~lv~~~~--~--~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 244 -LRENKVWRHVMGKLQSEDVCLYEEH--N--PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp -CCEEEEEEEETTSCGGGCEEEEECC--C--TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred -CCCCEEEEEECCCCchhcEEEEecC--C--CceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 1224788899877642 2222221 1 23445788999996 555432 345788888764
No 330
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.49 E-value=7.9 Score=33.33 Aligned_cols=169 Identities=14% Similarity=0.093 Sum_probs=85.8
Q ss_pred CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCc---EEEEEec
Q 020019 66 GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWN---RLFLTQL 142 (332)
Q Consensus 66 g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~---~~~~~~l 142 (332)
..++++|+.+.++ + .+...|. ...-.++++.. ++||+..+.........+++||+.+++ ......+
T Consensus 31 ~~~~~~d~~~~~W-----~--~~~~~p~--~r~~~~~~~~~--~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~ 99 (301)
T 2vpj_A 31 DVVEKYDPKTQEW-----S--FLPSITR--KRRYVASVSLH--DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM 99 (301)
T ss_dssp CCEEEEETTTTEE-----E--ECCCCSS--CCBSCEEEEET--TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC
T ss_pred eEEEEEcCCCCeE-----E--eCCCCCh--hhccccEEEEC--CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC
Confidence 4689999876653 1 1211121 12223444442 788987542211234568999998877 5443333
Q ss_pred CCCCCCCCCccceEECCCCcEEEEeC-----CCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCceEEEE
Q 020019 143 SGPSDGKSCADDVTVDAEGNAYVTDV-----TGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVI 217 (332)
Q Consensus 143 ~~~~~~~~~~ndiavd~dG~lyvtd~-----~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva 217 (332)
+ . .... ..+++. ++.+|+.-- ....++++|+....-..+. .++.+ ......+.. ++.||+.
T Consensus 100 p--~-~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~------r~~~~~~~~-~~~iyv~ 165 (301)
T 2vpj_A 100 N--V-RRGL-AGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG--DMQTA------REGAGLVVA-SGVIYCL 165 (301)
T ss_dssp S--S-CCBS-CEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE--ECSSC------CBSCEEEEE-TTEEEEE
T ss_pred C--C-Cccc-eeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECC--CCCCC------cccceEEEE-CCEEEEE
Confidence 2 1 1122 223332 578998632 1357999998754222111 11111 112233333 6788886
Q ss_pred eC-----CCCeEEEEeCCCCCCccceeEEEEecCCCCCC-CCeEEEeCCCeEEEEe
Q 020019 218 HT-----FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSF-GDGLELLSPTKLVVAG 267 (332)
Q Consensus 218 ~~-----~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~-pdGi~~~~dG~l~va~ 267 (332)
-. ..+.++++|+.+. .-+.+.. -+.+. -..+++ -+++||+.+
T Consensus 166 GG~~~~~~~~~~~~~d~~~~-----~W~~~~~--~p~~r~~~~~~~-~~~~i~v~G 213 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPHTG-----HWTNVTP--MATKRSGAGVAL-LNDHIYVVG 213 (301)
T ss_dssp CCBCSSCBCCCEEEEETTTT-----EEEEECC--CSSCCBSCEEEE-ETTEEEEEC
T ss_pred CCCCCCcccceEEEEeCCCC-----cEEeCCC--CCcccccceEEE-ECCEEEEEe
Confidence 32 2456899999876 2333321 11111 123333 368999996
No 331
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=89.35 E-value=12 Score=33.81 Aligned_cols=110 Identities=12% Similarity=0.059 Sum_probs=59.3
Q ss_pred EeCCCCeEEEEEeCcCCCccceEEEEECCC-C-cEEEEE-ecCCCCCCCCCccceEECC--CCcEEEEeCCC---CeEEE
Q 020019 104 LDHPRNRLLVVAADVFGNKYSAVAAYDLST-W-NRLFLT-QLSGPSDGKSCADDVTVDA--EGNAYVTDVTG---SKIWK 175 (332)
Q Consensus 104 vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~-g-~~~~~~-~l~~~~~~~~~~ndiavd~--dG~lyvtd~~~---~~I~~ 175 (332)
.|.+ ++||+... ..+++++... + +..... .+ .......|++|| ++++|+.-... ..|++
T Consensus 19 ~d~~-g~l~vgt~-------~Gl~~~~~~~~g~~W~~~~~~~-----~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~ 85 (394)
T 3b7f_A 19 ESGP-VMLLVATI-------KGAWFLASDPARRTWELRGPVF-----LGHTIHHIVQDPREPERMLMAARTGHLGPTVFR 85 (394)
T ss_dssp CCSC-CEEEEEET-------TEEEEEEECTTSCSEEEEEEES-----TTSEEEEEEECSSSTTCEEEEEEC--CCEEEEE
T ss_pred CCCC-CEEEEEec-------CceEEEECCCCCCCceECCccC-----CCCceEEEEECCCCCCeEEEEecCCCCCccEEE
Confidence 3554 89999874 2366666543 2 232211 12 124577899999 67899875432 17888
Q ss_pred EcCCCceEEEecCC-CCCCccccc----CccccCeEEEcc---CceEEEEeCCCCeEEEEe
Q 020019 176 VGVKGEFLSIISSP-LFTPKEWYK----NLVGLNGIVYHP---DGFLIVIHTFSGNLFKID 228 (332)
Q Consensus 176 v~~~g~~~~~~~~~-~~~~p~~~~----~~~~~nGi~~~~---dG~Lyva~~~~~~i~~id 228 (332)
.+..|+.-..+..+ .+.... .. .......|++++ .+.||+... .+.|+|-+
T Consensus 86 s~D~G~tW~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-~ggl~~S~ 144 (394)
T 3b7f_A 86 SDDGGGNWTEATRPPAFNKAP-EGETGRVVDHVFWLTPGHASEPGTWYAGTS-PQGLFRST 144 (394)
T ss_dssp ESSTTSCCEECSBCCCCCCCC-----CCCCCEEEEEEECCTTSTTCEEEEEE-TTEEEEES
T ss_pred eCCCCCCceECCccccCCCcc-cccccccccceeEEEeCCCCCCCEEEEEec-CCcEEEEc
Confidence 87667632222211 111000 00 001234678885 458998754 45688764
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.40 E-value=12 Score=32.52 Aligned_cols=170 Identities=12% Similarity=-0.035 Sum_probs=84.8
Q ss_pred CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeC-----cCC-CccceEEEEECCCCcEEEE
Q 020019 66 GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAAD-----VFG-NKYSAVAAYDLSTWNRLFL 139 (332)
Q Consensus 66 g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~-----~~~-~~~~~l~~~d~~~g~~~~~ 139 (332)
..++.+|+.++++ .....|......-.++++. +++||+..+. ... .....+.+||+.+++....
T Consensus 13 ~~~~~yd~~~~~W--------~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 13 EGAVAYDPAANEC--------YCASLSSQVPKNHVSLVTK--ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp TEEEEEETTTTEE--------EEEECCCCSCSSEEEEECT--TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred CceEEECCCCCeE--------ecCCCCCCCCccceEEEEE--CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 6799999987654 1121121111222344443 3789988652 111 1123488999998765433
Q ss_pred EecCCCCCCCCCccceEECCCCcEEEEeC--------CCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccC
Q 020019 140 TQLSGPSDGKSCADDVTVDAEGNAYVTDV--------TGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPD 211 (332)
Q Consensus 140 ~~l~~~~~~~~~~ndiavd~dG~lyvtd~--------~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~d 211 (332)
..++ . ......+++. ++.||+.-- ....++++|+....=... +.++.| ..-...+. -+
T Consensus 83 ~~~p--~--~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~------r~~~~~~~-~~ 148 (315)
T 4asc_A 83 PPLP--S--PRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGES--DPLPYV------VYGHTVLS-HM 148 (315)
T ss_dssp CCBS--S--CEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEEC--CCCSSC------CBSCEEEE-ET
T ss_pred CCCC--c--chhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeEC--CCCCCc------ccceeEEE-EC
Confidence 2231 1 1112233333 567888522 235689999875421111 222211 11223333 35
Q ss_pred ceEEEEeCC------CCeEEEEeCCCCCCccceeEEEEecCCCCCC-CCeEEEeCCCeEEEEe
Q 020019 212 GFLIVIHTF------SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSF-GDGLELLSPTKLVVAG 267 (332)
Q Consensus 212 G~Lyva~~~------~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~-pdGi~~~~dG~l~va~ 267 (332)
+.||+.-.. .+.++++|+.+. .=+.+.. -+.+. -..+++ -+++||+.+
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~-----~W~~~~~--~p~~r~~~~~~~-~~~~iyv~G 203 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKKF-----EWKELAP--MQTARSLFGATV-HDGRIIVAA 203 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTTT-----EEEECCC--CSSCCBSCEEEE-ETTEEEEEE
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCCC-----eEEECCC--CCCchhceEEEE-ECCEEEEEe
Confidence 678886432 356899998865 2222211 11111 123333 368999995
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=87.88 E-value=14 Score=32.68 Aligned_cols=99 Identities=14% Similarity=0.073 Sum_probs=52.0
Q ss_pred CCCEEEEE-ecCCeEEEEECCCCCCCccceeeeEEecccCcC--CCccceEEEeCCCCeEEEEEeC-c--C--CCccceE
Q 020019 55 SGRRFIVS-FLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELT--GNGSLGLVLDHPRNRLLVVAAD-V--F--GNKYSAV 126 (332)
Q Consensus 55 ~g~~~~~~-~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~gi~vd~~~g~l~v~~~~-~--~--~~~~~~l 126 (332)
++.+|+.. .....++++|+...+. +|..-+.++ ...-.++++-. ++|||..+. . . ....+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~--------~W~~~~~~p~~~R~~~~~~~~~--~~lyv~GG~~~~~~~~~~~~~~v 88 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDK--------KWTALAAFPGGPRDQATSAFID--GNLYVFGGIGKNSEGLTQVFNDV 88 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSC--------CEEECCCCTTCCCBSCEEEEET--TEEEEECCEEECTTSCEEECCCE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCC--------CeeECCCCCCCcCccceEEEEC--CEEEEEcCCCCCCCccceeeccE
Confidence 56777766 5566899999874211 233222222 12334455543 789997532 1 0 0123568
Q ss_pred EEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEe
Q 020019 127 AAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTD 167 (332)
Q Consensus 127 ~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd 167 (332)
.+||+++.+......+. |. ......+++ -++.||+.-
T Consensus 89 ~~yd~~~~~W~~~~~~~-p~--~r~~~~~~~-~~~~iyv~G 125 (357)
T 2uvk_A 89 HKYNPKTNSWVKLMSHA-PM--GMAGHVTFV-HNGKAYVTG 125 (357)
T ss_dssp EEEETTTTEEEECSCCC-SS--CCSSEEEEE-ETTEEEEEE
T ss_pred EEEeCCCCcEEECCCCC-Cc--ccccceEEE-ECCEEEEEe
Confidence 99999887654332221 11 112223344 567899854
No 334
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=86.68 E-value=15 Score=33.12 Aligned_cols=71 Identities=24% Similarity=0.431 Sum_probs=49.7
Q ss_pred cCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEe--CC
Q 020019 92 LELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTD--VT 169 (332)
Q Consensus 92 ~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd--~~ 169 (332)
|+....-|..|.+.+..|.+|+... .+.++.||+++|.....-+++. + .+++|. ..
T Consensus 255 pea~~DFPVamqvs~kygviyviTK------~G~ihlyDleTgt~i~~nrIS~---------------d-~iF~ta~~~~ 312 (365)
T 2xzh_A 255 PEAQNDFPVAMQISEKHDVVFLITK------YGYIHLYDLETGTCIYMNRISG---------------E-TIFVTAPHEA 312 (365)
T ss_dssp TTCTTCCEEEEEEETTTTEEEEEET------TSEEEEEETTTCCEEEEEECCS---------------S-CEEEEEEEGG
T ss_pred ccccCCceEEEEecccCCEEEEEeC------CcEEEEEEcccCcEEEEeccCC---------------C-ceEEecccCC
Confidence 4444457999999998899999985 5789999999999887766631 1 244432 23
Q ss_pred CCeEEEEcCCCceEE
Q 020019 170 GSKIWKVGVKGEFLS 184 (332)
Q Consensus 170 ~~~I~~v~~~g~~~~ 184 (332)
.+.|..++.+|+...
T Consensus 313 ~~Gi~~Vnr~GqVl~ 327 (365)
T 2xzh_A 313 TAGIIGVNRKGQVLS 327 (365)
T ss_dssp GTEEEEEETTCEEEE
T ss_pred CCcEEEEcCCCEEEE
Confidence 456666666666543
No 335
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=85.82 E-value=30 Score=34.46 Aligned_cols=117 Identities=8% Similarity=0.048 Sum_probs=66.7
Q ss_pred ccceEEEe-CCCCe-EEEEEeCcCCCccceEEEEECCCC-cEEEEEecCCCCCCCCCccceEECCCCc-EEEEeCC-C--
Q 020019 98 GSLGLVLD-HPRNR-LLVVAADVFGNKYSAVAAYDLSTW-NRLFLTQLSGPSDGKSCADDVTVDAEGN-AYVTDVT-G-- 170 (332)
Q Consensus 98 ~~~gi~vd-~~~g~-l~v~~~~~~~~~~~~l~~~d~~~g-~~~~~~~l~~~~~~~~~~ndiavd~dG~-lyvtd~~-~-- 170 (332)
...+..+. |+ |+ |.++....+ .....|+++|+++| +... ..+. ....++++.|||+ ||++... .
T Consensus 175 ~~~~~~~S~PD-G~~lAy~~~~~G-~~~~~l~v~dl~~g~~~l~-~~~~------~~~~~~~WspDg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 175 DVMEVKPAPPE-HDLVAFSVDMSG-NEVYTIEFKRISDPSQTIA-DKVS------GTNGEIVWGPDHTSLFYVTKDETLR 245 (751)
T ss_dssp EEEEEEECTTT-TCEEEEEEESSS-SSCEEEEEEETTCTTCCCC-CCEE------EECSCCEECSSTTEEEEEEECTTCC
T ss_pred EEeeeEecCCC-CCEEEEEEeCCC-CceEEEEEEECCCCCEeCC-cccc------CceeeEEEecCCCEEEEEEECCCCC
Confidence 34568899 87 65 333332111 12346999999988 6311 0110 1134689999984 6665432 1
Q ss_pred -CeEEEEcCCCce---EEEecCCCCCCcccccCccccCeEEEccCc-eEEEEeC--CCCeEEEEeCCCC
Q 020019 171 -SKIWKVGVKGEF---LSIISSPLFTPKEWYKNLVGLNGIVYHPDG-FLIVIHT--FSGNLFKIDIVDG 232 (332)
Q Consensus 171 -~~I~~v~~~g~~---~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG-~Lyva~~--~~~~i~~id~~~~ 232 (332)
..||+++.++.. ..++..+. .....++.+++|| +|++... .+..||.++++++
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~---------~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHN---------PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCC---------TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CCEEEEEECCCCchhcEEEEecCC---------CceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 378888876431 22222110 0112478899999 7776653 3457899999865
No 336
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=85.40 E-value=17 Score=31.21 Aligned_cols=208 Identities=13% Similarity=0.131 Sum_probs=100.7
Q ss_pred CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCC
Q 020019 66 GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGP 145 (332)
Q Consensus 66 g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~ 145 (332)
..++.+|+.+.++ + .+...|. ...-.++++. +++||+..+.........+.+||+.+++......++
T Consensus 30 ~~~~~~d~~~~~W-----~--~~~~~p~--~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p-- 96 (302)
T 2xn4_A 30 RSVECYDFKEERW-----H--QVAELPS--RRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMR-- 96 (302)
T ss_dssp CCEEEEETTTTEE-----E--EECCCSS--CCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCS--
T ss_pred CcEEEEcCcCCcE-----e--EcccCCc--ccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCC--
Confidence 4688888876553 1 2211121 1222345544 378998854222123456899999987755433332
Q ss_pred CCCCCCccceEECCCCcEEEEeCC-----CCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCC
Q 020019 146 SDGKSCADDVTVDAEGNAYVTDVT-----GSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTF 220 (332)
Q Consensus 146 ~~~~~~~ndiavd~dG~lyvtd~~-----~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~ 220 (332)
. ......+++ -++.+|+.--. ...++++|+....-..+ +.++.| ......+.. ++.||+.-..
T Consensus 97 ~--~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~------r~~~~~~~~-~~~iyv~GG~ 164 (302)
T 2xn4_A 97 D--RRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV--APMNTR------RSSVGVGVV-GGLLYAVGGY 164 (302)
T ss_dssp S--CCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE--CCCSSC------CBSCEEEEE-TTEEEEECCE
T ss_pred c--cccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec--CCCCCc------ccCceEEEE-CCEEEEEeCC
Confidence 1 112223333 25678885321 24688898875422222 122211 112233333 5688886321
Q ss_pred -------CCeEEEEeCCCCCCccceeEEEE-ecCCCCCCCCeEEEeCCCeEEEEeCC-------ceEEEEcCCC-ceEEE
Q 020019 221 -------SGNLFKIDIVDGVGEGEEIKLIR-VAGGPLSFGDGLELLSPTKLVVAGNP-------SARLVESSDG-WETAA 284 (332)
Q Consensus 221 -------~~~i~~id~~~~~~~~~~~~~v~-~~g~~~~~pdGi~~~~dG~l~va~~~-------~~~~v~~~dg-~~~~~ 284 (332)
.+.++++|+.+. .-+.+. .+ .+... ..+++ -+++||+.+.. .........+ |..
T Consensus 165 ~~~~~~~~~~~~~yd~~~~-----~W~~~~~~p-~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-- 234 (302)
T 2xn4_A 165 DVASRQCLSTVECYNATTN-----EWTYIAEMS-TRRSG-AGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ-- 234 (302)
T ss_dssp ETTTTEECCCEEEEETTTT-----EEEEECCCS-SCCBS-CEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEE--
T ss_pred CCCCCccccEEEEEeCCCC-----cEEECCCCc-ccccc-ccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEee--
Confidence 356899999876 223232 11 11111 23433 36899999621 2233333333 321
Q ss_pred EEeeecCCCcccceEEEEECCeEEEEE
Q 020019 285 VVAKFSGPVHRLATAATVKDGRVYLNH 311 (332)
Q Consensus 285 ~~~~~~~~~~~~pt~va~~~g~lyv~~ 311 (332)
...+ +..+.-.+++..+++|||..
T Consensus 235 -~~~~--~~~r~~~~~~~~~~~i~v~G 258 (302)
T 2xn4_A 235 -VADM--NMCRRNAGVCAVNGLLYVVG 258 (302)
T ss_dssp -ECCC--SSCCBSCEEEEETTEEEEEC
T ss_pred -CCCC--CCccccCeEEEECCEEEEEC
Confidence 2222 21122234455789999843
No 337
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=83.75 E-value=20 Score=30.67 Aligned_cols=180 Identities=12% Similarity=0.096 Sum_probs=94.4
Q ss_pred CCCEEEEE-ec----CCeEEEEECCCCC---CCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceE
Q 020019 55 SGRRFIVS-FL----DGGIGQVAVPDDY---PPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAV 126 (332)
Q Consensus 55 ~g~~~~~~-~~----~g~I~~vd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l 126 (332)
++.+|+.. .. ...++++|+.+.+ + + .+...|. ...-.++++. +++||+..+.........+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W-----~--~~~~~p~--~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~ 130 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVW-----Y--SVAPMNV--RRGLAGATTL--GDMIYVSGGFDGSRRHTSM 130 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCC-----E--EECCCSS--CCBSCEEEEE--TTEEEEECCBCSSCBCCEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCee-----E--ECCCCCC--CccceeEEEE--CCEEEEEcccCCCcccceE
Confidence 45677654 22 2469999988776 5 1 2221121 1223344444 2889998543222224578
Q ss_pred EEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC-----CCCeEEEEcCCCceEEEecCCCCCCcccccCcc
Q 020019 127 AAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV-----TGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLV 201 (332)
Q Consensus 127 ~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~-----~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~ 201 (332)
.+||+++++......++.+ ... ..+++. ++.||+.-- ....++++|+....-..+ +.++.+ ..
T Consensus 131 ~~~d~~~~~W~~~~~~p~~---r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~-----r~ 198 (301)
T 2vpj_A 131 ERYDPNIDQWSMLGDMQTA---REG-AGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV--TPMATK-----RS 198 (301)
T ss_dssp EEEETTTTEEEEEEECSSC---CBS-CEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEE--CCCSSC-----CB
T ss_pred EEEcCCCCeEEECCCCCCC---ccc-ceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeC--CCCCcc-----cc
Confidence 9999998776655444211 122 223332 578998632 246789999875422222 122211 11
Q ss_pred ccCeEEEccCceEEEEeCC-----CCeEEEEeCCCCCCccceeEEEEecCCCCC-CCCeEEEeCCCeEEEEe
Q 020019 202 GLNGIVYHPDGFLIVIHTF-----SGNLFKIDIVDGVGEGEEIKLIRVAGGPLS-FGDGLELLSPTKLVVAG 267 (332)
Q Consensus 202 ~~nGi~~~~dG~Lyva~~~-----~~~i~~id~~~~~~~~~~~~~v~~~g~~~~-~pdGi~~~~dG~l~va~ 267 (332)
. ..++.. ++.||+.-.. .+.++++|+.+. .-+.+.. -+.+ .-.++++- +++||+.+
T Consensus 199 ~-~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~-----~W~~~~~--~p~~r~~~~~~~~-~~~i~v~G 260 (301)
T 2vpj_A 199 G-AGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTD-----SWTTVTS--MTTPRCYVGATVL-RGRLYAIA 260 (301)
T ss_dssp S-CEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT-----EEEEECC--CSSCCBSCEEEEE-TTEEEEEC
T ss_pred c-ceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCC-----cEEECCC--CCCcccceeEEEE-CCEEEEEc
Confidence 1 233332 5688886432 357899999876 2332321 1111 11234333 68899996
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=83.63 E-value=21 Score=30.91 Aligned_cols=155 Identities=15% Similarity=0.146 Sum_probs=81.2
Q ss_pred EcCCCCEEEEE-ec---CC-------eEEEEECCCCCCCccceeeeEEecccCcC-CCccceEEEeCCCCeEEEEEeCc-
Q 020019 52 WDDSGRRFIVS-FL---DG-------GIGQVAVPDDYPPGTVLEEVTLVKDLELT-GNGSLGLVLDHPRNRLLVVAADV- 118 (332)
Q Consensus 52 ~d~~g~~~~~~-~~---~g-------~I~~vd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gi~vd~~~g~l~v~~~~~- 118 (332)
+..++.+|+.. .. .+ .++++|+.+.++ ..-+.++ ...-.++++. +++||+..+..
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W----------~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 120 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW----------VGLPPLPSARCLFGLGEV--DDKIYVVAGKDL 120 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEE----------EECSCBSSCBCSCEEEEE--TTEEEEEEEEBT
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcE----------EECCCCCccccccceEEE--CCEEEEEcCccC
Confidence 34556777765 21 11 288999876653 2212222 1233455554 37999986532
Q ss_pred -CCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC------CCCeEEEEcCCCceEEEecCCCC
Q 020019 119 -FGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV------TGSKIWKVGVKGEFLSIISSPLF 191 (332)
Q Consensus 119 -~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~------~~~~I~~v~~~g~~~~~~~~~~~ 191 (332)
.......+.+||+++.+......++ . ......+++ -+|.||+.-- ....++++|+....=..+ +.+
T Consensus 121 ~~~~~~~~~~~yd~~~~~W~~~~~~p--~--~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~--~~~ 193 (318)
T 2woz_A 121 QTEASLDSVLCYDPVAAKWSEVKNLP--I--KVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDL--APM 193 (318)
T ss_dssp TTCCEEEEEEEEETTTTEEEEECCCS--S--CEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEE--CCC
T ss_pred CCCcccceEEEEeCCCCCEeECCCCC--C--cccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEEC--CCC
Confidence 1123456899999887665433332 1 112223333 4678998532 145699999875422212 122
Q ss_pred CCcccccCccccCeEEEccCceEEEEeCC-----CCeEEEEeCCCC
Q 020019 192 TPKEWYKNLVGLNGIVYHPDGFLIVIHTF-----SGNLFKIDIVDG 232 (332)
Q Consensus 192 ~~p~~~~~~~~~nGi~~~~dG~Lyva~~~-----~~~i~~id~~~~ 232 (332)
+.|. ...+.+.. ++.||+.-.. .+.++++|+++.
T Consensus 194 p~~r------~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 194 KTPR------SMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp SSCC------BSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CCCc------ccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 2111 12234443 5678876421 246788998865
No 339
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=83.14 E-value=31 Score=32.45 Aligned_cols=71 Identities=24% Similarity=0.431 Sum_probs=49.3
Q ss_pred cCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEe--CC
Q 020019 92 LELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTD--VT 169 (332)
Q Consensus 92 ~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd--~~ 169 (332)
|+....-|..|.+.+..|.+|+... .+.++.||+++|.....-+++. + .+|++. ..
T Consensus 254 pe~~~DFPvamqvs~kygviyviTK------~G~i~lyDleTgt~i~~nrIs~---------------~-~iF~t~~~~~ 311 (494)
T 1bpo_A 254 PEAQNDFPVAMQISEKHDVVFLITK------YGYIHLYDLETGTCIYMNRISG---------------E-TIFVTAPHEA 311 (494)
T ss_dssp TTSTTCCEEEEEEETTTTEEEEEET------TSEEEEEETTTCCEEEEEECCS---------------S-CEEEEEEETT
T ss_pred cccccCceeEEEecccCCEEEEEec------CceEEEEecccceeeeeecccC---------------C-ceEEecccCC
Confidence 4444457999999998899999975 5789999999999887666631 1 244432 33
Q ss_pred CCeEEEEcCCCceEE
Q 020019 170 GSKIWKVGVKGEFLS 184 (332)
Q Consensus 170 ~~~I~~v~~~g~~~~ 184 (332)
.+.|+.++.+|+...
T Consensus 312 ~~Gi~~Vnr~GqVl~ 326 (494)
T 1bpo_A 312 TAGIIGVNRKGQVLS 326 (494)
T ss_dssp TTEEEEEETTCEEEE
T ss_pred CCcEEEEccCceEEE
Confidence 456666666666543
No 340
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=82.75 E-value=27 Score=31.40 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=44.4
Q ss_pred CCCEEEEE-ecCCeEEEEECCCCCCCccceeeeEEec-ccCcCCCccce----EEE------eCCCCeEEEEEeCcCCCc
Q 020019 55 SGRRFIVS-FLDGGIGQVAVPDDYPPGTVLEEVTLVK-DLELTGNGSLG----LVL------DHPRNRLLVVAADVFGNK 122 (332)
Q Consensus 55 ~g~~~~~~-~~~g~I~~vd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g----i~v------d~~~g~l~v~~~~~~~~~ 122 (332)
++.+|+.. ..+|+|+.++..++.. .|.. -+.+...+|.- ..+ .. +|.+|+...
T Consensus 55 ~~~~~vv~p~~dG~l~a~~~~~G~~--------~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~-~g~Vy~Gs~------ 119 (339)
T 2be1_A 55 TYETLIIEPFGDGNIYYFNAHQGLQ--------KLPLSIRQLVSTSPLHLKTNIVVNDSGKIVE-DEKVYTGSM------ 119 (339)
T ss_dssp SSEEEEECCSTTTEEEEEETTTEEE--------EEEEEHHHHHTTCSEEEECC----------C-CEEEEECEE------
T ss_pred CCcEEEEEECCCCEEEEEECCCCcE--------EeeeccccceeccccccCCCceeeccccccc-CCEEEEEec------
Confidence 44566665 4689999999876641 2221 12211112211 112 13 388898875
Q ss_pred cceEEEEECCCCcEEEEEecC
Q 020019 123 YSAVAAYDLSTWNRLFLTQLS 143 (332)
Q Consensus 123 ~~~l~~~d~~~g~~~~~~~l~ 143 (332)
.++++.+|.++|+..+.....
T Consensus 120 ~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 120 RTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp EEEEEEEETTTCCEEEEESTT
T ss_pred CCEEEEEECCCCcEEEEEecC
Confidence 468999999999998877654
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=81.27 E-value=44 Score=32.96 Aligned_cols=201 Identities=15% Similarity=0.115 Sum_probs=103.2
Q ss_pred ceEEcCCCCEEEEE-e---cCCeEEEEECCCCCCCccceeeeEEe-ccc--CcC-CCccceEEEeCCCCeEEEEEeCcCC
Q 020019 49 CAKWDDSGRRFIVS-F---LDGGIGQVAVPDDYPPGTVLEEVTLV-KDL--ELT-GNGSLGLVLDHPRNRLLVVAADVFG 120 (332)
Q Consensus 49 gia~d~~g~~~~~~-~---~~g~I~~vd~~~~~~~~~~~~~~~~~-~~~--~~~-~~~~~gi~vd~~~g~l~v~~~~~~~ 120 (332)
+.+..-++.+|+.. . ....++++|+.+.++ . .+. ..| ..+ ...-.++++-..+|+||+..+....
T Consensus 391 g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W-----~--~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~ 463 (695)
T 2zwa_A 391 GDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKI-----D--MKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAP 463 (695)
T ss_dssp CEEEECSSCEEEECCBSSSBCCCEEEEEECSSCE-----E--EEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSST
T ss_pred eEEEEECCEEEEECCCCCCCcCcEEEEECCCCeE-----E--EeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCC
Confidence 33333556777765 2 234699999987765 1 222 111 111 1233455555312889998543221
Q ss_pred -CccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC--CCeEEEEcCCCceEEEecCCCCCCcccc
Q 020019 121 -NKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT--GSKIWKVGVKGEFLSIISSPLFTPKEWY 197 (332)
Q Consensus 121 -~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~--~~~I~~v~~~g~~~~~~~~~~~~~p~~~ 197 (332)
...+.+++||+.+.+......++ . .......++-.+|.||+---. .+.++++|+....=..+.. ....|.
T Consensus 464 ~~~~~dv~~yd~~t~~W~~~~~~p--~--~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~-~g~~p~-- 536 (695)
T 2zwa_A 464 HQGLSDNWIFDMKTREWSMIKSLS--H--TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP-KDEFFQ-- 536 (695)
T ss_dssp TCBCCCCEEEETTTTEEEECCCCS--B--CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC-SSGGGG--
T ss_pred CCccccEEEEeCCCCcEEECCCCC--C--CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC-CCCCCC--
Confidence 12456899999887654332221 1 123334455347789986321 1279999987542111111 111111
Q ss_pred cCccccCeEEEccC-ceEEEEeCC-------CCeEEEEeCCCCCCcccee--EEEEe-cCCCCC-CCCeEEEeCCCeEEE
Q 020019 198 KNLVGLNGIVYHPD-GFLIVIHTF-------SGNLFKIDIVDGVGEGEEI--KLIRV-AGGPLS-FGDGLELLSPTKLVV 265 (332)
Q Consensus 198 ~~~~~~nGi~~~~d-G~Lyva~~~-------~~~i~~id~~~~~~~~~~~--~~v~~-~g~~~~-~pdGi~~~~dG~l~v 265 (332)
...+...++++.+ +.||+.-.. .+.++++++.+.+- ...+ +.+.. + ..+ .-.++++-.+|+||+
T Consensus 537 -~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w-~~~~~W~~~~~~p--~~~R~~~~~~~~~~~~iyv 612 (695)
T 2zwa_A 537 -NSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENA-TEPITVIKKLQHP--LFQRYGSQIKYITPRKLLI 612 (695)
T ss_dssp -SCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCS-SCCEEEEEEEECG--GGCCBSCEEEEEETTEEEE
T ss_pred -cccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCcc-ccceEEEEcCCCC--CCCcccceEEEeCCCEEEE
Confidence 1234445777766 689987532 35689999987631 0011 22221 1 111 223455555589999
Q ss_pred Ee
Q 020019 266 AG 267 (332)
Q Consensus 266 a~ 267 (332)
.+
T Consensus 613 ~G 614 (695)
T 2zwa_A 613 VG 614 (695)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 342
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=81.04 E-value=8.2 Score=37.29 Aligned_cols=56 Identities=16% Similarity=0.302 Sum_probs=39.3
Q ss_pred ccceEEEEECCCCcEEEEEecCCCCCCCCCccce----EECCCC-----cEEEEeCCCCeEEEEcCCCc
Q 020019 122 KYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDV----TVDAEG-----NAYVTDVTGSKIWKVGVKGE 181 (332)
Q Consensus 122 ~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndi----avd~dG-----~lyvtd~~~~~I~~v~~~g~ 181 (332)
....|+++|+++|++++.+...+. ...++++ .+|.|+ .+|+.|. .|.|||||..+.
T Consensus 221 ~~~~Lyv~d~~tG~li~~i~~~~~---~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl-~GnlWRfDl~~~ 285 (570)
T 3hx6_A 221 DKAALLIIDMETGAITRKLEVTGR---TGVPNGLSSPRLADNNSDGVADYAYAGDL-QGNLWRFDLIAG 285 (570)
T ss_dssp CCEEEEEEETTTCCEEEEEEECCS---TTSCCCEEEEEEECTTSSSBCCEEEEEET-TSEEEEEECSCS
T ss_pred CccEEEEEECCCCceEEEEecCCC---CccCCccccceEEecCCCCceeEEEEEeC-CCcEEEEEcCCC
Confidence 346899999999999887776421 2334443 466653 3899995 699999997643
No 343
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=76.24 E-value=13 Score=34.02 Aligned_cols=61 Identities=11% Similarity=0.105 Sum_probs=45.8
Q ss_pred eEEEEECCCCcEEEEEecCCCCC-CCCCcc-ceEECCCCcEEEEeCCCCeEEEEcCCCceEEE
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSD-GKSCAD-DVTVDAEGNAYVTDVTGSKIWKVGVKGEFLSI 185 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~-~~~~~n-diavd~dG~lyvtd~~~~~I~~v~~~g~~~~~ 185 (332)
.|..+|++++++...+.+...++ +...+. ++-+-.+..||+++.....|+.++..|+...-
T Consensus 53 ~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~G~~~~k 115 (369)
T 3s9j_A 53 DIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQGEIIRN 115 (369)
T ss_dssp EEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTTCCEEEE
T ss_pred cEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCCceEEEE
Confidence 79999999999988888743221 223453 45555667899999999999999999986644
No 344
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=76.13 E-value=37 Score=29.17 Aligned_cols=136 Identities=17% Similarity=0.131 Sum_probs=69.1
Q ss_pred CeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC---------CCCeEEEEcCC
Q 020019 109 NRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV---------TGSKIWKVGVK 179 (332)
Q Consensus 109 g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~---------~~~~I~~v~~~ 179 (332)
+.||+..+. .......+.+||+.+++......++ . ......+++. ++.||+.-- ....++++|+.
T Consensus 25 ~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~p--~--~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 25 RLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADLQ--V--PRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCEEEECCB-SSSBCCCEEEEETTTTEEEECCCCS--S--CCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred CEEEEEeCc-CCCCcceEEEEcCCCCeEeECCCCC--c--ccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 678877542 1123456899999887654332221 1 1112233333 567888522 13568899987
Q ss_pred CceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeC-----CCCeEEEEeCCCCCCccceeEEEE-ecCCCCCCCC
Q 020019 180 GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHT-----FSGNLFKIDIVDGVGEGEEIKLIR-VAGGPLSFGD 253 (332)
Q Consensus 180 g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~-----~~~~i~~id~~~~~~~~~~~~~v~-~~g~~~~~pd 253 (332)
...-..+ +.++.|. .-..++.. ++.||+.-. ..+.++++|+.+. .-+.+. .+ .+. .-.
T Consensus 99 ~~~W~~~--~~~p~~r------~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~-----~W~~~~~~p-~~r-~~~ 162 (308)
T 1zgk_A 99 TNQWSPC--APMSVPR------NRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERD-----EWHLVAPML-TRR-IGV 162 (308)
T ss_dssp TTEEEEC--CCCSSCC------BTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTT-----EEEECCCCS-SCC-BSC
T ss_pred CCeEeEC--CCCCcCc------cccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCC-----eEeECCCCC-ccc-cce
Confidence 5432212 1222111 12233333 678888632 1356899998865 222221 11 111 112
Q ss_pred eEEEeCCCeEEEEe
Q 020019 254 GLELLSPTKLVVAG 267 (332)
Q Consensus 254 Gi~~~~dG~l~va~ 267 (332)
.+++- +++||+.+
T Consensus 163 ~~~~~-~~~iyv~G 175 (308)
T 1zgk_A 163 GVAVL-NRLLYAVG 175 (308)
T ss_dssp EEEEE-TTEEEEEC
T ss_pred EEEEE-CCEEEEEe
Confidence 34343 68999995
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=75.67 E-value=65 Score=31.75 Aligned_cols=145 Identities=11% Similarity=0.101 Sum_probs=76.6
Q ss_pred CeEEEEEeCcCCCccceEEEEECCCCcEEEEE-ecCCC-CCCCCCccceEECC-CCcEEEEeC------CCCeEEEEcCC
Q 020019 109 NRLLVVAADVFGNKYSAVAAYDLSTWNRLFLT-QLSGP-SDGKSCADDVTVDA-EGNAYVTDV------TGSKIWKVGVK 179 (332)
Q Consensus 109 g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~-~l~~~-~~~~~~~ndiavd~-dG~lyvtd~------~~~~I~~v~~~ 179 (332)
+.||+..+... ...+.+++||+.+++..... .++.. .........+++-. +|.+|+.-- ..+.++++|+.
T Consensus 398 ~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 398 NDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 78888754222 23456899999988765443 22100 01112234455544 778998521 13568999987
Q ss_pred CceEEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCC--CeEEEEeCCCCCCccceeEEEEecC---CCCCCCCe
Q 020019 180 GEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFS--GNLFKIDIVDGVGEGEEIKLIRVAG---GPLSFGDG 254 (332)
Q Consensus 180 g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~--~~i~~id~~~~~~~~~~~~~v~~~g---~~~~~pdG 254 (332)
...=... +.++.| ..-...+.-.+|.|||.-..+ +.++++|+.+. .=+.+...+ .+-.....
T Consensus 477 t~~W~~~--~~~p~~------R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~-----~W~~~~~~g~~p~~r~~~~a 543 (695)
T 2zwa_A 477 TREWSMI--KSLSHT------RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE-----IFKDVTPKDEFFQNSLVSAG 543 (695)
T ss_dssp TTEEEEC--CCCSBC------CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT-----EEEECCCSSGGGGSCCBSCE
T ss_pred CCcEEEC--CCCCCC------cccceEEEEcCCEEEEECCCCCCCCEEEEECCCC-----ceEEccCCCCCCCcccceeE
Confidence 5421111 222211 122344443467888863322 16999999875 222232211 01122334
Q ss_pred EEEeCC-CeEEEEe
Q 020019 255 LELLSP-TKLVVAG 267 (332)
Q Consensus 255 i~~~~d-G~l~va~ 267 (332)
++++.+ ++||+.+
T Consensus 544 ~v~~~~~~~iyv~G 557 (695)
T 2zwa_A 544 LEFDPVSKQGIILG 557 (695)
T ss_dssp EEEETTTTEEEEEC
T ss_pred EEEeCCCCEEEEEC
Confidence 666766 8999996
No 346
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=75.57 E-value=39 Score=29.12 Aligned_cols=181 Identities=16% Similarity=0.053 Sum_probs=91.3
Q ss_pred cCCCCEEEEE-ec----C------CeEEEEECCCCCCCccceeeeEEecccCcC-CCccceEEEeCCCCeEEEEEeCc--
Q 020019 53 DDSGRRFIVS-FL----D------GGIGQVAVPDDYPPGTVLEEVTLVKDLELT-GNGSLGLVLDHPRNRLLVVAADV-- 118 (332)
Q Consensus 53 d~~g~~~~~~-~~----~------g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gi~vd~~~g~l~v~~~~~-- 118 (332)
.-++.+|+.. .. . ..++++|+.+.++ ..-+.++ ...-.++++. +++||+..+..
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W----------~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~ 110 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW----------LGMPPLPSPRCLFGLGEA--LNSIYVVGGREIK 110 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE----------EECCCBSSCEESCEEEEE--TTEEEEECCEESS
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeE----------EECCCCCcchhceeEEEE--CCEEEEEeCCcCC
Confidence 3467777655 31 1 2388999876653 2112222 1222345554 37999985421
Q ss_pred -CCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCC------CCeEEEEcCCCceEEEecCCCC
Q 020019 119 -FGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVT------GSKIWKVGVKGEFLSIISSPLF 191 (332)
Q Consensus 119 -~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~------~~~I~~v~~~g~~~~~~~~~~~ 191 (332)
.......+.+||+.+++......++ ..+....++--++.||+.--. ...++++|+....=..+ +.+
T Consensus 111 ~~~~~~~~~~~~d~~~~~W~~~~~~p-----~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~--~~~ 183 (315)
T 4asc_A 111 DGERCLDSVMCYDRLSFKWGESDPLP-----YVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKEL--APM 183 (315)
T ss_dssp TTCCBCCCEEEEETTTTEEEECCCCS-----SCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEEC--CCC
T ss_pred CCCcccceEEEECCCCCcEeECCCCC-----CcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEEC--CCC
Confidence 1123456899999887654332231 122222233345679886322 35789999875422111 122
Q ss_pred CCcccccCccccCeEEEccCceEEEEeCC-----CCeEEEEeCCCCCCccceeEEEEecCCCCCC-CCeEEEeCCCeEEE
Q 020019 192 TPKEWYKNLVGLNGIVYHPDGFLIVIHTF-----SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSF-GDGLELLSPTKLVV 265 (332)
Q Consensus 192 ~~p~~~~~~~~~nGi~~~~dG~Lyva~~~-----~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~-pdGi~~~~dG~l~v 265 (332)
+.|. .. .+.+.. ++.||+.-.. .+.++++|+.+. .=+.+.. -+.+. -.++++ -+++||+
T Consensus 184 p~~r-----~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~-----~W~~~~~--~p~~r~~~~~~~-~~~~l~v 248 (315)
T 4asc_A 184 QTAR-----SL-FGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDN-----KWAPFEA--FPQERSSLSLVS-LVGTLYA 248 (315)
T ss_dssp SSCC-----BS-CEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTT-----EEEEECC--CSSCCBSCEEEE-ETTEEEE
T ss_pred CCch-----hc-eEEEEE-CCEEEEEeccCCCCccceEEEEECCCC-----eEEECCC--CCCcccceeEEE-ECCEEEE
Confidence 2111 12 233333 5678876432 236889998865 2222321 11111 123433 3679999
Q ss_pred Ee
Q 020019 266 AG 267 (332)
Q Consensus 266 a~ 267 (332)
.+
T Consensus 249 ~G 250 (315)
T 4asc_A 249 IG 250 (315)
T ss_dssp EE
T ss_pred EC
Confidence 85
No 347
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=72.73 E-value=57 Score=29.76 Aligned_cols=139 Identities=9% Similarity=0.118 Sum_probs=73.0
Q ss_pred ccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCc-----------EEEEEecCCCCCCCCCccceEECCCCc-EEE
Q 020019 98 GSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWN-----------RLFLTQLSGPSDGKSCADDVTVDAEGN-AYV 165 (332)
Q Consensus 98 ~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~-----------~~~~~~l~~~~~~~~~~ndiavd~dG~-lyv 165 (332)
..+-|++.+..|.++++.. .++.+|+++..+ ......+ .. ...+++ ||+ |++
T Consensus 39 ~~nlLais~~~gll~a~~~-------~~l~v~~~~~l~~~~~~~~~~~~~~~~~~l------p~-V~~l~f--d~~~L~v 102 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASG-------SKAVVGELQLLRDHITSDSTPLTFKWEKEI------PD-VIFVCF--HGDQVLV 102 (388)
T ss_dssp CCBCEEEETTTTEEEEEET-------TEEEEEEHHHHHHHHHSSSCCCCCSEEEEC------TT-EEEEEE--ETTEEEE
T ss_pred cccEEEEcCCCCEEEEeCC-------CEEEEEEhhHhhhhhccccccccceEEeeC------CC-eeEEEE--CCCEEEE
Confidence 5678999997555544433 356667754322 1122333 12 788999 665 677
Q ss_pred EeCCCCeEEEEcCCCce--EEEecCCCCCCcccccCccccCeEEEccCceEEEEeCCCCeEEEEeCCCCCCccceeEEEE
Q 020019 166 TDVTGSKIWKVGVKGEF--LSIISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHTFSGNLFKIDIVDGVGEGEEIKLIR 243 (332)
Q Consensus 166 td~~~~~I~~v~~~g~~--~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~~~~~i~~id~~~~~~~~~~~~~v~ 243 (332)
+ ..+.|..++..... .... .+.. ..+.+...+. .+.+. ..+|.|+.+++..+. ... +.
T Consensus 103 ~--~~~~l~v~dv~sl~~~~~~~---~~~~--------~v~~i~~~~p-~~av~-~~dG~L~v~dl~~~~----~~~-~~ 162 (388)
T 1xip_A 103 S--TRNALYSLDLEELSEFRTVT---SFEK--------PVFQLKNVNN-TLVIL-NSVNDLSALDLRTKS----TKQ-LA 162 (388)
T ss_dssp E--ESSEEEEEESSSTTCEEEEE---ECSS--------CEEEEEECSS-EEEEE-ETTSEEEEEETTTCC----EEE-EE
T ss_pred E--cCCcEEEEEchhhhccCccc---eeec--------ceeeEEecCC-CEEEE-ECCCCEEEEEccCCc----ccc-cc
Confidence 7 45788888865221 1110 1111 1123333322 34444 456778888887552 221 21
Q ss_pred ecCCCCCCCCeEEEeCCCeEEEEeCCceEEEEcCCC
Q 020019 244 VAGGPLSFGDGLELLSPTKLVVAGNPSARLVESSDG 279 (332)
Q Consensus 244 ~~g~~~~~pdGi~~~~dG~l~va~~~~~~~v~~~dg 279 (332)
.....++..++|..+...++..++. .+++
T Consensus 163 ------~~Vs~v~WSpkG~~vg~~dg~i~~~-~~~~ 191 (388)
T 1xip_A 163 ------QNVTSFDVTNSQLAVLLKDRSFQSF-AWRN 191 (388)
T ss_dssp ------ESEEEEEECSSEEEEEETTSCEEEE-EEET
T ss_pred ------CCceEEEEcCCceEEEEcCCcEEEE-cCCC
Confidence 2345788888884444445555544 4444
No 348
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=72.64 E-value=44 Score=28.48 Aligned_cols=134 Identities=6% Similarity=-0.115 Sum_probs=69.0
Q ss_pred CeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC----CCCeEEEEcCCCceEE
Q 020019 109 NRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV----TGSKIWKVGVKGEFLS 184 (332)
Q Consensus 109 g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~----~~~~I~~v~~~g~~~~ 184 (332)
+.||+..+.. ....+.+||+.+++......++ . ......+++ -++.||+.-- ....++++|+....-.
T Consensus 12 ~~l~~~GG~~---~~~~~~~~d~~~~~W~~~~~~p--~--~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 12 DYRIALFGGS---QPQSCRYFNPKDYSWTDIRCPF--E--KRRDAACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWY 83 (306)
T ss_dssp CEEEEEECCS---STTSEEEEETTTTEEEECCCCS--C--CCBSCEEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEE
T ss_pred ceEEEEeCCC---CCceEEEecCCCCCEecCCCCC--c--ccceeEEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEE
Confidence 5677765421 1456899999987654332231 1 112223333 3567888632 3467999998754222
Q ss_pred EecCCCCCCcccccCccccCeEEEccCceEEEEeC------CCCeEEEEeCCCCCCccceeEEEEecCCCCCC-CCeEEE
Q 020019 185 IISSPLFTPKEWYKNLVGLNGIVYHPDGFLIVIHT------FSGNLFKIDIVDGVGEGEEIKLIRVAGGPLSF-GDGLEL 257 (332)
Q Consensus 185 ~~~~~~~~~p~~~~~~~~~nGi~~~~dG~Lyva~~------~~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~-pdGi~~ 257 (332)
.+. .++.|. .. ...+.. ++.||+.-. ..+.++++|+.+. .-+.+.. -+.+. -..+++
T Consensus 84 ~~~--~~p~~r-----~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~-----~W~~~~~--~p~~r~~~~~~~ 147 (306)
T 3ii7_A 84 SKL--GPPTPR-----DS-LAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTE-----SWHTKPS--MLTQRCSHGMVE 147 (306)
T ss_dssp EEE--CCSSCC-----BS-CEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTT-----EEEEECC--CSSCCBSCEEEE
T ss_pred ECC--CCCccc-----cc-eeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCC-----ceEeCCC--CcCCcceeEEEE
Confidence 121 121111 12 233333 568888633 2356899999876 2222221 11111 123333
Q ss_pred eCCCeEEEEe
Q 020019 258 LSPTKLVVAG 267 (332)
Q Consensus 258 ~~dG~l~va~ 267 (332)
-+++||+.+
T Consensus 148 -~~~~iyv~G 156 (306)
T 3ii7_A 148 -ANGLIYVCG 156 (306)
T ss_dssp -ETTEEEEEC
T ss_pred -ECCEEEEEC
Confidence 468999996
No 349
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=71.22 E-value=87 Score=31.23 Aligned_cols=170 Identities=12% Similarity=0.168 Sum_probs=87.3
Q ss_pred cccceEEcCCC-CEEEEEecCCeEEEEECCCCCCCccceeeeEEecccC-c----------CCCccceEEEeCC-CCeEE
Q 020019 46 FRECAKWDDSG-RRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLE-L----------TGNGSLGLVLDHP-RNRLL 112 (332)
Q Consensus 46 ~pegia~d~~g-~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~gi~vd~~-~g~l~ 112 (332)
+..+|+++|.. +++|+....|.|+|-+-. ++ +|..-.. . ...+...|++|+. .+++|
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~Dg-G~---------tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~ 91 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWNAA-KW---------EWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLY 91 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETT-TT---------EEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEE
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEECCC-CC---------CeeECccCccccccCCCcccccceeEEEECCCCCCEEE
Confidence 66789999976 566666556788888744 43 2321100 1 1124678899884 37899
Q ss_pred EEEeCcCC-CccceEEEEECCCCcEEEEEecCCCC----CCCCCccceEECCC--CcEEEEeCCCCeEEEEcCCCceEEE
Q 020019 113 VVAADVFG-NKYSAVAAYDLSTWNRLFLTQLSGPS----DGKSCADDVTVDAE--GNAYVTDVTGSKIWKVGVKGEFLSI 185 (332)
Q Consensus 113 v~~~~~~~-~~~~~l~~~d~~~g~~~~~~~l~~~~----~~~~~~ndiavd~d--G~lyvtd~~~~~I~~v~~~g~~~~~ 185 (332)
++...... .....|++ ..+.|+-.....++.+. .+......++++|. +.+|+... .+.||+=+-.|+.=..
T Consensus 92 ~~~g~~~~~~~~~~i~~-S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-~~~l~~S~DgG~TW~~ 169 (763)
T 3a0f_A 92 LAQGDYVQWDPWAAFLV-SDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR-TQGLWRSTDRAQTWSR 169 (763)
T ss_dssp EEECSCTTTCSCCEEEE-ESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS-SSCEEEESSTTSSCEE
T ss_pred EEecccccCCCCceEEE-ECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC-CCcEEEECCCCcCccc
Confidence 87642100 01233443 33344422223332111 01112246999985 56888743 3678876555653221
Q ss_pred ecCCCCCCcccccCccccCeEEEccCc--eEEEEeCCCCeEEEEeCCCC
Q 020019 186 ISSPLFTPKEWYKNLVGLNGIVYHPDG--FLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 186 ~~~~~~~~p~~~~~~~~~nGi~~~~dG--~Lyva~~~~~~i~~id~~~~ 232 (332)
.. .+... .....+...|+++|.. .+|++-...+.|++ ..+.+
T Consensus 170 ~~--~~~~~--~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~-S~DgG 213 (763)
T 3a0f_A 170 MN--QLPDS--STYGIGIISVIFDPKNVGTAYVASHAVGGLWV-TWDGG 213 (763)
T ss_dssp CT--TSCCC--SCTTTCEEEEEECSSSTTCEEEEESSTTCEEE-ESSSS
T ss_pred cc--cCccc--CCCccceEEEEECCCCCCEEEEEEeCCCeEEE-ECCCC
Confidence 11 11100 0012345577888754 79998775544553 33434
No 350
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=67.28 E-value=60 Score=27.87 Aligned_cols=170 Identities=14% Similarity=0.062 Sum_probs=82.8
Q ss_pred CeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcC-C----Cc-cceEEEEECCCCcEEEE
Q 020019 66 GGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVF-G----NK-YSAVAAYDLSTWNRLFL 139 (332)
Q Consensus 66 g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~-~----~~-~~~l~~~d~~~g~~~~~ 139 (332)
..++.+|+.++++ . . ...+......-..+++. +++||+..+... . .. ...+.+||+.+++....
T Consensus 24 ~~~~~yd~~~~~W-----~--~-~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 24 TAAVAYDPMENEC-----Y--L-TALAEQIPRNHSSIVTQ--QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp SEEEEEETTTTEE-----E--E-EEECTTSCSSEEEEECS--SSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred cceEEECCCCCce-----e--c-ccCCccCCccceEEEEE--CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 3588999887654 1 1 11111111222334433 378998865211 0 01 12388999988765433
Q ss_pred EecCCCCCCCCCccceEECCCCcEEEEeC-------CCCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc
Q 020019 140 TQLSGPSDGKSCADDVTVDAEGNAYVTDV-------TGSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG 212 (332)
Q Consensus 140 ~~l~~~~~~~~~~ndiavd~dG~lyvtd~-------~~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG 212 (332)
..++ . ......+++. ++.||+.-- ....++++|+....=..+ +.++.+. .-...+. -++
T Consensus 94 ~~~p--~--~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~r------~~~~~~~-~~~ 159 (318)
T 2woz_A 94 PPLP--S--ARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV--KNLPIKV------YGHNVIS-HNG 159 (318)
T ss_dssp SCBS--S--CBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE--CCCSSCE------ESCEEEE-ETT
T ss_pred CCCC--c--cccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeEC--CCCCCcc------cccEEEE-ECC
Confidence 2231 1 1122233333 567988522 124688899874422212 1222111 1223444 467
Q ss_pred eEEEEeCC------CCeEEEEeCCCCCCccceeEEEEecCCCCCC-CCeEEEeCCCeEEEEe
Q 020019 213 FLIVIHTF------SGNLFKIDIVDGVGEGEEIKLIRVAGGPLSF-GDGLELLSPTKLVVAG 267 (332)
Q Consensus 213 ~Lyva~~~------~~~i~~id~~~~~~~~~~~~~v~~~g~~~~~-pdGi~~~~dG~l~va~ 267 (332)
.||+.-.. .+.++++|+.+. .=+.+.. .+.+. -.++++ -+++||+.+
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~~-----~W~~~~~--~p~~r~~~~~~~-~~~~iyv~G 213 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKKG-----DWKDLAP--MKTPRSMFGVAI-HKGKIVIAG 213 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTTT-----EEEEECC--CSSCCBSCEEEE-ETTEEEEEE
T ss_pred EEEEEcCCCCCCCccceEEEEcCCCC-----EEEECCC--CCCCcccceEEE-ECCEEEEEc
Confidence 88886421 356899999876 2222321 11111 124444 368999996
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=65.15 E-value=70 Score=27.89 Aligned_cols=51 Identities=8% Similarity=0.119 Sum_probs=29.5
Q ss_pred ceEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC------CCCeEEEEcC
Q 020019 124 SAVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV------TGSKIWKVGV 178 (332)
Q Consensus 124 ~~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~------~~~~I~~v~~ 178 (332)
..+.+||+++.+......++.+ ......+++. ++.||+--- ....++.++.
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~---~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWY---GTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSC---CCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCC---CcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 5789999998776555444211 1121334443 567888521 1456777765
No 352
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=63.69 E-value=1.1e+02 Score=29.56 Aligned_cols=103 Identities=16% Similarity=0.159 Sum_probs=65.5
Q ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEe--------------CCCCeEEEEcCCCceEEEec---
Q 020019 125 AVAAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTD--------------VTGSKIWKVGVKGEFLSIIS--- 187 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd--------------~~~~~I~~v~~~g~~~~~~~--- 187 (332)
.+..+|.. |++++.+.++ ......-+++...++|+++++- .....|+.+|.+|+.+-.+.
T Consensus 227 ~i~elD~~-Gkvv~~~~lp--~g~~~~HHD~~~l~nGn~Lv~v~~~d~~~~dG~~~~~vdD~I~EVD~tGeVv~eW~~~d 303 (571)
T 3elq_A 227 HWYEFDMM-GQVLEDHKLP--RGFADATHESIETPNGTVLLRVGKSNYRRDDGVHVTTIRDHILEVDKSGRVVDVWDLTK 303 (571)
T ss_dssp EEEEECTT-CCEEEEEECC--TTEECBCSCEEECTTSCEEEEEEETTEECTTSCEECCCSCEEEEECTTSCEEEEEEHHH
T ss_pred EEEEECCC-CcEEEEEECC--CCccccccceEEcCCCcEEEEEecccccCCCCcccceeccEEEEECCCCCEEEEEEhHH
Confidence 57788874 6777666663 2112456889999999976632 12457889998898664332
Q ss_pred --CC-CCCCc--------------c---------------------cccCccccCeEEEccCc-eEEEEeCCCCeEEEEe
Q 020019 188 --SP-LFTPK--------------E---------------------WYKNLVGLNGIVYHPDG-FLIVIHTFSGNLFKID 228 (332)
Q Consensus 188 --~~-~~~~p--------------~---------------------~~~~~~~~nGi~~~~dG-~Lyva~~~~~~i~~id 228 (332)
++ ....+ . ....-...|.|.+++.+ .+.++-... .|++|+
T Consensus 304 hld~~~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~g~~~g~~~~~Dw~HiNsv~~d~~dd~~liSsR~~-~I~~Id 382 (571)
T 3elq_A 304 ILDPKRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQ-GVVKIG 382 (571)
T ss_dssp HSCTTCCTTGGGSBTTC-------CCCSCBCCCCTTCCSSSSSCSSTTSCSCCEEEEEEETTTTEEEEEETTT-EEEEEE
T ss_pred ccCcccccchhccccccccccccccccccccccccccccccccccCCCCCCcEecceeEcCCCCEEEEECCcc-EEEEEc
Confidence 01 00000 0 00133567999999855 888888888 899998
Q ss_pred CCCC
Q 020019 229 IVDG 232 (332)
Q Consensus 229 ~~~~ 232 (332)
. ++
T Consensus 383 ~-tG 385 (571)
T 3elq_A 383 R-DK 385 (571)
T ss_dssp T-TS
T ss_pred C-CC
Confidence 6 45
No 353
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=54.34 E-value=1.7e+02 Score=28.86 Aligned_cols=124 Identities=15% Similarity=0.128 Sum_probs=64.8
Q ss_pred ccceEEEeCCC-CeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCC-CCCC---CCCccceEECCC--CcEEEEeCC-
Q 020019 98 GSLGLVLDHPR-NRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSG-PSDG---KSCADDVTVDAE--GNAYVTDVT- 169 (332)
Q Consensus 98 ~~~gi~vd~~~-g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~-~~~~---~~~~ndiavd~d--G~lyvtd~~- 169 (332)
...+|++++.+ +++|+... .+.|++.+-. |+-.. .+.. +... ......|++||. +.+|++...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~------~ggv~rS~D~-G~tW~--~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~ 94 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAA------IGGAYRWDPS-TETWI--PLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMY 94 (737)
T ss_dssp CCCEEEECSSSTTCEEEECS------SSCEEEEETT-TTEEE--ECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSC
T ss_pred eeeEEEECCCCCCEEEEEec------CCcEEEeCCC-CCCEE--ECcCccCcccccCCCcceEEeCCCCCCEEEEEeccc
Confidence 57799999864 68888653 2457776643 33222 2211 1100 123568999984 479987532
Q ss_pred -------CCeEEEEcCCCceEEEecCCCCCCcccccCccccCeEEEccCc--eEEEEeCCCCeEEEEeCCCC
Q 020019 170 -------GSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVGLNGIVYHPDG--FLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 170 -------~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~~nGi~~~~dG--~Lyva~~~~~~i~~id~~~~ 232 (332)
...|||-+-.|+.=.....+ +......+.......|+++|.. .||++....+.||| ..+.+
T Consensus 95 ~~~~~~~~~~l~~S~DgG~TW~~~~~~-~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~-S~DgG 164 (737)
T 2cn3_A 95 TNDWLPNMGAILRSTDRGETWEKTILP-FKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWR-STDYG 164 (737)
T ss_dssp SSSSSCCCCEEEEESSSSSSCEEEECS-SCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEE-ESSTT
T ss_pred ccccccCCccEEEeCCCCCCcccCCCC-cccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEE-eCCCC
Confidence 36788876667632211111 1000000011112579999763 88887533245663 33434
No 354
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=53.06 E-value=1.8e+02 Score=28.72 Aligned_cols=207 Identities=17% Similarity=0.200 Sum_probs=99.7
Q ss_pred cccceEEcCCC-CEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcC---CCccceEEEeCC-CCeEEEEEeCcC-
Q 020019 46 FRECAKWDDSG-RRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELT---GNGSLGLVLDHP-RNRLLVVAADVF- 119 (332)
Q Consensus 46 ~pegia~d~~g-~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~gi~vd~~-~g~l~v~~~~~~- 119 (332)
+..+|++++.. +++|+....+.|+|-+-.+.++ + .+...+... ..+...|++||. .+++|++.....
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW-----~--~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~ 96 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETW-----I--PLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTN 96 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEE-----E--ECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCE-----E--ECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccc
Confidence 66789999873 3444454457899997543332 1 121112111 124678999984 378999874211
Q ss_pred --CCccceEEEEECCCCcEEEEEecCCCC----CCCCCccceEECCC--CcEEEEeCCCCeEEEEcCCCceEEEecC-CC
Q 020019 120 --GNKYSAVAAYDLSTWNRLFLTQLSGPS----DGKSCADDVTVDAE--GNAYVTDVTGSKIWKVGVKGEFLSIISS-PL 190 (332)
Q Consensus 120 --~~~~~~l~~~d~~~g~~~~~~~l~~~~----~~~~~~ndiavd~d--G~lyvtd~~~~~I~~v~~~g~~~~~~~~-~~ 190 (332)
......|++ ..+.|+-.....++.+. .+......+++||. +.+|+.......||+=+-.|+.=..... +.
T Consensus 97 ~~~~~~~~l~~-S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~tW~~~~~~~~ 175 (737)
T 2cn3_A 97 DWLPNMGAILR-STDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWSKVESFPN 175 (737)
T ss_dssp SSSCCCCEEEE-ESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEESSTTSSCEECTTCCC
T ss_pred ccccCCccEEE-eCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEeCCCCcceecccCCCC
Confidence 001123443 23334422223332110 01123367999986 4688876433568776555653221111 00
Q ss_pred ---CC-Cccc--ccCccccCeEEEccCc--------eEEEEeCCCC-eEEEEeCCCCCCccceeEEEEecCCCC-CCCCe
Q 020019 191 ---FT-PKEW--YKNLVGLNGIVYHPDG--------FLIVIHTFSG-NLFKIDIVDGVGEGEEIKLIRVAGGPL-SFGDG 254 (332)
Q Consensus 191 ---~~-~p~~--~~~~~~~nGi~~~~dG--------~Lyva~~~~~-~i~~id~~~~~~~~~~~~~v~~~g~~~-~~pdG 254 (332)
+. .|.. .....+...++++|.. .+|++....+ .||| ..+.++ .=+ ...+.+. ..+.-
T Consensus 176 ~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~-S~DgG~----tW~--~~~~~p~~~~~~~ 248 (737)
T 2cn3_A 176 PGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYR-STDGGV----TWK--AVPGQPKGLLPHH 248 (737)
T ss_dssp CCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEE-ESSTTS----CCE--ECTTCCCSSEEEE
T ss_pred CcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEE-EcCCCC----ceE--ECCCCCCcccceE
Confidence 00 0100 0011123347777643 8999876543 4654 345442 111 1211111 12234
Q ss_pred EEEeCCCeEEEEe
Q 020019 255 LELLSPTKLVVAG 267 (332)
Q Consensus 255 i~~~~dG~l~va~ 267 (332)
+++++++.||++.
T Consensus 249 ~~~~~~~~l~~~~ 261 (737)
T 2cn3_A 249 GVLASNGMLYITY 261 (737)
T ss_dssp EEECTTSEEEEEE
T ss_pred EEECCCCeEEEEe
Confidence 5677789999873
No 355
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=51.35 E-value=1.1e+02 Score=25.79 Aligned_cols=180 Identities=15% Similarity=0.145 Sum_probs=92.7
Q ss_pred CCCEEEEE-ec----CCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEE
Q 020019 55 SGRRFIVS-FL----DGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAY 129 (332)
Q Consensus 55 ~g~~~~~~-~~----~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~ 129 (332)
++.+|+.. .. ...++++|+.+.++ + .+...|. ...-.++++- ++++|+..+.........+.+|
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W-----~--~~~~~p~--~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 129 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQW-----T--SVANMRD--RRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAY 129 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEE-----E--EECCCSS--CCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCce-----e--eCCCCCc--cccceEEEEE--CCEEEEEcCCCCCccCceEEEE
Confidence 46677654 21 24689999876654 1 2221121 1223445554 2789998653221234568899
Q ss_pred ECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeC---C----CCeEEEEcCCCceEEEecCCCCCCcccccCccc
Q 020019 130 DLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDV---T----GSKIWKVGVKGEFLSIISSPLFTPKEWYKNLVG 202 (332)
Q Consensus 130 d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~---~----~~~I~~v~~~g~~~~~~~~~~~~~p~~~~~~~~ 202 (332)
|+++++......++ . ......+++ -++.||+.-- . ...++++|+....=..+ +.++.+ ...
T Consensus 130 d~~~~~W~~~~~~p--~--~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~-----r~~ 197 (302)
T 2xn4_A 130 NIKSNEWFHVAPMN--T--RRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI--AEMSTR-----RSG 197 (302)
T ss_dssp ETTTTEEEEECCCS--S--CCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEE--CCCSSC-----CBS
T ss_pred eCCCCeEeecCCCC--C--cccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC--CCCccc-----ccc
Confidence 99887655433332 1 112222333 3568998521 1 45689999874422212 122211 112
Q ss_pred cCeEEEccCceEEEEeCC-----CCeEEEEeCCCCCCccceeEEEEecCCCCC-CCCeEEEeCCCeEEEEe
Q 020019 203 LNGIVYHPDGFLIVIHTF-----SGNLFKIDIVDGVGEGEEIKLIRVAGGPLS-FGDGLELLSPTKLVVAG 267 (332)
Q Consensus 203 ~nGi~~~~dG~Lyva~~~-----~~~i~~id~~~~~~~~~~~~~v~~~g~~~~-~pdGi~~~~dG~l~va~ 267 (332)
..++.. ++.||+.-.. .+.++++|+++. .-+.+... +.. .-.++++- +++||+.+
T Consensus 198 -~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~-----~W~~~~~~--~~~r~~~~~~~~-~~~i~v~G 258 (302)
T 2xn4_A 198 -AGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTN-----AWRQVADM--NMCRRNAGVCAV-NGLLYVVG 258 (302)
T ss_dssp -CEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTT-----EEEEECCC--SSCCBSCEEEEE-TTEEEEEC
T ss_pred -ccEEEE-CCEEEEECCCCCCcccceEEEEeCCCC-----CEeeCCCC--CCccccCeEEEE-CCEEEEEC
Confidence 233333 5688887432 357899999876 23323211 111 12234443 68999996
No 356
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=46.24 E-value=1.5e+02 Score=32.26 Aligned_cols=45 Identities=13% Similarity=0.375 Sum_probs=34.8
Q ss_pred cCcCCCccceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEec
Q 020019 92 LELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQL 142 (332)
Q Consensus 92 ~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l 142 (332)
|+..+.-|..|.+.+..|.+|+... .+.++.||++||+....-++
T Consensus 254 ~~~~~Dfpv~~~vs~k~g~iy~itk------~G~~~~~d~~t~~~i~~~ri 298 (1630)
T 1xi4_A 254 PEAQNDFPVAMQISEKHDVVFLITK------YGYIHLYDLETGTCIYMNRI 298 (1630)
T ss_pred cccccCcceEEEeccccCEEEEEec------CceEEEEecccchhhhhccc
Confidence 4444457999999998899999875 56799999999887654444
No 357
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=40.46 E-value=2.1e+02 Score=25.89 Aligned_cols=135 Identities=13% Similarity=0.060 Sum_probs=79.2
Q ss_pred ccceEEcCCCCEEEEEecCCeEEEEECCCCCCCccceeeeEEecccCcCCCccceEEEeCCCCeEEEEEeCcCCCccceE
Q 020019 47 RECAKWDDSGRRFIVSFLDGGIGQVAVPDDYPPGTVLEEVTLVKDLELTGNGSLGLVLDHPRNRLLVVAADVFGNKYSAV 126 (332)
Q Consensus 47 pegia~d~~g~~~~~~~~~g~I~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~vd~~~g~l~v~~~~~~~~~~~~l 126 (332)
+..+++ +++.+++. .++.|..+|..+... . ...... . .....+..-+ ..+.++.. .+.|
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~-----~-~~~~~~-~---~~v~~i~~~~--p~~av~~~------dG~L 148 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSE-----F-RTVTSF-E---KPVFQLKNVN--NTLVILNS------VNDL 148 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTC-----E-EEEEEC-S---SCEEEEEECS--SEEEEEET------TSEE
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhc-----c-Ccccee-e---cceeeEEecC--CCEEEEEC------CCCE
Confidence 678889 77777766 678999999765431 1 011111 1 1334555444 34566654 3679
Q ss_pred EEEECCCCcEEEEEecCCCCCCCCCccceEECCCCcEEEEeCCCCeEEEEcCCCce---EEEecCCCCCCcccc---cCc
Q 020019 127 AAYDLSTWNRLFLTQLSGPSDGKSCADDVTVDAEGNAYVTDVTGSKIWKVGVKGEF---LSIISSPLFTPKEWY---KNL 200 (332)
Q Consensus 127 ~~~d~~~g~~~~~~~l~~~~~~~~~~ndiavd~dG~lyvtd~~~~~I~~v~~~g~~---~~~~~~~~~~~p~~~---~~~ 200 (332)
.+||+++++..... .....+++.|+| +++. ..+|.|..+++++.. ...+..+ |... ...
T Consensus 149 ~v~dl~~~~~~~~~---------~~Vs~v~WSpkG-~~vg-~~dg~i~~~~~~~~~~~~k~~I~~P----p~~~~~~~~~ 213 (388)
T 1xip_A 149 SALDLRTKSTKQLA---------QNVTSFDVTNSQ-LAVL-LKDRSFQSFAWRNGEMEKQFEFSLP----SELEELPVEE 213 (388)
T ss_dssp EEEETTTCCEEEEE---------ESEEEEEECSSE-EEEE-ETTSCEEEEEEETTEEEEEEEECCC----HHHHTSCTTT
T ss_pred EEEEccCCcccccc---------CCceEEEEcCCc-eEEE-EcCCcEEEEcCCCccccccceecCC----cccccccCCC
Confidence 99999877764321 234579999999 5444 345777777777654 2222111 1110 123
Q ss_pred cccCeEEEccCceEEEE
Q 020019 201 VGLNGIVYHPDGFLIVI 217 (332)
Q Consensus 201 ~~~nGi~~~~dG~Lyva 217 (332)
.....|.|.+++...++
T Consensus 214 ~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 214 YSPLSVTILSPQDFLAV 230 (388)
T ss_dssp SEEEEEEESSSSEEEEE
T ss_pred eeEEEEEEecCCeEEEE
Confidence 45788999998854444
No 358
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=39.74 E-value=2.6e+02 Score=26.85 Aligned_cols=80 Identities=11% Similarity=-0.038 Sum_probs=46.7
Q ss_pred eEEEeCCCCeEEEEEeCcCC---------CccceE--EEEECCCCcEEEEEecCCC-CC--CCCCccceEECCCCcEEEE
Q 020019 101 GLVLDHPRNRLLVVAADVFG---------NKYSAV--AAYDLSTWNRLFLTQLSGP-SD--GKSCADDVTVDAEGNAYVT 166 (332)
Q Consensus 101 gi~vd~~~g~l~v~~~~~~~---------~~~~~l--~~~d~~~g~~~~~~~l~~~-~~--~~~~~ndiavd~dG~lyvt 166 (332)
...+-++ +.|.+-+++... ...++. +.+|.++.+....++...+ +. --.+...+..-++|+.+++
T Consensus 437 ~a~~~~~-g~i~vFDNg~~~~~~~p~~~~~~~SR~l~y~ID~~~~Tv~~vw~y~~~~g~~~yS~~~gs~Q~L~nGN~li~ 515 (571)
T 3elq_A 437 TAWISSK-GTLTIFDNGDGRHLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERGYDFYSPITSIIEYQADRNTMFG 515 (571)
T ss_dssp EEEECTT-SCEEEEECCTTGGGSCCSSGGGCCCEEEEEEEETTTTEEEEEEEECGGGGGGGCCSSCCEEEEETTTTEEEE
T ss_pred CeEEcCC-CeEEEEeCCCCCCCCcccCCCCCCceEEEEEEcCCCCEEEEEEEecCCCCCCcccccccccEECCCCCEEEE
Confidence 4555554 888888876321 122344 4478887766555555210 00 0123445666688988888
Q ss_pred eCC-----------CCeEEEEcCCCc
Q 020019 167 DVT-----------GSKIWKVGVKGE 181 (332)
Q Consensus 167 d~~-----------~~~I~~v~~~g~ 181 (332)
.+. .+.|.-++++|+
T Consensus 516 ~g~~~~~~~~g~~~~~~i~E~~~~~~ 541 (571)
T 3elq_A 516 FGGSIHLFDVGQPTVGKLNEIDYKTK 541 (571)
T ss_dssp EEEEETTTSTTSEEEEEEEEEETTTC
T ss_pred ecccccccccCCCCceeEEEECCCCC
Confidence 765 466777777765
No 359
>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A
Probab=29.24 E-value=81 Score=20.16 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=19.7
Q ss_pred CCCeEEEEeCCceEEEEcCCCceEEEEEeeec
Q 020019 259 SPTKLVVAGNPSARLVESSDGWETAAVVAKFS 290 (332)
Q Consensus 259 ~dG~l~va~~~~~~~v~~~dg~~~~~~~~~~~ 290 (332)
++|.|...-....-++++.+||+.-.+-+.++
T Consensus 22 ~eGtL~yv~d~~eLyiRVr~Gwr~v~Lg~~ip 53 (56)
T 3hsh_A 22 PEGWLIFVAEQEELYVRVQNGFRKVQLEARTP 53 (56)
T ss_dssp CTTCEEEETTTTEEEEEETTEEEEECEEEEEE
T ss_pred CCeeEEEEEecceEEEEEcCceeeeeeccccc
Confidence 56665554433346678899998765554443
No 360
>4ftd_A Uncharacterized protein; 6-bladed-beta-propeller, immunoglobulin-like, carbohydrate metabolism, structural genomics; 1.91A {Bacteroides eggerthii}
Probab=24.74 E-value=4.2e+02 Score=24.57 Aligned_cols=80 Identities=13% Similarity=0.155 Sum_probs=48.0
Q ss_pred cceEEEeCCCCeEEEEEeCcCCCccceEEEEECCCCcEEEEEecCC---CCCCCCC--ccceEECCCCc--EEEEeCCCC
Q 020019 99 SLGLVLDHPRNRLLVVAADVFGNKYSAVAAYDLSTWNRLFLTQLSG---PSDGKSC--ADDVTVDAEGN--AYVTDVTGS 171 (332)
Q Consensus 99 ~~gi~vd~~~g~l~v~~~~~~~~~~~~l~~~d~~~g~~~~~~~l~~---~~~~~~~--~ndiavd~dG~--lyvtd~~~~ 171 (332)
...+..+.+ |.+|.++........-+|++|.-.+.+++..+...- +..+... --.+.-|.+|+ |+++.....
T Consensus 191 ~~~m~a~~~-G~Iy~anLsg~~gs~fkIYrW~~~ts~Pe~i~s~~v~~~~gTg~R~Gd~isv~GD~~gNa~I~~~~n~s~ 269 (453)
T 4ftd_A 191 DYNMGALIN-GHVYLSSLSGGKVSPFKIYYWETPTSNPEVIANINVGNIPGAGNRHGDNASYNIDENGNGFIFFGDNAAT 269 (453)
T ss_dssp EEEEEEEET-TEEEEEEEBCSTTSCEEEEEESSTTSCCEEEEEECGGGSTTCCSCBCSCCEEEECTTSCEEEEEEBTTSS
T ss_pred EEEEEEecC-CCEEEEeccCCCCCceEEEEeCCCCCCceeEEEeccccCCcccccccceEEEEEcCCCCEEEEECCCCce
Confidence 466777775 999999875322133468999877767666655421 1111111 12366677775 666666666
Q ss_pred eEEEEcCC
Q 020019 172 KIWKVGVK 179 (332)
Q Consensus 172 ~I~~v~~~ 179 (332)
.+.|+...
T Consensus 270 ~~~rwtVt 277 (453)
T 4ftd_A 270 EFLKVPIS 277 (453)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 77777654
No 361
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=21.27 E-value=5.6e+02 Score=24.69 Aligned_cols=18 Identities=22% Similarity=0.170 Sum_probs=11.8
Q ss_pred eEEEEECCCCcEEEEEec
Q 020019 125 AVAAYDLSTWNRLFLTQL 142 (332)
Q Consensus 125 ~l~~~d~~~g~~~~~~~l 142 (332)
.|..||.+++++..++.+
T Consensus 293 ~v~A~d~~~~~L~~~W~~ 310 (591)
T 2zux_A 293 MLVAYNFRDGKLSKLWTL 310 (591)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred EEEEEECCCCceEEEEEe
Confidence 477788777776555544
No 362
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=20.14 E-value=5.8e+02 Score=24.45 Aligned_cols=54 Identities=19% Similarity=0.344 Sum_probs=32.1
Q ss_pred CCeEEEEcCC-CceEEEecCCCCCCcccccCccccCeE----EEc--cCc---eEEEEeCCCCeEEEEeCCCC
Q 020019 170 GSKIWKVGVK-GEFLSIISSPLFTPKEWYKNLVGLNGI----VYH--PDG---FLIVIHTFSGNLFKIDIVDG 232 (332)
Q Consensus 170 ~~~I~~v~~~-g~~~~~~~~~~~~~p~~~~~~~~~nGi----~~~--~dG---~Lyva~~~~~~i~~id~~~~ 232 (332)
...||.+|.+ |+.+..+..+.. ...++|+ .+| .|| .+|+.|. .+.|||||+...
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~--------~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl-~GnlWRfDl~~~ 285 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGR--------TGVPNGLSSPRLADNNSDGVADYAYAGDL-QGNLWRFDLIAG 285 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCS--------TTSCCCEEEEEEECTTSSSBCCEEEEEET-TSEEEEEECSCS
T ss_pred ccEEEEEECCCCceEEEEecCCC--------CccCCccccceEEecCCCCceeEEEEEeC-CCcEEEEEcCCC
Confidence 4578999876 665443322111 0123343 243 344 6999986 577999999854
Done!