Your job contains 1 sequence.
>020021
MVGSQSEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRL
YDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF
GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL
LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIK
WTPGSLMFVTGSSELSFWIPDLSKLGAYVGRK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020021
(332 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154996 - symbol:AT5G66240 "AT5G66240" species... 1451 1.3e-148 1
TAIR|locus:2222612 - symbol:AT5G14530 "AT5G14530" species... 822 5.8e-82 1
DICTYBASE|DDB_G0278945 - symbol:DDB_G0278945 "WD repeat-c... 772 1.1e-76 1
UNIPROTKB|Q5ZMV7 - symbol:WDR82 "WD repeat-containing pro... 665 2.5e-65 1
UNIPROTKB|E2RGF2 - symbol:WDR82 "Uncharacterized protein"... 657 1.8e-64 1
UNIPROTKB|Q6UXN9 - symbol:WDR82 "WD repeat-containing pro... 657 1.8e-64 1
UNIPROTKB|F2Z5U3 - symbol:WDR82 "Uncharacterized protein"... 657 1.8e-64 1
MGI|MGI:1924555 - symbol:Wdr82 "WD repeat domain containi... 657 1.8e-64 1
FB|FBgn0032030 - symbol:Wdr82 species:7227 "Drosophila me... 649 1.2e-63 1
ZFIN|ZDB-GENE-030131-333 - symbol:wdr82 "WD repeat domain... 633 6.2e-62 1
UNIPROTKB|F1MG94 - symbol:WDR82 "Uncharacterized protein"... 629 1.6e-61 1
UNIPROTKB|E1BRZ6 - symbol:TWF2 "Twinfilin-2" species:9031... 628 2.1e-61 1
ASPGD|ASPL0000060719 - symbol:AN0065 species:162425 "Emer... 343 1.8e-42 2
POMBASE|SPAC824.04 - symbol:SPAC824.04 "WD repeat protein... 316 4.1e-41 2
WB|WBGene00016374 - symbol:swd-2.2 species:6239 "Caenorha... 434 7.5e-41 1
POMBASE|SPBC18H10.06c - symbol:swd2 "Set1C complex subuni... 364 3.5e-36 2
CGD|CAL0004300 - symbol:SWD2 species:5476 "Candida albica... 349 2.1e-34 2
SGD|S000001501 - symbol:SWD2 "Subunit of the COMPASS (Set... 353 2.9e-32 1
UNIPROTKB|G4N7I7 - symbol:MGG_06406 "Uncharacterized prot... 336 1.8e-30 1
FB|FBgn0031431 - symbol:CG3515 species:7227 "Drosophila m... 265 6.4e-23 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 259 2.6e-22 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 255 7.0e-22 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 252 1.5e-21 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 252 1.5e-21 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 252 1.5e-21 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 252 1.5e-21 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 252 1.5e-21 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 252 1.5e-21 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 249 3.5e-21 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 249 3.5e-21 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 245 8.0e-21 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 237 7.8e-19 1
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 218 1.2e-16 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 218 1.3e-16 1
UNIPROTKB|Q0VCN2 - symbol:MORG1 "Mitogen-activated protei... 211 1.2e-15 1
UNIPROTKB|F1SM42 - symbol:ATG16L1 "Uncharacterized protei... 219 1.4e-15 1
UNIPROTKB|C9JBU3 - symbol:WDR82 "WD repeat-containing pro... 193 5.5e-15 1
UNIPROTKB|E1BYR9 - symbol:ATG16L1 "Uncharacterized protei... 213 8.1e-15 1
UNIPROTKB|F1SEX9 - symbol:WDR83 "Uncharacterized protein"... 204 1.0e-14 1
UNIPROTKB|Q9BRX9 - symbol:WDR83 "WD repeat domain-contain... 203 1.5e-14 1
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 203 1.5e-14 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 204 1.7e-14 1
UNIPROTKB|E2RRL3 - symbol:WDR83 "Uncharacterized protein"... 202 2.1e-14 1
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 202 2.1e-14 1
ZFIN|ZDB-GENE-050417-401 - symbol:atg16l1 "ATG16 autophag... 204 9.6e-14 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 197 1.7e-13 1
UNIPROTKB|Q8N0X2 - symbol:SPAG16 "Sperm-associated antige... 201 2.3e-13 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 199 2.8e-13 1
UNIPROTKB|Q676U5 - symbol:ATG16L1 "Autophagy-related prot... 196 8.5e-13 1
UNIPROTKB|E2R5F8 - symbol:ATG16L1 "Uncharacterized protei... 196 8.5e-13 1
UNIPROTKB|E1BGS8 - symbol:ATG16L1 "Uncharacterized protei... 196 8.9e-13 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 190 9.0e-13 1
TAIR|locus:2157762 - symbol:AT5G50230 "AT5G50230" species... 194 1.0e-12 1
MGI|MGI:1924290 - symbol:Atg16l1 "autophagy related 16-li... 195 1.1e-12 1
POMBASE|SPBC713.05 - symbol:SPBC713.05 "WD repeat protein... 187 1.1e-12 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 186 1.6e-12 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 192 2.3e-12 1
WB|WBGene00019427 - symbol:atg-16.2 species:6239 "Caenorh... 188 5.7e-12 1
RGD|1310631 - symbol:Atg16l1 "autophagy related 16-like 1... 185 1.6e-11 1
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 176 5.2e-11 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 179 5.5e-11 1
FB|FBgn0039705 - symbol:Atg16 species:7227 "Drosophila me... 180 5.9e-11 1
DICTYBASE|DDB_G0275323 - symbol:tipD "autophagy protein 1... 179 7.8e-11 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 173 1.8e-10 1
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 156 2.2e-10 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 170 4.0e-10 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 170 4.0e-10 1
WB|WBGene00017178 - symbol:atg-16.1 species:6239 "Caenorh... 168 1.3e-09 1
DICTYBASE|DDB_G0282793 - symbol:wdr61 "WD40 repeat-contai... 161 1.7e-09 1
WB|WBGene00018014 - symbol:F33G12.2 species:6239 "Caenorh... 160 2.5e-09 1
UNIPROTKB|Q19986 - symbol:F33G12.2 "Protein F33G12.2" spe... 160 2.5e-09 1
UNIPROTKB|C9J355 - symbol:WDR82 "WD repeat-containing pro... 142 2.8e-09 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 171 2.8e-09 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 150 4.3e-09 2
DICTYBASE|DDB_G0286457 - symbol:strap "putative serine-th... 157 4.9e-09 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 174 5.3e-09 1
DICTYBASE|DDB_G0269686 - symbol:DDB_G0269686 "WD40 repeat... 148 5.5e-09 2
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 158 5.8e-09 1
GENEDB_PFALCIPARUM|PFC0100c - symbol:PFC0100c "regulatory... 162 6.4e-09 1
UNIPROTKB|O97334 - symbol:PFC0100c "Regulatory protein, p... 162 6.4e-09 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 162 8.0e-09 1
UNIPROTKB|G4N183 - symbol:MGG_07465 "Periodic tryptophan ... 163 8.9e-09 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 155 9.3e-09 1
RGD|1311400 - symbol:Atg16l2 "autophagy related 16-like 2... 160 1.1e-08 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 159 1.3e-08 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 159 1.3e-08 1
SGD|S000000379 - symbol:SWD3 "Essential subunit of the CO... 154 1.4e-08 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 159 1.6e-08 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 158 2.1e-08 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 158 2.1e-08 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 158 2.1e-08 1
ZFIN|ZDB-GENE-040808-14 - symbol:thoc3 "THO complex 3" sp... 152 2.5e-08 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 157 2.7e-08 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 152 3.0e-08 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 155 3.0e-08 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 155 3.0e-08 1
ASPGD|ASPL0000008575 - symbol:AN6217 species:162425 "Emer... 156 3.2e-08 1
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic... 149 3.6e-08 2
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 155 3.9e-08 1
TAIR|locus:2051094 - symbol:MAC3B "MOS4-associated compl... 154 4.1e-08 1
WARNING: Descriptions of 458 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2154996 [details] [associations]
symbol:AT5G66240 "AT5G66240" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0080008
KO:K14962 HOGENOM:HOG000176477 OMA:CTNMAFW EMBL:AY081317
EMBL:BT002585 IPI:IPI00543245 RefSeq:NP_569031.1 UniGene:At.43477
ProteinModelPortal:Q8RXD8 SMR:Q8RXD8 IntAct:Q8RXD8 STRING:Q8RXD8
EnsemblPlants:AT5G66240.2 GeneID:836756 KEGG:ath:AT5G66240
TAIR:At5g66240 InParanoid:Q8RXD8 PhylomeDB:Q8RXD8
ProtClustDB:CLSN2687231 ArrayExpress:Q8RXD8 Genevestigator:Q8RXD8
Uniprot:Q8RXD8
Length = 331
Score = 1451 (515.8 bits), Expect = 1.3e-148, P = 1.3e-148
Identities = 274/327 (83%), Positives = 302/327 (92%)
Query: 6 SEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA 65
+ERED+VSLELSEEI+QSME G FRDYN RISS+DFHK+S+ +VTASDD+SIRLYDV +
Sbjct: 5 TEREDRVSLELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVAS 64
Query: 66 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 125
ATCLKTINSKKYGVDLVCFTSHPTTVIYSS+NGWD+SLRLLSLHDNKYLRYFKGHHDRVV
Sbjct: 65 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVV 124
Query: 126 SLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIR 185
SLSLCS +CFISGSLDRTVLLWDQR EKCQGLLRVQGRPAAAYDDQGL+FA+AFGGYIR
Sbjct: 125 SLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAFGGYIR 184
Query: 186 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245
MFDAR YEKGPF+IFSVGGD+S+ANVVKFSNDGRLMLLTTM+G IHVLDSFRGTLLST++
Sbjct: 185 MFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFS 244
Query: 246 VKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS 305
VKPV+ STL+A+FSPEGMFV+SGSGDGS +AW VRSGK+V SWM +EPPVIKW PGS
Sbjct: 245 VKPVAGESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGS 304
Query: 306 LMFVTGSSELSFWIPDLSKLGAYVGRK 332
MFVTGSSEL+F IPDLSKL AY RK
Sbjct: 305 PMFVTGSSELAFVIPDLSKLPAYAIRK 331
>TAIR|locus:2222612 [details] [associations]
symbol:AT5G14530 "AT5G14530" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 EMBL:AL163792 KO:K14962 HOGENOM:HOG000176477
OMA:LRYLSMY ProtClustDB:CLSN2687231 EMBL:AY086271 EMBL:BT025881
IPI:IPI00521261 PIR:T48626 RefSeq:NP_196957.1 UniGene:At.28230
ProteinModelPortal:Q9LYK6 SMR:Q9LYK6 STRING:Q9LYK6 PaxDb:Q9LYK6
PRIDE:Q9LYK6 EnsemblPlants:AT5G14530.1 GeneID:831304
KEGG:ath:AT5G14530 TAIR:At5g14530 InParanoid:Q9LYK6
PhylomeDB:Q9LYK6 Genevestigator:Q9LYK6 Uniprot:Q9LYK6
Length = 330
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 154/311 (49%), Positives = 222/311 (71%)
Query: 15 ELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS 74
EL + +++ M +G F D+ G+I S+ FH++ LVT+S+D+S+RL+D+ A LK
Sbjct: 5 ELDDGLVRRMAMGAVFSDFGGKIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLKITYH 64
Query: 75 KKYGVDLVCFTSHPTTVIYSSKNGWD---ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS 131
KK+G D VCFT HP+++I SS+ + ESLR LS++DN+ LRYFKGH DRVVSL +
Sbjct: 65 KKHGTDRVCFTHHPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSP 124
Query: 132 SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF-GGYIRMFDAR 190
D F+SGSLDR+V LWD R CQG+L ++GRPA AYD QGLVFA+A GG +++FD+R
Sbjct: 125 INDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPAVAYDQQGLVFAIAMEGGAVKLFDSR 184
Query: 191 KYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250
Y+KGPFD F VGGD ++ N +KFSNDG+ MLLTT +I+VLD++RG ++++P S
Sbjct: 185 CYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEP-S 243
Query: 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVT 310
+ + +EA+F+P+G +V+SGSGDG+++AW++ + EVA W + +KW P MFV
Sbjct: 244 QGTPIEATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVA 303
Query: 311 GSSELSFWIPD 321
S+ L+FWIP+
Sbjct: 304 ASTVLTFWIPN 314
>DICTYBASE|DDB_G0278945 [details] [associations]
symbol:DDB_G0278945 "WD repeat-containing protein 82"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278945 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030587 EMBL:AAFI02000024 KO:K14962 OMA:CTNMAFW
RefSeq:XP_641992.1 ProteinModelPortal:Q54XN8 STRING:Q54XN8
EnsemblProtists:DDB0218126 GeneID:8621724 KEGG:ddi:DDB_G0278945
InParanoid:Q54XN8 ProtClustDB:CLSZ2729103 Uniprot:Q54XN8
Length = 319
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 150/318 (47%), Positives = 210/318 (66%)
Query: 11 KVSLELSEEILQSMEVGMSFRDYNGR-ISSMDFHKSSSYLVTASDDESIRLYDVTAATCL 69
K +L L++ ++Q+M +G +D N I+SMDF+K S L+TASDDESI LY++
Sbjct: 2 KSTLRLTDNVVQNMGIGKLHKDDNSSVINSMDFNKDGSLLITASDDESIHLYNIDTGELQ 61
Query: 70 KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSL 129
KT+NSKKYGVDL+ FT + ++I +SKN WDESLR LSLHDNKYL+YFKGH ++VVS+S+
Sbjct: 62 KTLNSKKYGVDLIKFTHNNNSIICASKNSWDESLRYLSLHDNKYLKYFKGHRNKVVSISM 121
Query: 130 CSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFG-GYIRMFD 188
D F+SGSLD T+ +WD R CQGLLR GRPA ++D QG++FA A I+++D
Sbjct: 122 SPINDMFLSGSLDDTIRMWDLRTNVCQGLLRRNGRPAVSFDPQGIIFATAVSVNTIKLYD 181
Query: 189 ARKYEKGPFDIFSVGGDIS-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247
R Y+KGPF FS+ I + +KF+ DG+ +LL+T I ++DSF G + Y
Sbjct: 182 LRNYDKGPFSSFSIDHPIPVEWTSMKFTADGKYILLSTKTNIIFLIDSFTGEVKQRYTSF 241
Query: 248 PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLM 307
S +E+SFSP+ +V+SGS DG+V+ W +G+EVA W + ++W P S+M
Sbjct: 242 KNDNGSVIESSFSPDAQYVLSGSEDGTVHIWKTLTGEEVAVWGGHSSTVGRVQWNPRSMM 301
Query: 308 FVTGSSELSFWIPDLSKL 325
T S L+FWIP+ S L
Sbjct: 302 AATACSNLAFWIPNDSVL 319
>UNIPROTKB|Q5ZMV7 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K14962
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 EMBL:AJ719277
IPI:IPI00598962 RefSeq:NP_001006135.1 UniGene:Gga.17656
ProteinModelPortal:Q5ZMV7 STRING:Q5ZMV7 PRIDE:Q5ZMV7
Ensembl:ENSGALT00000036280 GeneID:415942 KEGG:gga:415942 CTD:80335
HOVERGEN:HBG089149 NextBio:20819468 ArrayExpress:Q5ZMV7
Uniprot:Q5ZMV7
Length = 313
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 128/312 (41%), Positives = 203/312 (65%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
++L++ +L+S V FR+ + +I+ DF + ++++SDD+SI LYD +T+
Sbjct: 1 MKLTDNVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY 60
Query: 74 SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 133
SKKYGVDL+ +T TV+YSS N D+++R LSLHDNKY+RYF GH RVV+LS+
Sbjct: 61 SKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHTKRVVALSMSPVD 119
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG-YIRMFDARKY 192
D FISGSLD+T+ LWD R+ CQGL+ +QG+P ++D +GL+FA ++++D R +
Sbjct: 120 DTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSF 179
Query: 193 EKGPFDIFSVGGDIS-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 251
+KGPF F + D + + +KFSNDG+L+L++T G I ++D+F+G +L T+ S+
Sbjct: 180 DKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGGFIRLIDAFKGAVLHTFGGYNNSK 239
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFVT 310
TLEASF+P+ F++ GS DG ++ W+ SG +VA T P +++ P + F +
Sbjct: 240 AVTLEASFTPDSQFIMIGSEDGKIHVWNGESGMKVAVLDGKHTGPITCLQFNPKFMTFAS 299
Query: 311 GSSELSFWIPDL 322
S ++FW+P +
Sbjct: 300 ACSNMAFWLPTI 311
>UNIPROTKB|E2RGF2 [details] [associations]
symbol:WDR82 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188 KO:K14962
GO:GO:0072357 GeneTree:ENSGT00530000063965 CTD:80335 OMA:CTNMAFW
EMBL:AAEX03012197 RefSeq:XP_859624.1 ProteinModelPortal:E2RGF2
SMR:E2RGF2 Ensembl:ENSCAFT00000015643 GeneID:484740 KEGG:cfa:484740
NextBio:20858819 Uniprot:E2RGF2
Length = 313
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 126/312 (40%), Positives = 202/312 (64%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
++L++ +L+S V FR+ + +I+ DF + ++++SDD+SI LYD +T+
Sbjct: 1 MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY 60
Query: 74 SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 133
SKKYGVDL+ +T TV+YSS N D+++R LSLHDNKY+RYF GH RVV+LS+
Sbjct: 61 SKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVD 119
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG-YIRMFDARKY 192
D FISGSLD+T+ LWD R+ CQGL+ +QG+P ++D +GL+FA ++++D R +
Sbjct: 120 DTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSF 179
Query: 193 EKGPFDIFSVGGDIS-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 251
+KGPF F + D + + +KFSNDG+L+L++T I ++D+F+G ++ T+ S+
Sbjct: 180 DKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSK 239
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFVT 310
TLEASF+P+ F++ GS DG ++ W+ SG +VA T P +++ P + F +
Sbjct: 240 AVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFAS 299
Query: 311 GSSELSFWIPDL 322
S ++FW+P +
Sbjct: 300 ACSNMAFWLPTI 311
>UNIPROTKB|Q6UXN9 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0051568 "histone H3-K4 methylation" evidence=IDA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471055 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000785 GO:GO:0048188 GO:GO:0051568 KO:K14962
GO:GO:0072357 HOGENOM:HOG000176477 OrthoDB:EOG4TTGJJ CTD:80335
HOVERGEN:HBG089149 EMBL:AY358264 EMBL:AK074290 EMBL:AK291380
IPI:IPI00152695 RefSeq:NP_079498.2 UniGene:Hs.194110
ProteinModelPortal:Q6UXN9 SMR:Q6UXN9 IntAct:Q6UXN9 STRING:Q6UXN9
PhosphoSite:Q6UXN9 DMDM:74758580 PaxDb:Q6UXN9 PeptideAtlas:Q6UXN9
PRIDE:Q6UXN9 Ensembl:ENST00000296490 GeneID:80335 KEGG:hsa:80335
UCSC:uc003ddk.2 GeneCards:GC03M052265 HGNC:HGNC:28826 MIM:611059
neXtProt:NX_Q6UXN9 PharmGKB:PA142670585 InParanoid:Q6UXN9
OMA:CTNMAFW ChiTaRS:WDR82 GenomeRNAi:80335 NextBio:70900
ArrayExpress:Q6UXN9 Bgee:Q6UXN9 CleanEx:HS_WDR82
Genevestigator:Q6UXN9 Uniprot:Q6UXN9
Length = 313
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 126/312 (40%), Positives = 202/312 (64%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
++L++ +L+S V FR+ + +I+ DF + ++++SDD+SI LYD +T+
Sbjct: 1 MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY 60
Query: 74 SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 133
SKKYGVDL+ +T TV+YSS N D+++R LSLHDNKY+RYF GH RVV+LS+
Sbjct: 61 SKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVD 119
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG-YIRMFDARKY 192
D FISGSLD+T+ LWD R+ CQGL+ +QG+P ++D +GL+FA ++++D R +
Sbjct: 120 DTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSF 179
Query: 193 EKGPFDIFSVGGDIS-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 251
+KGPF F + D + + +KFSNDG+L+L++T I ++D+F+G ++ T+ S+
Sbjct: 180 DKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSK 239
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFVT 310
TLEASF+P+ F++ GS DG ++ W+ SG +VA T P +++ P + F +
Sbjct: 240 AVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFAS 299
Query: 311 GSSELSFWIPDL 322
S ++FW+P +
Sbjct: 300 ACSNMAFWLPTI 311
>UNIPROTKB|F2Z5U3 [details] [associations]
symbol:WDR82 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
[GO:0048188 "Set1C/COMPASS complex" evidence=IEA] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000785
GO:GO:0042800 GO:GO:0048188 KO:K14962 GO:GO:0072357
GeneTree:ENSGT00530000063965 OMA:CTNMAFW EMBL:CU915558
RefSeq:XP_003132297.1 UniGene:Ssc.1045 UniGene:Ssc.53788
ProteinModelPortal:F2Z5U3 SMR:F2Z5U3 Ensembl:ENSSSCT00000012513
GeneID:100522703 KEGG:ssc:100522703 CTD:728505 Uniprot:F2Z5U3
Length = 313
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 126/312 (40%), Positives = 202/312 (64%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
++L++ +L+S V FR+ + +I+ DF + ++++SDD+SI LYD +T+
Sbjct: 1 MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY 60
Query: 74 SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 133
SKKYGVDL+ +T TV+YSS N D+++R LSLHDNKY+RYF GH RVV+LS+
Sbjct: 61 SKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVD 119
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG-YIRMFDARKY 192
D FISGSLD+T+ LWD R+ CQGL+ +QG+P ++D +GL+FA ++++D R +
Sbjct: 120 DTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSF 179
Query: 193 EKGPFDIFSVGGDIS-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 251
+KGPF F + D + + +KFSNDG+L+L++T I ++D+F+G ++ T+ S+
Sbjct: 180 DKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSK 239
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFVT 310
TLEASF+P+ F++ GS DG ++ W+ SG +VA T P +++ P + F +
Sbjct: 240 AVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFAS 299
Query: 311 GSSELSFWIPDL 322
S ++FW+P +
Sbjct: 300 ACSNMAFWLPTI 311
>MGI|MGI:1924555 [details] [associations]
symbol:Wdr82 "WD repeat domain containing 82" species:10090
"Mus musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0048188 "Set1C/COMPASS complex" evidence=ISO]
[GO:0051568 "histone H3-K4 methylation" evidence=ISO;IMP]
[GO:0072357 "PTW/PP1 phosphatase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924555 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000785 GO:GO:0003682
GO:GO:0042800 GO:GO:0048188 GO:GO:0051568 KO:K14962 GO:GO:0072357
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 OrthoDB:EOG4TTGJJ
CTD:80335 HOVERGEN:HBG089149 OMA:CTNMAFW ChiTaRS:WDR82
EMBL:AK035109 EMBL:AK037620 EMBL:AK149692 EMBL:EF011615
EMBL:BC019115 EMBL:BC031502 IPI:IPI00221414 RefSeq:NP_084172.1
UniGene:Mm.265125 ProteinModelPortal:Q8BFQ4 SMR:Q8BFQ4
IntAct:Q8BFQ4 STRING:Q8BFQ4 PhosphoSite:Q8BFQ4
REPRODUCTION-2DPAGE:Q8BFQ4 PaxDb:Q8BFQ4 PRIDE:Q8BFQ4
Ensembl:ENSMUST00000020490 GeneID:77305 KEGG:mmu:77305
InParanoid:Q8BFQ4 NextBio:346735 Bgee:Q8BFQ4 CleanEx:MM_WDR82
Genevestigator:Q8BFQ4 Uniprot:Q8BFQ4
Length = 313
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 126/312 (40%), Positives = 202/312 (64%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
++L++ +L+S V FR+ + +I+ DF + ++++SDD+SI LYD +T+
Sbjct: 1 MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY 60
Query: 74 SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 133
SKKYGVDL+ +T TV+YSS N D+++R LSLHDNKY+RYF GH RVV+LS+
Sbjct: 61 SKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVD 119
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG-YIRMFDARKY 192
D FISGSLD+T+ LWD R+ CQGL+ +QG+P ++D +GL+FA ++++D R +
Sbjct: 120 DTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSF 179
Query: 193 EKGPFDIFSVGGDIS-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 251
+KGPF F + D + + +KFSNDG+L+L++T I ++D+F+G ++ T+ S+
Sbjct: 180 DKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSK 239
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFVT 310
TLEASF+P+ F++ GS DG ++ W+ SG +VA T P +++ P + F +
Sbjct: 240 AVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFAS 299
Query: 311 GSSELSFWIPDL 322
S ++FW+P +
Sbjct: 300 ACSNMAFWLPTI 311
>FB|FBgn0032030 [details] [associations]
symbol:Wdr82 species:7227 "Drosophila melanogaster"
[GO:0008352 "katanin complex" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] [GO:0048188 "Set1C/COMPASS
complex" evidence=IDA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0080182 "histone H3-K4 trimethylation"
evidence=IMP] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048188 GO:GO:0080182
HSSP:P16649 KO:K14962 GeneTree:ENSGT00530000063965 OMA:CTNMAFW
EMBL:AY069081 RefSeq:NP_609217.1 UniGene:Dm.6967 SMR:Q9VLN1
IntAct:Q9VLN1 MINT:MINT-1570298 STRING:Q9VLN1
EnsemblMetazoa:FBtr0079650 GeneID:34153 KEGG:dme:Dmel_CG17293
UCSC:CG17293-RA FlyBase:FBgn0032030 InParanoid:Q9VLN1
OrthoDB:EOG4C5B12 GenomeRNAi:34153 NextBio:787125 Uniprot:Q9VLN1
Length = 317
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 126/313 (40%), Positives = 201/313 (64%)
Query: 12 VSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT 71
+ ++L + +++S +V FR+ +I+++DF + +L++ S+D+ I +YD T +T
Sbjct: 1 MKIKLIDSVVRSFKVAKIFRENTDKINAIDFAPNGEHLISCSEDDQIVIYDCEKGTQSRT 60
Query: 72 INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS 131
+NSKKYGVDL+ FT T I+SS D+++R LSLHDNKYLRYF GH +V+SL +
Sbjct: 61 VNSKKYGVDLIHFTHANNTAIHSSTKV-DDTIRYLSLHDNKYLRYFPGHTKKVISLCISP 119
Query: 132 SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGY-IRMFDAR 190
+D F+SGSLD+T+ LWD R+ CQGL+ + GRP AAYD +GL+FA I+++D R
Sbjct: 120 VEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPIAAYDPEGLIFAAGVNSESIKLYDLR 179
Query: 191 KYEKGPFDIFSVGGDIS-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV 249
++KGPF F + + D +KFS DG+ +L++T I ++D+F GT L T+ P
Sbjct: 180 SFDKGPFVTFKLNQEKECDWTGLKFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPN 239
Query: 250 SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPV--IKWTPGSLM 307
++ +EASFSP+ F+ SGS DG V+ W+ +G +V S ++ D PV +++ P +M
Sbjct: 240 NKGIPIEASFSPDSQFIFSGSTDGRVHIWNADTGNKV-SVLNGDHPGPVQCVQFNPKYMM 298
Query: 308 FVTGSSELSFWIP 320
+ + ++FW+P
Sbjct: 299 LASACTNMAFWLP 311
>ZFIN|ZDB-GENE-030131-333 [details] [associations]
symbol:wdr82 "WD repeat domain containing 82"
species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR002108 InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102
SMART:SM00320 ZFIN:ZDB-GENE-030131-333 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005622
OrthoDB:EOG4TTGJJ EMBL:AY423022 IPI:IPI00492504
ProteinModelPortal:Q6TEM7 SMR:Q6TEM7 PRIDE:Q6TEM7
HOGENOM:HOG000170291 InParanoid:Q6TEM7 ArrayExpress:Q6TEM7
Bgee:Q6TEM7 Uniprot:Q6TEM7
Length = 600
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 123/305 (40%), Positives = 197/305 (64%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
++L++ +L+S V FR+ + +I+ DF + ++++SDD+SI LYD +T+
Sbjct: 1 MKLTDSVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLY 60
Query: 74 SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 133
SKKYGVDL+ +T TV+YSS N D+++R LSLHDNKY+RYF GH+ RVV+LS+
Sbjct: 61 SKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVD 119
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG-YIRMFDARKY 192
D FISGSLD+T+ LWD R+ CQGL+ +QG+P ++D +GL+FA ++++D R +
Sbjct: 120 DTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSF 179
Query: 193 EKGPFDIFSVGGDIS-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 251
+KGPF F + + + + +KFSNDG+L+L++T G + VLD+F+G +L ++ S+
Sbjct: 180 DKGPFATFKLQYERTCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHSFGGYNNSK 239
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPV-IKWTPGSLMFVT 310
LEASF+P+ F++ GS DG ++ W+ SG +VA T P +++ P + F +
Sbjct: 240 GVILEASFTPDSQFIMIGSEDGKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTFAS 299
Query: 311 GSSEL 315
S +
Sbjct: 300 ACSNM 304
>UNIPROTKB|F1MG94 [details] [associations]
symbol:WDR82 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
[GO:0048188 "Set1C/COMPASS complex" evidence=IEA] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR002108
InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188
GO:GO:0072357 GeneTree:ENSGT00530000063965 EMBL:DAAA02054383
EMBL:DAAA02054384 IPI:IPI00688764 ProteinModelPortal:F1MG94
Ensembl:ENSBTAT00000045850 ArrayExpress:F1MG94 Uniprot:F1MG94
Length = 602
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 123/305 (40%), Positives = 196/305 (64%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
++L++ +L+S V FR+ + +I+ DF + ++++SDD+SI LYD +T+
Sbjct: 1 MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY 60
Query: 74 SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 133
SKKYGVDL+ +T TV+YSS N D+++R LSLHDNKY+RYF GH RVV+LS+
Sbjct: 61 SKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVD 119
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG-YIRMFDARKY 192
D FISGSLD+T+ LWD R+ CQGL+ +QG+P ++D +GL+FA ++++D R +
Sbjct: 120 DTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSF 179
Query: 193 EKGPFDIFSVGGDIS-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 251
+KGPF F + D + + +KFSNDG+L+L++T I ++D+F+G ++ T+ S+
Sbjct: 180 DKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSK 239
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFVT 310
TLEASF+P+ F++ GS DG ++ W+ SG +VA T P +++ P + F +
Sbjct: 240 AVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFAS 299
Query: 311 GSSEL 315
S +
Sbjct: 300 ACSNM 304
>UNIPROTKB|E1BRZ6 [details] [associations]
symbol:TWF2 "Twinfilin-2" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR002108
InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188
GO:GO:0072357 GeneTree:ENSGT00530000063965 EMBL:AADN02056441
EMBL:AADN02056442 EMBL:AADN02056443 EMBL:AADN02056444
EMBL:AADN02056445 EMBL:AADN02056446 EMBL:AADN02056447
IPI:IPI00577651 ProteinModelPortal:E1BRZ6
Ensembl:ENSGALT00000006337 ArrayExpress:E1BRZ6 Uniprot:E1BRZ6
Length = 601
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 125/306 (40%), Positives = 197/306 (64%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
++L++ +L+S V FR+ + +I+ DF + ++++SDD+SI LYD +T+
Sbjct: 1 MKLTDNVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY 60
Query: 74 SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 133
SKKYGVDL+ +T TV+YSS N D+++R LSLHDNKY+RYF GH RVV+LS+
Sbjct: 61 SKKYGVDLIRYTHAANTVVYSS-NKIDDTIRYLSLHDNKYIRYFPGHTKRVVALSMSPVD 119
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG-YIRMFDARKY 192
D FISGSLD+T+ LWD R+ CQGL+ +QG+P ++D +GL+FA ++++D R +
Sbjct: 120 DTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSF 179
Query: 193 EK-GPFDIFSVGGDIS-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250
+K GPF F + D + + +KFSNDG+L+L++T G I ++D+F+G +L T+ S
Sbjct: 180 DKKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGGFIRLIDAFKGAVLHTFGGYNNS 239
Query: 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFV 309
+ TLEASF+P+ F++ GS DG ++ W+ SG +VA T P +++ P + F
Sbjct: 240 KAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGMKVAVLDGKHTGPITCLQFNPKFMTFA 299
Query: 310 TGSSEL 315
+ S +
Sbjct: 300 SACSNM 305
>ASPGD|ASPL0000060719 [details] [associations]
symbol:AN0065 species:162425 "Emericella nidulans"
[GO:0030846 "termination of RNA polymerase II transcription,
poly(A)-coupled" evidence=IEA] [GO:0031126 "snoRNA 3'-end
processing" evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IEA]
[GO:0034729 "histone H3-K79 methylation" evidence=IEA] [GO:0030847
"termination of RNA polymerase II transcription, exosome-dependent"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 EMBL:AACD01000003
KO:K14962 HOGENOM:HOG000176477 OrthoDB:EOG44BFB3 OMA:CTNMAFW
RefSeq:XP_657669.1 ProteinModelPortal:Q5BHB5 STRING:Q5BHB5
EnsemblFungi:CADANIAT00002687 GeneID:2875841 KEGG:ani:AN0065.2
Uniprot:Q5BHB5
Length = 364
Score = 343 (125.8 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 83/216 (38%), Positives = 116/216 (53%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
++S+DF ++V+ DDE I+++DV A K+I SKKYG L FT H V+++S
Sbjct: 45 VTSLDFDDQGEFVVSCGDDEIIQIFDVKAGKMTKSIPSKKYGAHLARFTHHSRQVLHAST 104
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D+SLRLL LH Y+RYF GH D+V L+L D IS S D TV +WD + Q
Sbjct: 105 KV-DDSLRLLDLHSESYIRYFSGHTDKVTCLALSPGSDSVISCSKDDTVSIWDLGSRYAQ 163
Query: 157 GLLRVQGRPAAAYDDQGLVFAVAFGGY--IRMFDARKYEKGPFDIFSVG--------GDI 206
G L++ A+D V A+A I ++D R Y+K PF F +
Sbjct: 164 GKLKLSTPYLVAFDPSASVIAIASQSTSSILLYDFRNYDKSPFSTFDLAKYEERYTPSTR 223
Query: 207 SDA-NVVKFSNDGRLMLL-TTMEGHIHVLDSFRGTL 240
A ++FSNDG+ +L+ T GH VLD+F G L
Sbjct: 224 GRAWTRLEFSNDGKYLLVGTDYHGHF-VLDAFEGEL 258
Score = 123 (48.4 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 212 VKFSNDGRLMLL-TTMEGHIHVLDSFRGTLL--------STYNVKPVSRNSTL----EAS 258
++FSNDG+ +L+ T GH VLD+F G L S PVS +A
Sbjct: 230 LEFSNDGKYLLVGTDYHGHF-VLDAFEGELKAFLVGKNGSPGRAAPVSTTGKPLGQGDAC 288
Query: 259 FSPEGMFVISGSGDG-SVYAWSVRSGKEVASWMSFDTEPP------VIKWTPGSLMFVTG 311
F+P+G +VI GSGD + W ++ + + + P ++++ P M +
Sbjct: 289 FTPDGRYVIGGSGDHHDLLVWDLQQTPDTNLCLQAMAKLPHRGKTAIVEYNPRFNMIASA 348
Query: 312 SSELSFWIP-DLSK 324
E+ FW+P D SK
Sbjct: 349 DKEVYFWLPEDTSK 362
Score = 47 (21.6 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 26/144 (18%), Positives = 62/144 (43%)
Query: 9 EDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC 68
+D++ +++ + M + + Y ++ H + D+S+RL D+ + +
Sbjct: 62 DDEI-IQIFDVKAGKMTKSIPSKKYGAHLARFTHHSRQVLHASTKVDDSLRLLDLHSESY 120
Query: 69 LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR-YFKGHHDRVVSL 127
++ + V + + +VI SK D+++ + L ++Y + K +V+
Sbjct: 121 IRYFSGHTDKVTCLALSPGSDSVISCSK---DDTVSIWDL-GSRYAQGKLKLSTPYLVAF 176
Query: 128 SLCSSKDCFISGSLDRTVLLWDQR 151
+S S S ++LL+D R
Sbjct: 177 DPSASVIAIASQSTS-SILLYDFR 199
>POMBASE|SPAC824.04 [details] [associations]
symbol:SPAC824.04 "WD repeat protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IC]
[GO:0006379 "mRNA cleavage" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC824.04 GO:GO:0005829
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 GO:GO:0005847 GO:GO:0006379
HOGENOM:HOG000176477 OrthoDB:EOG44BFB3 PIR:T39105
RefSeq:NP_593443.1 ProteinModelPortal:Q9UT39 STRING:Q9UT39
EnsemblFungi:SPAC824.04.1 GeneID:2542845 KEGG:spo:SPAC824.04
OMA:LRANACK NextBio:20803886 Uniprot:Q9UT39
Length = 341
Score = 316 (116.3 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 79/240 (32%), Positives = 132/240 (55%)
Query: 20 ILQSMEVGMSFRDYN-GR-ISSMDFHKSSSYLVTA-SDDESIRLYDVTAATCLKTINSKK 76
IL S++ SFRD + G I+S+D+ S Y+ T S D+++++YD + TI +
Sbjct: 5 ILSSLKPAQSFRDNSLGSFINSIDYSDSGEYVATTCSADDTVQIYDALDPKQVHTITCFE 64
Query: 77 YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF 136
G+++ FT H ++ S+ G ++ ++ +S++DNK + YF GH D V S+ + +D F
Sbjct: 65 TGIEVARFTHHDHNLLLSTTKG-NKDIQYVSIYDNKRISYFSGHTDIVSSIEVSPIEDQF 123
Query: 137 ISGSLDRTVLLWDQ-RAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMF--DARKYE 193
+S + D+T+ LW ++ +C G L + AYD GLVFAVA R+F D R Y
Sbjct: 124 VSTANDKTLKLWKMNQSSRCLGNLDLPSLGIPAYDPTGLVFAVACHSLSRIFLYDVRNYG 183
Query: 194 KGPFDIFSVGGD-----------ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS 242
PF F++ + + ++FSNDG+ +LL+T ++LD+F G +LS
Sbjct: 184 SDPFSTFTIDDSRYLSRFSFPPMMPEWKHMEFSNDGKCILLSTRANVHYILDAFSGDVLS 243
Score = 137 (53.3 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 38/123 (30%), Positives = 62/123 (50%)
Query: 212 VKFSNDGRLMLLTTMEGHIHVLDSFRGTLLST---YNVKPVSRN-STLEASFSPEGMFVI 267
++FSNDG+ +LL+T ++LD+F G +LS + P S N +F P+G FVI
Sbjct: 213 MEFSNDGKCILLSTRANVHYILDAFSGDVLSRLEDFQELPFSNNFHGGSTTFVPQGNFVI 272
Query: 268 SGSGDGSVYAWSVR-----SGK----EVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFW 318
+ D ++ W++R GK E P ++K+ P +T S+L FW
Sbjct: 273 GSADDRTLNVWNLRHTFHHKGKTRPPEHRIVSQSIINPGLVKYNPRYDQLLTAGSQLVFW 332
Query: 319 IPD 321
+P+
Sbjct: 333 LPE 335
>WB|WBGene00016374 [details] [associations]
symbol:swd-2.2 species:6239 "Caenorhabditis elegans"
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0043652 "engulfment of apoptotic
cell" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0040035 GO:GO:0043652 EMBL:FO080768 KO:K14962
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 OMA:CTNMAFW
PIR:T34139 RefSeq:NP_501280.1 ProteinModelPortal:Q18403 SMR:Q18403
STRING:Q18403 PaxDb:Q18403 EnsemblMetazoa:C33H5.7 GeneID:177561
KEGG:cel:CELE_C33H5.7 UCSC:C33H5.7 CTD:177561 WormBase:C33H5.7
InParanoid:Q18403 NextBio:897372 Uniprot:Q18403
Length = 326
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 89/309 (28%), Positives = 165/309 (53%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
+E++ E L + D R++S+ + +++ ++DD+S+ LYD+ +++N
Sbjct: 6 VEITAESLAKLTPAKQPNDTTTRVNSLSYGLKGDHMIMSTDDDSMFLYDMNTGLRSRSVN 65
Query: 74 SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 133
SKKYG V F S ++ S D ++R LSL DNKY+RYF+GH V +++
Sbjct: 66 SKKYGCSHVKFASDSMCALHGSTKV-DNTIRYLSLTDNKYIRYFQGHDKLVTGINVSPMD 124
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKY 192
D F+S + D+T+ LWD + C GL+ + P A +D +GL+FA I+++D R +
Sbjct: 125 DMFLSVAEDKTIRLWDLKTHNCIGLMNLSATPIATFDPEGLLFAAGLDNNIIKLYDLRSF 184
Query: 193 EKGPFDIFSV--GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250
+KGPF F D + ++FS G+ +++ T + ++D+F G + T +
Sbjct: 185 DKGPFSSFGPLENEDNVEWTAMRFSPCGKYIMICTNSSQLLLVDAFTGLIKFTLEEHQNA 244
Query: 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFV 309
+ L ASF+PE ++ GS DG +Y + V +G+ ++ + + + +++P +
Sbjct: 245 QKIPLMASFTPESSHIMVGSSDGYIYFYDVETGEIALKTLAPNNQTCHIAEFSPQHFVAA 304
Query: 310 TGSSELSFW 318
T ++L+ W
Sbjct: 305 TADTKLTLW 313
>POMBASE|SPBC18H10.06c [details] [associations]
symbol:swd2 "Set1C complex subunit Swd2.1"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0016571 "histone
methylation" evidence=IMP] [GO:0048188 "Set1C/COMPASS complex"
evidence=IDA] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC18H10.06c GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0048188
GO:GO:0051568 KO:K14962 PIR:T39770 RefSeq:NP_595730.1
ProteinModelPortal:O60137 STRING:O60137
EnsemblFungi:SPBC18H10.06c.1 GeneID:2540788 KEGG:spo:SPBC18H10.06c
HOGENOM:HOG000176477 OrthoDB:EOG44BFB3 NextBio:20801906
Uniprot:O60137
Length = 357
Score = 364 (133.2 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 91/269 (33%), Positives = 151/269 (56%)
Query: 13 SLELSEEILQSMEVGMSFRDYN--GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK 70
++ ++ ++L SM+ ++ N G I+S+ F S + + D++++LY+ + +K
Sbjct: 3 TVSITFDLLSSMQPRKWLKNQNFVGEITSLSFDDSGELCLASCTDDTLQLYNCISGKFVK 62
Query: 71 TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLC 130
++ SKKYG L FT H ++I++S D ++R L + N+YLRYF GH V S+ +
Sbjct: 63 SLASKKYGAHLGRFTHHSNSLIHASTKE-DNTVRYLDVVTNRYLRYFPGHKQTVTSIDVS 121
Query: 131 SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFA-VAFGGY-IRMFD 188
+ + F+S SLD T+ LWD R+ CQGLL V AA+D GL+FA V+ Y I +++
Sbjct: 122 PADETFLSASLDNTIRLWDLRSPNCQGLLNVSSPVVAAFDATGLIFASVSERKYKISLYN 181
Query: 189 ARKYEKGPF-DI--FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL---- 241
+ ++ PF DI + + ANV +FS DG+ +LLTT +V+D++ G+ L
Sbjct: 182 IKSFDARPFQDIPLTFLPPHVRIANV-EFSTDGKYLLLTTGNDFHYVIDAYSGSELLRVP 240
Query: 242 STYNVKPVSRNSTLEAS--FSPEGMFVIS 268
S + K N T AS SP+ F+ +
Sbjct: 241 SKVSTKTQDGNLTYYASACMSPDSKFLFT 269
Score = 42 (19.8 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 296 PPVIKWTPGSLMFVTGSSELSFW 318
P ++++ P VT S + FW
Sbjct: 334 PSIVRFNPRFSQLVTAHSGVIFW 356
>CGD|CAL0004300 [details] [associations]
symbol:SWD2 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005847 "mRNA cleavage
and polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030846 "termination of RNA
polymerase II transcription, poly(A)-coupled" evidence=IEA]
[GO:0031126 "snoRNA 3'-end processing" evidence=IEA] [GO:0051568
"histone H3-K4 methylation" evidence=IEA] [GO:0031124 "mRNA 3'-end
processing" evidence=IEA] [GO:0034729 "histone H3-K79 methylation"
evidence=IEA] [GO:0030847 "termination of RNA polymerase II
transcription, exosome-dependent" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0004300 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
KO:K14962 EMBL:AACQ01000185 EMBL:AACQ01000184 RefSeq:XP_711732.1
RefSeq:XP_711754.1 ProteinModelPortal:Q59PV3 STRING:Q59PV3
GeneID:3646650 GeneID:3646677 KEGG:cal:CaO19.10306
KEGG:cal:CaO19.2790 Uniprot:Q59PV3
Length = 364
Score = 349 (127.9 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 94/300 (31%), Positives = 158/300 (52%)
Query: 4 SQSEREDKVSLELSEEILQSMEVGMSFRDYNGR-ISSMDFHKSSSYLVTASDDESIRLYD 62
S S+ S+ +S L +++ SF + G I+S+DF + + V++ D+SI+LYD
Sbjct: 12 SVSKSSSSNSVYISGTTLAALQPAKSFNYHQGASITSLDFDDAGQFSVSSGIDKSIQLYD 71
Query: 63 VTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS----KNGWDESLRLLSLHDNKYLRYFK 118
T K I S+KYG FT +Y+S + + ++R LSL +N+YLRYFK
Sbjct: 72 CHKGTHSKDIQSQKYGAHSARFTHEELNCLYASTPEPSDNNENAIRYLSLSNNRYLRYFK 131
Query: 119 GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAV 178
GH +V S+ + F+S S D TV LWD ++ G L V +D G+VFA+
Sbjct: 132 GHKAQVSSIEVNPVDKTFLSSSYDGTVKLWDLKSSSAVGNLEVGQNSVIGFDPHGVVFAI 191
Query: 179 ---AFG--GYIRMFDARKYEKGPF---DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHI 230
+ G G + ++D + ++K PF +I + G I N ++FSN+G+L+L++T
Sbjct: 192 GKYSQGETGTVSLYDLKTFDKAPFLHVEIPILPGQIW--NKLEFSNNGKLILISTDSAEH 249
Query: 231 HVLDSFRGTLLSTYN--VKPVSRNSTLE--------ASFSPEGMFVISGSGDGSVYAWSV 280
+VLDS+ G LL+ + V+ N+ + +FSP G +++ G+ ++ + V
Sbjct: 250 YVLDSYSGELLAVVRLAIGSVASNNWMSFKYPYTGCCTFSPCGKYLLVGTPKSTINIYDV 309
Score = 40 (19.1 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 296 PPVIKWTPGSLMFVTGSSELSFWIP 320
P ++ ++P T + ++ W P
Sbjct: 336 PKIVSFSPKMFTLATADTTVTLWSP 360
>SGD|S000001501 [details] [associations]
symbol:SWD2 "Subunit of the COMPASS (Set1C) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0048188 "Set1C/COMPASS
complex" evidence=IPI] [GO:0051568 "histone H3-K4 methylation"
evidence=IDA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0030847 "termination of RNA polymerase II
transcription, exosome-dependent" evidence=IPI] [GO:0030846
"termination of RNA polymerase II transcription, poly(A)-coupled"
evidence=IPI] [GO:0031126 "snoRNA 3'-end processing" evidence=IMP]
[GO:0031124 "mRNA 3'-end processing" evidence=IMP] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IDA]
[GO:0034729 "histone H3-K79 methylation" evidence=IMP] [GO:0005847
"mRNA cleavage and polyadenylation specificity factor complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000001501 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 EMBL:BK006944 EMBL:X74152
GO:GO:0048188 GO:GO:0051568 GO:GO:0000781 GO:GO:0000723 KO:K02138
RefSeq:NP_012909.3 GeneID:853853 KEGG:sce:YKL016C GO:GO:0005847
GO:GO:0031124 GO:GO:0031126 GO:GO:0030846 RefSeq:NP_012907.3
GeneID:853851 KEGG:sce:YKL018W KO:K14962 GO:GO:0030847
GO:GO:0034729 HOGENOM:HOG000176477 OrthoDB:EOG44BFB3 EMBL:Z28018
EMBL:AY558094 PIR:S37831 ProteinModelPortal:P36104 SMR:P36104
DIP:DIP-6844N IntAct:P36104 MINT:MINT-2781635 STRING:P36104
PaxDb:P36104 PeptideAtlas:P36104 EnsemblFungi:YKL018W CYGD:YKL018w
GeneTree:ENSGT00530000063965 OMA:LRYLSMY NextBio:975082
Genevestigator:P36104 GermOnline:YKL018W Uniprot:P36104
Length = 329
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 98/304 (32%), Positives = 153/304 (50%)
Query: 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYS 94
G ++S++F + +L+T+S +++++LY T L TI SKKYG FT IYS
Sbjct: 28 GPVTSLNFDDNGQFLLTSSSNDTMQLYSATNCKFLDTIASKKYGCHSAIFTHAQNECIYS 87
Query: 95 S--KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
S KN +D ++ L+L N+YLRYF GH V L + D F+S S D +V LWD +
Sbjct: 88 STMKN-FD--IKYLNLETNQYLRYFSGHGALVNDLKMNPVNDTFLSSSYDESVRLWDLKI 144
Query: 153 EKCQGLLRVQGRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPFDIFSVG-GDISDA 209
K Q ++ AYD GLVFA+ I +++ +K ++GPF I + S
Sbjct: 145 SKPQVIIPSLVPNCIAYDPSGLVFALGNPENFEIGLYNLKKIQEGPFLIIKINDATFSQW 204
Query: 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGT-LLSTYNVKPVSRNSTLE---ASFSPEGMF 265
N ++FSN+G+ +L+ + G + D+F G L + L+ A F+P+G F
Sbjct: 205 NKLEFSNNGKYLLVGSSIGKHLIFDAFTGQQLFELIGTRAFPMREFLDSGSACFTPDGEF 264
Query: 266 VISGSGDGSVYAWSVR---SGKEVASW-----MSFDTEPPVIKWTPGSLMFVTGSSELSF 317
V+ DG + W+ S K + +S +T P I + P MFVT + F
Sbjct: 265 VLGTDYDGRIAIWNHSDSISNKVLRPQGFIPCVSHETCPRSIAFNPKYSMFVTADETVDF 324
Query: 318 WIPD 321
++ D
Sbjct: 325 YVYD 328
>UNIPROTKB|G4N7I7 [details] [associations]
symbol:MGG_06406 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CM001234
KO:K14962 RefSeq:XP_003717163.1 ProteinModelPortal:G4N7I7
EnsemblFungi:MGG_06406T0 GeneID:2684561 KEGG:mgr:MGG_06406
Uniprot:G4N7I7
Length = 373
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 92/270 (34%), Positives = 138/270 (51%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+ S+DF+ +T+ DE+I+LY+V K + SKKYGV L FT T++IY+S
Sbjct: 56 VLSLDFNDPGDLCMTSESDETIQLYNVREGRHDKNLASKKYGVKLAKFTHSGTSIIYAST 115
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
++++R L DN ++RYF+GH D V +L + D F+S S D TV LWD R++
Sbjct: 116 KQ-NDAIRYLETFDNSFIRYFEGHKDAVTNLEMHPGGDNFLSASRDNTVRLWDIRSKNAV 174
Query: 157 GLLRVQGRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPF---DIFSVGGDISDANV 211
G L + A+D G VFAV G I ++D + Y K PF DI ++ + +
Sbjct: 175 GQLFLNTPYLLAWDPSGEVFAVGSPRSGSILLYDYKNYNKAPFATFDIVEACKEVDPSRL 234
Query: 212 VK------FSNDGRLMLL-TTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 264
++ FSNDG+ +LL T GH+ +LD+F G L + KP S S + A G
Sbjct: 235 LQGWTKLEFSNDGKCILLGTDGTGHL-LLDAFDGKLKANLR-KPDSGTSRV-APGEGSGH 291
Query: 265 FVISGSGD-----GSVYAWSVRSGKEVASW 289
+ SGD + G+ V+ W
Sbjct: 292 GDVESSGDCCFTPDGRFVMGANRGQNVSVW 321
>FB|FBgn0031431 [details] [associations]
symbol:CG3515 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AY089469
ProteinModelPortal:Q8T3W2 SMR:Q8T3W2 PRIDE:Q8T3W2
FlyBase:FBgn0031431 eggNOG:NOG238696 InParanoid:Q8T3W2
OrthoDB:EOG4W0VVH ArrayExpress:Q8T3W2 Bgee:Q8T3W2 Uniprot:Q8T3W2
Length = 395
Score = 265 (98.3 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 74/314 (23%), Positives = 144/314 (45%)
Query: 12 VSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT 71
+S+ L+++ ++ V F + +M+F L+ D ++ ++ T +
Sbjct: 1 MSIRLNDDAMRQFRVAKVFPETKHHTLAMEFSSDGLRLLVC-DHSALSIFSSTRQVQVCK 59
Query: 72 INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSL-SLC 130
+ Y D+ CF T V++S+ D ++R L L+ +R F GH + L S
Sbjct: 60 VPMHHYLPDVACFVQQDTRVLHSTSKH-DYTIRCLDLNTRHCVRVFGGHAKTINRLASQP 118
Query: 131 SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGY-IRMFDA 189
++ FIS D V +WD R + ++ RP A+D +GL A + G I++ D
Sbjct: 119 GGENVFISAGRDDQVYMWDIRVKTHTHRIKNLRRPLCAFDLEGLFLATSSGTEGIQIRDV 178
Query: 190 RKYEKGPFD--IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247
R P ++ V ++ ++F+ +G+ +LL+T + + GT ++
Sbjct: 179 RMMGGEPSRKFVYQVNAK-ANWTQLQFAPNGKSLLLSTDHSWCFSVSAIDGTYQQSFTGY 237
Query: 248 PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPP-VIKWTPGSL 306
L+A+++P+ F++SG+ G ++ W G VA + P +++ P +
Sbjct: 238 SNKLRLPLDATYTPDSQFILSGADKGRIHIWRAADGFPVAVLKGNNMGPVRCMRFNPRAT 297
Query: 307 MFVTGSSELSFWIP 320
MFV+ S + FW+P
Sbjct: 298 MFVSSDSRIVFWMP 311
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 74/297 (24%), Positives = 138/297 (46%)
Query: 3 GSQSEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYD 62
G+ + S + S + + + + + +S++ F + +L ++S D+ I+++
Sbjct: 41 GATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWG 100
Query: 63 VTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHD 122
KTI+ K G+ V ++S ++ S D++L++ L K L+ KGH +
Sbjct: 101 AYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD---DKTLKVWELSTGKSLKTLKGHSN 157
Query: 123 RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYD---DQGLVFAVA 179
V + + +SGS D +V +WD R KC L P +A D L+ + +
Sbjct: 158 YVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 217
Query: 180 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT 239
+ G R++D G + D + VKFS +G+ +L T++ + + D +G
Sbjct: 218 YDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 274
Query: 240 LLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGDGSVYAWSVRSGKEVASWMSFDTE 295
L TY + + A+FS G +++SGS D VY W+++S KEV + T+
Sbjct: 275 CLKTYTGHK-NEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQS-KEVVQKLQGHTD 329
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 69/263 (26%), Positives = 128/263 (48%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+SS+ F + +L ++S D+ I+++ KTI+ K G+ V ++S ++ +S
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D++L++ + K L+ KGH + V + + +SGS D +V +WD + KC
Sbjct: 108 ---DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL 164
Query: 157 GLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L P +A D L+ + ++ G R++D G + D + VK
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVK 221
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGD 272
FS +G+ +L T++ + + D +G L TY + + A+FS G +++SGS D
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHK-NEKYCIFANFSVTGGKWIVSGSED 280
Query: 273 GSVYAWSVRSGKEVASWMSFDTE 295
VY W++++ KEV + T+
Sbjct: 281 NLVYIWNLQT-KEVVQKLQGHTD 302
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+ + ++ + +F+ S+ +V+ S DES+R++DV CLKT+ + V V F
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLL 147
+ ++ SS +D R+ + L+ + VS S +I + +LD T+ L
Sbjct: 184 SLIVSSS---YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 148 WDQRAEKC 155
WD KC
Sbjct: 241 WDYSKGKC 248
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 68/263 (25%), Positives = 128/263 (48%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+SS+ F + +L ++S D+ I+++ KTI+ K G+ V ++S ++ +S
Sbjct: 22 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 81
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D++L++ + K L+ KGH + V + + +SGS D +V +WD + KC
Sbjct: 82 ---DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL 138
Query: 157 GLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L P +A D L+ + ++ G R++D G + D + VK
Sbjct: 139 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVK 195
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGD 272
FS +G+ +L T++ + + D +G L TY + + A+FS G +++SGS D
Sbjct: 196 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK-NEKYCIFANFSVTGGKWIVSGSED 254
Query: 273 GSVYAWSVRSGKEVASWMSFDTE 295
VY W++++ KE+ + T+
Sbjct: 255 NLVYIWNLQT-KEIVQKLQGHTD 276
Score = 123 (48.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+ + ++ + +F+ S+ +V+ S DES+R++DV CLKT+ + V V F
Sbjct: 98 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 157
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLL 147
+ ++ SS +D R+ + L+ + VS S +I + +LD T+ L
Sbjct: 158 SLIVSSS---YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 214
Query: 148 WDQRAEKC 155
WD KC
Sbjct: 215 WDYSKGKC 222
Score = 112 (44.5 bits), Expect = 0.00084, P = 0.00084
Identities = 51/233 (21%), Positives = 95/233 (40%)
Query: 111 NKYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW---DQRAEKCQGLLRVQGRPA 166
N L++ GH V S+ + + S S D+ + +W D + EK ++
Sbjct: 8 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 67
Query: 167 AAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM 226
A D L+ + + ++++D G + ++ G + F+ L++ +
Sbjct: 68 AWSSDSNLLVSASDDKTLKIWDV---SSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSF 123
Query: 227 EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV 286
+ + + D G L T P + F+ +G ++S S DG W SG+ +
Sbjct: 124 DESVRIWDVKTGKCLKTL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 180
Query: 287 ASWMSFDTEPPV--IKWTPGS--LMFVTGSSELSFWIPDLSK---LGAYVGRK 332
+ + D PPV +K++P ++ T + L W D SK L Y G K
Sbjct: 181 KTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW--DYSKGKCLKTYTGHK 230
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 68/263 (25%), Positives = 128/263 (48%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+SS+ F + +L ++S D+ I+++ KTI+ K G+ V ++S ++ +S
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D++L++ + K L+ KGH + V + + +SGS D +V +WD + KC
Sbjct: 108 ---DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL 164
Query: 157 GLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L P +A D L+ + ++ G R++D G + D + VK
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVK 221
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGD 272
FS +G+ +L T++ + + D +G L TY + + A+FS G +++SGS D
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK-NEKYCIFANFSVTGGKWIVSGSED 280
Query: 273 GSVYAWSVRSGKEVASWMSFDTE 295
VY W++++ KE+ + T+
Sbjct: 281 NLVYIWNLQT-KEIVQKLQGHTD 302
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+ + ++ + +F+ S+ +V+ S DES+R++DV CLKT+ + V V F
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLL 147
+ ++ SS +D R+ + L+ + VS S +I + +LD T+ L
Sbjct: 184 SLIVSSS---YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 148 WDQRAEKC 155
WD KC
Sbjct: 241 WDYSKGKC 248
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 51/233 (21%), Positives = 95/233 (40%)
Query: 111 NKYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW---DQRAEKCQGLLRVQGRPA 166
N L++ GH V S+ + + S S D+ + +W D + EK ++
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 167 AAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM 226
A D L+ + + ++++D G + ++ G + F+ L++ +
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDV---SSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 227 EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV 286
+ + + D G L T P + F+ +G ++S S DG W SG+ +
Sbjct: 150 DESVRIWDVKTGKCLKTL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 287 ASWMSFDTEPPV--IKWTPGS--LMFVTGSSELSFWIPDLSK---LGAYVGRK 332
+ + D PPV +K++P ++ T + L W D SK L Y G K
Sbjct: 207 KTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW--DYSKGKCLKTYTGHK 256
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 68/263 (25%), Positives = 128/263 (48%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+SS+ F + +L ++S D+ I+++ KTI+ K G+ V ++S ++ +S
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D++L++ + K L+ KGH + V + + +SGS D +V +WD + KC
Sbjct: 108 ---DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL 164
Query: 157 GLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L P +A D L+ + ++ G R++D G + D + VK
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVK 221
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGD 272
FS +G+ +L T++ + + D +G L TY + + A+FS G +++SGS D
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK-NEKYCIFANFSVTGGKWIVSGSED 280
Query: 273 GSVYAWSVRSGKEVASWMSFDTE 295
VY W++++ KE+ + T+
Sbjct: 281 NLVYIWNLQT-KEIVQKLQGHTD 302
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+ + ++ + +F+ S+ +V+ S DES+R++DV CLKT+ + V V F
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLL 147
+ ++ SS +D R+ + L+ + VS S +I + +LD T+ L
Sbjct: 184 SLIVSSS---YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 148 WDQRAEKC 155
WD KC
Sbjct: 241 WDYSKGKC 248
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 51/233 (21%), Positives = 95/233 (40%)
Query: 111 NKYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW---DQRAEKCQGLLRVQGRPA 166
N L++ GH V S+ + + S S D+ + +W D + EK ++
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 167 AAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM 226
A D L+ + + ++++D G + ++ G + F+ L++ +
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDV---SSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 227 EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV 286
+ + + D G L T P + F+ +G ++S S DG W SG+ +
Sbjct: 150 DESVRIWDVKTGKCLKTL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 287 ASWMSFDTEPPV--IKWTPGS--LMFVTGSSELSFWIPDLSK---LGAYVGRK 332
+ + D PPV +K++P ++ T + L W D SK L Y G K
Sbjct: 207 KTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW--DYSKGKCLKTYTGHK 256
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 68/263 (25%), Positives = 128/263 (48%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+SS+ F + +L ++S D+ I+++ KTI+ K G+ V ++S ++ +S
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D++L++ + K L+ KGH + V + + +SGS D +V +WD + KC
Sbjct: 108 ---DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL 164
Query: 157 GLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L P +A D L+ + ++ G R++D G + D + VK
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVK 221
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGD 272
FS +G+ +L T++ + + D +G L TY + + A+FS G +++SGS D
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK-NEKYCIFANFSVTGGKWIVSGSED 280
Query: 273 GSVYAWSVRSGKEVASWMSFDTE 295
VY W++++ KE+ + T+
Sbjct: 281 NLVYIWNLQT-KEIVQKLQGHTD 302
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+ + ++ + +F+ S+ +V+ S DES+R++DV CLKT+ + V V F
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLL 147
+ ++ SS +D R+ + L+ + VS S +I + +LD T+ L
Sbjct: 184 SLIVSSS---YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 148 WDQRAEKC 155
WD KC
Sbjct: 241 WDYSKGKC 248
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 51/233 (21%), Positives = 95/233 (40%)
Query: 111 NKYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW---DQRAEKCQGLLRVQGRPA 166
N L++ GH V S+ + + S S D+ + +W D + EK ++
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 167 AAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM 226
A D L+ + + ++++D G + ++ G + F+ L++ +
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDV---SSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 227 EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV 286
+ + + D G L T P + F+ +G ++S S DG W SG+ +
Sbjct: 150 DESVRIWDVKTGKCLKTL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 287 ASWMSFDTEPPV--IKWTPGS--LMFVTGSSELSFWIPDLSK---LGAYVGRK 332
+ + D PPV +K++P ++ T + L W D SK L Y G K
Sbjct: 207 KTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW--DYSKGKCLKTYTGHK 256
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 68/263 (25%), Positives = 128/263 (48%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+SS+ F + +L ++S D+ I+++ KTI+ K G+ V ++S ++ +S
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D++L++ + K L+ KGH + V + + +SGS D +V +WD + KC
Sbjct: 108 ---DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL 164
Query: 157 GLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L P +A D L+ + ++ G R++D G + D + VK
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVK 221
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGD 272
FS +G+ +L T++ + + D +G L TY + + A+FS G +++SGS D
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK-NEKYCIFANFSVTGGKWIVSGSED 280
Query: 273 GSVYAWSVRSGKEVASWMSFDTE 295
VY W++++ KE+ + T+
Sbjct: 281 NLVYIWNLQT-KEIVQKLQGHTD 302
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+ + ++ + +F+ S+ +V+ S DES+R++DV CLKT+ + V V F
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLL 147
+ ++ SS +D R+ + L+ + VS S +I + +LD T+ L
Sbjct: 184 SLIVSSS---YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 148 WDQRAEKC 155
WD KC
Sbjct: 241 WDYSKGKC 248
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 51/233 (21%), Positives = 95/233 (40%)
Query: 111 NKYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW---DQRAEKCQGLLRVQGRPA 166
N L++ GH V S+ + + S S D+ + +W D + EK ++
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 167 AAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM 226
A D L+ + + ++++D G + ++ G + F+ L++ +
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDV---SSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 227 EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV 286
+ + + D G L T P + F+ +G ++S S DG W SG+ +
Sbjct: 150 DESVRIWDVKTGKCLKTL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 287 ASWMSFDTEPPV--IKWTPGS--LMFVTGSSELSFWIPDLSK---LGAYVGRK 332
+ + D PPV +K++P ++ T + L W D SK L Y G K
Sbjct: 207 KTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW--DYSKGKCLKTYTGHK 256
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 68/263 (25%), Positives = 128/263 (48%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+SS+ F + +L ++S D+ I+++ KTI+ K G+ V ++S ++ +S
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D++L++ + K L+ KGH + V + + +SGS D +V +WD + KC
Sbjct: 108 ---DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL 164
Query: 157 GLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L P +A D L+ + ++ G R++D G + D + VK
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVK 221
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGD 272
FS +G+ +L T++ + + D +G L TY + + A+FS G +++SGS D
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK-NEKYCIFANFSVTGGKWIVSGSED 280
Query: 273 GSVYAWSVRSGKEVASWMSFDTE 295
VY W++++ KE+ + T+
Sbjct: 281 NLVYIWNLQT-KEIVQKLQGHTD 302
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+ + ++ + +F+ S+ +V+ S DES+R++DV CLKT+ + V V F
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLL 147
+ ++ SS +D R+ + L+ + VS S +I + +LD T+ L
Sbjct: 184 SLIVSSS---YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 148 WDQRAEKC 155
WD KC
Sbjct: 241 WDYSKGKC 248
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 51/233 (21%), Positives = 95/233 (40%)
Query: 111 NKYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW---DQRAEKCQGLLRVQGRPA 166
N L++ GH V S+ + + S S D+ + +W D + EK ++
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 167 AAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM 226
A D L+ + + ++++D G + ++ G + F+ L++ +
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDV---SSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 227 EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV 286
+ + + D G L T P + F+ +G ++S S DG W SG+ +
Sbjct: 150 DESVRIWDVKTGKCLKTL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 287 ASWMSFDTEPPV--IKWTPGS--LMFVTGSSELSFWIPDLSK---LGAYVGRK 332
+ + D PPV +K++P ++ T + L W D SK L Y G K
Sbjct: 207 KTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW--DYSKGKCLKTYTGHK 256
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 249 (92.7 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 66/264 (25%), Positives = 129/264 (48%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
ISS F YL T+S D++++++++ C +T+ K GV+ + ++S V+ +S
Sbjct: 90 ISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASD 149
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D++L++ + ++ + KGH++ V + +SGS D +V +WD + C
Sbjct: 150 ---DKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI 206
Query: 157 GLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L P +A D L+ + ++ G +R++D G V + VK
Sbjct: 207 KTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN---GQCIKTLVDDENPPVAFVK 263
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGD 272
FS +G+ +L + ++ + + D +G L Y S+ A+FS G ++ISGS D
Sbjct: 264 FSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIF-ANFSVTGGKWIISGSED 322
Query: 273 GSVYAWSVRSGKEVASWMSFDTEP 296
+Y W++++ +E+ + T+P
Sbjct: 323 CKIYIWNLQT-REIVQCLEGHTQP 345
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 37/145 (25%), Positives = 69/145 (47%)
Query: 6 SEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA 65
S +DK +L++ E + M + + +N + +F+ SS +V+ S DES+R++DV
Sbjct: 146 SASDDK-TLKIFEIVTSRMT--KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 66 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 125
C+KT+ + V V F + + S +D +R+ + + ++ + V
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGS---YDGLVRIWDTANGQCIKTLVDDENPPV 259
Query: 126 SLSLCSSKDCFISGS-LDRTVLLWD 149
+ S +I S LD T+ LWD
Sbjct: 260 AFVKFSPNGKYILASNLDSTLKLWD 284
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 40/179 (22%), Positives = 81/179 (45%)
Query: 12 VSLELSEEI-LQSMEVGMSFRD---YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT 67
VS E + + ++ GM + ++ +S++ F++ S + + S D +R++D
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 68 CLKT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDR--- 123
C+KT ++ + V V F+ + ++ S+ D +L+L K L+ + GH +
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNL---DSTLKLWDFSKGKTLKQYTGHENSKYC 303
Query: 124 -VVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFG 181
+ S+ K ISGS D + +W+ + + L +P A D + +A G
Sbjct: 304 IFANFSVTGGK-WIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 249 (92.7 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 66/264 (25%), Positives = 129/264 (48%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
ISS F YL T+S D++++++++ C +T+ K GV+ + ++S V+ +S
Sbjct: 90 ISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASD 149
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D++L++ + ++ + KGH++ V + +SGS D +V +WD + C
Sbjct: 150 ---DKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI 206
Query: 157 GLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L P +A D L+ + ++ G +R++D G V + VK
Sbjct: 207 KTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN---GQCIKTLVDDENPPVAFVK 263
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGD 272
FS +G+ +L + ++ + + D +G L Y S+ A+FS G ++ISGS D
Sbjct: 264 FSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIF-ANFSVTGGKWIISGSED 322
Query: 273 GSVYAWSVRSGKEVASWMSFDTEP 296
+Y W++++ +E+ + T+P
Sbjct: 323 CKIYIWNLQT-REIVQCLEGHTQP 345
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 37/145 (25%), Positives = 69/145 (47%)
Query: 6 SEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA 65
S +DK +L++ E + M + + +N + +F+ SS +V+ S DES+R++DV
Sbjct: 146 SASDDK-TLKIFEIVTSRMT--KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 66 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 125
C+KT+ + V V F + + S +D +R+ + + ++ + V
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGS---YDGLVRIWDTANGQCIKTLVDDENPPV 259
Query: 126 SLSLCSSKDCFISGS-LDRTVLLWD 149
+ S +I S LD T+ LWD
Sbjct: 260 AFVKFSPNGKYILASNLDSTLKLWD 284
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 40/179 (22%), Positives = 81/179 (45%)
Query: 12 VSLELSEEI-LQSMEVGMSFRD---YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT 67
VS E + + ++ GM + ++ +S++ F++ S + + S D +R++D
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 68 CLKT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDR--- 123
C+KT ++ + V V F+ + ++ S+ D +L+L K L+ + GH +
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNL---DSTLKLWDFSKGKTLKQYTGHENSKYC 303
Query: 124 -VVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFG 181
+ S+ K ISGS D + +W+ + + L +P A D + +A G
Sbjct: 304 IFANFSVTGGK-WIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 70/272 (25%), Positives = 132/272 (48%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87
++ ++ ISS+ F + +L +++ D I ++ C KT+ + V ++S
Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSD 92
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
+ ++ +S D++L++ + K L+ KGH D V + +SGS D +V +
Sbjct: 93 SSRLVSASD---DKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKI 149
Query: 148 WDQRAEKCQGLLRVQGRPAAA--YDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGG 204
W+ + KC L P +A ++ G L+ + ++ G R++DA + + G
Sbjct: 150 WEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQC--LRTLADEG 207
Query: 205 DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 264
+ + VKFS +G+ +L T++ + + D RG L TY + L ASFS G
Sbjct: 208 N-PPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHK-NEKYCLFASFSVTGR 265
Query: 265 -FVISGSGDGSVYAWSVRSGKEVASWMSFDTE 295
+V+SGS D VY W++++ KE+ + T+
Sbjct: 266 KWVVSGSEDNMVYIWNLQT-KEIVQRLQGHTD 296
Score = 115 (45.5 bits), Expect = 0.00044, P = 0.00044
Identities = 33/122 (27%), Positives = 62/122 (50%)
Query: 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVC-FTSHPTT-- 90
N +S + F + Y++TA+ D +++L+D + CLKT K + C F S T
Sbjct: 208 NPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKN--EKYCLFASFSVTGR 265
Query: 91 --VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL--DRTVL 146
V+ S+ D + + +L + ++ +GH D V+S + +K+ S +L D+T+
Sbjct: 266 KWVVSGSE---DNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIK 322
Query: 147 LW 148
+W
Sbjct: 323 VW 324
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 237 (88.5 bits), Expect = 7.8e-19, P = 7.8e-19
Identities = 68/283 (24%), Positives = 136/283 (48%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
IS++ F +L T+S D+++++++++ +C +T+ K GV+ +++ +++ +S
Sbjct: 82 ISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASD 141
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D++L++ + K + KGH + V + +SGS D +V +WD R C
Sbjct: 142 ---DKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCV 198
Query: 157 GLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L P +A D L+ + ++ G +R++D G V + VK
Sbjct: 199 KTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTAN---GQCVKTLVDDENPPVAFVK 255
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGD 272
FS +G+ +L + ++ + + D +G L Y + + A+FS G ++ISGS D
Sbjct: 256 FSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHE-NNKYCIFANFSVTGGKWIISGSED 314
Query: 273 GSVYAWSVRSGKEVASWMSFDTEPPVIK-WTPGSLMFVTGSSE 314
+Y W++++ KEV + T+ + P M +G+ E
Sbjct: 315 CKIYVWNLQT-KEVVQSLEGHTQAVIASDCHPMQNMIASGALE 356
Score = 115 (45.5 bits), Expect = 0.00054, P = 0.00054
Identities = 34/142 (23%), Positives = 71/142 (50%)
Query: 9 EDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC 68
+DK +L++ E + ++++ + + + + +F+ SS +V+ S DES+R++DV C
Sbjct: 141 DDK-TLKIYE--VPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMC 197
Query: 69 LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLS 128
+KT+ + V V F + + S +D +R+ + + ++ + V+
Sbjct: 198 VKTLPAHSDPVSAVSFNRDGSLITSGS---YDGLVRIWDTANGQCVKTLVDDENPPVAFV 254
Query: 129 LCSSKDCFI-SGSLDRTVLLWD 149
S +I S +LD T+ LWD
Sbjct: 255 KFSPNGKYILSSNLDNTLKLWD 276
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 218 (81.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 66/252 (26%), Positives = 119/252 (47%)
Query: 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYS 94
G + ++ F+ +YL+T D+S++L+ V+ T LKT + Y V L S+ + + S
Sbjct: 26 GAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEV-LDADGSYDNSQLCS 84
Query: 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-- 152
+ D+++ L + + R +GH +V + +SGS+D TV WD R+
Sbjct: 85 CSS--DKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRR 142
Query: 153 -EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANV 211
E Q L Q ++ + + + G +R +D R G + +G I+
Sbjct: 143 MEPIQILDESQDGISSLKVSEHELLTGSVDGRVRRYDLRM---GQLQVDYIGSPIT---C 196
Query: 212 VKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 271
V FS DG+ L ++++ + +LD G +L Y+ V++ L+ + + V+S S
Sbjct: 197 VCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGH-VNKGYKLDCCLTDKDTHVLSCSE 255
Query: 272 DGSVYAWSVRSG 283
DG VY W + G
Sbjct: 256 DGHVYYWDLVEG 267
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 218 (81.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 68/290 (23%), Positives = 131/290 (45%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-----ATCLKTINSKKYGVDLVCFTSH 87
+N +SS+ F L +AS D++IR Y + A ++ + G+ V F+S
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
++ +S D++L+L + ++ GH + ++ + +SGS D TV +
Sbjct: 83 ARFIVSASD---DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 148 WDQRAEKCQGLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG 204
WD KC +L P A D D L+ + ++ G R++D+ G +
Sbjct: 140 WDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT---GHCVKTLIDD 196
Query: 205 DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS-PEG 263
+ + V+FS +G+ +L+ T++ + + + L TY V+ + ++FS G
Sbjct: 197 ENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH-VNAQYCISSAFSVTNG 255
Query: 264 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPV-IKWTPGSLMFVTGS 312
++SGS D V+ W + S K++ + TE + + P + +GS
Sbjct: 256 KRIVSGSEDNCVHMWELNS-KKLLQKLEGHTETVMNVACHPTENLIASGS 304
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 35/141 (24%), Positives = 63/141 (44%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT-INSKKYGVDLVCFTSHP 88
F + IS + F + ++V+ASDD++++L+DV + +KT I Y C +P
Sbjct: 67 FTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAF---CVNFNP 123
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
+ + S +DE++R+ + K L+ H D V ++ +S S D +W
Sbjct: 124 QSNMIVS-GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Query: 149 DQRAEKCQGLLRVQGRPAAAY 169
D C L P ++
Sbjct: 183 DSGTGHCVKTLIDDENPPVSF 203
Score = 133 (51.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 30/125 (24%), Positives = 68/125 (54%)
Query: 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN---SKKYGVDLVCFTSHP 88
D N +S + F + +++ + D ++RL+++++A LKT + +Y + ++
Sbjct: 196 DENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNG 255
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
++ S+ D + + L+ K L+ +GH + V++++ +++ SGSLD+TV +W
Sbjct: 256 KRIVSGSE---DNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Query: 149 DQRAE 153
Q+ E
Sbjct: 313 TQKKE 317
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 211 (79.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 68/273 (24%), Positives = 129/273 (47%)
Query: 15 ELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS 74
EL ++ L++++ G G + ++ F+ +Y +T D++++L++ T L+T +
Sbjct: 12 ELPQKRLKTLDCGQ------GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG 65
Query: 75 KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 134
Y V L S + + S G D+++ L + + +R F+GH +V ++
Sbjct: 66 HGYEV-LDAAGSFDNSSLCSG--GGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEAT 122
Query: 135 CFISGSLDRTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFAVAFGGYIRMFDAR 190
+SGS+D T+ WD R+ K + + + G + D V A + G +R +D R
Sbjct: 123 VILSGSIDSTIRCWDCRSRKPEPVQTLDEARDGISSVKVSDHE-VLAGSVDGRVRRYDLR 181
Query: 191 KYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250
+ F + VG I+ + FS DG+ L+++++ + +LD G LL Y +
Sbjct: 182 MGQL--FSDY-VGSPIT---CICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHK-N 234
Query: 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283
+ L+ S V+S S DG V+ W + G
Sbjct: 235 KEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEG 267
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 219 (82.2 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 69/292 (23%), Positives = 131/292 (44%)
Query: 17 SEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC-LK-TINS 74
S+E+ + F ++G ++++ F S L T D ++L++V C K +++
Sbjct: 305 SKEVRVPVTAVCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSG 364
Query: 75 KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 134
G+ + F S + ++ +S D + R+ ++ D + GH +V+S
Sbjct: 365 SNAGITSIEFDSAGSYLLAASN---DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNA 421
Query: 135 CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEK 194
+SGS DRT+ LWD R++ C + + V + F IR +D R +
Sbjct: 422 RIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRYNTR 481
Query: 195 GPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNST 254
+ S+G + +F+ + +L + + + ++D + T++ S
Sbjct: 482 S---LVSLGQLLGKQTASRFNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSD 538
Query: 255 -LEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPV--IKWTP 303
FSP+G +V +GS +GS+Y WSV SGK V +S P+ + W+P
Sbjct: 539 WTRVVFSPDGSYVAAGSAEGSLYVWSVLSGK-VEKVLSKHHSSPINAVAWSP 589
>UNIPROTKB|C9JBU3 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0051568 "histone H3-K4
methylation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
GO:GO:0005634 Gene3D:2.130.10.10 GO:GO:0051568 HGNC:HGNC:28826
ChiTaRS:WDR82 EMBL:AC092045 IPI:IPI00797468
ProteinModelPortal:C9JBU3 SMR:C9JBU3 STRING:C9JBU3
Ensembl:ENST00000469000 ArrayExpress:C9JBU3 Bgee:C9JBU3
Uniprot:C9JBU3
Length = 74
Score = 193 (73.0 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG-YIRMFDARKY 192
D FISGSLD+T+ LWD R+ CQGL+ +QG+P ++D +GL+FA ++++D R +
Sbjct: 6 DTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSF 65
Query: 193 EKGPFDIF 200
+KGPF F
Sbjct: 66 DKGPFATF 73
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 213 (80.0 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 69/289 (23%), Positives = 132/289 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK--TINSKKYGVDLVCFTSH 87
F ++G ++++ F S L T D ++L++V C +++ G+ + F S
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSA 377
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
+ ++ +S D + R+ ++ DN+ GH +V+S +SGS DRT+ L
Sbjct: 378 GSYLLAASN---DFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKL 434
Query: 148 WDQRAEKCQGLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG 204
WD R++ C ++ ++ D + V + F IR +D R + + G
Sbjct: 435 WDLRSKVCN--IKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRT--ESIVKELELLG 490
Query: 205 DISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNST-LEASFSPE 262
I+ ++ N R LLT + + + ++D G + T++ + S FSP+
Sbjct: 491 RITALDL----NSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRVVFSPD 546
Query: 263 GMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFVT 310
G +V +GS DG++Y W+V +GK + + P + W+P V+
Sbjct: 547 GNYVAAGSADGALYVWNVLTGKLERTLAKHHSSPINAVAWSPAGAHVVS 595
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 63/254 (24%), Positives = 103/254 (40%)
Query: 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIY 93
N I+S++F + SYL+ AS+D + R++ V T+ V F ++
Sbjct: 366 NAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIVS 425
Query: 94 SSKNGWDESLRLLSLHDN--KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151
S D +L+L L F G + +C+ + C +SG D+ + WD R
Sbjct: 426 GSH---DRTLKLWDLRSKVCNIKTVFAGSSCNDI---VCTEQ-CVMSGHFDKKIRFWDIR 478
Query: 152 AEKCQGLLRVQGRPAAA--YDDQGLVFAVAFGGYIRMFDARKYE-KGPFDI--FSVGGDI 206
E L + GR A ++ + + +++ D R K F F G
Sbjct: 479 TESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCG--- 535
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA-SFSPEGMF 265
SD V FS DG + + +G ++V + G L T K +S + A ++SP G
Sbjct: 536 SDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTL-AK--HHSSPINAVAWSPAGAH 592
Query: 266 VISGSGDGSVYAWS 279
V+S WS
Sbjct: 593 VVSVDKGNKAVLWS 606
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 204 (76.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 68/273 (24%), Positives = 128/273 (46%)
Query: 15 ELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS 74
EL ++ L++++ G G + ++ F+ +Y +T D++++L++ T L+T +
Sbjct: 12 ELPQKRLKTLDCGQ------GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG 65
Query: 75 KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 134
Y V L S + + S G D+++ L + + +R F+GH +V ++
Sbjct: 66 HGYEV-LDAAGSFDNSSLCSG--GGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEAT 122
Query: 135 CFISGSLDRTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFAVAFGGYIRMFDAR 190
+SGS+D +V WD R+ K + + + G + D V A + G +R +D R
Sbjct: 123 VILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHE-VLAGSVDGRVRRYDLR 181
Query: 191 KYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250
+ F + VG I+ FS DG+ L+++++ + +LD G LL Y +
Sbjct: 182 MGQL--FSDY-VGSPIT---CTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHK-N 234
Query: 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283
+ L+ S V+S S DG V+ W + G
Sbjct: 235 QEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEG 267
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 203 (76.5 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 66/272 (24%), Positives = 127/272 (46%)
Query: 15 ELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS 74
EL ++ L++++ G G + ++ F+ +Y +T D++++L++ T L+T +
Sbjct: 12 ELPQKRLKTLDCGQ------GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG 65
Query: 75 KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 134
Y V L S + + S G D+++ L + + +R F+GH +V ++
Sbjct: 66 HGYEV-LDAAGSFDNSSLCSG--GGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEAT 122
Query: 135 CFISGSLDRTVLLWD---QRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARK 191
+SGS+D ++ WD +R E Q L + ++ + A + G +R +D R
Sbjct: 123 VILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSVKVSDHEILAGSVDGRVRRYDLRM 182
Query: 192 YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 251
+ F + VG I+ FS DG+ L+++++ + +LD G LL Y ++
Sbjct: 183 GQL--FSDY-VGSPIT---CTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYKGHK-NQ 235
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283
L+ S V+S S DG V+ W + G
Sbjct: 236 EYKLDCCLSERDTHVVSCSEDGKVFFWDLVEG 267
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 203 (76.5 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 68/273 (24%), Positives = 127/273 (46%)
Query: 15 ELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS 74
EL + L++++ G G + ++ F+ +Y +T D++++L++ T L+T +
Sbjct: 12 ELPRKQLKTLDCGQ------GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG 65
Query: 75 KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 134
Y V L S + + S G D+++ L + + +R F+GH +V ++
Sbjct: 66 HGYEV-LDAAGSFDNSHLCSG--GGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEAT 122
Query: 135 CFISGSLDRTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFAVAFGGYIRMFDAR 190
+SGS+D +V WD R+ K + + + G + D ++ A + G +R +D R
Sbjct: 123 VILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEIL-AGSVDGRVRRYDLR 181
Query: 191 KYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250
G VG I+ FS DG+ L+++++ + +LD G LL Y V +
Sbjct: 182 M---GQVTSDYVGSPIT---CTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEY-VGHKN 234
Query: 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283
+ L+ S V+S S DG V+ W + G
Sbjct: 235 QKYKLDCCLSERDTHVVSCSEDGKVFFWDLVEG 267
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 204 (76.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 59/261 (22%), Positives = 129/261 (49%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
ISS+ F +L +AS D++I+++ +T+ K G+ + + S + +I S+
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAW-SQDSKLICSAS 107
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
+ D+++++ + K ++ KGH + V +S + +SGS D V +WD +C
Sbjct: 108 D--DKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECT 165
Query: 157 GLLRVQGRPAAA--YDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
++ P ++ G LV + ++ G +R++D + + S D + + VK
Sbjct: 166 KMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQL--LNTISTE-DGKEVSFVK 222
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNVKPVSRNSTLEASFSPE-GMFVISGS 270
FS +G+ +L T++ + L S+ L TY + + ++FS G ++++GS
Sbjct: 223 FSPNGKFVLAGTLDNTLR-LWSYNNNKKCLKTYTGHK-NEKYCIFSTFSVTCGKWIVTGS 280
Query: 271 GDGSVYAWSVRSGKEVASWMS 291
D +Y +++++ +E+ ++
Sbjct: 281 EDNLIYIYNLQT-REIVQTLA 300
Score = 121 (47.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 54/233 (23%), Positives = 101/233 (43%)
Query: 111 NKYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAA 167
N L+Y KGH + S+ S S D+T+ +W K + L +G
Sbjct: 35 NYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDI 94
Query: 168 AYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM 226
A+ D L+ + + I+++D E G + ++ G V F+ L++ +
Sbjct: 95 AWSQDSKLICSASDDKTIKIWDV---ESGKM-VKTLKGHKEYVFGVSFNPQSNLIVSGSF 150
Query: 227 EGHIHVLDSFRG--TLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK 284
+ ++ + D G T + + + PV+ F+ +G V+SGS DG+V W +G+
Sbjct: 151 DENVRIWDVNTGECTKMISAHSDPVTG-----VHFNRDGTLVVSGSYDGTVRIWDTTTGQ 205
Query: 285 EVASWMSFD-TEPPVIKWTPGSLMFVTGSSE--LSFWIPDLSK--LGAYVGRK 332
+ + + D E +K++P + G+ + L W + +K L Y G K
Sbjct: 206 LLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHK 258
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 34/137 (24%), Positives = 65/137 (47%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
++S ++ + + + + + F+ S+ +V+ S DE++R++DV C K I++ V
Sbjct: 117 VESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVT 176
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SG 139
V F T V+ S +D ++R+ + L + VS S F+ +G
Sbjct: 177 GVHFNRDGTLVVSGS---YDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAG 233
Query: 140 SLDRTVLLWD-QRAEKC 155
+LD T+ LW +KC
Sbjct: 234 TLDNTLRLWSYNNNKKC 250
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 202 (76.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 68/273 (24%), Positives = 128/273 (46%)
Query: 15 ELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS 74
EL ++ +++++ G G + ++ F+ +Y +T D++++L++ T L+T +
Sbjct: 12 ELPQKRVKTLDCGQ------GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG 65
Query: 75 KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 134
Y V L S + + S G D+++ L + + +R F+GH +V ++
Sbjct: 66 HGYEV-LDAAGSFDNSSLCSG--GGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEAT 122
Query: 135 CFISGSLDRTVLLWD---QRAEKCQGLLRVQ-GRPAAAYDDQGLVFAVAFGGYIRMFDAR 190
+SGS+D ++ WD +R E Q L + G + D V + + G +R +D R
Sbjct: 123 VILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGISSVKVSDHE-VLSGSVDGRVRRYDLR 181
Query: 191 KYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250
+ F + VG I+ FS DG+ L+++++ + +LD G LL Y +
Sbjct: 182 MGQL--FSDY-VGSPIT---CTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHK-N 234
Query: 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283
+ L+ S V+S S DG VY W + G
Sbjct: 235 QEYKLDCCLSERDTHVVSCSEDGKVYFWDLVEG 267
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 202 (76.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 64/253 (25%), Positives = 118/253 (46%)
Query: 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYS 94
G + ++ F+ +Y +T D++++L++ T L+T + Y V L S + + S
Sbjct: 26 GAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEV-LDAAGSFDNSHLCS 84
Query: 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
G D+++ L + + +R F+GH +V ++ +SGS+D +V WD R+ K
Sbjct: 85 G--GGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRK 142
Query: 155 CQGLLRVQ----GRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDAN 210
+ + + G + D ++ A + G +R +D R G VG I+
Sbjct: 143 PEPVQTLDEARDGISSVKVSDHEIL-AGSVDGRVRRYDLRM---GQVSSDYVGSPIT--- 195
Query: 211 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270
FS DG+ L+++++ + +LD G LL Y V ++ L+ S V+S S
Sbjct: 196 CTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEY-VGHKNQQYKLDCCLSERDTHVVSCS 254
Query: 271 GDGSVYAWSVRSG 283
DG V+ W + G
Sbjct: 255 EDGKVFFWDLVEG 267
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 204 (76.9 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 60/261 (22%), Positives = 118/261 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK--TINSKKYGVDLVCFTSH 87
F ++G ++++ F S L T D ++L++V + C + G+ + F S
Sbjct: 313 FDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSA 372
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
+ ++ +S D + R+ ++ D + GH +V+S +SGS DRT+ L
Sbjct: 373 GSYLLAASN---DFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKL 429
Query: 148 WDQRAEKCQGLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG 204
WD R++ C ++ ++ D + V + F +R +D Y+ + I
Sbjct: 430 WDLRSKVCS--MKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDI-SYQN--YHIQKQLN 484
Query: 205 DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL-EASFSPEG 263
+ + ++D +L + + + ++D + T+N + S +FSP+G
Sbjct: 485 KLCRVTSLDLNHDRTELLTCSRDDLVKIIDLRTNAVRQTFNAQGFKCGSDFTRVTFSPDG 544
Query: 264 MFVISGSGDGSVYAWSVRSGK 284
FV +GS DG +Y W+V +GK
Sbjct: 545 SFVAAGSADGVLYLWNVLTGK 565
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 197 (74.4 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 75/308 (24%), Positives = 141/308 (45%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT-INSKKYGVDLVCFTS 86
M ++G + ++ F ++ ++ + S D SI L++ T C I S G L S
Sbjct: 60 MELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWN-TYGQCENYGILSGHKGAILDLQWS 118
Query: 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTV 145
+ I+S+ D +L + + +R + GH + + S+ + ++ +S S D T+
Sbjct: 119 RDSKTIFSASA--DMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTM 176
Query: 146 LLWDQRAEKCQGLLRVQGRP--AAAYDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSV 202
+WD R ++ L + P A A + G VF+ I ++D RK K ++S+
Sbjct: 177 GIWDPRQKEAIDYLETE-LPITAVAQSEAGNEVFSGGIDNAIHVWDIRK--KAI--VYSM 231
Query: 203 GGDISDANVVKFSNDGRLMLLTTMEGHIHVLD--SFRGTL--LSTYNVKPVSRNSTL-EA 257
G + ++ S D + +L + + + D F T + TY+ PV L A
Sbjct: 232 AGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRA 291
Query: 258 SFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGSSELS 316
S++P G + +GSGD SV W ++GK + +++TP + + V+ SS+ +
Sbjct: 292 SWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRN 351
Query: 317 FWIPDLSK 324
+ +L K
Sbjct: 352 LMLGELGK 359
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 201 (75.8 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 64/246 (26%), Positives = 106/246 (43%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+S FH S L T+S D +++L+D+ C+ T V C T H +S
Sbjct: 397 LSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAV-WSC-TWHSCGNFVASS 454
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
+ D++ ++ ++ + GH D V S+ + ++ S D+T+ +WD R C+
Sbjct: 455 S-LDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICE 513
Query: 157 GLL--RVQGRPAAAYDDQGLVFAVAFG-GYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L + A +D +G + A G +++D RK I S+ S N V
Sbjct: 514 QSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKL----LPIVSIDIGPSPGNEVN 569
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
F + GR++ + G IH+LD G + N FS +G + SG DG
Sbjct: 570 FDSSGRVLAQASGNGVIHLLDLKSGEIHKLMG----HENEAHTVVFSHDGEILFSGGSDG 625
Query: 274 SVYAWS 279
+V WS
Sbjct: 626 TVRTWS 631
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 63/288 (21%), Positives = 119/288 (41%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
FR + +S + LV+ +D ++ + L T + CF HP+
Sbjct: 348 FRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCF--HPS 405
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
++ +G D +++L L + F+GH V S + S + S SLD+T +WD
Sbjct: 406 GDKLATSSG-DTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWD 464
Query: 150 QRAEKCQGLLRVQGRPAAA---YDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
+E+C+ L + + + + + ++DAR G + S+ G +
Sbjct: 465 VNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDART---GICEQ-SLYGHM 520
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL-LSTYNVKPVSRNSTLEASFSPEGMF 265
N F G ++ G + D FR L + + ++ P N E +F G
Sbjct: 521 HSINDAIFDPRGHMIASCDACGVTKLWD-FRKLLPIVSIDIGPSPGN---EVNFDSSGRV 576
Query: 266 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWT-PGSLMFVTGS 312
+ SG+G ++ ++SG E+ M + E + ++ G ++F GS
Sbjct: 577 LAQASGNGVIHLLDLKSG-EIHKLMGHENEAHTVVFSHDGEILFSGGS 623
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 199 (75.1 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 62/262 (23%), Positives = 116/262 (44%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+S++ F +S + + D +++++ + + T G+ + ++ T+ S
Sbjct: 179 VSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSD 238
Query: 97 NGWDESLRLLSLHDNK-YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
D+++RL ++ K + F GHH+ V +++ + +SGS D V LWD R+ +
Sbjct: 239 ---DKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARV 295
Query: 156 QGLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVV 212
L P + D D L+ + A G +R++D G V D + V
Sbjct: 296 MKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDT---STGQCLRTLVHEDNPPVSSV 352
Query: 213 KFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-------- 264
KFS +G+ +L T++ + + D G L TY ++ +L +F G
Sbjct: 353 KFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHS-NKKYSLSGAFGVYGQSIPGRTPG 411
Query: 265 --FVISGSGDGSVYAWSVRSGK 284
F +SGS DG++ W V + K
Sbjct: 412 YAFAVSGSEDGAILCWDVVTKK 433
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 196 (74.1 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 70/282 (24%), Positives = 127/282 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC-LK-TINSKKYGVDLVCFTSH 87
F ++G ++++ F S L T D ++L++V C K +++ G+ + F S
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSA 377
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
+ ++ +S D + R+ ++ D + GH +V+S +SGS DRT+ L
Sbjct: 378 GSYLLAASN---DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKL 434
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS 207
WD R++ C + + V + F IR +D R E ++ + G I+
Sbjct: 435 WDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRS-ESIVREM-ELLGKIT 492
Query: 208 DANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNST-LEASFSPEGMF 265
++ N R LL+ + + + V+D + T++ S FSP+G +
Sbjct: 493 ALDL----NPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSY 548
Query: 266 VISGSGDGSVYAWSVRSGK-EVASWMSFDTEPPVIKWTP-GS 305
V +GS +GS+Y WSV +GK E + + W+P GS
Sbjct: 549 VAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGS 590
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 62/273 (22%), Positives = 113/273 (41%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
++L E + E S N I+S++F + SYL+ AS+D + R++ V T+
Sbjct: 346 VKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLT 405
Query: 74 SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR-YFKGHHDRVVSLSLCSS 132
V F ++ S D +L+L L ++ F G + +C+
Sbjct: 406 GHSGKVLSAKFLLDNARIVSGSH---DRTLKLWDLRSKVCIKTVFAGSSCNDI---VCTE 459
Query: 133 KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAA--YDDQGLVFAVAFGGYIRMFDAR 190
+ C +SG D+ + WD R+E + + G+ A ++ + + + +++ D R
Sbjct: 460 Q-CVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLR 518
Query: 191 KYE-KGPFDI--FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247
K F F G SD V FS DG + + EG +++ G + V
Sbjct: 519 TNAIKQTFSAPGFKCG---SDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKV---EKVL 572
Query: 248 PVSRNSTLEA-SFSPEGMFVISGSGDGSVYAWS 279
+S++ A ++SP G V+S W+
Sbjct: 573 SKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWA 605
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 196 (74.1 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 73/296 (24%), Positives = 133/296 (44%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC-LK-TINSKKYGVDLVCFTSH 87
F ++G ++++ F S L T D ++L++V C K +++ G+ + F S
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSA 377
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
+ ++ +S D + R+ ++ D + GH +V+S +SGS DRT+ L
Sbjct: 378 GSYLLAASN---DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKL 434
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS 207
WD R++ C + + V + F IR +D R E ++ + G I+
Sbjct: 435 WDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRS-ESIVREM-ELLGKIT 492
Query: 208 DANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNST-LEASFSPEGMF 265
++ N R LL+ + + + ++D + T++ S FSP+G +
Sbjct: 493 ALDL----NPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPDGGY 548
Query: 266 VISGSGDGSVYAWSVRSGK-EVASWMSFDTEPPVIKWTP-GS-LMFVTGSSELSFW 318
V +GS +GS+Y WSV SGK E + + W+P GS ++ V S+ W
Sbjct: 549 VAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSPSGSHVVSVDKGSKAVLW 604
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 58/253 (22%), Positives = 105/253 (41%)
Query: 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIY 93
N I+S++F + SYL+ AS+D + R++ V T+ V F ++
Sbjct: 366 NAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVS 425
Query: 94 SSKNGWDESLRLLSLHDNKYLR-YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
S D +L+L L ++ F G + +C+ + C +SG D+ + WD R+
Sbjct: 426 GSH---DRTLKLWDLRSKVCIKTVFAGSSCNDI---VCTEQ-CVMSGHFDKKIRFWDIRS 478
Query: 153 EKCQGLLRVQGRPAAA--YDDQGLVFAVAFGGYIRMFDAR-KYEKGPFDI--FSVGGDIS 207
E + + G+ A ++ + + + +++ D R + F F G S
Sbjct: 479 ESIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCG---S 535
Query: 208 DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA-SFSPEGMFV 266
D V FS DG + + EG +++ G + V S++ A ++SP G V
Sbjct: 536 DWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKV---EKVLSKQHGSSINAVAWSPSGSHV 592
Query: 267 ISGSGDGSVYAWS 279
+S WS
Sbjct: 593 VSVDKGSKAVLWS 605
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 196 (74.1 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 72/296 (24%), Positives = 134/296 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC-LK-TINSKKYGVDLVCFTSH 87
F ++G ++++ F S L T D ++L++V C K +++ G+ + F S
Sbjct: 334 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSA 393
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
+ ++ +S D + R+ ++ D + GH +V+S +SGS DRT+ L
Sbjct: 394 GSYLLAASN---DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKL 450
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS 207
WD R++ C + + V + F IR +D R E ++ + G I+
Sbjct: 451 WDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRS-ESIVREM-ELLGKIT 508
Query: 208 DANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNST-LEASFSPEGMF 265
++ N R LL+ + + + ++D + T++ S A FSP+G +
Sbjct: 509 ALDL----NPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRAVFSPDGSY 564
Query: 266 VISGSGDGSVYAWSVRSGK-EVASWMSFDTEPPVIKWTP-GS-LMFVTGSSELSFW 318
V +G+ +GS+Y W+V SGK E + + W+P GS ++ V S+ W
Sbjct: 565 VAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSPAGSHVVTVDKGSKAVLW 620
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 190 (71.9 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 56/256 (21%), Positives = 122/256 (47%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
+ IS + F + L +AS D+++ L+ T + + G+ + ++S
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSH--- 98
Query: 93 YSSKNGWDESLRLLSLHDN-KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151
Y+ D +LR+ + L+ +GH + V ++ + +SGS D T+ +W+ +
Sbjct: 99 YTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVK 158
Query: 152 AEKCQGLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD 208
KC +++ P ++ D L+ + + G +++DA++ G + ++ D S
Sbjct: 159 TGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE---GTC-LKTLIDDKSP 214
Query: 209 A-NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS-PEGMFV 266
A + KFS +G+ +L+ T++ + + + G L Y ++ + ++FS G ++
Sbjct: 215 AVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGH-TNKVFCITSAFSVTNGKYI 273
Query: 267 ISGSGDGSVYAWSVRS 282
+SGS D VY W +++
Sbjct: 274 VSGSEDNCVYLWDLQA 289
Score = 156 (60.0 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 43/136 (31%), Positives = 73/136 (53%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT-INSKKYGVDLVCFTSHPTTVIYSS 95
ISS+ F++ S +V+AS D S +++D TCLKT I+ K V F+ + ++ ++
Sbjct: 173 ISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVAT 232
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSL----SLCSSKDCFISGSLDRTVLLWDQR 151
D +L+L + K+L+ + GH ++V + S+ + K +SGS D V LWD +
Sbjct: 233 L---DSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGK-YIVSGSEDNCVYLWDLQ 288
Query: 152 AEKCQGLLRVQGRPAA 167
A L R++G A
Sbjct: 289 ARNI--LQRLEGHTDA 302
Score = 130 (50.8 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 36/141 (25%), Positives = 64/141 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA-TCLKTINSKKYGVDLVCFTSHP 88
+ ++ IS + + S Y +ASDD ++R++D + CLK + V V F P
Sbjct: 81 YEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP-P 139
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
+ +I S +DE++R+ + K +R K H + S+ +S S D + +W
Sbjct: 140 SNLIVSGS--FDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Query: 149 DQRAEKCQGLLRVQGRPAAAY 169
D + C L PA ++
Sbjct: 198 DAKEGTCLKTLIDDKSPAVSF 218
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 53/220 (24%), Positives = 97/220 (44%)
Query: 69 LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLS 128
LKT+ + V F++ + +S D+++ L S + + ++GH + L+
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASV---DKTMILWSATNYSLIHRYEGHSSGISDLA 92
Query: 129 LCSSKDCFISGSLDRTVLLWDQRAE-KCQGLLRVQGRPAAAYD---DQGLVFAVAFGGYI 184
S S S D T+ +WD R+ +C +LR + L+ + +F I
Sbjct: 93 WSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETI 152
Query: 185 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244
R+++ K K I + IS V F+ DG L++ + +G + D+ GT L T
Sbjct: 153 RIWEV-KTGKCVRMIKAHSMPISS---VHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Query: 245 NVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK 284
+ S + A FSP G F++ + D ++ + +GK
Sbjct: 209 -IDDKSPAVSF-AKFSPNGKFILVATLDSTLKLSNYATGK 246
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 194 (73.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 71/274 (25%), Positives = 125/274 (45%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGV-DLVCFTSHPTTV 91
+ G S+ F +S L T D +++++D + T +K++ + D+ + + +
Sbjct: 224 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVI 283
Query: 92 IYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRV--VSLSLCSSKDCFISGSLDRTVLLWD 149
+S N +L + + + GH D+V V +S SS+ +S + DRT+ LWD
Sbjct: 284 AATSSN----NLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHV-VSAAYDRTIKLWD 338
Query: 150 QRAEKCQG-LLRVQGRPAAAYDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS 207
C +L A GL VF+ G +R++D + G + V G S
Sbjct: 339 LHKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDI---QTGKL-LSEVAGHSS 394
Query: 208 DANVVKFSNDGRLMLLTTMEGHIH-VLDS----FRGTLLSTYNVKPVSRNSTLEASFSPE 262
V S +G +LT+ ++H V D+ GTL ++ N ++ N + + SP+
Sbjct: 395 AVTSVSLSRNGN-RILTSGRDNVHNVFDTRTLEICGTLRASGN--RLASNWS-RSCISPD 450
Query: 263 GMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP 296
+V +GS DGSV+ WS+ G + S + T P
Sbjct: 451 DDYVAAGSADGSVHVWSLSKGN-IVSILKEQTSP 483
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGV 79
+ S V + + ++ ++D K SS ++V+A+ D +I+L+D+ C T+
Sbjct: 296 VSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTS-NC 354
Query: 80 DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISG 139
+ +C + TV +G +LRL + K L GH V S+SL + + ++
Sbjct: 355 NAICLSIDGLTVFSGHMDG---NLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTS 411
Query: 140 SLDRTVLLWDQRAEKCQGLLRVQGRPAAA 168
D ++D R + G LR G A+
Sbjct: 412 GRDNVHNVFDTRTLEICGTLRASGNRLAS 440
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 69/286 (24%), Positives = 125/286 (43%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC-LK-TINSKKYGVDLVCFTSH 87
F ++G ++++ F S L T D ++L++ C K +++ G+ + F S
Sbjct: 318 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSA 377
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
++ +S D + R+ ++ D + GH +V+S +SGS DRT+ L
Sbjct: 378 GAYLLAASN---DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKL 434
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS 207
WD R++ C + + V + F IR +D R E ++ + G I+
Sbjct: 435 WDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRS-ESVVREM-ELLGKIT 492
Query: 208 DANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNST-LEASFSPEGMF 265
++ N R LL+ + + + V+D + T++ S FSP+G +
Sbjct: 493 ALDL----NPERTELLSCSRDDLLKVIDLRTNAVKQTFSAPGFKCGSDWTRVVFSPDGSY 548
Query: 266 VISGSGDGSVYAWSVRSGK-EVASWMSFDTEPPVIKWTPGSLMFVT 310
V +GS +GS+Y WSV +GK E + + W P L V+
Sbjct: 549 VAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVVS 594
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 61/273 (22%), Positives = 113/273 (41%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
++L E E S N I+S++F + +YL+ AS+D + R++ V T+
Sbjct: 346 VKLWEAFGDKCEFKGSLSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLT 405
Query: 74 SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR-YFKGHHDRVVSLSLCSS 132
V F ++ S D +L+L L ++ F G + +C+
Sbjct: 406 GHSGKVLSAKFLLDNARIVSGSH---DRTLKLWDLRSKVCIKTVFAGSSCNDI---VCTE 459
Query: 133 KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAA--YDDQGLVFAVAFGGYIRMFDAR 190
+ C +SG D+ + WD R+E + + G+ A ++ + + + +++ D R
Sbjct: 460 Q-CVMSGHFDKKIRFWDIRSESVVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLR 518
Query: 191 KYE-KGPFDI--FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247
K F F G SD V FS DG + + EG ++V G + V
Sbjct: 519 TNAVKQTFSAPGFKCG---SDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKV---EKVL 572
Query: 248 PVSRNSTLEA-SFSPEGMFVISGSGDGSVYAWS 279
+S++ A +++P G+ V+S W+
Sbjct: 573 SKQHSSSINAVAWAPSGLHVVSVDKGSRAVLWA 605
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 187 (70.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 57/255 (22%), Positives = 116/255 (45%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
I+ + ++++ Y++ A ++ +RL++V + C+ +G +++ + ++S
Sbjct: 17 INVVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAG--HGHEILDLDLVYDSTKFASC 74
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
G D+ +++ ++ K R GH ++ ++ SGS D V LWD R+
Sbjct: 75 GG-DKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFS 133
Query: 157 GL-LRVQGRPAAAYDD--QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
+ + + + + D + L+ + G +R +D RK D FS VK
Sbjct: 134 PIQVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGTLSS-DYFS-----HPITSVK 187
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
S L++++ IH+LD G +L +Y + + + +SF+ V SGS DG
Sbjct: 188 TSKSASFSLISSLNSSIHLLDQETGKILKSY-IGLKNMEYRVRSSFNQSETIVFSGSEDG 246
Query: 274 SVYAWSVRSGKEVAS 288
VY W + + ++ S
Sbjct: 247 KVYLWDLENETQITS 261
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 186 (70.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 64/290 (22%), Positives = 119/290 (41%)
Query: 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTT 90
+ + G + + F+ +Y +T D +IRL++ +KT S V V TS
Sbjct: 15 KGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAK 74
Query: 91 VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQ 150
+ S G D + + + +R F+GH V ++ S +S DR++ +WD
Sbjct: 75 --FCSCGG-DRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDC 131
Query: 151 RAEKCQGLLRVQ---GRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS 207
R+ + + + + + + + G +R FD R +G ++S
Sbjct: 132 RSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMR-----------IGREMS 180
Query: 208 D-----ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 262
D N + SNDG +L ++ + +LD G LL Y +S++ + +
Sbjct: 181 DNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH-ISKSFKTDCCLTNS 239
Query: 263 GMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS 312
VI GS DG V+ W + K ++ + + D + + P +T S
Sbjct: 240 DAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSS 289
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 192 (72.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 72/268 (26%), Positives = 118/268 (44%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI--NSKKYGVDL----VCFTS 86
+N + ++F YL T + S ++YDV + S+K G DL VCF+
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCN-RSAQIYDVDTGKKVHAFVDESEKDG-DLYIRSVCFSP 337
Query: 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
Y + D+++++ +H K F GH + SL S +SGS D+
Sbjct: 338 DGN---YLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAK 394
Query: 147 LWDQRAEKCQGLLRVQ------GRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDI 199
+WD KC L + G + A G LV A + +R++DA + G F +
Sbjct: 395 IWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDA---QTGYF-L 450
Query: 200 FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD----SFRGTLLSTYNVKPVSRNSTL 255
G + V FS DG+ + +++ + + D R +T+N ++ L
Sbjct: 451 ERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGH---KDFVL 507
Query: 256 EASFSPEGMFVISGSGDGSVYAWSVRSG 283
+FSP+G ++ISGS D SV W R+G
Sbjct: 508 SVAFSPDGSWLISGSKDRSVQFWDPRNG 535
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSK----K 76
+ + ++ +F + I S+D+ ++V+ S D+ +++D+ C T+ ++ K
Sbjct: 356 IHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPK 415
Query: 77 YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF 136
GV V + V S D +RL +L ++GH D V S++
Sbjct: 416 NGVTSVAMSPDGRLVAAGSL---DNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSL 472
Query: 137 ISGSLDRTVLLWDQRAEKCQGLLR 160
SGSLD+++ LWD + + R
Sbjct: 473 ASGSLDKSLKLWDLSGSRSRSRCR 496
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 64/260 (24%), Positives = 110/260 (42%)
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSL---SLCSSKD--C 135
+VC + Y + G + S ++ + K + F ++ L S+C S D
Sbjct: 283 VVCCVNFSNDGKYLA-TGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNY 341
Query: 136 FISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAA--YDDQGLVFAVAFGG--YIRMFDARK 191
+G+ D+TV +WD +K Q + Y G F V+ G +++D
Sbjct: 342 LATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGR-FIVSGSGDKKAKIWDI-- 398
Query: 192 YEKGPFDIFSVGGD-ISDAN---VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247
EKG F++G + + N V S DGRL+ +++ + + D+ G L Y
Sbjct: 399 -EKGKC-AFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGH 456
Query: 248 PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM--SFDTEPPVI---KWT 302
+S +FSP+G + SGS D S+ W + SG S +F+ + ++
Sbjct: 457 ---LDSVYSVAFSPDGKSLASGSLDKSLKLWDL-SGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 303 PGSLMFVTGSSELS--FWIP 320
P ++GS + S FW P
Sbjct: 513 PDGSWLISGSKDRSVQFWDP 532
>WB|WBGene00019427 [details] [associations]
symbol:atg-16.2 species:6239 "Caenorhabditis elegans"
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00700000104505
HOGENOM:HOG000016928 InterPro:IPR020472 PRINTS:PR00320
EMBL:FO081583 PIR:T34332 RefSeq:NP_495299.2
ProteinModelPortal:Q09406 SMR:Q09406 DIP:DIP-27464N
MINT:MINT-1077081 PaxDb:Q09406 EnsemblMetazoa:K06A1.5.1
EnsemblMetazoa:K06A1.5.2 GeneID:174067 KEGG:cel:CELE_K06A1.5
CTD:174067 WormBase:K06A1.5 InParanoid:Q09406 OMA:IWNTKTT
NextBio:882359 GO:GO:0006914 GO:GO:0071688 Uniprot:Q09406
Length = 534
Score = 188 (71.2 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 73/298 (24%), Positives = 140/298 (46%)
Query: 19 EILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDV----TAATCLKTINS 74
++L S EV ++G + +++ ++ TA D ++++ V T A+ + T++
Sbjct: 231 DVLPS-EVKFKLSTHDGEVHDVEWMSDDTF-ATAGSDSKVQIWRVSPNKTDASKVSTLSG 288
Query: 75 KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 134
V+ + + S + SS D++ RL ++ + L F GH D+V S L S +
Sbjct: 289 CLGPVNRLDYDSQRHVCLASSN---DKTCRLWNIDSQRLLSTFSGHTDKVSSARLFQSHN 345
Query: 135 CFISGSLDRTVLLWDQRAEKC-QGLL---RVQGRPAAAYDDQGLVFAVAFGGYIRMFDAR 190
ISGS DRT+ WD + +C + L V A Q + F +R +DAR
Sbjct: 346 V-ISGSADRTIKNWDISSIRCLKSYLVGSTVFDIVAKCGVSQSSFISSHFDKKVRFWDAR 404
Query: 191 KYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP-- 248
+ + + +G +S ++ S DG +L ++ + + ++D ++ Y+ +
Sbjct: 405 SSD-ATYSV-ELGQKVSSLDI---SMDGLQVLASSRDDTLSLIDVRNYGIIHLYSAEQYK 459
Query: 249 VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPV-IKWTP 303
S +ST A FS G +V++GS + SV+ W+ ++ K +V D+ + + W P
Sbjct: 460 TSCDST-RAIFSSTGEYVLAGSSNSSVFIWNTKTTKLEKVVKTARSDSAQIMSLAWNP 516
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 185 (70.2 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 73/299 (24%), Positives = 128/299 (42%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC-LK-TINSKKYGVDLVCFTSH 87
F ++G ++++ F S L T D ++L++ C K +++ G+ + F S
Sbjct: 299 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSA 358
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
++ +S D + R+ ++ D + GH +V+S +SGS DRT+ L
Sbjct: 359 GAYLLAASN---DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKL 415
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDDQGL--VFAVAFGGYIRMFDARKYEKGPFDIFSVGGD 205
WD R++ C+ + + A+ G+ VFA + I + + G FD D
Sbjct: 416 WDLRSKVCEEMQSLCVLMTFAFL-LGIKTVFAGSSCNDI-VCTEQCVMSGHFDKKIRFWD 473
Query: 206 ISDANVVK-FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS------ 258
I +VV+ G++ L +L R LL +++ + + A
Sbjct: 474 IRSESVVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRTNAIKQSFSAPGFKCGS 533
Query: 259 ------FSPEGMFVISGSGDGSVYAWSVRSGK-EVASWMSFDTEPPVIKWTPGSLMFVT 310
FSP+G +V +GS DGS+Y WSV +GK E + + W P L V+
Sbjct: 534 DWTRVVFSPDGSYVAAGSADGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVVS 592
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 176 (67.0 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 72/312 (23%), Positives = 132/312 (42%)
Query: 21 LQSMEVG-MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGV 79
L S++ M ++G I F+ + Y+ + S D SI L+ I S G
Sbjct: 46 LSSLQAPLMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILSGHRGA 105
Query: 80 DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFIS 138
L S + +I+S+ D L L + +R + GH + + SL + ++ S
Sbjct: 106 ILDLQWSRDSDIIFSASA--DMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFS 163
Query: 139 GSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGL-VFAVAFGGYIRMFDARKYEKGP 196
GS D T+ +WD R + + A A + G +++ I+++D RK K
Sbjct: 164 GSDDGTIGIWDPRKKHAADYIESDFPVTAVAISEAGNEIYSGGIDNDIKVWDVRK--KAV 221
Query: 197 FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD--SFRGTL--LSTYNVKPVSRN 252
++++ G +K S D + +L M+ D F T + T++ P+
Sbjct: 222 --VYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIE 279
Query: 253 STL-EASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVT 310
L + EG V G+ DG+V WS +GK ++++PG+ + ++
Sbjct: 280 KNLVRGGWDKEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILS 339
Query: 311 GSSELSFWIPDL 322
GSS+ + + +L
Sbjct: 340 GSSDKTLLVGEL 351
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 179 (68.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 71/279 (25%), Positives = 122/279 (43%)
Query: 45 SSSYLVTA-SDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103
S YL+ + S D ++R+++V T L T++ + + C IYSS +D+++
Sbjct: 237 SGPYLLASGSKDNTVRIWNVKLRTLLFTLSG--HTAPITCVRWGGQNWIYSSS--YDKTI 292
Query: 104 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL----LWDQRA---EKCQ 156
R+ D K L KGH RV LSL S++ SG+ D T D+R E+ +
Sbjct: 293 RIWDAKDGKCLHILKGHAARVNHLSL-STEHVLRSGAYDHTDFKPKSFSDERRKAKERYE 351
Query: 157 GLLRVQG-RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFS 215
L+ G R +A DD L+ ++D +K K P I + G N FS
Sbjct: 352 ACLKQSGERLVSASDDLQLI----------LWDPQKSTK-P--ITKMHGHQKVVNHASFS 398
Query: 216 NDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSV 275
DGR + + + + + D G L+T + + ++S + ++S S D ++
Sbjct: 399 PDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAA---VYQCAWSTDSRLLVSSSQDTTL 455
Query: 276 YAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
W VRS K + + + W+P +G ++
Sbjct: 456 KVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGAD 494
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 54/240 (22%), Positives = 109/240 (45%)
Query: 47 SYLVTASDDESIRLYDVTAATCLKTINSKKYGVD-LVCFTSHPTTVIYSSKNGWDES-LR 104
+++ ++S D++IR++D CL + V+ L T H V+ S +D + +
Sbjct: 281 NWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEH---VLRSG--AYDHTDFK 335
Query: 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR 164
S D + R K ++ + S + +S S D ++LWD + + + + ++ G
Sbjct: 336 PKSFSDER--RKAKERYEACLK----QSGERLVSASDDLQLILWDPQ-KSTKPITKMHGH 388
Query: 165 PA----AAYDDQGLVFAVA-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR 219
A++ G A A F +R++D + G F + ++ G ++ +S D R
Sbjct: 389 QKVVNHASFSPDGRCIATASFDSSVRLWDGKT---GKF-LATLRGHVAAVYQCAWSTDSR 444
Query: 220 LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWS 279
L++ ++ + + V D R + +++ P + +SP+G V SG D +V WS
Sbjct: 445 LLVSSSQDTTLKVWD-VRSKKMK-FDL-PGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 90 (36.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 42/174 (24%), Positives = 70/174 (40%)
Query: 29 SFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87
S ++G I S F S SS LVT S D + RL+D T + T+ V V +
Sbjct: 129 SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWA-- 186
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLC---------SSKDCFIS 138
P I ++ D ++R + H + + ++LC S S
Sbjct: 187 PDASIIAT-GSMDNTIRFWDPKKGSPIGDALRRHTKPI-MALCWQPLHLAPDSGPYLLAS 244
Query: 139 GSLDRTVLLWDQRAEKCQGLLRVQGRPAAA--YDDQGLVFAVAFGGYIRMFDAR 190
GS D TV +W+ + L P + Q +++ ++ IR++DA+
Sbjct: 245 GSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAK 298
Score = 81 (33.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 257 ASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE-- 314
ASFSP+G + + S D SV W ++GK +A+ W+ S + V+ S +
Sbjct: 395 ASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTT 454
Query: 315 LSFW 318
L W
Sbjct: 455 LKVW 458
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 180 (68.4 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 63/292 (21%), Positives = 125/292 (42%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDV--TAATCLKTINSKKYGVDLVCFT 85
M F + ++ + + T D ++L+D+ + ++ G++ V F
Sbjct: 312 MKFEAHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSVDFD 371
Query: 86 SHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTV 145
S ++ +S D R+ ++ DN+ GH +V++ ++GS DRT+
Sbjct: 372 STGAYILGTSN---DYGARVWTVMDNRLRHTLTGHSGKVMAAKYVQEPIKVVTGSHDRTL 428
Query: 146 LLWDQRAEKCQGLLRVQGRPAAAYD---DQGLVFAVAFGGY---IRMFDARKYEKGPFDI 199
+WD R+ C + + ++ D L + G Y IR +D R EK D+
Sbjct: 429 KIWDLRSIAC---IETKFAGSSCNDLVTTDSLGSTIISGHYDKKIRFWDIRT-EKQADDV 484
Query: 200 FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL-EAS 258
+ I+ ++ S D ++ + + I +LD + ++ST+ + + AS
Sbjct: 485 L-MPAKITSLDL---SKDCNYLICSVRDDTIKLLDLRKNQVISTFTNEHFKISCDFARAS 540
Query: 259 FSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVT 310
F+ G+ + GS DG++Y W+V E A+ T + W+P + M +
Sbjct: 541 FNSSGLKIACGSADGAIYIWNVNGFLE-ATLKGHSTAVNAVSWSPNNNMLAS 591
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 179 (68.1 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 69/309 (22%), Positives = 127/309 (41%)
Query: 17 SEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKK 76
SE +L S + + +N I M F+ + L T D+ ++++DV + T+
Sbjct: 308 SEAMLPS-KAKKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGAS 366
Query: 77 YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF 136
+ V F+ + +++ +S D S RL + + GH +V + +S
Sbjct: 367 QSIVSVSFSPNDESILGTSN---DNSARLWNTELGRSRHTLTGHIGKVYTGKFINSNRV- 422
Query: 137 ISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFAVAFGGY-IRMFDARKYE 193
++GS DRT+ LWD + C + G A + +R +D+ E
Sbjct: 423 VTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGE 482
Query: 194 KGPFDIFSVGGDISDANVVKFSND--GRLMLLTTMEGH-IHVLDSFRGTLLSTYNVKPVS 250
P + S I + + +N +LT H + ++D + T+ P
Sbjct: 483 --PTQVLS---SIHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIRTFK-DPEY 536
Query: 251 RNST--LEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVI---KWTPGS 305
RN +AS+SP+G ++ SGS DGS+ W +GK V + W+P +
Sbjct: 537 RNGLNWTKASWSPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCCCSWSPLA 596
Query: 306 LMFVTGSSE 314
+F++ +
Sbjct: 597 NIFISADKD 605
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 173 (66.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 64/281 (22%), Positives = 122/281 (43%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
++++ +KS S +T S D + +L+D + L T+ + V + F + I +
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKI--AT 152
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD-QRAEKC 155
+D++ +L S+ K F+GH +V LS +GS+D T LWD Q E+
Sbjct: 153 GSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEV 212
Query: 156 QGLLRVQGRPAA-AYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L + +++ G + +F + ++DA K I G ++ +
Sbjct: 213 YTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILI----GHCAEISSAS 268
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
F+ D L+L +M+ + D+ G ++T + L++ F G + + S DG
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHD---DEILDSCFDYTGKLIATASADG 325
Query: 274 SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
+ +S + K +A + E I + P +TGSS+
Sbjct: 326 TARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSD 366
Score = 162 (62.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 49/239 (20%), Positives = 108/239 (45%)
Query: 49 LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108
+ T S D++ +L+ V C T + ++VC + +P + + ++ D + +L +
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRG--HTAEIVCLSFNPQSTLVAT-GSMDTTAKLWDI 206
Query: 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPA 166
+ + + +GH ++SLS +S D I+GS D TV++WD + +L +
Sbjct: 207 QNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISS 266
Query: 167 AAYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT 225
A+++ D L+ + +++DA K + +I D+ F G+L+ +
Sbjct: 267 ASFNWDCSLILTGSMDKTCKLWDATN-GKCVATLTGHDDEILDSC---FDYTGKLIATAS 322
Query: 226 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK 284
+G + + ++ + SF+P+G +++GS D + W ++G+
Sbjct: 323 ADGTARIFSAATRKCIAKLEGH---EGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQ 378
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 60/266 (22%), Positives = 110/266 (41%)
Query: 21 LQSMEVGM---SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY 77
L S+E G +FR + I + F+ S+ + T S D + +L+D+ + T+
Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSA 220
Query: 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDC-- 135
+ + F + +I S +D ++ + + + GH + S S + DC
Sbjct: 221 EIISLSFNTSGDRIITGS---FDHTVVVWDADTGRKVNILIGHCAEISSASF--NWDCSL 275
Query: 136 FISGSLDRTVLLWDQRAEKCQGLLRVQGRPA--AAYDDQGLVFAVAFG-GYIRMFDARKY 192
++GS+D+T LWD KC L + +D G + A A G R+F A
Sbjct: 276 ILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR 335
Query: 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252
+ I + G + + + F+ G +L + + + D+ G L V +
Sbjct: 336 KC----IAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQ---VLEGHTD 388
Query: 253 STLEASFSPEGMFVISGSGDGSVYAW 278
+F+ +G VI+GS D + W
Sbjct: 389 EIFSCAFNYKGNIVITGSKDNTCRIW 414
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 156 (60.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 67/297 (22%), Positives = 124/297 (41%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN------SKKYGVDLVCFTSHPTT 90
+ + F + YL T + ++ ++DV L T++ S+ V + F+
Sbjct: 316 VCCVKFSNNGKYLATGCN-QAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKY 374
Query: 91 VIYSSKNGWDESLRLLSLHDNKYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
++ ++ D ++L L K +RY F GH + SL + +SGS DRT LWD
Sbjct: 375 LVTGTE---DRQIKLWDLSTQK-VRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD 430
Query: 150 QRAEKCQGLLRVQ-GRPAAAYDDQGLVFAV-AFGGYIRMFDARKYEKGPFDIFSVGGDIS 207
+C L ++ G A A AV + IR++ G + + G
Sbjct: 431 VETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSV----SGTL-VERLEGHKE 485
Query: 208 DANVVKFSNDGRLMLLTTMEGHIHV--LDSFRGTLLSTYNVKPVSRNS-------TLEAS 258
+ FS D ++L +++ I V L + R LS + + + + L +
Sbjct: 486 SVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVA 545
Query: 259 FSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSEL 315
SP+ + +SGS D S+ W +++G+ + + ++P F +GS +L
Sbjct: 546 VSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDL 602
Score = 151 (58.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 42/162 (25%), Positives = 78/162 (48%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L + +V F + I S+DF + ++V+ S D + RL+DV C+ + + GV
Sbjct: 389 LSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIEN-GVT 447
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
+ + + + S D+ +R+ S+ R +GH + V S++ +SGS
Sbjct: 448 AIAISPNDQFIAVGSL---DQIIRVWSVSGTLVER-LEGHKESVYSIAFSPDSSILLSGS 503
Query: 141 LDRTVLLWDQRAEKCQGL--LRVQGRPAAAYDDQ-GLVFAVA 179
LD+T+ +W+ +A + GL ++ +G A Y V +VA
Sbjct: 504 LDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVA 545
Score = 68 (29.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSV 280
+NS + FSP+G SGSGD WS+
Sbjct: 580 KNSVISVCFSPDGRQFASGSGDLRARIWSI 609
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 170 (64.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 63/289 (21%), Positives = 127/289 (43%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
++++ +K+ S +T S D + +++D + L T+ + V + F + I +
Sbjct: 95 LTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI--AT 152
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD-QRAEKC 155
+D++ +L S K F+GH +V LS +GS+D T LWD Q E+
Sbjct: 153 GSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEV 212
Query: 156 QGLL-RVQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L + + ++D G + +F + ++DA K + ++ G ++ +
Sbjct: 213 VTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRK----VHTLIGHCAEISSAL 268
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
FS D L+L +M+ + D+ G ++T + L++ F G + + S DG
Sbjct: 269 FSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHD---DEILDSCFDYTGKLIATASADG 325
Query: 274 SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
+ ++ + K + + E I + P +TGSS+ + I D+
Sbjct: 326 TARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDV 374
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 52/239 (21%), Positives = 102/239 (42%)
Query: 49 LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108
+ T S D++ +L+ C T + ++VC + +P + + ++ D + +L +
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRG--HTAEIVCLSFNPQSTVVAT-GSMDTTAKLWDI 206
Query: 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD-QRAEKCQGLL-RVQGRPA 166
+ + GH ++SLS +S D I+GS D TV++WD K L+ +
Sbjct: 207 QSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISS 266
Query: 167 AAYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT 225
A + D L+ + ++DA K + +I D+ F G+L+ +
Sbjct: 267 ALFSWDCSLILTGSMDKTCMLWDATS-GKCVATLTGHDDEILDSC---FDYTGKLIATAS 322
Query: 226 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK 284
+G V + T + SF+P+G +++GS D + W V++G+
Sbjct: 323 ADGTARV---YNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQ 378
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 60/266 (22%), Positives = 111/266 (41%)
Query: 21 LQSMEVGM---SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY 77
L S E G +FR + I + F+ S+ + T S D + +L+D+ + + T+
Sbjct: 161 LWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLA 220
Query: 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDC-- 135
+ + F + +I S +D ++ + + + GH + S S DC
Sbjct: 221 EIISLSFDTSGDRIITGS---FDHTVVVWDASTGRKVHTLIGHCAEISSALF--SWDCSL 275
Query: 136 FISGSLDRTVLLWDQRAEKCQGLLRVQGRPA--AAYDDQGLVFAVAFG-GYIRMFDARKY 192
++GS+D+T +LWD + KC L + +D G + A A G R+++A
Sbjct: 276 ILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTR 335
Query: 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252
+ I + G + + + F+ G +L + + + D G L V +
Sbjct: 336 KC----ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQ---VLEGHTD 388
Query: 253 STLEASFSPEGMFVISGSGDGSVYAW 278
+F+ +G VI+GS D S W
Sbjct: 389 EIFSCAFNYKGNIVITGSKDNSCRIW 414
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 170 (64.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 61/281 (21%), Positives = 124/281 (44%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
++++ +KS S +T S D + +L+D + L T+ + V + F + I +
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI--AT 152
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD-QRAEKC 155
+D++ +L S+ K F+GH +V LS +GS+D T LWD Q E+
Sbjct: 153 GSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEV 212
Query: 156 QGLLRVQGRPAA-AYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L + +++ G + +F + +++A K ++++ G ++ +
Sbjct: 213 FTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRK----VYTLIGHCAEISSAV 268
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
F+ D L+L +M+ + D+ G ++T + L++ F G + + S DG
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHD---DEILDSCFDYTGKLIATASADG 325
Query: 274 SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
+ +S + + V + E I + P +TGSS+
Sbjct: 326 TARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSD 366
Score = 142 (55.0 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 49/239 (20%), Positives = 102/239 (42%)
Query: 49 LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108
+ T S D++ +L+ V C T + ++VC + +P + + ++ D + +L +
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRG--HTAEIVCLSFNPQSTLVAT-GSMDTTAKLWDI 206
Query: 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD-QRAEKCQGLL-RVQGRPA 166
+ + GH ++SLS +S + I+GS D TV +W+ K L+ +
Sbjct: 207 QSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISS 266
Query: 167 AAYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT 225
A ++ D L+ + +++DA K + +I D+ F G+L+ +
Sbjct: 267 AVFNWDCSLILTGSMDKTCKLWDAVN-GKCVATLTGHDDEILDSC---FDYTGKLIATAS 322
Query: 226 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK 284
+G + F + SF+P+G +++GS D + W ++G+
Sbjct: 323 ADGTARI---FSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQ 378
Score = 142 (55.0 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 58/266 (21%), Positives = 110/266 (41%)
Query: 21 LQSMEVGM---SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY 77
L S+E G +FR + I + F+ S+ + T S D + +L+D+ + + T+
Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSA 220
Query: 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDC-- 135
+ + F + +I S +D ++ + + + GH + S + DC
Sbjct: 221 EIISLSFNTSGNRIITGS---FDHTVTVWEADTGRKVYTLIGHCAEISSAVF--NWDCSL 275
Query: 136 FISGSLDRTVLLWDQRAEKCQGLLRVQGRPA--AAYDDQGLVFAVAFG-GYIRMFDARKY 192
++GS+D+T LWD KC L + +D G + A A G R+F A
Sbjct: 276 ILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR 335
Query: 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252
E + + G + + + F+ G +L + + + D+ G L V +
Sbjct: 336 EC----VTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQ---VLEGHTD 388
Query: 253 STLEASFSPEGMFVISGSGDGSVYAW 278
+F+ +G +I+GS D + W
Sbjct: 389 EIFSCAFNYKGDIIITGSKDNTCRIW 414
>WB|WBGene00017178 [details] [associations]
symbol:atg-16.1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:FO081068 PIR:T15958
RefSeq:NP_508768.1 ProteinModelPortal:Q19124 SMR:Q19124
PaxDb:Q19124 EnsemblMetazoa:F02E8.5 GeneID:180717
KEGG:cel:CELE_F02E8.5 CTD:180717 WormBase:F02E8.5 eggNOG:COG2319
GeneTree:ENSGT00700000104505 HOGENOM:HOG000016928 InParanoid:Q19124
OMA:STRDDTI NextBio:910606 InterPro:IPR020472 PRINTS:PR00320
Uniprot:Q19124
Length = 578
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 61/296 (20%), Positives = 129/296 (43%)
Query: 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAA---TCLKTINSKKYGVDLVCFTSHPTTV 91
G ++ + + ++ T D +I+++ V T + T+ + +
Sbjct: 293 GEVNDVHWLDGETF-ATGGSDRNIKIWKVDGHGGYTRIGTLAGSNAAFTRIDYERDRKHF 351
Query: 92 IYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151
I SS D+++R+ +L +++ L GH D+V + S +SGS DR + +WD +
Sbjct: 352 IASSN---DKNVRIWNLDNSRLLSTLSGHSDQVTCVKFYQSHSA-VSGSADRVIKIWDIQ 407
Query: 152 AEKCQGLLRVQGRPAAAYDDQGL---VFAVA-FGGYIRMFDARKYEKGPFDIFSVGGDIS 207
++C L + + G +FA F +R +D R + P +GG I+
Sbjct: 408 NQRCSRSLFPASKVLDVATNMGASPSLFASGHFDKKLRFYDGRSTD--PVRTVDMGGRIT 465
Query: 208 DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FV 266
+V G +L++T + I ++D + Y+ + +S L G +V
Sbjct: 466 SLDVTM---SGCELLVSTRDDTISLIDLRTFQTVHCYSAENYRTSSDLSRVVLSSGNEYV 522
Query: 267 ISGSGDGSVYAWSVRSGKEVASWMSFDTEPPV--IKWTPGSLMFVTGSSE--LSFW 318
+GS +GS++ W+ R+ ++ + ++E + + W P ++ S + ++ W
Sbjct: 523 AAGSSNGSIFVWN-RNSTKLEKQLCSNSENAIFSLSWNPTGYGLLSSSKQKFVTLW 577
>DICTYBASE|DDB_G0282793 [details] [associations]
symbol:wdr61 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000047
GenomeReviews:CM000152_GR eggNOG:COG2319 HSSP:P16649
RefSeq:XP_640180.1 ProteinModelPortal:Q54S59
EnsemblProtists:DDB0267163 GeneID:8623719 KEGG:ddi:DDB_G0282793
OMA:CIWDIKT ProtClustDB:CLSZ2430473 Uniprot:Q54S59
Length = 299
Score = 161 (61.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 53/248 (21%), Positives = 115/248 (46%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
++S+D + YL T D ++RL+D++ T KTI+S G + F + ++ S+
Sbjct: 59 VTSLDIDIGARYLATGGMDGTVRLFDLSTNTLHKTIDSGPLGCLKIGFLNSANNLVSVSE 118
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
+G ++ + S+ + LR + +V+++++ + + LD TVL +D + +
Sbjct: 119 SG---NISIYSVETGEKLRSISNTNKQVLTMAISPNNEQIAVAGLDGTVLCYDVESGRRV 175
Query: 157 GLLRVQGRPAAAY---DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
++ G P + D +F A IR+ D P+ +G ++V
Sbjct: 176 SEIKAHGVPIRSLCFSSDSKTIFTGAEDSQIRLHDPNS--SNPYIASLLGHSSFIFSLVA 233
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
SN L +++ + + D L S++ + T + +FSP+ ++S S D
Sbjct: 234 SSNGDLLASSGSIDRKVCIWDIKTRKLDSSFTAHA---DQTWDLAFSPDSTKLVSVSDDC 290
Query: 274 SVYAWSVR 281
S+++++++
Sbjct: 291 SIHSYALK 298
Score = 132 (51.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 44/161 (27%), Positives = 75/161 (46%)
Query: 2 VGSQSEREDKVSLELSEEI-LQSMEVGMSFRDY---NGRISSMDFHKSSSYLVTASDDES 57
+G + + VS+ S I + S+E G R N ++ +M ++ + A D +
Sbjct: 104 IGFLNSANNLVSVSESGNISIYSVETGEKLRSISNTNKQVLTMAISPNNEQIAVAGLDGT 163
Query: 58 IRLYDVTAATCLKTINSKKYGVDL--VCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYL 114
+ YDV + + I K +GV + +CF+S T+ ++ D +RL + N Y+
Sbjct: 164 VLCYDVESGRRVSEI--KAHGVPIRSLCFSSDSKTIFTGAE---DSQIRLHDPNSSNPYI 218
Query: 115 RYFKGHHDRVVSLSLCSSKDCFIS-GSLDRTVLLWDQRAEK 154
GH + SL S+ D S GS+DR V +WD + K
Sbjct: 219 ASLLGHSSFIFSLVASSNGDLLASSGSIDRKVCIWDIKTRK 259
>WB|WBGene00018014 [details] [associations]
symbol:F33G12.2 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0019915 HSSP:P16649
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 KO:K13124
OMA:CKQGAVR EMBL:FO080686 RefSeq:NP_494926.1
ProteinModelPortal:Q19986 SMR:Q19986 IntAct:Q19986 STRING:Q19986
EnsemblMetazoa:F33G12.2 GeneID:173867 KEGG:cel:CELE_F33G12.2
UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2 InParanoid:Q19986
NextBio:881457 Uniprot:Q19986
Length = 305
Score = 160 (61.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 61/250 (24%), Positives = 111/250 (44%)
Query: 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYS 94
G + ++ ++ +Y VT D++++L++ ++ LKT + V L +S + I
Sbjct: 17 GAVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEV-LDAASSSDNSQI-- 73
Query: 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD--QRA 152
+ G D + + + K LR ++ H +V +++ SGS+D T+ +D R+
Sbjct: 74 AAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRS 133
Query: 153 EKCQGLLRVQGRPAAAYDDQG--LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDAN 210
EK + + D G +V A G Y R++ R G + +G + N
Sbjct: 134 EKPIQIFNESTDGILSIDVNGHEIVAGSADGNY-RVYSIRD---GNMTVDYMGDSV---N 186
Query: 211 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270
V F+ D +L M G + ++D G LL++Y + L+ V SGS
Sbjct: 187 SVSFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQ-NTEYKLDCRVLQSIEHVASGS 245
Query: 271 GDGSVYAWSV 280
DG VY +S+
Sbjct: 246 EDGFVYVYSL 255
>UNIPROTKB|Q19986 [details] [associations]
symbol:F33G12.2 "Protein F33G12.2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0019915 HSSP:P16649 GeneTree:ENSGT00700000104496
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR EMBL:FO080686
RefSeq:NP_494926.1 ProteinModelPortal:Q19986 SMR:Q19986
IntAct:Q19986 STRING:Q19986 EnsemblMetazoa:F33G12.2 GeneID:173867
KEGG:cel:CELE_F33G12.2 UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2
InParanoid:Q19986 NextBio:881457 Uniprot:Q19986
Length = 305
Score = 160 (61.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 61/250 (24%), Positives = 111/250 (44%)
Query: 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYS 94
G + ++ ++ +Y VT D++++L++ ++ LKT + V L +S + I
Sbjct: 17 GAVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEV-LDAASSSDNSQI-- 73
Query: 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD--QRA 152
+ G D + + + K LR ++ H +V +++ SGS+D T+ +D R+
Sbjct: 74 AAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRS 133
Query: 153 EKCQGLLRVQGRPAAAYDDQG--LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDAN 210
EK + + D G +V A G Y R++ R G + +G + N
Sbjct: 134 EKPIQIFNESTDGILSIDVNGHEIVAGSADGNY-RVYSIRD---GNMTVDYMGDSV---N 186
Query: 211 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270
V F+ D +L M G + ++D G LL++Y + L+ V SGS
Sbjct: 187 SVSFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQ-NTEYKLDCRVLQSIEHVASGS 245
Query: 271 GDGSVYAWSV 280
DG VY +S+
Sbjct: 246 EDGFVYVYSL 255
>UNIPROTKB|C9J355 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0051568 "histone H3-K4
methylation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
GO:GO:0005634 Gene3D:2.130.10.10 GO:GO:0051568 HGNC:HGNC:28826
ChiTaRS:WDR82 EMBL:AC092045 IPI:IPI00947344
ProteinModelPortal:C9J355 SMR:C9J355 STRING:C9J355
Ensembl:ENST00000463624 ArrayExpress:C9J355 Bgee:C9J355
Uniprot:C9J355
Length = 47
Score = 142 (55.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLV 175
D FISGSLD+T+ LWD R+ CQGL+ +QG+P ++D +GL+
Sbjct: 6 DTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLI 47
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 171 (65.3 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 72/301 (23%), Positives = 127/301 (42%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F+ ++ + S+ F S L +AS D +++++D + T+ V V F SH +
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVF-SHDS 317
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
++ S+ + D ++++ R KGH+D V S+ SGS DRTV +W
Sbjct: 318 RLLASASD--DGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIW- 374
Query: 150 QRAEKCQGLLRVQGRP--------AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFS 201
E GLLR + A+D + L A + GG ++++D R G
Sbjct: 375 ---ETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASA-SDGGNVKIWDTRT---GSLQNVL 427
Query: 202 VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS-FS 260
G D N V FS D RL+ + + + + + G+L T N + + FS
Sbjct: 428 EGHD-DCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLE----GHNDWVRSVVFS 482
Query: 261 PEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIP 320
+ + S S D +V W + + S D + ++ S + + S +++ I
Sbjct: 483 HDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIW 542
Query: 321 D 321
D
Sbjct: 543 D 543
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 60/256 (23%), Positives = 106/256 (41%)
Query: 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTT 90
+ +N + S+ F S + + S+D ++R+++ T T + V V F +H +
Sbjct: 344 KGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSF-AHDSR 402
Query: 91 VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQ 150
+ S+ +G + +++ +GH D V S+S S S DRTV +W
Sbjct: 403 RLASASDGGN--VKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHA 460
Query: 151 RAEKCQGLLRVQG---RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS 207
Q L R D L+ + + ++++D P D
Sbjct: 461 ATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATV---PLQNNLESHDNW 517
Query: 208 DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 267
+VV FS+D RL+ + + + + D+ G+L +T NS SFSP+ +
Sbjct: 518 VRSVV-FSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSV---SFSPDSRLLA 573
Query: 268 SGSGDGSVYAWSVRSG 283
S S DG+V W +G
Sbjct: 574 SASDDGTVKIWYAATG 589
Score = 150 (57.9 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 56/255 (21%), Positives = 105/255 (41%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F D+ + ++ F S L +ASD +++++D + + V+ V F+ P
Sbjct: 384 TFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFS--P 441
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
+ + +S + D ++++ R +GH+D V S+ S S D TV +W
Sbjct: 442 DSRLLASASD-DRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIW 500
Query: 149 DQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGD 205
D Q L R D L+ + + ++++D G + G D
Sbjct: 501 DTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTAT---GSLENTLEGHD 557
Query: 206 ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265
N V FS D RL+ + +G + + + GT+ T++ S + +FS
Sbjct: 558 -DRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDG---SGRVAISLAFSHTSNL 613
Query: 266 VISGSGDGSVYAWSV 280
+ S DG+V W +
Sbjct: 614 LASAMDDGTVKIWDM 628
Score = 149 (57.5 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 63/291 (21%), Positives = 117/291 (40%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
+N + S+ F S L +ASDD +++++D T + + V V F SH + +I
Sbjct: 304 HNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVF-SHDSRLI 362
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
S N D ++R+ F+ H D V+++S S S V +WD R
Sbjct: 363 ASGSN--DRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRT 420
Query: 153 EKCQGLLRVQG---RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDA 209
Q +L + D L+ + + ++++ A G G +
Sbjct: 421 GSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAAT---GSLQRTLEGHNDWVR 477
Query: 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269
+VV FS+D RL+ + + + + D+ T+ N++ N FS + + S
Sbjct: 478 SVV-FSHDSRLIASASDDMTVKIWDT--ATVPLQNNLESHD-NWVRSVVFSHDSRLLASA 533
Query: 270 SGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
S D +V W +G + D + ++P S + + S + + W
Sbjct: 534 SDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 122 (48.0 bits), Expect = 0.00074, P = 0.00074
Identities = 49/198 (24%), Positives = 86/198 (43%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
+N + S+ F S + +ASDD +++++D + S V V F SH + ++
Sbjct: 472 HNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVF-SHDSRLL 530
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
S+ + D ++++ +GH DRV S+S S S D TV +W
Sbjct: 531 ASASD--DMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAAT 588
Query: 153 EKCQGLLRVQGRPAA--AYDDQGLVFAVAFG-GYIRMFDARKYE-KGPFD----IFSVGG 204
Q GR A A+ + A A G ++++D Y + FD I +
Sbjct: 589 GTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDHEIQRIQF 648
Query: 205 DISDANVVKFSNDGRLML 222
D S ++++ +N GR+ L
Sbjct: 649 DKSMSSLI--TNVGRIQL 664
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 150 (57.9 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 59/233 (25%), Positives = 97/233 (41%)
Query: 10 DKVSLELSEEILQSMEVGMS--FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT 67
DK S ++ E I+ S ++G + + F +YL+++S+D +IRL+ + T
Sbjct: 473 DKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFT 532
Query: 68 CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSL 127
CL Y V F+ P + S G D RL + + LR F GH V
Sbjct: 533 CLVGYKGHNYPVWDTQFS--PFGYYFVS-GGHDRVARLWATDHYQPLRIFAGHLADVTCT 589
Query: 128 SLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAV-AFGGYI 184
+ + +GS DRTV LWD C + P + A+ G A + G +
Sbjct: 590 RFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRV 649
Query: 185 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237
++D G I + G +KFS DG ++ +++ + + D R
Sbjct: 650 LLWDIGH---GLM-IAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMR 698
Score = 137 (53.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 50/219 (22%), Positives = 90/219 (41%)
Query: 100 DESL-RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 158
D+ L R++ + + GH V +S ++ +S S D T+ LW + C L
Sbjct: 477 DDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTC--L 534
Query: 159 LRVQGRPAAAYDDQGLVFAVAF--GGY---IRMFDARKYEKGPFDIFSVGGDISDANVVK 213
+ +G +D Q F F GG+ R++ Y+ P IF+ G ++D +
Sbjct: 535 VGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQ--PLRIFA--GHLADVTCTR 590
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
F + + + + + + D G + + +S +FSP G F+ SGS DG
Sbjct: 591 FHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSL---AFSPNGKFLASGSTDG 647
Query: 274 SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS 312
V W + G +A +K++ + +GS
Sbjct: 648 RVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGS 686
Score = 117 (46.2 bits), Expect = 0.00091, P = 0.00091
Identities = 63/282 (22%), Positives = 112/282 (39%)
Query: 8 REDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT 67
+E + L E L S+ Y G ++++DF SS + D ++R++ VT
Sbjct: 401 KESTKRIRLGPETLPSICFYTFLNAYQG-LTAVDFTDDSSLIAGGFADSTVRVWSVTP-- 457
Query: 68 CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSL 127
K + K DL V+ + DE + ++K L GH V +
Sbjct: 458 --KKLRKVKSAADLNLIDKESDDVL---ERIMDEK----TSSESKILH---GHSGPVYGV 505
Query: 128 SLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF--GGY-- 183
S ++ +S S D T+ LW + C L+ +G +D Q F F GG+
Sbjct: 506 SFSPDRNYLLSSSEDGTIRLWSLQTFTC--LVGYKGHNYPVWDTQFSPFGYYFVSGGHDR 563
Query: 184 -IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS 242
R++ Y+ P IF+ G ++D +F + + + + + + D G +
Sbjct: 564 VARLWATDHYQ--PLRIFA--GHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVR 619
Query: 243 TY--NVKPV-----SRNSTLEASFSPEGMFVISGSGDGSVYA 277
+ + P+ S N AS S +G ++ G G + A
Sbjct: 620 IFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIA 661
Score = 59 (25.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 224 TTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270
T GHIH+ D+ + LL TY+ K + + F+ + + +GS
Sbjct: 709 TAATGHIHLPDNSQELLLGTYHSKSTA---VIHLHFTRRNLLLAAGS 752
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 157 (60.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 55/252 (21%), Positives = 104/252 (41%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F + G + S F+ ++S +TAS D +++L+D + + +I + V F+++
Sbjct: 51 TFEGHKGAVWSSRFNSTASQALTASADYTVKLWDTLNGSEILSIEHQSI-VKTADFSNNN 109
Query: 89 TTVIYSSKNGWDESLRLLSLH-DNKYLRYFKGHHDRVVSLSLC-SSKDCFISGSLDRTVL 146
+ V+ G ++ LR+ L N L GH + + + + + D +SG LD +
Sbjct: 110 SRVV---TGGSEKILRIFDLERPNDPLLQISGHTNTIKTATWSVHNDDIVLSGGLDEVIR 166
Query: 147 LWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
+WD R+ L + + G + +DA+ + P ++S+ D+
Sbjct: 167 IWDLRSGTQVSLCAKSSITSMEFSKDRRFLVTTAGNEVTFWDAQSFY--PLKVYSLPFDV 224
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 266
N D + + +HV D G + V FSP+G
Sbjct: 225 ---NCASLHPDNSKFIAGGSDFWVHVYDFSTGNEIE---VNKGHHGPVNCCRFSPDGASF 278
Query: 267 ISGSGDGSVYAW 278
SGS DG++ W
Sbjct: 279 ASGSLDGTIRLW 290
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 174 (66.3 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 64/298 (21%), Positives = 131/298 (43%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+ ++ G + S+ F LV+ S D++++++D L+T++ V+ + F+ P
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFS--P 802
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
+ +S +D ++ L + L+ F+GH + S++ S S D T+ +W
Sbjct: 803 DGKLLAS-GSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIW 861
Query: 149 DQRAEKCQGLL--RVQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGD 205
D + Q L Q + A+ G L+ + + I++++ E S+ G
Sbjct: 862 DLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQ----SLEGR 917
Query: 206 ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265
V FS DG+ + + + + + + G LL T S S +FSP+G
Sbjct: 918 SGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSV---AFSPDGKQ 974
Query: 266 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 323
+ S S D ++ W+ +G+ ++ D + ++P V+GS + + + DL+
Sbjct: 975 LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLA 1032
Score = 167 (63.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 65/306 (21%), Positives = 129/306 (42%)
Query: 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCF 84
E+ +F+ ++ I ++ F +LV+ SDD +I+L+D+ + +++ V V F
Sbjct: 993 ELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAF 1052
Query: 85 TSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRT 144
+ + SS D +++L + R +GH V S++ S S D T
Sbjct: 1053 SPDDKQLASSSL---DSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGT 1109
Query: 145 VLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFS 201
+ LW+ + Q L R + A+ G A + I+++D+ E + +
Sbjct: 1110 IKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGEL----LQT 1165
Query: 202 VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA-SFS 260
+ G V FS DG+L+ + + + D G LL + + +E+ +FS
Sbjct: 1166 LEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFE----GHSKWVESVAFS 1221
Query: 261 PEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP-GSLMFVTGSSELSFWI 319
P+G + S S ++ W +G+ + + D + ++P G+ + + W
Sbjct: 1222 PDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDTKIWD 1281
Query: 320 PDLSKL 325
P +L
Sbjct: 1282 PATGEL 1287
Score = 156 (60.0 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 61/246 (24%), Positives = 106/246 (43%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L + E+ S D++ + ++ F L ++S D +I+L+D +T+ GV
Sbjct: 1031 LATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVR 1090
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
V F+ P + +S N +D +++L + + + G D V S++ SG
Sbjct: 1091 SVTFS--PDGKLLAS-NSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGY 1147
Query: 141 LDRTVLLWDQRA-EKCQGLLRVQGR-PAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFD 198
D T+ LWD E Q L R + + G + +A G Y + A+ ++ +
Sbjct: 1148 YDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKL--LASGSYDQT--AKLWDPATGE 1203
Query: 199 IFSV-GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 257
+ + G V FS DG+L+ ++ I + D G LL T N S S
Sbjct: 1204 LLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSV--- 1260
Query: 258 SFSPEG 263
+FSP+G
Sbjct: 1261 AFSPDG 1266
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 65/301 (21%), Positives = 126/301 (41%)
Query: 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCF 84
E+ +F + I S+ F L +ASDD +I+++D+ +T++S V V F
Sbjct: 825 ELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAF 884
Query: 85 TSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRT 144
+ P + +S + D ++++ + + + +G V S++ SGS T
Sbjct: 885 S--PDGKLLASSS-LDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNT 941
Query: 145 VLLWDQRA-EKCQGLL-RVQGRPAAAYDDQGLVFAVAFGGY-IRMFDARKYEKGPFDIFS 201
V LW+ E Q L Q + A+ G A + I+++++ E F
Sbjct: 942 VKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQ--QTFK 999
Query: 202 VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP 261
G D+ V FS DG+ ++ + + I + D L + ++ SR S +FSP
Sbjct: 1000 -GHDLW-IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQS--LEDHSR-SVHAVAFSP 1054
Query: 262 EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWI 319
+ + S S D ++ W +G+ + + ++P + + S + + W
Sbjct: 1055 DDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN 1114
Query: 320 P 320
P
Sbjct: 1115 P 1115
Score = 37 (18.1 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 14/56 (25%), Positives = 21/56 (37%)
Query: 5 QSEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRL 60
Q + + V L + V + F+ + +MD H S T D SI L
Sbjct: 331 QVQESESVRLRFFMTSRPELPVRLGFKAVENSLQNMDLHSIPSSETTR--DVSIFL 384
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 148 (57.2 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 39/136 (28%), Positives = 70/136 (51%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
+N ++S++F+ S +V+ DDE++R++DV CL T+ V F ++ +
Sbjct: 46 HNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLYGHSTNVFATNFLNNDNRKV 105
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQR 151
S N D +R + + K Y K H +V+ LS+C ++ F+S S D +V L+D R
Sbjct: 106 ISGGN--DADIRYYDIENQKCTVY-KHHSKKVLKLSVCPTQPQVFLSSSSDGSVRLFDVR 162
Query: 152 AE-KCQGLLRVQGRPA 166
+ K + +Q P+
Sbjct: 163 LKYKDTEIQPIQTAPS 178
Score = 62 (26.9 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 17/75 (22%), Positives = 28/75 (37%)
Query: 249 VSRNSTLEASF-SPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLM 307
VS + +F P +++SGS D ++ W S K V D+ + P
Sbjct: 777 VSEQTIKSVNFYGPNSEYIVSGSDDSKLFIWDKESAKIVRILEGHDSHVNSVVCHPNEPC 836
Query: 308 FVTGSSE--LSFWIP 320
T + + W P
Sbjct: 837 IATSGIDPYICLWEP 851
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 158 (60.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 55/211 (26%), Positives = 100/211 (47%)
Query: 5 QSEREDKVSL-ELSEEILQSMEV--GMSFRDYNGR---ISSMDFHKSSSYLVTA-SDDES 57
Q R+ +V S+ L S + G R + G ++++D K S L+T+ SDD +
Sbjct: 100 QWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCT 159
Query: 58 IRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 117
++++D + C+KTI +KY + V T V G D ++++ L +N
Sbjct: 160 MKVWDSRSKDCIKTIE-EKYPLTAVAIAQQGTQVFIG---GIDGAIKIWDLRNNHCSHVL 215
Query: 118 KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLRV-QGRPAAAYDDQGLV 175
KGH D + SL++ +S S+D TV ++D + Q L++ +G A + + +
Sbjct: 216 KGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEG---AIHGQEHNL 272
Query: 176 FAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
VA+ R A +K + ++S GD+
Sbjct: 273 LGVAWSRNSRFVGAGSSDKNVY-VWSATGDL 302
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 63/248 (25%), Positives = 100/248 (40%)
Query: 42 FHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSKKYGV-DLVCFTSHPTTVIYSSKNGW 99
F S SY + D I L++V +N K + DL S + V+Y S +
Sbjct: 58 FDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQW--SRDSRVVYCSSS-- 113
Query: 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGL 158
D L + +R KGH V +L + + S S D T+ +WD R++ C
Sbjct: 114 DTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKT 173
Query: 159 LRVQ-GRPAAAYDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN 216
+ + A A QG VF G I+++D R + DI + + S
Sbjct: 174 IEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCS--HVLKGHKDIITSLAI--SK 229
Query: 217 DGRLMLLTTMEGHIHVLD-----SFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 271
DG +L +M+ + + D S + L ++ L ++S FV +GS
Sbjct: 230 DGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSS 289
Query: 272 DGSVYAWS 279
D +VY WS
Sbjct: 290 DKNVYVWS 297
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 162 (62.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 67/294 (22%), Positives = 122/294 (41%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L S ++ ++ + I + K + YL + +D ++ +D+ ++ + GV
Sbjct: 315 LASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGV- 373
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
C + HP+ + S G D +R+ + + GH V+S+ S + +SGS
Sbjct: 374 -YCLSLHPSLDLLMS-GGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGS 431
Query: 141 LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGY--IRMFDARKYEKGPFD 198
D+ + LWD KC+ L + + ++ G ++++ E FD
Sbjct: 432 QDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAE---FD 488
Query: 199 IFSVG-GDISDANVVK---FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS---- 250
G I + +++K + ND +++L + G +H D G T + K V
Sbjct: 489 RNITGFNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGTVE 548
Query: 251 -RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP 303
NSTL +F +I+ GD S+ W E A+ +F P IKW P
Sbjct: 549 CENSTLSMAFDKSESRLITTHGDKSIKIWKEN---EDATPENF----P-IKWNP 594
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGV-DLVCFTSHPTTV 91
++G ++ +D S+ + T S+D I+++D+ + T+ + D+ +P
Sbjct: 285 HSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNP--- 341
Query: 92 IYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151
Y G D ++ L NK +R + GH V LSL S D +SG D V +WD R
Sbjct: 342 -YLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIR 400
Query: 152 AE 153
+
Sbjct: 401 TK 402
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 162 (62.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 67/294 (22%), Positives = 122/294 (41%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L S ++ ++ + I + K + YL + +D ++ +D+ ++ + GV
Sbjct: 315 LASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGV- 373
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
C + HP+ + S G D +R+ + + GH V+S+ S + +SGS
Sbjct: 374 -YCLSLHPSLDLLMS-GGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGS 431
Query: 141 LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGY--IRMFDARKYEKGPFD 198
D+ + LWD KC+ L + + ++ G ++++ E FD
Sbjct: 432 QDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAE---FD 488
Query: 199 IFSVG-GDISDANVVK---FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS---- 250
G I + +++K + ND +++L + G +H D G T + K V
Sbjct: 489 RNITGFNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGTVE 548
Query: 251 -RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP 303
NSTL +F +I+ GD S+ W E A+ +F P IKW P
Sbjct: 549 CENSTLSMAFDKSESRLITTHGDKSIKIWKEN---EDATPENF----P-IKWNP 594
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGV-DLVCFTSHPTTV 91
++G ++ +D S+ + T S+D I+++D+ + T+ + D+ +P
Sbjct: 285 HSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNP--- 341
Query: 92 IYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151
Y G D ++ L NK +R + GH V LSL S D +SG D V +WD R
Sbjct: 342 -YLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIR 400
Query: 152 AE 153
+
Sbjct: 401 TK 402
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 162 (62.1 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 65/253 (25%), Positives = 109/253 (43%)
Query: 33 YNGRISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTV 91
++ +SS+ KSS L+ T +D + ++ V+ C+ ++ V + F S V
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERV 78
Query: 92 IYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151
+ S +G SLRL L K LR GH + SL + SGS+D + LWD R
Sbjct: 79 VAGSLSG---SLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVR 135
Query: 152 AEKCQGLLRVQGRPAA----AYDDQGLVFAVAFG-GYIRMFDARKYEKGPFDIFSVGGDI 206
+ C + R +G A A+ G A A ++++D G I
Sbjct: 136 RKGC--VFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIA---GKM-ITEFTSHT 189
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 266
S NVV+F + L+ + + + + D + ++ + + S L F+P+G +
Sbjct: 190 SAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVL---FNPDGSCL 246
Query: 267 ISGSGDG-SVYAW 278
SGS + VY W
Sbjct: 247 YSGSENTLRVYGW 259
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 42/148 (28%), Positives = 66/148 (44%)
Query: 4 SQSEREDKVSLELSEEI--LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLY 61
S ER SL S + L++ ++ + + ISS+DFH YL + S D +I+L+
Sbjct: 73 SSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLW 132
Query: 62 DVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH 121
DV C+ V + F+ + +S D +++L L K + F H
Sbjct: 133 DVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASD---DSTVKLWDLIAGKMITEFTSHT 189
Query: 122 DRVVSLSLCSSKDCFISGSLDRTVLLWD 149
V + ++ SGS DRTV LWD
Sbjct: 190 SAVNVVQFHPNEYLLASGSADRTVKLWD 217
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 36/127 (28%), Positives = 56/127 (44%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87
MS + + + F+ S +V S S+RL+D+ AA L+T+ K + + F H
Sbjct: 57 MSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDF--H 114
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
P Y + D +++L + + +KGH V L+ S S D TV L
Sbjct: 115 PMGE-YLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKL 173
Query: 148 WDQRAEK 154
WD A K
Sbjct: 174 WDLIAGK 180
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 50/213 (23%), Positives = 89/213 (41%)
Query: 119 GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAV 178
GH V + SS++ ++GSL ++ LWD A K L ++ D + +
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL 120
Query: 179 AFGGY---IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDS 235
A G I+++D R+ KG +F G + FS DG+ + + + + + D
Sbjct: 121 ASGSVDSNIKLWDVRR--KGC--VFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDL 176
Query: 236 FRGTLLSTYNVKPVSRNSTLEA-SFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDT 294
G +++ + S S + F P + SGS D +V W + + S +
Sbjct: 177 IAGKMITEFT----SHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGS---SEG 229
Query: 295 EPPVIK---WTP-GSLMFVTGSSELSF--WIPD 321
E V++ + P GS ++ + L W PD
Sbjct: 230 ETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPD 262
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 163 (62.4 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 69/341 (20%), Positives = 138/341 (40%)
Query: 2 VGSQSEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLY 61
VG Q + +D + ++ + F N + FH S+ LV + LY
Sbjct: 226 VGPQDKEDDDMDGADESDLRWRIVKRHYFMQNNASLKCAAFHAESNLLVAGFSNGIFGLY 285
Query: 62 DVTAATCLKTINSKKYGVDLVCFTSHPTTVIY-SSKNGWDESLRLLSLHDNKYLRYFKGH 120
++ + T++ + G+D V + + +SK G L + Y+ +GH
Sbjct: 286 EMPDFNLIHTLSISQNGIDFVSINKSGEWLAFGASKLG---QLLVWEWQSESYILKQQGH 342
Query: 121 HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQG-LVFA 177
D + +L+ ++ + D + +WD + C G A + +G ++F
Sbjct: 343 FDSMNALAYSPDGKRIVTAADDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVLFT 402
Query: 178 VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGH-IHVLDSF 236
+ G IR +D +Y F F+ +S + + G ++ +++ +H+
Sbjct: 403 ASLDGSIRAWDLIRYRN--FRTFTAPTRLS-FSCMAVDPSGEVVAAGSLDSFDVHIWSVQ 459
Query: 237 RGTLLSTYNVK--PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDT 294
G LL + PVS +F+P+G ++SGS D + WSV + + + +
Sbjct: 460 TGQLLDQLSGHEGPVSA-----VAFAPDGGLLVSGSWDKTARIWSVFNRTQTSEPLQLQA 514
Query: 295 EPPVIKWTPGS--LMFVTGSSELSFW-IPDLSKLGAYVGRK 332
+ + P S L T ++SFW + + ++ GR+
Sbjct: 515 DVLSVAVRPDSSQLAVSTLDGQISFWSVTEAQQVSGVDGRR 555
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 155 (59.6 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 58/243 (23%), Positives = 97/243 (39%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
+ G + S F + ++S D SIRL+DV + CL + + V+ V F+ P +
Sbjct: 67 HRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFS--PDSKQ 124
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
+S GWD+ + + + + GH D + S + D +GS D TV +WD RA
Sbjct: 125 LAS-GGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRA 183
Query: 153 EK-CQGLLRVQGRPA----AAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS 207
++G Y GL+ A G + + K + G I
Sbjct: 184 STPVVSYHNLEGHTGNISCLCYSASGLL---ASGSWDKTICVWKPTTNNLPLQLKGHTIW 240
Query: 208 DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 267
N + FS D + + V D G L T ++ + F+P+G ++
Sbjct: 241 -VNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACI---FTPDGKLLV 296
Query: 268 SGS 270
SG+
Sbjct: 297 SGA 299
>RGD|1311400 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1311400 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 CTD:89849 OrthoDB:EOG44F68R
IPI:IPI00196362 RefSeq:NP_001178489.1 UniGene:Rn.104199
ProteinModelPortal:D4A9M7 Ensembl:ENSRNOT00000026286 GeneID:308865
KEGG:rno:308865 UCSC:RGD:1311400 NextBio:659687 Uniprot:D4A9M7
Length = 623
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 65/290 (22%), Positives = 125/290 (43%)
Query: 2 VGSQSE-REDKVSLELSEEI-LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIR 59
VG SE R + + +S +I Q+ +V + ++++ F +SS L T D I
Sbjct: 309 VGGVSEQRYQSIPVCVSAQIPSQAQDV---LDAHLSEVNAVCFAPNSSLLATGGADRLIH 365
Query: 60 LYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 117
L++V +T+ + V F + V+ ++ N ++ +L + + +
Sbjct: 366 LWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYN---QAAQLWKVGETQSKETL 422
Query: 118 KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFA 177
GH D+V + ++ ++GS DRTV WD C + V ++ +
Sbjct: 423 SGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHIIIS 482
Query: 178 VAFGGYIRMFDARKYEKGP--FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDS 235
IR +D+R GP + V G ++ N+ S+D +L + + + V+D
Sbjct: 483 GHNDQKIRFWDSR----GPHCIQVIPVQGRVTSLNL---SHDQLHLLSCSRDNTLKVIDL 535
Query: 236 FRGTLLSTYNVKPVSRNST-LEASFSPEGMFVISGSGDGSVYAWSVRSGK 284
+ + +S +A FSP+ + + GS +G++Y W V +GK
Sbjct: 536 RISNIRQVFRADGFKCSSDWTKAVFSPDRSYALVGSSNGTLYIWDVNTGK 585
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 55/202 (27%), Positives = 101/202 (50%)
Query: 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104
+ S LVT S D ++R++DV + L T++ V V F TTV+ G+D +++
Sbjct: 347 AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDG--TTVV---SGGYDFTVK 401
Query: 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD-QRAE--KCQGLLRV 161
+ + H + +R GH++RV SL S + SGSLD ++ +WD R E +C LL+
Sbjct: 402 IWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQG 461
Query: 162 QGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRL 220
+ +G ++ + ++R++D + G + + G S +++ GR
Sbjct: 462 HTSLTSGMQLRGNILVSCNADSHVRVWDIHE---GTC-VHMLSGHRSAITSLQWF--GRN 515
Query: 221 MLLTTME-GHIHVLDSFRGTLL 241
M+ T+ + G + + D RG L+
Sbjct: 516 MVATSSDDGTVKLWDIERGALI 537
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 55/202 (27%), Positives = 101/202 (50%)
Query: 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104
+ S LVT S D ++R++DV + L T++ V V F TTV+ G+D +++
Sbjct: 347 AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDG--TTVV---SGGYDFTVK 401
Query: 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD-QRAE--KCQGLLRV 161
+ + H + +R GH++RV SL S + SGSLD ++ +WD R E +C LL+
Sbjct: 402 IWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQG 461
Query: 162 QGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRL 220
+ +G ++ + ++R++D + G + + G S +++ GR
Sbjct: 462 HTSLTSGMQLRGNILVSCNADSHVRVWDIHE---GTC-VHMLSGHRSAITSLQWF--GRN 515
Query: 221 MLLTTME-GHIHVLDSFRGTLL 241
M+ T+ + G + + D RG L+
Sbjct: 516 MVATSSDDGTVKLWDIERGALI 537
>SGD|S000000379 [details] [associations]
symbol:SWD3 "Essential subunit of the COMPASS (Set1C)
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005694
"chromosome" evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0048188 "Set1C/COMPASS complex" evidence=IPI]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA;IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000379 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936
GO:GO:0006348 GO:GO:0048188 GO:GO:0051568 GO:GO:0000781
GO:GO:0000723 KO:K14963 OrthoDB:EOG49CTJ0 EMBL:Z36043 EMBL:AY693212
PIR:S46046 RefSeq:NP_009734.1 ProteinModelPortal:P38123 SMR:P38123
DIP:DIP-1754N IntAct:P38123 MINT:MINT-393581 STRING:P38123
PaxDb:P38123 PeptideAtlas:P38123 EnsemblFungi:YBR175W GeneID:852472
KEGG:sce:YBR175W CYGD:YBR175w HOGENOM:HOG000091642 OMA:IRIWCAR
NextBio:971432 Genevestigator:P38123 GermOnline:YBR175W
Uniprot:P38123
Length = 315
Score = 154 (59.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 54/239 (22%), Positives = 108/239 (45%)
Query: 57 SIRLYDVTAATCLKT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 115
+I +YD+ T +T + S +C++ + +S D S+ ++ L L
Sbjct: 35 NILIYDINRRTVSQTLVTSHARPFSELCWSPDGQCIATASD---DFSVEIIHLSYG-LLH 90
Query: 116 YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYD----D 171
F GH V+SL+ + + S+D ++ +WD + + D D
Sbjct: 91 TFIGHTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKTISAHSEAVVSVDVPMND 150
Query: 172 QGLVFAVAFGGYIRMFDARK---YEKGPFDI-FSVGGDISDANVVKFSNDGRLMLLTTME 227
++ + ++ G IR+FDA + +D + + + VKFS + R +L+ +++
Sbjct: 151 SSILSSGSYDGLIRIFDAETGHCLKTLTYDKDWKRENGVVPISQVKFSENARYLLVKSLD 210
Query: 228 GHIHVLDSFRGTLLSTYNVKPVSR---NSTLEASF-SPE-GM--FVISGSGDGSVYAWS 279
G + + D G ++ T+ V+P+ + + + F +PE G VISG +G +Y W+
Sbjct: 211 GVVKIWDCIGGCVVRTFQVQPLEKGVLHHSCGMDFLNPEDGSTPLVISGYENGDIYCWN 269
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 65/262 (24%), Positives = 109/262 (41%)
Query: 37 ISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS 95
+SS+ K+S L+ T DD + L+ + C+ ++ V+ V + ++ S
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
++G S+R+ L K LR GH + SL + SGS D + LWD R + C
Sbjct: 83 QSG---SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC 139
Query: 156 QGLLRVQGRPAAA----YDDQGLVFAVAFGGY-IRMFDARKYEKGPFDIFSVGGDISDAN 210
+ R +G A + G A A + ++++D G + G N
Sbjct: 140 --VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA---GKM-MSEFPGHTGPVN 193
Query: 211 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270
VV+F + L+ + + I D + ++S +P S L F+P+G + SG
Sbjct: 194 VVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL---FNPDGCCLYSGC 250
Query: 271 GDG-SVYAWSVRSGKEVA--SW 289
D VY W +V SW
Sbjct: 251 QDSLRVYGWEPERCFDVVLVSW 272
Score = 136 (52.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 57/242 (23%), Positives = 103/242 (42%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L++ ++ + + I S+DFH ++ + S D +I+L+D+ C+ V
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
C P +S D +++L L K + F GH V + ++ SGS
Sbjct: 152 --CLRFSPDGKWLASAAD-DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 141 LDRTVLLWDQRAEKCQGLLRVQGRP----AAAYDDQGLVFAVAFGGYIRMFDARKYEKGP 196
DRT+ WD EK Q + ++G P + ++ G +R++ E+
Sbjct: 209 SDRTIRFWD--LEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP-ERC- 264
Query: 197 FDIFSVG-GDISDANVVKFSNDGRLMLLTTMEGHI--HVLDSFRGTLLSTYNVKPVSRNS 253
FD+ V G ++D V ND +L+ + + ++ +V+D R T T PV +
Sbjct: 265 FDVVLVSWGKVADLAVC---ND-QLIGVAFSQSNVSSYVVDLTRVTRTGTVAQDPVQDSR 320
Query: 254 TL 255
L
Sbjct: 321 PL 322
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 45/194 (23%), Positives = 76/194 (39%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87
MS + + S+ + +V S SIR++D+ AA L+T+ K + + F H
Sbjct: 57 MSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF--H 114
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
P +S D +++L + + ++GH V L S + D TV L
Sbjct: 115 PYGEFVAS-GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGY---IRMFDARKYEKGPFDIFSVGG 204
WD A K P + + +A G IR +D K++ + + G
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV----VSCIEG 229
Query: 205 DISDANVVKFSNDG 218
+ V F+ DG
Sbjct: 230 EPGPVRSVLFNPDG 243
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 62/249 (24%), Positives = 105/249 (42%)
Query: 37 ISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS 95
+SS+ K+S L+ T DD + L+ + C+ ++ V+ V + ++ S
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
++G S+R+ L K LR GH + SL + SGS D + LWD R + C
Sbjct: 83 QSG---SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC 139
Query: 156 QGLLRVQGRPAAA----YDDQGLVFAVAFGGY-IRMFDARKYEKGPFDIFSVGGDISDAN 210
+ R +G A + G A A + ++++D G + G N
Sbjct: 140 --VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA---GKM-MSEFPGHTGPVN 193
Query: 211 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270
VV+F + L+ + + I D + ++S +P S L F+P+G + SG
Sbjct: 194 VVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL---FNPDGCCLYSGC 250
Query: 271 GDG-SVYAW 278
D VY W
Sbjct: 251 QDSLRVYGW 259
Score = 136 (52.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 55/236 (23%), Positives = 101/236 (42%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L++ ++ + + I S+DFH ++ + S D +I+L+D+ C+ V
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
C P +S D +++L L K + F GH V + ++ SGS
Sbjct: 152 --CLRFSPDGKWLASAAD-DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 141 LDRTVLLWDQRAEKCQGLLRVQGRP----AAAYDDQGLVFAVAFGGYIRMFDARKYEKGP 196
DRT+ WD EK Q + ++G P + ++ G +R++ E+
Sbjct: 209 SDRTIRFWD--LEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP-ERC- 264
Query: 197 FDIFSVG-GDISDANVVKFSNDGRLMLLTTMEGHI--HVLDSFRGTLLSTYNVKPV 249
FD+ V G ++D + ND +L+ + + ++ +V+D R T T PV
Sbjct: 265 FDVVLVNWGKVADLAIC---ND-QLIGVAFSQSNVSSYVVDLTRVTRTGTVTQDPV 316
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 45/194 (23%), Positives = 76/194 (39%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87
MS + + S+ + +V S SIR++D+ AA L+T+ K + + F H
Sbjct: 57 MSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF--H 114
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
P +S D +++L + + ++GH V L S + D TV L
Sbjct: 115 PYGEFVAS-GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGY---IRMFDARKYEKGPFDIFSVGG 204
WD A K P + + +A G IR +D K++ + + G
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV----VSCIEG 229
Query: 205 DISDANVVKFSNDG 218
+ V F+ DG
Sbjct: 230 EPGPVRSVLFNPDG 243
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 62/249 (24%), Positives = 105/249 (42%)
Query: 37 ISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS 95
+SS+ K+S L+ T DD + L+ + C+ ++ V+ V + ++ S
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
++G S+R+ L K LR GH + SL + SGS D + LWD R + C
Sbjct: 83 QSG---SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC 139
Query: 156 QGLLRVQGRPAAA----YDDQGLVFAVAFGGY-IRMFDARKYEKGPFDIFSVGGDISDAN 210
+ R +G A + G A A + ++++D G + G N
Sbjct: 140 --VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA---GKM-MSEFPGHTGPVN 193
Query: 211 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270
VV+F + L+ + + I D + ++S +P S L F+P+G + SG
Sbjct: 194 VVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL---FNPDGCCLYSGC 250
Query: 271 GDG-SVYAW 278
D VY W
Sbjct: 251 QDSLRVYGW 259
Score = 134 (52.2 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 56/242 (23%), Positives = 103/242 (42%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L++ ++ + + I S+DFH ++ + S D +I+L+D+ C+ V
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
C P +S D +++L L K + F GH V + ++ SGS
Sbjct: 152 --CLRFSPDGKWLASAAD-DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 141 LDRTVLLWDQRAEKCQGLLRVQGRP----AAAYDDQGLVFAVAFGGYIRMFDARKYEKGP 196
DRT+ WD EK Q + ++G P + ++ G +R++ E+
Sbjct: 209 SDRTIRFWD--LEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP-ERC- 264
Query: 197 FDIFSVG-GDISDANVVKFSNDGRLMLLTTMEGHI--HVLDSFRGTLLSTYNVKPVSRNS 253
FD+ V G ++D + ND +L+ + + ++ +V+D R T T PV +
Sbjct: 265 FDVVLVNWGKVADLAIC---ND-QLIGVAFSQSNVSSYVVDLTRVTRTGTVARDPVQDHR 320
Query: 254 TL 255
L
Sbjct: 321 PL 322
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 45/194 (23%), Positives = 76/194 (39%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87
MS + + S+ + +V S SIR++D+ AA L+T+ K + + F H
Sbjct: 57 MSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF--H 114
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
P +S D +++L + + ++GH V L S + D TV L
Sbjct: 115 PYGEFVAS-GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGY---IRMFDARKYEKGPFDIFSVGG 204
WD A K P + + +A G IR +D K++ + + G
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV----VSCIEG 229
Query: 205 DISDANVVKFSNDG 218
+ V F+ DG
Sbjct: 230 EPGPVRSVLFNPDG 243
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 62/249 (24%), Positives = 105/249 (42%)
Query: 37 ISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS 95
+SS+ K+S L+ T DD + L+ + C+ ++ V+ V + ++ S
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
++G S+R+ L K LR GH + SL + SGS D + LWD R + C
Sbjct: 83 QSG---SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC 139
Query: 156 QGLLRVQGRPAAA----YDDQGLVFAVAFGGY-IRMFDARKYEKGPFDIFSVGGDISDAN 210
+ R +G A + G A A + ++++D G + G N
Sbjct: 140 --VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA---GKM-MSEFPGHTGPVN 193
Query: 211 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270
VV+F + L+ + + I D + ++S +P S L F+P+G + SG
Sbjct: 194 VVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVL---FNPDGCCLYSGC 250
Query: 271 GDG-SVYAW 278
D VY W
Sbjct: 251 QDSLRVYGW 259
Score = 144 (55.7 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 57/242 (23%), Positives = 103/242 (42%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L++ ++ + + I S+DFH ++ + S D +I+L+D+ C+ V
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
C P +S D +++L L K + F GH V + ++ SGS
Sbjct: 152 --CLRFSPDGKWLASAAD-DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 141 LDRTVLLWDQRAEKCQGLLRVQGRP----AAAYDDQGLVFAVAFGGYIRMFDARKYEKGP 196
DRT+ WD EK Q + ++G P + ++ G +R++ E+
Sbjct: 209 SDRTIRFWD--LEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP-ERC- 264
Query: 197 FDIFSVG-GDISDANVVKFSNDGRLMLLTTMEGHI--HVLDSFRGTLLSTYNVKPVSRNS 253
FD+ V G ++D + ND +L+ + + ++ +V+D R T T PV N
Sbjct: 265 FDVVLVNWGKVADLAIC---ND-QLIGVAFSQSNVSSYVVDLTRVTRTGTVTQDPVQANQ 320
Query: 254 TL 255
L
Sbjct: 321 PL 322
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 45/194 (23%), Positives = 76/194 (39%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87
MS + + S+ + +V S SIR++D+ AA L+T+ K + + F H
Sbjct: 57 MSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF--H 114
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
P +S D +++L + + ++GH V L S + D TV L
Sbjct: 115 PYGEFVAS-GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGY---IRMFDARKYEKGPFDIFSVGG 204
WD A K P + + +A G IR +D K++ + + G
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV----VSCIEG 229
Query: 205 DISDANVVKFSNDG 218
+ V F+ DG
Sbjct: 230 EPGPVRSVLFNPDG 243
>ZFIN|ZDB-GENE-040808-14 [details] [associations]
symbol:thoc3 "THO complex 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040808-14 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 KO:K12880
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BX511257 EMBL:BC079495 EMBL:BC152622
IPI:IPI00485776 RefSeq:NP_001003758.1 UniGene:Dr.78573
STRING:Q6AXK9 Ensembl:ENSDART00000079016 GeneID:445302
KEGG:dre:445302 InParanoid:Q6AXK9 NextBio:20832048 Uniprot:Q6AXK9
Length = 322
Score = 152 (58.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 49/225 (21%), Positives = 95/225 (42%)
Query: 95 SKNGWDESLRLLSLHDNKYLRY--FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQR 151
+ +D++ + L ++ ++ ++GH D V L ++ D F++ S D+T+ +WD R
Sbjct: 42 ASGSFDKTASVFVLEKDRLVKENNYRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWDVR 101
Query: 152 AEKCQGLLRVQGRPA-AAYDDQGLVFAVAFGGYIRMF-DARKYEKGPFDIFSVGGDISDA 209
KC + +G + G AV + F DA+ + + F +
Sbjct: 102 TTKCMATVSTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRPRAEEQFKF-----EV 156
Query: 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269
N + ++ND + LT G I++L L+ + N P ++ + F P G + +G
Sbjct: 157 NEISWNNDNDMFFLTNGNGCINILSYPELKLIQSINAHP---SNCICIKFDPTGKYFATG 213
Query: 270 SGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
S D V W+V V + D + ++ M + S +
Sbjct: 214 SADALVSLWNVEELVCVRCFSRLDWPVRTLSFSHDGKMLASASED 258
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 62/249 (24%), Positives = 105/249 (42%)
Query: 37 ISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS 95
+SS+ K+S L+ T DD + L+ + C+ ++ V+ V + ++ S
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
++G S+R+ L K LR GH + SL + SGS D + LWD R + C
Sbjct: 83 QSG---SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC 139
Query: 156 QGLLRVQGRPAAA----YDDQGLVFAVAFGGY-IRMFDARKYEKGPFDIFSVGGDISDAN 210
+ R +G A + G A A + ++++D G + G N
Sbjct: 140 --VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA---GKM-MSEFPGHTGPVN 193
Query: 211 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270
VV+F + L+ + + I D + ++S +P S L F+P+G + SG
Sbjct: 194 VVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSIL---FNPDGCCLYSGC 250
Query: 271 GDG-SVYAW 278
D VY W
Sbjct: 251 QDSLRVYGW 259
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/145 (25%), Positives = 64/145 (44%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L++ ++ + + I S+DFH ++ + S D +I+L+D+ C+ V
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
C P +S D +++L L K + F GH V + ++ SGS
Sbjct: 152 --CLRFSPDGKWLASAAD-DHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 141 LDRTVLLWDQRAEKCQGLLRVQGRP 165
DRT+ WD EK Q + ++G P
Sbjct: 209 SDRTIRFWD--LEKFQVVSCIEGEP 231
Score = 116 (45.9 bits), Expect = 0.00099, P = 0.00099
Identities = 44/194 (22%), Positives = 76/194 (39%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87
MS + + S+ + +V S SIR++D+ AA L+T+ K + + F H
Sbjct: 57 MSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF--H 114
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
P +S D +++L + + ++GH V L S + D TV L
Sbjct: 115 PYGEFVAS-GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGY---IRMFDARKYEKGPFDIFSVGG 204
WD A K P + + +A G IR +D K++ + + G
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV----VSCIEG 229
Query: 205 DISDANVVKFSNDG 218
+ + F+ DG
Sbjct: 230 EPGPVRSILFNPDG 243
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 152 (58.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 69/327 (21%), Positives = 130/327 (39%)
Query: 10 DKVSLELSEEILQSMEVG-MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC 68
DK LE +++ M + G I + +FH L+++ D I ++ V C
Sbjct: 30 DKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYE-DC 88
Query: 69 --LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS 126
+ ++ V FT + + S D++L + + R FKGH + V S
Sbjct: 89 ENVMAMSGHSGAVMEAHFTPDGSHIFTCST---DKTLAFWDIATGQRQRRFKGHGNFVNS 145
Query: 127 LSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQG-LVFAVAFGGY 183
+ + SGS DRT+ +WD R + L + A + D G V +
Sbjct: 146 VQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNE 205
Query: 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLST 243
++++D RK + + G + S +G +L M+ + V D R
Sbjct: 206 VKIWDIRKQAV----LHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWD-VRPYAPGE 260
Query: 244 YNVKPVS------RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPP 297
VK + L ++SP + SGS D VY W V + + + +
Sbjct: 261 RCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVN 320
Query: 298 VIKWTPGSLMFVTGSSELSFWIPDLSK 324
+ ++P + ++GSS+ + ++ ++ +
Sbjct: 321 AVDFSPKEPLILSGSSDKTLYLGEIDE 347
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 155 (59.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 52/210 (24%), Positives = 98/210 (46%)
Query: 82 VCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL 141
VCF+ P + ++ D+ +R+ L + ++ +GH + SL D +SGS
Sbjct: 261 VCFS--PDGKLLAT-GAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 142 DRTVLLWDQRAEKCQGLLRVQ-GRPAAAYDDQG-LVFAVAFGGYIRMFDARK-YEKGPFD 198
DR+V +WD R +C L ++ G A G L+ A + +R++D+ + D
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLD 377
Query: 199 IFSVGGDISDANV--VKFSNDGRLMLLTTMEGHIHV--LDSFRGTLLSTYNVKPVS-RNS 253
+ G+ + +V V FSN+G + +++ + + L+ + ST V + ++
Sbjct: 378 SGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG-KSDKKSTCEVTYIGHKDF 436
Query: 254 TLEASFSPEGMFVISGSGDGSVYAWSVRSG 283
L +P+ +++SGS D V W SG
Sbjct: 437 VLSVCCTPDNEYILSGSKDRGVIFWDQASG 466
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTT 90
R + I S+DF LV+ S D S+R++D+ + C T++ + GV V +
Sbjct: 294 RGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIED-GVTTVAVSPDGKL 352
Query: 91 VIYSSKNG----WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
+ S + WD + L + GH D V S++ ++ + SGSLDRTV
Sbjct: 353 IAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVK 412
Query: 147 LW 148
LW
Sbjct: 413 LW 414
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 155 (59.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 52/210 (24%), Positives = 98/210 (46%)
Query: 82 VCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL 141
VCF+ P + ++ D+ +R+ L + ++ +GH + SL D +SGS
Sbjct: 261 VCFS--PDGKLLAT-GAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 142 DRTVLLWDQRAEKCQGLLRVQ-GRPAAAYDDQG-LVFAVAFGGYIRMFDARK-YEKGPFD 198
DR+V +WD R +C L ++ G A G L+ A + +R++D+ + D
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLD 377
Query: 199 IFSVGGDISDANV--VKFSNDGRLMLLTTMEGHIHV--LDSFRGTLLSTYNVKPVS-RNS 253
+ G+ + +V V FSN+G + +++ + + L+ + ST V + ++
Sbjct: 378 SGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG-KSDKKSTCEVTYIGHKDF 436
Query: 254 TLEASFSPEGMFVISGSGDGSVYAWSVRSG 283
L +P+ +++SGS D V W SG
Sbjct: 437 VLSVCCTPDNEYILSGSKDRGVIFWDQASG 466
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTT 90
R + I S+DF LV+ S D S+R++D+ + C T++ + GV V +
Sbjct: 294 RGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIED-GVTTVAVSPDGKL 352
Query: 91 VIYSSKNG----WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
+ S + WD + L + GH D V S++ ++ + SGSLDRTV
Sbjct: 353 IAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVK 412
Query: 147 LW 148
LW
Sbjct: 413 LW 414
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 156 (60.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 61/249 (24%), Positives = 106/249 (42%)
Query: 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYS 94
G ++S+ H + Y+V + D+ I +YD KT+ GV + P I
Sbjct: 254 GVVTSL--HLTPKYIVASLDNAKIHVYDTNGEN-QKTLEGHVMGV----WAMVPWDNILV 306
Query: 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
S G D +R+ ++ + + +GH V L + S K+ ISGS D T+ +WD R
Sbjct: 307 S-GGCDREVRVWNMATGESIYLLRGHTSTVRCLKM-SDKNTAISGSRDTTLRIWDLRTGT 364
Query: 155 CQGLL---RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANV 211
C+ +L + R A + D V G Y +G F + ++ G S
Sbjct: 365 CRSVLVGHQASVRCLAVHGD-----IVVSGSYDTTARVWSISEGRF-LRALSGHFSQIYA 418
Query: 212 VKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 271
+ F DGR + +++ + + D G + + +++L G +++G
Sbjct: 419 IAF--DGRRIATGSLDTSVRIWDPNTGQCHAI-----LQGHTSLVGQLQMSGDTLVTGGS 471
Query: 272 DGSVYAWSV 280
DGSV WS+
Sbjct: 472 DGSVRVWSL 480
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 149 (57.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F D+ G + +DFH + V+A DD +I+++ + CL T+ V V F
Sbjct: 49 FEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELP 108
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+I +S D+++R+ + + K + GH+ V+ + D +S SLD T+ +WD
Sbjct: 109 WIISASD---DQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWD 165
Score = 117 (46.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVC 83
M++ F + R + FH S +++ A +I+L+D T L + V +
Sbjct: 1 MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLD 60
Query: 84 FTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR 143
F HPT I+ S G D ++++ SL NK L GH D V ++ IS S D+
Sbjct: 61 F--HPTQPIFVSA-GDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQ 117
Query: 144 TVLLWDQRAEK 154
T+ +W+ + K
Sbjct: 118 TIRIWNWQNRK 128
Score = 56 (24.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 22/101 (21%), Positives = 42/101 (41%)
Query: 226 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK- 284
M ++LD G + + ++ +R ASF P ++SGS D V W + + K
Sbjct: 185 MSAQQNLLDGSLGDCVVKFILEGHTRGVNW-ASFHPTLPLIVSGSDDRQVKLWRMSATKA 243
Query: 285 -EVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSK 324
EV + + + P + ++ + + + DL K
Sbjct: 244 WEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDK 284
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 65/298 (21%), Positives = 119/298 (39%)
Query: 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA---TCLKTINSKKYGVDLVCFTSHP 88
++ I + F +L T + ++ +++V T L+ +SK+ G V +
Sbjct: 297 EHTSVICYVRFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKREGDLYVRSVAFS 355
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
Y + D+ +R+ + + R GH + SL +SGS DRTV LW
Sbjct: 356 PDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLW 415
Query: 149 DQRAEKCQGLLRVQ-GRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
D A + + +L G + G + A + IR++ + G + + G
Sbjct: 416 DVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTS----SGTL-VEQLHGHE 470
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHV--LDSFRGTLLSTYNVKPVSRNS-------TLEA 257
V FS DG+ ++ +++ I + L S Y + + + L
Sbjct: 471 ESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSV 530
Query: 258 SFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSEL 315
+ SP+G ++ISGS D ++ WS S + + + +P F TGS +L
Sbjct: 531 TVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDL 588
>TAIR|locus:2051094 [details] [associations]
symbol:MAC3B "MOS4-associated complex 3B" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0042742 GO:GO:0006281 eggNOG:COG2319 GO:GO:0006397
GO:GO:0045087 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AC002332 GO:GO:0080008 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:FJ820118 EMBL:AY080868 IPI:IPI00529157
PIR:C84744 RefSeq:NP_850206.4 RefSeq:NP_850207.4 UniGene:At.44022
ProteinModelPortal:O22785 SMR:O22785 IntAct:O22785 STRING:O22785
PaxDb:O22785 PRIDE:O22785 EnsemblPlants:AT2G33340.1
EnsemblPlants:AT2G33340.2 GeneID:817897 KEGG:ath:AT2G33340
GeneFarm:2867 TAIR:At2g33340 InParanoid:O22785 OMA:QWQELKV
PhylomeDB:O22785 Genevestigator:O22785 Uniprot:O22785
Length = 525
Score = 154 (59.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 45/211 (21%), Positives = 95/211 (45%)
Query: 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS 86
G + D++ + ++ H ++ Y V+AS D + YD+++ +CL ++ VD
Sbjct: 302 GYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAF 361
Query: 87 HPTTVIYSSKNGWDESL-RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTV 145
HP +I + G +S+ ++ + + F GH V ++S S F++ + + V
Sbjct: 362 HPDGLILGT--GTSQSVVKIWDVKSQANVAKFDGHTGEVTAISF-SENGYFLATAAEDGV 418
Query: 146 LLWDQRA-EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG 204
LWD R + L + +D G +A I+++ K +++
Sbjct: 419 RLWDLRKLRNFKSFLSADAN-SVEFDPSGSYLGIAASD-IKVYQTASV-KAEWNLIKTLP 475
Query: 205 DISD---ANVVKFSNDGRLMLLTTMEGHIHV 232
D+S A VKF +D + + + +M+ ++ +
Sbjct: 476 DLSGTGKATCVKFGSDAQYVAVGSMDRNLRI 506
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 151 (58.2 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 56/234 (23%), Positives = 99/234 (42%)
Query: 10 DKVSLELSEEILQ---SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA 66
DK S ++ E I+ + E+ + + ++G + F +YL++ S+D ++RL+ +
Sbjct: 497 DKESDDVLERIMDEKTASELKILY-GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTF 555
Query: 67 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS 126
TCL Y V F+ + Y G D RL + + LR F GH V
Sbjct: 556 TCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTC 612
Query: 127 LSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAV-AFGGY 183
+ + +GS DRTV LWD C + P + A+ G A A G
Sbjct: 613 TRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGR 672
Query: 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237
+ ++D G + + G ++FS DG ++ +M+ + + D+ +
Sbjct: 673 VLLWDIGH---GLM-VGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVK 722
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 45/190 (23%), Positives = 79/190 (41%)
Query: 100 DESL-RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 158
D+ L R++ L+ GH V S ++ +S S D TV LW + C L
Sbjct: 501 DDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTC--L 558
Query: 159 LRVQGRPAAAYDDQGLVFAVAF--GGY---IRMFDARKYEKGPFDIFSVGGDISDANVVK 213
+ +G +D Q + F GG+ R++ Y+ P IF+ G ++D +
Sbjct: 559 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ--PLRIFA--GHLADVTCTR 614
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
F + + + + + + D G + + +S +FSP G F+ +G+ DG
Sbjct: 615 FHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL---AFSPNGRFLATGATDG 671
Query: 274 SVYAWSVRSG 283
V W + G
Sbjct: 672 RVLLWDIGHG 681
Score = 48 (22.0 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 224 TTMEGHIHVLDSFRGTLLSTYNVK 247
TT GHI++ ++ + LL TY K
Sbjct: 733 TTATGHINLPENSQDLLLGTYMTK 756
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 152 (58.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 62/278 (22%), Positives = 117/278 (42%)
Query: 48 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107
Y+ ++S D S+R++D TA C + + V C ++YS+ D ++++
Sbjct: 169 YMASSSKDGSVRVWDTTAGRCERILTGHTQSV--TCLRWGGDGLLYSASQ--DRTIKVWR 224
Query: 108 LHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-VQGRPA 166
HD R +GH V +++L S+ +G+ + A+ QG L+ ++ R
Sbjct: 225 AHDGVLCRTLQGHGHWVNTMAL-STDYALRTGAFEPAEA--SINAQDLQGSLQELKDRAL 281
Query: 167 AAYD---DQGLVFAVAFGGYIRMFDARKYE-KGPFDIFSVGGDISDANVVKFSNDGRLML 222
Y+ QG V+ +F E K P + + G + N V FS D R++
Sbjct: 282 RRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKP--LARMTGHQALINQVLFSPDSRIIA 339
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ + I + D G L++ + + ++S + ++SGS D ++ W V++
Sbjct: 340 SASFDKSIKLWDGRTGKYLASLRGHVAA---VYQIAWSADSRLLVSGSSDSTLKVWDVKA 396
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
K A E + W+P +G + L W
Sbjct: 397 QKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 132 (51.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 68/312 (21%), Positives = 131/312 (41%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
S ++ + S+ F + YL + S D ++R +D++ T T ++ V + ++
Sbjct: 60 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 119
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLS---LCSSKDC--FISGSLD 142
T+ KNG + L K + R GH + LS L ++ +C S S D
Sbjct: 120 KTLASGCKNG---QILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKD 176
Query: 143 RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIF 200
+V +WD A +C+ +L Q + GL+++ + I+++ A G
Sbjct: 177 GSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHD---GVL-CR 232
Query: 201 SVGGDISDANVVKFSNDGRLML--LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 258
++ G N + S D L E I+ D +G+L + + + R + +
Sbjct: 233 TLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQD-LQGSLQELKD-RALRRYNLVRGQ 290
Query: 259 FSPEGMFVISGSGDGSVYAWSVRSGKE-VASWMSFDTEPPVIKWTPGSLMFVTGSSELSF 317
PE + +SGS D +++ WS K+ +A + ++P S + + S + S
Sbjct: 291 -GPERL--VSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSI 347
Query: 318 WIPDLSKLGAYV 329
+ D + G Y+
Sbjct: 348 KLWD-GRTGKYL 358
>MGI|MGI:1920933 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920933 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031
eggNOG:COG2319 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000112569 HOVERGEN:HBG050534
InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914 CTD:89849
OrthoDB:EOG44F68R EMBL:AK131109 EMBL:AC107638 EMBL:BC060054
IPI:IPI00755633 IPI:IPI00895049 RefSeq:NP_001104581.1
UniGene:Mm.275744 ProteinModelPortal:Q6KAU8 SMR:Q6KAU8
PhosphoSite:Q6KAU8 PRIDE:Q6KAU8 Ensembl:ENSMUST00000120267
Ensembl:ENSMUST00000139609 Ensembl:ENSMUST00000143630 GeneID:73683
KEGG:mmu:73683 UCSC:uc009iof.2 InParanoid:Q6KAU8 OMA:QGPHCTA
NextBio:338795 Bgee:Q6KAU8 Genevestigator:Q6KAU8 Uniprot:Q6KAU8
Length = 623
Score = 154 (59.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 61/288 (21%), Positives = 123/288 (42%)
Query: 3 GSQSEREDKVSLELSEEI-LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLY 61
G+ +R + + +S +I Q+ +V + ++++ F +SS L T D I L+
Sbjct: 311 GAPEQRYQSIPVCVSAQIPSQAQDV---LDAHLSEVNAVCFGPNSSLLATGGADRLIHLW 367
Query: 62 DVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG 119
+V +T+ + V F + V+ ++ N ++ +L + + + G
Sbjct: 368 NVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYN---QAAQLWKVGETQSKETLSG 424
Query: 120 HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVA 179
H D+V + ++ ++GS DRTV WD C + V ++ +
Sbjct: 425 HKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHIIISGH 484
Query: 180 FGGYIRMFDARKYEKGP--FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237
IR +D+R GP + V G ++ ++ S D +L + + + V+D
Sbjct: 485 NDQKIRFWDSR----GPHCIQVIPVQGRVTSLHL---SYDQLHLLSCSRDNTLKVIDLRI 537
Query: 238 GTLLSTYNVKPVSRNST-LEASFSPEGMFVISGSGDGSVYAWSVRSGK 284
+ + +S +A FSP+ + ++GS +G +Y W V +GK
Sbjct: 538 SNIRQVFRADGFKCSSDWTKAVFSPDRSYALAGSSNGDLYIWDVNTGK 585
>TAIR|locus:2089179 [details] [associations]
symbol:AT3G27640 "AT3G27640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 KO:K11790 EMBL:AY035167 EMBL:AY063003 IPI:IPI00539568
RefSeq:NP_566822.1 UniGene:At.19178 ProteinModelPortal:Q94C55
SMR:Q94C55 PRIDE:Q94C55 EnsemblPlants:AT3G27640.1 GeneID:822386
KEGG:ath:AT3G27640 TAIR:At3g27640 InParanoid:Q94C55 OMA:NRIYLYN
PhylomeDB:Q94C55 ProtClustDB:CLSN2688846 ArrayExpress:Q94C55
Genevestigator:Q94C55 Uniprot:Q94C55
Length = 535
Score = 109 (43.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 32/123 (26%), Positives = 53/123 (43%)
Query: 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252
EK I S+ D S + D R+ L T+ + SF G + ++ V+ +
Sbjct: 289 EKRSHGIVSLSQDSSGTYLTASCKDNRIYLYNTLRLDKGPVQSFSGCRIDSFFVRTM--- 345
Query: 253 STLEASFSPEGMFVISGSGDGSVYAWSVRSGK-EVASWMSFDTEPPVIKWTPGSLMFVTG 311
SP+G +V+SGS DG+ Y W V + + D E + W+P + V
Sbjct: 346 ------ISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVAT 399
Query: 312 SSE 314
+S+
Sbjct: 400 ASD 402
Score = 89 (36.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 31/144 (21%), Positives = 60/144 (41%)
Query: 22 QSMEVGMSFRDYNG-RISSMDFHKSSSYLV-----TASDDESIRLYDVTAATCLKTINSK 75
+S+ V + R+ NG R+ F S + A + + I + + C + NS+
Sbjct: 26 RSVFVNIGLRELNGFRVRKRPFFADSELICREIAGVAVEHDGIWTPPLAVSFCKTSRNSQ 85
Query: 76 KYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDC 135
+ V H + SSK + + ++ R + H++ + +S C
Sbjct: 86 LFAVSDE--DGHVSLFNSSSKKFASSATHQENTEKARF-RDWIAHYNAIFDISWIKGDSC 142
Query: 136 FISGSLDRTVLLWDQRAEKCQGLL 159
++ S D+T+ +WD KC G+L
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVL 166
Score = 72 (30.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 100 DESLRLLSLHDNKYLRYFKGHHDRVVSL-SLCSSKDCFISGSLDRTVLLWDQRAE 153
D+++++ + +NK GH V S+ S ++ D +SGS D LWD R +
Sbjct: 149 DQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLRCK 203
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 150 (57.9 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F Y G IS + + S YL +ASDD++IR++D ++ + V + F T
Sbjct: 93 FGHYRG-ISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGT 151
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
++ S WDE++R+ +L D LR H + ++S+S+ + + S D +WD
Sbjct: 152 LLVSGS---WDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWD 208
Query: 150 QRAEKC 155
+ +C
Sbjct: 209 VLSGQC 214
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 149 (57.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 57/202 (28%), Positives = 88/202 (43%)
Query: 83 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK--DCFISGS 140
CFT+ ++ SS +G + L + + L+ F GH V+ L L S+ + F+SG
Sbjct: 162 CFTNSDMQILTSSGDG---TCALWDVESGQMLQSFHGHAADVLCLDLAPSETGNTFVSGG 218
Query: 141 LDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFG-GYIRMFDARKYEKGPF 197
D+ +WD R +C + Y G FA R++D R +
Sbjct: 219 CDKKACVWDMRTGQCVQSFESHDSDINSVRYYPSGDAFASGSDDATCRLYDLRADRE--V 276
Query: 198 DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 257
I+S I A+ V FS GRL+ + I+V D +G +S +R STL
Sbjct: 277 AIYSKESIIFGASSVDFSLSGRLLFGGYNDYTINVWDVLKGARVSIL-FGHENRVSTLRV 335
Query: 258 SFSPEGMFVISGSGDGSVYAWS 279
S P+G SGS D ++ W+
Sbjct: 336 S--PDGTAFCSGSWDHTLRIWA 355
Score = 135 (52.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 55/229 (24%), Positives = 95/229 (41%)
Query: 101 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR 160
E + L K R KGH ++V+ + C K +S S D V++WD + +
Sbjct: 45 EKIEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDAFTTNKEHAVT 104
Query: 161 VQGR--PAAAYDDQGLVFAVAFGGY-----IRMFDARKYEKGPFDIFSVGGDISDANVVK 213
+ A AY G AVA GG + K E SV + +
Sbjct: 105 MPCTWVMACAYAPSGC--AVACGGLDNKCSVYPLSLDKNENLAAKKKSVAMHTNYLSACC 162
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
F+N +L ++ +G + D G +L +++ L+ + S G +SG D
Sbjct: 163 FTNSDMQILTSSGDGTCALWDVESGQMLQSFHGHAADV-LCLDLAPSETGNTFVSGGCDK 221
Query: 274 SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
W +R+G+ V S+ S D++ +++ P F +GS + + + DL
Sbjct: 222 KACVWDMRTGQCVQSFESHDSDINSVRYYPSGDAFASGSDDATCRLYDL 270
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 42/174 (24%), Positives = 78/174 (44%)
Query: 12 VSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT 71
+SL+ +E + + +Y +S+ F S ++T+S D + L+DV + L++
Sbjct: 136 LSLDKNENLAAKKKSVAMHTNY---LSACCFTNSDMQILTSSGDGTCALWDVESGQMLQS 192
Query: 72 INSKKYGVDLVCFTSHPT-TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLC 130
+ + D++C P+ T G D+ + + + ++ F+ H + S+
Sbjct: 193 FHG--HAADVLCLDLAPSETGNTFVSGGCDKKACVWDMRTGQCVQSFESHDSDINSVRYY 250
Query: 131 SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYD-DQGLVFAVAFGGY 183
S D F SGS D T L+D RA++ + + A D L + FGGY
Sbjct: 251 PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFGGY 304
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 151 (58.2 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 65/307 (21%), Positives = 132/307 (42%)
Query: 24 MEVGMSFRDYNGRISSMDF---HKSSS--YLVTASDDESIRLYDVTAATCLKTINSKKYG 78
++VG + ++ I+ + + H + Y+ ++S D S+R++D TA C + +
Sbjct: 189 LQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQS 248
Query: 79 VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFIS 138
V C ++YS+ D ++++ HD R +GH V +++L S+ +
Sbjct: 249 V--TCLRWGGDGLLYSASQ--DRTIKVWRAHDGVLCRTLQGHGHWVNTMAL-STDYALRT 303
Query: 139 GSLDRTVLLWDQRAEKCQGLLR-VQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYE- 193
G+ + + A+ QG L+ ++ R ++ Y+ QG V+ +F E
Sbjct: 304 GAFEPAEATVN--AQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAED 361
Query: 194 KGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNS 253
K P + + G + N V FS D R++ + + I + D G L++ +
Sbjct: 362 KKP--LARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAA--- 416
Query: 254 TLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS 313
+ ++S + ++SGS D ++ W V++ K E + W+P +G
Sbjct: 417 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGK 476
Query: 314 E--LSFW 318
+ L W
Sbjct: 477 DKCLRIW 483
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 69/315 (21%), Positives = 131/315 (41%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
S ++ + S+ F + YL + S D ++R +D++ T T ++ V + ++
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 89 TTVIYSSKNG----WDESLRLLSLHDNKYLRYFKGHHDRVVSLS---LCSSKDC-FI-SG 139
+ KNG WD S L + R GH + LS L + +C ++ S
Sbjct: 169 KKLASGCKNGQVLLWDPSTGL------QVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 222
Query: 140 SLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPF 197
S D +V +WD A +C+ +L Q + GL+++ + I+++ A G
Sbjct: 223 SKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHD---GVL 279
Query: 198 DIFSVGGDISDANVVKFSNDGRLML--LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255
++ G N + S D L E ++ D +G+L + SR + +
Sbjct: 280 -CRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQD-LQGSL-KELKERASSRYNLV 336
Query: 256 EASFSPEGMFVISGSGDGSVYAWSVRSGKE-VASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
PE + +SGS D +++ WS K+ +A + ++P S + + S +
Sbjct: 337 RGQ-GPERL--VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFD 393
Query: 315 LSFWIPDLSKLGAYV 329
S + D + G Y+
Sbjct: 394 KSIKLWD-GRTGKYL 407
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 151 (58.2 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 61/278 (21%), Positives = 119/278 (42%)
Query: 48 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107
Y+ ++S D S+R++D TA C + + V C ++YS+ D ++++
Sbjct: 218 YVASSSKDGSVRVWDTTAGRCERILTGHTQSV--TCLRWGGDGLLYSASQ--DRTIKVWR 273
Query: 108 LHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-VQGRPA 166
HD R +GH V +++L S+ +G+ + A+ +G L+ ++ R
Sbjct: 274 AHDGVLCRTLQGHGHWVNTMAL-STDYALRTGAFEPAEA--SVNAQDLRGSLQELKERAL 330
Query: 167 AAYD---DQGLVFAVAFGGYIRMFDARKYE-KGPFDIFSVGGDISDANVVKFSNDGRLML 222
+ Y+ +GL V+ +F E K P + + G + N V FS D R++
Sbjct: 331 SRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKP--LARMTGHQALINQVLFSPDSRIIA 388
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ + I + D G L++ + + ++S + ++SGS D ++ W V++
Sbjct: 389 SASFDKSIKLWDGRTGKYLASLRGHVAA---VYQIAWSADSRLLVSGSSDSTLKVWDVKA 445
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
K A E + W+P +G + L W
Sbjct: 446 QKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 124 (48.7 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 67/313 (21%), Positives = 133/313 (42%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
S ++ + S+ F + YL + S D ++R +D++ T T ++ V + ++
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 168
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLS---LCSSKDC-FI-SGSLD 142
+ KNG + L K + R GH + +LS L ++ +C ++ S S D
Sbjct: 169 KKLASGCKNG---QILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKD 225
Query: 143 RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIF 200
+V +WD A +C+ +L Q + GL+++ + I+++ A G
Sbjct: 226 GSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHD---GVL-CR 281
Query: 201 SVGGDISDANVVKFSNDGRLML--LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 258
++ G N + S D L E ++ D RG+L + +SR + +
Sbjct: 282 TLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQD-LRGSL-QELKERALSRYNLVRG- 338
Query: 259 FSPEGMF-VISGSGDGSVYAWSVRSGKE-VASWMSFDTEPPVIKWTPGSLMFVTGSSELS 316
G+ ++SGS D +++ WS K+ +A + ++P S + + S + S
Sbjct: 339 ---RGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKS 395
Query: 317 FWIPDLSKLGAYV 329
+ D + G Y+
Sbjct: 396 IKLWD-GRTGKYL 407
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 37/138 (26%), Positives = 64/138 (46%)
Query: 21 LQSMEVGMSFRDYNGRISSMD---FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY 77
L S + R Y G ++ +D FH +S+YL T S D+++RL+ ++ +
Sbjct: 406 LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRG 465
Query: 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI 137
V + F+ + Y + G D+ L+L L + +GH D + SL+
Sbjct: 466 PVLSLAFSPNGK---YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVA 522
Query: 138 SGSLDRTVLLWDQRAEKC 155
S S+D +V +WD R+ C
Sbjct: 523 SASMDNSVRVWDIRSSHC 540
Score = 117 (46.2 bits), Expect = 0.00065, P = 0.00065
Identities = 55/217 (25%), Positives = 91/217 (41%)
Query: 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTT 90
R + G + S F SS L++ S+D SIR +D+ + T Y V + + H
Sbjct: 335 RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHS-- 392
Query: 91 VIYSSKNGWDESLRLLSLHDNKY-LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+Y + D + RL S D Y LR + GH V + + + +GS D+TV LW
Sbjct: 393 -LYFASASHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 450
Query: 150 QRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFS-VGGDI 206
+ L P + A+ G A A G R+ + ++ ++ + G
Sbjct: 451 TQQGNSVRLFTGHRGPVLSLAFSPNGKYLASA-GEDQRL---KLWDLASGTLYKELRGHT 506
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLST 243
+ + FS D L+ +M+ + V D R + ST
Sbjct: 507 DNITSLTFSPDSSLVASASMDNSVRVWD-IRSSHCST 542
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 148 (57.2 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 55/201 (27%), Positives = 90/201 (44%)
Query: 84 FTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK--DCFISGSL 141
FT+ ++ +S +G + L + + L+ F GH V+ L L S+ + F+SG
Sbjct: 161 FTNSDMQILTASGDG---TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 217
Query: 142 DRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFG-GYIRMFDARKYEKGPFD 198
D+ ++WD R+ +C + Y G FA R++D R +
Sbjct: 218 DKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE--VA 275
Query: 199 IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 258
I+S I A+ V FS GRL+ + I+V D +G+ +S +R STL S
Sbjct: 276 IYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL-FGHENRVSTLRVS 334
Query: 259 FSPEGMFVISGSGDGSVYAWS 279
P+G SGS D ++ W+
Sbjct: 335 --PDGTAFCSGSWDHTLRVWA 353
Score = 135 (52.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 54/220 (24%), Positives = 93/220 (42%)
Query: 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAY 169
K R KGH ++V+ + C K +S S D V++WD + + + A AY
Sbjct: 54 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 113
Query: 170 DDQGLVFAVAFGG-------YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLML 222
G A+A GG Y FD K E SV + + F+N +L
Sbjct: 114 APSGC--AIACGGLDNKCSVYPLTFD--KNENMAAKKKSVAMHTNYLSACSFTNSDMQIL 169
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ +G + D G LL +++ L+ + S G +SG D W +RS
Sbjct: 170 TASGDGTCALWDVESGQLLQSFHGHGADV-LCLDLAPSETGNTFVSGGCDKKAMVWDMRS 228
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
G+ V ++ + +++ +++ P F +GS + + + DL
Sbjct: 229 GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDL 268
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT-TVIYSS 95
+S+ F S ++TAS D + L+DV + L++ + +G D++C P+ T
Sbjct: 156 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSETGNTFV 213
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
G D+ + + + ++ F+ H V S+ S D F SGS D T L+D RA++
Sbjct: 214 SGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR 272
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 148 (57.2 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 55/201 (27%), Positives = 90/201 (44%)
Query: 84 FTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK--DCFISGSL 141
FT+ ++ +S +G + L + + L+ F GH V+ L L S+ + F+SG
Sbjct: 161 FTNSDMQILTASGDG---TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 217
Query: 142 DRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFG-GYIRMFDARKYEKGPFD 198
D+ ++WD R+ +C + Y G FA R++D R +
Sbjct: 218 DKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADRE--VA 275
Query: 199 IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 258
I+S I A+ V FS GRL+ + I+V D +G+ +S +R STL S
Sbjct: 276 IYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL-FGHENRVSTLRVS 334
Query: 259 FSPEGMFVISGSGDGSVYAWS 279
P+G SGS D ++ W+
Sbjct: 335 --PDGTAFCSGSWDHTLRVWA 353
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 54/220 (24%), Positives = 93/220 (42%)
Query: 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAY 169
K R KGH ++V+ + C K +S S D V++WD + + + A AY
Sbjct: 54 KTRRTLKGHGNKVLCMDWCKDKRRLVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 113
Query: 170 DDQGLVFAVAFGG-------YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLML 222
G A+A GG Y FD K E SV + + F+N +L
Sbjct: 114 APSGC--AIACGGLDNKCSVYPLTFD--KNENMAAKKKSVAMHTNYLSACSFTNSDMQIL 169
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ +G + D G LL +++ L+ + S G +SG D W +RS
Sbjct: 170 TASGDGTCALWDVESGQLLQSFHGHGADV-LCLDLAPSETGNTFVSGGCDKKAMVWDMRS 228
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
G+ V ++ + +++ +++ P F +GS + + + DL
Sbjct: 229 GQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDL 268
Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT-TVIYSS 95
+S+ F S ++TAS D + L+DV + L++ + +G D++C P+ T
Sbjct: 156 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSETGNTFV 213
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
G D+ + + + ++ F+ H + S+ S D F SGS D T L+D RA++
Sbjct: 214 SGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADR 272
>FB|FBgn0033440 [details] [associations]
symbol:CG10459 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=ISS] [GO:0005102 "receptor binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00630000089849 RefSeq:NP_610513.2 UniGene:Dm.28171
ProteinModelPortal:A1Z7Y4 SMR:A1Z7Y4 PRIDE:A1Z7Y4
EnsemblMetazoa:FBtr0088468 GeneID:36000 KEGG:dme:Dmel_CG10459
UCSC:CG10459-RA FlyBase:FBgn0033440 InParanoid:A1Z7Y4 OMA:VEHEVEN
OrthoDB:EOG4QBZMX PhylomeDB:A1Z7Y4 GenomeRNAi:36000 NextBio:796270
Bgee:A1Z7Y4 Uniprot:A1Z7Y4
Length = 322
Score = 147 (56.8 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 60/259 (23%), Positives = 105/259 (40%)
Query: 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP-T 89
R + + S+ + L + D +R++D LK + K + C +P
Sbjct: 55 RKHTDSVWSVSLSHDAKILASGGADCKVRVWDALLGKQLKKLRHTK---TVACVDLNPKA 111
Query: 90 TVIYSSKNGWDESLRLLSLHDNKY--LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
T + + + L L + ++ L F+GH V + C + CF+S S DRTV +
Sbjct: 112 TRLLTGCIDQESPLALFDMEQSEKAPLMEFRGHSRGVRDVIFCLEEHCFLSSSYDRTVRM 171
Query: 148 WDQRA-EKCQGLLRVQGRPAAAYDDQGLVFAVAF-GGYI----RMFDARKYEKGPFDIFS 201
WD R + + + G + +A+ GG I + F+ K+ K P+ + +
Sbjct: 172 WDCRTGTRTNSIFLPHHVKSLELHHSGDIVTIAYAGGVIFLDPKSFEVLKHRKLPYKVTA 231
Query: 202 VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP 261
+ V +N G + + D RG +S +P ++ L SFSP
Sbjct: 232 ASLSPNKGIYVCGNNMGYSFK------YDYDTDVDRGLYVSQ---EP---SAVLALSFSP 279
Query: 262 EGMFVISGSGDGSVYAWSV 280
+G GS DGS+ W +
Sbjct: 280 DGEVCAIGSQDGSIILWQM 298
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 61/278 (21%), Positives = 119/278 (42%)
Query: 48 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107
Y+ ++S D S+R++D TA C + + V C ++YS+ D ++++
Sbjct: 220 YVASSSKDGSVRVWDTTAGRCERILTGHTQSV--TCLRWGGDGLLYSASQ--DRTIKVWR 275
Query: 108 LHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-VQGRPA 166
HD R +GH V +++L S+ +G+ + + A+ QG L+ ++ R +
Sbjct: 276 AHDGVLCRTLQGHGHWVNTMAL-STDYALRTGAFEPAEATVN--AQDLQGSLKELKERAS 332
Query: 167 AAYD---DQGLVFAVAFGGYIRMFDARKYE-KGPFDIFSVGGDISDANVVKFSNDGRLML 222
+ Y+ QG V+ +F E K P + + G + N V FS D R++
Sbjct: 333 SRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP--LARMTGHQALINQVLFSPDSRIVA 390
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ + I + D G L++ + + ++S + ++SGS D ++ W V++
Sbjct: 391 SASFDKSIKLWDGRTGKYLASLRGHVAA---VYQIAWSADSRLLVSGSSDSTLKVWDVKA 447
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
K E + W+P +G + L W
Sbjct: 448 QKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 68/315 (21%), Positives = 130/315 (41%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
S ++ + S+ F + YL + S D ++R +D++ T T ++ V + ++
Sbjct: 111 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 170
Query: 89 TTVIYSSKNG----WDESLRLLSLHDNKYLRYFKGHHDRVVSLS---LCSSKDC-FI-SG 139
+ KNG WD S + R GH + LS L + +C ++ S
Sbjct: 171 KKLASGCKNGQILLWDPST------GTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 224
Query: 140 SLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPF 197
S D +V +WD A +C+ +L Q + GL+++ + I+++ A G
Sbjct: 225 SKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHD---GVL 281
Query: 198 DIFSVGGDISDANVVKFSNDGRLML--LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255
++ G N + S D L E ++ D +G+L + SR + +
Sbjct: 282 -CRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQD-LQGSL-KELKERASSRYNLV 338
Query: 256 EASFSPEGMFVISGSGDGSVYAWSVRSGKE-VASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
PE + +SGS D +++ WS K+ +A + ++P S + + S +
Sbjct: 339 RGQ-GPERL--VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFD 395
Query: 315 LSFWIPDLSKLGAYV 329
S + D + G Y+
Sbjct: 396 KSIKLWD-GRTGKYL 409
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 153 (58.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 68/275 (24%), Positives = 114/275 (41%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
++ R++S+D ++ LVT +D ++ L+ + C ++ +D V F ++ +
Sbjct: 17 HDSRVTSLDLGETGRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSIDCVRF-AYKDNFV 75
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD-QR 151
YS+ + +R L+ K GH +L S + +SGS D TV LWD Q
Sbjct: 76 YSADD--IGIIRRWDLNSQKIYSTLNGHMKSGRTLDFNPSGEYVVSGSNDTTVRLWDVQN 133
Query: 152 AEKCQGLLR--VQGRPAAAYDDQGLVFAVA-FGGYIRMFDARKYEKGPFDIFSVGGDISD 208
C + R + + + GL A A G I ++D RK K + F ++
Sbjct: 134 ENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRK-SKQIME-FIADPPVTA 191
Query: 209 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS--TYNVKPVSRNSTLEASFSPEGMFV 266
V+F L+ ++G + + D L+S T+ R T FS G +
Sbjct: 192 ITCVQFHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCIT----FSDNGECL 247
Query: 267 ISGSGDG-SVYAWSV-RSGKEVASWMSFDTEPPVI 299
GS G SV W R + S SF + V+
Sbjct: 248 FVGSSSGISVIGWEPDRELDHIKSTWSFLADMKVV 282
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 53/218 (24%), Positives = 91/218 (41%)
Query: 118 KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAA----AYDDQG 173
K H RV SL L + ++G DR V LW +C L R AY D
Sbjct: 15 KAHDSRVTSLDLGETGRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSIDCVRFAYKDN- 73
Query: 174 LVFAVAFGGYIRMFDARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTMEGHIHV 232
V++ G IR +D + I+S + G + + F+ G ++ + + + +
Sbjct: 74 FVYSADDIGIIRRWDLNSQK-----IYSTLNGHMKSGRTLDFNPSGEYVVSGSNDTTVRL 128
Query: 233 LDSFRGTLLSTYNVKPVSRNSTLEAS---FSPEGMFVISGSGDGSVYAWSVRSGKEVASW 289
D + + N V R + FSP+G+++ S +GS+ W +R K++
Sbjct: 129 WD-----VQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQI--- 180
Query: 290 MSFDTEPPV-----IKWTPGSLMFVTGSSELSFWIPDL 322
M F +PPV +++ P + G + + I DL
Sbjct: 181 MEFIADPPVTAITCVQFHPFEFLLAAGRVDGTVSIYDL 218
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 55/201 (27%), Positives = 90/201 (44%)
Query: 84 FTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK--DCFISGSL 141
FT+ ++ +S +G + L + + L+ F GH V+ L L S+ + F+SG
Sbjct: 203 FTNSDMQILTASGDG---TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 259
Query: 142 DRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFG-GYIRMFDARKYEKGPFD 198
D+ ++WD R+ +C + Y G FA R++D R +
Sbjct: 260 DKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE--VA 317
Query: 199 IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 258
I+S I A+ V FS GRL+ + I+V D +G+ +S +R STL S
Sbjct: 318 IYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL-FGHENRVSTLRVS 376
Query: 259 FSPEGMFVISGSGDGSVYAWS 279
P+G SGS D ++ W+
Sbjct: 377 --PDGTAFCSGSWDHTLRVWA 395
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 54/220 (24%), Positives = 93/220 (42%)
Query: 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAY 169
K R KGH ++V+ + C K +S S D V++WD + + + A AY
Sbjct: 96 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 155
Query: 170 DDQGLVFAVAFGG-------YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLML 222
G A+A GG Y FD K E SV + + F+N +L
Sbjct: 156 APSGC--AIACGGLDNKCSVYPLTFD--KNENMAAKKKSVAMHTNYLSACSFTNSDMQIL 211
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ +G + D G LL +++ L+ + S G +SG D W +RS
Sbjct: 212 TASGDGTCALWDVESGQLLQSFHGHGADV-LCLDLAPSETGNTFVSGGCDKKAMVWDMRS 270
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
G+ V ++ + +++ +++ P F +GS + + + DL
Sbjct: 271 GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDL 310
Score = 126 (49.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT-TVIYSS 95
+S+ F S ++TAS D + L+DV + L++ + +G D++C P+ T
Sbjct: 198 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSETGNTFV 255
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
G D+ + + + ++ F+ H V S+ S D F SGS D T L+D RA++
Sbjct: 256 SGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR 314
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 55/201 (27%), Positives = 90/201 (44%)
Query: 84 FTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK--DCFISGSL 141
FT+ ++ +S +G + L + + L+ F GH V+ L L S+ + F+SG
Sbjct: 203 FTNSDMQILTASGDG---TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 259
Query: 142 DRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFG-GYIRMFDARKYEKGPFD 198
D+ ++WD R+ +C + Y G FA R++D R +
Sbjct: 260 DKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADRE--VA 317
Query: 199 IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 258
I+S I A+ V FS GRL+ + I+V D +G+ +S +R STL S
Sbjct: 318 IYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL-FGHENRVSTLRVS 376
Query: 259 FSPEGMFVISGSGDGSVYAWS 279
P+G SGS D ++ W+
Sbjct: 377 --PDGTAFCSGSWDHTLRVWA 395
Score = 134 (52.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 54/220 (24%), Positives = 93/220 (42%)
Query: 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAY 169
K R KGH ++V+ + C K +S S D V++WD + + + A AY
Sbjct: 96 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 155
Query: 170 DDQGLVFAVAFGG-------YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLML 222
G A+A GG Y FD K E SV + + F+N +L
Sbjct: 156 APSGC--AIACGGLDNKCSVYPLTFD--KNENMAAKKKSVAMHTNYLSACSFTNSDMQIL 211
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ +G + D G LL +++ L+ + S G +SG D W +RS
Sbjct: 212 TASGDGTCALWDVESGQLLQSFHGHGADV-LCLDLAPSETGNTFVSGGCDKKAMVWDMRS 270
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
G+ V ++ + +++ +++ P F +GS + + + DL
Sbjct: 271 GQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDL 310
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT-TVIYSS 95
+S+ F S ++TAS D + L+DV + L++ + +G D++C P+ T
Sbjct: 198 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSETGNTFV 255
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
G D+ + + + ++ F+ H + S+ S D F SGS D T L+D RA++
Sbjct: 256 SGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADR 314
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 55/201 (27%), Positives = 89/201 (44%)
Query: 84 FTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK--DCFISGSL 141
FT+ ++ +S +G + L + + L+ F GH V+ L L S+ + F+SG
Sbjct: 161 FTNSDMQILTASGDG---TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 217
Query: 142 DRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFG-GYIRMFDARKYEKGPFD 198
D+ ++WD R+ +C + Y G FA R++D R +
Sbjct: 218 DKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADRE--VA 275
Query: 199 IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 258
I+S I A+ V FS GRL+ + I+V D +G +S +R STL S
Sbjct: 276 IYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGARVSIL-FGHENRVSTLRVS 334
Query: 259 FSPEGMFVISGSGDGSVYAWS 279
P+G SGS D ++ W+
Sbjct: 335 --PDGTAFCSGSWDHTLRVWA 353
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 54/220 (24%), Positives = 93/220 (42%)
Query: 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAY 169
K R KGH ++V+ + C K +S S D V++WD + + + A AY
Sbjct: 54 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 113
Query: 170 DDQGLVFAVAFGG-------YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLML 222
G A+A GG Y FD K E SV + + F+N +L
Sbjct: 114 APSGC--AIACGGLDNKCSVYPLTFD--KNENMAAKKKSVAMHTNYLSACSFTNSDMQIL 169
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ +G + D G LL +++ L+ + S G +SG D W +RS
Sbjct: 170 TASGDGTCALWDVESGQLLQSFHGHGADV-LCLDLAPSETGNTFVSGGCDKKAMVWDMRS 228
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
G+ V ++ + +++ +++ P F +GS + + + DL
Sbjct: 229 GQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDL 268
Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT-TVIYSS 95
+S+ F S ++TAS D + L+DV + L++ + +G D++C P+ T
Sbjct: 156 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSETGNTFV 213
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
G D+ + + + ++ F+ H + S+ S D F SGS D T L+D RA++
Sbjct: 214 SGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADR 272
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 147 (56.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 39/155 (25%), Positives = 68/155 (43%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L+ ++ +F + S+++FH +L + S D ++R++D C++T G+
Sbjct: 87 LEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGIS 146
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
+ F+ V+ G D +++ L K L FK H + SL + +GS
Sbjct: 147 TIEFSPDGRWVV---SGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGS 203
Query: 141 LDRTVLLWDQRAEKCQGLLRVQ--GRPAAAYDDQG 173
DRTV WD + G R + G A A+ G
Sbjct: 204 ADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDG 238
Score = 132 (51.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 53/212 (25%), Positives = 96/212 (45%)
Query: 114 LRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYD 170
L+ F H V LS+ ++G D V LW L P + A++
Sbjct: 8 LQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFN 67
Query: 171 -DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGH 229
++ LV A A G I+++D + + + + G S+ + V+F G + + + +
Sbjct: 68 SEEVLVLAGASSGVIKLWDLEESKM----VRAFTGHRSNCSAVEFHPFGEFLASGSSDTN 123
Query: 230 IHVLDSFRGTLLSTYNVKPVSRN-STLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVAS 288
+ V D+ + + TY K +R ST+E FSP+G +V+SG D V W + +GK +
Sbjct: 124 LRVWDTRKKGCIQTY--KGHTRGISTIE--FSPDGRWVVSGGLDNVVKVWDLTAGKLLHE 179
Query: 289 WMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
+ + + + P + TGS++ + FW
Sbjct: 180 FKCHEGPIRSLDFHPLEFLLATGSADRTVKFW 211
Score = 128 (50.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 32/127 (25%), Positives = 58/127 (45%)
Query: 30 FRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
F ++G ++ + K +S L+T DD + L+ + T ++ VD V F S
Sbjct: 11 FVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEE 70
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
V+ + +G ++L L ++K +R F GH ++ + SGS D + +W
Sbjct: 71 VLVLAGASSG---VIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVW 127
Query: 149 DQRAEKC 155
D R + C
Sbjct: 128 DTRKKGC 134
Score = 51 (23.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 258 SFSPEGMFVISGSGDG-SVYAWS---VRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG-S 312
+F P+G + G DG VY+W R G ++ W + G + +
Sbjct: 233 AFHPDGQTLFCGLDDGLKVYSWEPVICRDGVDMG-WSTLGD----FCINEGKFIGCSYYR 287
Query: 313 SELSFWIPDLSKLGAY 328
+ + W+ D+S+L Y
Sbjct: 288 NSVGIWVSDISELEPY 303
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/138 (26%), Positives = 63/138 (45%)
Query: 21 LQSMEVGMSFRDYNGRISSMD---FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY 77
L S + R Y G ++ +D FH +S+YL T S D+++RL+ ++ +
Sbjct: 410 LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 469
Query: 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI 137
V + F+ + Y + G D+ L+L L + +GH D + SL+
Sbjct: 470 PVLSLAFSPNGK---YLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIA 526
Query: 138 SGSLDRTVLLWDQRAEKC 155
S S+D +V +WD R C
Sbjct: 527 SASMDNSVRVWDIRNTHC 544
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 60/231 (25%), Positives = 96/231 (41%)
Query: 16 LSEEILQSMEVGMSF---RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI 72
L EE + +VG R + G + S F SS L++ S+D SIR +D+ + T
Sbjct: 321 LEEEDDEDDDVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLY 380
Query: 73 NSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-LRYFKGHHDRVVSLSLCS 131
Y V V + + +Y + D + RL S D Y LR + GH V +
Sbjct: 381 QGHAYPVWDVDISPYS---LYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHP 436
Query: 132 SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFGGYIRMFDA 189
+ + +GS D+TV LW + L P + A+ G A A G R+
Sbjct: 437 NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASA-GEDQRL--- 492
Query: 190 RKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT 239
+ ++ +F + G + + FS D L+ +M+ + V D R T
Sbjct: 493 KLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD-IRNT 542
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 46/149 (30%), Positives = 73/149 (48%)
Query: 4 SQSERE-DKVSLELSEEIL--QSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRL 60
+ S RE DK S +++ +L +S EV S + G + F + L++ S+D +IRL
Sbjct: 417 ADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRL 476
Query: 61 YDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH 120
+ + +C+ T Y V V F H + S +D++ RL + N+ LR F GH
Sbjct: 477 WSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCS---YDKTARLWATDSNQALRVFVGH 533
Query: 121 HDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
V + + + +GS DRTV LWD
Sbjct: 534 LSDVDCVQFHPNSNYVATGSSDRTVRLWD 562
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 62/316 (19%), Positives = 122/316 (38%)
Query: 8 REDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT 67
RE L LS++ L S + G ++ + S+ L D S+R++ +T A
Sbjct: 352 REASKRLALSKDQLPSAVFYTVLNSHQG-VTCAEISDDSTMLACGFGDSSVRIWSLTPAK 410
Query: 68 CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSL 127
L+T+ +L K D ++R+L + R GH V
Sbjct: 411 -LRTLKDADSLREL-------------DKESADINVRMLDDRSGEVTRSLMGHTGPVYRC 456
Query: 128 SLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPA--AAYDDQGLVF-AVAFGGYI 184
+ + +S S D T+ LW C R P + G F + ++
Sbjct: 457 AFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTA 516
Query: 185 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244
R++ + +F G +SD + V+F + + + + + + D+ G +
Sbjct: 517 RLWATDSNQA--LRVFV--GHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTG---QSV 569
Query: 245 NVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWT-P 303
+ + S +FS G ++ SGS D ++ W + +G V + + + I ++
Sbjct: 570 RLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRD 629
Query: 304 GSLMFVTG-SSELSFW 318
G+++ G + L+ W
Sbjct: 630 GTVLAAAGLDNNLTLW 645
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 123 (48.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 30/124 (24%), Positives = 63/124 (50%)
Query: 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGV-DLVCFTSHPTT 90
+++G ++ + ++ Y ++ S D+SI+LY+V+ + + + YG+ DLV + +
Sbjct: 12 NHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHGYGIGDLVSTSDNKQ- 70
Query: 91 VIYSSKNGWDESLRLLSLHDNKYLRYFKG-HHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
++S ++ L + + +R F+ H+D + S+ + SGS DR V WD
Sbjct: 71 -LFSCA---EKQLYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGSSDRLVKAWD 126
Query: 150 QRAE 153
R +
Sbjct: 127 LRTK 130
Score = 112 (44.5 bits), Expect = 0.00093, P = 0.00093
Identities = 31/116 (26%), Positives = 51/116 (43%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV--CFTSHPTTVIYS 94
ISS+ K + + DE+++L D+ + LK K V + C + +I
Sbjct: 211 ISSVSITKDKKCFIASCTDETVKLIDIDSYETLKEYKGHKNKVYKINSCSNFDDSLIISG 270
Query: 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQ 150
S+ D + L K L GH + + + SK+ FI+ S D T+ +WDQ
Sbjct: 271 SE---DNDFYIYELLSGKLLSKLSGHSNIITHVDSHPSKNQFITSSTDCTIRIWDQ 323
Score = 63 (27.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 30/150 (20%), Positives = 59/150 (39%)
Query: 175 VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD 234
V + G IR +D R G + IS ++ K D + + + + + ++D
Sbjct: 183 VITSSVDGCIRTYDVRM---GTLVTYEDTIPISSVSITK---DKKCFIASCTDETVKLID 236
Query: 235 SFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDT 294
L Y ++ + + + + +ISGS D Y + + SGK ++
Sbjct: 237 IDSYETLKEYKGHK-NKVYKINSCSNFDDSLIISGSEDNDFYIYELLSGKLLSKLSGHSN 295
Query: 295 EPPVIKWTPGSLMFVTGSSELSFWIPDLSK 324
+ P F+T S++ + I D S+
Sbjct: 296 IITHVDSHPSKNQFITSSTDCTIRIWDQSE 325
>UNIPROTKB|F6XII0 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
GeneTree:ENSGT00390000004228 OMA:QFEGHTK Ensembl:ENSCAFT00000013108
EMBL:AAEX03001524 Uniprot:F6XII0
Length = 517
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 65/277 (23%), Positives = 124/277 (44%)
Query: 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV 82
S E +F + F + LV S+D ++L+D++ L+ V V
Sbjct: 69 SQEPIKTFSRFKDTAYCATFRQDGKLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTV 128
Query: 83 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK---DCFISG 139
FT+ V+ + D +++L + ++K + FK H D V C+SK D F++G
Sbjct: 129 DFTADKYHVVSGAD---DYTVKLWDIPNSKEIVTFKEHSDYV--RCGCASKLNPDLFVTG 183
Query: 140 SLDRTVLLWDQRAEKCQGLLRVQ-GRPAAA---YDDQGLVFAVAFGGYIRMFDARKYEKG 195
S D TV ++D R Q ++ V+ G+P + + GL+ A A G Y++++D K G
Sbjct: 184 SYDHTVKMFDARTN--QSVISVEHGQPVESVLLFPSGGLL-ASAGGRYVKIWDMLK---G 237
Query: 196 PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255
+ S+ + S+ G+ +L +++ + V + ++ +++ S L
Sbjct: 238 GQLLVSLKNHHKTVTCLYLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAA----SIL 293
Query: 256 EASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF 292
+ + E ++ G +G + SV+ K A SF
Sbjct: 294 SLALAHEDETIVVGMTNGIL---SVKHRKSEAKKDSF 327
Score = 127 (49.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 67/263 (25%), Positives = 113/263 (42%)
Query: 35 GRISSMDFHKSS--SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
G +S +DF +Y VTAS I +Y + +KT + K F ++
Sbjct: 39 GAVSKVDFSPQPPYNYAVTASS--RIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGKLLV 96
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
S++G ++L + LR F+GH V ++ + K +SG+ D TV LWD
Sbjct: 97 AGSEDG---GVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPN 153
Query: 153 EKCQGLLRVQG---RPAAAYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD 208
K + R A + L ++ ++MFDAR + + SV
Sbjct: 154 SKEIVTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNQS----VISVEHGQPV 209
Query: 209 ANVVKFSNDGRLMLLTTMEG-HIHVLDSFRGTLLSTYNVKPVSRNSTLEASF-SPEGMFV 266
+V+ F + G LL + G ++ + D +G L ++K + + T+ + S G +
Sbjct: 210 ESVLLFPSGG---LLASAGGRYVKIWDMLKGGQLLV-SLK--NHHKTVTCLYLSSSGQRL 263
Query: 267 ISGSGDGSVYAWSVRSGKEVASW 289
+SGS D V +S S K V S+
Sbjct: 264 LSGSLDRKVKVYSTTSYKVVHSF 286
>UNIPROTKB|E2QVD0 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
Ensembl:ENSCAFT00000013108 Uniprot:E2QVD0
Length = 518
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 65/277 (23%), Positives = 124/277 (44%)
Query: 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV 82
S E +F + F + LV S+D ++L+D++ L+ V V
Sbjct: 69 SQEPIKTFSRFKDTAYCATFRQDGKLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTV 128
Query: 83 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK---DCFISG 139
FT+ V+ + D +++L + ++K + FK H D V C+SK D F++G
Sbjct: 129 DFTADKYHVVSGAD---DYTVKLWDIPNSKEIVTFKEHSDYV--RCGCASKLNPDLFVTG 183
Query: 140 SLDRTVLLWDQRAEKCQGLLRVQ-GRPAAA---YDDQGLVFAVAFGGYIRMFDARKYEKG 195
S D TV ++D R Q ++ V+ G+P + + GL+ A A G Y++++D K G
Sbjct: 184 SYDHTVKMFDARTN--QSVISVEHGQPVESVLLFPSGGLL-ASAGGRYVKIWDMLK---G 237
Query: 196 PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255
+ S+ + S+ G+ +L +++ + V + ++ +++ S L
Sbjct: 238 GQLLVSLKNHHKTVTCLYLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAA----SIL 293
Query: 256 EASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF 292
+ + E ++ G +G + SV+ K A SF
Sbjct: 294 SLALAHEDETIVVGMTNGIL---SVKHRKSEAKKDSF 327
Score = 127 (49.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 67/263 (25%), Positives = 113/263 (42%)
Query: 35 GRISSMDFHKSS--SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
G +S +DF +Y VTAS I +Y + +KT + K F ++
Sbjct: 39 GAVSKVDFSPQPPYNYAVTASS--RIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGKLLV 96
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
S++G ++L + LR F+GH V ++ + K +SG+ D TV LWD
Sbjct: 97 AGSEDG---GVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPN 153
Query: 153 EKCQGLLRVQG---RPAAAYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD 208
K + R A + L ++ ++MFDAR + + SV
Sbjct: 154 SKEIVTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNQS----VISVEHGQPV 209
Query: 209 ANVVKFSNDGRLMLLTTMEG-HIHVLDSFRGTLLSTYNVKPVSRNSTLEASF-SPEGMFV 266
+V+ F + G LL + G ++ + D +G L ++K + + T+ + S G +
Sbjct: 210 ESVLLFPSGG---LLASAGGRYVKIWDMLKGGQLLV-SLK--NHHKTVTCLYLSSSGQRL 263
Query: 267 ISGSGDGSVYAWSVRSGKEVASW 289
+SGS D V +S S K V S+
Sbjct: 264 LSGSLDRKVKVYSTTSYKVVHSF 286
>UNIPROTKB|Q8NAA4 [details] [associations]
symbol:ATG16L2 "Autophagy-related protein 16-2"
species:9606 "Homo sapiens" [GO:0006914 "autophagy" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000112569
HOVERGEN:HBG050534 InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914
EMBL:AK093017 EMBL:AK090597 EMBL:CH471076 EMBL:BC036713
EMBL:BC137489 EMBL:BC137490 EMBL:BC142718 EMBL:BC146660
EMBL:AL832974 IPI:IPI00300536 IPI:IPI00892538 IPI:IPI00892678
RefSeq:NP_203746.1 UniGene:Hs.653186 ProteinModelPortal:Q8NAA4
SMR:Q8NAA4 IntAct:Q8NAA4 PhosphoSite:Q8NAA4 DMDM:189027648
PRIDE:Q8NAA4 Ensembl:ENST00000321297 GeneID:89849 KEGG:hsa:89849
UCSC:uc001otd.3 CTD:89849 GeneCards:GC11P072525 H-InvDB:HIX0009913
HGNC:HGNC:25464 HPA:HPA045444 neXtProt:NX_Q8NAA4
PharmGKB:PA142672575 InParanoid:Q8NAA4 OrthoDB:EOG44F68R
PhylomeDB:Q8NAA4 GenomeRNAi:89849 NextBio:76342 ArrayExpress:Q8NAA4
Bgee:Q8NAA4 CleanEx:HS_ATG16L2 Genevestigator:Q8NAA4 Uniprot:Q8NAA4
Length = 619
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 56/253 (22%), Positives = 109/253 (43%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYS 94
++++ F +SS L T D I L++V + +T+ + V F V+ +
Sbjct: 339 VNAVRFGPNSSLLATGGADRLIHLWNVVGSRLEANQTLEGAGGSITSVDFDPSGYQVLAA 398
Query: 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
+ N ++ +L + + + GH D+V + ++ ++GS DRTV WD
Sbjct: 399 TYN---QAAQLWKVGEAQSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAY 455
Query: 155 CQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPF--DIFSVGGDISDANVV 212
C + V ++ + IR +D+R GP + V G ++ ++
Sbjct: 456 CSRTINVLSYCNDVVCGDHIIISGHNDQKIRFWDSR----GPHCTQVIPVQGRVTSLSL- 510
Query: 213 KFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNST-LEASFSPEGMFVISGSG 271
S+D +L + + + V+D + + S +A FSP+ + ++GS
Sbjct: 511 --SHDQLHLLSCSRDNTLKVIDLRVSNIRQVFRADGFKCGSDWTKAVFSPDRSYALAGSC 568
Query: 272 DGSVYAWSVRSGK 284
DG++Y W V +GK
Sbjct: 569 DGALYIWDVDTGK 581
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 160 (61.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 41/146 (28%), Positives = 73/146 (50%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F D+ G + S+DFH + V+ DD +I+++ + C+ T+N + V F H
Sbjct: 49 FEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSF-HHDL 107
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
I S + D+++R+ + + + + GH+ V+S S+D +S SLD+TV +WD
Sbjct: 108 PWIISCSD--DQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWD 165
Query: 150 QRAEKCQGLLRVQGRPAA---AYDDQ 172
GL + P + A++DQ
Sbjct: 166 -----ISGLRKKHSAPTSSVRAFEDQ 186
Score = 38 (18.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 257 ASFSPEGMFVISGSGDGSVYAWSVRSGK 284
ASF P ++S D V W + K
Sbjct: 219 ASFHPTLPLIVSAGDDRVVKLWRMSDTK 246
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 68/331 (20%), Positives = 128/331 (38%)
Query: 2 VGSQSEREDKV---SLELSEE-ILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDES 57
V SQ + + K+ S +++E+ + SFR + I+ DF + + S D
Sbjct: 11 VASQKQTQSKLGNTSSKITEQQTTHDPALSRSFRGHEDIITCADFDPKMRQVASCSKDSI 70
Query: 58 IRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 117
+ +++ K V V ++ T+ + G D +RL
Sbjct: 71 VYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGETI---ASCGQDRQIRLWQNTVQSKCSII 127
Query: 118 KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK--CQ----------GLLRVQGR- 164
K H + S+S + +S S D+T+ LW + +K C G++ R
Sbjct: 128 KAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRL 187
Query: 165 PAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLL 223
A+ DD+ +++ + F + + I S + + V F DG ++
Sbjct: 188 VASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLIS 247
Query: 224 TTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283
++ + I + D L+ YN NS S P G F+ S D + W +R G
Sbjct: 248 SSFDHKIKITDIRSNKLIQHYNAHDAQVNSI---SIHPTGYFLASAGSDSKIKIWDLRQG 304
Query: 284 KEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
+++ + S D + +++ F TG S+
Sbjct: 305 RQIYTLYSNDKDITTVQFNQSGDYFATGGSQ 335
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 64/296 (21%), Positives = 128/296 (43%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
FR + +S + H YL++ S+D ++ + L T + + CF HP+
Sbjct: 356 FRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCF--HPS 413
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
++ +G D +++L L+ + +GH+ V S + S D S SLD T +WD
Sbjct: 414 GSKLATSSG-DSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWD 472
Query: 150 QRAEKCQGLLRVQGRPAAA---YDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
+E+C+ L + + ++ + + ++DAR G + S+ G +
Sbjct: 473 VNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDART---GKCEQ-SLYGHM 528
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL-LSTYNVKPVSRNSTLEASFSPEGMF 265
N F+ G ++ G + D FR + + + +V P S N E +F G
Sbjct: 529 HSVNDATFTPRGHIIASCDARGVTKLWD-FRKLIPIVSIDVGPSSGN---EVNFDQSGRV 584
Query: 266 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP-GSLMFVTGSS-ELSFWI 319
+ S +G ++ ++SG ++ + ++E + ++ G ++ GS + WI
Sbjct: 585 LAQASANGIIHLLDLKSG-QIHKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLWI 639
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F DY G + +DF+ S + + ++ D +I+++D+ ++ GV+ CF+ HP+
Sbjct: 182 FTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVN--CFSFHPS 239
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
Y D ++++L L + + + GH V++++ D F SG D VL+W
Sbjct: 240 GN-YLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 136 (52.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 56/247 (22%), Positives = 101/247 (40%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
I+ ++F S S + ++S D+++RL+ + + V V F+ ++ +S
Sbjct: 63 ITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASD 122
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISG-SLDRTVLLWDQRAEKC 155
D+S+++ + K+L Y H V + S I+ DRTV LWD + +C
Sbjct: 123 ---DKSVKVWGVERKKFL-YSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQC 178
Query: 156 QGLLRVQGRPAAAYDDQGLVFAVAFGGY---IRMFDARKYEK-GPFDIFSVGGDISDANV 211
+ G A D +A G I+++D R + + + + G N
Sbjct: 179 INIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAG-----VNC 233
Query: 212 VKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 271
F G ++ + + I +LD G L+ T + + L +FS +G SG
Sbjct: 234 FSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGH---KGPVLTVTFSRDGDLFASGGA 290
Query: 272 DGSVYAW 278
D V W
Sbjct: 291 DSQVLMW 297
Score = 124 (48.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 47/194 (24%), Positives = 83/194 (42%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F+ + + S+ F + LVTASDD+S++++ V L ++N V F+ P
Sbjct: 98 FKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFS--PD 155
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+ +S G D ++RL ++ + F + + SS C S D T+ +WD
Sbjct: 156 GRLIASC-GDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWD 214
Query: 150 QRAEKCQGLLRVQ--GRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
R K +V G ++ G + + + I++ D + G I+++ G
Sbjct: 215 IRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLE---GRL-IYTLHGHK 270
Query: 207 SDANVVKFSNDGRL 220
V FS DG L
Sbjct: 271 GPVLTVTFSRDGDL 284
>UNIPROTKB|F1NUQ0 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000346 "transcription export complex" evidence=IEA]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006406 GO:GO:0000346
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:AADN02028708 IPI:IPI00595007
Ensembl:ENSGALT00000040847 Uniprot:F1NUQ0
Length = 381
Score = 146 (56.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 45/191 (23%), Positives = 83/191 (43%)
Query: 95 SKNGWDESLRLLSLHDNKYLRY--FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQR 151
+ +D++ + L ++ ++ ++GH D V L S+ D F++ S D+T+ +WD R
Sbjct: 43 ASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVR 102
Query: 152 AEKCQGLLRVQGRPA-AAYDDQGLVFAVAFGGYIRMF-DARKYEKGPFDIFSVGGDISDA 209
KC + +G + G AV + F DA+ + + F +
Sbjct: 103 TTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EV 157
Query: 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269
N + ++ND + LT G I++L + + N P ++ + F P G + +G
Sbjct: 158 NEISWNNDNNMFFLTNGNGCINILSYPELKPIQSINAHP---SNCICIKFDPMGKYFATG 214
Query: 270 SGDGSVYAWSV 280
S D V W V
Sbjct: 215 SADALVSLWDV 225
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 55/201 (27%), Positives = 90/201 (44%)
Query: 84 FTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK--DCFISGSL 141
FT+ ++ +S +G + L + + L+ F GH V+ L L S+ + F+SG
Sbjct: 203 FTNSDMQILTASGDG---TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 259
Query: 142 DRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFG-GYIRMFDARKYEKGPFD 198
D+ ++WD R+ +C + Y G FA R++D R +
Sbjct: 260 DKKAMVWDMRSGQCIQSFETHDSDINSVRYYPSGDAFASGSDDATCRLYDLRADRE--VA 317
Query: 199 IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 258
I+S I A+ V FS GRL+ + I+V D +G+ +S +R STL S
Sbjct: 318 IYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL-FGHENRVSTLRVS 376
Query: 259 FSPEGMFVISGSGDGSVYAWS 279
P+G SGS D ++ W+
Sbjct: 377 --PDGTAFCSGSWDHTLRIWA 395
Score = 140 (54.3 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 55/220 (25%), Positives = 93/220 (42%)
Query: 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAY 169
K R KGH ++V+ + C K +S S D V++WD + + + A AY
Sbjct: 96 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 155
Query: 170 DDQGLVFAVAFGG-------YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLML 222
G A+A GG Y FD K E SV + + F+N +L
Sbjct: 156 APSGC--AIACGGLDNKCSVYPLTFD--KNENMAAKKKSVAMHTNYLSACSFTNSDMQIL 211
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ +G + D G LL +++ L+ + S G +SG D W +RS
Sbjct: 212 TASGDGTCALWDVESGQLLQSFHGHGADV-LCLDLAPSETGNTFVSGGCDKKAMVWDMRS 270
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
G+ + S+ + D++ +++ P F +GS + + + DL
Sbjct: 271 GQCIQSFETHDSDINSVRYYPSGDAFASGSDDATCRLYDL 310
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT-TVIYSS 95
+S+ F S ++TAS D + L+DV + L++ + +G D++C P+ T
Sbjct: 198 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSETGNTFV 255
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
G D+ + + + ++ F+ H + S+ S D F SGS D T L+D RA++
Sbjct: 256 SGGCDKKAMVWDMRSGQCIQSFETHDSDINSVRYYPSGDAFASGSDDATCRLYDLRADR 314
>UNIPROTKB|Q29RH4 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 KO:K12880 GO:GO:0003723 GO:GO:0051028 EMBL:BC114172
IPI:IPI00732803 RefSeq:NP_001039765.1 UniGene:Bt.3953
ProteinModelPortal:Q29RH4 GeneID:529231 KEGG:bta:529231 CTD:84321
HOVERGEN:HBG059732 NextBio:20874992 InterPro:IPR011659 Pfam:PF07676
Uniprot:Q29RH4
Length = 351
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/191 (23%), Positives = 83/191 (43%)
Query: 95 SKNGWDESLRLLSLHDNKYLRY--FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQR 151
+ +D++ + L ++ ++ ++GH D V L S+ D F++ S D+T+ +WD R
Sbjct: 71 ASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVR 130
Query: 152 AEKCQGLLRVQGRPA-AAYDDQGLVFAVAFGGYIRMF-DARKYEKGPFDIFSVGGDISDA 209
KC + +G + G AV + F DA+ + + F +
Sbjct: 131 TTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EV 185
Query: 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269
N + ++ND + LT G I++L + + N P ++ + F P G + +G
Sbjct: 186 NEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHP---SNCICIKFDPMGKYFATG 242
Query: 270 SGDGSVYAWSV 280
S D V W V
Sbjct: 243 SADALVSLWDV 253
>UNIPROTKB|E2RC43 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046784 "intronless viral mRNA export from
host nucleus" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 InterPro:IPR011659
Pfam:PF07676 OMA:LAYACDD EMBL:AAEX03002980 RefSeq:XP_537899.2
ProteinModelPortal:E2RC43 Ensembl:ENSCAFT00000022750 GeneID:480781
KEGG:cfa:480781 NextBio:20855728 Uniprot:E2RC43
Length = 351
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/191 (23%), Positives = 83/191 (43%)
Query: 95 SKNGWDESLRLLSLHDNKYLRY--FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQR 151
+ +D++ + L ++ ++ ++GH D V L S+ D F++ S D+T+ +WD R
Sbjct: 71 ASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVR 130
Query: 152 AEKCQGLLRVQGRPA-AAYDDQGLVFAVAFGGYIRMF-DARKYEKGPFDIFSVGGDISDA 209
KC + +G + G AV + F DA+ + + F +
Sbjct: 131 TTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EV 185
Query: 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269
N + ++ND + LT G I++L + + N P ++ + F P G + +G
Sbjct: 186 NEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHP---SNCICIKFDPMGKYFATG 242
Query: 270 SGDGSVYAWSV 280
S D V W V
Sbjct: 243 SADALVSLWDV 253
>UNIPROTKB|Q96J01 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IDA] [GO:0000346
"transcription export complex" evidence=IDA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
KO:K12880 GO:GO:0003723 GO:GO:0000346 GO:GO:0046784 CTD:84321
HOVERGEN:HBG059732 InterPro:IPR011659 Pfam:PF07676 EMBL:AC138965
EMBL:BC006849 EMBL:BC068499 IPI:IPI00063729 RefSeq:NP_115737.1
UniGene:Hs.484227 UniGene:Hs.715943 ProteinModelPortal:Q96J01
SMR:Q96J01 IntAct:Q96J01 STRING:Q96J01 PhosphoSite:Q96J01
DMDM:48474597 PaxDb:Q96J01 PRIDE:Q96J01 DNASU:84321
Ensembl:ENST00000265097 GeneID:84321 KEGG:hsa:84321 UCSC:uc003mdg.4
GeneCards:GC05M175344 HGNC:HGNC:19072 HPA:HPA042764 HPA:HPA044009
HPA:HPA045071 MIM:606929 neXtProt:NX_Q96J01 PharmGKB:PA134893535
HOGENOM:HOG000264781 InParanoid:Q96J01 OMA:LAYACDD
OrthoDB:EOG49ZXPJ PhylomeDB:Q96J01 ChiTaRS:THOC3 GenomeRNAi:84321
NextBio:74048 ArrayExpress:Q96J01 Bgee:Q96J01 CleanEx:HS_THOC3
Genevestigator:Q96J01 GermOnline:ENSG00000051596 Uniprot:Q96J01
Length = 351
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/191 (23%), Positives = 83/191 (43%)
Query: 95 SKNGWDESLRLLSLHDNKYLRY--FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQR 151
+ +D++ + L ++ ++ ++GH D V L S+ D F++ S D+T+ +WD R
Sbjct: 71 ASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVR 130
Query: 152 AEKCQGLLRVQGRPA-AAYDDQGLVFAVAFGGYIRMF-DARKYEKGPFDIFSVGGDISDA 209
KC + +G + G AV + F DA+ + + F +
Sbjct: 131 TTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EV 185
Query: 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269
N + ++ND + LT G I++L + + N P ++ + F P G + +G
Sbjct: 186 NEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHP---SNCICIKFDPMGKYFATG 242
Query: 270 SGDGSVYAWSV 280
S D V W V
Sbjct: 243 SADALVSLWDV 253
>UNIPROTKB|F1S386 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:CU993810 RefSeq:XP_003123712.1
Ensembl:ENSSSCT00000015360 GeneID:100524425 KEGG:ssc:100524425
Uniprot:F1S386
Length = 351
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/191 (23%), Positives = 83/191 (43%)
Query: 95 SKNGWDESLRLLSLHDNKYLRY--FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQR 151
+ +D++ + L ++ ++ ++GH D V L S+ D F++ S D+T+ +WD R
Sbjct: 71 ASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVR 130
Query: 152 AEKCQGLLRVQGRPA-AAYDDQGLVFAVAFGGYIRMF-DARKYEKGPFDIFSVGGDISDA 209
KC + +G + G AV + F DA+ + + F +
Sbjct: 131 TTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EV 185
Query: 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269
N + ++ND + LT G I++L + + N P ++ + F P G + +G
Sbjct: 186 NEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHP---SNCICIKFDPMGKYFATG 242
Query: 270 SGDGSVYAWSV 280
S D V W V
Sbjct: 243 SADALVSLWDV 253
>MGI|MGI:1920916 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10090 "Mus musculus"
[GO:0000346 "transcription export complex" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1920916 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 KO:K12880
GO:GO:0003723 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:AK010668 EMBL:BC019603 IPI:IPI00311904
RefSeq:NP_082873.2 UniGene:Mm.292487 ProteinModelPortal:Q8VE80
SMR:Q8VE80 PhosphoSite:Q8VE80 PaxDb:Q8VE80 PRIDE:Q8VE80
Ensembl:ENSMUST00000026990 GeneID:73666 KEGG:mmu:73666
UCSC:uc007qod.2 InParanoid:Q8VE80 NextBio:338741 Bgee:Q8VE80
CleanEx:MM_THOC3 Genevestigator:Q8VE80
GermOnline:ENSMUSG00000025872 Uniprot:Q8VE80
Length = 351
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/191 (23%), Positives = 83/191 (43%)
Query: 95 SKNGWDESLRLLSLHDNKYLRY--FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQR 151
+ +D++ + L ++ ++ ++GH D V L S+ D F++ S D+T+ +WD R
Sbjct: 71 ASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVR 130
Query: 152 AEKCQGLLRVQGRPA-AAYDDQGLVFAVAFGGYIRMF-DARKYEKGPFDIFSVGGDISDA 209
KC + +G + G AV + F DA+ + + F +
Sbjct: 131 TTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EV 185
Query: 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269
N + ++ND + LT G I++L + + N P ++ + F P G + +G
Sbjct: 186 NEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHP---SNCICIKFDPMGKYFATG 242
Query: 270 SGDGSVYAWSV 280
S D V W V
Sbjct: 243 SADALVSLWDV 253
>RGD|1311669 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10116 "Rattus norvegicus"
[GO:0000346 "transcription export complex" evidence=IEA;ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311669 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 EMBL:CH474032
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BC168852 IPI:IPI00364620
RefSeq:NP_001099529.1 UniGene:Rn.101956 STRING:B5DEY5
Ensembl:ENSRNOT00000000116 GeneID:290519 KEGG:rno:290519
UCSC:RGD:1311669 NextBio:631152 Genevestigator:B5DEY5
Uniprot:B5DEY5
Length = 351
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/191 (23%), Positives = 83/191 (43%)
Query: 95 SKNGWDESLRLLSLHDNKYLRY--FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQR 151
+ +D++ + L ++ ++ ++GH D V L S+ D F++ S D+T+ +WD R
Sbjct: 71 ASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVR 130
Query: 152 AEKCQGLLRVQGRPA-AAYDDQGLVFAVAFGGYIRMF-DARKYEKGPFDIFSVGGDISDA 209
KC + +G + G AV + F DA+ + + F +
Sbjct: 131 TTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EV 185
Query: 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269
N + ++ND + LT G I++L + + N P ++ + F P G + +G
Sbjct: 186 NEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHP---SNCICIKFDPMGKYFATG 242
Query: 270 SGDGSVYAWSV 280
S D V W V
Sbjct: 243 SADALVSLWDV 253
>TAIR|locus:2092722 [details] [associations]
symbol:LST8-1 "AT3G18140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005768 "endosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0048571
"long-day photoperiodism" evidence=IMP] [GO:1900088 "regulation of
inositol biosynthetic process" evidence=IMP] [GO:1900091
"regulation of raffinose biosynthetic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005768 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB020749 HSSP:P16649 GO:GO:0048571 OMA:NNKGNCY
EMBL:AY087463 EMBL:BT002312 IPI:IPI00542303 RefSeq:NP_188442.1
UniGene:At.6055 ProteinModelPortal:Q9LV27 SMR:Q9LV27 IntAct:Q9LV27
STRING:Q9LV27 PRIDE:Q9LV27 EnsemblPlants:AT3G18140.1 GeneID:821339
KEGG:ath:AT3G18140 TAIR:At3g18140 InParanoid:Q9LV27
PhylomeDB:Q9LV27 ProtClustDB:CLSN2683726 Genevestigator:Q9LV27
GO:GO:1900088 GO:GO:1900091 Uniprot:Q9LV27
Length = 305
Score = 119 (46.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 57/245 (23%), Positives = 101/245 (41%)
Query: 46 SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105
S L TAS D +IR ++ C +TI V+ + T P ++ + +RL
Sbjct: 5 SVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEIT--PDKHYLAA--ACNPHIRL 60
Query: 106 LSLHDN--KYLRYFKGHHDRVVSLSL-CSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ 162
++ N + + + H + V+++ C +K + SGS D TV +WD RA CQ
Sbjct: 61 FDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMY-SGSEDGTVKIWDLRAPGCQKEYESV 119
Query: 163 G--RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRL 220
+ +Q + + G IR++D R + V + V+ DG +
Sbjct: 120 AAVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMW---DGTM 176
Query: 221 MLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR-----NSTLEASFSPEGMFVISGSGDGSV 275
++ G +V RG T +P+ + L+ SP ++ + S D +V
Sbjct: 177 VVAANNRGTCYVWRLLRGKQTMT-EFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Query: 276 YAWSV 280
W+V
Sbjct: 236 KIWNV 240
Score = 65 (27.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 259 FSPEGMFVISGSGDGSVYAWSVRSGKEV 286
FS +G F+++ S D + WS+ +GKEV
Sbjct: 261 FSVDGEFLVTASSDMTARLWSMPAGKEV 288
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 143 (55.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 55/234 (23%), Positives = 99/234 (42%)
Query: 10 DKVSLELSEEILQ---SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA 66
DK S ++ E I+ + E+ + + ++G + F +YL+++S+D ++RL+ +
Sbjct: 515 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 573
Query: 67 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS 126
TCL Y V F+ + Y G D RL + + LR F GH V
Sbjct: 574 TCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC 630
Query: 127 LSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAV-AFGGY 183
+ + +GS DRTV LWD C + P + + G A A G
Sbjct: 631 TRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 690
Query: 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237
+ ++D G + + G ++FS DG ++ +M+ + + D+ +
Sbjct: 691 VLLWDIGH---GLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIK 740
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 46/190 (24%), Positives = 80/190 (42%)
Query: 100 DESL-RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 158
D+ L R++ L+ GH V S ++ +S S D TV LW + C L
Sbjct: 519 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC--L 576
Query: 159 LRVQGRPAAAYDDQGLVFAVAF--GGY---IRMFDARKYEKGPFDIFSVGGDISDANVVK 213
+ +G +D Q + F GG+ R++ Y+ P IF+ G ++D N +
Sbjct: 577 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ--PLRIFA--GHLADVNCTR 632
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
F + + + + + + D G + + +S +FSP G F+ +G+ DG
Sbjct: 633 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL---TFSPNGRFLATGATDG 689
Query: 274 SVYAWSVRSG 283
V W + G
Sbjct: 690 RVLLWDIGHG 699
Score = 51 (23.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 224 TTMEGHIHVLDSFRGTLLSTYNVK--PV------SRNSTLEA-SFSPE 262
TT GHI++ ++ + LL TY K PV RN L A ++SP+
Sbjct: 751 TTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ 798
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 139 (54.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 30/119 (25%), Positives = 60/119 (50%)
Query: 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTT 90
R + ++S+ + + +VTAS D ++R +D+T C++ I++ + G+ C +
Sbjct: 344 RGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGI--ACAQYNGKF 401
Query: 91 VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
++ S D ++R+ K LR +GH D + ++ K +SG D TV +W+
Sbjct: 402 IVSGSS---DLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEK--IVSGGYDGTVRIWN 455
Score = 50 (22.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 266 VISGSGDGSVYAWSVRSGKE-VASWMSFDTEPPVIKWTPGSLMFVTGSSELSFW 318
++SG DG+V W+ +G++ S ++ +++ ++ T SSE+ W
Sbjct: 442 IVSGGYDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQFDHRRIIACTHSSEILVW 495
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 143 (55.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 55/234 (23%), Positives = 99/234 (42%)
Query: 10 DKVSLELSEEILQ---SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA 66
DK S ++ E I+ + E+ + + ++G + F +YL+++S+D ++RL+ +
Sbjct: 517 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 575
Query: 67 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS 126
TCL Y V F+ + Y G D RL + + LR F GH V
Sbjct: 576 TCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC 632
Query: 127 LSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAV-AFGGY 183
+ + +GS DRTV LWD C + P + + G A A G
Sbjct: 633 TRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 692
Query: 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237
+ ++D G + + G ++FS DG ++ +M+ + + D+ +
Sbjct: 693 VLLWDIGH---GLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIK 742
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 46/190 (24%), Positives = 80/190 (42%)
Query: 100 DESL-RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 158
D+ L R++ L+ GH V S ++ +S S D TV LW + C L
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC--L 578
Query: 159 LRVQGRPAAAYDDQGLVFAVAF--GGY---IRMFDARKYEKGPFDIFSVGGDISDANVVK 213
+ +G +D Q + F GG+ R++ Y+ P IF+ G ++D N +
Sbjct: 579 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ--PLRIFA--GHLADVNCTR 634
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
F + + + + + + D G + + +S +FSP G F+ +G+ DG
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL---TFSPNGRFLATGATDG 691
Query: 274 SVYAWSVRSG 283
V W + G
Sbjct: 692 RVLLWDIGHG 701
Score = 51 (23.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 224 TTMEGHIHVLDSFRGTLLSTYNVK--PV------SRNSTLEA-SFSPE 262
TT GHI++ ++ + LL TY K PV RN L A ++SP+
Sbjct: 753 TTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ 800
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 61/278 (21%), Positives = 118/278 (42%)
Query: 48 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107
Y+ ++S D S+R++D TA C +T+ V C ++YS+ D ++++
Sbjct: 219 YVASSSKDGSVRVWDTTAGRCERTLTGHAQSV--TCLRWGGDGLLYSASQ--DRTIKVWR 274
Query: 108 LHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-VQGRPA 166
HD R +GH V +++L S+ +G+ + A+ +G L+ ++ R
Sbjct: 275 AHDGVLCRTLQGHGHWVNTMAL-STDYALRTGAFEPAEA--SVNAQDLRGSLQELKERAL 331
Query: 167 AAYD---DQGLVFAVAFGGYIRMFDARKYE-KGPFDIFSVGGDISDANVVKFSNDGRLML 222
+ Y+ QG V+ +F E K P + + G + N V FS D R++
Sbjct: 332 SRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP--LARMTGHQALINQVVFSPDSRVIA 389
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ + I + D G L++ + + ++S + ++SGS D ++ W V++
Sbjct: 390 SASFDKSIKLWDGRTGKYLASLRGHVAA---VYQIAWSADSRLLVSGSSDSTLKVWDVKA 446
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
K E + W+P +G + L W
Sbjct: 447 QKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 68/312 (21%), Positives = 132/312 (42%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
S ++ + S+ F + YL + S D ++R +D++ T T ++ V + ++
Sbjct: 110 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 169
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLS---LCSSKDC-FI-SGSLD 142
+ KNG + L K + R GH + +LS L ++ +C ++ S S D
Sbjct: 170 KKLASGCKNG---QILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKD 226
Query: 143 RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIF 200
+V +WD A +C+ L Q + GL+++ + I+++ A G
Sbjct: 227 GSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHD---GVL-CR 282
Query: 201 SVGGDISDANVVKFSNDGRLML--LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 258
++ G N + S D L E ++ D RG+L + +SR + +
Sbjct: 283 TLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQD-LRGSL-QELKERALSRYNLVRGQ 340
Query: 259 FSPEGMFVISGSGDGSVYAWSVRSGKE-VASWMSFDTEPPVIKWTPGSLMFVTGSSELSF 317
PE + +SGS D +++ WS K+ +A + ++P S + + S + S
Sbjct: 341 -GPERL--VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSI 397
Query: 318 WIPDLSKLGAYV 329
+ D + G Y+
Sbjct: 398 KLWD-GRTGKYL 408
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 67/310 (21%), Positives = 129/310 (41%)
Query: 33 YNGRISSMD-FHKSSSYLVTASDDESIRLYDVTAAT-CLKTINSKKYGVDLVCFTSHPTT 90
+N ISS+ F K++ L++ S D ++L++V C++T + + + + + + T
Sbjct: 284 HNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRTFSGHRQAIKDIAWNNRGTN 343
Query: 91 VIYSSKNG----WD-ESLRLLSLHDNKYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRT 144
+ +S + WD E+ ++S + + + K H D S + F++G+ D+
Sbjct: 344 FLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDN-------SKQHLFVAGTSDKK 396
Query: 145 VLLWDQRAEKCQGLLRVQGRPAAAYDDQ-GLVFAVAFGGYIRMFDARKYEKG-------- 195
++ WD R+ G YD G V + F R F +K
Sbjct: 397 IICWDTRS----------GDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDI 446
Query: 196 PFDI-FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHV---LDSFRGTLLSTYNVKPVSR 251
P D+ + + V + +G+ M +++ I + L+ F+ T+ VS
Sbjct: 447 PVDMKYIADPTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVS- 505
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP--GSLMFV 309
+ FSP+ +++SG GDG Y W ++ K W + D W P S +
Sbjct: 506 GYACQLDFSPDMSYLVSGDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHPHEASKVVT 565
Query: 310 TG-SSELSFW 318
G ++ +W
Sbjct: 566 AGWDGQIKYW 575
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 37/138 (26%), Positives = 64/138 (46%)
Query: 21 LQSMEVGMSFRDYNGRISSMD---FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY 77
L S + R Y G ++ +D FH +S+YL T S D+++RL+ ++ +
Sbjct: 410 LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 469
Query: 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI 137
V + F+ + Y + G D+ L+L L + +GH D + SL+
Sbjct: 470 PVLSLSFSPNGK---YLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIA 526
Query: 138 SGSLDRTVLLWDQRAEKC 155
S S+D +V +WD R+ C
Sbjct: 527 SASMDNSVRVWDIRSTCC 544
Score = 125 (49.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 49/187 (26%), Positives = 81/187 (43%)
Query: 14 LELSEEI-LQSMEVGMSFRD---YNGR---ISSMDFHKSSSYLVTASDDESIRLYDVTAA 66
L SE++ ++ ++G SF + Y G + +D S Y + S D + RL+
Sbjct: 358 LSCSEDMSIRYWDLG-SFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRT 416
Query: 67 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS 126
L+ VD V F HP + Y + D+++RL S +R F GH V+S
Sbjct: 417 YPLRIYAGHLADVDCVKF--HPNSN-YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Query: 127 LSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAAAYD-DQGLVFAVAFGGY 183
LS + S D+ + LWD + LR + A+ D GL+ + +
Sbjct: 474 LSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNS 533
Query: 184 IRMFDAR 190
+R++D R
Sbjct: 534 VRVWDIR 540
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 68/317 (21%), Positives = 138/317 (43%)
Query: 19 EILQSMEVGMSFR--DYNGRISSMDF-HKSSSYLVTASDDESIRLYDVTAATCLKTI-NS 74
E ++ E+ +S R YN I+ M F +L A++ E +R+YDV +C +
Sbjct: 341 ENVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGH 400
Query: 75 KKYGVDL-VCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-S 132
K+ + L C +S +I + D+++RL + + GH+ +++++ S
Sbjct: 401 KEVVLSLDTCVSSSGNVLIVTGSK--DKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKS 458
Query: 133 KDCFISGSLDRTVLLW--DQRAEKCQGLLRVQGRPAAAYDDQGL-VFAVAFGGYIRMFDA 189
F+SGS DRT+ +W D +E + + ++ R A D+ + AVA + +
Sbjct: 459 FSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGS 518
Query: 190 RKYEKG----P--FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLST 243
P + ++ G V+FS + ++ + + + + G+ L T
Sbjct: 519 EDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKT 578
Query: 244 YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP 303
+ +S L ASF +G +S DG + W+V + + +A++ + + +
Sbjct: 579 FEGHT---SSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGK 635
Query: 304 GSLMFVTGSSE--LSFW 318
+ M TG + ++ W
Sbjct: 636 KTEMIATGGGDAVINLW 652
Score = 119 (46.9 bits), Expect = 0.00066, P = 0.00066
Identities = 43/186 (23%), Positives = 75/186 (40%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L++++ S++ + G + M H S L TA D + ++DV C K V
Sbjct: 89 LETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVS 148
Query: 81 LVCFTSHPTT---VIYSSKNGWDESLRLLSLH----DNKYLRYFKGHHDRVVSLSLCSSK 133
+ F HP + ++ S + D ++R+ L+ + K L + H V S++L
Sbjct: 149 SILF--HPDSNKNILISGSD--DATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDG 204
Query: 134 DCFISGSLDRTVLLWDQRAEKCQGLLRV-QGRPAAAYDDQGLVFAVAFGGYIRMFDARKY 192
S D+ V LWD C+ + + A G FA ++ D +K
Sbjct: 205 LTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFA----SFVASLDQKKS 260
Query: 193 EKGPFD 198
+K D
Sbjct: 261 KKKESD 266
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 37/138 (26%), Positives = 63/138 (45%)
Query: 21 LQSMEVGMSFRDYNGRISSMD---FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY 77
L S + R Y G ++ +D FH +S+YL T S D+++RL+ ++ +
Sbjct: 428 LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 487
Query: 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI 137
V + F+ + Y + G D+ L+L L + +GH D + SL+
Sbjct: 488 PVLSLAFSPNGK---YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA 544
Query: 138 SGSLDRTVLLWDQRAEKC 155
S S+D +V +WD R C
Sbjct: 545 SASMDNSVRVWDIRNTYC 562
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 58/218 (26%), Positives = 93/218 (42%)
Query: 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGV-DLVCFTSHPT 89
R + G + S F SS L++ S+D SIR +D+ + T Y V DL P
Sbjct: 357 RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDL---DISPY 413
Query: 90 TVIYSSKNGWDESLRLLSLHDNKY-LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
++ ++S D + RL S D Y LR + GH V + + + +GS D+TV LW
Sbjct: 414 SLYFAS-GSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 471
Query: 149 DQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFS-VGGD 205
+ L P + A+ G A A G R+ + ++ ++ + G
Sbjct: 472 SAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASA-GEDQRL---KLWDLASGTLYKELRGH 527
Query: 206 ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLST 243
+ + FS D L+ +M+ + V D R T ST
Sbjct: 528 TDNITSLTFSPDSSLIASASMDNSVRVWD-IRNTYCST 564
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 142 (55.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 55/234 (23%), Positives = 99/234 (42%)
Query: 10 DKVSLELSEEILQ---SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA 66
DK S ++ E I+ + E+ + + ++G + F +YL+++S+D ++RL+ +
Sbjct: 518 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 576
Query: 67 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS 126
TCL Y V F+ + Y G D RL + + LR F GH V
Sbjct: 577 TCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC 633
Query: 127 LSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAV-AFGGY 183
+ + +GS DRTV LWD C + P + + G A A G
Sbjct: 634 TRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 693
Query: 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237
+ ++D G + + G ++FS DG ++ +M+ + + D+ +
Sbjct: 694 VLLWDIGH---GLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 743
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 46/190 (24%), Positives = 80/190 (42%)
Query: 100 DESL-RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 158
D+ L R++ L+ GH V S ++ +S S D TV LW + C L
Sbjct: 522 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC--L 579
Query: 159 LRVQGRPAAAYDDQGLVFAVAF--GGY---IRMFDARKYEKGPFDIFSVGGDISDANVVK 213
+ +G +D Q + F GG+ R++ Y+ P IF+ G ++D N +
Sbjct: 580 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ--PLRIFA--GHLADVNCTR 635
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
F + + + + + + D G + + +S +FSP G F+ +G+ DG
Sbjct: 636 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL---TFSPNGRFLATGATDG 692
Query: 274 SVYAWSVRSG 283
V W + G
Sbjct: 693 RVLLWDIGHG 702
Score = 51 (23.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 224 TTMEGHIHVLDSFRGTLLSTYNVK--PV------SRNSTLEA-SFSPE 262
TT GHI++ ++ + LL TY K PV RN L A ++SP+
Sbjct: 754 TTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ 801
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 147 (56.8 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 37/138 (26%), Positives = 63/138 (45%)
Query: 21 LQSMEVGMSFRDYNGRISSMD---FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY 77
L S + R Y G ++ +D FH +S+YL T S D+++RL+ ++ +
Sbjct: 410 LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 469
Query: 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI 137
V + F+ + Y + G D+ L+L L + +GH D + SL+
Sbjct: 470 PVLSLAFSPNGK---YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIA 526
Query: 138 SGSLDRTVLLWDQRAEKC 155
S S+D +V +WD R C
Sbjct: 527 SASMDNSVRVWDIRNTYC 544
Score = 116 (45.9 bits), Expect = 0.00085, P = 0.00085
Identities = 57/217 (26%), Positives = 92/217 (42%)
Query: 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGV-DLVCFTSHPT 89
R + G + S F SS L++ S+D SIR +D+ + T Y V DL P
Sbjct: 339 RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDL---DISPY 395
Query: 90 TVIYSSKNGWDESLRLLSLHDNKY-LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
++ ++S D + RL S D Y LR + GH V + + + +GS D+TV LW
Sbjct: 396 SLYFAS-GSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 453
Query: 149 DQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFS-VGGD 205
+ L P + A+ G A A G R+ + ++ ++ + G
Sbjct: 454 SAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASA-GEDQRL---KLWDLASGTLYKELRGH 509
Query: 206 ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS 242
+ + FS D L+ +M+ + V D R T S
Sbjct: 510 TDNITSLTFSPDSGLIASASMDNSVRVWD-IRNTYCS 545
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 31 RDYNGRISSMD---FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87
R Y G +S +D FH +S+Y+ T S D+++RL+ ++ + V + F+ +
Sbjct: 432 RLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPN 491
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
Y + G D+ L+L L + +GH D + SLS S S+D TV +
Sbjct: 492 GK---YLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRV 548
Query: 148 WDQR 151
WD R
Sbjct: 549 WDIR 552
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 51/228 (22%), Positives = 95/228 (41%)
Query: 10 DKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL 69
D + E +E E+ + R ++G + F +S L++ S+D ++R +D+ + T
Sbjct: 331 DVLEEEADDEDASGSEI-KTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFT-- 387
Query: 70 KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSL 129
T+ + + + P ++ +S+ + D + RL S LR + GH V +
Sbjct: 388 NTVLYRGHAYPVWDVDVSPCSLYFSTASH-DRTARLWSFARTYPLRLYAGHLSDVDCVKF 446
Query: 130 CSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAA--AYDDQGLVFAVAFGGY-IRM 186
+ + +GS D+TV LW R L P A+ G A A +++
Sbjct: 447 HPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKL 506
Query: 187 FDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD 234
+D G F + G + + FS D L+ +M+ + V D
Sbjct: 507 WDLAS--GGLFK--DLRGHTDTISSLSFSQDSSLVASASMDNTVRVWD 550
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 146 (56.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 35/146 (23%), Positives = 70/146 (47%)
Query: 10 DKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL 69
D +S +L +++ + SF ++ + +DF + S L + S D I+++ + C+
Sbjct: 241 DYISGKLKKDL--QYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCI 298
Query: 70 KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSL 129
+ ++ GV + F+ + ++ +S +D++ R+ L K L+ F+GH V
Sbjct: 299 RRFDAHSQGVTSLSFSRDGSQLLSTS---FDQTARIHGLKSGKLLKEFRGHTSYVNHAIF 355
Query: 130 CSSKDCFISGSLDRTVLLWDQRAEKC 155
S I+ S D TV +WD + C
Sbjct: 356 TSDGSRIITASSDCTVKVWDSKTTDC 381
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 146 (56.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 38/167 (22%), Positives = 76/167 (45%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F ++ ++ + F++ YL+T S D +I+++ + + C+KT+ GV + F +
Sbjct: 378 TFTGHSDGVTCLQFNRK--YLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQK 435
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
G D ++++ + H + + ++GH D VVS+ + +SGS D TV +W
Sbjct: 436 LI-----SGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS--IVSGSADHTVRVW 488
Query: 149 DQRAEKCQGLLRVQG--RPAAAYDDQGLVFAVAFGGYIRMFDARKYE 193
+ C L + +F+ + IRM+D E
Sbjct: 489 HVDSRTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNE 535
Score = 45 (20.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 258 SFSPEGMFVISGSGDGSVYAWSVRSGK 284
S + + +ISG+ D + W +++GK
Sbjct: 673 SIAADTFRIISGAHDRLIKVWDLQNGK 699
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 143 (55.4 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 37/136 (27%), Positives = 71/136 (52%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F D G + +DF+ S + + +A D++++++DV L+ GV+ C + HP
Sbjct: 51 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN--CISFHP 108
Query: 89 TT--VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
+ +I +S +G +L++L L + + + +GH V ++S + F SG D VL
Sbjct: 109 SGNYLITASSDG---TLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 165
Query: 147 LWDQRAEK--CQGLLR 160
LW ++ C+GL +
Sbjct: 166 LWRTNFDELHCKGLTK 181
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 143 (55.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 52/185 (28%), Positives = 82/185 (44%)
Query: 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK--DCFISGSLDRTVLLWDQRAEKCQG 157
D + L + + L+ F GH V+ L L S+ + F+SG D+ ++WD R+ +C
Sbjct: 175 DGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQ 234
Query: 158 LLRVQGRP--AAAYDDQGLVFAVAFG-GYIRMFDARKYEKGPFDIFSVGGDISDANVVKF 214
+ Y G FA R++D R + I+S I A+ V F
Sbjct: 235 AFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADRE--VAIYSKESIIFGASSVDF 292
Query: 215 SNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS 274
S GRL+ + I+V D +G+ +S +R STL S P+G SGS D +
Sbjct: 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSIL-FGHENRVSTLRVS--PDGTAFCSGSWDHT 349
Query: 275 VYAWS 279
+ W+
Sbjct: 350 LRVWA 354
Score = 132 (51.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 54/221 (24%), Positives = 93/221 (42%)
Query: 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAY 169
K R KGH ++V+ + C K +S S D V++WD + + + A AY
Sbjct: 54 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 113
Query: 170 DDQGLVFAVAFGG-------YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLML 222
G A+A GG Y FD K E SV + + F+N +
Sbjct: 114 APSGC--AIACGGLDNKCSVYPLTFD--KNENMAAKKKSVAMHTNYLSACSFTNSDMQQI 169
Query: 223 LTTM-EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 281
LT +G + D G LL +++ L+ + S G +SG D W +R
Sbjct: 170 LTASGDGTCALWDVESGQLLQSFHGHGADV-LCLDLAPSETGNTFVSGGCDKKAMVWDMR 228
Query: 282 SGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
SG+ + ++ + +++ +++ P F +GS + + + DL
Sbjct: 229 SGQCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDL 269
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 37 ISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT-TVIYS 94
+S+ F S ++TAS D + L+DV + L++ + +G D++C P+ T
Sbjct: 156 LSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSETGNTF 213
Query: 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
G D+ + + + ++ F+ H + S+ S D F SGS D T L+D RA++
Sbjct: 214 VSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADR 273
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 141 (54.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 55/234 (23%), Positives = 99/234 (42%)
Query: 10 DKVSLELSEEILQ---SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA 66
DK S ++ E I+ + E+ + + ++G + F +YL+++S+D ++RL+ +
Sbjct: 518 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 576
Query: 67 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS 126
TCL Y V F+ + Y G D RL + + LR F GH V
Sbjct: 577 TCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC 633
Query: 127 LSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAV-AFGGY 183
+ + +GS DRTV LWD C + P + + G A A G
Sbjct: 634 TRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 693
Query: 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237
+ ++D G + + G ++FS DG ++ +M+ + + D+ +
Sbjct: 694 VLLWDIGH---GLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 743
Score = 128 (50.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 45/190 (23%), Positives = 80/190 (42%)
Query: 100 DESL-RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 158
D+ L R++ L+ GH V S ++ +S S D TV LW + C L
Sbjct: 522 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC--L 579
Query: 159 LRVQGRPAAAYDDQGLVFAVAF--GGY---IRMFDARKYEKGPFDIFSVGGDISDANVVK 213
+ +G +D Q + F GG+ R++ Y+ P IF+ G ++D N +
Sbjct: 580 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ--PLRIFA--GHLADVNCTR 635
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
+ + + + + + + D G + + +S +FSP G F+ +G+ DG
Sbjct: 636 YHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL---TFSPNGRFLATGATDG 692
Query: 274 SVYAWSVRSG 283
V W + G
Sbjct: 693 RVLLWDIGHG 702
Score = 51 (23.0 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 224 TTMEGHIHVLDSFRGTLLSTYNVK--PV------SRNSTLEA-SFSPE 262
TT GHI++ ++ + LL TY K PV RN L A ++SP+
Sbjct: 754 TTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ 801
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 37/146 (25%), Positives = 77/146 (52%)
Query: 49 LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108
L T +D++++++D+ + C+KT++ + VC + +++S N D+ + + +L
Sbjct: 606 LYTGCNDKTVKVWDMRSYECVKTLSGHTRAIKSVCAMGN---LLFSGSN--DQQIYVWNL 660
Query: 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAA 168
L F+GH V +L + + SGS D T+ +WD + +C ++ + R
Sbjct: 661 ATGTILTNFQGHEGWVKTLY--AHNNMLYSGSHDETIRIWDLKTTRCVNTIKCKDRVETL 718
Query: 169 Y-DDQGLVFAVAFGGYIRMFDARKYE 193
+ +QG +FA + G ++++F KYE
Sbjct: 719 HVTNQG-IFAGS-GDWLQVFSHDKYE 742
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 143 (55.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 51/262 (19%), Positives = 119/262 (45%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH- 87
+ + ++G + + ++ S L +AS D+++ ++D +K + V+ C+ +
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARR 162
Query: 88 -PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
P V S +G +++L + ++ F+ + +V++++ + D ISG +D +
Sbjct: 163 GPQLVCTGSDDG---TVKLWDIRKKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIK 218
Query: 147 LWDQRAEKCQGLLR--VQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203
+WD R K +R + +G + + A +R++D R + +
Sbjct: 219 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 278
Query: 204 GDIS--DANVVK--FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259
G++ + N+++ +S DG + + + ++V D+ +L Y + P S E +F
Sbjct: 279 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL--YKL-PGHAGSINEVAF 335
Query: 260 SPEGMFVISGSGDGSVYAWSVR 281
P+ +IS S D +Y ++
Sbjct: 336 HPDEPIIISASSDKRLYMGEIQ 357
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 60/257 (23%), Positives = 113/257 (43%)
Query: 80 DLVCFTSHPTTVIYSSKNGWDESLRLLSLH-DNKYLRYFKGHHDRVVSLSLCSSKDCFIS 138
++ C HP +S G+D + L +++ D KGH V+ L + S
Sbjct: 68 EVYCCKFHPNGSTLASA-GFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFS 126
Query: 139 GSLDRTVLLWDQRAEKCQGLLRVQGRPA---AAYDDQ-G--LVFAVAFGGYIRMFDARKY 192
S D+TV +WD +E + + R++G + + Y + G LV + G ++++D RK
Sbjct: 127 ASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK- 183
Query: 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252
K F + V F++ ++ ++ I V D + L TY ++ + +
Sbjct: 184 -KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA-D 236
Query: 253 STLEASFSPEGMFVISGSGDGSVYAWSVR--SGKE----VASWMSFDTEPPVIK--WTPG 304
S S S EG +++S + D +V W VR + KE + + E +++ W+P
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 296
Query: 305 SLMFVTGSSELSFWIPD 321
GS++ ++ D
Sbjct: 297 GSKIAAGSADRFVYVWD 313
>UNIPROTKB|A8XEN7 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0008340 "determination
of adult lifespan" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008340 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:HE601540 ProteinModelPortal:A8XEN7
STRING:A8XEN7 EnsemblMetazoa:CBG11954 WormBase:CBG11954
Uniprot:A8XEN7
Length = 554
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 42 FHKSSSYLVTASDDESIRLYDVTAATCLKTI-NSKKYGVDLVCFTSHPTTVIYSS-KNG- 98
F S +V + + SI ++DV ++TI N+ + V+ VCF + + +IYS+ +G
Sbjct: 255 FSDDSEQIVCGTSEYSIHVFDVEQRRRIRTIVNAHEDDVNSVCFADYGSNLIYSAGDDGL 314
Query: 99 ---WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
WD+ R S D + F GH D V + + +S S D+T+ +WD R C
Sbjct: 315 VKVWDK--RAWSDGDVIPVGVFAGHRDGVTYVDSRQDERYLLSNSKDQTIKVWDLRKFSC 372
Query: 156 QGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVV--K 213
QG + R + A G + +G + ++ G +V K
Sbjct: 373 QGGVEAT-RACVQSQHWDYRWQPAPPGLCQPV------QGDTSVMTLRGHSVLHTLVRAK 425
Query: 214 FS--NDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270
FS N GR + T G I V D GT+ + +K + E + P+ ++S S
Sbjct: 426 FSPENTGRRFIYTGCARGEIVVYDIVTGTV--SRRLKG-HQAVVRECDWHPQENEIVSTS 482
Query: 271 GDG--SVYAWSVRSGKEVASW 289
DG +V+ W R+ +A +
Sbjct: 483 WDGVTTVWTWDERAEGVIAPY 503
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 37/138 (26%), Positives = 62/138 (44%)
Query: 21 LQSMEVGMSFRDYNGRISSMD---FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY 77
L S + R Y G + +D FH +S+YL T S D+++RL+ ++ +
Sbjct: 410 LWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRG 469
Query: 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI 137
V + F+ + Y + G D+ L+L L + +GH D + SL+
Sbjct: 470 PVLALAFSPNGK---YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA 526
Query: 138 SGSLDRTVLLWDQRAEKC 155
S S+D +V +WD R C
Sbjct: 527 SASMDNSVRVWDIRNTYC 544
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 62/232 (26%), Positives = 98/232 (42%)
Query: 14 LELSEEILQSMEVGMSF-RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI 72
L+ EE S M R + G + S F SS L++ S+D SIR +D+ + T
Sbjct: 321 LDEEEEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLY 380
Query: 73 NSKKYGV-DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-LRYFKGHHDRVVSLSLC 130
Y V DL P ++ ++S + D + RL S D Y LR + GH V +
Sbjct: 381 QGHAYPVWDL---DISPCSLYFASASH-DRTARLWSF-DRTYPLRIYAGHLLDVDCVKFH 435
Query: 131 SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAFGGYIRMFD 188
+ + +GS D+TV LW + L P A A+ G A A G R+
Sbjct: 436 PNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASA-GEDQRL-- 492
Query: 189 ARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT 239
+ ++ ++ + G + + FS D L+ +M+ + V D R T
Sbjct: 493 -KLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWD-IRNT 542
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 143 (55.4 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 44/175 (25%), Positives = 84/175 (48%)
Query: 6 SEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA 65
S +DK +++L ++ S E S+ ++ G ++ +DFH S + + A D +++++DV
Sbjct: 193 SASDDK-TVKLWDKT--SRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRT 249
Query: 66 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 125
L+ V+ + F HP+ + + D +L++L L + + L GH
Sbjct: 250 HRLLQHYQLHSAAVNALSF--HPSGNYLVTASS-DSTLKILDLMEGRLLYTLHGHQGPAT 306
Query: 126 SLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ-G-LLRVQGRPAAAYDDQGLVFAV 178
+++ + + F SG D V++W + G +LRVQ PA G + AV
Sbjct: 307 TVAFSRTGEYFASGGSDEQVMVWKSNFDVIDYGEVLRVQRPPATLASSSGTLPAV 361
Score = 133 (51.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 53/253 (20%), Positives = 98/253 (38%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F + ++ ++F S L + S D+++R++ + V V F S
Sbjct: 88 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQ 147
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+ + +S D+++++ S H K+L H + V +S S D+TV LWD
Sbjct: 148 SFVTASD---DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Query: 150 QRAEKCQGLLRVQGRPAAAYD--DQGLVFAVA-FGGYIRMFDARKYEK-GPFDIFSVGGD 205
+ + +C G D G A A ++++D R + + + S
Sbjct: 205 KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAA-- 262
Query: 206 ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265
N + F G ++ + + + +LD G LL T + + +FS G +
Sbjct: 263 ---VNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGH---QGPATTVAFSRTGEY 316
Query: 266 VISGSGDGSVYAW 278
SG D V W
Sbjct: 317 FASGGSDEQVMVW 329
Score = 123 (48.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 48/209 (22%), Positives = 82/209 (39%)
Query: 117 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAA--YDDQGL 174
F GH D V ++ S SGS D+TV +W + + R + + G
Sbjct: 88 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQ 147
Query: 175 VFAVAFGGY-IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVL 233
F A I+++ + + F +FS+ I+ KFS DGRL++ + + + +
Sbjct: 148 SFVTASDDKTIKVWSTHRQK---F-LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 203
Query: 234 DSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFD 293
D + +Y F P G V + D +V W VR+ + + +
Sbjct: 204 DKTSRECVHSYCEHG---GFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHS 260
Query: 294 TEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
+ + P VT SS+ + I DL
Sbjct: 261 AAVNALSFHPSGNYLVTASSDSTLKILDL 289
Score = 123 (48.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 54/288 (18%), Positives = 116/288 (40%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F+ + ++ +DF + L + S D + ++ + + K V V F+ P+
Sbjct: 46 FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS--PS 103
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+ +S + D+++R+ + F+ H V S+ CS F++ S D+T+ +W
Sbjct: 104 GHLLASGSR-DKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWS 162
Query: 150 QRAEKCQGLL--RVQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
+K L + A + G L+ + + ++++D E GG +
Sbjct: 163 THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC-VHSYCEHGGFV 221
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 266
+ V F G + M+ + V D LL Y + + N+ SF P G ++
Sbjct: 222 T---YVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL---SFHPSGNYL 275
Query: 267 ISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
++ S D ++ + G+ + + + ++ F +G S+
Sbjct: 276 VTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 323
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 142 (55.0 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 62/279 (22%), Positives = 117/279 (41%)
Query: 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC--LKT 71
LEL + M M + + G I + F S+L +A D+ I L++V C
Sbjct: 16 LELPKRTSSLMAPTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGE-CENFAV 74
Query: 72 INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS 131
+ K + V F + + ++ + G D+++R+ + +R FK H D V S+ +
Sbjct: 75 LKGHKGAIMEVKFNADSSHLVSA---GTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNR 131
Query: 132 SKDCFI-SGSLDRTVLLWDQRA-EKCQGLLRVQGRPAAAYDDQG-LVFAVAFGGYIRMFD 188
I S S D TV++ D R+ E + + + A ++D V I+++D
Sbjct: 132 RGPQMICSASDDGTVMVHDMRSKEAAKKFICKYQQTAVTFNDAADNVICGGIDNQIKVWD 191
Query: 189 ARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD--SFRGTLLSTYNV 246
+ + + + G + S++G +L +M+ + D F
Sbjct: 192 MLRNDVR----YVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARY 247
Query: 247 KPVSRN---STLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ S N + L+ +SP ++ +GS D VY W+ +S
Sbjct: 248 QGASHNFEKNLLKCGWSPRDNYITAGSADRFVYVWNAKS 286
>WB|WBGene00004265 [details] [associations]
symbol:qui-1 species:6239 "Caenorhabditis elegans"
[GO:0050913 "sensory perception of bitter taste" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 HSSP:P16649
GO:GO:0050913 GeneTree:ENSGT00700000104282 EMBL:AL021487 PIR:T26919
RefSeq:NP_502613.2 ProteinModelPortal:O62471 SMR:O62471
STRING:O62471 PaxDb:O62471 EnsemblMetazoa:Y45F10B.10 GeneID:178326
KEGG:cel:CELE_Y45F10B.10 UCSC:Y45F10B.10 CTD:178326
WormBase:Y45F10B.10a HOGENOM:HOG000016418 InParanoid:O62471
OMA:MARDSEQ NextBio:900668 Uniprot:O62471
Length = 1592
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 61/281 (21%), Positives = 116/281 (41%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L++ EV SF D+ G + S+ ++ +L+T S D ++++DVT C+ + V
Sbjct: 982 LETGEVMRSFNDHTGSVVSLQLTSNNQFLITGSGDFVVQMWDVTNGKCISRMGGLMAPVS 1041
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
+ TS+ V+ + + DE+L++ S + L GH +V SL +C+ DC + +
Sbjct: 1042 TLAITSNDAFVVVACE---DETLKVFSTVGGQELHELMGHEGKVNSL-VCAQDDCQLFAA 1097
Query: 141 LDRTVLLWD-QRAEKCQGLLRVQGRPAAAYD-DQGLVFAVA-FGGYIRMFDARKYEKGPF 197
V +D + L Q P + F ++ G + +++ K
Sbjct: 1098 TKSKVFCYDIHNGQMIDVLDTAQPFPICSLKISSDNYFLISPCGPKVTIWNVTKRNHDAH 1157
Query: 198 DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD-SFRGTLLSTYNVK--PVSRNST 254
D+ + A V SND + T G + + D + +T K P++
Sbjct: 1158 DVHADKEGFLTA--VALSNDDKYAACGTNNGIVALWDLEVCQCVFTTIQNKGDPITC--- 1212
Query: 255 LEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTE 295
+S + + ISG+ G + ++G V +E
Sbjct: 1213 --IRYSVDSQYCISGNQAGCILILDAQNGGVVRELFMHSSE 1251
Score = 128 (50.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 63/296 (21%), Positives = 115/296 (38%)
Query: 3 GSQSEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYD 62
G+QS+ + ++ E L +G +F+ + ++ + SS V+ S D+++ ++
Sbjct: 885 GNQSDPGVIYAYHIASEQL----IG-TFKGHTAAVTCLCSSNDSSLFVSTSFDKTVNVWV 939
Query: 63 VTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHD 122
+ +T ++ V TS +I +S D S +++ L + +R F H
Sbjct: 940 FSQSTPTMSLTHHTAKVTCAILTSDDQYLITASA---DSSAKMIKLETGEVMRSFNDHTG 996
Query: 123 RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC---QGLLRVQGRPAAAYDDQGLVFAVA 179
VVSL L S+ I+GS D V +WD KC G L A + V
Sbjct: 997 SVVSLQLTSNNQFLITGSGDFVVQMWDVTNGKCISRMGGLMAPVSTLAITSNDAFVVVAC 1056
Query: 180 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT 239
+++F G ++ + G N + + D L + + D G
Sbjct: 1057 EDETLKVFST----VGGQELHELMGHEGKVNSLVCAQDD-CQLFAATKSKVFCYDIHNGQ 1111
Query: 240 LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTE 295
++ + +L+ S + F+IS G V W+V A + D E
Sbjct: 1112 MIDVLDTAQPFPICSLK--ISSDNYFLISPCGP-KVTIWNVTKRNHDAHDVHADKE 1164
Score = 51 (23.0 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 266 VISGSGDGSVYAWSVRSGKEVAS 288
V+SG+ D + W+V+SG V +
Sbjct: 1393 VVSGARDEKIIVWNVQSGDMVCT 1415
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 145 (56.1 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 35/167 (20%), Positives = 74/167 (44%)
Query: 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTT 90
R + ++ + H + YL+++S+D+ D+ L + + G L C HP
Sbjct: 304 RAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDG 363
Query: 91 VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQ 150
+I+ + G D +++ L + + F GH V +++ + +G+ D ++ LWD
Sbjct: 364 LIFGTGTG-DSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWDL 422
Query: 151 RAEKCQGLLRVQGR---PAAAYDDQGLVFAVAFGGYIRMFDARKYEK 194
R K + + + +D G AV G IR++ +++ +
Sbjct: 423 RKLKNFKTITLDNNYEVKSLVFDQSGTYLAVG-GSDIRVYICKQWSE 468
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 43/206 (20%), Positives = 89/206 (43%)
Query: 124 VVSLSLC-SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAA---YDDQGLVFAVA 179
++SL LC + + ++G D+ V+++D+R E+ L+ + ++ + Q +VF+ +
Sbjct: 225 ILSLDLCPTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSAS 284
Query: 180 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT 239
IR++ G + V S + G +L ++ + + D G
Sbjct: 285 SDSTIRVWSVT----GGNCVQVVRAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGR 340
Query: 240 LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVI 299
+L+ + T A F P+G+ +G+GD + W ++ VA++ I
Sbjct: 341 VLTKVTDETAGCALTC-AQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAI 399
Query: 300 KWTPGSLMFVTGSSELSFWIPDLSKL 325
++ TG+ + S + DL KL
Sbjct: 400 AFSENGYYLATGAQDSSLKLWDLRKL 425
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 154 (59.3 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 60/232 (25%), Positives = 100/232 (43%)
Query: 62 DVTAATC-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD-ESLRLLSLHDNKYLRYFKG 119
D+ + C L +N +K+G +L H +V +G D E++RL + +G
Sbjct: 677 DLPSWICQLPKVN-EKWGAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEG 735
Query: 120 HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVF 176
H V+S++ SGS D+TV LWD Q LR R A D L+
Sbjct: 736 HSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLA 795
Query: 177 AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 236
+ +F +R++D G ++ G V FS DGRL+ + + + + D
Sbjct: 796 SGSFDKTVRLWDPAT---GSLQQ-TLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPA 851
Query: 237 RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVAS 288
GTL T +K + E FS +G ++ + G ++ + R G ++S
Sbjct: 852 TGTLQQTLIIK----GTVTELQFSQDGSYISTNLGSLNIQS---RCGNNLSS 896
Score = 136 (52.9 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 55/217 (25%), Positives = 99/217 (45%)
Query: 33 YNGRISSMDFHKSSSYLVTAS--DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTT 90
+ + +++ H +S + V AS DDE++RL+D + +T+ V V F+ P
Sbjct: 692 WGAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFS--PDG 749
Query: 91 VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQ 150
+ +S +D+++RL + +GH + V S++ SGS D+TV LWD
Sbjct: 750 RLLAS-GSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDP 808
Query: 151 RAEKCQGLLRVQG---RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFD-IFSVGGDI 206
Q LR R A D L+ + +F +R++D G + G +
Sbjct: 809 ATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPAT---GTLQQTLIIKGTV 865
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLST 243
++ ++FS DG ++T G +++ S G LS+
Sbjct: 866 TE---LQFSQDGSY--ISTNLGSLNI-QSRCGNNLSS 896
Score = 38 (18.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 35 GRISSMDFHKSSSYLVTA----SDDESIRLYDVTAATCLKTI 72
GR MDF K + A SD + ++ T L+ I
Sbjct: 145 GRAQDMDFEKLEGVMEAAFESFSDRDEVQCLQGTRTVLLQQI 186
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 142 (55.0 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 51/262 (19%), Positives = 117/262 (44%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH- 87
+ + ++G + + ++ S L +AS D+++ ++D +K + V+ CF +
Sbjct: 94 TLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNS-CFPARR 152
Query: 88 -PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
P S +G +++L + + F+ + +V+S++ + D ISG +D +
Sbjct: 153 GPQLACTGSDDG---TVKLWDIRKKASVHTFQNTY-QVLSVTFNDTSDQIISGGIDNDIK 208
Query: 147 LWDQRAEKCQGLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203
+WD R K ++ G D + + + +R++D R + +
Sbjct: 209 VWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQ 268
Query: 204 GDIS--DANVVK--FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259
G++ + N+++ +S DG + + + +++ D+ ++ Y + P S E +F
Sbjct: 269 GNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIV--YKL-PGHAGSVNEVAF 325
Query: 260 SPEGMFVISGSGDGSVYAWSVR 281
PE V+SGS D +Y ++
Sbjct: 326 HPEEPIVLSGSSDKRLYIGEIQ 347
Score = 122 (48.0 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 63/305 (20%), Positives = 121/305 (39%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY-GVDLVCFTS 86
M + G + FH + + L ++ D I +++V C K + G + +
Sbjct: 50 MLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYG-DCENYATLKGHSGAVMELHYN 108
Query: 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS-LSLCSSKDCFISGSLDRTV 145
++++S+ D+++ + + ++ KGH V S +GS D TV
Sbjct: 109 TDGSLLFSAST--DKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTV 166
Query: 146 LLWDQRAEKCQGLLR--VQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203
LWD R + + Q D + + I+++D R+ + I+S+
Sbjct: 167 KLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKL----IYSMQ 222
Query: 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLD--SF----RGTLLSTYNVKPVSRNSTLEA 257
G + S DG +L +M+ + V D F R + NV +N L
Sbjct: 223 GHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKN-LLRC 281
Query: 258 SFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSF 317
S+S +G + +GS D VY W + + V + + P + ++GSS+
Sbjct: 282 SWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRL 341
Query: 318 WIPDL 322
+I ++
Sbjct: 342 YIGEI 346
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 143 (55.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 52/185 (28%), Positives = 82/185 (44%)
Query: 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK--DCFISGSLDRTVLLWDQRAEKCQG 157
D + L + + L+ F GH V+ L L S+ + F+SG D+ ++WD R+ +C
Sbjct: 217 DGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQ 276
Query: 158 LLRVQGRP--AAAYDDQGLVFAVAFG-GYIRMFDARKYEKGPFDIFSVGGDISDANVVKF 214
+ Y G FA R++D R + I+S I A+ V F
Sbjct: 277 AFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADRE--VAIYSKESIIFGASSVDF 334
Query: 215 SNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS 274
S GRL+ + I+V D +G+ +S +R STL S P+G SGS D +
Sbjct: 335 SLSGRLLFAGYNDYTINVWDVLKGSRVSIL-FGHENRVSTLRVS--PDGTAFCSGSWDHT 391
Query: 275 VYAWS 279
+ W+
Sbjct: 392 LRVWA 396
Score = 132 (51.5 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 54/221 (24%), Positives = 93/221 (42%)
Query: 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAY 169
K R KGH ++V+ + C K +S S D V++WD + + + A AY
Sbjct: 96 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY 155
Query: 170 DDQGLVFAVAFGG-------YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLML 222
G A+A GG Y FD K E SV + + F+N +
Sbjct: 156 APSGC--AIACGGLDNKCSVYPLTFD--KNENMAAKKKSVAMHTNYLSACSFTNSDMQQI 211
Query: 223 LTTM-EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 281
LT +G + D G LL +++ L+ + S G +SG D W +R
Sbjct: 212 LTASGDGTCALWDVESGQLLQSFHGHGADV-LCLDLAPSETGNTFVSGGCDKKAMVWDMR 270
Query: 282 SGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
SG+ + ++ + +++ +++ P F +GS + + + DL
Sbjct: 271 SGQCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDL 311
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 37 ISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT-TVIYS 94
+S+ F S ++TAS D + L+DV + L++ + +G D++C P+ T
Sbjct: 198 LSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSETGNTF 255
Query: 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
G D+ + + + ++ F+ H + S+ S D F SGS D T L+D RA++
Sbjct: 256 VSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADR 315
>ASPGD|ASPL0000077901 [details] [associations]
symbol:AN4648 species:162425 "Emericella nidulans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 GO:GO:0030529 EMBL:BN001303 EMBL:AACD01000079
GO:GO:0006364 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK
RefSeq:XP_662252.1 ProteinModelPortal:Q5B482 STRING:Q5B482
EnsemblFungi:CADANIAT00005783 GeneID:2872446 KEGG:ani:AN4648.2
OrthoDB:EOG4T4H3P Uniprot:Q5B482
Length = 541
Score = 145 (56.1 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 58/255 (22%), Positives = 105/255 (41%)
Query: 41 DFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFT-SHPTTVIYSSKNGW 99
D LV D +++++DV + LKT K V + F+ S PT V+ +S
Sbjct: 103 DVRPDGRILVAGDDTGTLQVFDVGSRAILKTWKDHKQPVWVAKFSPSDPTCVLSASD--- 159
Query: 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLC----SSKDCFISGSLDRTVLLWDQRAEKC 155
D ++RL L ++ F GH D V + + +S +SGS DRTV LWD R E
Sbjct: 160 DRTVRLWDLPSENSIKSFVGHSDYVRTAAFMPGSLASSGSLVSGSYDRTVRLWDPRMEGR 219
Query: 156 QGLLRVQGRPAAAYDDQ--GLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
+ G P G A I + D + P + + +
Sbjct: 220 SAMTFKMGAPLETVLPMPTGTTVLAAADNKIAVLDIVAGK--PLHM--IQSHQKTVTSLS 275
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK-PVSRNSTLEASFSPEGMFVISGSGD 272
++DG +L ++GH+ + ++ +++ + + P+ + + + E + G
Sbjct: 276 LASDGTRLLSGALDGHLKIHETTGWNVVAGFKYQSPILSLCAITSGAAREDKHIAVGMQS 335
Query: 273 GSVYAWSVRSGKEVA 287
G + + SG++ A
Sbjct: 336 GLLSIKTRLSGQQKA 350
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 143 (55.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 58/282 (20%), Positives = 112/282 (39%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F + ++ ++F S L + S D+++R++ + V V F S
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+++ +S D+++++ S H ++L H + V +S S D+TV LWD
Sbjct: 117 SLVTASD---DKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 150 QRAEKCQGLLRVQGRPAAAYD--DQGLVFAVA-FGGYIRMFDARKYEK-GPFDIFSVGGD 205
+ + +C G D G A A ++++DAR + + + S
Sbjct: 174 KTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAA-- 231
Query: 206 ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265
N + F G ++ + + + +LD G LL T + + +FS G +
Sbjct: 232 ---VNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH---QGPATTVAFSRTGEY 285
Query: 266 VISGSGDGSVYAWSVRSGKEVASWMSFDTE-PPVIKWTPGSL 306
SG D V W +S ++ + PP + + G+L
Sbjct: 286 FASGGSDEQVMVW--KSNFDIVDYGDMKARRPPPLTSSSGTL 325
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 54/288 (18%), Positives = 119/288 (41%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F+ + ++ +DF ++ +L + S D ++ ++ + + K V V F+ P+
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS--PS 72
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+ +S + D+++R+ + F+ H V S+ CS ++ S D+TV +W
Sbjct: 73 GHLLASGSR-DKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWS 131
Query: 150 QRAEKCQGLL--RVQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
++ L + A + G L+ + + ++++D E GG +
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC-IHSYCEHGGFV 190
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 266
+ V F G + M+ + V D+ LL Y + + N+ SF P G ++
Sbjct: 191 T---YVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNAL---SFHPSGNYL 244
Query: 267 ISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
I+ S D ++ + G+ + + + ++ F +G S+
Sbjct: 245 ITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 33/143 (23%), Positives = 70/143 (48%)
Query: 6 SEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA 65
S +DK +++L ++ S E S+ ++ G ++ +DFH S + + A D +++++D
Sbjct: 162 SASDDK-TVKLWDKT--SRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDART 218
Query: 66 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 125
L+ V+ + F HP+ + + D +L++L L + + L GH
Sbjct: 219 HRLLQHYQLHSAAVNALSF--HPSGNYLITASS-DSTLKILDLMEGRLLYTLHGHQGPAT 275
Query: 126 SLSLCSSKDCFISGSLDRTVLLW 148
+++ + + F SG D V++W
Sbjct: 276 TVAFSRTGEYFASGGSDEQVMVW 298
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 48/227 (21%), Positives = 87/227 (38%)
Query: 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL 159
D +L + + F GH D V ++ S SGS D+TV +W + +
Sbjct: 40 DSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 99
Query: 160 RVQGRPAAAY----DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFS 215
R + D Q LV A + ++++ + F +FS+ I+ KFS
Sbjct: 100 RAHTATVRSVHFCSDGQSLVTA-SDDKTVKVWSTHRQR---F-LFSLTQHINWVRCAKFS 154
Query: 216 NDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSV 275
DGRL++ + + + + D + +Y F P G + + D +V
Sbjct: 155 PDGRLIVSASDDKTVKLWDKTSRECIHSYCEHG---GFVTYVDFHPSGTCIAAAGMDNTV 211
Query: 276 YAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
W R+ + + + + + P +T SS+ + I DL
Sbjct: 212 KVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 143 (55.4 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 37/136 (27%), Positives = 71/136 (52%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F D G + +DF+ S + + +A D++++++DV L+ GV+ C + HP
Sbjct: 139 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN--CISFHP 196
Query: 89 TT--VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
+ +I +S +G +L++L L + + + +GH V ++S + F SG D VL
Sbjct: 197 SGNYLITASSDG---TLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 253
Query: 147 LWDQRAEK--CQGLLR 160
LW ++ C+GL +
Sbjct: 254 LWRTNFDELHCKGLTK 269
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 52/216 (24%), Positives = 84/216 (38%)
Query: 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW--DQRAEKCQGLLRVQGRPA 166
H Y RY GH D V S+ + S S DRTV LW D+R + + + P
Sbjct: 8 HARAY-RYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE--FKAHTAPV 63
Query: 167 AAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM 226
+ D +A + + F ++S+ KFS DGRL++ +
Sbjct: 64 RSVDFSADGQFLATASEDKSIKVWSMYRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSE 122
Query: 227 EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV 286
+ I + D+ ++ ++ N F+P G + S D +V W VR K +
Sbjct: 123 DKTIKIWDTTNKQCVNNFSDSVGFANFV---DFNPSGTCIASAGSDQTVKVWDVRVNKLL 179
Query: 287 ASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
+ I + P +T SS+ + I DL
Sbjct: 180 QHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 215
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 54/248 (21%), Positives = 100/248 (40%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
++S+ F + L +AS D ++RL+ + V V F++ + +S+
Sbjct: 21 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 80
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D+S+++ S++ ++L H V +S S D+T+ +WD ++C
Sbjct: 81 ---DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV 137
Query: 157 GLLR--VQGRPAAAYDDQGLVFAVAFGGY-IRMFDARKYEK-GPFDIFSVGGDISDANVV 212
V ++ G A A ++++D R + + + S GG N +
Sbjct: 138 NNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS-GG----VNCI 192
Query: 213 KFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGMFVISGS 270
F G ++ + +G + +LD G L+ T + PV SFS G SG
Sbjct: 193 SFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV-----FTVSFSKGGELFASGG 247
Query: 271 GDGSVYAW 278
D V W
Sbjct: 248 ADTQVLLW 255
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 145 (56.1 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 72/294 (24%), Positives = 116/294 (39%)
Query: 42 FHKSSSYLVTASDDESIRLYDVTAA--TC-LKTINSKKYGVDL----VCFTSHPTTVIYS 94
F Y+ T + S +++DV C L+ N+ G DL VCF+ Y
Sbjct: 307 FSADGKYVATGCN-RSAQIFDVNTGEKVCVLQDDNADTTG-DLYIRSVCFSPDGK---YL 361
Query: 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
+ D+ +R+ + F GH + SL SGS DRTV LWD
Sbjct: 362 ATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGT 421
Query: 155 CQGLLRVQ-GRPAAAYD-DQGLVFAVAFGGYIRMFDARK---YEK--GPF----DIFSVG 203
+ ++ G A D V A + +R++D + E+ GP ++SV
Sbjct: 422 ALTVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVA 481
Query: 204 GDISDANVVKFSNDGRLML--LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP 261
+ ++V S D + L L T G++ S G + T+ R+ L + +P
Sbjct: 482 FSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGH---RDFVLSVALTP 538
Query: 262 EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSEL 315
+ +V+SGS D V W R+G + +P F TGS ++
Sbjct: 539 DNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDM 592
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/141 (27%), Positives = 70/141 (49%)
Query: 26 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFT 85
+ + F + I S+DF + + + S D ++RL+D+ T L T+ + + GV V +
Sbjct: 380 IRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTAL-TVFTIEDGVTTVAIS 438
Query: 86 SHPTTVIYSSKNGWDESLRLLSLHDN---KYLRYFKGHHDRVVSLSLCSSKDCFISGSLD 142
P T Y + D+S+R+ L + L GH D V S++ + ++GSLD
Sbjct: 439 --PDTK-YVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLD 495
Query: 143 RTVLLWDQRAEKCQGLLRVQG 163
+T+ LW+ + G ++ QG
Sbjct: 496 KTIKLWELATPR--GNMQNQG 514
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 66/266 (24%), Positives = 112/266 (42%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
I S+ F YL T ++D+ IR++D+T T + + + F T+ +S
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTI--ASG 406
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
+G D ++RL + + L F D V ++++ +GSLD++V +WD + C
Sbjct: 407 SG-DRTVRLWDIENGTALTVFT-IEDGVTTVAISPDTKYVAAGSLDKSVRVWDL-TQGCP 463
Query: 157 GLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGP--FDIFSVGGDISDANVVKF 214
+ R++G P D V++VAF R +K +++ + G++ +
Sbjct: 464 -VERLEG-PDGHKDS---VYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQG---- 514
Query: 215 SNDGRLMLLTTMEGHIHVLDSF---------------RGTLL------STYNVKPVSRNS 253
S GR + T EGH + S RG ST + +NS
Sbjct: 515 SKGGRCV--KTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNS 572
Query: 254 TLEASFSPEGMFVISGSGDGSVYAWS 279
+ + SP G F +GSGD WS
Sbjct: 573 VISVAPSPTGGFFATGSGDMRARIWS 598
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 137 (53.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV--CFTSH 87
F +++G + +DFHK V+ DD I++++ CL T+ +D + F H
Sbjct: 47 FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH---LDYIRTTFFHH 103
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
I S+ + D+++R+ + + GH+ V+ S+D +S SLD+TV +
Sbjct: 104 EYPWILSASD--DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRV 161
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDD-QGLVFAVAFG 181
WD GL + P A D +G+ FG
Sbjct: 162 WD-----ISGLRKKNLSPGAVESDVRGITGVDLFG 191
Score = 57 (25.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 257 ASFSPEGMFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
A+F P ++SG+ D V W + K EV + + P + ++ S +
Sbjct: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270
Query: 315 LSFWIPDLSK 324
S + D+SK
Sbjct: 271 KSIRVWDMSK 280
Score = 45 (20.9 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAW--SVRSG 283
N+ A F P ++S S D S+ W S R+G
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTG 283
>MGI|MGI:1329037 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005102 "receptor binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1329037 EMBL:AF096285 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005102
GO:GO:0005681 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
ChiTaRS:STRAP EMBL:AK075804 EMBL:AK077504 EMBL:AK145971
EMBL:AK152283 IPI:IPI00918973 RefSeq:NP_035629.2 UniGene:Mm.22584
ProteinModelPortal:Q9Z1Z2 SMR:Q9Z1Z2 STRING:Q9Z1Z2
PhosphoSite:Q9Z1Z2 REPRODUCTION-2DPAGE:IPI00130670
REPRODUCTION-2DPAGE:Q9Z1Z2 PaxDb:Q9Z1Z2 PRIDE:Q9Z1Z2
Ensembl:ENSMUST00000064910 GeneID:20901 KEGG:mmu:20901
NextBio:299765 Bgee:Q9Z1Z2 Genevestigator:Q9Z1Z2
GermOnline:ENSMUSG00000030224 Uniprot:Q9Z1Z2
Length = 350
Score = 141 (54.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 60/265 (22%), Positives = 105/265 (39%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F + G + +K ++ TA+ D + +++D + L T+ + K+ V V FT
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDS 112
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
Y G D+ LR+ L+ + + GH + CS +S D+TV L
Sbjct: 113 N---YLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSDDKQILSAD-DKTVRL 168
Query: 148 WDQRA-EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
WD + + L + Y +G + + +G I A E P F I
Sbjct: 169 WDHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLE--PIKSFEAPATI 226
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGM 264
+ A++ + ++ + ++ D G L +Y + P+ FSP+G
Sbjct: 227 NSASL---HPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHC-----VRFSPDGE 278
Query: 265 FVISGSGDGSVYAWSVRSGKEVASW 289
SGS DG++ W GK W
Sbjct: 279 LYASGSEDGTLRLWQTVVGKTYGLW 303
>RGD|1311114 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005102 "receptor binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030054 "cell
junction" evidence=ISO] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1311114 GO:GO:0005739 GO:GO:0005886 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:BC083714 IPI:IPI00364585 RefSeq:NP_001011969.1
UniGene:Rn.228807 ProteinModelPortal:Q5XIG8 IntAct:Q5XIG8
STRING:Q5XIG8 PRIDE:Q5XIG8 Ensembl:ENSRNOT00000009923 GeneID:297699
KEGG:rno:297699 UCSC:RGD:1311114 InParanoid:Q5XIG8 NextBio:642559
Genevestigator:Q5XIG8 Uniprot:Q5XIG8
Length = 350
Score = 141 (54.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 60/265 (22%), Positives = 105/265 (39%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F + G + +K ++ TA+ D + +++D + L T+ + K+ V V FT
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDS 112
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
Y G D+ LR+ L+ + + GH + CS +S D+TV L
Sbjct: 113 N---YLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRL 168
Query: 148 WDQRA-EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
WD + + L + Y +G + + +G I A E P F I
Sbjct: 169 WDHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLE--PIKSFEAPATI 226
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGM 264
+ A++ + ++ + ++ D G L +Y + P+ FSP+G
Sbjct: 227 NSASL---HPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHC-----VRFSPDGE 278
Query: 265 FVISGSGDGSVYAWSVRSGKEVASW 289
SGS DG++ W GK W
Sbjct: 279 LYASGSEDGTLRLWQTVVGKTYGLW 303
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 61/283 (21%), Positives = 110/283 (38%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F + ++ ++F S L + S D+++R++ + V V F S
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+++ +S D+++++ S H K+L H + V +S S D+TV LWD
Sbjct: 117 SLVTASD---DKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD 173
Query: 150 QRAEKCQGLLRVQGRPAAAYD--DQGLVFAVA-FGGYIRMFDARKYEK-GPFDIFSVGGD 205
+ + +C G D G A A ++++D R + + + S
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAA-- 231
Query: 206 ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265
N + F G +L + + + +LD G LL T + + +FS G +
Sbjct: 232 ---VNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGH---QGPATTVAFSRTGEY 285
Query: 266 VISGSGDGSVYAWSVRSGKEVASWMSFDT--EPPVIKWTPGSL 306
SG D V W +S +V + PP T G+L
Sbjct: 286 FASGGSDEQVMVW--KSNFDVVDYREVIKVHRPPAPLATSGNL 326
Score = 132 (51.5 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 42/177 (23%), Positives = 85/177 (48%)
Query: 6 SEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA 65
S +DK +++L ++ S E S+ ++ G ++ +DFH S + + AS D +++++DV
Sbjct: 162 SASDDK-TVKLWDKT--SRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRT 218
Query: 66 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 125
L+ V+ + F HP+ + + D +L++L L + + L GH
Sbjct: 219 HRLLQHYQLHSAAVNALSF--HPSGNYLLTASS-DSTLKILDLMEGRLLYTLHGHQGPAT 275
Query: 126 SLSLCSSKDCFISGSLDRTVLLWDQRAEKC--QGLLRVQGRPAAAYDDQGLVFAVAF 180
+++ + + F SG D V++W + + +++V RP A G + V F
Sbjct: 276 TVAFSRTGEYFASGGSDEQVMVWKSNFDVVDYREVIKVH-RPPAPLATSGNLPEVDF 331
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 56/288 (19%), Positives = 118/288 (40%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F+ + I+S+DF ++ L + S D + ++ + + K V V F+ P+
Sbjct: 15 FKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFS--PS 72
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+ +S + D+++R+ + F+ H V S+ CS ++ S D+TV +W
Sbjct: 73 GHLLASGSR-DKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWS 131
Query: 150 QRAEKCQGLL--RVQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
+K L + A + G L+ + + ++++D E GG +
Sbjct: 132 THRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSREC-VHSYCEHGGFV 190
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 266
+ V F G + +M+ + V D LL Y + + N+ SF P G ++
Sbjct: 191 T---YVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNAL---SFHPSGNYL 244
Query: 267 ISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
++ S D ++ + G+ + + + ++ F +G S+
Sbjct: 245 LTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 47/210 (22%), Positives = 85/210 (40%)
Query: 117 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAY----DDQ 172
F GH D V ++ S SGS D+TV +W + + R + D Q
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 173 GLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHV 232
LV A + ++++ + + F +FS+ I+ +FS DGRL++ + + + +
Sbjct: 117 SLVTA-SDDKTVKVWSTHRQK---F-LFSLSQHINWVRCARFSPDGRLIVSASDDKTVKL 171
Query: 233 LDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF 292
D + +Y F P G + + S D +V W VR+ + + +
Sbjct: 172 WDKTSRECVHSYCEHG---GFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLH 228
Query: 293 DTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
+ + P +T SS+ + I DL
Sbjct: 229 SAAVNALSFHPSGNYLLTASSDSTLKILDL 258
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 141 (54.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 50/262 (19%), Positives = 119/262 (45%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH- 87
+ + ++G + + ++ S L +AS D+++ ++D +K + V+ C+ +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARR 163
Query: 88 -PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
P V S +G +++L + ++ F+ + +V++++ + D ISG +D +
Sbjct: 164 GPQLVCTGSDDG---TVKLWDIRKKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIK 219
Query: 147 LWDQRAEKCQGLLR--VQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203
+WD R K +R + +G + + A +R++D R + +
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 204 GDIS--DANVVK--FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259
G++ + N+++ +S DG + + + ++V D+ +L Y + P S E +F
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL--YKL-PGHAGSINEVAF 336
Query: 260 SPEGMFVISGSGDGSVYAWSVR 281
P+ ++S S D +Y ++
Sbjct: 337 HPDEPIILSASSDKRLYMGEIQ 358
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 60/257 (23%), Positives = 113/257 (43%)
Query: 80 DLVCFTSHPTTVIYSSKNGWDESLRLLSLH-DNKYLRYFKGHHDRVVSLSLCSSKDCFIS 138
++ C HP +S G+D + L +++ D KGH V+ L + S
Sbjct: 69 EVYCCKFHPNGSTLASA-GFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFS 127
Query: 139 GSLDRTVLLWDQRAEKCQGLLRVQGRPA---AAYDDQ-G--LVFAVAFGGYIRMFDARKY 192
S D+TV +WD +E + + R++G + + Y + G LV + G ++++D RK
Sbjct: 128 ASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK- 184
Query: 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252
K F + V F++ ++ ++ I V D + L TY ++ + +
Sbjct: 185 -KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA-D 237
Query: 253 STLEASFSPEGMFVISGSGDGSVYAWSVR--SGKE----VASWMSFDTEPPVIK--WTPG 304
S S S EG +++S + D +V W VR + KE + + E +++ W+P
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 305 SLMFVTGSSELSFWIPD 321
GS++ ++ D
Sbjct: 298 GSKIAAGSADRFVYVWD 314
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 141 (54.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 50/262 (19%), Positives = 119/262 (45%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH- 87
+ + ++G + + ++ S L +AS D+++ ++D +K + V+ C+ +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARR 163
Query: 88 -PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
P V S +G +++L + ++ F+ + +V++++ + D ISG +D +
Sbjct: 164 GPQLVCTGSDDG---TVKLWDIRKKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIK 219
Query: 147 LWDQRAEKCQGLLR--VQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203
+WD R K +R + +G + + A +R++D R + +
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQ 279
Query: 204 GDIS--DANVVK--FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259
G++ + N+++ +S DG + + + ++V D+ +L Y + P S E +F
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL--YKL-PGHAGSINEVAF 336
Query: 260 SPEGMFVISGSGDGSVYAWSVR 281
P+ ++S S D +Y ++
Sbjct: 337 HPDEPIILSASSDKRLYMGEIQ 358
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 60/257 (23%), Positives = 113/257 (43%)
Query: 80 DLVCFTSHPTTVIYSSKNGWDESLRLLSLH-DNKYLRYFKGHHDRVVSLSLCSSKDCFIS 138
++ C HP +S G+D + L +++ D KGH V+ L + S
Sbjct: 69 EVYCCKFHPNGSTLASA-GFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFS 127
Query: 139 GSLDRTVLLWDQRAEKCQGLLRVQGRPA---AAYDDQ-G--LVFAVAFGGYIRMFDARKY 192
S D+TV +WD +E + + R++G + + Y + G LV + G ++++D RK
Sbjct: 128 ASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK- 184
Query: 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252
K F + V F++ ++ ++ I V D + L TY ++ + +
Sbjct: 185 -KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA-D 237
Query: 253 STLEASFSPEGMFVISGSGDGSVYAWSVR--SGKE----VASWMSFDTEPPVIK--WTPG 304
S S S EG +++S + D +V W VR + KE + + E +++ W+P
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPD 297
Query: 305 SLMFVTGSSELSFWIPD 321
GS++ ++ D
Sbjct: 298 GSKIAAGSADRFVYVWD 314
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 141 (54.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 50/262 (19%), Positives = 119/262 (45%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH- 87
+ + ++G + + ++ S L +AS D+++ ++D +K + V+ C+ +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARR 163
Query: 88 -PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
P V S +G +++L + ++ F+ + +V++++ + D ISG +D +
Sbjct: 164 GPQLVCTGSDDG---TVKLWDIRKKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIK 219
Query: 147 LWDQRAEKCQGLLR--VQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203
+WD R K +R + +G + + A +R++D R + +
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 204 GDIS--DANVVK--FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259
G++ + N+++ +S DG + + + ++V D+ +L Y + P S E +F
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL--YKL-PGHAGSINEVAF 336
Query: 260 SPEGMFVISGSGDGSVYAWSVR 281
P+ ++S S D +Y ++
Sbjct: 337 HPDEPIILSASSDKRLYMGEIQ 358
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 60/257 (23%), Positives = 113/257 (43%)
Query: 80 DLVCFTSHPTTVIYSSKNGWDESLRLLSLH-DNKYLRYFKGHHDRVVSLSLCSSKDCFIS 138
++ C HP +S G+D + L +++ D KGH V+ L + S
Sbjct: 69 EVYCCKFHPNGSTLASA-GFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFS 127
Query: 139 GSLDRTVLLWDQRAEKCQGLLRVQGRPA---AAYDDQ-G--LVFAVAFGGYIRMFDARKY 192
S D+TV +WD +E + + R++G + + Y + G LV + G ++++D RK
Sbjct: 128 ASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK- 184
Query: 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252
K F + V F++ ++ ++ I V D + L TY ++ + +
Sbjct: 185 -KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA-D 237
Query: 253 STLEASFSPEGMFVISGSGDGSVYAWSVR--SGKE----VASWMSFDTEPPVIK--WTPG 304
S S S EG +++S + D +V W VR + KE + + E +++ W+P
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 305 SLMFVTGSSELSFWIPD 321
GS++ ++ D
Sbjct: 298 GSKIAAGSADRFVYVWD 314
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 137 (53.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV--CFTSH 87
F +++G + +DFHK V+ DD I++++ CL T+ +D + F H
Sbjct: 47 FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH---LDYIRTTFFHH 103
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
I S+ + D+++R+ + + GH+ V+ S+D +S SLD+TV +
Sbjct: 104 EYPWILSASD--DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRV 161
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDD-QGLVFAVAFG 181
WD GL + P A D +G+ FG
Sbjct: 162 WD-----ISGLRKKNLSPGAVESDVRGITGVDLFG 191
Score = 57 (25.1 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 257 ASFSPEGMFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
A+F P ++SG+ D V W + K EV + + P + ++ S +
Sbjct: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270
Query: 315 LSFWIPDLSK 324
S + D+SK
Sbjct: 271 KSIRVWDMSK 280
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAW--SVRSG 283
N+ A F P ++S S D S+ W S R+G
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTG 283
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 37/136 (27%), Positives = 71/136 (52%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F D G + +DF+ S + + +A D++++++DV L+ GV+ C + HP
Sbjct: 181 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN--CISFHP 238
Query: 89 TT--VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
+ +I +S +G +L++L L + + + +GH V ++S + F SG D VL
Sbjct: 239 SGNYLITASSDG---TLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 147 LWDQRAEK--CQGLLR 160
LW ++ C+GL +
Sbjct: 296 LWRTNFDELHCKGLTK 311
Score = 134 (52.2 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 66/303 (21%), Positives = 123/303 (40%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSKKYGVDLVCFTSHP 88
F+ + I+S+D + L TAS D + L++ A + + K V V F+ H
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDV-VTSVQFSPHG 72
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
+ +S+ D ++RL FK H V S+ + + S D+++ +W
Sbjct: 73 NLLASASR---DRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 149 DQRAEK-CQGLLR-VQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGD 205
++ L R A + G L+ + + I+++D K + FS
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN--KQCVNNFS--DS 185
Query: 206 ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265
+ AN V F+ G + + + V D LL Y V N SF P G +
Sbjct: 186 VGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCI---SFHPSGNY 242
Query: 266 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPP-VIKWTPGSLMFVTGSSELS--FWIPDL 322
+I+ S DG++ + G+ + + + T P + ++ G +F +G ++ W +
Sbjct: 243 LITASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNF 301
Query: 323 SKL 325
+L
Sbjct: 302 DEL 304
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 142 (55.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 34/139 (24%), Positives = 66/139 (47%)
Query: 22 QSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDL 81
+S E + + + + +DF K+ + L + S D +I+L+D C+KT++ + V
Sbjct: 136 ESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSC 195
Query: 82 VCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL 141
V FT +I SS+ D+++++ ++ GH D V +++ C S S
Sbjct: 196 VRFTPSGDQLISSSR---DKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSN 252
Query: 142 DRTVLLWDQRAEKCQGLLR 160
D+T+ W+ +C R
Sbjct: 253 DQTIKTWNIVKGECLATYR 271
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 143 (55.4 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 60/278 (21%), Positives = 116/278 (41%)
Query: 48 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107
Y+ ++S D S+R++D TA C + + V C ++YS+ D ++++
Sbjct: 218 YVASSSKDGSVRIWDTTAGRCERILTGHTQSV--TCLRWGGDGLLYSASQ--DRTIKVWR 273
Query: 108 LHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-VQGRPA 166
HD R +GH V +++L S+ +G+ + + QG L+ ++ R
Sbjct: 274 AHDGVLCRTLQGHGHWVNTMAL-STDYALRTGAFEPAEA--SVNPQDLQGSLQELKERAL 330
Query: 167 AAYD---DQGLVFAVAFGGYIRMFDARKYE-KGPFDIFSVGGDISDANVVKFSNDGRLML 222
+ Y+ QG V+ +F E K P + + G + N V FS D R++
Sbjct: 331 SRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP--LTRMTGHQALINQVLFSPDSRIVA 388
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ + I + D G L++ + + ++S + ++SGS D ++ W V++
Sbjct: 389 SASFDKSIKLWDGRTGKYLASLRGHVAA---VYQIAWSADSRLLVSGSSDSTLKVWDVKA 445
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
K E + W+P +G + L W
Sbjct: 446 QKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 67/312 (21%), Positives = 133/312 (42%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
S ++ + S+ F + YL + S D ++R +D++ T T ++ V + ++
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLS---LCSSKDC-FI-SGSLD 142
+ KNG + L K + R GH + LS L ++ +C ++ S S D
Sbjct: 169 RKLASGCKNG---QILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKD 225
Query: 143 RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIF 200
+V +WD A +C+ +L Q + GL+++ + I+++ A G
Sbjct: 226 GSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHD---GVL-CR 281
Query: 201 SVGGDISDANVVKFSNDGRLML--LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 258
++ G N + S D L E ++ D +G+L + +SR + +
Sbjct: 282 TLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQD-LQGSL-QELKERALSRYNLVRGQ 339
Query: 259 FSPEGMFVISGSGDGSVYAWSVRSGKEVASWMS-FDTEPPVIKWTPGSLMFVTGSSELSF 317
PE + +SGS D +++ WS K+ + M+ + ++P S + + S + S
Sbjct: 340 -GPERL--VSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSI 396
Query: 318 WIPDLSKLGAYV 329
+ D + G Y+
Sbjct: 397 KLWD-GRTGKYL 407
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 137 (53.3 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV--CFTSH 87
F +++G + +DFHK V+ DD I++++ CL T+ +D + F H
Sbjct: 37 FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH---LDYIRTTFFHH 93
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
I S+ + D+++R+ + + GH+ V+ S+D +S SLD+TV +
Sbjct: 94 EYPWILSASD--DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRV 151
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDD-QGLVFAVAFG 181
WD GL + P A D +G+ FG
Sbjct: 152 WD-----ISGLRKKNLSPGAVESDVRGITGVDLFG 181
Score = 57 (25.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 257 ASFSPEGMFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
A+F P ++SG+ D V W + K EV + + P + ++ S +
Sbjct: 201 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 260
Query: 315 LSFWIPDLSK 324
S + D+SK
Sbjct: 261 KSIRVWDMSK 270
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAW--SVRSG 283
N+ A F P ++S S D S+ W S R+G
Sbjct: 240 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTG 273
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 137 (53.3 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV--CFTSH 87
F +++G + +DFHK V+ DD I++++ CL T+ +D + F H
Sbjct: 47 FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH---LDYIRTTFFHH 103
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
I S+ + D+++R+ + + GH+ V+ S+D +S SLD+TV +
Sbjct: 104 EYPWILSASD--DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRV 161
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDD-QGLVFAVAFG 181
WD GL + P A D +G+ FG
Sbjct: 162 WD-----ISGLRKKNLSPGAVESDVRGITGVDLFG 191
Score = 57 (25.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 257 ASFSPEGMFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
A+F P ++SG+ D V W + K EV + + P + ++ S +
Sbjct: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270
Query: 315 LSFWIPDLSK 324
S + D+SK
Sbjct: 271 KSIRVWDMSK 280
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAW--SVRSG 283
N+ A F P ++S S D S+ W S R+G
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTG 283
Score = 38 (18.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 260 SPEGMFV-ISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFW 318
+PEG+ + G G W V E+ PP + G V+GS+E F+
Sbjct: 861 APEGLGEDVLGKGQEEGGGWDVEEDLEL---------PPELDVPSG----VSGSAEDGFF 907
Query: 319 IP 320
+P
Sbjct: 908 VP 909
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 137 (53.3 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV--CFTSH 87
F +++G + +DFHK V+ DD I++++ CL T+ +D + F H
Sbjct: 47 FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH---LDYIRTTFFHH 103
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
I S+ + D+++R+ + + GH+ V+ S+D +S SLD+TV +
Sbjct: 104 EYPWILSASD--DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRV 161
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDD-QGLVFAVAFG 181
WD GL + P A D +G+ FG
Sbjct: 162 WD-----ISGLRKKNLSPGAVESDVRGITGVDLFG 191
Score = 57 (25.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 257 ASFSPEGMFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
A+F P ++SG+ D V W + K EV + + P + ++ S +
Sbjct: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270
Query: 315 LSFWIPDLSK 324
S + D+SK
Sbjct: 271 KSIRVWDMSK 280
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAW--SVRSG 283
N+ A F P ++S S D S+ W S R+G
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTG 283
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 137 (53.3 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV--CFTSH 87
F +++G + +DFHK V+ DD I++++ CL T+ +D + F H
Sbjct: 47 FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH---LDYIRTTFFHH 103
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
I S+ + D+++R+ + + GH+ V+ S+D +S SLD+TV +
Sbjct: 104 EYPWILSASD--DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRV 161
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDD-QGLVFAVAFG 181
WD GL + P A D +G+ FG
Sbjct: 162 WD-----ISGLRKKNLSPGAVESDVRGITGVDLFG 191
Score = 57 (25.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 257 ASFSPEGMFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
A+F P ++SG+ D V W + K EV + + P + ++ S +
Sbjct: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270
Query: 315 LSFWIPDLSK 324
S + D+SK
Sbjct: 271 KSIRVWDMSK 280
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAW--SVRSG 283
N+ A F P ++S S D S+ W S R+G
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTG 283
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 137 (53.3 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV--CFTSH 87
F +++G + +DFHK V+ DD I++++ CL T+ +D + F H
Sbjct: 47 FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH---LDYIRTTFFHH 103
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
I S+ + D+++R+ + + GH+ V+ S+D +S SLD+TV +
Sbjct: 104 EYPWILSASD--DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRV 161
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDD-QGLVFAVAFG 181
WD GL + P A D +G+ FG
Sbjct: 162 WD-----ISGLRKKNLSPGAVESDVRGITGVDLFG 191
Score = 57 (25.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 257 ASFSPEGMFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
A+F P ++SG+ D V W + K EV + + P + ++ S +
Sbjct: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270
Query: 315 LSFWIPDLSK 324
S + D+SK
Sbjct: 271 KSIRVWDMSK 280
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAW--SVRSG 283
N+ A F P ++S S D S+ W S R+G
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTG 283
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 119 (46.9 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 40/121 (33%), Positives = 56/121 (46%)
Query: 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP---TTVIYSS------ 95
+S +VTAS D+SI L+ +T + K YGV T H V+ SS
Sbjct: 27 NSDIIVTASRDKSIILWKLTK-------DDKSYGVAQRRLTGHSHFVEDVVLSSDGQFAL 79
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
WD LRL L + R F GH V+S++ + +S S DRT+ LW+ E C
Sbjct: 80 SGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGE-C 138
Query: 156 Q 156
+
Sbjct: 139 K 139
Score = 108 (43.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 32/131 (24%), Positives = 62/131 (47%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L + E F + + S+ F + +V+AS D +I+L++ T C TI+ +
Sbjct: 92 LATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEGDGHKE 150
Query: 81 LV-CFTSHPTTVIYSSKNG-WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFIS 138
V C P T++ + + WD+++++ +L + K GH + ++++ S
Sbjct: 151 WVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCAS 210
Query: 139 GSLDRTVLLWD 149
G D +LLWD
Sbjct: 211 GGKDGVILLWD 221
Score = 61 (26.5 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 260 SPEGMFVISGSGDGSVYAWSVRSGKEVAS 288
SP+G SG DG + W + GK++ S
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGKKLYS 230
Score = 46 (21.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 241 LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSV 280
+ T N K V ++L ++S +G + SG DG V W +
Sbjct: 286 VGTGNQKKVIYCTSL--NWSADGSTLFSGYTDGVVRVWGI 323
>TAIR|locus:2018319 [details] [associations]
symbol:MAC3A "AT1G04510" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0005730
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0042742 eggNOG:COG2319 GO:GO:0006397 GO:GO:0045087
GO:GO:0005681 EMBL:AC000104 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 EMBL:AY039940 EMBL:AY142564 EMBL:AK221436
IPI:IPI00529251 PIR:E86177 RefSeq:NP_563708.1 UniGene:At.21449
HSSP:P32523 ProteinModelPortal:Q94BR4 SMR:Q94BR4 IntAct:Q94BR4
STRING:Q94BR4 PaxDb:Q94BR4 PRIDE:Q94BR4 DNASU:839503
EnsemblPlants:AT1G04510.1 GeneID:839503 KEGG:ath:AT1G04510
GeneFarm:3007 TAIR:At1g04510 HOGENOM:HOG000177308 InParanoid:Q94BR4
OMA:FPDANSV PhylomeDB:Q94BR4 ProtClustDB:CLSN2687671
Genevestigator:Q94BR4 Uniprot:Q94BR4
Length = 523
Score = 143 (55.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 46/208 (22%), Positives = 91/208 (43%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI-NSKKYGVDLVCFTSH 87
+ +D++ + ++ H ++ Y V+AS D + YD+++ CL + ++ + V+ H
Sbjct: 304 TLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFH 363
Query: 88 PTTVIYSSKNGWDESL-RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
P +I + G +S+ ++ + + F GH+ + S+S + + +LD V
Sbjct: 364 PDGLILGT--GTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDG-VR 420
Query: 147 LWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDAR--KYEKGPFDIFSVGG 204
LWD R K + +D G +A IR+F A K E P
Sbjct: 421 LWDLRKLKNFRTFDFPDANSVEFDHSGSYLGIAASD-IRVFQAASVKAEWNPIKTLPDLS 479
Query: 205 DISDANVVKFSNDGRLMLLTTMEGHIHV 232
A VKF D + + + +M+ ++ +
Sbjct: 480 GTGKATSVKFGLDSKYIAVGSMDRNLRI 507
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 142 (55.0 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 36/134 (26%), Positives = 70/134 (52%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F D G + +DF+ S + + +A D++++++DV L+ GV+ C + HP
Sbjct: 181 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN--CISFHP 238
Query: 89 TT--VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
+ ++ +S +G +L++L L + + + +GH V ++S + F SG D VL
Sbjct: 239 SDNYLVTASSDG---TLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 147 LWDQRAEK--CQGL 158
LW ++ C+GL
Sbjct: 296 LWRTNFDELHCKGL 309
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 57/228 (25%), Positives = 89/228 (39%)
Query: 99 WDESLRLLSL--HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW--DQRAEK 154
WD L L + H Y RY GH D V S+ + S S DRTV LW D+R +
Sbjct: 38 WDTFLMLWNFKPHARAY-RYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF 95
Query: 155 CQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKF 214
+ + P + D +A + + F ++S+ KF
Sbjct: 96 SE--FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRF-LYSLYRHTHWVRCAKF 152
Query: 215 SNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS 274
S DGRL++ + + I + D+ ++ ++ N F+P G + S D +
Sbjct: 153 SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV---DFNPSGTCIASAGSDQT 209
Query: 275 VYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
V W VR K + + I + P VT SS+ + I DL
Sbjct: 210 VKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDL 257
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 143 (55.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 33/129 (25%), Positives = 59/129 (45%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L+ ++ + + S+DFH + + S D +++++D+ C+ T GV+
Sbjct: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
++ FT V+ G D +++ L K L FK H ++ SL + +GS
Sbjct: 148 VLRFTPDGRWVV---SGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGS 204
Query: 141 LDRTVLLWD 149
DRTV WD
Sbjct: 205 ADRTVKFWD 213
Score = 136 (52.9 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 44 KSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103
KSS LVT +D + L+ + + ++ G+D V F + V + +G ++
Sbjct: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASG---TI 83
Query: 104 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
+L L + K +R GH +S+ + F SGSLD + +WD R + C
Sbjct: 84 KLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
Score = 127 (49.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 51/213 (23%), Positives = 94/213 (44%)
Query: 114 LRYFKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAA----A 168
L+ F H V L + S ++G D V LW K +L + G +
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLW--AIGKPNAILSLYGHSSGIDSVT 66
Query: 169 YD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME 227
+D + LV A A G I+++D E+ + ++ G S+ V F G +++
Sbjct: 67 FDASEVLVAAGAASGTIKLWDL---EEAKI-VRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 228 GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVA 287
++ + D + + TY K +R + F+P+G +V+SG D V W + +GK +
Sbjct: 123 TNLKIWDIRKKGCIHTY--KGHTRGVNV-LRFTPDGRWVVSGGEDNIVKVWDLTAGKLLT 179
Query: 288 SWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
+ S + + + + P + TGS++ + FW
Sbjct: 180 EFKSHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 46 (21.3 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 18/72 (25%), Positives = 33/72 (45%)
Query: 258 SFSPEGMFVISGSGDG-SVYAWS-VR--SGKEVASWMSFDTEPPVIKWTPGSLMFVT-GS 312
SF+P+G V+ G + +++W +R G +V W + G L+ +
Sbjct: 234 SFNPDGKTVLCGLQESLKIFSWEPIRCHDGVDVG-WSRLSD----MNVHEGKLLGCSYNQ 288
Query: 313 SELSFWIPDLSK 324
S + W+ DLS+
Sbjct: 289 SCVGVWVVDLSR 300
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 141 (54.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F + ++ + F S+ L ++S D+++RL+ + + V VCF++
Sbjct: 56 FTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQ 115
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+++ +S D+S++L S+H K + + H++ V +S S DRTV LWD
Sbjct: 116 SLLTASD---DQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD 172
Query: 150 QRAEKCQGLLRVQGRPA--AAYDD---QGLVFAVAFG-GYIRMFDARKYEKGPFDIFSVG 203
+ + L+ P ++Y D A A +R++D R + + V
Sbjct: 173 ASSRQ---LIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTL--LQHYQVH 227
Query: 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 263
+ N + F G +L + + + +LD G LL T + S + SFS G
Sbjct: 228 S--AAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCV---SFSRSG 282
Query: 264 -MFVISGSGDGSVYAW 278
F +GS D V W
Sbjct: 283 DQFASAGS-DQQVMVW 297
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F + G S +DFH SS+ + TAS D ++R++D+ T L+ V+ + F HP
Sbjct: 181 TFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSF--HP 238
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
+ + + D +L++L L + + L GH +S S D F S D+ V++W
Sbjct: 239 SGNHLLTASS-DSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 133 (51.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 57/261 (21%), Positives = 111/261 (42%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F+ + I+S+DF S + + S D S+ ++++ + K V V F+ P
Sbjct: 13 NFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFS--P 70
Query: 89 TTVIYSSKNGWDESLRLL--SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
+ + +S + D+++RL S+ L F+ H V S+ + ++ S D+++
Sbjct: 71 SAHLLASSSR-DKTVRLWVPSVKGESVL--FRAHTGSVRSVCFSADGQSLLTASDDQSIK 127
Query: 147 LWDQRAEKCQGLLRVQGR--PAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203
LW +K LR A + G L+ +V+ ++++DA + F
Sbjct: 128 LWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQL--IHTFCEP 185
Query: 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 263
G S + V F + + + + V D TLL Y V + N+ SF P G
Sbjct: 186 GGYS--SYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNAL---SFHPSG 240
Query: 264 MFVISGSGDGSVYAWSVRSGK 284
+++ S D ++ + G+
Sbjct: 241 NHLLTASSDSTLKILDLLEGR 261
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 54/220 (24%), Positives = 88/220 (40%)
Query: 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPA 166
+L D R FKGH D + SL S SGS+D +V++W+ + + R G
Sbjct: 4 ALDDPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQS--RAYRFTGHKD 61
Query: 167 AAYDDQGLVFAVAFGGYIRMFDARKYE---KGPFDIFSVGGDISDANVVKFSNDGRLMLL 223
A Q A R R + KG +F V FS DG+ +L
Sbjct: 62 AVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRA--HTGSVRSVCFSADGQSLLT 119
Query: 224 TTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE-ASFSPEGMFVISGSGDGSVYAWSVRS 282
+ + I + R ++ T N+ + A FSP+G ++S S D +V W S
Sbjct: 120 ASDDQSIKLWSVHRQKIICTLR----EHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASS 175
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
+ + ++ + + P S T SS+ + + D+
Sbjct: 176 RQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDI 215
>UNIPROTKB|B4DXK8 [details] [associations]
symbol:UTP15 "cDNA FLJ57656, highly similar to U3 small
nucleolar RNA-associated protein 15 homolog" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 HOGENOM:HOG000185028
HOVERGEN:HBG080690 EMBL:AC010279 UniGene:Hs.406703 HGNC:HGNC:25758
ChiTaRS:UTP15 IPI:IPI00967090 EMBL:AK302021 SMR:B4DXK8
STRING:B4DXK8 Ensembl:ENST00000508491 UCSC:uc011cso.1
Uniprot:B4DXK8
Length = 499
Score = 142 (55.0 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 59/258 (22%), Positives = 116/258 (44%)
Query: 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV 82
S E +F + F + LV S+D ++L+D++ L+ V V
Sbjct: 50 SQEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTV 109
Query: 83 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK---DCFISG 139
FT+ V+ + D +++L + ++K + FK H D V C+SK D FI+G
Sbjct: 110 DFTADKYHVVSGAD---DYTVKLWDIPNSKEILTFKEHSDYV--RCGCASKLNPDLFITG 164
Query: 140 SLDRTVLLWDQRAEKCQGLLRVQ-GRPAAA---YDDQGLVFAVAFGGYIRMFDARKYEKG 195
S D TV ++D R + +L V+ G+P + + GL+ + A G Y++++D K G
Sbjct: 165 SYDHTVKMFDARTS--ESVLSVEHGQPVESVLLFPSGGLLVS-AGGRYVKVWDMLK---G 218
Query: 196 PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255
+ S+ + S+ G+ +L +++ + V + ++ +++ S L
Sbjct: 219 GQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAA----SIL 274
Query: 256 EASFSPEGMFVISGSGDG 273
+ + E ++ G +G
Sbjct: 275 SLALAHEDETIVVGMTNG 292
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 63/247 (25%), Positives = 104/247 (42%)
Query: 47 SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106
+Y VTAS I +Y + +KT + K F ++ S++G ++L
Sbjct: 34 NYAVTASS--RIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDG---GVQLF 88
Query: 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--- 163
+ LR F+GH V ++ + K +SG+ D TV LWD K +
Sbjct: 89 DISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYV 148
Query: 164 RPAAAYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLML 222
R A + L ++ ++MFDAR E + SV +V+ F + G +L
Sbjct: 149 RCGCASKLNPDLFITGSYDHTVKMFDARTSES----VLSVEHGQPVESVLLFPSGG--LL 202
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
++ ++ V D +G L ++K + T S G ++SGS D V +S S
Sbjct: 203 VSAGGRYVKVWDMLKGGQLLV-SLKNHHKTVTC-LCLSSSGQRLLSGSLDRKVKVYSTTS 260
Query: 283 GKEVASW 289
K V S+
Sbjct: 261 YKVVHSF 267
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 132 (51.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 45/166 (27%), Positives = 71/166 (42%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
++SM F +S+ L T D ++R++D+ V LV F PT ++ S
Sbjct: 112 VASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFS- 170
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA---- 152
+ D S+R+ SL D L H+ V SLS +S D+ ++WD ++
Sbjct: 171 SAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQSYQTT 230
Query: 153 ------EKCQG--LLRVQGRPAAAYDDQGLVFAVAFG-GYIRMFDA 189
E + LL Q PA GL F A G +R+++A
Sbjct: 231 RTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQGILRVWEA 276
Score = 128 (50.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F + + ++ F + L TAS D +I+L+ + +CLKT V V F S +
Sbjct: 517 FTGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGS 576
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
++ S +G L+L ++ N+ +R H D+V L D I+G D ++LW
Sbjct: 577 QLLSSGSDGL---LKLWTIKSNECVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWK 633
Query: 150 QRAE 153
E
Sbjct: 634 DVTE 637
Score = 57 (25.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 212 VKFSNDGRLMLLTTMEGHIHV--LDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269
V+FS +++ + +G I + L F + L T+ S L+ +F G ++S
Sbjct: 527 VQFSPTDQVLATASADGTIKLWALQDF--SCLKTFEGHDAS---VLKVAFVSRGSQLLSS 581
Query: 270 SGDGSVYAWSVRSGK 284
DG + W+++S +
Sbjct: 582 GSDGLLKLWTIKSNE 596
Score = 55 (24.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/70 (21%), Positives = 29/70 (41%)
Query: 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP-GSLMFV 309
R FSP + + S DG++ W+++ + ++ D + + GS +
Sbjct: 521 RRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLS 580
Query: 310 TGSSEL-SFW 318
+GS L W
Sbjct: 581 SGSDGLLKLW 590
Score = 52 (23.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 22/123 (17%), Positives = 48/123 (39%)
Query: 213 KFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD 272
K + G++ + GH H + + + L + S++ T++ PE + S + D
Sbjct: 404 KMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAAD 463
Query: 273 GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELS--FW-IPDLSKLGAYV 329
++ + D + + +P + TGS + + W +P LG +
Sbjct: 464 SGPVLLQAQTTRRC-----HDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFT 518
Query: 330 GRK 332
G +
Sbjct: 519 GHR 521
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 140 (54.3 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 51/262 (19%), Positives = 119/262 (45%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH- 87
+ + ++G + + ++ S L +AS D+++ ++D +K + V+ C+ +
Sbjct: 131 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARR 189
Query: 88 -PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
P V S +G +++L + ++ F+ + +V++++ + D ISG +D +
Sbjct: 190 GPQLVCTGSDDG---TVKLWDIRKKAAVQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIK 245
Query: 147 LWDQRAEKCQGLLR--VQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203
+WD R K +R + +G + + A +R++D R + +
Sbjct: 246 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQ 305
Query: 204 GDIS--DANVVK--FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259
G++ + N+++ +S DG + + + ++V D+ +L Y + P S E +F
Sbjct: 306 GNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRIL--YKL-PGHAGSVNELAF 362
Query: 260 SPEGMFVISGSGDGSVYAWSVR 281
PE ++S S D +Y ++
Sbjct: 363 HPEEPIILSASSDKRLYMGEIQ 384
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 58/265 (21%), Positives = 106/265 (40%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY-GVDLVCFTS 86
M + G + FH + L +A D I L++V C K + G + +
Sbjct: 87 MLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYN 145
Query: 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTV 145
++++S+ D+++ + + ++ KGH V S + +GS D TV
Sbjct: 146 TDGSMLFSAST--DKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 203
Query: 146 LLWDQRAEKC-QGLLRVQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203
LWD R + Q A ++D + + I+++D R+ + +++
Sbjct: 204 KLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL----TYTMR 259
Query: 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLD--SF----RGTLLSTYNVKPVSRNSTLEA 257
G + S++G +L M+ + + D F R + NV +N L
Sbjct: 260 GHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKN-LLRC 318
Query: 258 SFSPEGMFVISGSGDGSVYAWSVRS 282
S+SP+G + GS D VY W S
Sbjct: 319 SWSPDGSKIAGGSADRFVYVWDTTS 343
>UNIPROTKB|Q8TED0 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
HOGENOM:HOG000185028 HOVERGEN:HBG080690 KO:K14549 EMBL:AK022849
EMBL:AK074217 EMBL:AC010279 EMBL:BC013064 EMBL:CR457295
IPI:IPI00152708 RefSeq:NP_115551.2 UniGene:Hs.406703
ProteinModelPortal:Q8TED0 SMR:Q8TED0 STRING:Q8TED0
PhosphoSite:Q8TED0 DMDM:296452998 SWISS-2DPAGE:Q8TED0 PaxDb:Q8TED0
PRIDE:Q8TED0 DNASU:84135 Ensembl:ENST00000296792 GeneID:84135
KEGG:hsa:84135 UCSC:uc003kcw.1 GeneCards:GC05P072898
HGNC:HGNC:25758 neXtProt:NX_Q8TED0 PharmGKB:PA142670631
InParanoid:Q8TED0 ChiTaRS:UTP15 GenomeRNAi:84135 NextBio:73441
ArrayExpress:Q8TED0 Bgee:Q8TED0 CleanEx:HS_UTP15
Genevestigator:Q8TED0 GermOnline:ENSG00000164338 Uniprot:Q8TED0
Length = 518
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 59/258 (22%), Positives = 116/258 (44%)
Query: 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV 82
S E +F + F + LV S+D ++L+D++ L+ V V
Sbjct: 69 SQEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTV 128
Query: 83 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK---DCFISG 139
FT+ V+ + D +++L + ++K + FK H D V C+SK D FI+G
Sbjct: 129 DFTADKYHVVSGAD---DYTVKLWDIPNSKEILTFKEHSDYV--RCGCASKLNPDLFITG 183
Query: 140 SLDRTVLLWDQRAEKCQGLLRVQ-GRPAAA---YDDQGLVFAVAFGGYIRMFDARKYEKG 195
S D TV ++D R + +L V+ G+P + + GL+ + A G Y++++D K G
Sbjct: 184 SYDHTVKMFDARTS--ESVLSVEHGQPVESVLLFPSGGLLVS-AGGRYVKVWDMLK---G 237
Query: 196 PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255
+ S+ + S+ G+ +L +++ + V + ++ +++ S L
Sbjct: 238 GQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAA----SIL 293
Query: 256 EASFSPEGMFVISGSGDG 273
+ + E ++ G +G
Sbjct: 294 SLALAHEDETIVVGMTNG 311
Score = 130 (50.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 67/261 (25%), Positives = 110/261 (42%)
Query: 35 GRISSMDFHKSS--SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
G +S +DF +Y VTAS I +Y + +KT + K F ++
Sbjct: 39 GAVSKVDFSPQPPYNYAVTASS--RIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLV 96
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
S++G ++L + LR F+GH V ++ + K +SG+ D TV LWD
Sbjct: 97 AGSEDG---GVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPN 153
Query: 153 EKCQGLLRVQG---RPAAAYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD 208
K + R A + L ++ ++MFDAR E + SV
Sbjct: 154 SKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDARTSES----VLSVEHGQPV 209
Query: 209 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268
+V+ F + G +L++ ++ V D +G L ++K + T S G ++S
Sbjct: 210 ESVLLFPSGG--LLVSAGGRYVKVWDMLKGGQLLV-SLKNHHKTVTC-LCLSSSGQRLLS 265
Query: 269 GSGDGSVYAWSVRSGKEVASW 289
GS D V +S S K V S+
Sbjct: 266 GSLDRKVKVYSTTSYKVVHSF 286
>UNIPROTKB|F1S2K2 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GeneTree:ENSGT00390000004228
OMA:QFEGHTK EMBL:CU694283 Ensembl:ENSSSCT00000015368 Uniprot:F1S2K2
Length = 518
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 57/258 (22%), Positives = 116/258 (44%)
Query: 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV 82
S E +F + F + L+ S+D ++L+D++ L+ V V
Sbjct: 69 SQEPIKTFSRFKDTAYCATFRQDGRLLIAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTV 128
Query: 83 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK---DCFISG 139
FT+ V+ + D +++L + ++K + FK H D V C+SK D F++G
Sbjct: 129 DFTADKYHVVSGAD---DYTVKLWDIPNSKEILTFKEHSDYV--RCGCASKLNPDLFVTG 183
Query: 140 SLDRTVLLWDQRAEKCQGLLRVQ-GRPAAA---YDDQGLVFAVAFGGYIRMFDARKYEKG 195
S D TV ++D R Q ++ V+ G+P + + GL+ + A G Y++++D K G
Sbjct: 184 SYDHTVKMFDARTN--QSVISVEHGQPVESVLLFPSGGLLVS-AGGRYVKVWDVLK---G 237
Query: 196 PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255
+ S+ + S+ G+ +L +++ + V + ++ +++ S L
Sbjct: 238 GQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAA----SIL 293
Query: 256 EASFSPEGMFVISGSGDG 273
+ + E ++ G +G
Sbjct: 294 SLALAHEDETIVVGMTNG 311
Score = 126 (49.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 67/261 (25%), Positives = 110/261 (42%)
Query: 35 GRISSMDFHKSS--SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
G +S +DF +Y VTAS I +Y + +KT + K F +I
Sbjct: 39 GAVSKVDFSPQPPYNYAVTASS--RIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLI 96
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
S++G ++L + LR F+GH V ++ + K +SG+ D TV LWD
Sbjct: 97 AGSEDG---GVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPN 153
Query: 153 EKCQGLLRVQG---RPAAAYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD 208
K + R A + L ++ ++MFDAR + + SV
Sbjct: 154 SKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNQS----VISVEHGQPV 209
Query: 209 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268
+V+ F + G +L++ ++ V D +G L ++K + T S G ++S
Sbjct: 210 ESVLLFPSGG--LLVSAGGRYVKVWDVLKGGQLLV-SLKNHHKTVTC-LCLSSSGQRLLS 265
Query: 269 GSGDGSVYAWSVRSGKEVASW 289
GS D V +S S K V S+
Sbjct: 266 GSLDRKVKVYSTTSYKVVHSF 286
>RGD|1310992 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310992 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
EMBL:BC131851 IPI:IPI00360292 RefSeq:NP_001101117.1 UniGene:Rn.7959
ProteinModelPortal:A2RRU3 STRING:A2RRU3 PRIDE:A2RRU3
Ensembl:ENSRNOT00000022259 GeneID:310019 KEGG:rno:310019
UCSC:RGD:1310992 InParanoid:A2RRU3 NextBio:661554
ArrayExpress:A2RRU3 Genevestigator:A2RRU3 Uniprot:A2RRU3
Length = 528
Score = 142 (55.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 59/258 (22%), Positives = 116/258 (44%)
Query: 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV 82
S E +F + F + LV S+D ++L+D++ L+ V V
Sbjct: 69 SQEPVKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTV 128
Query: 83 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK---DCFISG 139
FT+ V+ + D +++L + ++K + FK H D V C+SK D F++G
Sbjct: 129 DFTADKYHVVSGAD---DYTVKLWDIPNSKEILTFKEHSDYV--RCGCASKLNPDLFVTG 183
Query: 140 SLDRTVLLWDQRAEKCQGLLRVQ-GRPAAA---YDDQGLVFAVAFGGYIRMFDARKYEKG 195
S D TV ++D R K +L V+ G+P + + GL+ + A G Y++++D K G
Sbjct: 184 SYDHTVKMFDARTNK--NVLCVEHGQPVESVLLFPSGGLLVS-AGGRYVKVWDMLK---G 237
Query: 196 PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255
+ S+ + S+ G+ +L +++ + + + ++ +++ S L
Sbjct: 238 GQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKIYSTTSYKVVHSFDYAA----SIL 293
Query: 256 EASFSPEGMFVISGSGDG 273
+ S + V+ G +G
Sbjct: 294 SLALSHQDETVVVGMTNG 311
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 65/261 (24%), Positives = 110/261 (42%)
Query: 35 GRISSMDFHKSS--SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
G +S +DF +Y VTAS I +Y + +KT + K F ++
Sbjct: 39 GAVSKVDFSPQPPYNYAVTASS--RIHIYGRYSQEPVKTFSRFKDTAYCATFRQDGQLLV 96
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
S++G ++L + LR F+GH V ++ + K +SG+ D TV LWD
Sbjct: 97 AGSEDG---VVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPN 153
Query: 153 EKCQGLLRVQG---RPAAAYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD 208
K + R A + L ++ ++MFDAR + ++ V
Sbjct: 154 SKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNK----NVLCVEHGQPV 209
Query: 209 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268
+V+ F + G +L++ ++ V D +G L ++K + T S G ++S
Sbjct: 210 ESVLLFPSGG--LLVSAGGRYVKVWDMLKGGQLLV-SLKNHHKTVTC-LCLSSSGQRLLS 265
Query: 269 GSGDGSVYAWSVRSGKEVASW 289
GS D V +S S K V S+
Sbjct: 266 GSLDRKVKIYSTTSYKVVHSF 286
>UNIPROTKB|Q5ZL33 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9031 "Gallus gallus" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0005102 GO:GO:0005681 GO:GO:0000122 GO:GO:0030512 HSSP:P63005
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M EMBL:AJ719901
IPI:IPI00577361 RefSeq:NP_001006247.2 UniGene:Gga.44357
ProteinModelPortal:Q5ZL33 STRING:Q5ZL33 PRIDE:Q5ZL33
Ensembl:ENSGALT00000021374 GeneID:418175 KEGG:gga:418175
InParanoid:Q5ZL33 NextBio:20821378 Uniprot:Q5ZL33
Length = 350
Score = 139 (54.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 60/264 (22%), Positives = 106/264 (40%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F + G + +K ++ TA+ D + +++D + L T+ + K+ V V FT
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELITL-AHKHIVKSVDFTQDS 112
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
Y G D+ LR+ L + H + +L SS D I + D+TV LW
Sbjct: 113 N---YLLTGGQDKLLRIYDLSKPEAEPDVVSGHTSGIKKALWSSDDKQILSADDKTVRLW 169
Query: 149 DQRA-EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS 207
D+ + + L + Y +G + + +G I A E+ F I+
Sbjct: 170 DRSTMTEVKALNVAMSVSSMEYVPEGQILVITYGKTIAFHSAETLEQ--IKSFEAPATIN 227
Query: 208 DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGMF 265
A++ + ++ + ++ D G L +Y + P+ FSP+G
Sbjct: 228 SASL---HPEKECLVAGGEDFKLYKYDYNTGEELESYKGHFGPIHC-----VRFSPDGEL 279
Query: 266 VISGSGDGSVYAWSVRSGKEVASW 289
SGS DG++ W GK W
Sbjct: 280 YASGSEDGTLRLWQTTVGKTYGLW 303
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 142 (55.0 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 55/234 (23%), Positives = 99/234 (42%)
Query: 10 DKVSLELSEEILQ---SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA 66
DK S ++ E I+ + E+ + + ++G + F +YL+++S+D ++RL+ +
Sbjct: 277 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 335
Query: 67 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS 126
TCL Y V F+ + Y G D RL + + LR F GH V
Sbjct: 336 TCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC 392
Query: 127 LSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAV-AFGGY 183
+ + +GS DRTV LWD C + P + + G A A G
Sbjct: 393 TRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 452
Query: 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237
+ ++D G + + G ++FS DG ++ +M+ + + D+ +
Sbjct: 453 VLLWDIGH---GLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 502
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 46/190 (24%), Positives = 80/190 (42%)
Query: 100 DESL-RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 158
D+ L R++ L+ GH V S ++ +S S D TV LW + C L
Sbjct: 281 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC--L 338
Query: 159 LRVQGRPAAAYDDQGLVFAVAF--GGY---IRMFDARKYEKGPFDIFSVGGDISDANVVK 213
+ +G +D Q + F GG+ R++ Y+ P IF+ G ++D N +
Sbjct: 339 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ--PLRIFA--GHLADVNCTR 394
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
F + + + + + + D G + + +S +FSP G F+ +G+ DG
Sbjct: 395 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL---TFSPNGRFLATGATDG 451
Query: 274 SVYAWSVRSG 283
V W + G
Sbjct: 452 RVLLWDIGHG 461
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 123 (48.4 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 35/119 (29%), Positives = 57/119 (47%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVC-FTSHPTTVIYSS 95
+ S+D + L TAS+ S++++++ C++T G L C F VI +
Sbjct: 394 VRSIDISDDNKLLATASNG-SLKIWNIKTHKCIRTFEC---GYALTCKFLPGGLLVILGT 449
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVV-SLSLCSSKDCFISGSLDRTVLLWDQRAE 153
+NG L+L L + L + HD + SL L S ++GS D+TV WD + E
Sbjct: 450 RNG---ELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKVE 505
Score = 117 (46.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 31/116 (26%), Positives = 51/116 (43%)
Query: 40 MDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW 99
++ HK + L D I+++D+ + T L N K + L+ F T +I SK
Sbjct: 85 LEAHKDTDLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSK--- 141
Query: 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
D ++ + L L + H D + C +D IS S D + LWD + +C
Sbjct: 142 DSNIIVWDLVGEVGLYKLRSHKDSITGF-WCQGEDWLISTSKDGMIKLWDLKTHQC 196
Score = 69 (29.3 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 25/112 (22%), Positives = 51/112 (45%)
Query: 170 DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGH 229
DD L+ A A G +++++ + ++ F G ++ KF G L++L T G
Sbjct: 401 DDNKLL-ATASNGSLKIWNIKTHKC--IRTFECGYALT----CKFLPGGLLVILGTRNGE 453
Query: 230 IHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 281
+ + D +LL T ++ + + +G +++GS D +V W +
Sbjct: 454 LQLFDLASSSLLDT--IEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFK 503
Score = 68 (29.0 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 29/116 (25%), Positives = 53/116 (45%)
Query: 208 DANVVKFSNDGRLMLLTTMEGHIHV--LDSFRGTLLSTYNVK-PVSRNSTLEASFSPEGM 264
D V+ S D R + ++ ++ + V LDS + LS Y K PV +++ SF +
Sbjct: 533 DILCVRVSPDDRYLAISLLDNTVKVFFLDSMK-FYLSLYGHKLPVL---SIDISF--DSK 586
Query: 265 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
+I+ S D ++ W + G S + +K+ P S F + S + + +W
Sbjct: 587 MIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYW 642
Score = 61 (26.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 26/118 (22%), Positives = 48/118 (40%)
Query: 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 263
G +D + S+D +L L T G + + + + T+ L F P G
Sbjct: 389 GQRTDVRSIDISDDNKL-LATASNGSLKIWNIKTHKCIRTFEC-----GYALTCKFLPGG 442
Query: 264 MFVISGSGDGSVYAWSVRSGKEVASWM-SFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
+ VI G+ +G + + + S + + + D + T VTGS++ + FW
Sbjct: 443 LLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFW 500
Score = 46 (21.3 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 14/84 (16%), Positives = 42/84 (50%)
Query: 241 LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVI- 299
L T+ ++ + + + + + +++ + +GS+ W++++ K + + F+ +
Sbjct: 380 LKTHTIELQGQRTDVRSIDISDDNKLLATASNGSLKIWNIKTHKCIRT---FECGYALTC 436
Query: 300 KWTPGSLMFVTGSSELSFWIPDLS 323
K+ PG L+ + G+ + DL+
Sbjct: 437 KFLPGGLLVILGTRNGELQLFDLA 460
Score = 43 (20.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 262 EGMFVISGSGDGSVYAW 278
+G FV+S S D S+ W
Sbjct: 668 DGGFVVSSSHDHSIRIW 684
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 50/262 (19%), Positives = 119/262 (45%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH- 87
+ + ++G + + ++ S L +AS D+++ ++D +K + V+ C+ +
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARR 163
Query: 88 -PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
P V S +G +++L + ++ F+ + +V++++ + D ISG +D +
Sbjct: 164 GPQLVCTGSDDG---TVKLWDIRKKAAVQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIK 219
Query: 147 LWDQRAEKCQGLLR--VQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203
+WD R K +R + +G + + A +R++D R + +
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ 279
Query: 204 GDIS--DANVVK--FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259
G++ + N+++ +S DG + + + ++V D+ +L Y + P S E +F
Sbjct: 280 GNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVL--YKL-PGHAGSINEVAF 336
Query: 260 SPEGMFVISGSGDGSVYAWSVR 281
P+ ++S S D +Y ++
Sbjct: 337 HPDEPIILSASSDKRLYMGEIQ 358
Score = 124 (48.7 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 60/257 (23%), Positives = 113/257 (43%)
Query: 80 DLVCFTSHPTTVIYSSKNGWDESLRLLSLH-DNKYLRYFKGHHDRVVSLSLCSSKDCFIS 138
++ C HP +S G+D + L +++ D KGH V+ L + S
Sbjct: 69 EVYCCKFHPNGSTLASA-GFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFS 127
Query: 139 GSLDRTVLLWDQRAEKCQGLLRVQGRPA---AAYDDQ-G--LVFAVAFGGYIRMFDARKY 192
S D+TV +WD +E + + R++G + + Y + G LV + G ++++D RK
Sbjct: 128 ASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK- 184
Query: 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252
K F + V F++ ++ ++ I V D + L TY ++ + +
Sbjct: 185 -KAAVQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA-D 237
Query: 253 STLEASFSPEGMFVISGSGDGSVYAWSVR--SGKE----VASWMSFDTEPPVIK--WTPG 304
S S S EG +++S + D +V W VR + KE + + E +++ W+P
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 305 SLMFVTGSSELSFWIPD 321
GS++ ++ D
Sbjct: 298 GSKIAAGSADRFVYVWD 314
>UNIPROTKB|I3LNC4 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030512 "negative regulation of transforming growth
factor beta receptor signaling pathway" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 OMA:LWQTTVG EMBL:FP325218
Ensembl:ENSSSCT00000023218 Uniprot:I3LNC4
Length = 363
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 59/265 (22%), Positives = 105/265 (39%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F + G + +K ++ TA+ D + +++D + L T+ + K+ V V FT
Sbjct: 67 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDS 125
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
Y G D+ LR+ L+ + + GH + CS +S D+TV L
Sbjct: 126 N---YLLTGGQDKLLRIYDLNKPEAEPKEISGHSSGIKKALWCSEDKQILSAD-DKTVRL 181
Query: 148 WDQRA-EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
WD + + L + Y +G + + +G I A + P F I
Sbjct: 182 WDHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAISLD--PIKSFEAPATI 239
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGM 264
+ A++ + ++ + ++ D G L +Y + P+ FSP+G
Sbjct: 240 NSASL---HPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHC-----VRFSPDGE 291
Query: 265 FVISGSGDGSVYAWSVRSGKEVASW 289
SGS DG++ W GK W
Sbjct: 292 LYASGSEDGTLRLWQTVVGKTYGLW 316
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 57/273 (20%), Positives = 112/273 (41%)
Query: 49 LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108
L ++S D +IR++D + C ++ + + + C +IYS D ++R+ +
Sbjct: 245 LASSSKDSTIRIWDTES--CKNLMSLSGHTMSVTCLKWGGEGLIYSGSQ--DRTVRVFNT 300
Query: 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLLWDQRAEKCQGLLRVQGRPAA 167
D + +R GH V +L+L + D + +GS D T +D E + L A
Sbjct: 301 TDGRLVRVLDGHAHWVNTLAL--NTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVKA 358
Query: 168 AYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME 227
++ + + + M++ + I + G N+V FS DGR + +
Sbjct: 359 KSKGMEILISGSDDFTVIMWNPSVTKTS---ISRLTGHQQLINLVSFSPDGRYFASASFD 415
Query: 228 GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVA 287
I + D G L + + + +S + +++SGS D ++ W +++ K
Sbjct: 416 KSIKLWDGQSGKFLGNFRGHV---GAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEK 472
Query: 288 SWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
E + W+P +GS + L W
Sbjct: 473 ELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 116 (45.9 bits), Expect = 0.00069, P = 0.00069
Identities = 29/114 (25%), Positives = 59/114 (51%)
Query: 44 KSSSYLVTASDDESIRLYDVTAA-TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 102
K L++ SDD ++ +++ + T + + + ++LV F+ P ++S + +D+S
Sbjct: 361 KGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFS--PDGRYFASAS-FDKS 417
Query: 103 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
++L K+L F+GH V + S +SGS D T+ +WD + +K +
Sbjct: 418 IKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKME 471
Score = 115 (45.5 bits), Expect = 0.00089, P = 0.00089
Identities = 31/112 (27%), Positives = 51/112 (45%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
I+ + F Y +AS D+SI+L+D + L V VC++S ++ SK
Sbjct: 397 INLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSK 456
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
D +L++ + K + GH D V ++ D SGS DR + +W
Sbjct: 457 ---DSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/159 (30%), Positives = 81/159 (50%)
Query: 4 SQSEREDK---VSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRL 60
+ +E ED VS+E ++ IL S+E G S D R S FH Y+ T+S+D+S RL
Sbjct: 362 NDNEEEDNDATVSIE-TQPIL-SLE-GHS--DVVNRCS---FHPCGRYITTSSNDKSWRL 413
Query: 61 YDV-TAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG 119
+D+ + CL GV + S + + S++G +R+ L + + YF+G
Sbjct: 414 WDLESGGKCLLDQEGHSDGVMGISIQSDGSLLATGSQDGL---VRIWDLRSGRPILYFQG 470
Query: 120 HHDRVVSLSLCSSKDCFISGSLDRTVLLWD--QRAEKCQ 156
H +V+S+ + S S D TV++WD ++ + CQ
Sbjct: 471 HSKQVISVDWSPNGYQLASSSEDNTVVIWDIRKKEQSCQ 509
>UNIPROTKB|A7MB12 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006364 EMBL:BC151279 IPI:IPI00703711 RefSeq:NP_001094598.1
UniGene:Bt.13342 ProteinModelPortal:A7MB12 STRING:A7MB12
Ensembl:ENSBTAT00000036838 GeneID:526343 KEGG:bta:526343 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 InParanoid:A7MB12 KO:K14549 OMA:QFEGHTK
OrthoDB:EOG4Q58P5 NextBio:20874350 Uniprot:A7MB12
Length = 519
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 58/258 (22%), Positives = 116/258 (44%)
Query: 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV 82
S E +F + F + LV S+D ++L+D++ L+ V V
Sbjct: 69 SQEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHSV 128
Query: 83 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK---DCFISG 139
FT+ V+ + D +++L + ++K + FK H D V C+SK D F++G
Sbjct: 129 DFTADKYHVVSGAD---DYTVKLWDIPNSKEILTFKEHSDYV--RCGCASKLNTDLFVTG 183
Query: 140 SLDRTVLLWDQRAEKCQGLLRVQ-GRPAAA---YDDQGLVFAVAFGGYIRMFDARKYEKG 195
S D TV ++D R Q ++ V+ G+P + + GL+ + A G Y++++D K G
Sbjct: 184 SYDHTVKMFDARTN--QSVISVEHGQPVESVLLFPSGGLLVS-AGGRYVKVWDMLK---G 237
Query: 196 PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255
+ S+ + S+ G+ +L +++ + V + ++ +++ S L
Sbjct: 238 GQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYTA----SIL 293
Query: 256 EASFSPEGMFVISGSGDG 273
+ + E ++ G +G
Sbjct: 294 SLALAHEDETIVVGMTNG 311
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 67/261 (25%), Positives = 110/261 (42%)
Query: 35 GRISSMDFHKSS--SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
G +S +DF +Y VTAS I +Y + +KT + K F ++
Sbjct: 39 GAVSKVDFSPQPPYNYAVTASS--RIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLV 96
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
S++G ++L + LR F+GH V S+ + K +SG+ D TV LWD
Sbjct: 97 AGSEDG---GVQLFDISGRAPLRQFEGHTKAVHSVDFTADKYHVVSGADDYTVKLWDIPN 153
Query: 153 EKCQGLLRVQG---RPAAAYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD 208
K + R A + L ++ ++MFDAR + + SV
Sbjct: 154 SKEILTFKEHSDYVRCGCASKLNTDLFVTGSYDHTVKMFDARTNQS----VISVEHGQPV 209
Query: 209 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268
+V+ F + G +L++ ++ V D +G L ++K + T S G ++S
Sbjct: 210 ESVLLFPSGG--LLVSAGGRYVKVWDMLKGGQLLV-SLKNHHKTVTC-LCLSSSGQRLLS 265
Query: 269 GSGDGSVYAWSVRSGKEVASW 289
GS D V +S S K V S+
Sbjct: 266 GSLDRKVKVYSTTSYKVVHSF 286
>UNIPROTKB|E2RBU1 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000122 GO:GO:0030512 GeneTree:ENSGT00630000089849 CTD:11171
KO:K13137 OMA:LWQTTVG EMBL:AAEX03015237 RefSeq:XP_543790.1
ProteinModelPortal:E2RBU1 Ensembl:ENSCAFT00000020131 GeneID:486663
KEGG:cfa:486663 Uniprot:E2RBU1
Length = 350
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/265 (22%), Positives = 105/265 (39%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F + G + +K ++ TA+ D + +++D + L T+ + K+ V V FT
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDS 112
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
Y G D+ LR+ L+ + + GH + CS +S D+TV L
Sbjct: 113 N---YLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRL 168
Query: 148 WDQRA-EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
WD + + L + Y +G + + +G I A + P F I
Sbjct: 169 WDHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLD--PIKSFEAPATI 226
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGM 264
+ A++ + ++ + ++ D G L +Y + P+ FSP+G
Sbjct: 227 NSASL---HPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHC-----VRFSPDGE 278
Query: 265 FVISGSGDGSVYAWSVRSGKEVASW 289
SGS DG++ W GK W
Sbjct: 279 LYASGSEDGTLRLWQTVVGKTYGLW 303
>UNIPROTKB|Q9Y3F4 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0005634 Reactome:REACT_111102
Pathway_Interaction_DB:tgfbrpathway GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0007179 EMBL:CH471094 GO:GO:0030512 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:AJ010025 EMBL:AB024327 EMBL:AF161496 EMBL:AY049776
EMBL:AL136691 EMBL:BT020044 EMBL:BT020045 EMBL:AK312295
EMBL:BC000162 EMBL:BC062306 IPI:IPI00941907 RefSeq:NP_009109.3
UniGene:Hs.504895 ProteinModelPortal:Q9Y3F4 SMR:Q9Y3F4
IntAct:Q9Y3F4 MINT:MINT-1346033 STRING:Q9Y3F4 PhosphoSite:Q9Y3F4
DMDM:12643951 OGP:Q9Y3F4 PaxDb:Q9Y3F4 PeptideAtlas:Q9Y3F4
PRIDE:Q9Y3F4 DNASU:11171 Ensembl:ENST00000419869 GeneID:11171
KEGG:hsa:11171 UCSC:uc001rdc.4 GeneCards:GC12P016035
HGNC:HGNC:30796 HPA:HPA027320 MIM:605986 neXtProt:NX_Q9Y3F4
PharmGKB:PA134867032 InParanoid:Q9Y3F4 PhylomeDB:Q9Y3F4
ChiTaRS:STRAP GenomeRNAi:11171 NextBio:42509 ArrayExpress:Q9Y3F4
Bgee:Q9Y3F4 CleanEx:HS_STRAP Genevestigator:Q9Y3F4
GermOnline:ENSG00000023734 Uniprot:Q9Y3F4
Length = 350
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/265 (22%), Positives = 105/265 (39%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F + G + +K ++ TA+ D + +++D + L T+ + K+ V V FT
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDS 112
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
Y G D+ LR+ L+ + + GH + CS +S D+TV L
Sbjct: 113 N---YLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRL 168
Query: 148 WDQRA-EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
WD + + L + Y +G + + +G I A + P F I
Sbjct: 169 WDHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLD--PIKSFEAPATI 226
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGM 264
+ A++ + ++ + ++ D G L +Y + P+ FSP+G
Sbjct: 227 NSASL---HPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHC-----VRFSPDGE 278
Query: 265 FVISGSGDGSVYAWSVRSGKEVASW 289
SGS DG++ W GK W
Sbjct: 279 LYASGSEDGTLRLWQTVVGKTYGLW 303
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/170 (24%), Positives = 81/170 (47%)
Query: 6 SEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA 65
S +DK +++L ++ S E S+ ++ G ++ +DFH S + + A D +++++DV
Sbjct: 162 SASDDK-TVKLWDKT--SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
Query: 66 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 125
L+ V+ + F HP+ + + D +L++L L + + L GH
Sbjct: 219 HRLLQHYQLHSAAVNALSF--HPSGNYLVTASS-DSTLKILDLMEGRLLYTLHGHQGPAT 275
Query: 126 SLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ-G-LLRVQGRPAAAYDDQG 173
+++ + + F SG D V++W + G +LRVQ PA G
Sbjct: 276 TVAFSRTGEYFASGGSDEQVMVWKSNFDIVDYGEVLRVQRPPATRASSSG 325
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 53/253 (20%), Positives = 98/253 (38%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F + ++ ++F S L + S D+++R++ + V V F S
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+ + +S D+++++ S H K+L H + V +S S D+TV LWD
Sbjct: 117 SFVTASD---DKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 150 QRAEKCQGLLRVQGRPAAAYD--DQGLVFAVA-FGGYIRMFDARKYEK-GPFDIFSVGGD 205
+ + +C G D G A A ++++D R + + + S
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA-- 231
Query: 206 ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265
N + F G ++ + + + +LD G LL T + + +FS G +
Sbjct: 232 ---VNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGH---QGPATTVAFSRTGEY 285
Query: 266 VISGSGDGSVYAW 278
SG D V W
Sbjct: 286 FASGGSDEQVMVW 298
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 57/288 (19%), Positives = 118/288 (40%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F+ + ++S+DF ++ L + S D + ++ + T K V V F+ P+
Sbjct: 15 FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFS--PS 72
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
+ +S + D+++R+ + F+ H V S+ CS F++ S D+TV +W
Sbjct: 73 GHLLASGSR-DKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWS 131
Query: 150 QRAEKCQGLL--RVQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
+K L + A + G L+ + + ++++D E GG +
Sbjct: 132 THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC-VHSYCEHGGFV 190
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 266
+ V F G + M+ + V D LL Y + + N+ SF P G ++
Sbjct: 191 T---YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL---SFHPSGNYL 244
Query: 267 ISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
++ S D ++ + G+ + + + ++ F +G S+
Sbjct: 245 VTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 46/209 (22%), Positives = 82/209 (39%)
Query: 117 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAA--YDDQGL 174
F GH D V ++ S SGS D+TV +W + + R + + G
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 175 VFAVAFGGY-IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVL 233
F A ++++ + + F +FS+ I+ KFS DGRL++ + + + +
Sbjct: 117 SFVTASDDKTVKVWSTHRQK---F-LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 234 DSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFD 293
D + +Y F P G + + D +V W VR+ + + +
Sbjct: 173 DKTSRECVHSYCEHG---GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 294 TEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
+ + P VT SS+ + I DL
Sbjct: 230 AAVNALSFHPSGNYLVTASSDSTLKILDL 258
>UNIPROTKB|B4DNJ6 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0016301 "kinase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0030054 "cell
junction" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005739 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0016301 HOGENOM:HOG000174258
HOVERGEN:HBG055228 OMA:LWQTTVG UniGene:Hs.504895 HGNC:HGNC:30796
ChiTaRS:STRAP EMBL:AC022073 EMBL:AK297942 IPI:IPI00294536
SMR:B4DNJ6 IntAct:B4DNJ6 STRING:B4DNJ6 Ensembl:ENST00000025399
UCSC:uc010shw.2 Uniprot:B4DNJ6
Length = 363
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 59/265 (22%), Positives = 105/265 (39%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F + G + +K ++ TA+ D + +++D + L T+ + K+ V V FT
Sbjct: 67 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDS 125
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
Y G D+ LR+ L+ + + GH + CS +S D+TV L
Sbjct: 126 N---YLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRL 181
Query: 148 WDQRA-EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
WD + + L + Y +G + + +G I A + P F I
Sbjct: 182 WDHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLD--PIKSFEAPATI 239
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGM 264
+ A++ + ++ + ++ D G L +Y + P+ FSP+G
Sbjct: 240 NSASL---HPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHC-----VRFSPDGE 291
Query: 265 FVISGSGDGSVYAWSVRSGKEVASW 289
SGS DG++ W GK W
Sbjct: 292 LYASGSEDGTLRLWQTVVGKTYGLW 316
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 38/149 (25%), Positives = 75/149 (50%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
+ ++S+ + +VT S D +IRL+D+ A L T+ K V + HP
Sbjct: 288 HKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSL--HPDEFT 345
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
++S G ++++ + ++ F+GH+ V +LS+ +S + SG+ + ++ WD ++
Sbjct: 346 FAS--GSSDNIKHWKFPEGAFMGNFEGHNAIVNTLSI-NSDNVMFSGADNGSMCFWDWKS 402
Query: 153 -EKCQGLLRVQGRPAAAYDDQGLVFAVAF 180
K Q L V +P + + G +FA +F
Sbjct: 403 GHKYQELQSVV-QPGSLDSEAG-IFASSF 429
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 61/267 (22%), Positives = 112/267 (41%)
Query: 48 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107
YL + +D+ ++ +D+ ++ + GV HPT + + G D R+
Sbjct: 219 YLFSCGEDKMVKCWDLETNKVIRHYHGHLSGV--YALKLHPTLDVLVTA-GRDAVARVWD 275
Query: 108 LHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL---RVQGR 164
+ + + GH V SL++ ++GS+D T+ LWD A K L + R
Sbjct: 276 MRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVR 335
Query: 165 PAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT 224
+ + D+ FA I+ + K+ +G F + + G + N + ++D +M
Sbjct: 336 ALSLHPDE-FTFASGSSDNIKHW---KFPEGAF-MGNFEGHNAIVNTLSINSDN-VMFSG 389
Query: 225 TMEGHIHVLDSFRGTLLSTYN--VKPVSRNST---LEASFSPEGMFVISGSGDGSVYAWS 279
G + D G V+P S +S +SF G+ +I+ D SV +
Sbjct: 390 ADNGSMCFWDWKSGHKYQELQSVVQPGSLDSEAGIFASSFDKTGLRLITCEADKSVKIY- 448
Query: 280 VRSGKEVASWMSFDTEPPVIKWTPGSL 306
K+V + + +T P + WTP +L
Sbjct: 449 ----KQVDN-ATPETHPN-LPWTPSNL 469
Score = 111 (44.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 28/121 (23%), Positives = 52/121 (42%)
Query: 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGV-DLVCFTSHPTTVIY 93
G + +D + + T + D +I+++D+ + T+ V L HP Y
Sbjct: 164 GWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHP----Y 219
Query: 94 SSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE 153
G D+ ++ L NK +R++ GH V +L L + D ++ D +WD R
Sbjct: 220 LFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTR 279
Query: 154 K 154
+
Sbjct: 280 Q 280
Score = 72 (30.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 18/74 (24%), Positives = 35/74 (47%)
Query: 259 FSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE-LSF 317
F P+ V++GS D ++ W + +GK + + + P F +GSS+ +
Sbjct: 300 FDPQ---VVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDNIKH 356
Query: 318 W-IPDLSKLGAYVG 330
W P+ + +G + G
Sbjct: 357 WKFPEGAFMGNFEG 370
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 134 (52.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 40/155 (25%), Positives = 71/155 (45%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV--CFTSH 87
F +++G + +DFHK V+ DD I++++ CL T+ +D + F H
Sbjct: 47 FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH---LDYIRTTFFHH 103
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
I S+ + D+++R+ + + GH+ V+ ++D +S SLD+TV +
Sbjct: 104 EYPWILSASD--DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRV 161
Query: 148 WDQRAEKCQGLLRVQGRPAAAYDD-QGLVFAVAFG 181
WD GL + P A D +G+ FG
Sbjct: 162 WD-----ISGLRKKNLSPGAVESDVRGITGVDLFG 191
Score = 57 (25.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 257 ASFSPEGMFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
A+F P ++SG+ D V W + K EV + + P + ++ S +
Sbjct: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270
Query: 315 LSFWIPDLSK 324
S + D+SK
Sbjct: 271 KSIRVWDMSK 280
Score = 45 (20.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 252 NSTLEASFSPEGMFVISGSGDGSVYAW--SVRSG 283
N+ A F P ++S S D S+ W S R+G
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTG 283
>MGI|MGI:2145443 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2145443
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
ChiTaRS:UTP15 EMBL:AY151261 EMBL:AK049186 EMBL:AK162794
EMBL:BC034372 EMBL:BC065057 IPI:IPI00226889 RefSeq:NP_849249.1
UniGene:Mm.28221 ProteinModelPortal:Q8C7V3 SMR:Q8C7V3 STRING:Q8C7V3
PhosphoSite:Q8C7V3 PaxDb:Q8C7V3 PRIDE:Q8C7V3
Ensembl:ENSMUST00000040972 GeneID:105372 KEGG:mmu:105372
UCSC:uc007rom.1 InParanoid:Q8C7V3 NextBio:357640 Bgee:Q8C7V3
Genevestigator:Q8C7V3 GermOnline:ENSMUSG00000041747 Uniprot:Q8C7V3
Length = 528
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 59/258 (22%), Positives = 115/258 (44%)
Query: 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV 82
S E +F + F + LV S+D ++L+D+ L+ V V
Sbjct: 69 SQEPVKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDINGRAPLRQFEGHTKAVHTV 128
Query: 83 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK---DCFISG 139
FT+ V+ + D +++L + ++K + FK H D V C+SK D F++G
Sbjct: 129 DFTADNYHVVSGAD---DYTVKLWDIPNSKEILTFKEHSDYV--RCGCASKLNPDLFVTG 183
Query: 140 SLDRTVLLWDQRAEKCQGLLRVQ-GRPAAA---YDDQGLVFAVAFGGYIRMFDARKYEKG 195
S D TV ++D R K +L V+ G+P + + GL+ + A G Y++++D K G
Sbjct: 184 SYDHTVKIFDARTNK--NVLCVEHGQPVESVLLFPSGGLLVS-AGGRYVKVWDMLK---G 237
Query: 196 PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255
+ S+ + S+ G+ +L +++ + V + ++ +++ S L
Sbjct: 238 GQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAA----SIL 293
Query: 256 EASFSPEGMFVISGSGDG 273
+ S + ++ G +G
Sbjct: 294 SLALSHQDETIVVGMTNG 311
>UNIPROTKB|Q5E959 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9913 "Bos taurus" [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849
EMBL:BT021061 EMBL:BC119959 IPI:IPI00698102 RefSeq:NP_001015567.1
UniGene:Bt.17089 ProteinModelPortal:Q5E959 STRING:Q5E959
PRIDE:Q5E959 Ensembl:ENSBTAT00000018840 GeneID:510201
KEGG:bta:510201 CTD:11171 HOGENOM:HOG000174258 HOVERGEN:HBG055228
InParanoid:Q5E959 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
NextBio:20869325 Uniprot:Q5E959
Length = 350
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 59/265 (22%), Positives = 105/265 (39%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F + G + +K ++ TA+ D + +++D + L T+ + K+ V V FT
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDS 112
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
Y G D+ LR+ L+ + + GH + CS +S D+TV L
Sbjct: 113 N---YLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSAD-DKTVRL 168
Query: 148 WDQRA-EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI 206
WD + + L + Y +G + + +G I A + P F I
Sbjct: 169 WDHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLD--PIKSFEAPATI 226
Query: 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGM 264
+ A++ + ++ + ++ D G L +Y + P+ FSP+G
Sbjct: 227 NSASL---HPEKEFVVAGGEDFKLYKYDYNSGEELESYKGHFGPIHC-----VRFSPDGE 278
Query: 265 FVISGSGDGSVYAWSVRSGKEVASW 289
SGS DG++ W GK W
Sbjct: 279 LYASGSEDGTLRLWQTVVGKTYGLW 303
>UNIPROTKB|H0Y8P4 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
OMA:QFEGHTK EMBL:AC010279 HGNC:HGNC:25758 ChiTaRS:UTP15
Ensembl:ENST00000509005 Uniprot:H0Y8P4
Length = 545
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 72/283 (25%), Positives = 122/283 (43%)
Query: 14 LELSEEILQ-SMEVGMSFRDYNGRISSMDFHKSS--SYLVTASDDESIRLYDVTAATCLK 70
+E+S L S+E + +++ G +S +DF +Y VTAS I +Y + +K
Sbjct: 45 VEVSRRTLWGSVETPVQIKEF-GAVSKVDFSPQPPYNYAVTASS--RIHIYGRYSQEPIK 101
Query: 71 TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLC 130
T + K F ++ S++G ++L + LR F+GH V ++
Sbjct: 102 TFSRFKDTAYCATFRQDGRLLVAGSEDG---GVQLFDISGRAPLRQFEGHTKAVHTVDFT 158
Query: 131 SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG---RPAAAYD-DQGLVFAVAFGGYIRM 186
+ K +SG+ D TV LWD K + R A + L ++ ++M
Sbjct: 159 ADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKM 218
Query: 187 FDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV 246
FDAR E + SV +V+ F + G +L++ ++ V D +G L ++
Sbjct: 219 FDARTSES----VLSVEHGQPVESVLLFPSGG--LLVSAGGRYVKVWDMLKGGQLLV-SL 271
Query: 247 KPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW 289
K + T S G ++SGS D V +S S K V S+
Sbjct: 272 KNHHKTVTC-LCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 313
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 57/251 (22%), Positives = 102/251 (40%)
Query: 33 YNGRISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTV 91
++ +SS+ KS+ L+ T DD + ++ V C+ ++ ++ + ++ +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 92 IYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151
+ S++G S+R+ L K LR GH + SL SGSLD + LWD R
Sbjct: 79 VAGSQSG---SIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR 135
Query: 152 AEKC--QGLLRVQGRPAAAYDDQGLVFAVAFGGY-IRMFDARKYEKGPFDIFSVGGDISD 208
+ C + Q + G A A + ++++D G +F G
Sbjct: 136 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA---GKV-MFEFTGHSGP 191
Query: 209 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268
NVV+F L+ + + I D + ++S + L F+P+G +
Sbjct: 192 VNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCIL---FNPDGCCLYG 248
Query: 269 GSGDG-SVYAW 278
G D VY W
Sbjct: 249 GFQDSLRVYGW 259
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 59/246 (23%), Positives = 99/246 (40%)
Query: 21 LQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVD 80
L++ ++ + + I S+DFH S++ + S D I+L+DV C+ S V
Sbjct: 92 LEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVR 151
Query: 81 LVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS 140
C P +S D +++L L K + F GH V + S+ SGS
Sbjct: 152 --CLRFSPDGKWLASAAD-DHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGS 208
Query: 141 LDRTVLLWDQRAEKCQGLLRVQGRPAAA--YDDQGLVFAVAFGGYIRMFDARKYEKGPFD 198
DRT+ WD + + P ++ G F +R++ E+ FD
Sbjct: 209 SDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEP-ERC-FD 266
Query: 199 IFSVG-GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 257
+ V G ++D +V G +T+ V+D R T + + RN+ L A
Sbjct: 267 VVVVNWGKVADLSVCHNQLIGVSFAQSTVSSF--VVDLSRVTKSGSVP-HGLLRNNELLA 323
Query: 258 SFSPEG 263
+P G
Sbjct: 324 QPTPTG 329
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 55/234 (23%), Positives = 99/234 (42%)
Query: 10 DKVSLELSEEILQ---SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA 66
DK S ++ E I+ + E+ + + ++G + F +YL+++S+D ++RL+ +
Sbjct: 517 DKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 575
Query: 67 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS 126
TCL Y V F+ + Y G D RL + + LR F GH V
Sbjct: 576 TCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC 632
Query: 127 LSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAV-AFGGY 183
+ + +GS DRTV LWD C + P + + G A A G
Sbjct: 633 TRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 692
Query: 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237
+ ++D G + + G ++FS DG ++ +M+ + + D+ +
Sbjct: 693 VLLWDIGH---GLM-VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 742
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 46/190 (24%), Positives = 80/190 (42%)
Query: 100 DESL-RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 158
D+ L R++ L+ GH V S ++ +S S D TV LW + C L
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC--L 578
Query: 159 LRVQGRPAAAYDDQGLVFAVAF--GGY---IRMFDARKYEKGPFDIFSVGGDISDANVVK 213
+ +G +D Q + F GG+ R++ Y+ P IF+ G ++D N +
Sbjct: 579 VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ--PLRIFA--GHLADVNCTR 634
Query: 214 FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273
F + + + + + + D G + + +S +FSP G F+ +G+ DG
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL---TFSPNGRFLATGATDG 691
Query: 274 SVYAWSVRSG 283
V W + G
Sbjct: 692 RVLLWDIGHG 701
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 54/248 (21%), Positives = 103/248 (41%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
++S+ F + L +AS D+++RL+ + + V V F++ ++ +S+
Sbjct: 63 VTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASE 122
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D+S+++ S++ ++L H V +S S D+T+ +WD +++C
Sbjct: 123 ---DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCV 179
Query: 157 GLLR--VQGRPAAAYDDQGLVFAVAFGGY-IRMFDARKYEK-GPFDIFSVGGDISDANVV 212
V + G A A + +R++D R + + S G N +
Sbjct: 180 NNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCG-----VNCL 234
Query: 213 KFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGMFVISGS 270
F G ++ + +G + +LD G L+ T + PV SFS +G SG
Sbjct: 235 SFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPV-----FTVSFSKDGELFTSGG 289
Query: 271 GDGSVYAW 278
D V W
Sbjct: 290 ADAQVLVW 297
Score = 135 (52.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 57/231 (24%), Positives = 94/231 (40%)
Query: 99 WDESLRLLSL--HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW--DQRAEK 154
WD L L SL H Y RY GH D V SL + S S D+TV LW D++ +
Sbjct: 38 WDTFLMLWSLKPHARAY-RYV-GHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKS 95
Query: 155 CQGLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANV 211
+ + P + D D + + I+++ + F ++S+
Sbjct: 96 SE--FKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQR---F-LYSLYRHTHWVRC 149
Query: 212 VKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 271
KFS DGRL++ + + I + D+ ++ ++ N FSP G + S
Sbjct: 150 AKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFV---DFSPNGTCIASAGS 206
Query: 272 DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
D +V W +R + + + + + P VT SS+ + I DL
Sbjct: 207 DHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDL 257
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 62/290 (21%), Positives = 119/290 (41%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSKKYGVDLVCFTSHP 88
F+ + I+S DF + + TAS D + L+ + A + + K L F+
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQ-FSPQG 72
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
+ +S+ D+++RL L FK H V S+ + ++ S D+++ +W
Sbjct: 73 NLLASASR---DKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVW 129
Query: 149 DQRAEK-CQGLLR-VQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGD 205
++ L R A + G L+ + + I+++D K + FS
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTS--KQCVNNFS--DS 185
Query: 206 ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265
+ AN V FS +G + + + + D LL Y V N SF P G
Sbjct: 186 VGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCL---SFHPSGNS 242
Query: 266 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPP-VIKWTPGSLMFVTGSSE 314
+++ S DG+V + G+ + + + T P + ++ +F +G ++
Sbjct: 243 LVTASSDGTVKILDLVEGRLIYT-LQGHTGPVFTVSFSKDGELFTSGGAD 291
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 30/122 (24%), Positives = 63/122 (51%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F D G + +DF + + + +A D ++R++D+ L+ GV+ C + HP
Sbjct: 181 NFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVN--CLSFHP 238
Query: 89 T--TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
+ +++ +S +G ++++L L + + + +GH V ++S + F SG D VL
Sbjct: 239 SGNSLVTASSDG---TVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVL 295
Query: 147 LW 148
+W
Sbjct: 296 VW 297
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 64/282 (22%), Positives = 125/282 (44%)
Query: 19 EILQSMEVGMSFRDYNGRISSMDFHK-----SSSYLVTASDDESIRLYDV-TAATCLKTI 72
+I+ S+ G S + R ++++H+ L T ++ I+++DV T L +
Sbjct: 108 DIVWSLAFGSSVPEKQSRCVNIEWHRFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLV 167
Query: 73 NSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN-KYLRYFKGHHDRVVSLSLCS 131
+ + DL F + ++ S+ D++LR+ L D+ ++ +GH + V S +
Sbjct: 168 DHTEVVRDLT-FAPDGSLILVSASR--DKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSP 224
Query: 132 SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP----AAAYDDQGLVFAVA-FGGYIRM 186
S + V LWD +K + +++G A + G + A A + + +
Sbjct: 225 DSSMLCSVGASKAVFLWDM--DKYTMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYI 282
Query: 187 FDARK----YEKG-----PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237
+D E G P IF+ G + V FS+DG L + + + + + +R
Sbjct: 283 WDPHTGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDG-LHVASLADDKM--VRFWR 339
Query: 238 GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWS 279
+ Y V+ ++ L +FS +G + +G+ DGSVY W+
Sbjct: 340 --IDEDYPVQVAPLSNGLCCAFSTDGSVLAAGTHDGSVYFWA 379
>CGD|CAL0004633 [details] [associations]
symbol:orf19.7343 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 116 (45.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 261 PEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIP 320
P+G +SG DG V+ W +RSG+ + + + W+P FVTGS + S I
Sbjct: 280 PDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDCSLKIW 339
Query: 321 DLSKL 325
DL KL
Sbjct: 340 DLRKL 344
Score = 65 (27.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/59 (25%), Positives = 33/59 (55%)
Query: 93 YSSKNGWDESLRLLSLHD-NKYLRYFKG-HHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
Y + WD S+ LL+ D + + + G H++++ LS ++ + +SG + T+ +W+
Sbjct: 125 YIACGSWDGSINLLNSQDLSIFKKTPSGFHNEKISGLSWNNNDNQLVSGGNEGTINIWN 183
>UNIPROTKB|Q5A3W6 [details] [associations]
symbol:PRP4 "Potential spliceosomal U4/U6 snRNP protein
Prp4p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 116 (45.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 261 PEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIP 320
P+G +SG DG V+ W +RSG+ + + + W+P FVTGS + S I
Sbjct: 280 PDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDCSLKIW 339
Query: 321 DLSKL 325
DL KL
Sbjct: 340 DLRKL 344
Score = 65 (27.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/59 (25%), Positives = 33/59 (55%)
Query: 93 YSSKNGWDESLRLLSLHD-NKYLRYFKG-HHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
Y + WD S+ LL+ D + + + G H++++ LS ++ + +SG + T+ +W+
Sbjct: 125 YIACGSWDGSINLLNSQDLSIFKKTPSGFHNEKISGLSWNNNDNQLVSGGNEGTINIWN 183
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 118 (46.6 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 47/188 (25%), Positives = 76/188 (40%)
Query: 10 DKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL 69
DK SL L E L S + +F + + S+ F + +V+ S D +I+L++ T C
Sbjct: 84 DK-SLRLWE--LSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWN-TLGDCK 139
Query: 70 KTINSKKYG--VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSL 127
TI K + V V F+ +P + S GWD+ +++ L + GH + ++
Sbjct: 140 YTITDKGHTEWVSCVRFSPNPQNPVIVSA-GWDKLVKVWELASCRLQTDHIGHTGYINTV 198
Query: 128 SLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGLVFAVAFGGYIRM 186
++ SG D +LWD K L A + A I +
Sbjct: 199 TISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDEIHALVFSPNRYWLCAATSSSITI 258
Query: 187 FDARKYEK 194
FD K K
Sbjct: 259 FDLEKKSK 266
Score = 114 (45.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
Y+ WD+SLRL L + R F GH + V+S+S + +SGS DRT+ LW+
Sbjct: 77 YALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLG 136
Query: 153 EKCQGLLRVQG 163
+ C+ + +G
Sbjct: 137 D-CKYTITDKG 146
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 258 SFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSF 317
+ SP+G SG DG W + K + S + D E + ++P +S S
Sbjct: 199 TISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGD-EIHALVFSPNRYWLCAATSS-SI 256
Query: 318 WIPDLSK 324
I DL K
Sbjct: 257 TIFDLEK 263
Score = 44 (20.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 258 SFSPEGMFVISGSGDGSVYAWSVRS 282
++S +G + +G D + AW V S
Sbjct: 290 AWSADGQTLFAGYTDNKIRAWGVMS 314
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/139 (24%), Positives = 65/139 (46%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSH 87
+F + + M F + + L T + D I+++ + + CL+ + GV + F+
Sbjct: 259 NFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKD 318
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
T ++ +S +D+++R+ L K L+ F+GH V +L IS S D TV +
Sbjct: 319 STQILSAS---FDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPDGHHAISASSDGTVKV 375
Query: 148 WDQRAEKCQGLLRVQGRPA 166
W+ + +C + G A
Sbjct: 376 WNMKTTECTSTFKSLGTSA 394
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 115 (45.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 39/121 (32%), Positives = 55/121 (45%)
Query: 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP---TTVIYSS------ 95
+S +VT+S D+SI L+ +T K YGV T H V+ SS
Sbjct: 27 NSDVIVTSSRDKSIILWKLTK-------EDKSYGVAQRRMTGHSHFVQDVVLSSDGQFAL 79
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
WD LRL L + R F GH V+S++ + +S S DRT+ LW+ E C
Sbjct: 80 SGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGE-C 138
Query: 156 Q 156
+
Sbjct: 139 K 139
Score = 113 (44.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 34/134 (25%), Positives = 64/134 (47%)
Query: 21 LQSMEVGMSFRDYNGR---ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY 77
L + G S R + G + S+ F + +V+AS D +I+L++ T C TI+
Sbjct: 89 LWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEADG 147
Query: 78 GVDLV-CFTSHPTTVIYSSKNG-WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDC 135
+ V C P T++ + + WD+++++ +L + K GH + ++++
Sbjct: 148 HKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSL 207
Query: 136 FISGSLDRTVLLWD 149
SG D +LLWD
Sbjct: 208 CASGGKDGVILLWD 221
Score = 61 (26.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 260 SPEGMFVISGSGDGSVYAWSVRSGKEVAS 288
SP+G SG DG + W + GK++ S
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGKKLYS 230
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 258 SFSPEGMFVISGSGDGSVYAWSV 280
++S +G + SG DG + W +
Sbjct: 301 NWSADGNTLFSGYTDGVIRVWGI 323
>UNIPROTKB|Q5ZJW8 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0031572 "G2
DNA damage checkpoint" evidence=ISS] [GO:0031465 "Cul4B-RING
ubiquitin ligase complex" evidence=ISS] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0019985 "translesion
synthesis" evidence=ISS] [GO:0009411 "response to UV" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006513 "protein monoubiquitination" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 EMBL:AJ720316
IPI:IPI00592297 RefSeq:NP_001026219.1 UniGene:Gga.20498
ProteinModelPortal:Q5ZJW8 STRING:Q5ZJW8 Ensembl:ENSGALT00000015990
GeneID:421373 KEGG:gga:421373 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 InParanoid:Q5ZJW8 OMA:ICTYFHR
OrthoDB:EOG4N5VWH NextBio:20824150 Uniprot:Q5ZJW8
Length = 720
Score = 97 (39.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 170 DDQGLVFAVAFGGYIRMFDARK----YEKGPF---DIFSVGGD---ISDANVVKFSNDGR 219
D+ L+ A A G I+++D RK Y + P F G + +++V S
Sbjct: 223 DEHTLISAGAVDGVIKVWDLRKNYAAYRQDPVPSKSFFYPGTSTRKLGYSSLVLDSTGAN 282
Query: 220 LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS--RNST--LEASFSPEGMFVISGSGDGSV 275
L T + I++ F T L T+ V S +NST +++S SP+ F++SGS D +
Sbjct: 283 LFANCT-DDSIYM---FNMTSLKTFPVAVFSGHQNSTFYIKSSISPDDQFLVSGSSDCNA 338
Query: 276 YAWSVRSGK-EVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
Y W V + E I W P + S+
Sbjct: 339 YIWKVSEPSLPPRILVGHSQEVTSIAWCPSDFTKIATCSD 378
Score = 90 (36.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 33/149 (22%), Positives = 61/149 (40%)
Query: 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCF 84
E+GM + S+ L A+++ +RLYD A K I+ + F
Sbjct: 41 EIGMPVPPFGCSFSAAP--NFEHVLAVANEEGFVRLYDTEAQNTTKLISKEWQAHSNAVF 98
Query: 85 TSH--PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFISGSL 141
P + +G D++ ++ + + L KGH + S++ K F +G
Sbjct: 99 DLAWVPGEHRIVTASG-DQTAKVWDVRAGELLGICKGHQCSLKSVAFSRFEKAVFCTGGR 157
Query: 142 DRTVLLWDQRAEKCQGLLRVQGRPAAAYD 170
D +++WD R K G R + + A++
Sbjct: 158 DGNIMVWDTRCNKKDGFYRQVNQISGAHN 186
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 47/166 (28%), Positives = 73/166 (43%)
Query: 117 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC-QGLLRVQGR-PAAAYDDQGL 174
F GH V+SLSL F+SG+ D ++ LWD R C Q + + A A+ G
Sbjct: 80 FAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGY 139
Query: 175 VFAVAFG-GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVL 233
F R+FD R ++ ++S I V FS GRL+L + + ++
Sbjct: 140 AFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIW 197
Query: 234 DSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWS 279
D+ +G +R S L + +GM V +GS D + W+
Sbjct: 198 DAMKGDRAGVLAGHD-NRVSCL--GVTDDGMAVATGSWDSFLKIWN 240
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 141 (54.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 67/310 (21%), Positives = 128/310 (41%)
Query: 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTV-I 92
N ++ FH +S+ LV +Y++ + T L ++ + +D + S + I
Sbjct: 254 NSKLRCAAFHPTSNLLVVGFSSGLFGIYELPSFTMLYQLSITQSNIDTLTVNSTGDWIAI 313
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
SSK G L + Y+ + H+D + +L S I+G+ D + +WD +
Sbjct: 314 GSSKLG---QLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNS 370
Query: 153 EKCQGLLRVQGRPAAA---YDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD 208
C + Q A + + +G ++F+ + G +R +D +Y F F+ +
Sbjct: 371 GFCI-VTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRN--FRTFTAPSRVQ- 426
Query: 209 ANVVKFSNDGRLMLLTTMEG-HIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGMF 265
+ + G ++ + + I + G LL T + PVS SF+ G
Sbjct: 427 FSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVS-----SLSFNSSGSL 481
Query: 266 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP-GSLMFVTG-SSELSFWIPDLS 323
+ SGS D +V W + S + + ++ + + P G + V +L+FW
Sbjct: 482 LASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFHPDGKEVCVASLDGQLTFWNVQEG 541
Query: 324 KLGAYV-GRK 332
K + + GRK
Sbjct: 542 KQTSLIDGRK 551
Score = 44 (20.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 31 RDYNGR---ISSMDFHKSSSYLVTASDDESIRLYDV 63
R+Y G I S+ + S + ++ S D + RL+ V
Sbjct: 140 REYTGHFDDIVSISWSADSRFFISTSKDLTARLHSV 175
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 51 TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 110
T SDD +++L+D+ ++T + Y V V F +I G D +++ L
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNT-YQVLAVTFNDTSDQII---SGGIDNDIKVWDLRQ 225
Query: 111 NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151
NK +GH D V LSL S +S ++D TV +WD R
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 131 (51.2 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 63/256 (24%), Positives = 113/256 (44%)
Query: 80 DLVCFTSHPTTVIYSSKNGWDESLRLLSLH-DNKYLRYFKGHHDRVVSLSLCSSKDCFIS 138
++ C HP +S G+D + L S++ D KGH V+ L + S
Sbjct: 69 EVYCCKFHPNGSTLASA-GFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFS 127
Query: 139 GSLDRTVLLWDQRAEKCQGLLRVQGRPA---AAYDDQ-G--LVFAVAFGGYIRMFDARKY 192
S D+TV +WD +E + + R++G + + Y + G LV + G ++++D RK
Sbjct: 128 ASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK- 184
Query: 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252
K F + V F++ ++ ++ I V D + L TY ++ + +
Sbjct: 185 -KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA-D 237
Query: 253 STLEASFSPEGMFVISGSGDGSVYAWSVR--SGKE----VASWMSFDTEPPVIK--WTPG 304
S S S EG +++S + D +V W VR + KE + + E +++ W+P
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 305 SLMFVTGSSELSFWIP 320
GS++ SF P
Sbjct: 298 GSKIAAGSAD-SFLYP 312
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 54/262 (20%), Positives = 113/262 (43%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY-GVDLVCFTSHPTTV 91
+ G I ++ ++K +Y+++A D++ ++D + C + +D+ T
Sbjct: 450 HKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDV----DWQTNQ 505
Query: 92 IYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151
++S + D+ + + L N+ ++ FKGH + V ++ C S S D T+ +W
Sbjct: 506 AFASCST-DQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMN 564
Query: 152 AEKCQGLLRVQGR-----------PAAAYDDQGLVFAVA-FGGYIRMFDARKYEKGPFDI 199
++C L+ + P + L+ A A F +R++D E+G I
Sbjct: 565 RDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDV---ERGSC-I 620
Query: 200 FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259
++ V FS DG+ + + + +H+ + G L+ +Y E +
Sbjct: 621 HTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYK----GTGGIFEVCW 676
Query: 260 SPEGMFVISGSGDGSVYAWSVR 281
+ +G V + + DGSV+ +R
Sbjct: 677 NSKGTKVGASASDGSVFVLDLR 698
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 125 (49.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 62/278 (22%), Positives = 112/278 (40%)
Query: 48 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107
YL +AS D SIR++D C K + V C ++YSS D ++++
Sbjct: 231 YLASASKDGSIRIWDTLMGRCDKILTGHTQSV--TCVKWGGDGLLYSSSQ--DRTIKVWR 286
Query: 108 LHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLLWDQRAEKCQGLLRVQGRPA 166
D R +GH V +++L S D + +G+ + + + + L ++ +
Sbjct: 287 SQDGILCRTLQGHAHWVNTMAL--STDYVLRTGAFEPAEATINPQ-DMSGSLAELKDKAQ 343
Query: 167 AAYDD---QGLVFAVAFGGYIRMFDARKYE-KGPFDIFSVGGDISDANVVKFSNDGRLML 222
YD QG V+ +F R E K P + + G + N V FS D R++
Sbjct: 344 QRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMT--GHQALINQVLFSPDTRIIA 401
Query: 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282
+ + I + + G L++ VS + + ++S + ++SGS D ++ W +
Sbjct: 402 SASFDKSIKLWEGRTGKYLTSLRGH-VS--AVYQIAWSADSRLLVSGSSDSTLKVWDAET 458
Query: 283 GKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318
K E W+P +G + L W
Sbjct: 459 KKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 92 (37.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 259 FSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LS 316
FSP+ + S S D S+ W R+GK + S + I W+ S + V+GSS+ L
Sbjct: 393 FSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLK 452
Query: 317 FWIPDLSKL 325
W + KL
Sbjct: 453 VWDAETKKL 461
Score = 91 (37.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 55/270 (20%), Positives = 104/270 (38%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
S + + S+ F + YL + S D ++R +D++ T T ++ V + ++
Sbjct: 122 SLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDG 181
Query: 89 TTVIYSSKNG----WDESLRLLSLHDNKYLRYFKGHHDRVVSLS---LCSSKDC--FISG 139
+ KN WD + N+ R GH + L L + +C S
Sbjct: 182 KKLASGCKNSQIFLWDPAT------GNQIGRVLTGHSKWITCLCWEPLHINPECRYLASA 235
Query: 140 SLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPF 197
S D ++ +WD +C +L Q + GL+++ + I+++ + + G
Sbjct: 236 SKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVW---RSQDGIL 292
Query: 198 DIFSVGGDISDANVVKFSNDG--RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255
++ G N + S D R E I+ D G+L + K R +
Sbjct: 293 -CRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQD-MSGSLAELKD-KAQQRYDKV 349
Query: 256 EASFSPEGMFVISGSGDGSVYAWSVRSGKE 285
PE + +SGS D +++ W K+
Sbjct: 350 RGQ-GPERL--VSGSDDFTLFLWRPAEDKK 376
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 34/165 (20%), Positives = 73/165 (44%)
Query: 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTT 90
R + G ++ + H + YL+++SDD+ D+ L + + G L C HP
Sbjct: 304 RAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDG 363
Query: 91 VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQ 150
+I+ + D +++ L + + F GH + S++ + + + D +V LWD
Sbjct: 364 LIFGTGT-MDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL 422
Query: 151 RAEKCQGLLRVQGR---PAAAYDDQGLVFAVAFGGYIRMFDARKY 192
R K L++ + +D G A+ G ++++ +++
Sbjct: 423 RKLKNFKTLQLDNNFEVKSLIFDQSGTYLALG-GTDVQIYICKQW 466
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSHP 88
F ++ I + F K +L T S D I+++ + + CL+ + GV + F+ +
Sbjct: 271 FMMHDDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNS 330
Query: 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
T ++ S +D SL++ L K L+ F+GH V +D IS S D + +W
Sbjct: 331 TQILSGS---FDSSLKIHGLKSGKALKIFRGHQSFVNDCCFNHDEDRVISCSSDGKIKIW 387
Query: 149 DQRAEKC 155
D ++ C
Sbjct: 388 DAKSSDC 394
>UNIPROTKB|E1BDF6 [details] [associations]
symbol:E1BDF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 IPI:IPI00732803 OMA:LAYACDD
EMBL:DAAA02027701 EMBL:DAAA02027702 EMBL:DAAA02027703
ProteinModelPortal:E1BDF6 Ensembl:ENSBTAT00000049661 Uniprot:E1BDF6
Length = 351
Score = 135 (52.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 41/190 (21%), Positives = 85/190 (44%)
Query: 95 SKNGWDESLRLLSLHDNKYLRY--FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQR 151
+ +D++ + L ++ ++ ++GH D V L S+ D F++ S D+T+ +WD R
Sbjct: 71 ASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVR 130
Query: 152 AEKCQGLLRVQGRPAA-AYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDAN 210
KC + +G + ++ +G + +F + G + + G +
Sbjct: 131 TTKCIATVNTKGNCSELCWEPEGQTIDCNSKDDLLLF----LDAGDYRMTGEGQFSFQSQ 186
Query: 211 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270
+VK+ N ++ L+ G +H+L+ + + N P ++ + F P G + +GS
Sbjct: 187 IVKWQNQYNIVKLSNHCGWVHILNYPELKPVQSINAHP---SNCICIKFDPMGKYFATGS 243
Query: 271 GDGSVYAWSV 280
D V W V
Sbjct: 244 ADALVSLWDV 253
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 142 (55.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/145 (26%), Positives = 70/145 (48%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F +++G + +DFH + V+ DD I++++ CL T+N V V F HP
Sbjct: 47 FEEHDGPVRGIDFHPTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFF--HPE 104
Query: 90 TV-IYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
I S+ + D+++R+ + + + GH+ V+ ++D S SLD++V +W
Sbjct: 105 LPWILSASD--DQTIRIWNWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIW 162
Query: 149 DQRAEKCQGLLRVQGRPAA-AYDDQ 172
D GL + P +++DQ
Sbjct: 163 D-----ISGLRKKHSAPTTMSFEDQ 182
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 51 TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 110
T SDD +++L+D+ ++T + Y V V F +I G D +++ L
Sbjct: 169 TGSDDGTVKLWDIRKKAAIQTFQNT-YQVLAVTFNDTSDQII---SGGIDNDIKVWDLRQ 224
Query: 111 NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151
NK +GH D V LSL S +S ++D TV +WD R
Sbjct: 225 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 60/257 (23%), Positives = 113/257 (43%)
Query: 80 DLVCFTSHPTTVIYSSKNGWDESLRLLSLH-DNKYLRYFKGHHDRVVSLSLCSSKDCFIS 138
++ C HP +S G+D + L +++ D KGH V+ L + S
Sbjct: 68 EVYCCKFHPNGSTLASA-GFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFS 126
Query: 139 GSLDRTVLLWDQRAEKCQGLLRVQGRPA---AAYDDQ-G--LVFAVAFGGYIRMFDARKY 192
S D+TV +WD +E + + R++G + + Y + G LV + G ++++D RK
Sbjct: 127 ASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK- 183
Query: 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252
K F + V F++ ++ ++ I V D + L TY ++ + +
Sbjct: 184 -KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA-D 236
Query: 253 STLEASFSPEGMFVISGSGDGSVYAWSVR--SGKE----VASWMSFDTEPPVIK--WTPG 304
S S S EG +++S + D +V W VR + KE + + E +++ W+P
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 296
Query: 305 SLMFVTGSSELSFWIPD 321
GS++ ++ D
Sbjct: 297 GSKIAAGSADRFVYVWD 313
>SGD|S000003648 [details] [associations]
symbol:MDV1 "Peripheral protein of cytosolic face of
mitochondrial outer membrane" species:4932 "Saccharomyces
cerevisiae" [GO:0005741 "mitochondrial outer membrane"
evidence=IEA;IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI;IMP]
[GO:0000266 "mitochondrial fission" evidence=IGI;IMP;IPI]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016559 "peroxisome fission"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003648 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741 EMBL:BK006943
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000002
GO:GO:0016559 GO:GO:0043130 GeneTree:ENSGT00550000075528
HOGENOM:HOG000048466 OrthoDB:EOG469V30 GO:GO:0000266 PDB:2PQN
PDB:3UUX PDBsum:2PQN PDBsum:3UUX EMBL:Z49387 PIR:S56893
RefSeq:NP_012423.1 PDB:2XU6 PDBsum:2XU6 ProteinModelPortal:P47025
SMR:P47025 DIP:DIP-1907N IntAct:P47025 MINT:MINT-389558
STRING:P47025 PaxDb:P47025 EnsemblFungi:YJL112W GeneID:853332
KEGG:sce:YJL112W CYGD:YJL112w OMA:YSSPYKK EvolutionaryTrace:P47025
NextBio:973700 Genevestigator:P47025 GermOnline:YJL112W
InterPro:IPR021061 Pfam:PF11542 Uniprot:P47025
Length = 714
Score = 117 (46.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL 159
D +RL L K +R KGH D + SL S+ C ++GS DRTV +WD R GLL
Sbjct: 585 DGVVRLWDLRSGKVIRTLKGHTDAITSLKFDSA--CLVTGSYDRTVRIWDLRT----GLL 638
Query: 160 R---VQGRPAAAYD--DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKF 214
P + D + VA ++++D+ K E + G + S + VK+
Sbjct: 639 NKFHAYSAPVLSLDLFQENAAVVVADEPSVQIYDSEKDES--WSCVEQGNETS-VSTVKY 695
Query: 215 SND 217
+
Sbjct: 696 KEN 698
Score = 104 (41.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 4 SQSEREDKVSLELSEEILQ-SMEVGMSFRDYNGRISSMDFHKSSSYLVTASD-DESIRLY 61
S+S++ + S +++ + ++G ++ ++ +DF L TA D +++++
Sbjct: 367 SKSKKRHRKSFPTFQQLYEPGTKIGSIMSTHDDFLTCLDFDAPFGTLCTAGYLDHTVKIW 426
Query: 62 DVTA-------ATCLKTIN----SKKYGVDLVCFTSHPTTVIYS---SKNGWDESLRLLS 107
D++ A L TIN ++ YG LV +++ ++ + E+ L S
Sbjct: 427 DLSKQNKIGELAGHLATINCMQINRDYGT-LVTGGRDAALKLWNLNLAQQLYQETQNLTS 485
Query: 108 L--H-DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
H D+ + F+ H D V +LSL S +SGS DRT+ WD R+ KC
Sbjct: 486 PTNHIDSPCVHTFEAHTDEVTALSLDPS--FLVSGSQDRTIRQWDLRSGKC 534
Score = 67 (28.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 13/45 (28%), Positives = 27/45 (60%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73
+F + ++++ S+LV+ S D +IR +D+ + CL+TI+
Sbjct: 497 TFEAHTDEVTALSL--DPSFLVSGSQDRTIRQWDLRSGKCLQTID 539
Score = 66 (28.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 233 LDSFRGTLLSTYNVKP-VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMS 291
+D + TLL+ N +P + + +A+ + +G+ DG V W +RSGK + +
Sbjct: 552 VDLSKSTLLTQRNERPSIGALQSFDAALA-------TGTKDGVVRLWDLRSGKVIRTLKG 604
Query: 292 FDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
+K+ L VTGS + + I DL
Sbjct: 605 HTDAITSLKFDSACL--VTGSYDRTVRIWDL 633
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 56/252 (22%), Positives = 109/252 (43%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
++++ F+KS S +T S D + +++D + L T+ + V + F ++P Y K
Sbjct: 95 LTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAF-NNP----YGDK 149
Query: 97 ---NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE 153
+D++ +L S K F+GH +V L+ +GS+D T LWD E
Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD--VE 207
Query: 154 KCQGLLRVQGRPAA----AYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD 208
+ + + G A ++ G + +F ++D K + + G +
Sbjct: 208 SGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRK----VHVLSGHRGE 263
Query: 209 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNS-TLEASFSPEGMFVI 267
+ V+F+ D L+ +++ V D+ G L+T + N L+ F+ G +
Sbjct: 264 ISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATL----LGHNDEVLDVCFNYTGQLIA 319
Query: 268 SGSGDGSVYAWS 279
+ S DG+ +S
Sbjct: 320 TASADGTSRVFS 331
Score = 132 (51.5 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 47/238 (19%), Positives = 103/238 (43%)
Query: 49 LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108
+ T S D++ +L+ C T + ++VC +P + + ++ D + +L +
Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTFRG--HTAEIVCLAFNPQSTLVAT-GSMDTTAKLWDV 206
Query: 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD-QRAEKCQGLLRVQGRPAA 167
+ + GH ++SL ++ D ++GS D T +LWD K L +G +
Sbjct: 207 ESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISC 266
Query: 168 A-YD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT 225
++ D L+ + +++DA +G + ++ G + V F+ G+L+ +
Sbjct: 267 VQFNWDCSLIATASLDKSCKVWDA----EGGQCLATLLGHNDEVLDVCFNYTGQLIATAS 322
Query: 226 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283
+G V + T ++ + + F+ +G V++ S D + W V++G
Sbjct: 323 ADGTSRVFST--DTFQCLCQLEG-HKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTG 377
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
+N + + F+ + + TAS D + R++ CL + K + VCF + + V+
Sbjct: 302 HNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVL 361
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148
+S D++ R+ + L+ +GH D + S + D I+GS D T +W
Sbjct: 362 TASV---DKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 133 (51.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV--CFTSH 87
F +++G + +DFHK V+ DD I++++ CL T+ +D + F H
Sbjct: 47 FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH---LDYIRTTFFHH 103
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
I S+ + D+++R+ + + GH+ V+ S+D +S SLD+TV +
Sbjct: 104 EYPWILSASD--DQTIRIWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRV 161
Query: 148 WD 149
WD
Sbjct: 162 WD 163
Score = 55 (24.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 257 ASFSPEGMFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314
A+F P ++SG+ D V W + K E+ + + P + ++ S +
Sbjct: 212 AAFHPSMPLIVSGADDRQVKIWRMNESKAWELDTCRGHYNNVSCAVFHPRQELILSNSED 271
Query: 315 LSFWIPDLSK 324
S + D+SK
Sbjct: 272 KSIRVWDMSK 281
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 232 VLDSFRGTLL--STYNVKPVSRNSTLEASFSPEG 263
VL R T L STY++ + R S + +PEG
Sbjct: 378 VLLCTRATNLENSTYDLYSIPRESDSQNPDAPEG 411
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 138 (53.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 56/255 (21%), Positives = 105/255 (41%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92
+ + S+ + S L +ASDD +++++D + T+ V V F SH + ++
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIF-SHDSRLL 353
Query: 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA 152
S+ D ++++ +GH D V S+ S S D TV +WD
Sbjct: 354 ASAS---DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 410
Query: 153 EKCQGLL---RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDA 209
Q L R R D L+ + + ++++D G ++ G
Sbjct: 411 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT---GSLQ-HTLEGHRDWV 466
Query: 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL--EASFSPEGMFVI 267
V FS+D RL+ + + + + D+ +G+ T + +S+L SFS + +
Sbjct: 467 RSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHT-----LEGHSSLVTSVSFSHDSRLLA 521
Query: 268 SGSGDGSVYAWSVRS 282
S S D +V W + +
Sbjct: 522 SASNDQTVRIWDIEA 536
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 32/120 (26%), Positives = 56/120 (46%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+ S+ F S L +ASDD +++++D + T+ + V V F SH + ++ S+
Sbjct: 424 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF-SHDSRLLASAS 482
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
+ D ++R+ + +GH V S+S S S D+TV +WD A Q
Sbjct: 483 D--DRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQ 540
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 136 (52.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 67/307 (21%), Positives = 138/307 (44%)
Query: 3 GSQSEREDKVSLELSEEILQSMEVGMSFRDYNGRISSMDFHK-----SSSYLVTASDDES 57
GSQ + + ++ + I+ S+ G S + R ++++H+ L T ++
Sbjct: 93 GSQRNKPCEHIIDCGD-IVWSLAFGSSVPEKQSRCVNIEWHRFKFGQDQLLLATGLNNGR 151
Query: 58 IRLYDV-TAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN-KYLR 115
I+++DV T L ++ + DL F + ++ S+ D++LR+ L D+ ++
Sbjct: 152 IKIWDVYTGKLLLNLMDHTEVVRDLT-FAPDGSLILVSASR--DKTLRVWDLKDDGNMMK 208
Query: 116 YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP----AAAYDD 171
+GH + V + S + V LWD +K + +++G A +
Sbjct: 209 VLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDM--DKYSMIRKLEGHHNDVVACEFSP 266
Query: 172 QGLVFAVA-FGGYIRMFDA------RKYEK---GPFDIFSVGGDISDANVVKFSNDGRLM 221
G + A A + + ++D R++ P IF+ G + V FS+DG L
Sbjct: 267 DGALLATASYDTRVYVWDPYIGVILREFGHLFPPPTPIFAGGANDRWVRSVSFSHDG-LH 325
Query: 222 LLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 281
+ + + + + +R + Y V+ N+ L +FS +G + +G+ DGSV+ W+
Sbjct: 326 IASLADDKM--VRFWR--IDEEYPVQVAPLNNGLCCTFSTDGSVLAAGTQDGSVHFWA-- 379
Query: 282 SGKEVAS 288
+ ++V+S
Sbjct: 380 TPRQVSS 386
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 121 (47.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 37/138 (26%), Positives = 69/138 (50%)
Query: 33 YNGRISSMDFH-KSSSYLVTASDDESIRLYDVTAA--TCLKTINSKKYG----VDLVCFT 85
+NG ++ + + K +++AS D+++ ++ +T T + YG + V +
Sbjct: 14 HNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLS 73
Query: 86 SHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTV 145
S Y+ WD++LRL L K R F+GH V+S++ + +SGS D+T+
Sbjct: 74 SDGN---YALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTI 130
Query: 146 LLWDQRAEKCQGLLRVQG 163
LW+ AE C+ ++ G
Sbjct: 131 KLWNTLAE-CKFTIQEDG 147
Score = 118 (46.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 44/177 (24%), Positives = 80/177 (45%)
Query: 21 LQSMEVGMSFRDYNGR---ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY 77
L + G + R + G + S+ F + +V+ S D++I+L++ T A C TI +
Sbjct: 90 LWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN-TLAECKFTIQEDGH 148
Query: 78 G--VDLVCFT-SHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 134
V V F+ +H +I S GWD ++++ +L + K GH+ + ++++
Sbjct: 149 TDWVSCVRFSPNHSNPIIVSC--GWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGS 206
Query: 135 CFISGSLDRTVLLWDQRAEKCQGLLRVQGRP---AAAYDDQGLVFAVAFGGYIRMFD 188
SG D LLWD K L ++ A + VA+G I+++D
Sbjct: 207 LCTSGGKDSKALLWDLNDGK--NLYTLEHNDIINALCFSPNRYWLCVAYGPSIKIWD 261
Score = 52 (23.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 260 SPEGMFVISGSGDGSVYAWSVRSGKEV 286
SP+G SG D W + GK +
Sbjct: 202 SPDGSLCTSGGKDSKALLWDLNDGKNL 228
Score = 44 (20.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 246 VKPVSRNST---LEASFSPEGMFVISGSGDGSVYAWSV 280
V P S+ L ++S +G + +G D ++ W V
Sbjct: 276 VSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 313
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 135 (52.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 64/260 (24%), Positives = 113/260 (43%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTV 91
++ + S+ F + L + S D +I+L++ +A+ LK T+ V+ V F
Sbjct: 82 HSSSVQSVAFSPNGQLLASGSSDTTIKLWN-SASDSLKHTMEGHSDRVESVAF------- 133
Query: 92 IYSSKNG--WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149
S NG W+ ++ L H +GH D V+S++ SGS ++T+ LWD
Sbjct: 134 ---SPNGQLWNPAIGSLK-HT------IEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD 183
Query: 150 QRAEKCQGLLRVQGR------PAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203
C GL G P D L+ + + I+++D G ++
Sbjct: 184 SAT--C-GLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDP---PSGSLK-HTLE 236
Query: 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 263
G + + FS +G+L+ + + I + D+ G+ T +K S + L FSP+
Sbjct: 237 GHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHT--LKGHS-DMVLSVVFSPDS 293
Query: 264 MFVISGSGDGSVYAWSVRSG 283
+ SGSGD ++ W +G
Sbjct: 294 QLLESGSGDNTIKLWDPATG 313
Score = 123 (48.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 58/252 (23%), Positives = 105/252 (41%)
Query: 69 LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLS 128
L+T+ ++ V F S ++ S N D +++L + +GH V S++
Sbjct: 34 LQTLEGHSDWIETVTF-SPDGRLLASGSN--DTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 129 LCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFD 188
+ SGS D T+ LW+ ++ + + +G + D+ V +VAF ++++
Sbjct: 91 FSPNGQLLASGSSDTTIKLWNSASDSLKHTM--EG-----HSDR--VESVAFSPNGQLWN 141
Query: 189 ARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP 248
G ++ G V FS DG+L+ + E I + DS L T
Sbjct: 142 PAI---GSLK-HTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 249 VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMF 308
N L FSP+G + SGS D ++ W SG + + + ++P +
Sbjct: 198 ---NWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLL 254
Query: 309 VTGSSE--LSFW 318
+GSS+ + W
Sbjct: 255 ASGSSDATIKLW 266
Score = 97 (39.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 30/123 (24%), Positives = 56/123 (45%)
Query: 201 SVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA-SF 259
++GG + + FS DGRL+ + + I + D G+L T ++ +E+ +F
Sbjct: 192 TLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLE----GHSNKIESLAF 247
Query: 260 SPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSF 317
SP G + SGS D ++ W +G + + ++P S + +GS + +
Sbjct: 248 SPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKL 307
Query: 318 WIP 320
W P
Sbjct: 308 WDP 310
Score = 83 (34.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 26/111 (23%), Positives = 51/111 (45%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
I ++ F L + S+D +I+L+D + +T+ V V F+ P + +S
Sbjct: 44 IETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFS--PNGQLLASG 101
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF--ISGSLDRTV 145
+ D +++L + + +GH DRV S++ + + GSL T+
Sbjct: 102 SS-DTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTI 151
>TAIR|locus:2043333 [details] [associations]
symbol:SWA1 "AT2G47990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0006364 "rRNA processing" evidence=IEA;IMP]
[GO:0009553 "embryo sac development" evidence=IMP] [GO:0009561
"megagametogenesis" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0000741 "karyogamy" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC005309 GO:GO:0009561
EMBL:AC006072 GO:GO:0006364 HSSP:P16649 GO:GO:0080008
HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK UniGene:At.436
UniGene:At.71162 IPI:IPI00525548 PIR:A84922 RefSeq:NP_182320.1
ProteinModelPortal:O82266 SMR:O82266 STRING:O82266 PaxDb:O82266
PRIDE:O82266 DNASU:819411 EnsemblPlants:AT2G47990.1 GeneID:819411
KEGG:ath:AT2G47990 TAIR:At2g47990 InParanoid:O82266
PhylomeDB:O82266 ProtClustDB:CLSN2683735 Genevestigator:O82266
Uniprot:O82266
Length = 530
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 63/274 (22%), Positives = 113/274 (41%)
Query: 12 VSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESI-RLYDVTAATCLK 70
VSL S+ + S SFRD +SS+ F +S L A D + +++D+ L+
Sbjct: 76 VSLFSSQSLSSSRR--FSFRDV---VSSVCF-RSDGALFAACDLSGVVQVFDIKERMALR 129
Query: 71 TINSKKYGVDLVCFTSHPTT-VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSL 129
T+ S F +P ++ G D ++ + + GH D V
Sbjct: 130 TLRSHSAPAR---FVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKD-YVRCGD 185
Query: 130 CS--SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-GRPA--AAYDDQGLVFAVAFGGYI 184
CS + ++GS D TV +WD R + + G P Y G + A A G +
Sbjct: 186 CSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVYLPSGGLIATAGGNSV 245
Query: 185 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244
+++D K + S ++ V + + ++ ++G++ V D R + TY
Sbjct: 246 KVWDLIGGGKMVCSMESHNKTVTSLRVARMESAESRLVSVALDGYMKVFDYGRAKV--TY 303
Query: 245 NVK-PVSRNSTLEASFSPEGMFVISGSGDGSVYA 277
+++ P + SP+G + G +G V+A
Sbjct: 304 SMRFPAP---LMSLGLSPDGSTRVIGGSNGMVFA 334
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 137 (53.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 77/310 (24%), Positives = 121/310 (39%)
Query: 42 FHKSSSYLVTASDDESIRLYDVTAATCLKTINSK---KYGVDL----VCFTSHPTTVIYS 94
F + YL T + S +++DVT + + + K G DL VCF+ Y
Sbjct: 277 FSRDGKYLATGCN-RSAQIFDVTLGQNVAVLQDESVDKSG-DLYIRSVCFSPDGK---YL 331
Query: 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154
+ D+ +R+ + F GH + SL + SGS D+TV LWD K
Sbjct: 332 ATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGK 391
Query: 155 CQGLLRVQ-GRPAAAYDDQGL-VFAVAFGGYIRMFDA------RKYEK--GPFD-IFSVG 203
L ++ G A GL V A + +R++D + E G D ++SV
Sbjct: 392 LVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVA 451
Query: 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 263
+ +V S D + L + +G + ++ L +P+G
Sbjct: 452 FAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGG--KCHRTFEGHKDFVLSVCLTPDG 509
Query: 264 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL--MFVTGSSELSFWIPD 321
+V+SGS D V W +G A M + VI P +F TGS ++ I
Sbjct: 510 HWVMSGSKDRGVQFWDPITGN--AQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARI-- 565
Query: 322 LSKLGAYVGR 331
+ AY GR
Sbjct: 566 -WRYSAYTGR 574
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT 89
F + I S+DF + Y+ + S D+++RL+D+ + T++ + GV V + P
Sbjct: 354 FSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIED-GVTTVAMS--PD 410
Query: 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFK---GHHDRVVSLSLCSSKDCFISGSLDRTVL 146
+Y + D+++R+ + + GH D V S++ + +SGSLD+T+
Sbjct: 411 G-LYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIK 469
Query: 147 LWD 149
LW+
Sbjct: 470 LWE 472
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 132 (51.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 47/166 (28%), Positives = 73/166 (43%)
Query: 117 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC-QGLLRVQGR-PAAAYDDQGL 174
F GH V+SLSL F+SG+ D ++ LWD R C Q + + A A+ G
Sbjct: 136 FAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGY 195
Query: 175 VFAVAFG-GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVL 233
F R+FD R ++ ++S I V FS GRL+L + + ++
Sbjct: 196 AFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIW 253
Query: 234 DSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWS 279
D+ +G +R S L + +GM V +GS D + W+
Sbjct: 254 DAMKGDRAGVLAGHD-NRVSCL--GVTDDGMAVATGSWDSFLKIWN 296
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 69/301 (22%), Positives = 128/301 (42%)
Query: 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL--------KTINSKKYG-VDLVC 83
YN + + + + T S D +IRL+D + CL K I S + + LV
Sbjct: 186 YNW-VLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVK 244
Query: 84 FTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR 143
S P + SSK+G ++++ ++ +Y H VS + SGS DR
Sbjct: 245 PGSKPR-LASSSKDG---TIKIWDTV-SRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDR 299
Query: 144 TVLLWDQRAE-KCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFD-ARKYEKGPFDIFS 201
TV +WD ++ +C +L+ + A+ L + + I FD K P +
Sbjct: 300 TVRVWDINSQGRCINILK-----SHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQK 354
Query: 202 VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL--EASF 259
+ + + K + + M++T + + L + L ST + ++ + L +F
Sbjct: 355 KALENYE-KICKKNGNSEEMMVTASDDYTMFLWN---PLKSTKPIARMTGHQKLVNHVAF 410
Query: 260 SPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSF 317
SP+G +++S S D S+ W R GK ++++ + W+ + V+ S + L
Sbjct: 411 SPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKV 470
Query: 318 W 318
W
Sbjct: 471 W 471
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 116 (45.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 45 SSSYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFTSHP---TTVIYSS---- 95
+S ++V++S D+S+ ++D+T + + +YGV T H V+ SS
Sbjct: 30 NSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTGHSHFVQDVVLSSDGQF 89
Query: 96 --KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE 153
WD LRL L R F GH V+S++ +S S DRT+ LW+ E
Sbjct: 90 ALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIVSASRDRTIKLWNTLGE 149
Query: 154 KCQ 156
C+
Sbjct: 150 -CK 151
Score = 57 (25.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 260 SPEGMFVISGSGDGSVYAWSVRSGKEVAS 288
SP+G SG DG W + GK + S
Sbjct: 218 SPDGSLCASGGKDGVTLLWDLAEGKRLYS 246
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 127 (49.8 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 36/132 (27%), Positives = 60/132 (45%)
Query: 37 ISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS 95
+SS+ K+S L+ T DD + L+ + C+ ++ V+ V + ++ S
Sbjct: 27 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 86
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
++G S+R+ L K LR GH + SL + SGS D + LWD R + C
Sbjct: 87 QSG---SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC 143
Query: 156 QGLLRVQGRPAA 167
+ R +G A
Sbjct: 144 --VFRYRGHSQA 153
Score = 108 (43.1 bits), Expect = 0.00090, P = 0.00090
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87
MS + + S+ + +V S SIR++D+ AA L+T+ K + + F H
Sbjct: 61 MSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF--H 118
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
P +S D +++L + + ++GH V L S + D TV L
Sbjct: 119 PYGEFVAS-GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 177
Query: 148 WDQRAEK 154
WD A K
Sbjct: 178 WDLTAGK 184
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 132 (51.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 54/214 (25%), Positives = 97/214 (45%)
Query: 118 KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAY------DD 171
+GH VVS+ + S + S SLD + LWD + K Q + + P A+ D
Sbjct: 61 EGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGK-Q-IRAIDAGPVDAWSVAFSPDS 118
Query: 172 QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIH 231
Q L + G + +F +K + + + G I + +S DG+ + ++G I+
Sbjct: 119 QHLATG-SHVGKVNIFGVETGKK-EYSLDTRGKFILS---IAYSPDGKYLASGAIDGIIN 173
Query: 232 VLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW 289
+ D G LL T + P+ R+ T FSP+ +++ S DG + + V+ A+
Sbjct: 174 IFDIATGKLLHTLEGHAMPI-RSLT----FSPDSQLLVTASDDGYIKIYEVQHASLAATL 228
Query: 290 MSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 323
+ + ++P FV+ SS+ S + D+S
Sbjct: 229 SGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVS 262
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 127 (49.8 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 36/132 (27%), Positives = 60/132 (45%)
Query: 37 ISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS 95
+SS+ K+S L+ T DD + L+ + C+ ++ V+ V + ++ S
Sbjct: 23 VSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGS 82
Query: 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155
++G S+R+ L K LR GH + SL + SGS D + LWD R + C
Sbjct: 83 QSG---SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC 139
Query: 156 QGLLRVQGRPAA 167
+ R +G A
Sbjct: 140 --VFRYRGHSQA 149
Score = 108 (43.1 bits), Expect = 0.00093, P = 0.00093
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87
MS + + S+ + +V S SIR++D+ AA L+T+ K + + F H
Sbjct: 57 MSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF--H 114
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
P +S D +++L + + ++GH V L S + D TV L
Sbjct: 115 PYGEFVAS-GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Query: 148 WDQRAEK 154
WD A K
Sbjct: 174 WDLTAGK 180
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 135 (52.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 58/231 (25%), Positives = 95/231 (41%)
Query: 99 WDESLRLLSL--HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW--DQRAEK 154
WD L L SL H Y RY GH D V SL + S S DRTV LW D++ +
Sbjct: 38 WDTFLMLWSLKPHARAY-RYV-GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKS 95
Query: 155 CQGLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANV 211
+ + P + D D L+ + I+++ + F ++S+
Sbjct: 96 SE--FKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQR---F-LYSLYRHTHWVRC 149
Query: 212 VKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 271
KFS DGRL++ + + I + D+ ++ ++ N F+P G + S
Sbjct: 150 AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFV---DFNPNGTCIASAGS 206
Query: 272 DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322
D +V W +R K + + + + P VT SS+ + + DL
Sbjct: 207 DHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDL 257
Score = 128 (50.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 53/248 (21%), Positives = 103/248 (41%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
++S+ F + L +AS D ++RL+ + + V V F++ ++ +S+
Sbjct: 63 VTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASE 122
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
D+S+++ S+ ++L H V +S S D+T+ +WD ++C
Sbjct: 123 ---DKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV 179
Query: 157 GLLR--VQGRPAAAYDDQGLVFAVAFGGY-IRMFDARKYEK-GPFDIFSVGGDISDANVV 212
V ++ G A A + ++++D R + + + S G N +
Sbjct: 180 NNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCG-----VNCL 234
Query: 213 KFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY--NVKPVSRNSTLEASFSPEGMFVISGS 270
F G ++ + +G + +LD G L+ T + PV SFS +G + SG
Sbjct: 235 SFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPV-----FTVSFSKDGELLTSGG 289
Query: 271 GDGSVYAW 278
D V W
Sbjct: 290 ADAQVLIW 297
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 59/260 (22%), Positives = 104/260 (40%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSKKYGVDLVCFTSH 87
SF+ + I+S DF + + TAS D + L+ + A + + K L F+
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQ-FSPQ 71
Query: 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147
+ +S+ D ++RL L FK H V S+ + ++ S D+++ +
Sbjct: 72 GNLLASASR---DRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKV 128
Query: 148 WDQ-RAEKCQGLLR-VQGRPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGG 204
W R L R A + G L+ + + I+++D K + FS
Sbjct: 129 WSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN--KQCVNNFS--D 184
Query: 205 DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 264
+ AN V F+ +G + + + + D LL Y V N SF P G
Sbjct: 185 SVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCL---SFHPLGN 241
Query: 265 FVISGSGDGSVYAWSVRSGK 284
+++ S DG+V + G+
Sbjct: 242 SLVTASSDGTVKMLDLIEGR 261
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 28/122 (22%), Positives = 62/122 (50%)
Query: 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP 88
+F D G + +DF+ + + + +A D +++++D+ L+ GV+ C + HP
Sbjct: 181 NFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVN--CLSFHP 238
Query: 89 --TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146
+++ +S +G ++++L L + + + +GH V ++S + SG D VL
Sbjct: 239 LGNSLVTASSDG---TVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVL 295
Query: 147 LW 148
+W
Sbjct: 296 IW 297
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 136 (52.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 72/309 (23%), Positives = 130/309 (42%)
Query: 29 SFRDYNGRISSMD-FHKSSSYLVTASDDESIRLYDV-TAATCLKTINSKKYGVDLVCFTS 86
++R +N ++ + F KS+ ++ S D I+L++V ++T K V V F +
Sbjct: 270 TYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNN 329
Query: 87 HPTTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVVSLSLCSSKD-CFISGSLDRT 144
T + +S +D ++L + R+ GH + K+ F+ G ++
Sbjct: 330 EGTEFLSAS---FDRYVKLWDTETGQVKQRFHTGHVPYCLKYHPDDDKNHMFLVGMQNKK 386
Query: 145 VLLWDQRA-EKCQGLLR-VQGRPAAAYDDQGLVFA-VAFGGYIRMF------DARKYEK- 194
++ WD R+ E Q R +Q + + D+ FA + +R++ D + +
Sbjct: 387 IIQWDSRSGEIVQEYDRHLQAVNSITFFDKNRRFASTSDDKSVRIWEWEIPVDTKLIQNV 446
Query: 195 GPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD--SFRGTLLSTYNVKPVSRN 252
G I ++ +D VV D R++L ++ + +FRG +N + N
Sbjct: 447 GLHAIPTMTKSPNDKWVVGQCMDNRIVLFQLVDDKLRFSKKKAFRG-----HNAAGYACN 501
Query: 253 STLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPG--SLMFVT 310
FSP+ F+ISG DG ++ W R+ K V W + D+ W P S M
Sbjct: 502 ----IDFSPDQSFLISGDADGKLFIWDWRTHKIVGKWKAHDSTCIAALWHPHEKSRMITA 557
Query: 311 GSSEL-SFW 318
G L W
Sbjct: 558 GWDGLIKMW 566
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 126 (49.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 55/201 (27%), Positives = 81/201 (40%)
Query: 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96
+S + + S L T SDD++IRL+D A + ++ D +H T I S
Sbjct: 225 VSCLAWSPDSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTRI-SGA 283
Query: 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156
+G + R GHH+ V L+ + SGS D V LWD RA +
Sbjct: 284 SGIGVGGGGGPARGTR--RPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLM 341
Query: 157 GLLRVQGRPAAAYD---DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVK 213
L P + D D LV + + G IR++D G V D V
Sbjct: 342 RSLPAHSDPVSGIDFCRDGTLVVSCSTDGLIRIWDTAT---GQCLRTLVHEDNPAVTNVC 398
Query: 214 FSNDGRLMLLTTMEGHIHVLD 234
FS +GR +L ++ I + D
Sbjct: 399 FSPNGRYILAFNLDSCIRLWD 419
Score = 53 (23.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 265 FVISGSGDGSVYAWSVRSGKEV 286
FV S S DG + W V+S KEV
Sbjct: 488 FVASASEDGHIVLWDVKS-KEV 508
WARNING: HSPs involving 308 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 332 332 0.00090 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 558
No. of states in DFA: 619 (66 KB)
Total size of DFA: 238 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.36u 0.08s 28.44t Elapsed: 00:00:02
Total cpu time: 28.43u 0.08s 28.51t Elapsed: 00:00:02
Start: Mon May 20 22:39:37 2013 End: Mon May 20 22:39:39 2013
WARNINGS ISSUED: 2