Query 020021
Match_columns 332
No_of_seqs 159 out of 1824
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 10:35:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020021.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020021hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 2.7E-46 9.1E-51 331.6 40.8 289 24-321 3-301 (304)
2 1vyh_C Platelet-activating fac 100.0 7.7E-47 2.6E-51 348.9 37.9 284 27-320 101-409 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 2.4E-45 8.1E-50 330.5 41.0 287 24-319 45-340 (340)
4 3iz6_a 40S ribosomal protein R 100.0 7.2E-46 2.5E-50 339.0 35.8 293 24-322 56-375 (380)
5 3ow8_A WD repeat-containing pr 100.0 3.8E-45 1.3E-49 326.8 39.5 287 24-320 22-319 (321)
6 2pbi_B Guanine nucleotide-bind 100.0 5.9E-45 2E-49 329.9 40.6 288 24-319 54-354 (354)
7 4ery_A WD repeat-containing pr 100.0 1.4E-43 4.9E-48 314.4 42.0 296 20-321 9-311 (312)
8 3frx_A Guanine nucleotide-bind 100.0 1.4E-43 4.6E-48 316.4 39.3 286 24-322 7-317 (319)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.6E-43 2.3E-47 315.3 38.2 299 22-327 3-341 (345)
10 1nr0_A Actin interacting prote 100.0 4E-43 1.4E-47 340.0 38.0 302 14-322 172-567 (611)
11 4gqb_B Methylosome protein 50; 100.0 2.1E-43 7.1E-48 318.6 32.8 285 31-326 27-335 (344)
12 2xzm_R RACK1; ribosome, transl 100.0 1.4E-42 4.7E-47 312.8 37.4 287 22-321 9-339 (343)
13 4g56_B MGC81050 protein; prote 100.0 1.5E-43 5.1E-48 321.1 29.4 281 30-320 38-341 (357)
14 1erj_A Transcriptional repress 100.0 5.4E-42 1.9E-46 314.7 39.5 281 32-321 62-388 (393)
15 2hes_X YDR267CP; beta-propelle 100.0 3.3E-41 1.1E-45 302.3 36.9 290 22-321 2-327 (330)
16 4aow_A Guanine nucleotide-bind 100.0 2.4E-40 8.4E-45 295.7 40.9 290 21-322 25-337 (340)
17 1nr0_A Actin interacting prote 100.0 6.5E-41 2.2E-45 324.5 39.1 298 12-322 129-522 (611)
18 2ymu_A WD-40 repeat protein; u 100.0 6.4E-40 2.2E-44 314.2 40.5 281 23-319 292-577 (577)
19 3dm0_A Maltose-binding peripla 100.0 5.8E-40 2E-44 322.2 39.8 287 22-320 370-691 (694)
20 3zwl_B Eukaryotic translation 100.0 1.5E-39 5E-44 293.2 37.1 294 19-323 17-347 (369)
21 3ow8_A WD repeat-containing pr 100.0 2.3E-39 7.9E-44 289.3 36.7 258 14-281 60-320 (321)
22 1vyh_C Platelet-activating fac 100.0 6.6E-40 2.2E-44 302.5 33.5 255 14-280 132-409 (410)
23 2pm7_B Protein transport prote 100.0 1.2E-39 4E-44 287.9 32.0 250 27-323 2-286 (297)
24 1sq9_A Antiviral protein SKI8; 100.0 7.8E-40 2.7E-44 299.0 31.7 290 24-322 6-395 (397)
25 2ymu_A WD-40 repeat protein; u 100.0 1.4E-38 4.7E-43 304.9 41.2 299 14-331 245-548 (577)
26 3ei3_B DNA damage-binding prot 100.0 9.7E-39 3.3E-43 291.1 37.0 292 22-321 61-381 (383)
27 3odt_A Protein DOA1; ubiquitin 100.0 5.2E-38 1.8E-42 277.2 37.0 284 22-325 6-299 (313)
28 1r5m_A SIR4-interacting protei 100.0 8.2E-39 2.8E-43 293.7 32.4 281 31-323 42-362 (425)
29 4gqb_B Methylosome protein 50; 100.0 2.7E-38 9.3E-43 285.1 33.6 245 28-284 76-333 (344)
30 1got_B GT-beta; complex (GTP-b 100.0 7.9E-38 2.7E-42 281.4 35.6 255 14-279 79-340 (340)
31 3mmy_A MRNA export factor; mRN 100.0 1.7E-38 5.9E-43 286.0 31.1 290 18-314 23-336 (368)
32 3i2n_A WD repeat-containing pr 100.0 1.2E-38 4E-43 286.5 28.3 287 27-321 11-352 (357)
33 2pm9_A Protein WEB1, protein t 100.0 4.9E-39 1.7E-43 295.3 26.1 282 32-322 65-414 (416)
34 3bg1_A Protein SEC13 homolog; 100.0 4.4E-39 1.5E-43 286.8 24.6 249 28-322 7-293 (316)
35 1gxr_A ESG1, transducin-like e 100.0 4.6E-37 1.6E-41 273.7 37.3 277 30-320 47-335 (337)
36 4e54_B DNA damage-binding prot 100.0 3.2E-38 1.1E-42 293.3 29.6 299 22-325 107-433 (435)
37 3mkq_A Coatomer beta'-subunit; 100.0 7.9E-37 2.7E-41 304.1 41.2 288 24-320 3-300 (814)
38 4h5i_A Guanine nucleotide-exch 100.0 4.5E-37 1.5E-41 279.3 35.9 284 34-321 14-342 (365)
39 3dw8_B Serine/threonine-protei 100.0 2.9E-37 9.9E-42 286.3 33.5 284 32-320 26-444 (447)
40 3k26_A Polycomb protein EED; W 100.0 3.3E-37 1.1E-41 277.7 32.8 284 29-320 13-364 (366)
41 3vl1_A 26S proteasome regulato 100.0 3E-37 1E-41 284.1 33.1 283 29-321 93-418 (420)
42 1pgu_A Actin interacting prote 100.0 7.4E-37 2.5E-41 294.3 37.0 300 12-322 142-614 (615)
43 3frx_A Guanine nucleotide-bind 100.0 9.5E-37 3.2E-41 272.0 34.8 249 25-283 56-318 (319)
44 1k8k_C P40, ARP2/3 complex 41 100.0 4.2E-37 1.4E-41 278.1 32.4 286 29-321 3-360 (372)
45 3sfz_A APAF-1, apoptotic pepti 100.0 4.7E-36 1.6E-40 311.5 44.4 295 26-326 607-1038(1249)
46 2ynn_A Coatomer subunit beta'; 100.0 1.4E-36 4.9E-41 269.0 34.7 250 67-324 4-261 (304)
47 1yfq_A Cell cycle arrest prote 100.0 1.5E-37 5E-42 278.1 28.6 280 27-316 4-315 (342)
48 3gre_A Serine/threonine-protei 100.0 3.8E-37 1.3E-41 285.4 31.6 289 23-319 51-437 (437)
49 2pbi_B Guanine nucleotide-bind 100.0 1.3E-36 4.5E-41 275.1 34.2 256 14-279 88-354 (354)
50 3v7d_B Cell division control p 100.0 3.7E-36 1.3E-40 280.9 38.3 283 26-324 113-423 (464)
51 4g56_B MGC81050 protein; prote 100.0 3.5E-37 1.2E-41 279.2 29.4 252 24-287 84-348 (357)
52 1r5m_A SIR4-interacting protei 100.0 2.1E-36 7.1E-41 277.7 33.2 277 32-321 106-424 (425)
53 2hes_X YDR267CP; beta-propelle 100.0 3.8E-36 1.3E-40 269.4 34.0 254 25-282 47-328 (330)
54 4gga_A P55CDC, cell division c 100.0 8.7E-36 3E-40 275.5 35.8 274 36-320 107-393 (420)
55 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-36 5E-41 270.6 29.5 262 28-323 5-338 (351)
56 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.3E-35 4.6E-40 267.4 36.1 255 30-287 57-340 (345)
57 3dwl_C Actin-related protein 2 100.0 5.7E-38 2E-42 285.1 19.8 247 27-281 4-280 (377)
58 3vl1_A 26S proteasome regulato 100.0 1.3E-36 4.4E-41 279.9 27.9 277 37-322 59-365 (420)
59 4ggc_A P55CDC, cell division c 100.0 5.6E-35 1.9E-39 258.5 36.1 273 37-320 28-313 (318)
60 1erj_A Transcriptional repress 100.0 3.3E-35 1.1E-39 269.4 35.6 241 35-282 124-389 (393)
61 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.2E-35 2.1E-39 271.5 37.4 282 23-322 148-442 (445)
62 3jrp_A Fusion protein of prote 100.0 6.7E-36 2.3E-40 270.4 30.0 255 25-282 2-287 (379)
63 2pm9_A Protein WEB1, protein t 100.0 8.7E-37 3E-41 280.3 24.2 279 34-322 12-337 (416)
64 3iz6_a 40S ribosomal protein R 100.0 4.7E-36 1.6E-40 273.9 28.5 266 13-285 89-378 (380)
65 2xzm_R RACK1; ribosome, transl 100.0 4.5E-35 1.5E-39 263.6 34.3 249 25-283 67-341 (343)
66 4a11_B DNA excision repair pro 100.0 2.2E-35 7.7E-40 269.6 32.7 297 24-324 33-367 (408)
67 4ery_A WD repeat-containing pr 100.0 1.3E-34 4.4E-39 256.7 36.5 256 14-281 47-311 (312)
68 4aez_A CDC20, WD repeat-contai 100.0 6.7E-35 2.3E-39 267.9 35.2 278 30-322 87-380 (401)
69 1pgu_A Actin interacting prote 100.0 1.4E-34 4.8E-39 278.4 37.9 305 25-331 54-583 (615)
70 2j04_B YDR362CP, TAU91; beta p 100.0 1.2E-36 4E-41 288.5 22.8 284 28-323 201-518 (524)
71 2oaj_A Protein SNI1; WD40 repe 100.0 4.1E-35 1.4E-39 294.9 35.2 296 14-320 81-659 (902)
72 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-35 4.2E-40 308.4 30.8 282 31-322 837-1207(1249)
73 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.2E-34 2.1E-38 264.8 37.9 276 24-322 108-391 (445)
74 2aq5_A Coronin-1A; WD40 repeat 100.0 4.3E-35 1.5E-39 269.1 29.2 254 25-325 72-345 (402)
75 1p22_A F-BOX/WD-repeat protein 100.0 2E-34 6.8E-39 267.5 33.5 269 31-322 130-414 (435)
76 3v7d_B Cell division control p 100.0 9.3E-34 3.2E-38 264.6 37.8 289 14-322 144-463 (464)
77 1gxr_A ESG1, transducin-like e 100.0 3.8E-34 1.3E-38 254.8 32.2 279 33-324 8-298 (337)
78 3vu4_A KMHSV2; beta-propeller 100.0 8E-34 2.8E-38 256.9 32.8 284 27-322 12-336 (355)
79 4gga_A P55CDC, cell division c 100.0 3.2E-33 1.1E-37 258.3 34.6 271 13-296 126-409 (420)
80 3k26_A Polycomb protein EED; W 100.0 2.5E-34 8.5E-39 258.9 25.8 245 33-282 68-366 (366)
81 2j04_B YDR362CP, TAU91; beta p 100.0 2.3E-35 8E-40 279.6 20.0 290 28-331 128-482 (524)
82 3jro_A Fusion protein of prote 100.0 2.1E-34 7E-39 285.2 27.2 248 27-321 2-284 (753)
83 4aez_A CDC20, WD repeat-contai 100.0 1.1E-32 3.7E-37 253.2 36.2 255 25-290 124-388 (401)
84 3dm0_A Maltose-binding peripla 100.0 6.3E-33 2.2E-37 272.2 34.8 247 26-281 422-692 (694)
85 4h5i_A Guanine nucleotide-exch 100.0 8.2E-34 2.8E-38 257.8 25.4 248 28-282 67-343 (365)
86 3mkq_A Coatomer beta'-subunit; 100.0 1.4E-32 4.9E-37 273.4 36.6 295 14-321 37-385 (814)
87 2oaj_A Protein SNI1; WD40 repe 100.0 2.1E-32 7.2E-37 275.2 37.5 203 30-242 13-247 (902)
88 4ggc_A P55CDC, cell division c 100.0 2.5E-32 8.5E-37 241.4 32.7 255 14-283 47-316 (318)
89 1sq9_A Antiviral protein SKI8; 100.0 4.4E-33 1.5E-37 254.2 28.5 253 24-284 52-397 (397)
90 4gq1_A NUP37; propeller, trans 100.0 2.8E-34 9.7E-39 263.4 19.8 269 30-319 85-386 (393)
91 3i2n_A WD repeat-containing pr 100.0 7.1E-33 2.4E-37 248.7 27.7 249 31-285 62-356 (357)
92 3ei3_B DNA damage-binding prot 100.0 4.8E-32 1.6E-36 246.8 31.7 243 30-282 114-382 (383)
93 4aow_A Guanine nucleotide-bind 100.0 2.2E-31 7.4E-36 237.6 35.2 251 25-284 77-339 (340)
94 2pm7_B Protein transport prote 100.0 1.2E-32 4.1E-37 242.9 26.5 226 14-282 33-285 (297)
95 2j04_A TAU60, YPL007P, hypothe 100.0 7E-33 2.4E-37 259.0 25.7 263 31-321 12-296 (588)
96 3zwl_B Eukaryotic translation 100.0 2.2E-31 7.5E-36 239.6 34.7 261 14-285 56-349 (369)
97 2xyi_A Probable histone-bindin 100.0 1.2E-32 4E-37 255.4 26.9 252 28-325 122-413 (430)
98 3gre_A Serine/threonine-protei 100.0 2.4E-33 8.2E-38 259.8 22.1 288 13-322 12-359 (437)
99 3odt_A Protein DOA1; ubiquitin 100.0 1.2E-31 4E-36 236.4 31.7 255 14-288 41-302 (313)
100 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.5E-31 5E-36 249.4 33.8 279 35-322 5-391 (450)
101 3lrv_A PRE-mRNA-splicing facto 100.0 7E-33 2.4E-37 249.2 21.4 258 41-314 43-323 (343)
102 3bws_A Protein LP49; two-domai 100.0 6.6E-31 2.3E-35 242.8 33.7 284 24-321 113-431 (433)
103 3jrp_A Fusion protein of prote 100.0 3.7E-31 1.3E-35 239.2 31.0 251 66-321 1-286 (379)
104 3dwl_C Actin-related protein 2 100.0 1.1E-32 3.7E-37 250.2 20.7 241 73-321 8-280 (377)
105 1k8k_C P40, ARP2/3 complex 41 100.0 3.9E-31 1.3E-35 238.8 30.8 245 72-322 4-274 (372)
106 4e54_B DNA damage-binding prot 100.0 2.3E-32 7.7E-37 253.8 22.4 264 14-285 144-433 (435)
107 1p22_A F-BOX/WD-repeat protein 100.0 2.1E-31 7.1E-36 247.2 28.7 259 22-302 161-433 (435)
108 2w18_A PALB2, fancn, partner a 100.0 2.4E-30 8.4E-35 228.2 30.6 266 13-320 13-355 (356)
109 3bg1_A Protein SEC13 homolog; 100.0 7.1E-32 2.4E-36 240.1 21.1 222 14-281 37-292 (316)
110 2aq5_A Coronin-1A; WD40 repeat 100.0 4.7E-31 1.6E-35 242.1 27.0 243 36-324 36-301 (402)
111 3dw8_B Serine/threonine-protei 100.0 3.6E-30 1.2E-34 238.5 31.3 248 24-280 71-444 (447)
112 4a11_B DNA excision repair pro 100.0 6.4E-30 2.2E-34 233.3 31.4 279 31-319 96-402 (408)
113 1l0q_A Surface layer protein; 100.0 1.1E-28 3.8E-33 224.9 38.8 264 14-293 14-286 (391)
114 2j04_A TAU60, YPL007P, hypothe 100.0 1.4E-30 4.9E-35 243.4 23.4 264 25-313 43-350 (588)
115 1l0q_A Surface layer protein; 100.0 2.3E-28 7.9E-33 222.8 37.1 262 47-322 3-275 (391)
116 3f3f_A Nucleoporin SEH1; struc 100.0 2.9E-29 9.9E-34 223.3 27.2 255 25-289 48-344 (351)
117 3vu4_A KMHSV2; beta-propeller 100.0 1.5E-28 5.1E-33 222.2 29.2 244 60-322 3-271 (355)
118 2w18_A PALB2, fancn, partner a 100.0 3.9E-29 1.3E-33 220.5 24.3 199 36-280 113-355 (356)
119 3mmy_A MRNA export factor; mRN 100.0 1.1E-28 3.9E-33 221.8 26.8 257 14-281 66-345 (368)
120 1yfq_A Cell cycle arrest prote 100.0 6.8E-29 2.3E-33 221.8 25.0 248 72-331 7-292 (342)
121 3jro_A Fusion protein of prote 100.0 8E-29 2.7E-33 245.2 25.0 227 14-282 33-285 (753)
122 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2E-27 7E-32 221.3 28.9 245 29-282 97-391 (450)
123 4gq1_A NUP37; propeller, trans 100.0 3.5E-28 1.2E-32 222.8 20.5 223 26-280 128-387 (393)
124 3bws_A Protein LP49; two-domai 100.0 2E-26 6.9E-31 212.7 32.0 242 29-282 164-432 (433)
125 2hqs_A Protein TOLB; TOLB, PAL 100.0 6.8E-27 2.3E-31 215.9 28.6 285 34-330 62-395 (415)
126 2xyi_A Probable histone-bindin 100.0 3.9E-27 1.3E-31 218.3 26.4 211 24-283 171-411 (430)
127 3lrv_A PRE-mRNA-splicing facto 100.0 1.9E-27 6.4E-32 213.7 21.0 224 85-322 45-292 (343)
128 1nir_A Nitrite reductase; hemo 100.0 4E-25 1.4E-29 210.6 36.7 274 42-324 145-460 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.5E-26 1.2E-30 211.1 27.1 282 11-305 92-409 (415)
130 1nir_A Nitrite reductase; hemo 100.0 4E-25 1.4E-29 210.6 34.4 293 23-325 168-517 (543)
131 3u4y_A Uncharacterized protein 99.9 1.1E-24 3.9E-29 193.8 33.1 280 41-329 4-311 (331)
132 2ecf_A Dipeptidyl peptidase IV 99.9 8.9E-25 3.1E-29 215.4 28.0 279 34-322 36-413 (741)
133 3vgz_A Uncharacterized protein 99.9 6.5E-23 2.2E-27 183.6 33.5 268 33-311 39-331 (353)
134 2ojh_A Uncharacterized protein 99.9 1E-23 3.5E-28 183.3 25.4 254 50-314 16-292 (297)
135 1k32_A Tricorn protease; prote 99.9 8.8E-23 3E-27 208.8 32.1 293 27-328 45-467 (1045)
136 1ri6_A Putative isomerase YBHE 99.9 3E-22 1E-26 178.2 31.4 269 47-321 6-307 (343)
137 2ecf_A Dipeptidyl peptidase IV 99.9 2.4E-23 8.4E-28 205.2 26.5 274 36-322 110-459 (741)
138 1pby_B Quinohemoprotein amine 99.9 2E-22 6.9E-27 178.9 29.5 263 47-322 2-310 (337)
139 1ri6_A Putative isomerase YBHE 99.9 8.3E-22 2.8E-26 175.4 32.5 266 31-306 34-335 (343)
140 3hfq_A Uncharacterized protein 99.9 1.8E-21 6.3E-26 174.5 34.4 271 54-327 14-324 (347)
141 2z3z_A Dipeptidyl aminopeptida 99.9 2.1E-22 7.3E-27 197.5 30.0 277 34-324 81-437 (706)
142 3o4h_A Acylamino-acid-releasin 99.9 6.1E-23 2.1E-27 197.2 25.3 269 34-322 21-313 (582)
143 3u4y_A Uncharacterized protein 99.9 1.1E-20 3.6E-25 168.1 37.1 277 23-305 29-326 (331)
144 1xfd_A DIP, dipeptidyl aminope 99.9 1.4E-23 4.7E-28 206.3 20.1 279 36-323 18-394 (723)
145 1pby_B Quinohemoprotein amine 99.9 8.6E-22 2.9E-26 174.9 27.7 257 24-292 21-320 (337)
146 1k32_A Tricorn protease; prote 99.9 2E-22 6.7E-27 206.2 26.3 270 27-314 196-492 (1045)
147 2z3z_A Dipeptidyl aminopeptida 99.9 1.2E-22 4.1E-27 199.3 23.5 283 24-322 17-389 (706)
148 1xfd_A DIP, dipeptidyl aminope 99.9 3.2E-22 1.1E-26 196.6 25.6 286 13-311 38-427 (723)
149 3hfq_A Uncharacterized protein 99.9 6E-21 2.1E-25 171.1 29.9 250 30-286 35-323 (347)
150 3scy_A Hypothetical bacterial 99.9 2.5E-20 8.6E-25 168.1 30.2 249 33-322 48-337 (361)
151 1jmx_B Amine dehydrogenase; ox 99.9 1.6E-20 5.3E-25 167.7 27.7 242 39-292 4-335 (349)
152 2oit_A Nucleoporin 214KDA; NH2 99.9 1.7E-21 5.8E-26 180.7 21.8 206 33-283 35-279 (434)
153 3pe7_A Oligogalacturonate lyas 99.9 1.3E-20 4.6E-25 171.1 24.0 291 24-323 20-383 (388)
154 2ojh_A Uncharacterized protein 99.9 1.8E-20 6.1E-25 162.7 23.5 238 28-273 35-293 (297)
155 1jof_A Carboxy-CIS,CIS-muconat 99.9 9.3E-20 3.2E-24 165.0 27.2 254 33-326 38-345 (365)
156 3vgz_A Uncharacterized protein 99.9 7.6E-19 2.6E-23 157.1 31.4 239 77-322 41-303 (353)
157 2oiz_A Aromatic amine dehydrog 99.9 1E-18 3.4E-23 158.2 31.6 273 23-306 40-360 (361)
158 1z68_A Fibroblast activation p 99.8 4.6E-20 1.6E-24 181.3 18.5 277 39-322 20-391 (719)
159 1jmx_B Amine dehydrogenase; ox 99.8 6.9E-18 2.3E-22 150.5 28.1 228 83-322 6-325 (349)
160 4a5s_A Dipeptidyl peptidase 4 99.8 2.4E-19 8.2E-24 177.0 19.0 276 36-326 18-357 (740)
161 3c5m_A Oligogalacturonate lyas 99.8 1.1E-18 3.9E-23 158.4 21.4 280 27-321 23-381 (396)
162 1z68_A Fibroblast activation p 99.8 1.2E-18 4E-23 171.2 22.9 284 26-321 48-442 (719)
163 3o4h_A Acylamino-acid-releasin 99.8 1.9E-19 6.4E-24 172.8 16.7 229 76-320 21-274 (582)
164 3fvz_A Peptidyl-glycine alpha- 99.8 1.5E-17 5.2E-22 148.3 28.0 250 35-322 24-322 (329)
165 3azo_A Aminopeptidase; POP fam 99.8 1.2E-17 4E-22 162.6 26.4 288 29-321 18-366 (662)
166 2oit_A Nucleoporin 214KDA; NH2 99.8 2.3E-18 8E-23 159.5 20.4 200 32-235 90-331 (434)
167 1q7f_A NHL, brain tumor CG1071 99.8 2.8E-16 9.6E-21 136.8 31.8 242 32-322 27-280 (286)
168 2oiz_A Aromatic amine dehydrog 99.8 5.8E-17 2E-21 146.6 27.5 273 44-323 13-335 (361)
169 3scy_A Hypothetical bacterial 99.8 1.9E-16 6.5E-21 142.6 30.1 235 24-302 89-360 (361)
170 3pe7_A Oligogalacturonate lyas 99.8 1E-17 3.6E-22 151.9 21.1 262 59-328 13-335 (388)
171 2gop_A Trilobed protease; beta 99.8 4E-16 1.4E-20 139.4 28.4 263 36-328 16-336 (347)
172 2dg1_A DRP35, lactonase; beta 99.8 3.1E-16 1.1E-20 139.4 27.2 267 34-312 5-299 (333)
173 3e5z_A Putative gluconolactona 99.8 2.2E-15 7.6E-20 131.9 31.4 247 24-327 17-291 (296)
174 3dsm_A Uncharacterized protein 99.7 2.3E-15 8E-20 134.1 28.2 259 54-327 15-307 (328)
175 2bkl_A Prolyl endopeptidase; m 99.7 3.8E-16 1.3E-20 153.1 23.2 249 32-285 118-400 (695)
176 2xdw_A Prolyl endopeptidase; a 99.7 3.7E-15 1.3E-19 146.4 29.5 249 32-284 122-416 (710)
177 2z2n_A Virginiamycin B lyase; 99.7 3.5E-13 1.2E-17 117.2 38.0 277 30-323 10-296 (299)
178 3c5m_A Oligogalacturonate lyas 99.7 5.3E-16 1.8E-20 140.7 19.0 259 60-328 14-335 (396)
179 4a5s_A Dipeptidyl peptidase 4 99.7 2.8E-15 9.6E-20 147.9 24.1 274 26-311 48-433 (740)
180 3no2_A Uncharacterized protein 99.7 2.5E-14 8.6E-19 124.3 27.3 218 45-311 4-230 (276)
181 1jof_A Carboxy-CIS,CIS-muconat 99.7 1E-14 3.4E-19 131.8 24.8 211 37-283 85-342 (365)
182 1rwi_B Serine/threonine-protei 99.7 8.1E-14 2.8E-18 119.8 27.3 240 36-325 25-267 (270)
183 2dg1_A DRP35, lactonase; beta 99.7 9.6E-13 3.3E-17 116.8 34.5 245 26-273 36-301 (333)
184 3sjl_D Methylamine dehydrogena 99.7 2.7E-13 9.4E-18 122.2 29.4 271 23-304 68-384 (386)
185 2gop_A Trilobed protease; beta 99.6 1.8E-13 6.1E-18 122.1 27.5 238 35-296 59-343 (347)
186 3azo_A Aminopeptidase; POP fam 99.6 4.4E-14 1.5E-18 137.3 25.4 252 27-319 117-408 (662)
187 2mad_H Methylamine dehydrogena 99.6 5.4E-12 1.9E-16 114.3 36.8 258 24-294 57-362 (373)
188 1qks_A Cytochrome CD1 nitrite 99.6 1.8E-12 6.1E-17 123.5 34.7 271 43-322 164-477 (567)
189 1q7f_A NHL, brain tumor CG1071 99.6 3.1E-13 1.1E-17 117.4 26.7 201 33-283 75-281 (286)
190 3fvz_A Peptidyl-glycine alpha- 99.6 1.4E-13 4.7E-18 122.6 24.2 207 32-282 88-322 (329)
191 2qc5_A Streptogramin B lactona 99.6 2.3E-11 7.9E-16 105.6 37.9 275 31-320 16-298 (300)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2E-12 6.7E-17 113.5 30.6 244 34-326 17-303 (314)
193 2mad_H Methylamine dehydrogena 99.6 6.3E-12 2.1E-16 113.9 34.7 276 42-324 28-352 (373)
194 1qks_A Cytochrome CD1 nitrite 99.6 5.2E-12 1.8E-16 120.3 34.6 293 24-325 187-541 (567)
195 2xdw_A Prolyl endopeptidase; a 99.6 7.9E-13 2.7E-17 129.8 28.5 272 44-322 81-414 (710)
196 1yr2_A Prolyl oligopeptidase; 99.6 2.7E-13 9.4E-18 133.7 25.1 245 33-284 161-443 (741)
197 3dsm_A Uncharacterized protein 99.6 4.4E-12 1.5E-16 112.8 29.6 243 35-290 44-309 (328)
198 3e5z_A Putative gluconolactona 99.6 2.4E-12 8.3E-17 112.4 27.1 213 68-328 19-252 (296)
199 3hrp_A Uncharacterized protein 99.6 1.2E-11 4E-16 113.5 30.2 241 35-318 131-404 (409)
200 3g4e_A Regucalcin; six bladed 99.5 4.8E-11 1.7E-15 104.4 30.1 234 28-311 6-260 (297)
201 3c75_H MADH, methylamine dehyd 99.5 6.5E-12 2.2E-16 115.1 25.0 271 22-304 107-423 (426)
202 3sjl_D Methylamine dehydrogena 99.5 1.6E-11 5.3E-16 110.7 26.3 277 41-322 39-363 (386)
203 2bkl_A Prolyl endopeptidase; m 99.5 5.6E-12 1.9E-16 123.4 25.1 274 43-326 76-401 (695)
204 3iuj_A Prolyl endopeptidase; h 99.4 2.1E-11 7.3E-16 119.3 24.7 245 32-285 126-408 (693)
205 3no2_A Uncharacterized protein 99.4 2.9E-11 9.9E-16 104.9 22.5 175 99-321 13-194 (276)
206 3c75_H MADH, methylamine dehyd 99.4 7E-11 2.4E-15 108.2 24.9 277 44-324 82-404 (426)
207 1mda_H Methylamine dehydrogena 99.4 5E-11 1.7E-15 107.3 23.5 245 48-303 34-366 (368)
208 2z2n_A Virginiamycin B lyase; 99.4 2E-09 6.9E-14 93.2 32.7 236 32-284 54-297 (299)
209 1rwi_B Serine/threonine-protei 99.4 2.6E-11 8.9E-16 104.0 20.1 200 35-285 67-267 (270)
210 2qe8_A Uncharacterized protein 99.4 2E-11 6.7E-16 109.3 19.6 266 22-312 7-309 (343)
211 3dr2_A Exported gluconolactona 99.4 7.7E-10 2.6E-14 97.1 28.9 230 27-313 37-297 (305)
212 1yr2_A Prolyl oligopeptidase; 99.4 1.3E-10 4.3E-15 114.7 25.9 259 43-309 115-422 (741)
213 2ghs_A AGR_C_1268P; regucalcin 99.4 2.3E-09 7.7E-14 95.1 30.9 225 35-311 49-290 (326)
214 1xip_A Nucleoporin NUP159; bet 99.4 5.3E-11 1.8E-15 107.6 19.5 175 36-269 39-231 (388)
215 2hz6_A Endoplasmic reticulum t 99.3 1.6E-12 5.4E-17 117.7 5.8 206 45-307 8-217 (369)
216 2qc5_A Streptogramin B lactona 99.3 2.9E-08 1E-12 85.8 32.3 233 32-280 59-298 (300)
217 1xip_A Nucleoporin NUP159; bet 99.3 1.4E-10 4.9E-15 104.8 15.7 170 123-310 39-230 (388)
218 3g4e_A Regucalcin; six bladed 99.3 8E-09 2.7E-13 90.2 26.6 196 33-271 52-261 (297)
219 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 7.2E-09 2.5E-13 90.5 24.8 205 33-282 69-299 (314)
220 1yiq_A Quinohemoprotein alcoho 99.2 6.5E-09 2.2E-13 101.5 25.7 260 46-310 121-534 (689)
221 2qe8_A Uncharacterized protein 99.2 2.8E-09 9.7E-14 95.2 19.9 230 32-278 64-317 (343)
222 1kb0_A Quinohemoprotein alcoho 99.2 1.5E-08 5.1E-13 98.7 25.8 258 46-310 128-536 (677)
223 3dr2_A Exported gluconolactona 99.1 6.8E-09 2.3E-13 91.0 20.8 203 114-328 37-273 (305)
224 3hrp_A Uncharacterized protein 99.1 6.2E-07 2.1E-11 82.0 33.7 202 121-328 130-360 (409)
225 2iwa_A Glutamine cyclotransfer 99.1 1.7E-08 5.9E-13 86.2 21.3 215 23-283 8-238 (266)
226 1kb0_A Quinohemoprotein alcoho 99.1 2.4E-08 8.3E-13 97.3 25.0 267 46-321 77-506 (677)
227 3q7m_A Lipoprotein YFGL, BAMB; 99.1 1.3E-07 4.6E-12 85.0 27.7 260 46-322 53-337 (376)
228 3iuj_A Prolyl endopeptidase; h 99.1 1.7E-08 5.8E-13 98.7 23.2 219 77-309 129-386 (693)
229 2ece_A 462AA long hypothetical 99.1 2.8E-07 9.5E-12 84.0 29.2 222 86-312 93-399 (462)
230 3nol_A Glutamine cyclotransfer 99.1 4E-08 1.4E-12 83.2 21.9 203 22-271 29-244 (262)
231 3q7m_A Lipoprotein YFGL, BAMB; 99.1 3.8E-07 1.3E-11 82.0 30.1 228 45-291 102-346 (376)
232 2ece_A 462AA long hypothetical 99.0 4.4E-07 1.5E-11 82.7 27.9 223 44-270 93-399 (462)
233 3nok_A Glutaminyl cyclase; bet 99.0 4.3E-08 1.5E-12 83.1 19.5 205 18-270 37-253 (268)
234 1mda_H Methylamine dehydrogena 99.0 1.5E-08 5.1E-13 91.2 17.8 213 102-323 47-347 (368)
235 1yiq_A Quinohemoprotein alcoho 99.0 1.6E-07 5.5E-12 91.7 25.8 268 46-321 70-504 (689)
236 2ghs_A AGR_C_1268P; regucalcin 99.0 1.1E-07 3.7E-12 84.2 22.6 194 123-327 50-265 (326)
237 3hxj_A Pyrrolo-quinoline quino 99.0 9.6E-08 3.3E-12 83.9 21.7 259 34-318 59-319 (330)
238 1fwx_A Nitrous oxide reductase 99.0 2.9E-07 1E-11 86.6 25.7 233 87-328 100-437 (595)
239 1npe_A Nidogen, entactin; glyc 99.0 7.1E-06 2.4E-10 70.0 32.2 247 48-306 3-263 (267)
240 3mbr_X Glutamine cyclotransfer 98.9 6.2E-07 2.1E-11 75.3 23.1 203 22-271 7-223 (243)
241 1fwx_A Nitrous oxide reductase 98.9 2.6E-07 9E-12 86.9 22.4 245 38-284 90-433 (595)
242 3hxj_A Pyrrolo-quinoline quino 98.9 1.1E-07 3.8E-12 83.6 18.7 258 39-322 24-284 (330)
243 2iwa_A Glutamine cyclotransfer 98.8 4.3E-07 1.5E-11 77.6 19.5 191 123-321 22-234 (266)
244 2fp8_A Strictosidine synthase; 98.8 1.5E-05 5E-10 70.1 30.1 237 36-282 20-313 (322)
245 3nol_A Glutamine cyclotransfer 98.8 5.6E-07 1.9E-11 76.2 19.0 182 122-313 43-245 (262)
246 4a2l_A BT_4663, two-component 98.8 3.2E-05 1.1E-09 76.7 34.6 277 37-325 175-483 (795)
247 3nok_A Glutaminyl cyclase; bet 98.7 1.3E-06 4.6E-11 73.9 19.1 181 122-313 55-255 (268)
248 1kv9_A Type II quinohemoprotei 98.7 6.3E-06 2.1E-10 80.1 26.2 259 46-309 117-516 (668)
249 4a2l_A BT_4663, two-component 98.7 0.00014 4.7E-09 72.1 35.2 272 34-322 356-659 (795)
250 2p4o_A Hypothetical protein; p 98.7 0.00011 3.7E-09 64.0 30.3 239 24-273 22-279 (306)
251 1k3i_A Galactose oxidase precu 98.7 6.1E-06 2.1E-10 80.1 23.7 270 39-313 190-530 (656)
252 3mbr_X Glutamine cyclotransfer 98.7 6.8E-06 2.3E-10 68.9 20.6 182 122-313 21-224 (243)
253 1kv9_A Type II quinohemoprotei 98.6 5.4E-06 1.8E-10 80.6 22.9 191 46-244 66-340 (668)
254 2hz6_A Endoplasmic reticulum t 98.6 1.2E-08 4E-13 92.2 3.0 227 36-281 39-278 (369)
255 1npe_A Nidogen, entactin; glyc 98.6 0.00013 4.4E-09 62.1 28.4 220 35-264 36-263 (267)
256 3v9f_A Two-component system se 98.6 0.0002 7E-09 70.7 32.4 278 34-326 312-615 (781)
257 1flg_A Protein (quinoprotein e 98.5 0.00027 9.4E-09 67.4 31.3 259 46-310 117-545 (582)
258 1w6s_A Methanol dehydrogenase 98.5 0.00016 5.4E-09 69.2 29.3 253 49-309 124-531 (599)
259 2ad6_A Methanol dehydrogenase 98.5 7.3E-05 2.5E-09 71.2 26.8 258 46-311 115-524 (571)
260 2ad6_A Methanol dehydrogenase 98.5 0.00016 5.5E-09 68.8 28.1 193 46-246 62-344 (571)
261 3v9f_A Two-component system se 98.5 0.00054 1.8E-08 67.7 32.7 279 35-325 211-527 (781)
262 2p4o_A Hypothetical protein; p 98.4 0.00058 2E-08 59.3 27.9 219 78-311 33-276 (306)
263 1w6s_A Methanol dehydrogenase 98.4 0.00077 2.6E-08 64.4 30.7 194 46-245 62-350 (599)
264 2fp8_A Strictosidine synthase; 98.4 4.5E-05 1.5E-09 66.9 20.7 195 123-326 20-273 (322)
265 3qqz_A Putative uncharacterize 98.2 0.0015 5.2E-08 55.2 27.5 214 28-280 20-251 (255)
266 3v65_B Low-density lipoprotein 98.2 0.0029 9.9E-08 57.0 28.8 250 38-300 80-336 (386)
267 1flg_A Protein (quinoprotein e 98.2 0.0044 1.5E-07 59.0 30.1 110 46-160 68-201 (582)
268 4hw6_A Hypothetical protein, I 98.2 0.0031 1.1E-07 57.8 27.9 239 37-281 141-432 (433)
269 3tc9_A Hypothetical hydrolase; 98.2 0.0023 8E-08 58.5 26.5 241 37-281 139-429 (430)
270 2xe4_A Oligopeptidase B; hydro 98.1 0.00012 4.2E-09 72.0 18.7 119 32-153 170-305 (751)
271 3v64_C Agrin; beta propeller, 98.1 0.0044 1.5E-07 55.0 30.8 243 35-290 34-283 (349)
272 1k3i_A Galactose oxidase precu 98.0 0.00029 9.8E-09 68.3 17.9 240 81-323 190-498 (656)
273 3tc9_A Hypothetical hydrolase; 98.0 0.0093 3.2E-07 54.5 26.8 227 79-314 139-420 (430)
274 3m0c_C LDL receptor, low-densi 97.9 0.016 5.4E-07 57.2 29.3 211 32-289 421-639 (791)
275 1ijq_A LDL receptor, low-densi 97.9 0.01 3.5E-07 51.7 31.4 226 56-290 10-246 (316)
276 4hw6_A Hypothetical protein, I 97.9 0.014 4.9E-07 53.3 26.4 228 79-314 141-423 (433)
277 3ei3_A DNA damage-binding prot 97.8 0.039 1.3E-06 56.8 30.3 278 33-324 552-915 (1158)
278 2xe4_A Oligopeptidase B; hydro 97.8 0.0017 5.9E-08 63.9 19.3 156 123-282 175-354 (751)
279 1n7d_A LDL receptor, low-densi 97.8 0.00066 2.2E-08 66.2 16.0 238 54-300 384-632 (699)
280 3p5b_L Low density lipoprotein 97.7 0.028 9.6E-07 50.7 31.2 228 54-290 90-328 (400)
281 3amr_A 3-phytase; beta-propell 97.7 0.027 9.1E-07 49.7 24.3 197 45-246 39-273 (355)
282 3v65_B Low-density lipoprotein 97.6 0.035 1.2E-06 49.9 26.5 204 35-245 116-326 (386)
283 3sov_A LRP-6, low-density lipo 97.6 0.032 1.1E-06 48.7 27.6 225 55-289 12-245 (318)
284 3v64_C Agrin; beta propeller, 97.4 0.054 1.9E-06 47.8 28.4 204 35-245 73-283 (349)
285 1ijq_A LDL receptor, low-densi 97.4 0.058 2E-06 46.9 28.7 205 35-244 30-245 (316)
286 3qqz_A Putative uncharacterize 97.4 0.049 1.7E-06 45.8 24.8 197 116-314 21-244 (255)
287 3sre_A PON1, serum paraoxonase 97.4 0.037 1.3E-06 49.1 20.2 187 126-321 54-297 (355)
288 2p9w_A MAL S 1 allergenic prot 97.3 0.031 1.1E-06 48.8 18.7 155 125-283 16-216 (334)
289 3kya_A Putative phosphatase; s 97.3 0.11 3.7E-06 48.2 25.8 248 37-287 141-480 (496)
290 4a0p_A LRP6, LRP-6, low-densit 97.2 0.17 5.7E-06 48.6 27.3 203 35-288 37-243 (628)
291 3p5b_L Low density lipoprotein 97.1 0.14 4.9E-06 46.1 29.2 209 32-245 109-328 (400)
292 3s94_A LRP-6, low-density lipo 97.0 0.28 9.7E-06 46.9 28.5 224 55-288 17-249 (619)
293 1n7d_A LDL receptor, low-densi 96.9 0.0065 2.2E-07 59.2 11.7 205 36-245 407-622 (699)
294 2xbg_A YCF48-like protein; pho 96.9 0.19 6.3E-06 43.8 25.9 233 34-280 79-320 (327)
295 3sov_A LRP-6, low-density lipo 96.9 0.19 6.5E-06 43.7 28.2 197 100-304 12-219 (318)
296 2xbg_A YCF48-like protein; pho 96.9 0.2 6.8E-06 43.6 31.5 263 33-313 34-312 (327)
297 3s94_A LRP-6, low-density lipo 96.8 0.39 1.3E-05 45.9 30.3 267 35-311 127-453 (619)
298 3sre_A PON1, serum paraoxonase 96.8 0.27 9.1E-06 43.5 22.9 205 38-279 53-295 (355)
299 3pbp_A Nucleoporin NUP82; beta 96.7 0.31 1.1E-05 44.0 20.6 138 177-317 36-207 (452)
300 3kya_A Putative phosphatase; s 96.7 0.41 1.4E-05 44.3 27.8 236 80-320 142-473 (496)
301 3amr_A 3-phytase; beta-propell 96.6 0.35 1.2E-05 42.6 20.9 183 132-320 39-261 (355)
302 2ism_A Putative oxidoreductase 96.5 0.37 1.3E-05 42.4 28.1 225 36-270 32-333 (352)
303 2xzh_A Clathrin heavy chain 1; 96.5 0.39 1.3E-05 41.9 30.7 230 42-282 74-332 (365)
304 3a9g_A Putative uncharacterize 96.5 0.43 1.5E-05 42.1 28.0 233 36-270 30-330 (354)
305 2vpj_A Kelch-like protein 12; 96.3 0.41 1.4E-05 40.7 23.0 94 217-313 159-262 (301)
306 3m0c_C LDL receptor, low-densi 96.3 0.97 3.3E-05 44.5 28.2 180 54-282 402-589 (791)
307 1bpo_A Protein (clathrin); cla 96.1 0.77 2.6E-05 41.6 30.7 231 42-283 73-332 (494)
308 2ism_A Putative oxidoreductase 96.1 0.15 5.1E-06 45.0 14.3 102 208-312 32-153 (352)
309 2g8s_A Glucose/sorbosone dehyd 96.1 0.7 2.4E-05 40.7 24.5 231 36-269 19-340 (353)
310 3a9g_A Putative uncharacterize 95.7 0.23 7.9E-06 43.9 14.0 103 208-312 30-153 (354)
311 1cru_A Protein (soluble quinop 95.7 1.2 4.2E-05 40.6 19.0 32 122-153 27-58 (454)
312 3ii7_A Kelch-like protein 7; p 95.6 0.89 3.1E-05 38.7 22.7 80 228-312 169-255 (306)
313 2vpj_A Kelch-like protein 12; 95.6 0.88 3E-05 38.6 19.0 66 217-285 206-281 (301)
314 1xi4_A Clathrin heavy chain; a 95.5 0.77 2.6E-05 47.8 17.9 196 42-245 73-297 (1630)
315 2uvk_A YJHT; unknown function, 95.2 1.3 4.6E-05 38.5 17.2 142 143-288 168-348 (357)
316 2xn4_A Kelch-like protein 2; s 95.2 1.2 4.3E-05 37.7 23.0 229 46-285 16-279 (302)
317 1tl2_A L10, protein (tachylect 95.1 0.085 2.9E-06 43.2 8.0 104 208-315 42-156 (236)
318 3das_A Putative oxidoreductase 95.1 1.6 5.5E-05 38.3 21.4 38 117-154 27-64 (347)
319 2p9w_A MAL S 1 allergenic prot 95.0 1.6 5.6E-05 38.0 27.2 172 29-238 7-216 (334)
320 4a0p_A LRP6, LRP-6, low-densit 94.5 3.4 0.00012 39.4 32.5 270 35-312 123-451 (628)
321 3pbp_A Nucleoporin NUP82; beta 94.4 2.8 9.6E-05 37.8 18.8 113 166-278 70-208 (452)
322 1cru_A Protein (soluble quinop 94.3 0.83 2.8E-05 41.8 13.8 105 208-312 28-162 (454)
323 2xn4_A Kelch-like protein 2; s 94.3 2.2 7.4E-05 36.1 20.4 183 132-322 61-276 (302)
324 1zgk_A Kelch-like ECH-associat 93.9 2.7 9.2E-05 35.7 20.7 102 217-322 168-287 (308)
325 2zwa_A Leucine carboxyl methyl 93.8 5.1 0.00017 38.7 21.8 111 44-155 396-525 (695)
326 4asc_A Kelch repeat and BTB do 93.7 2.9 9.9E-05 35.6 22.7 67 216-285 147-224 (315)
327 2g8s_A Glucose/sorbosone dehyd 93.6 0.74 2.5E-05 40.5 11.6 103 208-312 19-148 (353)
328 1zgk_A Kelch-like ECH-associat 92.6 4.2 0.00015 34.5 16.0 66 217-285 215-290 (308)
329 2uvk_A YJHT; unknown function, 91.3 6.6 0.00023 33.9 19.9 110 216-328 199-348 (357)
330 2be1_A Serine/threonine-protei 90.9 1.3 4.4E-05 38.8 9.5 183 100-287 19-236 (339)
331 3ii7_A Kelch-like protein 7; p 89.8 8.2 0.00028 32.5 21.3 66 217-285 200-275 (306)
332 2be1_A Serine/threonine-protei 89.6 9.9 0.00034 33.1 19.0 112 47-161 11-139 (339)
333 2wg3_C Hedgehog-interacting pr 88.1 4.9 0.00017 36.7 11.5 102 209-312 16-157 (463)
334 1tl2_A L10, protein (tachylect 88.0 9.8 0.00034 31.1 13.9 174 45-231 3-204 (236)
335 3das_A Putative oxidoreductase 86.2 16 0.00056 31.8 28.9 240 29-269 26-325 (347)
336 4asc_A Kelch repeat and BTB do 85.3 16 0.00054 30.8 20.3 67 217-286 196-281 (315)
337 2woz_A Kelch repeat and BTB do 85.0 17 0.00057 30.8 22.3 229 48-287 18-292 (318)
338 3ei3_A DNA damage-binding prot 84.0 42 0.0014 34.6 33.0 249 56-320 492-763 (1158)
339 4gq2_M Nucleoporin NUP120; bet 83.5 1.8 6.3E-05 43.5 6.7 38 36-73 237-274 (950)
340 3sbq_A Nitrous-oxide reductase 82.8 4.8 0.00016 37.7 8.5 75 208-282 324-408 (638)
341 1bpo_A Protein (clathrin); cla 81.2 32 0.0011 31.3 26.5 95 100-201 47-143 (494)
342 3f7f_A Nucleoporin NUP120; nuc 81.1 3 0.0001 40.2 6.7 38 35-74 222-259 (729)
343 4gq2_M Nucleoporin NUP120; bet 79.1 8.3 0.00028 38.8 9.6 38 252-289 236-273 (950)
344 3ott_A Two-component system se 79.0 48 0.0016 32.0 30.6 270 35-321 146-447 (758)
345 4fhn_B Nucleoporin NUP120; pro 75.5 2.2 7.6E-05 43.9 4.4 37 37-73 240-276 (1139)
346 2woz_A Kelch repeat and BTB do 74.3 38 0.0013 28.4 22.5 177 102-285 25-234 (318)
347 3ott_A Two-component system se 73.5 67 0.0023 30.9 34.9 275 36-325 192-505 (758)
348 1xi4_A Clathrin heavy chain; a 73.2 99 0.0034 32.7 18.4 218 54-288 46-295 (1630)
349 4fhn_B Nucleoporin NUP120; pro 72.2 4.2 0.00014 41.8 5.4 38 252-289 238-275 (1139)
350 2wg3_C Hedgehog-interacting pr 70.4 60 0.0021 29.4 12.3 108 36-143 15-160 (463)
351 3q6k_A 43.2 kDa salivary prote 68.5 63 0.0021 28.5 22.4 82 35-117 87-197 (381)
352 2xzh_A Clathrin heavy chain 1; 68.0 61 0.0021 28.2 26.8 85 101-191 49-135 (365)
353 3sbq_A Nitrous-oxide reductase 63.3 19 0.00064 33.8 7.2 68 255-322 326-408 (638)
354 3zwu_A Alkaline phosphatase PH 61.2 33 0.0011 32.3 8.7 58 210-269 479-548 (592)
355 3f7f_A Nucleoporin NUP120; nuc 59.7 15 0.00052 35.4 6.2 36 124-161 224-259 (729)
356 3qhy_B Beta-lactamase inhibito 59.2 77 0.0026 26.4 17.7 221 36-282 25-246 (282)
357 4a9v_A PHOX; hydrolase, beta-p 58.4 51 0.0017 31.0 9.3 60 208-269 477-548 (592)
358 2zwa_A Leucine carboxyl methyl 57.5 1.4E+02 0.0046 28.7 19.6 151 131-284 396-579 (695)
359 4hvt_A Ritya.17583.B, post-pro 43.0 2.3E+02 0.008 27.2 24.8 240 37-281 131-429 (711)
360 3zwu_A Alkaline phosphatase PH 40.8 1E+02 0.0035 29.0 8.5 58 37-94 478-548 (592)
361 1b2p_A Protein (lectin); manno 38.9 1E+02 0.0035 21.8 7.1 45 265-310 63-108 (119)
362 4a9v_A PHOX; hydrolase, beta-p 35.1 96 0.0033 29.1 7.2 57 253-309 477-546 (592)
363 3qhy_B Beta-lactamase inhibito 34.8 1.9E+02 0.0066 23.8 14.4 181 122-320 63-244 (282)
364 4h3o_A Lectin; cadmium, plant 29.4 1.4E+02 0.0047 20.5 6.5 41 269-310 57-98 (105)
365 3mez_B Mannose-specific lectin 24.9 1.8E+02 0.0061 20.2 7.6 12 299-310 61-72 (113)
366 1olz_A Semaphorin 4D; developm 24.3 3.5E+02 0.012 25.7 9.3 58 219-277 416-477 (663)
367 3izo_F Fiber; pentameric pento 22.5 3.4E+02 0.012 25.3 8.4 104 39-154 380-484 (581)
368 3a0c_A Mannose/sialic acid-bin 21.7 2E+02 0.0069 19.8 7.6 44 266-310 54-98 (110)
369 3al9_A Plexin-A2; beta-propell 21.2 2.6E+02 0.0088 25.9 7.5 62 219-282 414-480 (539)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.7e-46 Score=331.59 Aligned_cols=289 Identities=18% Similarity=0.255 Sum_probs=247.7
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCcee
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v 103 (332)
++..++|++|.+.|.+++|+|++++|++|+.|++|+|||+.+++++..+..|..++..++|+++++.+++++. |++|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---d~~i 79 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD---DFRI 79 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET---TSEE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC---CCEE
Confidence 5677899999999999999999999999999999999999999999999999999999999999999998865 8899
Q ss_pred EEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCce-EEEEEEecC--ceeEEEcC-CC-eEEEE
Q 020021 104 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK-CQGLLRVQG--RPAAAYDD-QG-LVFAV 178 (332)
Q Consensus 104 ~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~-~~~~~~~~~--~~~~~~~~-~~-~~~~~ 178 (332)
++||+.+++.+..+.+|.+.|.+++|+|++++|+||+.|++|++||++++. +...+..+. .....+++ ++ .++++
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 999999999999999999999999999999999999999999999998763 333443332 34566776 44 46666
Q ss_pred EeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcC--CCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceE
Q 020021 179 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 256 (332)
Q Consensus 179 ~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~--dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
+.|+.|++||++.... .. ....++...+..+.++| ++.++++++.|++|++||+.+++++..+. .|...+..
T Consensus 160 s~D~~v~iwd~~~~~~-~~--~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~---~h~~~v~~ 233 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTP-NF--TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE---GHMSNVSF 233 (304)
T ss_dssp ETTSEEEEEETTCSSC-SE--EEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE---CCSSCEEE
T ss_pred eCCCeEEEEECCCCCc-cc--eeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC---CCCCCEEE
Confidence 7799999999976432 11 12234445678888876 78899999999999999999999888876 46678889
Q ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCee--EEEeccce-EEEeccc
Q 020021 257 ASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL--MFVTGSSE-LSFWIPD 321 (332)
Q Consensus 257 v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~--~l~t~~~d-~~~w~~~ 321 (332)
++|+|++++|++|+.||+|++||+.+++.+..+..|...+.+++|+|++. ++++|+.+ ..+|...
T Consensus 234 ~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~ 301 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEec
Confidence 99999999999999999999999999999999999999999999999874 57888776 6677654
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.7e-47 Score=348.93 Aligned_cols=284 Identities=18% Similarity=0.297 Sum_probs=251.9
Q ss_pred eeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEE
Q 020021 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (332)
Q Consensus 27 ~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~ 106 (332)
...|.+|.++|++++|+|++++|+||+.|++|+|||+.++++..++.+|...|..++|++++..+++++. |++|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~---D~~i~iw 177 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA---DMTIKLW 177 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET---TSCCCEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeC---CCeEEEE
Confidence 5678999999999999999999999999999999999999999999999999999999999998888764 8899999
Q ss_pred EccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCeE-EEEEeCCE
Q 020021 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLV-FAVAFGGY 183 (332)
Q Consensus 107 d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~ 183 (332)
|+.+++++..+.+|...|.+++|+|++++|+||+.|++|++||++++.+...+..+. .....+++++.+ ++++.|+.
T Consensus 178 d~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 178 DFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp ETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 999999999999999999999999999999999999999999999999887776543 234566676654 45556899
Q ss_pred EEEEECccCCCCCeeEEEecCCCCCceeEEEcCC--------------------CCEEEEEcCCCeEEEEEccCCeEeEE
Q 020021 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSND--------------------GRLMLLTTMEGHIHVLDSFRGTLLST 243 (332)
Q Consensus 184 i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d--------------------g~~l~~~~~dg~i~i~d~~~~~~~~~ 243 (332)
|++||++... ....+.+|...+.+++|+|+ |.++++++.|+.|++||+.++..+..
T Consensus 258 v~vwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 258 VRVWVVATKE----CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333 (410)
T ss_dssp EEEEETTTCC----EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEECCCCc----eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 9999997542 12344567778999999997 67899999999999999999998887
Q ss_pred eeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEecc
Q 020021 244 YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 320 (332)
Q Consensus 244 ~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~ 320 (332)
+. .|...+.+++|+|+|++|++|+.||+|++||+.+++++..+..|...|++++|+|++.+|++|+.| +++|+.
T Consensus 334 ~~---~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 334 LV---GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EE---CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EE---CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 76 466788999999999999999999999999999999999999999999999999999999999988 777753
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.4e-45 Score=330.53 Aligned_cols=287 Identities=18% Similarity=0.235 Sum_probs=248.2
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCcee
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v 103 (332)
++..++|++|.++|.+++|+|++++|+||+.|++|+|||+.+++++..+..|...|..++|+|++..+++++. |+.+
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---d~~v 121 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL---DNIC 121 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEET---TCEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeC---CCeE
Confidence 4567889999999999999999999999999999999999999999999999999999999999999988764 8899
Q ss_pred EEEEccCC----ceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCeE-E
Q 020021 104 RLLSLHDN----KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLV-F 176 (332)
Q Consensus 104 ~v~d~~~~----~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~-~ 176 (332)
++||+.++ .....+.+|.+.|.++.|++++ .+++++.|++|++||++++++...+..+. .....+++++.+ +
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE
Confidence 99999875 3566788999999999999876 48999999999999999998877765433 345667777654 4
Q ss_pred EEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceE
Q 020021 177 AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 256 (332)
Q Consensus 177 ~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
+++.|+.|++||++... ......+|...+.+++|+|+|+++++++.||+|++||+.+++.+..+... .+...+.+
T Consensus 201 sg~~d~~v~~wd~~~~~----~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-~~~~~v~~ 275 (340)
T 1got_B 201 SGACDASAKLWDVREGM----CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD-NIICGITS 275 (340)
T ss_dssp EEETTSCEEEEETTTCS----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-TCCSCEEE
T ss_pred EEeCCCcEEEEECCCCe----eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC-CcccceEE
Confidence 55568999999997642 23345567788999999999999999999999999999998877665422 23346788
Q ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEec
Q 020021 257 ASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWI 319 (332)
Q Consensus 257 v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~ 319 (332)
++|+|+|++|++|+.||.|++||+.+++.+..+..|...|.+++|+|++.+|++|+.| +++|+
T Consensus 276 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999999999999999999999999999999999999999988 77774
No 4
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.2e-46 Score=338.96 Aligned_cols=293 Identities=19% Similarity=0.322 Sum_probs=245.2
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCcee
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v 103 (332)
....++|.+|.++|++++|+|++++|+||+.|++|+|||+.+++++..+..|...|..++|+|++..+++++ .|+.+
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~---~d~~v 132 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGG---LDSAC 132 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECC---SSSCC
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEee---CCCcE
Confidence 445678999999999999999999999999999999999999999999999999999999999999988775 48999
Q ss_pred EEEEccCCc-------eEEEeecccccEEEEEecCC-CCeEEEeeCCCcEEEEeCCCceEEEEEEe-----c--CceeEE
Q 020021 104 RLLSLHDNK-------YLRYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRV-----Q--GRPAAA 168 (332)
Q Consensus 104 ~v~d~~~~~-------~~~~~~~h~~~V~~v~~~~~-~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-----~--~~~~~~ 168 (332)
++||+.+.. ....+.+|.+.|.++.|+|+ +..|+||+.|++|++||++++++...+.. + ......
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 999986532 34568899999999999996 45799999999999999999888766522 1 122334
Q ss_pred EcC-CC-eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeee
Q 020021 169 YDD-QG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV 246 (332)
Q Consensus 169 ~~~-~~-~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 246 (332)
+.+ ++ .+++++.|+.|++||++..... .....+|...|.+++|+|+|+++++++.||+|++||+.+++.+..+..
T Consensus 213 ~~~~~~~~l~sgs~D~~v~~wd~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 213 INSLNANMFISGSCDTTVRLWDLRITSRA---VRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp ECSSSCCEEEEEETTSCEEEEETTTTCCC---CEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred eecCCCCEEEEEECCCeEEEEECCCCCcc---eEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 433 34 5666677999999999753221 233456778899999999999999999999999999999998877654
Q ss_pred cCC----CCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe----cCCCCCCceEEeCCCeeEEEeccce--EE
Q 020021 247 KPV----SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW----MSFDTEPPVIKWTPGSLMFVTGSSE--LS 316 (332)
Q Consensus 247 ~~~----~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~----~~~~~~v~~l~~sp~~~~l~t~~~d--~~ 316 (332)
... +...+..++|+|+|++|++|+.||.|++||+.+++.+..+ ..|...|++++|+|++++|++|+.| ++
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 321 1234778999999999999999999999999998887776 6799999999999999999999988 88
Q ss_pred Eecccc
Q 020021 317 FWIPDL 322 (332)
Q Consensus 317 ~w~~~~ 322 (332)
+|+...
T Consensus 370 iW~~~~ 375 (380)
T 3iz6_a 370 IWAFSG 375 (380)
T ss_dssp EEECCS
T ss_pred EEecCC
Confidence 887654
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-45 Score=326.83 Aligned_cols=287 Identities=19% Similarity=0.259 Sum_probs=247.8
Q ss_pred ccceeEeccCCCcEEEEEECCC----CCEEEEEeCCCcEEEEEcCCCee--eEEeeecccceeEEEEccCCCEEEEecCC
Q 020021 24 MEVGMSFRDYNGRISSMDFHKS----SSYLVTASDDESIRLYDVTAATC--LKTINSKKYGVDLVCFTSHPTTVIYSSKN 97 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~d----g~~l~tgs~D~tv~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 97 (332)
..+.+.+.+|+++|.+++|+|+ +.+|+||+.|++|+|||+.+++. ...+.+|...|..+++++++..+++++.
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~- 100 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL- 100 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET-
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC-
Confidence 3445677899999999999975 57999999999999999987754 4567889999999999999998888764
Q ss_pred CCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCeE
Q 020021 98 GWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLV 175 (332)
Q Consensus 98 g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~ 175 (332)
|++|++||+.+++.+..+..|...+.+++|+|++++|++++.|++|++||+++++....+.... .....+++++.+
T Consensus 101 --D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 101 --DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp --TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE
T ss_pred --CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE
Confidence 8899999999999999999999999999999999999999999999999999888776665443 345677787765
Q ss_pred EEE-EeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcc
Q 020021 176 FAV-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNST 254 (332)
Q Consensus 176 ~~~-~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 254 (332)
+++ +.|+.|++||++..+ ....+.++...+.+++|+|+++++++++.|+.|++||+.+++.+..+. .|...+
T Consensus 179 lasg~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~---~h~~~v 251 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGK----LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS---GHASWV 251 (321)
T ss_dssp EEEEETTSCEEEEETTTTE----EEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC---CCSSCE
T ss_pred EEEEcCCCeEEEEECCCCc----EEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc---CCCCce
Confidence 554 468999999997532 234456677889999999999999999999999999999988877665 466789
Q ss_pred eEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEecc
Q 020021 255 LEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 320 (332)
Q Consensus 255 ~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~ 320 (332)
.+++|+|++++|++|+.|++|++||+.+++++..+..|...|.+++|+|++++|++++.| +++|+.
T Consensus 252 ~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 252 LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 999999999999999999999999999999999999999999999999999999999887 888874
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.9e-45 Score=329.93 Aligned_cols=288 Identities=16% Similarity=0.236 Sum_probs=247.0
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCcee
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v 103 (332)
++..++|++|.++|++++|+|++++|+||+.|++|+|||..+++..+.+..+...|..++|+|++..+++++ .|+.+
T Consensus 54 ~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~---~d~~i 130 (354)
T 2pbi_B 54 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGG---LDNKC 130 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEES---TTSEE
T ss_pred cEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEee---CCCCE
Confidence 456788999999999999999999999999999999999999999999988888899999999999998875 48999
Q ss_pred EEEEccCC------ceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCce--eEEEcC--C-
Q 020021 104 RLLSLHDN------KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDD--Q- 172 (332)
Q Consensus 104 ~v~d~~~~------~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~--~~~~~~--~- 172 (332)
++|++... .....+.+|.+.|.++.|+|++..|+|++.|++|++||++++++...+..+... ...+.+ +
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g 210 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 210 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSC
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCC
Confidence 99998643 245677899999999999999999999999999999999999988777655432 334443 3
Q ss_pred CeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCC
Q 020021 173 GLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252 (332)
Q Consensus 173 ~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 252 (332)
..+++++.|+.|++||++..+ ......+|...+++++|+|++.++++++.|++|++||++.++.+..+... .+..
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~~----~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~-~~~~ 285 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSGQ----CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKE-SIIF 285 (354)
T ss_dssp CEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-TCCS
T ss_pred CEEEEEeCCCeEEEEECCCCc----EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC-Cccc
Confidence 356667779999999998643 23344567788999999999999999999999999999988776655422 2234
Q ss_pred cceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEec
Q 020021 253 STLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWI 319 (332)
Q Consensus 253 ~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~ 319 (332)
.+..++|+|+|++|++|+.|++|++||+.+++.+..+..|...|++++|+||+++|++++.| +++|+
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 56789999999999999999999999999999999999999999999999999999999988 77774
No 7
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-43 Score=314.41 Aligned_cols=296 Identities=21% Similarity=0.431 Sum_probs=248.9
Q ss_pred HHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCC
Q 020021 20 ILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW 99 (332)
Q Consensus 20 ~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~ 99 (332)
+.....+..+|.+|.++|++++|+|++++|++|+.|++|++||+.+++....+..|...|..++|+|+++.+++++.
T Consensus 9 ~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--- 85 (312)
T 4ery_A 9 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD--- 85 (312)
T ss_dssp CCCCCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---
T ss_pred CCCCceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC---
Confidence 34556778889999999999999999999999999999999999999999999999999999999999999988864
Q ss_pred CceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCe-EE
Q 020021 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGL-VF 176 (332)
Q Consensus 100 d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~-~~ 176 (332)
|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++++...+..+. .....+++++. ++
T Consensus 86 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 86 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 165 (312)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEE
Confidence 8899999999999999999999999999999999999999999999999999988877665443 23456677665 45
Q ss_pred EEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceE
Q 020021 177 AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 256 (332)
Q Consensus 177 ~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
+++.|+.|++||++..+. .. .....+...+..++|+|+++++++++.|+.|++||+.+++.+..+..+......+..
T Consensus 166 ~~~~d~~i~~wd~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
T 4ery_A 166 SSSYDGLCRIWDTASGQC--LK-TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 242 (312)
T ss_dssp EEETTSCEEEEETTTCCE--EE-EECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCE
T ss_pred EEeCCCcEEEEECCCCce--ee-EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEE
Confidence 555689999999976431 11 112234456888999999999999999999999999999988777643222222233
Q ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEecc--ce--EEEeccc
Q 020021 257 ASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SE--LSFWIPD 321 (332)
Q Consensus 257 v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~--~d--~~~w~~~ 321 (332)
....+++++|++|+.||.|++||+.+++.+..+..|...|.+++|+|++.++++++ .| +++|..+
T Consensus 243 ~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 243 NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 33447899999999999999999999999999999999999999999999999885 34 8888754
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.4e-43 Score=316.36 Aligned_cols=286 Identities=16% Similarity=0.301 Sum_probs=236.8
Q ss_pred ccceeEeccCCCcEEEEEECCCC-CEEEEEeCCCcEEEEEcCC-----CeeeEEeeecccceeEEEEccCCCEEEEecCC
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTA-----ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN 97 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg-~~l~tgs~D~tv~iwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 97 (332)
+.+..+|.+|+++|.+++|+|++ ++|+||+.|++|++||+.. +.++..+.+|...|..++|++++..+++++.
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~- 85 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW- 85 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET-
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC-
Confidence 45667899999999999999965 8999999999999999863 3456788899999999999999999998864
Q ss_pred CCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCC---
Q 020021 98 GWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQ--- 172 (332)
Q Consensus 98 g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~--- 172 (332)
|++|++||+.+++.+..+.+|...|.+++|+|++++|+|++.|++|++||++.. +...+..+. .....+.+.
T Consensus 86 --D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 86 --DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp --TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECCC---
T ss_pred --CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEeccCCcEEEEEEccCCCC
Confidence 899999999999999999999999999999999999999999999999999754 333333222 223334332
Q ss_pred ---C-eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecC
Q 020021 173 ---G-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP 248 (332)
Q Consensus 173 ---~-~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 248 (332)
+ .+++++.|+.|++||++..+ ......+|...+.+++|+|+|+++++++.||.|++||+.+++.+..+..
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-- 236 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQ----IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-- 236 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTE----EEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC--
T ss_pred CCCccEEEEEeCCCEEEEEECCcch----hheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC--
Confidence 2 46667779999999997542 2334557778999999999999999999999999999999998877752
Q ss_pred CCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEec--------CCCCCCceEEeCCCeeEEEeccce--EEEe
Q 020021 249 VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM--------SFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318 (332)
Q Consensus 249 ~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~--------~~~~~v~~l~~sp~~~~l~t~~~d--~~~w 318 (332)
...+..++|+|++.+|++++.+ .+++|++..+..+..+. .|...+.+++|+|||++|++|+.| +++|
T Consensus 237 --~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vW 313 (319)
T 3frx_A 237 --QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVW 313 (319)
T ss_dssp --CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred --CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEE
Confidence 3578899999999999988755 59999998877666553 245567899999999999999988 8888
Q ss_pred cccc
Q 020021 319 IPDL 322 (332)
Q Consensus 319 ~~~~ 322 (332)
+...
T Consensus 314 d~~t 317 (319)
T 3frx_A 314 QVMT 317 (319)
T ss_dssp EEEE
T ss_pred EEee
Confidence 7643
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.6e-43 Score=315.27 Aligned_cols=299 Identities=11% Similarity=0.224 Sum_probs=235.4
Q ss_pred hcccceeEeccCCC-cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeE--E-eeecccceeEEEEccCCCEEEEecCC
Q 020021 22 QSMEVGMSFRDYNG-RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK--T-INSKKYGVDLVCFTSHPTTVIYSSKN 97 (332)
Q Consensus 22 ~~~~~~~~l~~h~~-~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~--~-~~~~~~~v~~~~~~~~~~~~~~~s~~ 97 (332)
.++++.++|.+|.+ .|.+++|+|+|++||||+.|++|+|||+.+++... . ..+|...|..++|+|++..+++++.
T Consensus 3 ~~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~- 81 (345)
T 3fm0_A 3 DSLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF- 81 (345)
T ss_dssp -CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET-
T ss_pred ccEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC-
Confidence 45678889999998 99999999999999999999999999998876442 2 2568888999999999999998864
Q ss_pred CCCceeEEEEccCCc--eEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceE---EEEEEec--CceeEEEc
Q 020021 98 GWDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC---QGLLRVQ--GRPAAAYD 170 (332)
Q Consensus 98 g~d~~v~v~d~~~~~--~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~---~~~~~~~--~~~~~~~~ 170 (332)
|+++++||+..+. ++..+.+|.+.|.+++|+|++++|+|++.|++|++||++.+.. ...+..+ ......++
T Consensus 82 --D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 82 --DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp --TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred --CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 8899999998764 5778999999999999999999999999999999999976543 3333222 23456677
Q ss_pred CCCe-EEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCe----------
Q 020021 171 DQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT---------- 239 (332)
Q Consensus 171 ~~~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~---------- 239 (332)
+++. +++++.|+.|++||.+... ......+.+|...|.+++|+|+|++|++++.|++|++||...+.
T Consensus 160 p~~~~l~s~s~d~~i~~w~~~~~~--~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~ 237 (345)
T 3fm0_A 160 PSQELLASASYDDTVKLYREEEDD--WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGS 237 (345)
T ss_dssp SSSSCEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC--
T ss_pred CCCCEEEEEeCCCcEEEEEecCCC--EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeecc
Confidence 7665 5555668999999986532 12234566788899999999999999999999999999964321
Q ss_pred -----EeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCce---------EEEecCCCCCCceEEeCCCe
Q 020021 240 -----LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE---------VASWMSFDTEPPVIKWTPGS 305 (332)
Q Consensus 240 -----~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~---------~~~~~~~~~~v~~l~~sp~~ 305 (332)
.+..+ ...|...+..++|+|++.+|++++.|++|++|+...+.. ......|...|++|+|+|++
T Consensus 238 ~~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 315 (345)
T 3fm0_A 238 DPSWKCICTL--SGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE 315 (345)
T ss_dssp -CEEEEEEEE--CSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS
T ss_pred CCccceeEEe--cCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCC
Confidence 11222 223667889999999999999999999999999865431 12235799999999999998
Q ss_pred -eEEEeccce--EEEecccc-ccccc
Q 020021 306 -LMFVTGSSE--LSFWIPDL-SKLGA 327 (332)
Q Consensus 306 -~~l~t~~~d--~~~w~~~~-~~~~~ 327 (332)
.+|++++.| +++|+... +++.+
T Consensus 316 ~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 316 PGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp TTEEEEEETTSCEEEEEECC------
T ss_pred ceEEEEcCCCCcEEEEEecCCCCccc
Confidence 599999887 88998643 34444
No 10
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4e-43 Score=339.96 Aligned_cols=302 Identities=16% Similarity=0.253 Sum_probs=242.6
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEee-------ecccceeEEEEcc
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-------SKKYGVDLVCFTS 86 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~ 86 (332)
+++|+ ....+..++|.+|.+.|.+++|+|+|++|+||+.|++|+|||+.+++++..+. +|...|..++|+|
T Consensus 172 v~lwd--~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp 249 (611)
T 1nr0_A 172 VAIFE--GPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP 249 (611)
T ss_dssp EEEEE--TTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT
T ss_pred EEEEE--CCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC
Confidence 45565 23456778899999999999999999999999999999999999999988884 6888999999999
Q ss_pred CCCEEEEecCCCCCceeEEEEccCCceEE-------------------------------------------Eeeccccc
Q 020021 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLR-------------------------------------------YFKGHHDR 123 (332)
Q Consensus 87 ~~~~~~~~s~~g~d~~v~v~d~~~~~~~~-------------------------------------------~~~~h~~~ 123 (332)
++..+++++. |++|++||+.+++.+. .+.+|...
T Consensus 250 dg~~l~s~s~---D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~ 326 (611)
T 1nr0_A 250 DGTKIASASA---DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKA 326 (611)
T ss_dssp TSSEEEEEET---TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCEEEEEeC---CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC
Confidence 9999988864 8899999998766543 44589999
Q ss_pred EEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEE-e--cCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCC----
Q 020021 124 VVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-V--QGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGP---- 196 (332)
Q Consensus 124 V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~---- 196 (332)
|++++|+|++++|+|++.|++|++||+.++.+...+. . .......+.+++.+++++.|+.+++|++.......
T Consensus 327 v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~ 406 (611)
T 1nr0_A 327 ITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV 406 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCC
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccccccee
Confidence 9999999999999999999999999999887655431 1 12234566677888888899999999975422100
Q ss_pred -------eeEEEe-------------------------cCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEe
Q 020021 197 -------FDIFSV-------------------------GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244 (332)
Q Consensus 197 -------~~~~~~-------------------------~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~ 244 (332)
...... ..+...+.+++|||||+++++++.|++|++||+..+......
T Consensus 407 ~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~ 486 (611)
T 1nr0_A 407 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVK 486 (611)
T ss_dssp EEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred eeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeee
Confidence 000000 012245678999999999999999999999999876543211
Q ss_pred eecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCC-CceEEE--ecCCCCCCceEEeCCCeeEEEeccce--EEEec
Q 020021 245 NVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS-GKEVAS--WMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWI 319 (332)
Q Consensus 245 ~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~-~~~~~~--~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~ 319 (332)
. ..|...+.+++|||||++|++++.|++|++||+.+ ++.+.. +..|...|.+++|+||+++|++++.| +++|+
T Consensus 487 ~--~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~ 564 (611)
T 1nr0_A 487 T--IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWN 564 (611)
T ss_dssp E--EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred c--cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEE
Confidence 1 24667899999999999999999999999999987 555443 34499999999999999999999988 88898
Q ss_pred ccc
Q 020021 320 PDL 322 (332)
Q Consensus 320 ~~~ 322 (332)
.+.
T Consensus 565 ~~~ 567 (611)
T 1nr0_A 565 MNK 567 (611)
T ss_dssp TTC
T ss_pred CCC
Confidence 754
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.1e-43 Score=318.62 Aligned_cols=285 Identities=15% Similarity=0.169 Sum_probs=219.7
Q ss_pred ccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCC-----------CeeeEEeeecccceeEEEEccCCCEEEEecCCCC
Q 020021 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-----------ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW 99 (332)
Q Consensus 31 ~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~ 99 (332)
..|...|.+++|+|||.+|++++ |+++|+||... .........+..+|..++|++++ .+++++.
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~--- 101 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASD--- 101 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEET---
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEEC---
Confidence 45788899999999999999888 77888887421 01111122345578999999985 5666654
Q ss_pred CceeEEEEccCCceEE----EeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCC
Q 020021 100 DESLRLLSLHDNKYLR----YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQG 173 (332)
Q Consensus 100 d~~v~v~d~~~~~~~~----~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~ 173 (332)
|++|++||+.+++.+. .+.+|.+.|++++|+|++++|+||+.|++|++||++++++...+..+. .....+.+++
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~ 181 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHK 181 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSC
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCC
Confidence 8899999999887544 345899999999999999999999999999999999999888776543 3345666654
Q ss_pred --eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCC-CCEEEEEcCCCeEEEEEccCCeEeEEeeecCCC
Q 020021 174 --LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250 (332)
Q Consensus 174 --~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d-g~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 250 (332)
.+++++.|++|++||++..+. ...+....+...+.+++|+|+ ++++++++.||.|++||+.+++.+.++. .|
T Consensus 182 ~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~---~h 256 (344)
T 4gqb_B 182 DSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA---VH 256 (344)
T ss_dssp TTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE---CC
T ss_pred CCceeeeccccccccccccccce--eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc---CC
Confidence 355667799999999986542 222222223345788999985 5788999999999999999999888776 46
Q ss_pred CCcceEEEECCCC-CEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCee-EEEeccce--EEEecccccccc
Q 020021 251 RNSTLEASFSPEG-MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGSSE--LSFWIPDLSKLG 326 (332)
Q Consensus 251 ~~~~~~v~~spdg-~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~t~~~d--~~~w~~~~~~~~ 326 (332)
...+.+++|+|++ ++||+||.|++|+|||+.+++.+ .+..|...|.+|+|+|++. +|++++.| +++|+.+.+.++
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~~ 335 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLP 335 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC----
T ss_pred CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCCC
Confidence 7889999999998 68999999999999999887754 5689999999999999985 67788877 888987766554
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.4e-42 Score=312.79 Aligned_cols=287 Identities=14% Similarity=0.229 Sum_probs=229.2
Q ss_pred hcccceeEeccCCCcEEEEEE-----CC-CCCEEEEEeCCCcEEEEEcCCC-------eeeEEeeecccceeEEEEccCC
Q 020021 22 QSMEVGMSFRDYNGRISSMDF-----HK-SSSYLVTASDDESIRLYDVTAA-------TCLKTINSKKYGVDLVCFTSHP 88 (332)
Q Consensus 22 ~~~~~~~~l~~h~~~I~~i~~-----s~-dg~~l~tgs~D~tv~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~ 88 (332)
..++...+|++|+++|++++| ++ ++++|+||+.|++|+|||+.+. .+...+.+|...|..++|++++
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN 88 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC
Confidence 345667789999999999999 76 8999999999999999999743 4567788999999999999999
Q ss_pred CEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEE--e--cCc
Q 020021 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--V--QGR 164 (332)
Q Consensus 89 ~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~--~--~~~ 164 (332)
..+++++. |++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.......... . ...
T Consensus 89 ~~l~s~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 89 CFAISSSW---DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWV 165 (343)
T ss_dssp TEEEEEET---TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCE
T ss_pred CEEEEEcC---CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCcee
Confidence 99888764 8999999999999999999999999999999999999999999999999987443222111 0 112
Q ss_pred eeEEEcCC-----------CeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEE
Q 020021 165 PAAAYDDQ-----------GLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVL 233 (332)
Q Consensus 165 ~~~~~~~~-----------~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~ 233 (332)
....+++. ..+++++.|+.|++||... .......+|...+.+++|+|+|+++++++.||.|++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iw 240 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-----QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIW 240 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-----EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred eeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-----ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEE
Confidence 34455554 3566677799999999432 1223445677889999999999999999999999999
Q ss_pred EccC-CeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEE--Eec-----------CCCCCCceE
Q 020021 234 DSFR-GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVA--SWM-----------SFDTEPPVI 299 (332)
Q Consensus 234 d~~~-~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~--~~~-----------~~~~~v~~l 299 (332)
|+.. ......+. +...+.+++|+|++++++++ .|+.|++||+.+++... .+. .|...+.++
T Consensus 241 d~~~~~~~~~~~~----~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 315 (343)
T 2xzm_R 241 DILNLTYPQREFD----AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSL 315 (343)
T ss_dssp ESSCCSSCSEEEE----CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEE
T ss_pred ECCCCcccceeec----CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEE
Confidence 9844 33333332 23458899999999988755 68889999998766533 333 577789999
Q ss_pred EeCCCeeEEEeccce--EEEeccc
Q 020021 300 KWTPGSLMFVTGSSE--LSFWIPD 321 (332)
Q Consensus 300 ~~sp~~~~l~t~~~d--~~~w~~~ 321 (332)
+|+|++++|++|+.| +++|+.+
T Consensus 316 ~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 316 AWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp EECSSSCCEEEEETTSEEEEEEEE
T ss_pred EECCCCCeEEEecCCceEEEEEEE
Confidence 999999999999887 7778754
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-43 Score=321.10 Aligned_cols=281 Identities=16% Similarity=0.166 Sum_probs=219.8
Q ss_pred eccCCCcEEEEEECCCCCEEEEEeC------CCcEEEEEcCCCeeeE----EeeecccceeEEEEccCCCEEEEecCCCC
Q 020021 30 FRDYNGRISSMDFHKSSSYLVTASD------DESIRLYDVTAATCLK----TINSKKYGVDLVCFTSHPTTVIYSSKNGW 99 (332)
Q Consensus 30 l~~h~~~I~~i~~s~dg~~l~tgs~------D~tv~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~s~~g~ 99 (332)
...|++.|.+|+|||||++|||||. |+++++|+..++.... ....|...|..++|+|++..+ +++.
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~--- 113 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASD--- 113 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEET---
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEEC---
Confidence 3579999999999999999999997 7889999988776533 334677789999999987544 4443
Q ss_pred CceeEEEEccCCceEE----EeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCC
Q 020021 100 DESLRLLSLHDNKYLR----YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQG 173 (332)
Q Consensus 100 d~~v~v~d~~~~~~~~----~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~ 173 (332)
|++|++||+.+++... ...+|.+.|++++|+|++++|++++.|++|++||++++++...+..+. .....+.+++
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence 7899999998876542 345899999999999999999999999999999999998887776543 2345565543
Q ss_pred --eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCC-CEEEEEcCCCeEEEEEccCCeEeEEeeecCCC
Q 020021 174 --LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250 (332)
Q Consensus 174 --~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 250 (332)
.+++++.|+.|++||++..+.. .......+...+.+++|+|++ .++++++.|+.|++||+.+++.+..+. .+
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~---~~ 268 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPA--TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA---VH 268 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCB--CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC---CC
T ss_pred CceeeeeccCCceEEEECCCCcee--eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe---cc
Confidence 5667778999999999865421 112223344568899999985 688899999999999999998887765 46
Q ss_pred CCcceEEEECCCC-CEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCC-CeeEEEeccce--EEEecc
Q 020021 251 RNSTLEASFSPEG-MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP-GSLMFVTGSSE--LSFWIP 320 (332)
Q Consensus 251 ~~~~~~v~~spdg-~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp-~~~~l~t~~~d--~~~w~~ 320 (332)
...+.+++|+|++ ++||+|+.||+|+|||+.+++.+.. ..|...|++|+|+| |+++|+|++.| +++|+.
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 6788999999997 6899999999999999998877655 47999999999999 78999999987 888875
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.4e-42 Score=314.65 Aligned_cols=281 Identities=21% Similarity=0.369 Sum_probs=231.3
Q ss_pred cCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeeccc------------------ceeEEEEccCCCEEEE
Q 020021 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY------------------GVDLVCFTSHPTTVIY 93 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~~~ 93 (332)
+|.+.|.+++|+|||++||+|+ |++++||++.+++.+..+..+.. .|..++|+|+++.+++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999976 78999999999998887765432 3789999999999998
Q ss_pred ecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC-ceeEEEcC-
Q 020021 94 SSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDD- 171 (332)
Q Consensus 94 ~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~-~~~~~~~~- 171 (332)
++. |++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++++...+.... .....+.+
T Consensus 141 ~~~---d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 141 GAE---DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EcC---CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECC
Confidence 864 8899999999999999999999999999999999999999999999999999998876665433 33455665
Q ss_pred CCe-EEEEEeCCEEEEEECccCCCCCeeEE-----EecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeE-----
Q 020021 172 QGL-VFAVAFGGYIRMFDARKYEKGPFDIF-----SVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL----- 240 (332)
Q Consensus 172 ~~~-~~~~~~~~~i~vwd~~~~~~~~~~~~-----~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~----- 240 (332)
++. +++++.|+.|++||++.... ...+ ...+|...+.+++|+|+|+++++++.|+.|++||+.....
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcE--EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 554 55555689999999875321 1111 1135667899999999999999999999999999876432
Q ss_pred -------eEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCC------CeeE
Q 020021 241 -------LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP------GSLM 307 (332)
Q Consensus 241 -------~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp------~~~~ 307 (332)
...+. .|...+.+++|+|++++|++|+.||.|++||+.+++.+..+..|...|.+++|+| ++.+
T Consensus 296 ~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~ 372 (393)
T 1erj_A 296 TPNSGTCEVTYI---GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNV 372 (393)
T ss_dssp -----CEEEEEE---CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEE
T ss_pred CCCCCcceEEEe---cccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCE
Confidence 22232 4667888999999999999999999999999999999999999999999999876 6899
Q ss_pred EEeccce--EEEeccc
Q 020021 308 FVTGSSE--LSFWIPD 321 (332)
Q Consensus 308 l~t~~~d--~~~w~~~ 321 (332)
|++|+.| +++|+..
T Consensus 373 l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 373 FATGSGDCKARIWKYK 388 (393)
T ss_dssp EEEEETTSEEEEEEEE
T ss_pred EEEECCCCcEEECccc
Confidence 9999988 7777754
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-41 Score=302.28 Aligned_cols=290 Identities=17% Similarity=0.319 Sum_probs=221.4
Q ss_pred hcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCC--eeeEEe-ee-cccceeEEEEccCCCEEEEecCC
Q 020021 22 QSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA--TCLKTI-NS-KKYGVDLVCFTSHPTTVIYSSKN 97 (332)
Q Consensus 22 ~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~~~~~s~~ 97 (332)
.++++.++|++|+++|.+++|+|+ +|+||+.|++|+|||+.++ +++..+ .. |...|..++|+|++..+++++.
T Consensus 2 ~~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~- 78 (330)
T 2hes_X 2 ASINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF- 78 (330)
T ss_dssp -CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET-
T ss_pred cccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC-
Confidence 567788999999999999999987 9999999999999999875 455555 34 8888999999999998888764
Q ss_pred CCCceeEEEEccC-------CceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCc----eEEEEEEecC--c
Q 020021 98 GWDESLRLLSLHD-------NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE----KCQGLLRVQG--R 164 (332)
Q Consensus 98 g~d~~v~v~d~~~-------~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~----~~~~~~~~~~--~ 164 (332)
|++|++||+.. .+.+..+.+|.+.|.+++|+|++++|+||+.|++|++||++.. ++...+..+. .
T Consensus 79 --D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 79 --DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp --TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred --CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 88999999853 3467788999999999999999999999999999999999432 3444443332 3
Q ss_pred eeEEEcCCCe-EEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCC--CCEEEEEcCCCeEEEEEccCC---
Q 020021 165 PAAAYDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND--GRLMLLTTMEGHIHVLDSFRG--- 238 (332)
Q Consensus 165 ~~~~~~~~~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d--g~~l~~~~~dg~i~i~d~~~~--- 238 (332)
....+++++. +++++.|++|++||.+.... .....+.+|...+.+++|+|+ +.++++++.|++|++||+..+
T Consensus 157 ~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 157 KHVIWHPSEALLASSSYDDTVRIWKDYDDDW--ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED 234 (330)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCCe--eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc
Confidence 4567777665 55555689999999864311 123455678889999999999 778999999999999998654
Q ss_pred -----eEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCc--eEEE-ecCCCC-CCceEEeCC--CeeE
Q 020021 239 -----TLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK--EVAS-WMSFDT-EPPVIKWTP--GSLM 307 (332)
Q Consensus 239 -----~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~--~~~~-~~~~~~-~v~~l~~sp--~~~~ 307 (332)
.....+ ...|...+.+++|+|++ +|++++.||+|+|||..+++ .+.. +..|.. .|.+++|+| ++++
T Consensus 235 ~~~~~~~~~~~--~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~ 311 (330)
T 2hes_X 235 DQQEWVCEAIL--PDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTI 311 (330)
T ss_dssp SCEEEEEEEEC--CSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CC
T ss_pred ccceeEEeeec--ccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceE
Confidence 222222 22367789999999765 88999999999999998764 2333 356776 899999999 7899
Q ss_pred EEeccce--EEEeccc
Q 020021 308 FVTGSSE--LSFWIPD 321 (332)
Q Consensus 308 l~t~~~d--~~~w~~~ 321 (332)
|++++.| +++|+.+
T Consensus 312 las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 312 LATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEETTSEEEEEEC-
T ss_pred EEEecCCCcEEEEEec
Confidence 9999988 7777754
No 16
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.4e-40 Score=295.74 Aligned_cols=290 Identities=18% Similarity=0.292 Sum_probs=237.2
Q ss_pred HhcccceeEeccCCCcEEEEEECCC-CCEEEEEeCCCcEEEEEcCCCe-----eeEEeeecccceeEEEEccCCCEEEEe
Q 020021 21 LQSMEVGMSFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAAT-----CLKTINSKKYGVDLVCFTSHPTTVIYS 94 (332)
Q Consensus 21 ~~~~~~~~~l~~h~~~I~~i~~s~d-g~~l~tgs~D~tv~iwd~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~ 94 (332)
-..+++..+|+||+++|++|+|+|+ +++|+|||.|++|+|||+.+.+ +.+++.+|...|..++|++++..++++
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 3456777899999999999999998 5899999999999999987643 456788899999999999999999988
Q ss_pred cCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe-c--CceeEEEcC
Q 020021 95 SKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV-Q--GRPAAAYDD 171 (332)
Q Consensus 95 s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-~--~~~~~~~~~ 171 (332)
+. |+.+++|+............+...+..+.++++++.|++++.|+.+++||............ + ......+.+
T Consensus 105 ~~---d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 181 (340)
T 4aow_A 105 SW---DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 181 (340)
T ss_dssp ET---TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECS
T ss_pred cc---cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEcc
Confidence 64 88999999999998888899999999999999999999999999999999876544322211 1 122334443
Q ss_pred C--C-eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecC
Q 020021 172 Q--G-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP 248 (332)
Q Consensus 172 ~--~-~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 248 (332)
. . .+++++.|+.|++||++..+ ......++...+.+++|+|+|+++++++.||.|++||+.+++.+..+.
T Consensus 182 ~~~~~~~~s~~~d~~i~i~d~~~~~----~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~--- 254 (340)
T 4aow_A 182 NSSNPIIVSCGWDKLVKVWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 254 (340)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE---
T ss_pred CCCCcEEEEEcCCCEEEEEECCCCc----eeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec---
Confidence 2 2 45566678999999997542 233455677889999999999999999999999999999999887765
Q ss_pred CCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe---------cCCCCCCceEEeCCCeeEEEeccce--EEE
Q 020021 249 VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW---------MSFDTEPPVIKWTPGSLMFVTGSSE--LSF 317 (332)
Q Consensus 249 ~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~---------~~~~~~v~~l~~sp~~~~l~t~~~d--~~~ 317 (332)
+...+..++|+|++.++ +++.|+.|++||+.++..+..+ ..|...|++++|+||+++|++|+.| +++
T Consensus 255 -~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~i 332 (340)
T 4aow_A 255 -GGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 332 (340)
T ss_dssp -CSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -CCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 23567889999988766 4567999999999887766554 3678889999999999999999988 888
Q ss_pred ecccc
Q 020021 318 WIPDL 322 (332)
Q Consensus 318 w~~~~ 322 (332)
|+...
T Consensus 333 W~~~t 337 (340)
T 4aow_A 333 WQVTI 337 (340)
T ss_dssp EEEEC
T ss_pred EeCCC
Confidence 88754
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.5e-41 Score=324.46 Aligned_cols=298 Identities=15% Similarity=0.207 Sum_probs=244.6
Q ss_pred ceeEecHHHHhcccceeEeccCCCcEEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCE
Q 020021 12 VSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTT 90 (332)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~-~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 90 (332)
..+.+++. .+...+|.+|.+.|.+++|+|++. +|+||+.|++|++||..+++++.++.+|...|..++|+|++..
T Consensus 129 ~~v~~wd~----~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~ 204 (611)
T 1nr0_A 129 GHVFLFDT----GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSL 204 (611)
T ss_dssp EEEEETTT----CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSE
T ss_pred eEEEEeeC----CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCE
Confidence 35666662 334567899999999999999987 5999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCceeEEEEccCCceEEEee-------cccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC
Q 020021 91 VIYSSKNGWDESLRLLSLHDNKYLRYFK-------GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG 163 (332)
Q Consensus 91 ~~~~s~~g~d~~v~v~d~~~~~~~~~~~-------~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~ 163 (332)
+++++. |++|++||+.+++.+..+. +|.+.|.+++|+|++++|+|++.|++|++||++++++...+....
T Consensus 205 las~s~---D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~ 281 (611)
T 1nr0_A 205 FASTGG---DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGT 281 (611)
T ss_dssp EEEEET---TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEEEEC---CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCC
Confidence 988864 8899999999999888884 899999999999999999999999999999999998877765431
Q ss_pred -----ceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCC
Q 020021 164 -----RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG 238 (332)
Q Consensus 164 -----~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~ 238 (332)
.....+ ....+++++.++.+++||..... ......+|...+.+++|+|||+++++++.|++|++||+.++
T Consensus 282 ~~~~~~~~~~~-~~~~l~s~s~d~~i~~~~~~~~~----~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 282 RIEDQQLGIIW-TKQALVSISANGFINFVNPELGS----IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp SGGGCEEEEEE-CSSCEEEEETTCCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CccceeEEEEE-cCCEEEEEeCCCcEEEEeCCCCC----cceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 112233 45667778889999999976432 23345678889999999999999999999999999999876
Q ss_pred eEeEEeee-c------------------------------------------------------C---------------
Q 020021 239 TLLSTYNV-K------------------------------------------------------P--------------- 248 (332)
Q Consensus 239 ~~~~~~~~-~------------------------------------------------------~--------------- 248 (332)
+....+.. + +
T Consensus 357 ~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~ 436 (611)
T 1nr0_A 357 ISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAI 436 (611)
T ss_dssp CEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEE
T ss_pred ceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEE
Confidence 54332100 0 0
Q ss_pred ---------CCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCce--EEEecCCCCCCceEEeCCCeeEEEeccce--E
Q 020021 249 ---------VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE--VASWMSFDTEPPVIKWTPGSLMFVTGSSE--L 315 (332)
Q Consensus 249 ---------~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~ 315 (332)
.+...+.+++|+|||++||+|+.|++|++||+.+++. +.. ..|...|++++|+||+++|++++.| +
T Consensus 437 ~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v 515 (611)
T 1nr0_A 437 YSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKV 515 (611)
T ss_dssp EETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCE
Confidence 0112346789999999999999999999999977643 233 6789999999999999999999887 8
Q ss_pred EEecccc
Q 020021 316 SFWIPDL 322 (332)
Q Consensus 316 ~~w~~~~ 322 (332)
++|+...
T Consensus 516 ~~w~~~~ 522 (611)
T 1nr0_A 516 IPYSVAN 522 (611)
T ss_dssp EEEEGGG
T ss_pred EEEEcCC
Confidence 8887653
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.4e-40 Score=314.19 Aligned_cols=281 Identities=20% Similarity=0.339 Sum_probs=238.8
Q ss_pred cccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCce
Q 020021 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (332)
Q Consensus 23 ~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~ 102 (332)
..+..+.+.+|.++|.+++|+|++++|++++.|++|++||... ..+..+..|...+..++|+|++..+++++. |+.
T Consensus 292 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---dg~ 367 (577)
T 2ymu_A 292 NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASD---DKT 367 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEET---TSE
T ss_pred CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeC---CCE
Confidence 4566778999999999999999999999999999999999864 456778888889999999999999988865 789
Q ss_pred eEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCeEEE-EE
Q 020021 103 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFA-VA 179 (332)
Q Consensus 103 v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~ 179 (332)
+++||. +++.+..+.+|...|++++|+|++++|++++.|++|++||.. ++....+..+. .....+++++.+++ ++
T Consensus 368 v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 445 (577)
T 2ymu_A 368 VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASAS 445 (577)
T ss_dssp EEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEc
Confidence 999996 567888999999999999999999999999999999999964 44555554332 23466777765554 55
Q ss_pred eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEE
Q 020021 180 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~ 259 (332)
.|+.|++||... . ....+.++...+.+++|+|||+++++++.|+.|++||. +++.+..+. .|...+.+++|
T Consensus 446 ~d~~v~~w~~~~----~-~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~---~h~~~v~~l~~ 516 (577)
T 2ymu_A 446 DDKTVKLWNRNG----Q-LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT---GHSSSVRGVAF 516 (577)
T ss_dssp TTSEEEEEETTS----C-EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEE---CCSSCEEEEEE
T ss_pred CCCEEEEEECCC----C-EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEe---CCCCCEEEEEE
Confidence 689999999632 1 22344567788999999999999999999999999995 677777776 46678999999
Q ss_pred CCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEec
Q 020021 260 SPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWI 319 (332)
Q Consensus 260 spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~ 319 (332)
+|||++||+++.||+|++||. +++.+..+..|...|++++|+||+++|+|++.| +++|+
T Consensus 517 s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 517 SPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999999999999996 678899999999999999999999999999988 77775
No 19
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.8e-40 Score=322.19 Aligned_cols=287 Identities=18% Similarity=0.276 Sum_probs=235.5
Q ss_pred hcccceeEeccCCCcEEEEEECCCC-CEEEEEeCCCcEEEEEcCC-----CeeeEEeeecccceeEEEEccCCCEEEEec
Q 020021 22 QSMEVGMSFRDYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTA-----ATCLKTINSKKYGVDLVCFTSHPTTVIYSS 95 (332)
Q Consensus 22 ~~~~~~~~l~~h~~~I~~i~~s~dg-~~l~tgs~D~tv~iwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 95 (332)
..++....|++|++.|++|+|+|++ ++|+|||.|++|+|||+.+ +.+...+.+|...|..++|++++..+++++
T Consensus 370 ~~l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 370 AGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp CSSEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred cccchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEe
Confidence 3456667899999999999999875 7999999999999999975 345677889999999999999999999886
Q ss_pred CCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe-----cCceeEEEc
Q 020021 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV-----QGRPAAAYD 170 (332)
Q Consensus 96 ~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-----~~~~~~~~~ 170 (332)
. |++|++||+.+++.+..+.+|...|.+++|+|++++|+|+|.|++|++||............ ....+..++
T Consensus 450 ~---Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 450 W---DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp T---TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred C---CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 4 88999999999999999999999999999999999999999999999999865543322211 113456666
Q ss_pred CCC---eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeec
Q 020021 171 DQG---LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247 (332)
Q Consensus 171 ~~~---~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 247 (332)
+++ .+++++.|+.|++||++..+ ....+.+|...+.+++|+|+|+++++++.||.|++||+.+++.+..+.
T Consensus 527 ~~~~~~~l~s~s~d~~v~vwd~~~~~----~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-- 600 (694)
T 3dm0_A 527 PNTLQPTIVSASWDKTVKVWNLSNCK----LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-- 600 (694)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB--
T ss_pred CCCCcceEEEEeCCCeEEEEECCCCc----EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec--
Confidence 654 46777789999999997542 233456787889999999999999999999999999999998876654
Q ss_pred CCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCC-------------------CCceEEeCCCeeEE
Q 020021 248 PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDT-------------------EPPVIKWTPGSLMF 308 (332)
Q Consensus 248 ~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~-------------------~v~~l~~sp~~~~l 308 (332)
+...+..++|+|++.+|++++ |+.|+|||+.+++.+..+..+.. .+++++|+|++++|
T Consensus 601 --~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l 677 (694)
T 3dm0_A 601 --ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTL 677 (694)
T ss_dssp --CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEE
T ss_pred --CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEE
Confidence 235678899999999988775 56699999999888776643211 24679999999999
Q ss_pred Eeccce--EEEecc
Q 020021 309 VTGSSE--LSFWIP 320 (332)
Q Consensus 309 ~t~~~d--~~~w~~ 320 (332)
++|+.| +++|+.
T Consensus 678 ~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 678 FSGYTDGVIRVWGI 691 (694)
T ss_dssp EEEETTSEEEEEEC
T ss_pred EEEcCCCeEEEEec
Confidence 999988 666654
No 20
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-39 Score=293.21 Aligned_cols=294 Identities=13% Similarity=0.170 Sum_probs=249.1
Q ss_pred HHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCC
Q 020021 19 EILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG 98 (332)
Q Consensus 19 ~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g 98 (332)
+..++......|.+|.++|++++|+|++++|++++.|++|++||+.+++.+..+..|...|..++|++++..+++++.
T Consensus 17 ~~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-- 94 (369)
T 3zwl_B 17 YFQGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA-- 94 (369)
T ss_dssp CSSCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--
T ss_pred EEeccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC--
Confidence 344666667789999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred CCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCC-----CcEEEEeCCCceEEEEE-----------Eec
Q 020021 99 WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLL-----------RVQ 162 (332)
Q Consensus 99 ~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~D-----g~i~iWd~~~~~~~~~~-----------~~~ 162 (332)
|+.|++||+.+++.+..+. |...|.+++|+|++++|++++.+ +.|++||++.......+ ...
T Consensus 95 -dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 172 (369)
T 3zwl_B 95 -DYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITH 172 (369)
T ss_dssp -TTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECC
T ss_pred -CCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCC
Confidence 8899999999999988888 88999999999999999999999 99999998654321111 111
Q ss_pred ----CceeEEEcCCCeEE-EEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccC
Q 020021 163 ----GRPAAAYDDQGLVF-AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237 (332)
Q Consensus 163 ----~~~~~~~~~~~~~~-~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~ 237 (332)
......+++++..+ +++.++.|++||++... ........+...+..++|+|+++++++++.|+.|++||+.+
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 173 EGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY---EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp TTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT---EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc---EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 22345566666544 45568999999997521 12333445667899999999999999999999999999999
Q ss_pred CeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCC--------------cEEEEECCCCceEEEecCCCCCCceEEeCC
Q 020021 238 GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG--------------SVYAWSVRSGKEVASWMSFDTEPPVIKWTP 303 (332)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg--------------~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp 303 (332)
++.+..+. +...+..++|+|+++++++++.++ .+++||+.+++.+..+..|...|.+++|+|
T Consensus 250 ~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~ 325 (369)
T 3zwl_B 250 LQVLKKYE----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISP 325 (369)
T ss_dssp CCEEEEEE----CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred Cceeeeec----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECC
Confidence 98887775 346778899999999999999998 899999999999999999999999999999
Q ss_pred CeeEEEeccce--EEEeccccc
Q 020021 304 GSLMFVTGSSE--LSFWIPDLS 323 (332)
Q Consensus 304 ~~~~l~t~~~d--~~~w~~~~~ 323 (332)
++++|++++.| +++|+++..
T Consensus 326 ~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 326 QGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp TSSEEEEEETTSEEEEEEECHH
T ss_pred CCCEEEEEcCCCeEEEEECccc
Confidence 99999999877 888877553
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=289.34 Aligned_cols=258 Identities=14% Similarity=0.211 Sum_probs=223.8
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIY 93 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 93 (332)
+++|+---....+...|.+|...|.+++|+|++.+++|++.|++|++||+.+++++..+..+...+..++|+|++..+++
T Consensus 60 v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 139 (321)
T 3ow8_A 60 VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLAT 139 (321)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEE
T ss_pred EEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEE
Confidence 45555333344556679999999999999999999999999999999999999999999988888999999999999988
Q ss_pred ecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcC
Q 020021 94 SSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDD 171 (332)
Q Consensus 94 ~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~ 171 (332)
++. |+.+++||+.+++....+..|...|.+++|+|++++|++++.|++|++||++++++...+..+. .....+++
T Consensus 140 g~~---dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 216 (321)
T 3ow8_A 140 GTH---VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 216 (321)
T ss_dssp ECT---TSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECT
T ss_pred EcC---CCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcC
Confidence 764 8899999999999999999999999999999999999999999999999999998877775443 34567788
Q ss_pred CCeEEEE-EeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCC
Q 020021 172 QGLVFAV-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250 (332)
Q Consensus 172 ~~~~~~~-~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 250 (332)
++.++++ +.|+.|++||++... ....+.+|...+.+++|+|+|+++++++.|++|++||+.+++++.++. .|
T Consensus 217 d~~~l~s~s~dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~---~h 289 (321)
T 3ow8_A 217 DSQLLVTASDDGYIKIYDVQHAN----LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF---DH 289 (321)
T ss_dssp TSCEEEEECTTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---CC
T ss_pred CCCEEEEEcCCCeEEEEECCCcc----eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc---CC
Confidence 7765554 468999999997542 233456777889999999999999999999999999999999888775 46
Q ss_pred CCcceEEEECCCCCEEEEEcCCCcEEEEECC
Q 020021 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVR 281 (332)
Q Consensus 251 ~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~ 281 (332)
...+..++|+|++++|++++.||+|++||..
T Consensus 290 ~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 290 QDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 6789999999999999999999999999963
No 22
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.6e-40 Score=302.54 Aligned_cols=255 Identities=18% Similarity=0.340 Sum_probs=220.3
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIY 93 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 93 (332)
+++|+ +.+.+..++|++|.+.|.+++|+|++++|++|+.|++|+|||+.+++++.++.+|...|..++|+|++..+++
T Consensus 132 i~vwd--~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s 209 (410)
T 1vyh_C 132 IKVWD--YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 209 (410)
T ss_dssp EEEEE--TTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEE
T ss_pred EEEEE--CCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEE
Confidence 45554 2345667899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcC
Q 020021 94 SSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDD 171 (332)
Q Consensus 94 ~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~ 171 (332)
++. |++|++||+.++.++..+.+|...|..+.++|++++|++++.|++|++||++++.+...+..+. ..+..+.+
T Consensus 210 ~s~---D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 286 (410)
T 1vyh_C 210 ASR---DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAP 286 (410)
T ss_dssp EET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECC
T ss_pred EeC---CCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcC
Confidence 764 8899999999999999999999999999999999999999999999999999988877664432 23344544
Q ss_pred C---------------------CeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeE
Q 020021 172 Q---------------------GLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHI 230 (332)
Q Consensus 172 ~---------------------~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i 230 (332)
. ..+++++.|+.|++||++... ....+.+|...+.+++|+|+|+++++++.||.|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~----~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i 362 (410)
T 1vyh_C 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362 (410)
T ss_dssp SCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEECSSSSCEEEEETTTEE
T ss_pred cccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc----eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 2 246666678999999997542 234455677889999999999999999999999
Q ss_pred EEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEEC
Q 020021 231 HVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSV 280 (332)
Q Consensus 231 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~ 280 (332)
++||+.+++.+..+. .|...+.+++|+|++.+|++||.||+|++|++
T Consensus 363 ~vwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 363 RVWDYKNKRCMKTLN---AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEECCTTSCCCEEEE---CCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEECCCCceEEEEc---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 999999988887776 46678999999999999999999999999986
No 23
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.2e-39 Score=287.90 Aligned_cols=250 Identities=14% Similarity=0.174 Sum_probs=203.5
Q ss_pred eeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCC--CeeeEEeeecccceeEEEEccC--CCEEEEecCCCCCce
Q 020021 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA--ATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGWDES 102 (332)
Q Consensus 27 ~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~s~~g~d~~ 102 (332)
+..|.+|++.|.+++|+|+|++||||+.|++|+|||+.+ .+++.++.+|...|..++|+++ +..+++++. |++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~---D~~ 78 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGK 78 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET---TTE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC---CCE
Confidence 456899999999999999999999999999999999974 4678899999999999999764 677777764 899
Q ss_pred eEEEEccCCc--eEEEeecccccEEEEEecCC--CCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEE
Q 020021 103 LRLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAV 178 (332)
Q Consensus 103 v~v~d~~~~~--~~~~~~~h~~~V~~v~~~~~--~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (332)
|++||+++++ .+..+.+|...|.+++|+|+ +.+|++++.|++|++||++++......
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~------------------- 139 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPI------------------- 139 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCE-------------------
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeee-------------------
Confidence 9999998874 56778899999999999997 889999999999999998764211000
Q ss_pred EeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCC-------------CCEEEEEcCCCeEEEEEccCCe----Ee
Q 020021 179 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-------------GRLMLLTTMEGHIHVLDSFRGT----LL 241 (332)
Q Consensus 179 ~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d-------------g~~l~~~~~dg~i~i~d~~~~~----~~ 241 (332)
...+|...+.+++|+|+ ++++++++.|++|++||+.+++ ..
T Consensus 140 ----------------------~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~ 197 (297)
T 2pm7_B 140 ----------------------IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 197 (297)
T ss_dssp ----------------------EEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred ----------------------eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEE
Confidence 01123345666777775 6799999999999999998765 33
Q ss_pred EEeeecCCCCCcceEEEECCCC---CEEEEEcCCCcEEEEECCCCc--e-EEEe--cCCCCCCceEEeCCCeeEEEeccc
Q 020021 242 STYNVKPVSRNSTLEASFSPEG---MFVISGSGDGSVYAWSVRSGK--E-VASW--MSFDTEPPVIKWTPGSLMFVTGSS 313 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~v~~spdg---~~l~sgs~Dg~i~vWd~~~~~--~-~~~~--~~~~~~v~~l~~sp~~~~l~t~~~ 313 (332)
..+. .|...+.+++|+|++ ++||+|+.|++|+|||+.+.. . ...+ ..|...+.+++|+|++++|++++.
T Consensus 198 ~~l~---~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 198 STLE---GHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp EEEC---CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred EEec---CCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 3443 577889999999995 899999999999999997643 1 2223 467788999999999999999988
Q ss_pred e--EEEeccccc
Q 020021 314 E--LSFWIPDLS 323 (332)
Q Consensus 314 d--~~~w~~~~~ 323 (332)
| +++|+....
T Consensus 275 D~~v~lw~~~~~ 286 (297)
T 2pm7_B 275 DNKVTLWKENLE 286 (297)
T ss_dssp TSCEEEEEECTT
T ss_pred CCcEEEEEECCC
Confidence 7 888987643
No 24
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.8e-40 Score=299.05 Aligned_cols=290 Identities=14% Similarity=0.179 Sum_probs=240.0
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCe------eeEEeeecccceeEEEEccC----C---CE
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT------CLKTINSKKYGVDLVCFTSH----P---TT 90 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~ 90 (332)
....+.|.+|.++|++++|+| ++|++|+.|++|+|||+.+++ ++..+..|...|..++|+++ + ..
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 345677899999999999998 799999999999999999888 78888899999999999999 8 88
Q ss_pred EEEecCCCCCceeEEEEccCCce-----EEEeecc-----cccEEEEEec----CCCCe-EEEeeCCCcEEEEeCCC---
Q 020021 91 VIYSSKNGWDESLRLLSLHDNKY-----LRYFKGH-----HDRVVSLSLC----SSKDC-FISGSLDRTVLLWDQRA--- 152 (332)
Q Consensus 91 ~~~~s~~g~d~~v~v~d~~~~~~-----~~~~~~h-----~~~V~~v~~~----~~~~~-l~s~s~Dg~i~iWd~~~--- 152 (332)
+++++. |+.|++||+.+++. +..+.+| ...|.+++|+ |+++. |++++.||.|++||+++
T Consensus 84 l~s~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 160 (397)
T 1sq9_A 84 VATTSF---SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD 160 (397)
T ss_dssp EEEEET---TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred EEEEcC---CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccc
Confidence 887764 78999999999887 8889999 5999999999 99999 99999999999999987
Q ss_pred ---ceEEE-----EEEe---------cCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecC---C---CCCc
Q 020021 153 ---EKCQG-----LLRV---------QGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG---D---ISDA 209 (332)
Q Consensus 153 ---~~~~~-----~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~---~---~~~v 209 (332)
+++.. .+.. .......+++++.+++++.++.|++||++..+ ....... + ...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 161 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLR----PLYNFESQHSMINNSNSI 236 (397)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTE----EEEEEECCC---CCCCCE
T ss_pred ccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCc----eeEEEeccccccccCCcc
Confidence 55443 4432 12345677777744444457999999997632 2223334 5 6789
Q ss_pred eeEEEcCCCCEEEEEcCC---CeEEEEEccCCeEeEEeeecC----------CCCCcceEEEECCCCCEEEEEcCCCcEE
Q 020021 210 NVVKFSNDGRLMLLTTME---GHIHVLDSFRGTLLSTYNVKP----------VSRNSTLEASFSPEGMFVISGSGDGSVY 276 (332)
Q Consensus 210 ~~v~~s~dg~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~----------~~~~~~~~v~~spdg~~l~sgs~Dg~i~ 276 (332)
.+++|+|+++++++++.| +.|++||+.+++.+..+.... .+...+.+++|+|++++|++++.||.|+
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp EEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred ceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 999999999999999999 999999999998887775310 0567889999999999999999999999
Q ss_pred EEECCCCceEEEec------CC---------------CCCCceEEeCCCe----------eEEEeccce--EEEecccc
Q 020021 277 AWSVRSGKEVASWM------SF---------------DTEPPVIKWTPGS----------LMFVTGSSE--LSFWIPDL 322 (332)
Q Consensus 277 vWd~~~~~~~~~~~------~~---------------~~~v~~l~~sp~~----------~~l~t~~~d--~~~w~~~~ 322 (332)
+||+.+++.+..+. .| ...|.+++|+|++ ++|++++.| +++|+.+.
T Consensus 317 iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 317 FWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred EEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 99999999999888 77 8999999999998 799999877 88887654
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.4e-38 Score=304.93 Aligned_cols=299 Identities=19% Similarity=0.334 Sum_probs=250.5
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIY 93 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 93 (332)
+.+|+ ...+....+.+|...|.+++|+|++++|++++.|+++++||.. ++.+..+.+|...|..++|+|++..+++
T Consensus 245 i~~w~---~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t 320 (577)
T 2ymu_A 245 VKLWN---RNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIAS 320 (577)
T ss_dssp EEEEC---TTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEe---CCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEE
Confidence 44554 2456778899999999999999999999999999999999964 6778888899999999999999999988
Q ss_pred ecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcC
Q 020021 94 SSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDD 171 (332)
Q Consensus 94 ~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~ 171 (332)
++. |+++++||+.. ..+..+.+|...|.+++|+|++++|++++.|++|++||.. +++...+..+. .....+++
T Consensus 321 ~~~---d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~ 395 (577)
T 2ymu_A 321 ASD---DKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSP 395 (577)
T ss_dssp EET---TSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-CCEEEEEECCSSCEEEEEECT
T ss_pred EeC---CCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-CCEEEEecCCCCCeEEEEECC
Confidence 764 78999999865 5567889999999999999999999999999999999964 45555554332 23566777
Q ss_pred CCeEE-EEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCC
Q 020021 172 QGLVF-AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250 (332)
Q Consensus 172 ~~~~~-~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 250 (332)
++..+ +++.|+.|++||... . ......++...+..++|+||++++++++.|+.|++||. +++.+..+. .|
T Consensus 396 dg~~l~~~~~d~~v~~~~~~~----~-~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~---~~ 466 (577)
T 2ymu_A 396 DGQTIASASDDKTVKLWNRNG----Q-LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLT---GH 466 (577)
T ss_dssp TSSCEEEEETTSEEEEECTTC----C-EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEE---CC
T ss_pred CCCEEEEEeCCCEEEEEeCCC----C-EEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEc---CC
Confidence 77544 455689999999532 1 12334467778999999999999999999999999996 456666655 46
Q ss_pred CCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEecccccccccc
Q 020021 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDLSKLGAY 328 (332)
Q Consensus 251 ~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~~~~~~~ 328 (332)
...+.+++|+||+++|++++.|++|++||. +++.+..+..|...|++++|+||+++|++++.| +++|+.+.+.+..+
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 545 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEE
Confidence 678899999999999999999999999996 678899999999999999999999999999887 88999877777777
Q ss_pred ccc
Q 020021 329 VGR 331 (332)
Q Consensus 329 ~~~ 331 (332)
.||
T Consensus 546 ~~h 548 (577)
T 2ymu_A 546 TGH 548 (577)
T ss_dssp ECC
T ss_pred cCC
Confidence 776
No 26
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.7e-39 Score=291.12 Aligned_cols=292 Identities=14% Similarity=0.185 Sum_probs=231.7
Q ss_pred hcccceeEeccCCCcEEEEEECCCC-CEEEEEeCCCcEEEEEcCCCeeeEEee--ecccceeEEEEcc-CCCEEEEecCC
Q 020021 22 QSMEVGMSFRDYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTS-HPTTVIYSSKN 97 (332)
Q Consensus 22 ~~~~~~~~l~~h~~~I~~i~~s~dg-~~l~tgs~D~tv~iwd~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~~~~~s~~ 97 (332)
..+++.+.+.+|.+.|.+++|+|++ ++|++|+.|++|+|||+.+++....+. +|...|..++|+| ++..+++++.
T Consensus 61 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~- 139 (383)
T 3ei3_B 61 KSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI- 139 (383)
T ss_dssp TTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET-
T ss_pred cccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC-
Confidence 4577788999999999999999999 999999999999999999888877765 5888999999999 5667776654
Q ss_pred CCCceeEEEEccCCceEEEeecc---cccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCC
Q 020021 98 GWDESLRLLSLHDNKYLRYFKGH---HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQ 172 (332)
Q Consensus 98 g~d~~v~v~d~~~~~~~~~~~~h---~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~ 172 (332)
|+.|++||+.+ ..+..+..| ...|.+++|+|++++|++++.|++|++||++ +++...+..+. .....++++
T Consensus 140 --d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 140 --RGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp --TTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSS
T ss_pred --CCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCC
Confidence 88999999986 555666544 4889999999999999999999999999995 55555554332 345667776
Q ss_pred Ce--EEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcC-CCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC
Q 020021 173 GL--VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV 249 (332)
Q Consensus 173 ~~--~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 249 (332)
+. +++++.|+.|++||++............ ++...+.+++|+| +|+++++++.|+.|++||+.+++.+..+..+..
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 294 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPH 294 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCB
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccc
Confidence 64 5556678999999998754322222222 4667899999999 999999999999999999988876655543211
Q ss_pred ----C----------CCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecC--CCCCCceEEeCCCeeEEEeccc
Q 020021 250 ----S----------RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMS--FDTEPPVIKWTPGSLMFVTGSS 313 (332)
Q Consensus 250 ----~----------~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~--~~~~v~~l~~sp~~~~l~t~~~ 313 (332)
+ ...+..++|+||+++ +|+.||.|++||+.+++.+..+.. |...+..++|+|++++|++++.
T Consensus 295 ~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd 372 (383)
T 3ei3_B 295 RQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGMG 372 (383)
T ss_dssp CCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEET
T ss_pred cccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEecC
Confidence 1 123334677788877 888999999999999999988876 4567788899999999999863
Q ss_pred e-EEEeccc
Q 020021 314 E-LSFWIPD 321 (332)
Q Consensus 314 d-~~~w~~~ 321 (332)
. +++|+++
T Consensus 373 ~~i~iw~~~ 381 (383)
T 3ei3_B 373 FNILIWNRE 381 (383)
T ss_dssp TEEEEEECC
T ss_pred CcEEEEecC
Confidence 2 8888765
No 27
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-38 Score=277.16 Aligned_cols=284 Identities=18% Similarity=0.271 Sum_probs=235.4
Q ss_pred hcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCc
Q 020021 22 QSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE 101 (332)
Q Consensus 22 ~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~ 101 (332)
...++.++|.+|.+.|.+++| |++++|++|+.|++|++||+.+++....+..|...+..++|++++..+++++. |+
T Consensus 6 ~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg 81 (313)
T 3odt_A 6 TGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGK---DT 81 (313)
T ss_dssp CCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEET---TS
T ss_pred ccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecC---CC
Confidence 356778899999999999999 99999999999999999999999999999999999999999999999998865 78
Q ss_pred eeEEEEccCC---ceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCc--eeEEEc--CCCe
Q 020021 102 SLRLLSLHDN---KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYD--DQGL 174 (332)
Q Consensus 102 ~v~v~d~~~~---~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~--~~~~~~--~~~~ 174 (332)
.+++|++... +.+..+.+|...|.++.| +++.|++++.|+.|++|| .+.....+..+.. ....+. ....
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENK 157 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTE
T ss_pred eEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCE
Confidence 9999998654 567788999999999999 578999999999999999 4444544443332 223333 3456
Q ss_pred EEEEEeCCEEEEEECccCCCCCeeEEEecC-CCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCc
Q 020021 175 VFAVAFGGYIRMFDARKYEKGPFDIFSVGG-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNS 253 (332)
Q Consensus 175 ~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 253 (332)
+++++.++.|++||.... ...... +...+.+++|+|++. +++++.||.|++||+.+++.+..+. .|...
T Consensus 158 l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~ 227 (313)
T 3odt_A 158 FLTASADKTIKLWQNDKV------IKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE---GHESF 227 (313)
T ss_dssp EEEEETTSCEEEEETTEE------EEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE---CCSSC
T ss_pred EEEEECCCCEEEEecCce------EEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh---cCCce
Confidence 666677899999994321 122223 566889999999999 8999999999999999999888776 45678
Q ss_pred ceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEeccccccc
Q 020021 254 TLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDLSKL 325 (332)
Q Consensus 254 ~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~~~~ 325 (332)
+..++|+|++ .|++++.||.|++||+.+++.+..+..|...+.+++|+|+++++ +++.| +++|+....++
T Consensus 228 i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 228 VYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDII-VGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEE-EEETTSCEEEEESCGGGC
T ss_pred EEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEE-EEeCCCcEEEEeCCCCce
Confidence 8999999999 58899999999999999999999999999999999999999855 45555 88998765443
No 28
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-39 Score=293.69 Aligned_cols=281 Identities=15% Similarity=0.191 Sum_probs=235.7
Q ss_pred ccCCCcEEEEEECCCCC-EEEEEeCCCcEEEEEc----CCCe------eeEEeee----------cccceeEEEEccCCC
Q 020021 31 RDYNGRISSMDFHKSSS-YLVTASDDESIRLYDV----TAAT------CLKTINS----------KKYGVDLVCFTSHPT 89 (332)
Q Consensus 31 ~~h~~~I~~i~~s~dg~-~l~tgs~D~tv~iwd~----~~~~------~~~~~~~----------~~~~v~~~~~~~~~~ 89 (332)
..|.++|.+++|+|+++ +|++|+.|++|++||+ .+++ ....+.. |...|..++|+|++.
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 45669999999999999 9999999999999999 8887 4444444 566899999999999
Q ss_pred EEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC------
Q 020021 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG------ 163 (332)
Q Consensus 90 ~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~------ 163 (332)
.+++++. |+.|++|| .+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+....
T Consensus 122 ~l~~~~~---dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 122 SIVTGVE---NGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp EEEEEET---TSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred EEEEEeC---CCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 9988865 78999999 6778889999999999999999999999999999999999999988776664332
Q ss_pred -----------ceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEE
Q 020021 164 -----------RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHV 232 (332)
Q Consensus 164 -----------~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i 232 (332)
.....+.+++.+++++.++.|++||++.... . .....+...+..++|+|+++++++++.|+.|++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~--~--~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 273 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTP--T--GKLIGHHGPISVLEFNDTNKLLLSASDDGTLRI 273 (425)
T ss_dssp --------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSC--S--EEECCCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred eeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCce--e--eeeccCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 2334556677888888899999999986432 2 223356678999999999999999999999999
Q ss_pred EEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEecc
Q 020021 233 LDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS 312 (332)
Q Consensus 233 ~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~ 312 (332)
||+.+++.+..+. .+...+..++|+|++ ++++++.||.|++||+.+++.+..+..|...+.+++|+|++++|++++
T Consensus 274 ~d~~~~~~~~~~~---~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 274 WHGGNGNSQNCFY---GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp ECSSSBSCSEEEC---CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred EECCCCccceEec---CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE
Confidence 9999888776664 456788899999999 999999999999999999999999999999999999999999999998
Q ss_pred ce--EEEeccccc
Q 020021 313 SE--LSFWIPDLS 323 (332)
Q Consensus 313 ~d--~~~w~~~~~ 323 (332)
.| +.+|+....
T Consensus 350 ~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 350 MDGQVNVYDLKKL 362 (425)
T ss_dssp TTSCEEEEECHHH
T ss_pred CCCeEEEEECCCC
Confidence 76 888887543
No 29
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=285.12 Aligned_cols=245 Identities=20% Similarity=0.261 Sum_probs=200.2
Q ss_pred eEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEe----eecccceeEEEEccCCCEEEEecCCCCCcee
Q 020021 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI----NSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (332)
Q Consensus 28 ~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v 103 (332)
.....|...|.+++|+|++ .|++|+.|++|+|||+.+++++..+ .+|...|..++|+|+++.+++++. |++|
T Consensus 76 ~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~---d~~i 151 (344)
T 4gqb_B 76 SAGVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK---DICI 151 (344)
T ss_dssp SEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCE
T ss_pred eeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC---CCeE
Confidence 3345677889999999985 7889999999999999998876543 468889999999999999998864 8899
Q ss_pred EEEEccCCceEEEeecccccEEEEEecCCCC-eEEEeeCCCcEEEEeCCCceEEEEEEecC----ceeEEEcC-CCeEEE
Q 020021 104 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQG----RPAAAYDD-QGLVFA 177 (332)
Q Consensus 104 ~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~ 177 (332)
++||+++++++..+.+|.+.|++++|++++. .|+|++.|++|++||++++++...+.... .....+.+ ++.+++
T Consensus 152 ~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 152 KVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEE
T ss_pred EEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceE
Confidence 9999999999999999999999999999875 78999999999999999988776553221 23455665 445554
Q ss_pred -EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCC-CEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcce
Q 020021 178 -VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (332)
Q Consensus 178 -~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 255 (332)
++.|+.|++||++..+. ...+.+|...|++++|+|+| ++|++++.|++|++||..+++++. +. .|...|.
T Consensus 232 sg~~dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~---~H~~~V~ 303 (344)
T 4gqb_B 232 FGDENGTVSLVDTKSTSC----VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQ---AHRDFVR 303 (344)
T ss_dssp EEETTSEEEEEESCC--C----CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-EC---CCSSCEE
T ss_pred EeccCCcEEEEECCCCcE----EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-Ec---CCCCCEE
Confidence 55689999999986432 23445677889999999998 578999999999999999887654 22 5778899
Q ss_pred EEEECCCCC-EEEEEcCCCcEEEEECCCCc
Q 020021 256 EASFSPEGM-FVISGSGDGSVYAWSVRSGK 284 (332)
Q Consensus 256 ~v~~spdg~-~l~sgs~Dg~i~vWd~~~~~ 284 (332)
+++|+|+++ +|+|||.||+|++|++.+..
T Consensus 304 ~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 304 DATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999999986 57799999999999998754
No 30
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.9e-38 Score=281.39 Aligned_cols=255 Identities=21% Similarity=0.301 Sum_probs=212.3
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCC----eeeEEeeecccceeEEEEccCCC
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTSHPT 89 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~ 89 (332)
+.+|+. ...+....+..|...|.+++|+|++++|++|+.|+++++||+.+. .....+.+|...+..+.|.+++.
T Consensus 79 v~iWd~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 156 (340)
T 1got_B 79 LIIWDS--YTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ 156 (340)
T ss_dssp EEEEET--TTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE
T ss_pred EEEEEC--CCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc
Confidence 455542 334566788999999999999999999999999999999999865 34567788888899999988765
Q ss_pred EEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeE
Q 020021 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAA 167 (332)
Q Consensus 90 ~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~ 167 (332)
+++++. |++|++||+.+++.+..+.+|.+.|.+++|+|++++|++|+.|++|++||++++.+...+..+. ....
T Consensus 157 -l~s~s~---d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v 232 (340)
T 1got_B 157 -IVTSSG---DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232 (340)
T ss_dssp -EEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEE
T ss_pred -EEEEEC---CCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEE
Confidence 666543 8899999999999999999999999999999999999999999999999999988877775433 3456
Q ss_pred EEcCCCeEEE-EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeee
Q 020021 168 AYDDQGLVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV 246 (332)
Q Consensus 168 ~~~~~~~~~~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 246 (332)
.+++++.+++ ++.|+.|++||++... ....+........+.+++|+|+|+++++++.|+.|++||..+++.+..+.
T Consensus 233 ~~~p~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~- 309 (340)
T 1got_B 233 CFFPNGNAFATGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA- 309 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred EEcCCCCEEEEEcCCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEee-
Confidence 7777775554 5568999999997642 12222222333468999999999999999999999999999988887776
Q ss_pred cCCCCCcceEEEECCCCCEEEEEcCCCcEEEEE
Q 020021 247 KPVSRNSTLEASFSPEGMFVISGSGDGSVYAWS 279 (332)
Q Consensus 247 ~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd 279 (332)
.|...+.+++|+|||++|||||.||+|+|||
T Consensus 310 --~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 310 --GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp --CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred --cCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 5678899999999999999999999999996
No 31
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=286.04 Aligned_cols=290 Identities=15% Similarity=0.206 Sum_probs=232.6
Q ss_pred HHHHhcccceeEeccCCCcEEEEEECCC---CCEEEEEeCCCcEEEEEcCC-Ceee-EEeeecccceeEEEEccCCCEEE
Q 020021 18 EEILQSMEVGMSFRDYNGRISSMDFHKS---SSYLVTASDDESIRLYDVTA-ATCL-KTINSKKYGVDLVCFTSHPTTVI 92 (332)
Q Consensus 18 ~~~~~~~~~~~~l~~h~~~I~~i~~s~d---g~~l~tgs~D~tv~iwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~~ 92 (332)
++-....+..+.+.+|.+.|++++|+|+ |++|++|+.|++|+|||+.+ +..+ ..+..|...|..++|++++..++
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 3344556677789999999999999999 59999999999999999997 5555 77888999999999999999999
Q ss_pred EecCCCCCceeEEEEccCCceEEEeecccccEEEEEe--cCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEc
Q 020021 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSL--CSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYD 170 (332)
Q Consensus 93 ~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~--~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~ 170 (332)
+++. |+.|++||+.+++.+. +.+|...|.+++| ++++++|++++.||+|++||++++++...+..+........
T Consensus 103 s~~~---dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 178 (368)
T 3mmy_A 103 TASC---DKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADV 178 (368)
T ss_dssp EEET---TSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEE
T ss_pred EEcC---CCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEe
Confidence 8864 8899999999988665 6679999999999 88999999999999999999999887777765543333222
Q ss_pred CCCeEEEEEeCCEEEEEECccCCCCCeeEEEe-cCCCCCceeEEEcCCCCE----EEEEcCCCeEEEEEccCC---eEeE
Q 020021 171 DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSV-GGDISDANVVKFSNDGRL----MLLTTMEGHIHVLDSFRG---TLLS 242 (332)
Q Consensus 171 ~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~-~~~~~~v~~v~~s~dg~~----l~~~~~dg~i~i~d~~~~---~~~~ 242 (332)
....++.+..++.+++|+++.... ..... .........+++.+++.. +++++.||.|++||+... ..+.
T Consensus 179 ~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~ 255 (368)
T 3mmy_A 179 IYPMAVVATAERGLIVYQLENQPS---EFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNF 255 (368)
T ss_dssp ETTEEEEEEGGGCEEEEECSSSCE---EEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSE
T ss_pred cCCeeEEEeCCCcEEEEEeccccc---hhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccce
Confidence 345667777789999999975421 11111 112234556666665544 999999999999999876 3344
Q ss_pred EeeecCC---------CCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccc
Q 020021 243 TYNVKPV---------SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS 313 (332)
Q Consensus 243 ~~~~~~~---------~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~ 313 (332)
.+..+.. +...+.+++|+|++++|++|+.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 256 TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp EEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred eeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 4432110 1116889999999999999999999999999999999999999999999999999999999987
Q ss_pred e
Q 020021 314 E 314 (332)
Q Consensus 314 d 314 (332)
|
T Consensus 336 d 336 (368)
T 3mmy_A 336 Y 336 (368)
T ss_dssp C
T ss_pred c
Confidence 6
No 32
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=286.45 Aligned_cols=287 Identities=15% Similarity=0.220 Sum_probs=225.3
Q ss_pred eeEeccCCCcEEEEEECCCCCEE-EEEeC---CCcEEEEEcCCCeeeEEee-ecccceeEEEEccC---CCEEEEecCCC
Q 020021 27 GMSFRDYNGRISSMDFHKSSSYL-VTASD---DESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSH---PTTVIYSSKNG 98 (332)
Q Consensus 27 ~~~l~~h~~~I~~i~~s~dg~~l-~tgs~---D~tv~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~---~~~~~~~s~~g 98 (332)
...+++|.+.|.+++|+|+++.+ ++|+. |++|+|||+.+++...... .|...|..++|+++ +..+++++.
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-- 88 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF-- 88 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET--
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecC--
Confidence 45578999999999999999655 56666 9999999999988765543 67788999999998 577887764
Q ss_pred CCceeEEEEccCCc-eEEEeecccccEEEEE------ecCCCCeEEEeeCCCcEEEEeCCCce-EEEEEEecC------c
Q 020021 99 WDESLRLLSLHDNK-YLRYFKGHHDRVVSLS------LCSSKDCFISGSLDRTVLLWDQRAEK-CQGLLRVQG------R 164 (332)
Q Consensus 99 ~d~~v~v~d~~~~~-~~~~~~~h~~~V~~v~------~~~~~~~l~s~s~Dg~i~iWd~~~~~-~~~~~~~~~------~ 164 (332)
|+.|++||+.+++ .+..+.+|...|.+++ |+|++++|++++.|++|++||++++. +...+.... .
T Consensus 89 -dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 89 -GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDC 167 (357)
T ss_dssp -TSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCE
T ss_pred -CCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCce
Confidence 7899999999987 8889999999999995 46889999999999999999998876 444443211 1
Q ss_pred eeEE----EcCCCeEEEE-EeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcC---CCCEEEEEcCCCeEEEEEcc
Q 020021 165 PAAA----YDDQGLVFAV-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN---DGRLMLLTTMEGHIHVLDSF 236 (332)
Q Consensus 165 ~~~~----~~~~~~~~~~-~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~---dg~~l~~~~~dg~i~i~d~~ 236 (332)
.... +++++.++++ +.++.|++||++..+. .....+...+.+++|+| ++.++++++.||.|++||+.
T Consensus 168 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 168 WTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-----RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp EEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred EEEEEEeccCCCCCEEEEEccCCeEEEEECccCce-----eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 1223 4456655554 4579999999986432 12223456899999999 99999999999999999998
Q ss_pred CCeEeEEee--ecCCCCCcceEEEECCCCC-EEEEEcCCCcEEEEECCCC-------------------ceEEEecCCCC
Q 020021 237 RGTLLSTYN--VKPVSRNSTLEASFSPEGM-FVISGSGDGSVYAWSVRSG-------------------KEVASWMSFDT 294 (332)
Q Consensus 237 ~~~~~~~~~--~~~~~~~~~~~v~~spdg~-~l~sgs~Dg~i~vWd~~~~-------------------~~~~~~~~~~~ 294 (332)
+++.+..+. ....+...+..++|+|+++ +|++|+.||.|++||+.++ +.+..+..|..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 322 (357)
T 3i2n_A 243 TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ 322 (357)
T ss_dssp EEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS
T ss_pred CCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC
Confidence 766544332 1124667889999999999 8999999999999999754 35667788999
Q ss_pred CCceEEeCCCeeEEE-eccce--EEEeccc
Q 020021 295 EPPVIKWTPGSLMFV-TGSSE--LSFWIPD 321 (332)
Q Consensus 295 ~v~~l~~sp~~~~l~-t~~~d--~~~w~~~ 321 (332)
.|.+++|+|++++|+ +++.| +++|+..
T Consensus 323 ~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 323 PISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 999999999999887 78877 6666653
No 33
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-39 Score=295.31 Aligned_cols=282 Identities=15% Similarity=0.237 Sum_probs=231.7
Q ss_pred cCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCC----CeeeEEeeecccceeEEEEccC-CCEEEEecCCCCCceeEEE
Q 020021 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA----ATCLKTINSKKYGVDLVCFTSH-PTTVIYSSKNGWDESLRLL 106 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~s~~g~d~~v~v~ 106 (332)
.|...|.+++|+|++++|++|+.|++|++||+.+ .+++..+..|...|..++|+|+ +..+++++. |+.|++|
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~v~iw 141 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN---NGEIFIW 141 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS---SSCEEBC
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC---CCeEEEE
Confidence 5899999999999999999999999999999987 4578888899999999999998 777777754 8899999
Q ss_pred EccCCc------eEE---EeecccccEEEEEecCC-CCeEEEeeCCCcEEEEeCCCceEEEEEEec--------CceeEE
Q 020021 107 SLHDNK------YLR---YFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQ--------GRPAAA 168 (332)
Q Consensus 107 d~~~~~------~~~---~~~~h~~~V~~v~~~~~-~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~--------~~~~~~ 168 (332)
|+.+++ ... .+.+|...|.+++|+|+ +.+|++++.|+.|++||++++++...+... ......
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE
Confidence 998876 322 34689999999999998 789999999999999999998887776543 134566
Q ss_pred EcCCC--eEEEEEeCC---EEEEEECccCCCCCeeEEEec-CCCCCceeEEEcC-CCCEEEEEcCCCeEEEEEccCCeEe
Q 020021 169 YDDQG--LVFAVAFGG---YIRMFDARKYEKGPFDIFSVG-GDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLL 241 (332)
Q Consensus 169 ~~~~~--~~~~~~~~~---~i~vwd~~~~~~~~~~~~~~~-~~~~~v~~v~~s~-dg~~l~~~~~dg~i~i~d~~~~~~~ 241 (332)
+++++ .+++++.++ .|++||++..... . .... ++...+.+++|+| +++++++++.||.|++||+.+++.+
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-~--~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTP-L--QTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-S--BCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-c--EEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 77765 455555566 9999999864321 1 1223 5667899999999 9999999999999999999999988
Q ss_pred EEeeecCCCCCcceEEEECCCC-CEEEEEcCCCcEEEEECCCCceEEEec------------------------------
Q 020021 242 STYNVKPVSRNSTLEASFSPEG-MFVISGSGDGSVYAWSVRSGKEVASWM------------------------------ 290 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~v~~spdg-~~l~sgs~Dg~i~vWd~~~~~~~~~~~------------------------------ 290 (332)
..+. .|...+..++|+|++ ++|++++.||.|++||+.+.+......
T Consensus 299 ~~~~---~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (416)
T 2pm9_A 299 SQFP---ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFH 375 (416)
T ss_dssp EEEE---CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSC
T ss_pred eeec---CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccccccccc
Confidence 8776 456778899999999 899999999999999998765422111
Q ss_pred -----CCCCCCceEEeCCCeeEEEeccce--EEEecccc
Q 020021 291 -----SFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDL 322 (332)
Q Consensus 291 -----~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~ 322 (332)
.|..++..++|+|||++|++++.| +++|++..
T Consensus 376 ~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 376 LQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp CCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred ccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 156677899999999999999987 77787654
No 34
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.4e-39 Score=286.78 Aligned_cols=249 Identities=14% Similarity=0.181 Sum_probs=194.8
Q ss_pred eEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCe--eeEEeeecccceeEEEEcc--CCCEEEEecCCCCCcee
Q 020021 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWDESL 103 (332)
Q Consensus 28 ~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~~~~~s~~g~d~~v 103 (332)
..+.+|+++|++++|+|+|++||||+.|++|+|||+.++. ++.++.+|...|..++|++ ++..+++++. |++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~---D~~v 83 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY---DRKV 83 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET---TSCE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC---CCEE
Confidence 3478999999999999999999999999999999998775 4678899999999999975 3677887764 8999
Q ss_pred EEEEccCCc--eEEEeecccccEEEEEecCC--CCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEE
Q 020021 104 RLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVA 179 (332)
Q Consensus 104 ~v~d~~~~~--~~~~~~~h~~~V~~v~~~~~--~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (332)
++||+.+++ .+..+.+|...|++++|+|+ +.+|++++.|++|++||++.+.......
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~------------------- 144 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK------------------- 144 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECC-------------------
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceee-------------------
Confidence 999998874 56778899999999999997 7899999999999999987642110000
Q ss_pred eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCC-----------------CCEEEEEcCCCeEEEEEccCC---e
Q 020021 180 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-----------------GRLMLLTTMEGHIHVLDSFRG---T 239 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d-----------------g~~l~~~~~dg~i~i~d~~~~---~ 239 (332)
...+|...+.+++|+|+ ++++++++.|+.|++||+..+ +
T Consensus 145 ---------------------~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~ 203 (316)
T 3bg1_A 145 ---------------------INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK 203 (316)
T ss_dssp ---------------------BTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE
T ss_pred ---------------------eeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc
Confidence 00123334555566665 578999999999999998754 2
Q ss_pred EeEEeeecCCCCCcceEEEECCCC----CEEEEEcCCCcEEEEECCCCc----eEEEecCCCCCCceEEeCCCeeEEEec
Q 020021 240 LLSTYNVKPVSRNSTLEASFSPEG----MFVISGSGDGSVYAWSVRSGK----EVASWMSFDTEPPVIKWTPGSLMFVTG 311 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~v~~spdg----~~l~sgs~Dg~i~vWd~~~~~----~~~~~~~~~~~v~~l~~sp~~~~l~t~ 311 (332)
.+..+. .|...+.+++|+|++ ++||+|+.||+|++|++.+.. ....+..|...|.+++|+|++++|+++
T Consensus 204 ~~~~l~---~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~ 280 (316)
T 3bg1_A 204 EEQKLE---AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVS 280 (316)
T ss_dssp EEECCB---CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE
T ss_pred eeeecc---cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE
Confidence 344443 567889999999987 899999999999999997621 123345688899999999999999999
Q ss_pred cce--EEEecccc
Q 020021 312 SSE--LSFWIPDL 322 (332)
Q Consensus 312 ~~d--~~~w~~~~ 322 (332)
+.| +++|+...
T Consensus 281 ~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 281 GGDNKVTLWKESV 293 (316)
T ss_dssp ESSSCEEEEEECT
T ss_pred cCCCeEEEEEECC
Confidence 887 88888653
No 35
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.6e-37 Score=273.69 Aligned_cols=277 Identities=11% Similarity=0.192 Sum_probs=229.3
Q ss_pred eccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeee---EEee--ecccceeEEEEccCCCEEEEecCCCCCceeE
Q 020021 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL---KTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (332)
Q Consensus 30 l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~---~~~~--~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~ 104 (332)
..+|.++|.+++|+|++++|++++ |++|++||+.+++.. ..+. .|...+..++|+|++..+++++. |+.|+
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~ 122 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE---ASTLS 122 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES---SSEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC---CCcEE
Confidence 458999999999999999999999 999999999876543 3333 57778999999999998888764 78999
Q ss_pred EEEccCCc--eEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCe-EEEEE
Q 020021 105 LLSLHDNK--YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGL-VFAVA 179 (332)
Q Consensus 105 v~d~~~~~--~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~ 179 (332)
+||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..+. .....+++++. +++++
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 202 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG 202 (337)
T ss_dssp EEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEe
Confidence 99999877 567788999999999999999999999999999999999988777665432 33556777665 55555
Q ss_pred eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEE
Q 020021 180 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~ 259 (332)
.++.|++||++..+. .... .+...+..++|+|+++++++++.++.|++||+.+++... +. .+...+..++|
T Consensus 203 ~dg~i~~~d~~~~~~--~~~~---~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~---~~~~~v~~~~~ 273 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQ--LQQH---DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LH---LHESCVLSLKF 273 (337)
T ss_dssp TTSEEEEEETTTTEE--EEEE---ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE-EC---CCSSCEEEEEE
T ss_pred cCCcEEEEECCCCce--Eeee---cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE-Ec---CCccceeEEEE
Confidence 689999999976431 1112 234578999999999999999999999999998877543 22 45678899999
Q ss_pred CCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEecc
Q 020021 260 SPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 320 (332)
Q Consensus 260 spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~ 320 (332)
+|++++|++++.||.|++||+.+++.+.. ..|...+.+++|+|++++|++++.| +.+|+.
T Consensus 274 ~~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 274 AYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 99999999999999999999999887744 4577889999999999999999887 777764
No 36
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.2e-38 Score=293.27 Aligned_cols=299 Identities=14% Similarity=0.171 Sum_probs=221.7
Q ss_pred hcccceeEeccCCCcEEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeee--EEeeecccceeEEEEcc-CCCEEEEecCC
Q 020021 22 QSMEVGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCL--KTINSKKYGVDLVCFTS-HPTTVIYSSKN 97 (332)
Q Consensus 22 ~~~~~~~~l~~h~~~I~~i~~s~-dg~~l~tgs~D~tv~iwd~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~~~~~s~~ 97 (332)
..+++.....+|...|++|+|+| ++++||+|+.||+|+|||+.+++.. ..+.+|...|..++|+| ++..+++++
T Consensus 107 ~~~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s-- 184 (435)
T 4e54_B 107 DSYRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS-- 184 (435)
T ss_dssp TTTTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC--
T ss_pred cceeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe--
Confidence 34566778889999999999999 4679999999999999999877644 44567888999999998 566777765
Q ss_pred CCCceeEEEEccCCceEEEeec--ccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec--CceeEEEcCCC
Q 020021 98 GWDESLRLLSLHDNKYLRYFKG--HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ--GRPAAAYDDQG 173 (332)
Q Consensus 98 g~d~~v~v~d~~~~~~~~~~~~--h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~--~~~~~~~~~~~ 173 (332)
.|++|++||++++........ +...+.+++|+|++++|++|+.||+|++||++... ...+..+ ......+++.+
T Consensus 185 -~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~~~~~~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 185 -MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-LWNLRMHKKKVTHVALNPCC 262 (435)
T ss_dssp -SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-CCCSBCCSSCEEEEEECTTC
T ss_pred -CCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-eEEEecccceEEeeeecCCC
Confidence 489999999987654333333 33457889999999999999999999999987543 3333322 23345666654
Q ss_pred -eEE-EEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCC-
Q 020021 174 -LVF-AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS- 250 (332)
Q Consensus 174 -~~~-~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~- 250 (332)
.++ +++.|+.|++||++...... ......+|...|++++|+|||++|++++.||.|++||+.++.....+..+...
T Consensus 263 ~~~~~s~s~d~~v~iwd~~~~~~~~-~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~ 341 (435)
T 4e54_B 263 DWFLATASVDQTVKIWDLRQVRGKA-SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRH 341 (435)
T ss_dssp SSEEEEEETTSBCCEEETTTCCSSS-CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCC
T ss_pred ceEEEEecCcceeeEEecccccccc-eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccc
Confidence 344 55678999999998654321 11222356678999999999999999999999999999988766555432111
Q ss_pred --CCcceEEEECCCCCEEEEEc------------CCCcEEEEECCCCceEEEec-CCCCCCceE-EeCCCeeEEEeccce
Q 020021 251 --RNSTLEASFSPEGMFVISGS------------GDGSVYAWSVRSGKEVASWM-SFDTEPPVI-KWTPGSLMFVTGSSE 314 (332)
Q Consensus 251 --~~~~~~v~~spdg~~l~sgs------------~Dg~i~vWd~~~~~~~~~~~-~~~~~v~~l-~~sp~~~~l~t~~~d 314 (332)
...+....|+|++.++++++ .+++|++||..+++.+..+. .|...|.++ +|+|++++|++|+++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~ 421 (435)
T 4e54_B 342 FQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGY 421 (435)
T ss_dssp CSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSS
T ss_pred cccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCC
Confidence 11233456777777666654 34689999999999887764 677888887 699999999998765
Q ss_pred -EEEeccccccc
Q 020021 315 -LSFWIPDLSKL 325 (332)
Q Consensus 315 -~~~w~~~~~~~ 325 (332)
+++|+++..+.
T Consensus 422 ~i~iW~~~~gk~ 433 (435)
T 4e54_B 422 HILIWSQQEART 433 (435)
T ss_dssp EEEECCCC----
T ss_pred cEEEEECCcCee
Confidence 88898876554
No 37
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.9e-37 Score=304.06 Aligned_cols=288 Identities=17% Similarity=0.242 Sum_probs=245.8
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCcee
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v 103 (332)
++..++|.+|.+.|.+++|+|++++|++++.|++|+|||+.+++++..+..|...|..++|+|++..+++++. |+.|
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i 79 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD---DFRI 79 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET---TSEE
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC---CCeE
Confidence 5667889999999999999999999999999999999999999999999999999999999999999998865 7899
Q ss_pred EEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCc-eEEEEEEecC--ceeEEEcC-CC-eEEEE
Q 020021 104 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE-KCQGLLRVQG--RPAAAYDD-QG-LVFAV 178 (332)
Q Consensus 104 ~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~-~~~~~~~~~~--~~~~~~~~-~~-~~~~~ 178 (332)
++||+.+++.+..+.+|.+.|++++|+|++++|++++.||+|++||++++ .+...+..+. .....+++ ++ .++++
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999876 4444544332 34566776 55 45555
Q ss_pred EeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcC--CCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceE
Q 020021 179 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 256 (332)
Q Consensus 179 ~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~--dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
+.|+.|++||++.... .. .....+...+..++|+| ++.++++++.||.|++||..+++.+..+. .|...+..
T Consensus 160 ~~dg~v~vwd~~~~~~--~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~~~~v~~ 233 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTP--NF-TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE---GHMSNVSF 233 (814)
T ss_dssp ETTSEEEEEETTCSSC--SE-EEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE---CCSSCEEE
T ss_pred eCCCeEEEEECCCCcc--ee-EEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc---CCCCCEEE
Confidence 5689999999875432 11 12223346789999999 99999999999999999999999887776 45678889
Q ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCee--EEEeccce-EEEecc
Q 020021 257 ASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL--MFVTGSSE-LSFWIP 320 (332)
Q Consensus 257 v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~--~l~t~~~d-~~~w~~ 320 (332)
++|+|++++|++++.||+|++||+.+++.+..+..|...+.+++|+|++. ++++++.+ +.+|..
T Consensus 234 ~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (814)
T 3mkq_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (814)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEEC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEc
Confidence 99999999999999999999999999999999999999999999999986 45555543 666654
No 38
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.5e-37 Score=279.35 Aligned_cols=284 Identities=9% Similarity=0.056 Sum_probs=215.8
Q ss_pred CCcEEEEEECCCCCEEEEEeCCC-------cEEEEEcCCCeee----------EEeeecccceeEEEEccCCCEEEEecC
Q 020021 34 NGRISSMDFHKSSSYLVTASDDE-------SIRLYDVTAATCL----------KTINSKKYGVDLVCFTSHPTTVIYSSK 96 (332)
Q Consensus 34 ~~~I~~i~~s~dg~~l~tgs~D~-------tv~iwd~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~~~~~s~ 96 (332)
..||++++|+||+++|++||.|. .|++|++...... ..+..+...+.++ ++++..++++..
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~--~~~~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAI--DASKGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEE--EEETTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEE--EeCCCEEEEEEC
Confidence 46899999999999999998765 4999999765321 1234455556554 455666666543
Q ss_pred C--------CCCceeEEEEccCCceEE----E-----eecccccEEEEEecCCCCeEE--EeeCCCcEEEEeCCCceEEE
Q 020021 97 N--------GWDESLRLLSLHDNKYLR----Y-----FKGHHDRVVSLSLCSSKDCFI--SGSLDRTVLLWDQRAEKCQG 157 (332)
Q Consensus 97 ~--------g~d~~v~v~d~~~~~~~~----~-----~~~h~~~V~~v~~~~~~~~l~--s~s~Dg~i~iWd~~~~~~~~ 157 (332)
. +.|+++|+|++....... . ...+...+..++|+|||++++ |++.|++|++||++++++..
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 2 347889999987654221 1 123556799999999999876 55689999999999998887
Q ss_pred EEEecC-ceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCC----eEEE
Q 020021 158 LLRVQG-RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG----HIHV 232 (332)
Q Consensus 158 ~~~~~~-~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg----~i~i 232 (332)
.+.... .....+++++.+++.+.++.+++|+..... ........++...+.+++|+|||+++++++.++ .++.
T Consensus 172 ~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 172 EIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGS--CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCC--EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred EeCCCCceEEEEEccCCceEEeccceeEEEEEeccCc--ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 775433 346788999999888888888888876432 111222334556789999999999999998887 6888
Q ss_pred EEccCCeEeEE-eeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe-cCCCCCCceEEeCCCeeEEEe
Q 020021 233 LDSFRGTLLST-YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW-MSFDTEPPVIKWTPGSLMFVT 310 (332)
Q Consensus 233 ~d~~~~~~~~~-~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~-~~~~~~v~~l~~sp~~~~l~t 310 (332)
||...+..... ......+...+.+++|||||++||+|+.|++|+|||+.+++++..+ .+|..+|++|+||||+++|+|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEE
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEE
Confidence 99876654211 1111245678899999999999999999999999999999998875 689999999999999999999
Q ss_pred ccce--EEEeccc
Q 020021 311 GSSE--LSFWIPD 321 (332)
Q Consensus 311 ~~~d--~~~w~~~ 321 (332)
+|.| +++|+..
T Consensus 330 ~S~D~tvrvw~ip 342 (365)
T 4h5i_A 330 VSAANTIHIIKLP 342 (365)
T ss_dssp EETTSEEEEEECC
T ss_pred EeCCCeEEEEEcC
Confidence 9988 8888753
No 39
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=286.33 Aligned_cols=284 Identities=17% Similarity=0.277 Sum_probs=216.4
Q ss_pred cCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCe-----------eeEEeeecc------------cceeEEEEccCC
Q 020021 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT-----------CLKTINSKK------------YGVDLVCFTSHP 88 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 88 (332)
.|.++|++++|+|+|++||+|+.|++|+|||+.+++ +...+.+|. ..|..++|++++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 468999999999999999999999999999999877 577888887 779999999998
Q ss_pred --CEEEEecCCCCCceeEEEEccCCceE---------------------------------------EE-eecccccEEE
Q 020021 89 --TTVIYSSKNGWDESLRLLSLHDNKYL---------------------------------------RY-FKGHHDRVVS 126 (332)
Q Consensus 89 --~~~~~~s~~g~d~~v~v~d~~~~~~~---------------------------------------~~-~~~h~~~V~~ 126 (332)
..+++++. |++|++||+.++... +. +.+|...|.+
T Consensus 106 ~~~~l~s~s~---d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 106 NAAQFLLSTN---DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp SSSEEEEEEC---SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CcceEEEeCC---CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 67777754 889999999764432 12 4689999999
Q ss_pred EEecCCCCeEEEeeCCCcEEEEeCCC-ceEEEEEE-----e----cCceeEEEcCCC--eEEEEEeCCEEEEEECccCCC
Q 020021 127 LSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLR-----V----QGRPAAAYDDQG--LVFAVAFGGYIRMFDARKYEK 194 (332)
Q Consensus 127 v~~~~~~~~l~s~s~Dg~i~iWd~~~-~~~~~~~~-----~----~~~~~~~~~~~~--~~~~~~~~~~i~vwd~~~~~~ 194 (332)
++|+|++++|+++ .|++|++||++. +++...+. . .......+++++ .+++++.|+.|++||++....
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 9999999999998 799999999984 44443321 1 113456777765 455566789999999987543
Q ss_pred CCeeEEEecCCCC------------CceeEEEcCCCCEEEEEcCCCeEEEEEccC-CeEeEEeeecCCCCC---------
Q 020021 195 GPFDIFSVGGDIS------------DANVVKFSNDGRLMLLTTMEGHIHVLDSFR-GTLLSTYNVKPVSRN--------- 252 (332)
Q Consensus 195 ~~~~~~~~~~~~~------------~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~--------- 252 (332)
.........++.. .+.+++|+|+|+++++++. +.|++||+.+ ++.+..+..+.....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND 340 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence 1111122233333 7899999999999999999 9999999987 777766653321111
Q ss_pred c---ceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe--------------------------------cCCCCCCc
Q 020021 253 S---TLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW--------------------------------MSFDTEPP 297 (332)
Q Consensus 253 ~---~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~--------------------------------~~~~~~v~ 297 (332)
. +..++|+|++++|++|+.||.|++||+.+++.+... ..+...+.
T Consensus 341 ~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 420 (447)
T 3dw8_B 341 CIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL 420 (447)
T ss_dssp GGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred ccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence 1 224899999999999999999999999988765311 13456788
Q ss_pred eEEeCCCeeEEEeccce-EEEecc
Q 020021 298 VIKWTPGSLMFVTGSSE-LSFWIP 320 (332)
Q Consensus 298 ~l~~sp~~~~l~t~~~d-~~~w~~ 320 (332)
+++|+|++.+|++++.+ +.+|.-
T Consensus 421 ~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 421 HTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp EEEECSSSSEEEEECSSCEEEEEC
T ss_pred EEEECCCCCEEEEEecceeeeecc
Confidence 99999999999998776 777753
No 40
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.3e-37 Score=277.72 Aligned_cols=284 Identities=13% Similarity=0.219 Sum_probs=226.2
Q ss_pred EeccCCCcEEEEEECCC----CCEEEEEeCCCcEEEEEcCCCeeeEEeeec-----ccceeEEEEccC----CCEEEEec
Q 020021 29 SFRDYNGRISSMDFHKS----SSYLVTASDDESIRLYDVTAATCLKTINSK-----KYGVDLVCFTSH----PTTVIYSS 95 (332)
Q Consensus 29 ~l~~h~~~I~~i~~s~d----g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~----~~~~~~~s 95 (332)
.+.+|+++|++++|+|+ ..++++++.|+.|++||+.+++.+..+..+ ...+..++|+++ +..+++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 456777777779999999988887777654 356899999998 45677665
Q ss_pred CCCCCceeEEEEccCCceEEEeecccccEEEEEecC-CCCeEEEeeCCCcEEEEeCCCceEEEEEE---ec--CceeEEE
Q 020021 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLR---VQ--GRPAAAY 169 (332)
Q Consensus 96 ~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~---~~--~~~~~~~ 169 (332)
. |+.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||+|++||++++++...+. .+ ......+
T Consensus 93 ~---dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 169 (366)
T 3k26_A 93 S---RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY 169 (366)
T ss_dssp T---TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEE
T ss_pred C---CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEE
Confidence 4 88999999999999999999999999999999 89999999999999999999988777662 22 2345667
Q ss_pred cCCCe-EEEEEeCCEEEEEECccCCCC------------------------CeeEEEecCCCCCceeEEEcCCCCEEEEE
Q 020021 170 DDQGL-VFAVAFGGYIRMFDARKYEKG------------------------PFDIFSVGGDISDANVVKFSNDGRLMLLT 224 (332)
Q Consensus 170 ~~~~~-~~~~~~~~~i~vwd~~~~~~~------------------------~~~~~~~~~~~~~v~~v~~s~dg~~l~~~ 224 (332)
++++. +++++.|+.|++||++..+.. ........++...+.+++|+ +++++++
T Consensus 170 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~ 247 (366)
T 3k26_A 170 DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSK 247 (366)
T ss_dssp CTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEE
T ss_pred CCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEE
Confidence 77665 555556899999998753210 00011223366789999998 7899999
Q ss_pred cCCCeEEEEEccCCeE--------------eEEeeecCCCCCcceEEEECCC--CCEEEEEcCCCcEEEEECCCCce---
Q 020021 225 TMEGHIHVLDSFRGTL--------------LSTYNVKPVSRNSTLEASFSPE--GMFVISGSGDGSVYAWSVRSGKE--- 285 (332)
Q Consensus 225 ~~dg~i~i~d~~~~~~--------------~~~~~~~~~~~~~~~~v~~spd--g~~l~sgs~Dg~i~vWd~~~~~~--- 285 (332)
+.|+.|++||+.++.. +..+. .+...+..++|+|+ +++|++|+.||.|++||+.+++.
T Consensus 248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 324 (366)
T 3k26_A 248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD---YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKA 324 (366)
T ss_dssp CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE---CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGC
T ss_pred ecCCEEEEEeCCCccccccccccCCcchheecccc---ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccc
Confidence 9999999999887643 44443 45567888999999 99999999999999999998764
Q ss_pred -EEEecCC--CCCCceEEeCCCeeEEEeccce--EEEecc
Q 020021 286 -VASWMSF--DTEPPVIKWTPGSLMFVTGSSE--LSFWIP 320 (332)
Q Consensus 286 -~~~~~~~--~~~v~~l~~sp~~~~l~t~~~d--~~~w~~ 320 (332)
+..+..| ...|.+++|+|++++|++++.| +++|+.
T Consensus 325 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 325 KCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred cceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 3467777 6899999999999999999988 666654
No 41
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3e-37 Score=284.14 Aligned_cols=283 Identities=13% Similarity=0.140 Sum_probs=225.9
Q ss_pred EeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEc
Q 020021 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (332)
Q Consensus 29 ~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~ 108 (332)
.+..| ..+....|+|++++|++|+.|++|++||+.++++...+..|...|..++|+|++..+++++. |++|++||+
T Consensus 93 ~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---d~~i~iwd~ 168 (420)
T 3vl1_A 93 MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ---DMQLKIWSV 168 (420)
T ss_dssp TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET---TSEEEEEET
T ss_pred EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC---CCeEEEEeC
Confidence 34455 44555578999999999999999999999999999888899999999999999998888764 889999999
Q ss_pred cCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC-------------------------
Q 020021 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG------------------------- 163 (332)
Q Consensus 109 ~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~------------------------- 163 (332)
.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++++...+....
T Consensus 169 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 9999999999999999999999999999999999999999999998877765321
Q ss_pred -ceeEEEcCCCeEEE-EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCC-EEEEEcCCCeEEEEEccCCeE
Q 020021 164 -RPAAAYDDQGLVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTL 240 (332)
Q Consensus 164 -~~~~~~~~~~~~~~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~~~~~dg~i~i~d~~~~~~ 240 (332)
.....+++++.+++ ++.++.|++||++... ........+...+.+++|+|+++ ++++++.||.|++||+.+++.
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE---QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTSCEEEEETTTCC---EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred cccceEEcCCCCEEEEEcCCCeEEEEECCCCc---eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 01123346665555 4568999999997643 11222234567899999999999 999999999999999988754
Q ss_pred -eEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCc---------eEEEecCCCCCCceEEeCCCee----
Q 020021 241 -LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK---------EVASWMSFDTEPPVIKWTPGSL---- 306 (332)
Q Consensus 241 -~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~---------~~~~~~~~~~~v~~l~~sp~~~---- 306 (332)
+..+.. .+...+..+ ++|++++|++++.||+|++|++.+.. ....+..|...+.+++|+|++.
T Consensus 326 ~~~~~~~--~~~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~ 402 (420)
T 3vl1_A 326 PVGEFLI--NEGTPINNV-YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGE 402 (420)
T ss_dssp CSEEEEE--STTSCEEEE-EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCE
T ss_pred chhhhhc--cCCCCceEE-EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcce
Confidence 555543 244555555 55788999999999999999997732 2234567888999999999988
Q ss_pred EEEeccce-EEEeccc
Q 020021 307 MFVTGSSE-LSFWIPD 321 (332)
Q Consensus 307 ~l~t~~~d-~~~w~~~ 321 (332)
++++|+.+ +.+|..+
T Consensus 403 l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 403 VLEVGKNNFCALYNLS 418 (420)
T ss_dssp EEEEETTTEEEEEESC
T ss_pred EEEEcCCceEEEEecc
Confidence 55666554 8888764
No 42
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=7.4e-37 Score=294.33 Aligned_cols=300 Identities=16% Similarity=0.191 Sum_probs=240.9
Q ss_pred ceeEecHHHHhcccceeEeccCCCcEEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeeeEEeeeccc---ceeEEEEccC
Q 020021 12 VSLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKY---GVDLVCFTSH 87 (332)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~-~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~ 87 (332)
..+.+++ ..+....+.+|.+.|.+++|+|+++ ++++++.|++|++||+.+++++..+..|.. .+..++|+|+
T Consensus 142 ~~v~~~d----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 142 GVFISWD----SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPD 217 (615)
T ss_dssp EEEEETT----TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECST
T ss_pred cEEEEEE----CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCC
Confidence 5666666 3456778999999999999999998 899999999999999999999999999988 8999999999
Q ss_pred -CCEEEEecCCCCCceeEEEEccCCceEEEe-e---cccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec
Q 020021 88 -PTTVIYSSKNGWDESLRLLSLHDNKYLRYF-K---GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ 162 (332)
Q Consensus 88 -~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~-~---~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~ 162 (332)
+..+++++. |+.|++||+.+++.+..+ . +|...|.+++|+ ++++|++++.|+.|++||++++++...+..+
T Consensus 218 ~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 218 SGEFVITVGS---DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp TCCEEEEEET---TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCEEEEEeC---CCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 888888764 789999999999999998 6 899999999999 9999999999999999999988766555433
Q ss_pred C------ceeEEEc------------------------------------------------------------------
Q 020021 163 G------RPAAAYD------------------------------------------------------------------ 170 (332)
Q Consensus 163 ~------~~~~~~~------------------------------------------------------------------ 170 (332)
. .....+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~ 373 (615)
T 1pgu_A 294 KQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSN 373 (615)
T ss_dssp TTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCS
T ss_pred CCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccC
Confidence 1 0001111
Q ss_pred --------CCCeEEEEEeCCEEEEEECccCC-------------------------------------------------
Q 020021 171 --------DQGLVFAVAFGGYIRMFDARKYE------------------------------------------------- 193 (332)
Q Consensus 171 --------~~~~~~~~~~~~~i~vwd~~~~~------------------------------------------------- 193 (332)
+...+++++.++.+++||++...
T Consensus 374 ~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (615)
T 1pgu_A 374 LIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVS 453 (615)
T ss_dssp CEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred ceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEE
Confidence 12233333344444444433210
Q ss_pred ------------CCCeeE----------EEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCC
Q 020021 194 ------------KGPFDI----------FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 251 (332)
Q Consensus 194 ------------~~~~~~----------~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 251 (332)
.+.+.+ ....++...+.+++|+|+|+++++++.||.|++||+.+++.+..+.. .|.
T Consensus 454 ~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~h~ 531 (615)
T 1pgu_A 454 LSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWA--FRT 531 (615)
T ss_dssp ECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSC--CCS
T ss_pred EcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeec--CCC
Confidence 011111 22234556789999999999999999999999999999998776542 267
Q ss_pred CcceEEEECC----------CCCEEEEEcCCCcEEEEECCCC-ceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEe
Q 020021 252 NSTLEASFSP----------EGMFVISGSGDGSVYAWSVRSG-KEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 318 (332)
Q Consensus 252 ~~~~~v~~sp----------dg~~l~sgs~Dg~i~vWd~~~~-~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w 318 (332)
..+.+++|+| ++++||+|+.||+|++||+.++ +.+..+..|...|++++|+|+++ |++++.| +++|
T Consensus 532 ~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw 610 (615)
T 1pgu_A 532 SKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRW 610 (615)
T ss_dssp SCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEE
T ss_pred CceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEE
Confidence 8899999999 9999999999999999999987 77888999999999999999999 9999887 8888
Q ss_pred cccc
Q 020021 319 IPDL 322 (332)
Q Consensus 319 ~~~~ 322 (332)
+.+.
T Consensus 611 ~~~~ 614 (615)
T 1pgu_A 611 NVVL 614 (615)
T ss_dssp EEC-
T ss_pred eeec
Confidence 7654
No 43
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.5e-37 Score=272.02 Aligned_cols=249 Identities=17% Similarity=0.279 Sum_probs=205.7
Q ss_pred cceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeE
Q 020021 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (332)
Q Consensus 25 ~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~ 104 (332)
...+.|++|...|.+++|+|++++|+||+.|++|+|||+.++++++.+.+|...|..++|++++..+++++. |++|+
T Consensus 56 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---D~~i~ 132 (319)
T 3frx_A 56 VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR---DKTIK 132 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET---TSCEE
T ss_pred ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC---CCeEE
Confidence 346789999999999999999999999999999999999999999999999999999999999999988864 88999
Q ss_pred EEEccCCceEEEeecccccEEEEEecCC------CCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCeEE
Q 020021 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSS------KDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVF 176 (332)
Q Consensus 105 v~d~~~~~~~~~~~~h~~~V~~v~~~~~------~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 176 (332)
+||+. ++++..+.+|...|.++.|+|. +..+++++.|++|++||+++.++...+..+. .....+++++.++
T Consensus 133 vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l 211 (319)
T 3frx_A 133 VWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLI 211 (319)
T ss_dssp EEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEE
T ss_pred EEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEE
Confidence 99996 4678889999999999999985 4489999999999999999887766654432 3456777877655
Q ss_pred E-EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeec-----CCC
Q 020021 177 A-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK-----PVS 250 (332)
Q Consensus 177 ~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~ 250 (332)
+ ++.|+.|++||++..+ ....+.. ...+.+++|+|++.++++++.+ .+++|++..+..+..+... ..+
T Consensus 212 ~s~~~dg~i~iwd~~~~~----~~~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~ 285 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAKK----AMYTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAA 285 (319)
T ss_dssp EEEETTCEEEEEETTTTE----EEEEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGG
T ss_pred EEEeCCCeEEEEECCCCc----EEEEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCc
Confidence 4 5568999999997642 1222222 3578999999999998887755 5999999887766655422 112
Q ss_pred CCcceEEEECCCCCEEEEEcCCCcEEEEECCCC
Q 020021 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283 (332)
Q Consensus 251 ~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~ 283 (332)
...+.+++|+|||++|++|+.||+|+|||+.++
T Consensus 286 ~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 286 EPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred CcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 456778999999999999999999999998764
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.2e-37 Score=278.08 Aligned_cols=286 Identities=14% Similarity=0.154 Sum_probs=231.1
Q ss_pred EeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCe--eeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEE
Q 020021 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (332)
Q Consensus 29 ~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~ 106 (332)
.+..|.++|.+++|+|++++|++++.|++|++||+.+++ ++..+..|...|..++|++++..+++++. |+.|++|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---dg~i~vw 79 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT---DRNAYVW 79 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET---TSCEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC---CCeEEEE
Confidence 356799999999999999999999999999999999987 88899999999999999999999988764 7899999
Q ss_pred EccCCceEE--EeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceE---EEEEEe---cCceeEEEcCCCeEEE-
Q 020021 107 SLHDNKYLR--YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC---QGLLRV---QGRPAAAYDDQGLVFA- 177 (332)
Q Consensus 107 d~~~~~~~~--~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~- 177 (332)
|+.+++... .+.+|...|.+++|+|++++|++++.|+.|++||++.+.. ...+.. .......+++++.+++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 999887544 3477999999999999999999999999999999887652 222211 1234566777765554
Q ss_pred EEeCCEEEEEECccCC--------------CCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEE
Q 020021 178 VAFGGYIRMFDARKYE--------------KGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLST 243 (332)
Q Consensus 178 ~~~~~~i~vwd~~~~~--------------~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~ 243 (332)
++.++.|++||++... ..........++...+.+++|+|+++++++++.|+.|++||+.+++.+..
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVAT 239 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEE
Confidence 5568999999975211 01112334446667899999999999999999999999999999998887
Q ss_pred eeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCC--Cce--------------------------------E---
Q 020021 244 YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS--GKE--------------------------------V--- 286 (332)
Q Consensus 244 ~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~--~~~--------------------------------~--- 286 (332)
+. .+...+..++|+|++++|++| .|+.|++|++.+ ++. .
T Consensus 240 ~~---~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (372)
T 1k8k_C 240 LA---SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSA 315 (372)
T ss_dssp EE---CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC------
T ss_pred Ec---cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCc
Confidence 76 455678899999999999988 899999999977 421 0
Q ss_pred ---EEe-cCCCCCCceEEeC-CCe---eEEEeccce--EEEeccc
Q 020021 287 ---ASW-MSFDTEPPVIKWT-PGS---LMFVTGSSE--LSFWIPD 321 (332)
Q Consensus 287 ---~~~-~~~~~~v~~l~~s-p~~---~~l~t~~~d--~~~w~~~ 321 (332)
..+ ..|...|++++|+ +++ .+|+|++.| +++|+..
T Consensus 316 ~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 316 AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp ---CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred cccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 222 4899999999966 676 899999988 7777653
No 45
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.7e-36 Score=311.48 Aligned_cols=295 Identities=14% Similarity=0.231 Sum_probs=240.5
Q ss_pred ceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEE
Q 020021 26 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (332)
Q Consensus 26 ~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v 105 (332)
....+.+|.+.|++++|+|+|++|++|+.|++|+|||+.+++++.++.+|...|..++|+|++..+++++. |++|++
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---d~~v~v 683 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA---DKKVKI 683 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEE
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC---CCeEEE
Confidence 34568899999999999999999999999999999999999999999999999999999999999988864 889999
Q ss_pred EEccCCceEEEeecccccEEEEEecC--CCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCe-EEEEEe
Q 020021 106 LSLHDNKYLRYFKGHHDRVVSLSLCS--SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGL-VFAVAF 180 (332)
Q Consensus 106 ~d~~~~~~~~~~~~h~~~V~~v~~~~--~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~ 180 (332)
||+.+++.+..+.+|...|.+++|+| ++..+++++.|++|++||++++++...+..+. .....+++++. +++++.
T Consensus 684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEES
T ss_pred EECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEEC
Confidence 99999999999999999999999999 45589999999999999999998877765433 34566777665 555667
Q ss_pred CCEEEEEECccCCCC---------------------------------------------------CeeEEEecCCCCCc
Q 020021 181 GGYIRMFDARKYEKG---------------------------------------------------PFDIFSVGGDISDA 209 (332)
Q Consensus 181 ~~~i~vwd~~~~~~~---------------------------------------------------~~~~~~~~~~~~~v 209 (332)
|+.|++||++..... ........++...+
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 899999998653110 00000112556788
Q ss_pred eeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEEC---------
Q 020021 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSV--------- 280 (332)
Q Consensus 210 ~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~--------- 280 (332)
.+++|+|+++++++++.+|.|++||..++..+..+. .|...+..++|+|+|++|++++.||+|++||+
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~ 920 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR---GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAI 920 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC---CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSS
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC---CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeee
Confidence 999999999999999999999999999988877665 45567777788888887777777777777764
Q ss_pred ----------------------------------------------------------------------CCCceEEEec
Q 020021 281 ----------------------------------------------------------------------RSGKEVASWM 290 (332)
Q Consensus 281 ----------------------------------------------------------------------~~~~~~~~~~ 290 (332)
.+++.+..+.
T Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~ 1000 (1249)
T 3sfz_A 921 VLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGV 1000 (1249)
T ss_dssp SEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECC
T ss_pred cccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecc
Confidence 3334445556
Q ss_pred CCCCCCceEEeCCCeeEEEeccce--EEEecccccccc
Q 020021 291 SFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDLSKLG 326 (332)
Q Consensus 291 ~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~~~~~ 326 (332)
.|...|.+++|+|+++++++++.| +++|+.....+.
T Consensus 1001 ~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV 1038 (1249)
T ss_dssp CCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceE
Confidence 788899999999999999998877 888887654443
No 46
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-36 Score=268.97 Aligned_cols=250 Identities=14% Similarity=0.129 Sum_probs=211.8
Q ss_pred eeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEE
Q 020021 67 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVL 146 (332)
Q Consensus 67 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~ 146 (332)
+..+++.+|...|..++|+|+++.+++++. |++|++||+++++.+..+.+|..+|.++.|+|++++|++|+.|++|+
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~---dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLY---SGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEET---TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcC---CCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 456778899999999999999999998864 88999999999999999999999999999999999999999999999
Q ss_pred EEeCCCceEEEEEEecC--ceeEEEcCCCe-EEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcC-CCCEEE
Q 020021 147 LWDQRAEKCQGLLRVQG--RPAAAYDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN-DGRLML 222 (332)
Q Consensus 147 iWd~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~ 222 (332)
+||++++++...+..+. .....+++++. +++++.|++|++||++... .......+|...+.+++|+| ++.+++
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~---~~~~~~~~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW---ALEQTFEGHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT---EEEEEECCCCSCEEEEEECTTCTTEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc---chhhhhcccCCcEEEEEECCCCCCEEE
Confidence 99999998877776543 34567777665 5556678999999987532 22234557778899999999 679999
Q ss_pred EEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECC--CCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEE
Q 020021 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP--EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIK 300 (332)
Q Consensus 223 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~sp--dg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~ 300 (332)
+++.|++|++||+.++.....+. ..+...+..++|+| ++++|++|+.|++|++||+.+++++..+..|...|.+++
T Consensus 158 sgs~D~~v~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~ 235 (304)
T 2ynn_A 158 SGCLDRTVKVWSLGQSTPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV 235 (304)
T ss_dssp EEETTSEEEEEETTCSSCSEEEE--CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEeCCCeEEEEECCCCCccceec--cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEE
Confidence 99999999999998776554443 23445677788876 788999999999999999999999999999999999999
Q ss_pred eCCCeeEEEeccce--EEEecccccc
Q 020021 301 WTPGSLMFVTGSSE--LSFWIPDLSK 324 (332)
Q Consensus 301 ~sp~~~~l~t~~~d--~~~w~~~~~~ 324 (332)
|+|++.+|++++.| +++|+....+
T Consensus 236 ~~p~~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 236 FHPTLPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 99999999999987 8899875533
No 47
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-37 Score=278.11 Aligned_cols=280 Identities=13% Similarity=0.132 Sum_probs=228.9
Q ss_pred eeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCe---eeEEeeecccceeEEEEccCCC-EEEEecCCCCCce
Q 020021 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT---CLKTINSKKYGVDLVCFTSHPT-TVIYSSKNGWDES 102 (332)
Q Consensus 27 ~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~~~~~s~~g~d~~ 102 (332)
.....+|.+.|++++|+|++++|++++.|++|+|||+.+++ ....+..|...|..++|++++. .+++++. |+.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~ 80 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV---QGE 80 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET---TSC
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC---CCe
Confidence 33456899999999999999999999999999999998776 3455567888999999999999 8888764 789
Q ss_pred eEEEEc-cCCceEEEeec--ccccEEEEEecCCCCeEEEeeCCCcEEEEeCCC---------ceEEEEEEecC-ceeEEE
Q 020021 103 LRLLSL-HDNKYLRYFKG--HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA---------EKCQGLLRVQG-RPAAAY 169 (332)
Q Consensus 103 v~v~d~-~~~~~~~~~~~--h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~---------~~~~~~~~~~~-~~~~~~ 169 (332)
|++||+ .+++. ..+.+ |...|.+++|+| ++.|++++.|+.|++||+++ +++...+.... .....+
T Consensus 81 i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 158 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158 (342)
T ss_dssp EEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred EEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEe
Confidence 999999 87754 77888 999999999999 99999999999999999876 55443333222 234455
Q ss_pred cCCCeEEEEEeCCEEEEEECcc-CCCCCeeEEEecCCCCCceeEEEcC-CCCEEEEEcCCCeEEEEEccCC------eEe
Q 020021 170 DDQGLVFAVAFGGYIRMFDARK-YEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRG------TLL 241 (332)
Q Consensus 170 ~~~~~~~~~~~~~~i~vwd~~~-~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~~~~~dg~i~i~d~~~~------~~~ 241 (332)
.++. +++++.++.|++||++. .... .. .....+...+.+++|+| +++++++++.||.|++||.... +..
T Consensus 159 ~~~~-l~~~~~d~~i~i~d~~~~~~~~-~~-~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 159 NSSR-LIVGMNNSQVQWFRLPLCEDDN-GT-IEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp CSSE-EEEEESTTEEEEEESSCCTTCC-CE-EEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred cCCc-EEEEeCCCeEEEEECCcccccc-ce-eeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc
Confidence 5555 77777889999999986 4321 21 22234556789999999 9999999999999999999876 555
Q ss_pred EEeeecCC------CCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCC-CCCCceEEeCCCeeEEEeccce
Q 020021 242 STYNVKPV------SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF-DTEPPVIKWTPGSLMFVTGSSE 314 (332)
Q Consensus 242 ~~~~~~~~------~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~-~~~v~~l~~sp~~~~l~t~~~d 314 (332)
..+..+.. +...+.+++|+|++++|++|+.||.|++||+.+++.+..+..| ...|.+++ |++++|++++.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSD 313 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEEC
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecC
Confidence 55553221 2347889999999999999999999999999999999999988 99999999 999999999988
Q ss_pred EE
Q 020021 315 LS 316 (332)
Q Consensus 315 ~~ 316 (332)
..
T Consensus 314 g~ 315 (342)
T 1yfq_A 314 DT 315 (342)
T ss_dssp TH
T ss_pred Cc
Confidence 54
No 48
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-37 Score=285.40 Aligned_cols=289 Identities=14% Similarity=0.194 Sum_probs=226.3
Q ss_pred cccceeEe-ccCCCcEEEEEECC-CCCEEEEEeCCCcEEEEEcCC---Cee---eEEeeecccceeEEEEccCCCEEEEe
Q 020021 23 SMEVGMSF-RDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTA---ATC---LKTINSKKYGVDLVCFTSHPTTVIYS 94 (332)
Q Consensus 23 ~~~~~~~l-~~h~~~I~~i~~s~-dg~~l~tgs~D~tv~iwd~~~---~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~ 94 (332)
..++...| .+|+++|++++|+| ++++|+||+.|++|+|||+.+ +.+ ...+ .|...|..++|++++..++++
T Consensus 51 ~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~ 129 (437)
T 3gre_A 51 RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVS 129 (437)
T ss_dssp CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEE
T ss_pred cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEE
Confidence 35667788 89999999999999 999999999999999999976 432 2333 478889999999999999888
Q ss_pred cCCCCCceeEEEEcc---CCceEEEeecc------------cccEEEEE--ecCCCCeEEEeeCCCcEEEEeCCCceEEE
Q 020021 95 SKNGWDESLRLLSLH---DNKYLRYFKGH------------HDRVVSLS--LCSSKDCFISGSLDRTVLLWDQRAEKCQG 157 (332)
Q Consensus 95 s~~g~d~~v~v~d~~---~~~~~~~~~~h------------~~~V~~v~--~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~ 157 (332)
+. |++|++||+. .++.+..+.+| ...+.++. +++++.+|++++.|++|++||++++++..
T Consensus 130 s~---dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 206 (437)
T 3gre_A 130 SK---DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQ 206 (437)
T ss_dssp ET---TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEE
T ss_pred eC---CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeE
Confidence 65 8899999994 66666555544 34455554 44678999999999999999999999888
Q ss_pred EEEec----CceeEEEcCCCeEEE-EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeE----EEcCCCCEEEEEcCCC
Q 020021 158 LLRVQ----GRPAAAYDDQGLVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVV----KFSNDGRLMLLTTMEG 228 (332)
Q Consensus 158 ~~~~~----~~~~~~~~~~~~~~~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v----~~s~dg~~l~~~~~dg 228 (332)
.+..+ ......+++++.+++ ++.|+.|++||++... ....+.. .+...+.++ .|+|++.++++++.||
T Consensus 207 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~-~~~~~v~~~~~~~~~s~~~~~l~s~~~dg 283 (437)
T 3gre_A 207 IIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV--LIRSWSF-GDHAPITHVEVCQFYGKNSVIVVGGSSKT 283 (437)
T ss_dssp EEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE--EEEEEBC-TTCEEEEEEEECTTTCTTEEEEEEESTTE
T ss_pred EEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc--EEEEEec-CCCCceEEEEeccccCCCccEEEEEcCCC
Confidence 77652 234567777776554 5568999999998632 1112221 344578888 4556788999999999
Q ss_pred eEEEEEccCCeEeEEeeecC-----------------------CCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCce
Q 020021 229 HIHVLDSFRGTLLSTYNVKP-----------------------VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE 285 (332)
Q Consensus 229 ~i~i~d~~~~~~~~~~~~~~-----------------------~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~ 285 (332)
.|++||+.+++.+..+..+. .+...+.+++|+ ++++|++|+.||.|++||+.+++.
T Consensus 284 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 284 FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGG
T ss_pred cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCccc
Confidence 99999999999887775321 144567889999 889999999999999999999887
Q ss_pred EEEecC-------------------------------------CCCCCceEEeCCC--eeEEEeccce--EEEec
Q 020021 286 VASWMS-------------------------------------FDTEPPVIKWTPG--SLMFVTGSSE--LSFWI 319 (332)
Q Consensus 286 ~~~~~~-------------------------------------~~~~v~~l~~sp~--~~~l~t~~~d--~~~w~ 319 (332)
+..+.. |...|++++|+++ +.+|++|+.| +++|.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 363 SKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 766654 7889999999998 8899999988 77773
No 49
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-36 Score=275.06 Aligned_cols=256 Identities=21% Similarity=0.315 Sum_probs=212.3
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCC------eeeEEeeecccceeEEEEccC
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA------TCLKTINSKKYGVDLVCFTSH 87 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~ 87 (332)
+.+|+- ...+....+..|...|.+++|+|+|.+|++|+.|+++++|++... .....+..|...+..++|+++
T Consensus 88 v~vWd~--~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 165 (354)
T 2pbi_B 88 VIVWDS--FTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNS 165 (354)
T ss_dssp EEEEET--TTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSS
T ss_pred EEEEEC--CCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCC
Confidence 556652 234556678889999999999999999999999999999998643 345667788889999999999
Q ss_pred CCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecC--CCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--
Q 020021 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS--SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-- 163 (332)
Q Consensus 88 ~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~--~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~-- 163 (332)
+..+++++. |++|++||+++++.+..+.+|...|.+++|+| ++++|++|+.||+|++||++++++...+..+.
T Consensus 166 ~~~l~t~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~ 242 (354)
T 2pbi_B 166 DMQILTASG---DGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESD 242 (354)
T ss_dssp SSEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred CCEEEEEeC---CCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC
Confidence 999988864 88999999999999999999999999999987 46899999999999999999998887775433
Q ss_pred ceeEEEcCCCe-EEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeE
Q 020021 164 RPAAAYDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS 242 (332)
Q Consensus 164 ~~~~~~~~~~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~ 242 (332)
.....+++++. +++++.|++|++||++... ....+........+.+++|+|+|+++++++.|+.|++||+.+++.+.
T Consensus 243 v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 320 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDATCRLYDLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS 320 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE
Confidence 34567777665 4555568999999998642 12222222223467889999999999999999999999999998877
Q ss_pred EeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEE
Q 020021 243 TYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWS 279 (332)
Q Consensus 243 ~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd 279 (332)
.+. .|...+.+++|+|||++|++|+.||+|+||+
T Consensus 321 ~l~---~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 321 ILF---GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEC---CCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEE---CCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 665 5678899999999999999999999999996
No 50
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.7e-36 Score=280.87 Aligned_cols=283 Identities=18% Similarity=0.329 Sum_probs=231.2
Q ss_pred ceeEeccCCCcE-EEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeE
Q 020021 26 VGMSFRDYNGRI-SSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (332)
Q Consensus 26 ~~~~l~~h~~~I-~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~ 104 (332)
....|.+|.+.| .++.| ++++|++|+.|++|++||+.+++++..+.+|...|..++|++++ .+++++. |++|+
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~---dg~i~ 186 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST---DRTVR 186 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEET---TSCEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeC---CCCEE
Confidence 456899999885 66666 46899999999999999999999999999999999999999887 6666654 88999
Q ss_pred EEEccCCceEEEeecccccEEEEEec--CCCCeEEEeeCCCcEEEEeCCCceEEE-----------------------EE
Q 020021 105 LLSLHDNKYLRYFKGHHDRVVSLSLC--SSKDCFISGSLDRTVLLWDQRAEKCQG-----------------------LL 159 (332)
Q Consensus 105 v~d~~~~~~~~~~~~h~~~V~~v~~~--~~~~~l~s~s~Dg~i~iWd~~~~~~~~-----------------------~~ 159 (332)
+||+.+++.+..+.+|.+.|.+++|+ +++++|++++.|++|++||++++.... .+
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 99999999999999999999999998 577899999999999999998765321 12
Q ss_pred EecCceeEEEcC-CCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCC
Q 020021 160 RVQGRPAAAYDD-QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG 238 (332)
Q Consensus 160 ~~~~~~~~~~~~-~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~ 238 (332)
..+......+.+ ...+++++.|+.|++||++..+ ......++...+.+++|+|+++++++++.||.|++||+.++
T Consensus 267 ~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 267 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK----CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred cCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc----EEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 112222223333 3456666679999999997532 23445567788999999999999999999999999999999
Q ss_pred eEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce-EEE
Q 020021 239 TLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE-LSF 317 (332)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d-~~~ 317 (332)
+.+..+. .|...+..++|+ +++|++|+.||+|++||+.+++..... .+...+..++|+|+++++++++.. +++
T Consensus 343 ~~~~~~~---~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~dg~i~i 416 (464)
T 3v7d_B 343 ELMYTLQ---GHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGSENQFNI 416 (464)
T ss_dssp EEEEEEC---CCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEETTEEEE
T ss_pred cEEEEEe---CCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEecCCeEEE
Confidence 9888776 466778888886 589999999999999999987765554 356678889999999999998743 999
Q ss_pred ecccccc
Q 020021 318 WIPDLSK 324 (332)
Q Consensus 318 w~~~~~~ 324 (332)
|+....+
T Consensus 417 wd~~~g~ 423 (464)
T 3v7d_B 417 YNLRSGK 423 (464)
T ss_dssp EETTTCC
T ss_pred EECCCCc
Confidence 9875544
No 51
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.5e-37 Score=279.19 Aligned_cols=252 Identities=16% Similarity=0.229 Sum_probs=196.8
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEE----eeecccceeEEEEccCCCEEEEecCCCC
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT----INSKKYGVDLVCFTSHPTTVIYSSKNGW 99 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~s~~g~ 99 (332)
.++.....+|.+.|.+++|+|++. +++++.|++|+|||+.+++++.. ..+|...|..++|+|++..+++++.
T Consensus 84 ~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~--- 159 (357)
T 4g56_B 84 ESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK--- 159 (357)
T ss_dssp GGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET---
T ss_pred eeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC---
Confidence 344556778999999999999975 55788999999999998876532 3467788999999999999998864
Q ss_pred CceeEEEEccCCceEEEeecccccEEEEEecCCCC-eEEEeeCCCcEEEEeCCCceEEEEEEecC----ceeEEEcCC-C
Q 020021 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQG----RPAAAYDDQ-G 173 (332)
Q Consensus 100 d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~----~~~~~~~~~-~ 173 (332)
|++|++||+.+++.+..+.+|...|++++|+++++ .+++++.|++|++||++++++...+.... .....++++ +
T Consensus 160 dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 160 DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTST
T ss_pred CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhccc
Confidence 88999999999999999999999999999999875 79999999999999999887665443321 234566664 4
Q ss_pred eEEE-EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCC-CEEEEEcCCCeEEEEEccCCeEeEEeeecCCCC
Q 020021 174 LVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 251 (332)
Q Consensus 174 ~~~~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 251 (332)
.+++ ++.|+.|++||++..+. .....++...+.+++|+|++ ++|++++.|++|++||+.+++++..+ .|.
T Consensus 240 ~~la~g~~d~~i~~wd~~~~~~----~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~----~H~ 311 (357)
T 4g56_B 240 DTFACGDETGNVSLVNIKNPDS----AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL----SHR 311 (357)
T ss_dssp TEEEEEESSSCEEEEESSCGGG----CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC----CCS
T ss_pred ceEEEeecccceeEEECCCCcE----eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC----CCC
Confidence 4554 45689999999986432 23345677789999999998 57899999999999999999877654 467
Q ss_pred CcceEEEECC-CCCEEEEEcCCCcEEEEECCCCceEE
Q 020021 252 NSTLEASFSP-EGMFVISGSGDGSVYAWSVRSGKEVA 287 (332)
Q Consensus 252 ~~~~~v~~sp-dg~~l~sgs~Dg~i~vWd~~~~~~~~ 287 (332)
..|.+++|+| |+++|+|||.||+|++|++.+.....
T Consensus 312 ~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~ 348 (357)
T 4g56_B 312 DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTE 348 (357)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSCEEEEECC------
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc
Confidence 8899999999 89999999999999999997654433
No 52
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-36 Score=277.67 Aligned_cols=277 Identities=13% Similarity=0.174 Sum_probs=232.8
Q ss_pred cCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCC
Q 020021 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN 111 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~ 111 (332)
+|.+.|.+++|+|++++|++++.|++|++|| .+++.+..+..|...|..++|++++..+++++. |+.+++||+.++
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~ 181 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDV---ENVTILWNVISG 181 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEET---TCCEEEEETTTT
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEec---CCeEEEEECCCC
Confidence 3789999999999999999999999999999 678888899999999999999999999888764 789999999999
Q ss_pred ceEEEeeccccc---------------EEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCe
Q 020021 112 KYLRYFKGHHDR---------------VVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGL 174 (332)
Q Consensus 112 ~~~~~~~~h~~~---------------V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~ 174 (332)
+.+..+..|... +.++.|++++ .+++++.|+.|++||+++++....+..+. .....+++++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 260 (425)
T 1r5m_A 182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK 260 (425)
T ss_dssp EEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT
T ss_pred cEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC
Confidence 999999888887 9999999875 68999999999999999887766554332 23456667665
Q ss_pred -EEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCc
Q 020021 175 -VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNS 253 (332)
Q Consensus 175 -~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 253 (332)
+++++.++.|++||++..+. . ....++...+..++|+|++ ++++++.|+.|++||+.+++.+..+. .+...
T Consensus 261 ~l~~~~~d~~i~i~d~~~~~~--~--~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~ 332 (425)
T 1r5m_A 261 LLLSASDDGTLRIWHGGNGNS--Q--NCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI---VDGVP 332 (425)
T ss_dssp EEEEEETTSCEEEECSSSBSC--S--EEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE---CTTCC
T ss_pred EEEEEcCCCEEEEEECCCCcc--c--eEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc---cCCcc
Confidence 44555689999999876432 1 2234566789999999999 99999999999999999999887776 35678
Q ss_pred ceEEEECCCCCEEEEEcCCCcEEEEECCCCc--------------------eEEEecCCCC--CCceEEeCCCeeEEEec
Q 020021 254 TLEASFSPEGMFVISGSGDGSVYAWSVRSGK--------------------EVASWMSFDT--EPPVIKWTPGSLMFVTG 311 (332)
Q Consensus 254 ~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~--------------------~~~~~~~~~~--~v~~l~~sp~~~~l~t~ 311 (332)
+..++|+|++++|++++.||.|++||+.+++ .+..+..|.. .|.+++|+|++++|+++
T Consensus 333 i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 412 (425)
T 1r5m_A 333 IFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVA 412 (425)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEE
Confidence 8899999999999999999999999999888 7888888876 89999999999999998
Q ss_pred cce--EEEeccc
Q 020021 312 SSE--LSFWIPD 321 (332)
Q Consensus 312 ~~d--~~~w~~~ 321 (332)
+.| +.+|+.+
T Consensus 413 ~~dg~i~iw~~~ 424 (425)
T 1r5m_A 413 YSLQEGSVVAIP 424 (425)
T ss_dssp ESSSCCEEEECC
T ss_pred ecCceEEEEeec
Confidence 887 7888754
No 53
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-36 Score=269.40 Aligned_cols=254 Identities=15% Similarity=0.200 Sum_probs=190.0
Q ss_pred cceeEe-cc-CCCcEEEEEECCCCCEEEEEeCCCcEEEEEcC-------CCeeeEEeeecccceeEEEEccCCCEEEEec
Q 020021 25 EVGMSF-RD-YNGRISSMDFHKSSSYLVTASDDESIRLYDVT-------AATCLKTINSKKYGVDLVCFTSHPTTVIYSS 95 (332)
Q Consensus 25 ~~~~~l-~~-h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 95 (332)
+....+ .+ |.++|.+++|+|++++|++|+.|++|+|||+. ..+++..+.+|...|..++|+|++..+++++
T Consensus 47 ~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s 126 (330)
T 2hes_X 47 TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS 126 (330)
T ss_dssp EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEE
T ss_pred EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe
Confidence 445556 45 99999999999999999999999999999984 3456778889999999999999999998886
Q ss_pred CCCCCceeEEEEccC----CceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCc--eEEEEEEecC--ceeE
Q 020021 96 KNGWDESLRLLSLHD----NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE--KCQGLLRVQG--RPAA 167 (332)
Q Consensus 96 ~~g~d~~v~v~d~~~----~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~--~~~~~~~~~~--~~~~ 167 (332)
. |++|++||+.. .+++..+.+|...|.+++|+|++++|+|++.|++|++||..++ ++...+..+. ....
T Consensus 127 ~---D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~ 203 (330)
T 2hes_X 127 R---DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSS 203 (330)
T ss_dssp T---TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred C---CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEE
Confidence 4 88999999943 2467789999999999999999999999999999999998765 4444443332 2345
Q ss_pred EEcCC--C-eEEEEEeCCEEEEEECccCCCCC----eeEEEecC-CCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q 020021 168 AYDDQ--G-LVFAVAFGGYIRMFDARKYEKGP----FDIFSVGG-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT 239 (332)
Q Consensus 168 ~~~~~--~-~~~~~~~~~~i~vwd~~~~~~~~----~~~~~~~~-~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~ 239 (332)
.++++ + .+++++.|++|++||++...... .....+.+ |...+.+++|++++ ++++++.||.|++||..+++
T Consensus 204 ~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 204 DFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTE
T ss_pred EecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc
Confidence 66665 4 35566679999999986532111 11122222 66789999999766 78999999999999998774
Q ss_pred EeEEeeecCCCCC-cceEEEECC--CCCEEEEEcCCCcEEEEECCC
Q 020021 240 LLSTYNVKPVSRN-STLEASFSP--EGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 240 ~~~~~~~~~~~~~-~~~~v~~sp--dg~~l~sgs~Dg~i~vWd~~~ 282 (332)
..........|.. .+..++|+| ++++||||+.||+|++||+.+
T Consensus 283 ~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 283 WKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred eEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 2211111123444 788999999 799999999999999999865
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.7e-36 Score=275.54 Aligned_cols=274 Identities=16% Similarity=0.227 Sum_probs=221.9
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEee--ecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~ 113 (332)
.++.|+||++ ++||.| .|++|+|||+.++++++.+. .|...|.+++|++++..+++++. |++|++||+++++.
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~---Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKR 181 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEE
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC---CCeEEEEEcCCCcE
Confidence 4567999975 577665 59999999999999988776 45567999999999999998865 88999999999999
Q ss_pred EEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceE-EEEEEecC--ceeEEEcCCCe-EEEEEeCCEEEEEEC
Q 020021 114 LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC-QGLLRVQG--RPAAAYDDQGL-VFAVAFGGYIRMFDA 189 (332)
Q Consensus 114 ~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~-~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~i~vwd~ 189 (332)
+..+.+|...|.++.++ +..|++|+.|+++++||...... ...+..+. .....+.+.+. +++++.|+.+++||.
T Consensus 182 ~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 182 LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEee
Confidence 99999999999988775 68999999999999999876443 33333322 23445566665 445556899999999
Q ss_pred ccCCCCCeeEEEecCCCCCceeEEEcCCCC-EEEE--EcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEE
Q 020021 190 RKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLL--TTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 266 (332)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l 266 (332)
...+...........+...+.+++|+|++. ++++ ++.|++|++||+.+++.+..+.. ...+..+.|+|+++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~----~~~v~~~~~~~~~~~l 335 (420)
T 4gga_A 260 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA----HSQVCSILWSPHYKEL 335 (420)
T ss_dssp SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC----SSCEEEEEEETTTTEE
T ss_pred ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc----ccceeeeeecCCCCeE
Confidence 865543333334445667899999999765 4444 45799999999999998877752 3467788999999999
Q ss_pred EEEc--CCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEecc
Q 020021 267 ISGS--GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 320 (332)
Q Consensus 267 ~sgs--~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~ 320 (332)
++++ .|+.|+|||+.+++++..+.+|...|++|+|+||+++|+||+.| +++|+.
T Consensus 336 v~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp EEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred EEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 8865 79999999999999999999999999999999999999999988 888875
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.5e-36 Score=270.58 Aligned_cols=262 Identities=10% Similarity=0.173 Sum_probs=214.0
Q ss_pred eEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCC----eeeEEeeecccceeEEEEcc--CCCEEEEecCCCCCc
Q 020021 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWDE 101 (332)
Q Consensus 28 ~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~~~~~s~~g~d~ 101 (332)
..+.+|.+.|++++|+|++++|++|+.|++|++||+.++ +.+..+..|...|..++|++ ++..+++++. |+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~---dg 81 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY---DK 81 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET---TS
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC---CC
Confidence 457899999999999999999999999999999999876 46677888999999999999 5788887764 88
Q ss_pred eeEEEEccCC---------ceEEEeecccccEEEEEecCC--CCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEc
Q 020021 102 SLRLLSLHDN---------KYLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYD 170 (332)
Q Consensus 102 ~v~v~d~~~~---------~~~~~~~~h~~~V~~v~~~~~--~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~ 170 (332)
.|++||+..+ +.+..+.+|...|.+++|+|+ +++|++++.||.|++||++++++...+.....
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~------ 155 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE------ 155 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE------
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc------
Confidence 9999999887 557888999999999999999 99999999999999999987764332221100
Q ss_pred CCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCC---CCEEEEEcCCCeEEEEEccCCeEeEEeeec
Q 020021 171 DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND---GRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247 (332)
Q Consensus 171 ~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d---g~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 247 (332)
+.... .....+...+.+++|+|+ +.++++++.++.+.+|+...++...... .
T Consensus 156 -------------~~~~~-----------~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~ 210 (351)
T 3f3f_A 156 -------------MKVLS-----------IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAK-L 210 (351)
T ss_dssp -------------EESCS-----------CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEE-C
T ss_pred -------------ccccc-----------cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeee-c
Confidence 00000 001134457889999997 9999999999999888877776532222 2
Q ss_pred CCCCCcceEEEECCCC----CEEEEEcCCCcEEEEECCCC----------------------------------------
Q 020021 248 PVSRNSTLEASFSPEG----MFVISGSGDGSVYAWSVRSG---------------------------------------- 283 (332)
Q Consensus 248 ~~~~~~~~~v~~spdg----~~l~sgs~Dg~i~vWd~~~~---------------------------------------- 283 (332)
..|...+.+++|+|++ ++|++|+.||.|++||+.++
T Consensus 211 ~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
T 3f3f_A 211 PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAEL 290 (351)
T ss_dssp CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------
T ss_pred CCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeee
Confidence 2467889999999998 89999999999999999764
Q ss_pred ------ceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEeccccc
Q 020021 284 ------KEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDLS 323 (332)
Q Consensus 284 ------~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~~ 323 (332)
+.+..+..|...|++++|+|++++|++++.| +++|+....
T Consensus 291 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 291 QSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred cccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC
Confidence 5566778899999999999999999999987 888887653
No 56
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=267.40 Aligned_cols=255 Identities=15% Similarity=0.212 Sum_probs=200.3
Q ss_pred eccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCC--eeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEE
Q 020021 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA--TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107 (332)
Q Consensus 30 l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d 107 (332)
+.+|.+.|.+++|+|++++|++|+.|++++|||+.++ +++.++.+|...|..++|+|++..+++++. |++|++||
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~---D~~v~iwd 133 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR---DKSVWVWE 133 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC---CCeEEEEE
Confidence 3789999999999999999999999999999999876 467888999999999999999999998864 88999999
Q ss_pred ccCCc---eEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEE--EEEEec--CceeEEEcCCCeEE-EEE
Q 020021 108 LHDNK---YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ--GLLRVQ--GRPAAAYDDQGLVF-AVA 179 (332)
Q Consensus 108 ~~~~~---~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~--~~~~~~--~~~~~~~~~~~~~~-~~~ 179 (332)
+..+. ++..+.+|...|.+++|+|++++|++++.|++|++||.+.+... ..+..+ ......+++++.++ +++
T Consensus 134 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 134 VDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp ECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEe
Confidence 97753 46678899999999999999999999999999999998877543 233222 23456778877654 455
Q ss_pred eCCEEEEEECccCCCCC-----------eeEEEecC-CCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeE----eE-
Q 020021 180 FGGYIRMFDARKYEKGP-----------FDIFSVGG-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL----LS- 242 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~-----------~~~~~~~~-~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~----~~- 242 (332)
.|++|++||........ .......+ +...+..++|+|++..+++++.|+.|++|+...+.. ..
T Consensus 214 ~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~ 293 (345)
T 3fm0_A 214 DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFS 293 (345)
T ss_dssp TTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEE
T ss_pred CCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEE
Confidence 68999999974322110 01112222 566889999999999999999999999999865421 11
Q ss_pred -EeeecCCCCCcceEEEECCCC-CEEEEEcCCCcEEEEECCCCceEE
Q 020021 243 -TYNVKPVSRNSTLEASFSPEG-MFVISGSGDGSVYAWSVRSGKEVA 287 (332)
Q Consensus 243 -~~~~~~~~~~~~~~v~~spdg-~~l~sgs~Dg~i~vWd~~~~~~~~ 287 (332)
.......|...+.+++|+|++ .+|||||.||+|++|++.+++.+.
T Consensus 294 ~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 294 LTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp EEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-----
T ss_pred EEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcc
Confidence 112233577889999999998 599999999999999998877654
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.7e-38 Score=285.09 Aligned_cols=247 Identities=13% Similarity=0.098 Sum_probs=192.1
Q ss_pred eeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCC--eeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeE
Q 020021 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA--TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (332)
Q Consensus 27 ~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~ 104 (332)
...+..|.++|++++|+|++++|++|+.|++|+|||+.++ +++..+..|...|..++|+|++..+++++. |++|+
T Consensus 4 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---d~~v~ 80 (377)
T 3dwl_C 4 SQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ---DRNAY 80 (377)
T ss_dssp EEEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET---TSSEE
T ss_pred ceeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC---CCeEE
Confidence 3456678889999999999999999999999999999988 788889999999999999999999988864 88999
Q ss_pred EEEccCCc---eEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceE---EEEEEe-c--CceeEEEcCCCe-
Q 020021 105 LLSLHDNK---YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC---QGLLRV-Q--GRPAAAYDDQGL- 174 (332)
Q Consensus 105 v~d~~~~~---~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~---~~~~~~-~--~~~~~~~~~~~~- 174 (332)
+||+.+++ ....+.+|...|.+++|+|++++|++++.|++|++||+++++. ...+.. + ......+++++.
T Consensus 81 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp EC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred EEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 99999877 6778889999999999999999999999999999999988763 334432 1 234567777765
Q ss_pred EEEEEeCCEEEEEECccCCCC------------Ce--eEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeE
Q 020021 175 VFAVAFGGYIRMFDARKYEKG------------PF--DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL 240 (332)
Q Consensus 175 ~~~~~~~~~i~vwd~~~~~~~------------~~--~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~ 240 (332)
+++++.|+.|++||++..... +. ..... ++...+.+++|+|+|+++++++.||.|++||+.+++.
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 445556899999998532100 01 11222 6677899999999999999999999999999998876
Q ss_pred ----eEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECC
Q 020021 241 ----LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 281 (332)
Q Consensus 241 ----~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~ 281 (332)
+..+. .|...+.+++|+||+++|++|+.|+.+ +|+..
T Consensus 240 ~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 240 PPRALITVK---LSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEECCCEE---CSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred cceeeEeec---CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 44444 456788999999999999999877665 67664
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-36 Score=279.89 Aligned_cols=277 Identities=17% Similarity=0.213 Sum_probs=220.8
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEE
Q 020021 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRY 116 (332)
Q Consensus 37 I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~ 116 (332)
+++++|+|++++|++++.|+++++||+.+++....+..+ ..+...++++++..+++++. |+.|++||+.+++....
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~ 134 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTT---EGDIKVLDSNFNLQREI 134 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEET---TSCEEEECTTSCEEEEE
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEEC---CCCEEEEeCCCcceeee
Confidence 447899999999999999999999999988777666655 33455578889988888864 78999999999999888
Q ss_pred eecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCe-EEEEEeCCEEEEEECccCC
Q 020021 117 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGL-VFAVAFGGYIRMFDARKYE 193 (332)
Q Consensus 117 ~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~i~vwd~~~~~ 193 (332)
+.+|...|++++|+|++++|++++.|++|++||++++++...+..+. .....+++++. +++++.|+.|++||++..+
T Consensus 135 ~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 135 DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 89999999999999999999999999999999999888777665433 34566777665 5556678999999987542
Q ss_pred CCCeeEEEec-C---------------------CCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCC
Q 020021 194 KGPFDIFSVG-G---------------------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 251 (332)
Q Consensus 194 ~~~~~~~~~~-~---------------------~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 251 (332)
. ...+... . +...+..++|+|+|+++++++.||.|++||+.+++.+..+. ..+.
T Consensus 215 ~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~ 290 (420)
T 3vl1_A 215 T--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLP--SKFT 290 (420)
T ss_dssp E--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEEC--CTTS
T ss_pred e--eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcc--cccC
Confidence 1 1111100 0 12456667789999999999999999999999988766553 2456
Q ss_pred CcceEEEECCCCC-EEEEEcCCCcEEEEECCCCce-EEEecC-CCCCCceEEeCCCeeEEEeccce--EEEecccc
Q 020021 252 NSTLEASFSPEGM-FVISGSGDGSVYAWSVRSGKE-VASWMS-FDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDL 322 (332)
Q Consensus 252 ~~~~~v~~spdg~-~l~sgs~Dg~i~vWd~~~~~~-~~~~~~-~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~ 322 (332)
..+.+++|+|+++ +|++|+.||.|++||+.+++. +..+.. |...+.++.| |++++|++++.| +++|+...
T Consensus 291 ~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 291 CSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECC
T ss_pred CCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccC
Confidence 7889999999999 999999999999999998754 566665 6667777755 577889998877 78887543
No 59
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.6e-35 Score=258.51 Aligned_cols=273 Identities=16% Similarity=0.221 Sum_probs=217.4
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeee--cccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceE
Q 020021 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS--KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (332)
Q Consensus 37 I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~ 114 (332)
.++|+||+++ +||+| .|++|+|||+.++++++.+.. |...|..++|+++++.+++++. |++|++||+++++.+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~---Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC---CCcEEEeecCCceeE
Confidence 5789999876 66655 599999999999999988764 5567999999999999998865 889999999999999
Q ss_pred EEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEE-EEEEecC--ceeEEEcCCCe-EEEEEeCCEEEEEECc
Q 020021 115 RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ-GLLRVQG--RPAAAYDDQGL-VFAVAFGGYIRMFDAR 190 (332)
Q Consensus 115 ~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~-~~~~~~~--~~~~~~~~~~~-~~~~~~~~~i~vwd~~ 190 (332)
..+.+|...+.++.+ ++..+++++.|+.+++|+....... ..+..+. .....+.+.+. +++++.|+.|++||++
T Consensus 103 ~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 103 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 999999999887655 5689999999999999998765433 2333222 23445556554 5556678999999998
Q ss_pred cCCCCCeeEEEecCCCCCceeEEEcCCCCEE---EEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEE
Q 020021 191 KYEKGPFDIFSVGGDISDANVVKFSNDGRLM---LLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 267 (332)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l---~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~ 267 (332)
..+...........+...+..++++|++..+ ++++.++.|++||........... +...+..+.|+|++++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 181 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD----AHSQVCSILWSPHYKELI 256 (318)
T ss_dssp CBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE----CSSCEEEEEEETTTTEEE
T ss_pred CCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc----ceeeeeeeeecccccceE
Confidence 6543322233334455678889999987533 456788999999998877665443 345677889999999888
Q ss_pred EEc--CCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEecc
Q 020021 268 SGS--GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 320 (332)
Q Consensus 268 sgs--~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~ 320 (332)
+++ .|+.|+|||+.+++.+..+.+|.+.|++|+|+||+++|+|++.| +++|+.
T Consensus 257 ~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp EEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 764 89999999999999999999999999999999999999999988 777765
No 60
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.3e-35 Score=269.45 Aligned_cols=241 Identities=17% Similarity=0.262 Sum_probs=200.2
Q ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceE
Q 020021 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~ 114 (332)
..|.+++|+|+|++|++|+.|++|+|||+.+++++..+.+|...|..++|+|++..+++++. |++|++||+.++++.
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~---d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG---DRTVRIWDLRTGQCS 200 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC---CCcEEEEECCCCeeE
Confidence 35999999999999999999999999999999999999999999999999999999988764 889999999999887
Q ss_pred EEeecccccEEEEEecC-CCCeEEEeeCCCcEEEEeCCCceEEEEEEe-------c--CceeEEEcCCCe-EEEEEeCCE
Q 020021 115 RYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRV-------Q--GRPAAAYDDQGL-VFAVAFGGY 183 (332)
Q Consensus 115 ~~~~~h~~~V~~v~~~~-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-------~--~~~~~~~~~~~~-~~~~~~~~~ 183 (332)
..+. |...+.+++|+| ++++|++++.|++|++||++++.+...+.. + ......+++++. +++++.|+.
T Consensus 201 ~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 201 LTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 7776 567899999999 899999999999999999998877655521 1 233567777775 445556899
Q ss_pred EEEEECccCCCC--------CeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcce
Q 020021 184 IRMFDARKYEKG--------PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (332)
Q Consensus 184 i~vwd~~~~~~~--------~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 255 (332)
|++||++..... ........+|...+.+++++|+++++++++.|+.|++||..+++.+..+. .|...+.
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~---~h~~~v~ 356 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ---GHRNSVI 356 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC---CCCCCEE
Confidence 999998754211 11123445677789999999999999999999999999999999887776 4677888
Q ss_pred EEEECC------CCCEEEEEcCCCcEEEEECCC
Q 020021 256 EASFSP------EGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 256 ~v~~sp------dg~~l~sgs~Dg~i~vWd~~~ 282 (332)
+++|+| ++++|+||+.||+|+||++.+
T Consensus 357 ~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 357 SVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 999876 789999999999999999854
No 61
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.2e-35 Score=271.54 Aligned_cols=282 Identities=19% Similarity=0.301 Sum_probs=233.7
Q ss_pred cccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCce
Q 020021 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (332)
Q Consensus 23 ~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~ 102 (332)
+.+..+.+.+|.+.|.++.|+ ++++++|+.|++|++||+.+++++..+..|...|..+++. +..+++++. |++
T Consensus 148 ~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~---dg~ 220 (445)
T 2ovr_B 148 TGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSR---DAT 220 (445)
T ss_dssp TCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEET---TSE
T ss_pred CCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeC---CCE
Confidence 456778899999999999998 6799999999999999999999999999999889888885 556777764 889
Q ss_pred eEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCce--eEEEcCCCeEEEEEe
Q 020021 103 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAF 180 (332)
Q Consensus 103 v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 180 (332)
|++||+.+++.+..+.+|...|.++.+ +++.+++++.||+|++||++++++...+..+... ...+ .+..+++++.
T Consensus 221 i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~ 297 (445)
T 2ovr_B 221 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSL 297 (445)
T ss_dssp EEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEEEEET
T ss_pred EEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEEEEeC
Confidence 999999999999999999999999998 7889999999999999999998887776544322 2333 4455666777
Q ss_pred CCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEEC
Q 020021 181 GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS 260 (332)
Q Consensus 181 ~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~s 260 (332)
|+.|++||++..+ ......++...+.++. +++.++++++.||.|++||+.+++.+..+.....+...+.+++|+
T Consensus 298 d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 371 (445)
T 2ovr_B 298 DTSIRVWDVETGN----CIHTLTGHQSLTSGME--LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 371 (445)
T ss_dssp TSCEEEEETTTCC----EEEEECCCCSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC
T ss_pred CCeEEEEECCCCC----EEEEEcCCcccEEEEE--EeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC
Confidence 9999999997643 2233445555555554 467899999999999999999999888887554567788888884
Q ss_pred CCCCEEEEEcCCCcEEEEECCCCceEEEe-----cCCCCCCceEEeCCCeeEEEeccce------EEEecccc
Q 020021 261 PEGMFVISGSGDGSVYAWSVRSGKEVASW-----MSFDTEPPVIKWTPGSLMFVTGSSE------LSFWIPDL 322 (332)
Q Consensus 261 pdg~~l~sgs~Dg~i~vWd~~~~~~~~~~-----~~~~~~v~~l~~sp~~~~l~t~~~d------~~~w~~~~ 322 (332)
+++|++|+.||.|++||+.+++.+..+ ..|.+.|++++|+|++..+++++.| +.+|+.+.
T Consensus 372 --~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 372 --KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp --SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred --CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 689999999999999999999988877 4678889999999999999998875 44566544
No 62
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-36 Score=270.38 Aligned_cols=255 Identities=13% Similarity=0.110 Sum_probs=205.3
Q ss_pred cceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcC--CCeeeEEeeecccceeEEEEccC--CCEEEEecCCCCC
Q 020021 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGWD 100 (332)
Q Consensus 25 ~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~s~~g~d 100 (332)
++.+.|.+|.++|.+++|+|++++|++|+.|++|+|||+. +++++..+..|...|..++|+++ +..+++++. |
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~---d 78 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---D 78 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---T
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc---C
Confidence 3457799999999999999999999999999999999998 56777888899999999999877 788888764 7
Q ss_pred ceeEEEEccCCc--eEEEeecccccEEEEEecCC--CCeEEEeeCCCcEEEEeCCCceEEEEEE--ec--CceeEEEcC-
Q 020021 101 ESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLR--VQ--GRPAAAYDD- 171 (332)
Q Consensus 101 ~~v~v~d~~~~~--~~~~~~~h~~~V~~v~~~~~--~~~l~s~s~Dg~i~iWd~~~~~~~~~~~--~~--~~~~~~~~~- 171 (332)
+.|++||+.+++ .+..+.+|...|.+++|+|+ +++|++++.|++|++||++.+....... .+ ......+.+
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 899999999987 77888899999999999999 9999999999999999998774332222 22 223456666
Q ss_pred ------------CC-eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCC---CCEEEEEcCCCeEEEEEc
Q 020021 172 ------------QG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND---GRLMLLTTMEGHIHVLDS 235 (332)
Q Consensus 172 ------------~~-~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d---g~~l~~~~~dg~i~i~d~ 235 (332)
++ .+++++.|+.|++||++.............+|...+.+++|+|+ ++++++++.||.|++||+
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp C----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 34 45556678999999998654322233455667788999999999 899999999999999999
Q ss_pred cCCeEe--EEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 236 FRGTLL--STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 236 ~~~~~~--~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
.++... ........+...+.+++|+|++++|++++.||.|++|++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 239 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 886421 11111223567788999999999999999999999999974
No 63
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-37 Score=280.31 Aligned_cols=279 Identities=15% Similarity=0.229 Sum_probs=225.3
Q ss_pred CCcEEEEEECCCCC-EEEEE----------eCCCcEEEEEcCCCe---eeEEeeecccceeEEEEccCCCEEEEecCCCC
Q 020021 34 NGRISSMDFHKSSS-YLVTA----------SDDESIRLYDVTAAT---CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW 99 (332)
Q Consensus 34 ~~~I~~i~~s~dg~-~l~tg----------s~D~tv~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~ 99 (332)
...|.+++|+|++. +|++| +.|++|+|||+.+++ .+..+ .|...|..++|++++..+++++.
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~--- 87 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALD--- 87 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEES---
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEcc---
Confidence 34688999999986 99999 899999999999876 33333 46778999999999999988764
Q ss_pred CceeEEEEccC----CceEEEeecccccEEEEEecCC-CCeEEEeeCCCcEEEEeCCCce------EEEEE---Ee--cC
Q 020021 100 DESLRLLSLHD----NKYLRYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEK------CQGLL---RV--QG 163 (332)
Q Consensus 100 d~~v~v~d~~~----~~~~~~~~~h~~~V~~v~~~~~-~~~l~s~s~Dg~i~iWd~~~~~------~~~~~---~~--~~ 163 (332)
|+.|++||+.. .+.+..+.+|...|++++|+|+ +++|++++.|++|++||++++. ....+ .. ..
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC
Confidence 78999999987 4578899999999999999998 8999999999999999998775 22111 11 12
Q ss_pred ceeEEEcCC-Ce-EEEEEeCCEEEEEECccCCCCCeeEEEecCC------CCCceeEEEcCCC-CEEEEEcCCC---eEE
Q 020021 164 RPAAAYDDQ-GL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGD------ISDANVVKFSNDG-RLMLLTTMEG---HIH 231 (332)
Q Consensus 164 ~~~~~~~~~-~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~------~~~v~~v~~s~dg-~~l~~~~~dg---~i~ 231 (332)
.....++++ +. +++++.++.|++||++..+. ......+ ...+.+++|+|++ .++++++.|+ .|+
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKKE----VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTTEE----EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc----ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 335667765 44 44555689999999976421 2222222 5678999999998 6899999998 999
Q ss_pred EEEccCC-eEeEEeeecCCCCCcceEEEECC-CCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCe-eEE
Q 020021 232 VLDSFRG-TLLSTYNVKPVSRNSTLEASFSP-EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS-LMF 308 (332)
Q Consensus 232 i~d~~~~-~~~~~~~~~~~~~~~~~~v~~sp-dg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~-~~l 308 (332)
+||+.++ ..+..+. ..|...+..++|+| ++++|++++.||+|++||+.+++.+..+..|...+.+++|+|++ .+|
T Consensus 244 ~~d~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l 321 (416)
T 2pm9_A 244 IWDLRNANTPLQTLN--QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLF 321 (416)
T ss_dssp EEETTSTTSCSBCCC--SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEE
T ss_pred EEeCCCCCCCcEEee--cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEE
Confidence 9999886 3443332 13567889999999 99999999999999999999999999999999999999999999 899
Q ss_pred Eeccce--EEEecccc
Q 020021 309 VTGSSE--LSFWIPDL 322 (332)
Q Consensus 309 ~t~~~d--~~~w~~~~ 322 (332)
++++.| +++|+...
T Consensus 322 ~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 322 ACASFDNKIEVQTLQN 337 (416)
T ss_dssp EECCSSSEEEEEESCC
T ss_pred EEEecCCcEEEEEccC
Confidence 999887 78887644
No 64
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.7e-36 Score=273.90 Aligned_cols=266 Identities=19% Similarity=0.289 Sum_probs=210.3
Q ss_pred eeEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCe-------eeEEeeecccceeEEEEc
Q 020021 13 SLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT-------CLKTINSKKYGVDLVCFT 85 (332)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~-------~~~~~~~~~~~v~~~~~~ 85 (332)
.+++|+. ...+....+++|...|.+++|+|+|++|++|+.|++++|||+.+.. ....+.+|...+..+.|.
T Consensus 89 ~v~iWd~--~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~ 166 (380)
T 3iz6_a 89 RLIVWNA--LTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYV 166 (380)
T ss_dssp EEEEEET--TTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCC
T ss_pred eEEEEEC--CCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEe
Confidence 4666663 2345667899999999999999999999999999999999987532 345677888888889999
Q ss_pred cCCC-EEEEecCCCCCceeEEEEccCCceEEEe-----ecccccEEEEEecC-CCCeEEEeeCCCcEEEEeCCC-ceEEE
Q 020021 86 SHPT-TVIYSSKNGWDESLRLLSLHDNKYLRYF-----KGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRA-EKCQG 157 (332)
Q Consensus 86 ~~~~-~~~~~s~~g~d~~v~v~d~~~~~~~~~~-----~~h~~~V~~v~~~~-~~~~l~s~s~Dg~i~iWd~~~-~~~~~ 157 (332)
|+.. .+++++ .|++|++||+.+++.+..+ .+|...|.+++|++ ++++|+||+.|++|++||++. +.+..
T Consensus 167 ~~~~~~l~s~s---~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~ 243 (380)
T 3iz6_a 167 PDQETRLITGS---GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR 243 (380)
T ss_dssp SSSSSCEEEEC---TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCE
T ss_pred cCCCCEEEEEC---CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceE
Confidence 8755 466664 3899999999999988877 68999999999987 889999999999999999974 45555
Q ss_pred EEEec--CceeEEEcCCCeEE-EEEeCCEEEEEECccCCCCCeeEEEec-----CCCCCceeEEEcCCCCEEEEEcCCCe
Q 020021 158 LLRVQ--GRPAAAYDDQGLVF-AVAFGGYIRMFDARKYEKGPFDIFSVG-----GDISDANVVKFSNDGRLMLLTTMEGH 229 (332)
Q Consensus 158 ~~~~~--~~~~~~~~~~~~~~-~~~~~~~i~vwd~~~~~~~~~~~~~~~-----~~~~~v~~v~~s~dg~~l~~~~~dg~ 229 (332)
.+..+ ......+++++..+ +++.|++|++||++... ....+... .+...+.+++|+|+|+++++++.||.
T Consensus 244 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 244 TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH--QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE--EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc--EEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 55433 23466778877555 45568999999998642 11222111 11224789999999999999999999
Q ss_pred EEEEEccCCeEeEEeee-cCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCce
Q 020021 230 IHVLDSFRGTLLSTYNV-KPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE 285 (332)
Q Consensus 230 i~i~d~~~~~~~~~~~~-~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~ 285 (332)
|++||..+++.+..+.. ...|...+.+++|+|||++|+|||.||+|+||++...+.
T Consensus 322 i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 322 CYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp EEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred EEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 99999998887766532 235778899999999999999999999999999976543
No 65
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.5e-35 Score=263.63 Aligned_cols=249 Identities=13% Similarity=0.195 Sum_probs=197.8
Q ss_pred cceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeE
Q 020021 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (332)
Q Consensus 25 ~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~ 104 (332)
...+.|.+|...|.+++|+|++.+++||+.|++|++||+.+++++..+.+|...|..++|+|++..+++++. |++|+
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~---d~~i~ 143 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA---EREIK 143 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET---TSCEE
T ss_pred cccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC---CCEEE
Confidence 456789999999999999999999999999999999999999999999999999999999999999988764 88999
Q ss_pred EEEccCCceEEEee---cccccEEEEEecCCC----------CeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEE
Q 020021 105 LLSLHDNKYLRYFK---GHHDRVVSLSLCSSK----------DCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAY 169 (332)
Q Consensus 105 v~d~~~~~~~~~~~---~h~~~V~~v~~~~~~----------~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~ 169 (332)
+||+.. .....+. +|...|.+++|+|++ .+|++++.|++|++||.+ ......+..+. .....+
T Consensus 144 ~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~ 221 (343)
T 2xzm_R 144 LWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSI 221 (343)
T ss_dssp EEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEE
T ss_pred EEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEE
Confidence 999974 3333333 799999999999987 689999999999999954 44444444332 345677
Q ss_pred cCCCeEEE-EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeE--Eeee
Q 020021 170 DDQGLVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS--TYNV 246 (332)
Q Consensus 170 ~~~~~~~~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~--~~~~ 246 (332)
++++.+++ ++.|+.|++||++..... ...+. +...+.+++|+|++++++++ .|+.|++||+.+++... .+..
T Consensus 222 s~~g~~l~sgs~dg~v~iwd~~~~~~~-~~~~~---~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~ 296 (343)
T 2xzm_R 222 SPNGKYIATGGKDKKLLIWDILNLTYP-QREFD---AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEA 296 (343)
T ss_dssp CTTSSEEEEEETTCEEEEEESSCCSSC-SEEEE---CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCC
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCccc-ceeec---CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeec
Confidence 88776554 556899999999643322 22222 12358999999999987654 67889999998766443 2221
Q ss_pred c--------CCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCC
Q 020021 247 K--------PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283 (332)
Q Consensus 247 ~--------~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~ 283 (332)
. ..+...+.+++|+|+|++|++|+.||+|++|++.++
T Consensus 297 ~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 297 EPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 1 135567889999999999999999999999998764
No 66
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=269.56 Aligned_cols=297 Identities=15% Similarity=0.196 Sum_probs=230.2
Q ss_pred ccceeEeccCCCcEEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeeeEEee-------------ecccceeEEEEcc-CC
Q 020021 24 MEVGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTIN-------------SKKYGVDLVCFTS-HP 88 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~-dg~~l~tgs~D~tv~iwd~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~ 88 (332)
.+....+++|.+.|++++|+| ++++|++|+.|++|++||+.+++....+. .|...|..++|++ ++
T Consensus 33 ~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 112 (408)
T 4a11_B 33 NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT 112 (408)
T ss_dssp CTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT
T ss_pred CcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC
Confidence 455677899999999999999 99999999999999999999887665543 4778899999999 56
Q ss_pred CEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCC---CCeEEEeeCCCcEEEEeCCCceEEEEEEecC--
Q 020021 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSS---KDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-- 163 (332)
Q Consensus 89 ~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~---~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~-- 163 (332)
..+++++. |+.|++||+.+++.+..+. |...+.++.+++. +.++++++.|+.|++||++++++...+..+.
T Consensus 113 ~~l~s~~~---d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 188 (408)
T 4a11_B 113 GMFTSSSF---DKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQE 188 (408)
T ss_dssp TCEEEEET---TSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSC
T ss_pred cEEEEEeC---CCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCc
Confidence 67777654 8899999999998887776 7888999999984 4499999999999999999887776665432
Q ss_pred ceeEEEcCCCe--EEEEEeCCEEEEEECccCCCCCeeE------------EEecCCCCCceeEEEcCCCCEEEEEcCCCe
Q 020021 164 RPAAAYDDQGL--VFAVAFGGYIRMFDARKYEKGPFDI------------FSVGGDISDANVVKFSNDGRLMLLTTMEGH 229 (332)
Q Consensus 164 ~~~~~~~~~~~--~~~~~~~~~i~vwd~~~~~~~~~~~------------~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~ 229 (332)
.....+++++. +++++.|+.|++||++......... .....+...+..++|+|+|+++++++.||.
T Consensus 189 v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 34566777664 5566678999999998653211100 001245567899999999999999999999
Q ss_pred EEEEEccCCeEeEEeeecC--CCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeE
Q 020021 230 IHVLDSFRGTLLSTYNVKP--VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLM 307 (332)
Q Consensus 230 i~i~d~~~~~~~~~~~~~~--~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~ 307 (332)
|++||+.+++....+.... ..............+..++.++.|+.|++||+.+++.+..+..|...|.+++|+|++++
T Consensus 269 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 348 (408)
T 4a11_B 269 MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQE 348 (408)
T ss_dssp EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTE
T ss_pred EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCE
Confidence 9999999887654332111 11111111222344556667788999999999999999999999999999999999999
Q ss_pred EEeccce--EEEecccccc
Q 020021 308 FVTGSSE--LSFWIPDLSK 324 (332)
Q Consensus 308 l~t~~~d--~~~w~~~~~~ 324 (332)
|++++.| +++|++...+
T Consensus 349 l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 349 LYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EEEEETTSCEEEEEECC--
T ss_pred EEEECCCCeEEEEeCCCCC
Confidence 9999887 8888875543
No 67
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-34 Score=256.72 Aligned_cols=256 Identities=18% Similarity=0.326 Sum_probs=211.0
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIY 93 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 93 (332)
+.+|+- ...+..+.+.+|...|.+++|+|++++|++|+.|++|++||+.+++++..+..|...|..++|+|++..+++
T Consensus 47 i~iw~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 124 (312)
T 4ery_A 47 IKIWGA--YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 124 (312)
T ss_dssp EEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred EEEEeC--CCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 444542 234566789999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC---ceeEEEc
Q 020021 94 SSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG---RPAAAYD 170 (332)
Q Consensus 94 ~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~---~~~~~~~ 170 (332)
++. |+.|++||+.+++.+..+..|..+|.+++|+|++++|++++.|+.|++||++++++...+.... .....++
T Consensus 125 ~~~---d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 201 (312)
T 4ery_A 125 GSF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 201 (312)
T ss_dssp EET---TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEEC
T ss_pred EeC---CCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEEC
Confidence 864 8899999999999999999999999999999999999999999999999999888766553322 2345677
Q ss_pred CCCeEE-EEEeCCEEEEEECccCCCCCeeEEEecCCCCC--ceeEEE-cCCCCEEEEEcCCCeEEEEEccCCeEeEEeee
Q 020021 171 DQGLVF-AVAFGGYIRMFDARKYEKGPFDIFSVGGDISD--ANVVKF-SNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV 246 (332)
Q Consensus 171 ~~~~~~-~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~--v~~v~~-s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 246 (332)
+++.++ +++.|+.|++||++..+ ......++... .....+ .+++.++++++.||.|++||+.+++.+..+.
T Consensus 202 ~~~~~l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~- 276 (312)
T 4ery_A 202 PNGKYILAATLDNTLKLWDYSKGK----CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ- 276 (312)
T ss_dssp TTSSEEEEEETTTEEEEEETTTTE----EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEEC-
T ss_pred CCCCEEEEEcCCCeEEEEECCCCc----EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhh-
Confidence 776544 45568999999997542 12223333322 122334 4678999999999999999999999887776
Q ss_pred cCCCCCcceEEEECCCCCEEEEEc--CCCcEEEEECC
Q 020021 247 KPVSRNSTLEASFSPEGMFVISGS--GDGSVYAWSVR 281 (332)
Q Consensus 247 ~~~~~~~~~~v~~spdg~~l~sgs--~Dg~i~vWd~~ 281 (332)
.|...+..++|+|+++++++++ .|++|++|+..
T Consensus 277 --~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 277 --GHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp --CCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred --ccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 4667899999999999999997 69999999864
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.7e-35 Score=267.91 Aligned_cols=278 Identities=18% Similarity=0.246 Sum_probs=224.7
Q ss_pred eccCCCcE--EEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeee-cccceeEEEEccCCCEEEEecCCCCCceeEEE
Q 020021 30 FRDYNGRI--SSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (332)
Q Consensus 30 l~~h~~~I--~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~ 106 (332)
..+|...+ .+++|+ +..+++++.|++|++||+.++++...+.. |...|..++|++++..+++++. |+.|++|
T Consensus 87 ~~~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~---dg~i~iw 161 (401)
T 4aez_A 87 APGIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG---NGLVDIY 161 (401)
T ss_dssp CTTCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET---TSCEEEE
T ss_pred CCCCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC---CCeEEEE
Confidence 34676654 445555 46688999999999999999998887776 6778999999999999988865 7899999
Q ss_pred EccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCC-CceEEEEEEecC--ceeEEEcCCCeEEE-EEeCC
Q 020021 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR-AEKCQGLLRVQG--RPAAAYDDQGLVFA-VAFGG 182 (332)
Q Consensus 107 d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~ 182 (332)
|+.+++.+..+.+|...|.+++| +++.|++++.||.|++||++ .+.....+..+. .....+++++.+++ ++.|+
T Consensus 162 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 162 DVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 99999999999999999999999 45899999999999999998 444444554332 34566777765554 55689
Q ss_pred EEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCC-EEEEEc--CCCeEEEEEccCCeEeEEeeecCCCCCcceEEEE
Q 020021 183 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259 (332)
Q Consensus 183 ~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~ 259 (332)
.|++||++... .......+...+.+++|+|++. ++++++ .|+.|++||+.+++.+..+. +...+..++|
T Consensus 240 ~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~ 311 (401)
T 4aez_A 240 VVQIWDARSSI----PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD----AGSQVTSLIW 311 (401)
T ss_dssp CEEEEETTCSS----EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE----CSSCEEEEEE
T ss_pred eEEEccCCCCC----ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe----CCCcEEEEEE
Confidence 99999998632 2334456677899999999875 555554 79999999999999887775 3456889999
Q ss_pred CCCCCEEEE--EcCCCcEEEEECCCCceEE--EecCCCCCCceEEeCCCeeEEEeccce--EEEecccc
Q 020021 260 SPEGMFVIS--GSGDGSVYAWSVRSGKEVA--SWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDL 322 (332)
Q Consensus 260 spdg~~l~s--gs~Dg~i~vWd~~~~~~~~--~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~ 322 (332)
+|+++++++ |+.||.|++||+.+++... .+..|...|.+++|+|++++|++++.| +++|+...
T Consensus 312 s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 312 SPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp CSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 999999999 5589999999998865543 467899999999999999999999877 88887754
No 69
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.4e-34 Score=278.38 Aligned_cols=305 Identities=14% Similarity=0.172 Sum_probs=224.6
Q ss_pred cceeEeccCCCc-EEEEEECC--CCCEEEEEeCCCcEEEEEcCCC--------eeeEEeeecccceeEEEEccCCCEEEE
Q 020021 25 EVGMSFRDYNGR-ISSMDFHK--SSSYLVTASDDESIRLYDVTAA--------TCLKTINSKKYGVDLVCFTSHPTTVIY 93 (332)
Q Consensus 25 ~~~~~l~~h~~~-I~~i~~s~--dg~~l~tgs~D~tv~iwd~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~~~ 93 (332)
+....|.+|.+. |.+++|+| ++++|++|+.|++|+|||+.++ +++..+..|...+..++|+|++..+++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 677889999999 99999999 9999999999999999999754 566667767777777777777665544
Q ss_pred ecCC------------------------------------------CCCceeEEEEccCCceEEEeecccc---cEEEEE
Q 020021 94 SSKN------------------------------------------GWDESLRLLSLHDNKYLRYFKGHHD---RVVSLS 128 (332)
Q Consensus 94 ~s~~------------------------------------------g~d~~v~v~d~~~~~~~~~~~~h~~---~V~~v~ 128 (332)
++.+ +.|+.+++||+.+++.+..+.+|.. .|.+++
T Consensus 134 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 213 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVE 213 (615)
T ss_dssp EECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEE
T ss_pred eccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEE
Confidence 3321 2378999999999999999999999 999999
Q ss_pred ecCC-CCeEEEeeCCCcEEEEeCCCceEEEEE-E---ecC--ceeEEEcCCCeEEEEEeCCEEEEEECccCCC------C
Q 020021 129 LCSS-KDCFISGSLDRTVLLWDQRAEKCQGLL-R---VQG--RPAAAYDDQGLVFAVAFGGYIRMFDARKYEK------G 195 (332)
Q Consensus 129 ~~~~-~~~l~s~s~Dg~i~iWd~~~~~~~~~~-~---~~~--~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~------~ 195 (332)
|+|+ +++|++++.|+.|++||++++++...+ . .+. .....+.....+++++.|+.|++||++..+. .
T Consensus 214 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 214 FSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp ECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred ECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 9999 999999999999999999998887766 2 222 2345556333455566689999999864320 0
Q ss_pred --------------------------Ce---------eEEEecCCCC---------------------------------
Q 020021 196 --------------------------PF---------DIFSVGGDIS--------------------------------- 207 (332)
Q Consensus 196 --------------------------~~---------~~~~~~~~~~--------------------------------- 207 (332)
.+ ....+.++..
T Consensus 294 ~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~ 373 (615)
T 1pgu_A 294 KQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSN 373 (615)
T ss_dssp TTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCS
T ss_pred CCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccC
Confidence 00 0011111222
Q ss_pred CceeEEE----------------------------------cCC------------------------------------
Q 020021 208 DANVVKF----------------------------------SND------------------------------------ 217 (332)
Q Consensus 208 ~v~~v~~----------------------------------s~d------------------------------------ 217 (332)
.+.+++| +|+
T Consensus 374 ~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (615)
T 1pgu_A 374 LIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVS 453 (615)
T ss_dssp CEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred ceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEE
Confidence 2222222 111
Q ss_pred --CCEEEEEcC-CCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecC-CC
Q 020021 218 --GRLMLLTTM-EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMS-FD 293 (332)
Q Consensus 218 --g~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~-~~ 293 (332)
++++++++. |+.|++||+.+++... .....+...+.+++|+||+++|++++.||.|++||+.+++.+..+.. |.
T Consensus 454 ~~~~~l~~~~~~d~~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~ 531 (615)
T 1pgu_A 454 LSQNYVAVGLEEGNTIQVFKLSDLEVSF--DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT 531 (615)
T ss_dssp ECSSEEEEEETTTSCEEEEETTEEEEEE--ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS
T ss_pred EcCCEEEEeecCCCeEEEEECCCccccc--cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCC
Confidence 334444444 5555666555443321 11234667888999999999999999999999999999999988887 99
Q ss_pred CCCceEEeCC----------CeeEEEeccce--EEEecccc--ccccccccc
Q 020021 294 TEPPVIKWTP----------GSLMFVTGSSE--LSFWIPDL--SKLGAYVGR 331 (332)
Q Consensus 294 ~~v~~l~~sp----------~~~~l~t~~~d--~~~w~~~~--~~~~~~~~~ 331 (332)
..|++++|+| ++++|++++.| +++|+.+. +.+..+.+|
T Consensus 532 ~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h 583 (615)
T 1pgu_A 532 SKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAH 583 (615)
T ss_dssp SCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSS
T ss_pred CceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcC
Confidence 9999999999 99999999877 88898765 355556555
No 70
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=288.50 Aligned_cols=284 Identities=13% Similarity=0.103 Sum_probs=207.0
Q ss_pred eEeccCCCcEEEEEECCC------CCEEEEEeCCCcEEEEEcCCCee-----------eEEeeecccceeEEEEccCCCE
Q 020021 28 MSFRDYNGRISSMDFHKS------SSYLVTASDDESIRLYDVTAATC-----------LKTINSKKYGVDLVCFTSHPTT 90 (332)
Q Consensus 28 ~~l~~h~~~I~~i~~s~d------g~~l~tgs~D~tv~iwd~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~ 90 (332)
.++.+|.+.|.+++|+|+ +.+||+++.|++|+|||+.++++ ..++..|...|.+++|+++ ..
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TT 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-Ce
Confidence 557889999999999997 57999999999999999987643 2356778888999999975 46
Q ss_pred EEEecCCCCCceeEEEEccCC-ceEEEeecccccEEEE--EecCCC-CeEEEeeCCCcEEEEeCCCceEEEEEEecC---
Q 020021 91 VIYSSKNGWDESLRLLSLHDN-KYLRYFKGHHDRVVSL--SLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRVQG--- 163 (332)
Q Consensus 91 ~~~~s~~g~d~~v~v~d~~~~-~~~~~~~~h~~~V~~v--~~~~~~-~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--- 163 (332)
+++++. |++|++||+.++ .+...+.+|.+.|+++ .|++++ .+|+|+|.|++|++||++++++...+..+.
T Consensus 280 lasgs~---DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~ 356 (524)
T 2j04_B 280 VVCGFK---NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS 356 (524)
T ss_dssp EEEEET---TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCC
T ss_pred EEEEeC---CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccC
Confidence 777654 899999999876 4456789999999999 577887 899999999999999998877655443322
Q ss_pred -ceeEEEcCCCeE-EEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEe
Q 020021 164 -RPAAAYDDQGLV-FAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL 241 (332)
Q Consensus 164 -~~~~~~~~~~~~-~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~ 241 (332)
...+.++|++.. ++++.|++|++||++.... ...+.+|...|.+++|||+|+++++++.||+|++||+..+ .+
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~----~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~ 431 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA----VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LL 431 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTTC----CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TT
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECccccc----ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hc
Confidence 235677886654 4455678999999986432 1233467789999999999999999999999999998653 22
Q ss_pred EEeeec--CCCCCcceEEEECCCCCEEEEEcCCCcEEEEECC-CCceEEEecCCCCCCceEEeCCCe---eEEEeccce-
Q 020021 242 STYNVK--PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR-SGKEVASWMSFDTEPPVIKWTPGS---LMFVTGSSE- 314 (332)
Q Consensus 242 ~~~~~~--~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~-~~~~~~~~~~~~~~v~~l~~sp~~---~~l~t~~~d- 314 (332)
..+... ......+..++|+|+++.+. ... .+++|+.. ++..+..+..|..+|.+|+|+|++ ..+++|+.+
T Consensus 432 ~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g 508 (524)
T 2j04_B 432 HGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAG 508 (524)
T ss_dssp TCC------CCCCEEEECBCCSSSCEEE-ECC--CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTS
T ss_pred cccccCccceeeeEEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCc
Confidence 211100 01112456889999999653 322 34455443 466778889999999999999995 488888876
Q ss_pred -EEEeccccc
Q 020021 315 -LSFWIPDLS 323 (332)
Q Consensus 315 -~~~w~~~~~ 323 (332)
+++|.+++.
T Consensus 509 ~vrlw~l~~~ 518 (524)
T 2j04_B 509 LLTLEYLSLE 518 (524)
T ss_dssp EEEEEECSCC
T ss_pred eEEEEEcccc
Confidence 888887653
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-35 Score=294.91 Aligned_cols=296 Identities=15% Similarity=0.158 Sum_probs=214.7
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeee-----------EEeeecccceeEE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL-----------KTINSKKYGVDLV 82 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~-----------~~~~~~~~~v~~~ 82 (332)
+++|+- ...+...++. |.+.|++++|+|++++|++|+.|++|++||+.++++. ..+.+|...|..+
T Consensus 81 v~lWd~--~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl 157 (902)
T 2oaj_A 81 VYVLSL--YSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI 157 (902)
T ss_dssp EEEEET--TTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE
T ss_pred EEEEEC--CCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEE
Confidence 455542 2234455665 7789999999999999999999999999999988764 2234577789999
Q ss_pred EEccCC-CEEEEecCCCCCceeEEEEccCCceEEEeecc------------------cccEEEEEecCCCCeEEEeeCCC
Q 020021 83 CFTSHP-TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH------------------HDRVVSLSLCSSKDCFISGSLDR 143 (332)
Q Consensus 83 ~~~~~~-~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h------------------~~~V~~v~~~~~~~~l~s~s~Dg 143 (332)
+|+|++ ..+++++ .|++| +||+.+++.++.+.+| ...|++++|+|++++|+|++.||
T Consensus 158 ~~sp~~~~~l~~g~---~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg 233 (902)
T 2oaj_A 158 QWNPRDIGTVLISY---EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN 233 (902)
T ss_dssp EEETTEEEEEEEEC---SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC
T ss_pred EEccCCCCEEEEEe---CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC
Confidence 999975 4555554 37899 9999999988888766 57899999999999999999999
Q ss_pred cEEEEeCCCceEEEEEEe-----c-------------C--ceeEEE----------------------------------
Q 020021 144 TVLLWDQRAEKCQGLLRV-----Q-------------G--RPAAAY---------------------------------- 169 (332)
Q Consensus 144 ~i~iWd~~~~~~~~~~~~-----~-------------~--~~~~~~---------------------------------- 169 (332)
+|++||+++++++..... + . .....+
T Consensus 234 ~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~ 313 (902)
T 2oaj_A 234 SLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYT 313 (902)
T ss_dssp CEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEEC
T ss_pred eEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCC
Confidence 999999876554321000 0 0 000000
Q ss_pred --------------------------------------------------------------------------------
Q 020021 170 -------------------------------------------------------------------------------- 169 (332)
Q Consensus 170 -------------------------------------------------------------------------------- 169 (332)
T Consensus 314 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~ 393 (902)
T 2oaj_A 314 PRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLF 393 (902)
T ss_dssp CCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGS
T ss_pred CCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccC
Confidence
Q ss_pred --------------------------------------------------cCCC-eEEEEEeCCEEEEEECccCCCCCee
Q 020021 170 --------------------------------------------------DDQG-LVFAVAFGGYIRMFDARKYEKGPFD 198 (332)
Q Consensus 170 --------------------------------------------------~~~~-~~~~~~~~~~i~vwd~~~~~~~~~~ 198 (332)
++++ .+++++.|++||+||+.........
T Consensus 394 ~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~ 473 (902)
T 2oaj_A 394 PQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNA 473 (902)
T ss_dssp CGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTB
T ss_pred CCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCc
Confidence 0001 1222223455555554432111000
Q ss_pred EEE--ec-----CCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCe--------------------------------
Q 020021 199 IFS--VG-----GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT-------------------------------- 239 (332)
Q Consensus 199 ~~~--~~-----~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~-------------------------------- 239 (332)
.+. +. +|...|.+++|||||++||+++.||+|++||+.+++
T Consensus 474 ~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (902)
T 2oaj_A 474 SFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDV 553 (902)
T ss_dssp CEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEEC
T ss_pred eEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccc
Confidence 111 11 455679999999999999999999999999997663
Q ss_pred -------------EeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEE--E---ec-CCCCCCceEE
Q 020021 240 -------------LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVA--S---WM-SFDTEPPVIK 300 (332)
Q Consensus 240 -------------~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~--~---~~-~~~~~v~~l~ 300 (332)
++..+. .|...|.+++||||| +||+|+.|++|+|||+.++..+. . +. .|...|++|+
T Consensus 554 ~~~~~~~~~~g~~~~~~l~---~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~ 629 (902)
T 2oaj_A 554 RDRAPTGVRQGFMPSTAVH---ANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIE 629 (902)
T ss_dssp GGGCCTTCSEEEEEEEEEC---CCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEE
T ss_pred cccCCCCCCCccceeEEEE---cCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEE
Confidence 122232 477899999999999 99999999999999998776653 2 33 7888999999
Q ss_pred eC-----CC---eeEEEeccce--EEEecc
Q 020021 301 WT-----PG---SLMFVTGSSE--LSFWIP 320 (332)
Q Consensus 301 ~s-----p~---~~~l~t~~~d--~~~w~~ 320 (332)
|+ || +++|++|+.| +++|+.
T Consensus 630 Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 630 FVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 99 88 4899999987 888886
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.2e-35 Score=308.36 Aligned_cols=282 Identities=16% Similarity=0.217 Sum_probs=238.6
Q ss_pred ccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEE---
Q 020021 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS--- 107 (332)
Q Consensus 31 ~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d--- 107 (332)
.+|.+.|.+++|+|+++++++++.|++|++||+.++.++..+.+|...|..++|+|++..+++++. |+.+++||
T Consensus 837 ~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~---dg~v~vw~~~~ 913 (1249)
T 3sfz_A 837 TGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASD---DQTIRVWETKK 913 (1249)
T ss_dssp CSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEEHHH
T ss_pred CCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeC---CCeEEEEEccc
Confidence 489999999999999999999999999999999999999999999989999999999888877754 44555555
Q ss_pred ----------------------------------------------------------------------------ccCC
Q 020021 108 ----------------------------------------------------------------------------LHDN 111 (332)
Q Consensus 108 ----------------------------------------------------------------------------~~~~ 111 (332)
+.++
T Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~ 993 (1249)
T 3sfz_A 914 VCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNN 993 (1249)
T ss_dssp HHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTT
T ss_pred cceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCC
Confidence 4455
Q ss_pred ceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec-CceeEEEcCCCeEEEEEeCCEEEEEECc
Q 020021 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-GRPAAAYDDQGLVFAVAFGGYIRMFDAR 190 (332)
Q Consensus 112 ~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~vwd~~ 190 (332)
+....+.+|...|++++|+|++++|++++.||+|++||+.++.+....... ......+.+++.+++++.++.|++||+.
T Consensus 994 ~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A 994 RVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVI 1073 (1249)
T ss_dssp SCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETT
T ss_pred ceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECC
Confidence 556677889999999999999999999999999999999988765433222 2335567788889999999999999997
Q ss_pred cCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEc
Q 020021 191 KYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270 (332)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs 270 (332)
..+. . ....++...+.+++|+|||+++++++.||+|++||+.+++.+..+. .|...+.+++|+|||++|++|+
T Consensus 1074 ~~~~--~--~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~---~h~~~v~~~~~s~dg~~lat~~ 1146 (1249)
T 3sfz_A 1074 TGRI--E--RDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELK---GHNGCVRCSAFSLDGILLATGD 1146 (1249)
T ss_dssp TTCC--C--EEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCC---CCSSCEEEEEECSSSSEEEEEE
T ss_pred CCce--e--EEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeec---cCCCcEEEEEECCCCCEEEEEe
Confidence 6532 1 2234566789999999999999999999999999999888776655 4667889999999999999999
Q ss_pred CCCcEEEEECCCCceEEEe---------cCCCCCCceEEeCCCeeEEEeccceEEEecccc
Q 020021 271 GDGSVYAWSVRSGKEVASW---------MSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 322 (332)
Q Consensus 271 ~Dg~i~vWd~~~~~~~~~~---------~~~~~~v~~l~~sp~~~~l~t~~~d~~~w~~~~ 322 (332)
.||+|++||+.+++.+..+ ..|...|++++|+||+++++++++.+++|+...
T Consensus 1147 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g~v~vwd~~~ 1207 (1249)
T 3sfz_A 1147 DNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLKWWNVAT 1207 (1249)
T ss_dssp TTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESSSEEEBCSSS
T ss_pred CCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECCCeEEEEECCC
Confidence 9999999999998877655 578889999999999999999988899999754
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.2e-34 Score=264.78 Aligned_cols=276 Identities=18% Similarity=0.365 Sum_probs=227.3
Q ss_pred ccceeEeccCCCcE-EEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCce
Q 020021 24 MEVGMSFRDYNGRI-SSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (332)
Q Consensus 24 ~~~~~~l~~h~~~I-~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~ 102 (332)
.+..+.|.+|.+.| .++ +++|++|++|+.|++|++||+.+++++..+.+|...|..++++ +..+++++. |++
T Consensus 108 ~~~~~~l~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~---dg~ 180 (445)
T 2ovr_B 108 LKSPKVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGST---DRT 180 (445)
T ss_dssp CCCCEEEECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEET---TSC
T ss_pred cceeEEecccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeC---CCe
Confidence 45678899999875 554 4568999999999999999999999999999999999998887 557777654 889
Q ss_pred eEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCce--eEEEcCCCeEEEEEe
Q 020021 103 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFAVAF 180 (332)
Q Consensus 103 v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 180 (332)
|++||+.+++.+..+.+|...|.++.|+ ++.+++++.||+|++||++++++...+..+... ...+ .+..+++++.
T Consensus 181 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~ 257 (445)
T 2ovr_B 181 LKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVVSGAY 257 (445)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CSSCEEEEET
T ss_pred EEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-CCCEEEEEcC
Confidence 9999999999999999999999999995 578999999999999999998887777654332 2333 4556777778
Q ss_pred CCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEEC
Q 020021 181 GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS 260 (332)
Q Consensus 181 ~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~s 260 (332)
|+.|++||++..+ ......++...+.++.+ ++.++++++.||.|++||+.+++.+..+. .+...+..+.
T Consensus 258 dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~-- 326 (445)
T 2ovr_B 258 DFMVKVWDPETET----CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT---GHQSLTSGME-- 326 (445)
T ss_dssp TSCEEEEEGGGTE----EEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEEC---CCCSCEEEEE--
T ss_pred CCEEEEEECCCCc----EeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEc---CCcccEEEEE--
Confidence 9999999987642 23344566677888888 89999999999999999999999887765 3445555554
Q ss_pred CCCCEEEEEcCCCcEEEEECCCCceEEEecC---CCCCCceEEeCCCeeEEEeccce--EEEecccc
Q 020021 261 PEGMFVISGSGDGSVYAWSVRSGKEVASWMS---FDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDL 322 (332)
Q Consensus 261 pdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~---~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~ 322 (332)
++++++++|+.||.|++||+.+++.+..+.. |...|.+++|++ .++++++.| +++|+...
T Consensus 327 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 327 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp EETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS--SEEEEEETTSEEEEEETTT
T ss_pred EeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC--CEEEEEeCCCeEEEEECCC
Confidence 4778999999999999999999999888875 788899999964 688888776 88888754
No 74
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.3e-35 Score=269.06 Aligned_cols=254 Identities=12% Similarity=0.159 Sum_probs=210.6
Q ss_pred cceeEeccCCCcEEEEEECC-CCCEEEEEeCCCcEEEEEcCCC-------eeeEEeeecccceeEEEEccCCC-EEEEec
Q 020021 25 EVGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAA-------TCLKTINSKKYGVDLVCFTSHPT-TVIYSS 95 (332)
Q Consensus 25 ~~~~~l~~h~~~I~~i~~s~-dg~~l~tgs~D~tv~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~-~~~~~s 95 (332)
+....+.+|.+.|.+++|+| ++++|++|+.|++|+|||+.++ +++..+.+|...|..++|+|++. .+++++
T Consensus 72 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~ 151 (402)
T 2aq5_A 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG 151 (402)
T ss_dssp TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE
T ss_pred CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc
Confidence 34556889999999999999 8999999999999999999987 66788899999999999999984 666665
Q ss_pred CCCCCceeEEEEccCCceEEEe--ecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCC
Q 020021 96 KNGWDESLRLLSLHDNKYLRYF--KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQG 173 (332)
Q Consensus 96 ~~g~d~~v~v~d~~~~~~~~~~--~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~ 173 (332)
. |+.|++||+.+++.+..+ .+|...|.+++|+|++++|++++.|++|++||++++++...+..
T Consensus 152 ~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------------ 216 (402)
T 2aq5_A 152 C---DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDR------------ 216 (402)
T ss_dssp T---TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC------------
T ss_pred C---CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeecc------------
Confidence 3 889999999999999999 89999999999999999999999999999999988765433210
Q ss_pred eEEEEEeCCEEEEEECccCCCCCeeEEEecCCC-CCceeEEEcCCCCEEEEE---cCCCeEEEEEccCCeE-eEEeeecC
Q 020021 174 LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI-SDANVVKFSNDGRLMLLT---TMEGHIHVLDSFRGTL-LSTYNVKP 248 (332)
Q Consensus 174 ~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~-~~v~~v~~s~dg~~l~~~---~~dg~i~i~d~~~~~~-~~~~~~~~ 248 (332)
++. ..+..++|+|+|++++++ +.|+.|++||+.+++. +.....
T Consensus 217 ------------------------------~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-- 264 (402)
T 2aq5_A 217 ------------------------------PHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL-- 264 (402)
T ss_dssp ------------------------------SSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC--
T ss_pred ------------------------------CCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec--
Confidence 111 236788999999999999 8999999999987654 222221
Q ss_pred CCCCcceEEEECCCCCEEE-EEcCCCcEEEEECCCCce-EEEecC--CCCCCceEEeCCCeeEEEeccceEEEecccccc
Q 020021 249 VSRNSTLEASFSPEGMFVI-SGSGDGSVYAWSVRSGKE-VASWMS--FDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSK 324 (332)
Q Consensus 249 ~~~~~~~~v~~spdg~~l~-sgs~Dg~i~vWd~~~~~~-~~~~~~--~~~~v~~l~~sp~~~~l~t~~~d~~~w~~~~~~ 324 (332)
.+...+..++|+|++++|+ +|+.||.|++||+.+++. +..+.. |...+.+++|+|++.++++++..+++|++....
T Consensus 265 ~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 265 DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERK 344 (402)
T ss_dssp CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEEEETTE
T ss_pred cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecceeEEEEEcCCCc
Confidence 2445678899999999996 566899999999998874 444433 458899999999999999888889999886544
Q ss_pred c
Q 020021 325 L 325 (332)
Q Consensus 325 ~ 325 (332)
+
T Consensus 345 ~ 345 (402)
T 2aq5_A 345 C 345 (402)
T ss_dssp E
T ss_pred E
Confidence 3
No 75
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2e-34 Score=267.54 Aligned_cols=269 Identities=14% Similarity=0.293 Sum_probs=219.9
Q ss_pred ccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC
Q 020021 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 110 (332)
Q Consensus 31 ~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~ 110 (332)
.+|...|.+++| ++++|++|+.|++|++||+.+++++..+.+|...|..+++ ++..+++++. |++|++||+.+
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~---dg~i~vwd~~~ 202 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS---DSTVRVWDVNT 202 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEET---TSCEEEEESSS
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcC---CCeEEEEECCC
Confidence 467788999877 6899999999999999999999999999999988988877 6778887764 88999999999
Q ss_pred CceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEE---EEEecCce--eEEEcCCCeEEEEEeCCEEE
Q 020021 111 NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQG---LLRVQGRP--AAAYDDQGLVFAVAFGGYIR 185 (332)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~i~ 185 (332)
++.+..+.+|...|.+++|++ +.+++++.||+|++||++++.... .+..+... ...+ .+..+++++.|+.|+
T Consensus 203 ~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 203 GEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIK 279 (435)
T ss_dssp CCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEE
T ss_pred CcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEEeCCCeEE
Confidence 999999999999999999974 699999999999999998776542 22222222 2233 445666677799999
Q ss_pred EEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCE
Q 020021 186 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265 (332)
Q Consensus 186 vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~ 265 (332)
+||++..+ ......++...+.++.+ ++.++++++.||.|++||+.+++.+..+. .|...+.+++| ++++
T Consensus 280 vwd~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~~~~--~~~~ 348 (435)
T 1p22_A 280 VWNTSTCE----FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLE---GHEELVRCIRF--DNKR 348 (435)
T ss_dssp EEETTTCC----EEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEEC---CCSSCEEEEEC--CSSE
T ss_pred EEECCcCc----EEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEe---CCcCcEEEEEe--cCCE
Confidence 99997643 12334456667777777 57899999999999999999999888776 45677877877 8999
Q ss_pred EEEEcCCCcEEEEECCCCc---------eEEEecCCCCCCceEEeCCCeeEEEeccce--EEEecccc
Q 020021 266 VISGSGDGSVYAWSVRSGK---------EVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDL 322 (332)
Q Consensus 266 l~sgs~Dg~i~vWd~~~~~---------~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~ 322 (332)
|++|+.||.|++||+.+++ .+..+..|...|.+++| ++.++++++.| +++|+...
T Consensus 349 l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 349 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp EEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---
T ss_pred EEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCC
Confidence 9999999999999997765 78888999999999999 67789999877 88887644
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9.3e-34 Score=264.61 Aligned_cols=289 Identities=18% Similarity=0.342 Sum_probs=231.2
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEcc--CCCEE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS--HPTTV 91 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~ 91 (332)
+.+|+ +.+.+....+.+|.+.|.+++|+|++ +|++|+.|++|++||+.+++++..+..|...|..++|.+ ++..+
T Consensus 144 i~vwd--~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l 220 (464)
T 3v7d_B 144 IRVYD--SINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI 220 (464)
T ss_dssp EEEEE--TTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEE
T ss_pred EEEEE--CCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEE
Confidence 44444 24456778899999999999999988 999999999999999999999999999999999999985 55567
Q ss_pred EEecCCCCCceeEEEEccCCc-----------------------eEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEE
Q 020021 92 IYSSKNGWDESLRLLSLHDNK-----------------------YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148 (332)
Q Consensus 92 ~~~s~~g~d~~v~v~d~~~~~-----------------------~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iW 148 (332)
++++. |+++++||+.++. .+..+.+|...|.++ +++++++++++.|++|++|
T Consensus 221 ~s~s~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vw 295 (464)
T 3v7d_B 221 VTGSR---DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVW 295 (464)
T ss_dssp EEEET---TSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEE
T ss_pred EEEcC---CCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEE
Confidence 76654 8899999998765 256788999999987 5678999999999999999
Q ss_pred eCCCceEEEEEEecC--ceeEEEcCCC-eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEc
Q 020021 149 DQRAEKCQGLLRVQG--RPAAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT 225 (332)
Q Consensus 149 d~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~ 225 (332)
|++++++...+..+. .....+++++ .+++++.|+.|++||++..+ ......+|...+.+++++ +.++++++
T Consensus 296 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~--~~~l~s~s 369 (464)
T 3v7d_B 296 DVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE----LMYTLQGHTALVGLLRLS--DKFLVSAA 369 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEEC--SSEEEEEE
T ss_pred ECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc----EEEEEeCCCCcEEEEEEc--CCEEEEEe
Confidence 999998877765433 3345666765 45556678999999997632 234556677788888887 58999999
Q ss_pred CCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEE-ecCCCCCCceEEeCCC
Q 020021 226 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVAS-WMSFDTEPPVIKWTPG 304 (332)
Q Consensus 226 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~-~~~~~~~v~~l~~sp~ 304 (332)
.||.|++||+.++....... +...+..++|+|+++++++|+ ||.|++||+.+++.+.. +..|...|.+++|+ +
T Consensus 370 ~dg~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~ 443 (464)
T 3v7d_B 370 ADGSIRGWDANDYSRKFSYH----HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-G 443 (464)
T ss_dssp TTSEEEEEETTTCCEEEEEE----CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-T
T ss_pred CCCcEEEEECCCCceeeeec----CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-C
Confidence 99999999999887655443 344556789999999999998 89999999999998876 67788899999997 3
Q ss_pred eeEEEeccce--EEEecccc
Q 020021 305 SLMFVTGSSE--LSFWIPDL 322 (332)
Q Consensus 305 ~~~l~t~~~d--~~~w~~~~ 322 (332)
..++++++.+ ..+|.++.
T Consensus 444 ~~l~~~~~~~g~~~i~~ldf 463 (464)
T 3v7d_B 444 KTLVAAVEKDGQSFLEILDF 463 (464)
T ss_dssp TEEEEEEEETTEEEEEEEEC
T ss_pred CEEEEEEEeCCeEEEEEeec
Confidence 3455555444 55565553
No 77
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.8e-34 Score=254.77 Aligned_cols=279 Identities=14% Similarity=0.159 Sum_probs=224.9
Q ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCc
Q 020021 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 112 (332)
Q Consensus 33 h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~ 112 (332)
|.++|.+++|+|||++++++..++.+.+|+............|...|..++|++++..+++++ |+.+++||+.+++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----dg~i~iw~~~~~~ 83 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG----KGCVKVWDISHPG 83 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC----BSEEEEEETTSTT
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC----CCeEEEEECCCCC
Confidence 567899999999999999988888887776655444444557888999999999999888764 7899999998765
Q ss_pred e---EEEee--cccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceE--EEEEEecC--ceeEEEcCCCe-EEEEEeCC
Q 020021 113 Y---LRYFK--GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC--QGLLRVQG--RPAAAYDDQGL-VFAVAFGG 182 (332)
Q Consensus 113 ~---~~~~~--~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~--~~~~~~~~--~~~~~~~~~~~-~~~~~~~~ 182 (332)
. +..+. +|...|.+++|+|++++|++++.|+.|++||+++++. ...+..+. .....+.+++. +++++.++
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 163 (337)
T 1gxr_A 84 NKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 163 (337)
T ss_dssp CCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC
Confidence 3 33333 7999999999999999999999999999999988763 33333222 23456677665 44555689
Q ss_pred EEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCC
Q 020021 183 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 262 (332)
Q Consensus 183 ~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spd 262 (332)
.|++||++..+ .......+...+..++|+|+++++++++.||.|++||+.+++.+..+. +...+..++|+|+
T Consensus 164 ~v~~~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~----~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 164 NIAVWDLHNQT----LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD----FTSQIFSLGYCPT 235 (337)
T ss_dssp CEEEEETTTTE----EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEECTT
T ss_pred cEEEEeCCCCc----eeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec----CCCceEEEEECCC
Confidence 99999997532 233445566789999999999999999999999999999998877664 3466888999999
Q ss_pred CCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEecccccc
Q 020021 263 GMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDLSK 324 (332)
Q Consensus 263 g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~~~ 324 (332)
+++|++++.|+.|++||+.+++. ..+..|...+.+++|+|++++|++++.| +++|+....+
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp SSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 99999999999999999988764 4677889999999999999999999877 8888765543
No 78
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8e-34 Score=256.87 Aligned_cols=284 Identities=12% Similarity=0.165 Sum_probs=206.0
Q ss_pred eeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEE
Q 020021 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (332)
Q Consensus 27 ~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~ 106 (332)
..++.+|.+.|.+++|+|||++|++|+.|+ ++|||+.+++.+.....+ .+..+++.+++..+++.+ +.|++|++|
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~d~~v~iW 86 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVT--GVKEVVHIW 86 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEEC--SSTTEEEEE
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEE--CCccEEEEE
Confidence 345689999999999999999999988775 799999988776554332 477788888888776543 237899999
Q ss_pred EccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCc-eEEEEEEecCceeEEEcCCCeEEEE--EeCCE
Q 020021 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE-KCQGLLRVQGRPAAAYDDQGLVFAV--AFGGY 183 (332)
Q Consensus 107 d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 183 (332)
|+.+++.+..+. |...|.++.++++. ++.+ .|+.|++||+.++ +....+.. ......+.+ ..++.. ..+|.
T Consensus 87 d~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~-~~la~~sg~~~g~ 160 (355)
T 3vu4_A 87 DDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR-FGGVCEFSN-GLLVYSNEFNLGQ 160 (355)
T ss_dssp ETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-EEEEEEEET-TEEEEEESSCTTC
T ss_pred ECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-CCceEEEEc-cEEEEeCCCcCcE
Confidence 999999988887 67799999998754 3333 4889999999887 55444433 112233334 333333 35799
Q ss_pred EEEEECccCCC------CC-----ee-EEEecCCCCCceeEEEcCCCCEEEEEcCCCe-EEEEEccCCeEeEEeeecCCC
Q 020021 184 IRMFDARKYEK------GP-----FD-IFSVGGDISDANVVKFSNDGRLMLLTTMEGH-IHVLDSFRGTLLSTYNVKPVS 250 (332)
Q Consensus 184 i~vwd~~~~~~------~~-----~~-~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~ 250 (332)
|++||++.... .. .. ...+.+|...+.+++|+|||+++++++.|++ |++||+.+++.+..+... .|
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g-~h 239 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG-LD 239 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT-TC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC-CC
Confidence 99999986420 00 00 2345678889999999999999999999998 999999999998877521 25
Q ss_pred CCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceE--EEec---------------------CCCCCCceEEeCCCeeE
Q 020021 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV--ASWM---------------------SFDTEPPVIKWTPGSLM 307 (332)
Q Consensus 251 ~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~--~~~~---------------------~~~~~v~~l~~sp~~~~ 307 (332)
...+.+++|+|||++|++++.|++|++||+.++... ..+. ........++|+||++.
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~ 319 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL 319 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCE
Confidence 678999999999999999999999999999765321 1110 11122477999999999
Q ss_pred EEeccce--EEEecccc
Q 020021 308 FVTGSSE--LSFWIPDL 322 (332)
Q Consensus 308 l~t~~~d--~~~w~~~~ 322 (332)
+++++.| +.+|+...
T Consensus 320 l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 320 VVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEEETTTTEEEEEEEEE
T ss_pred EEEEeCCCeEEEEEEEc
Confidence 9998877 66666433
No 79
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.2e-33 Score=258.35 Aligned_cols=271 Identities=15% Similarity=0.190 Sum_probs=203.1
Q ss_pred eeEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEE
Q 020021 13 SLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92 (332)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 92 (332)
++.||+.--+.......+.+|...|++|+|+|+|++||+|+.|++|+|||+.+++++..+.+|...+..+++ ++..++
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~ 203 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILS 203 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEE
Confidence 356665433333333345688999999999999999999999999999999999999999999877776555 566777
Q ss_pred EecCCCCCceeEEEEccC-CceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEE----EEEEec--Cce
Q 020021 93 YSSKNGWDESLRLLSLHD-NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ----GLLRVQ--GRP 165 (332)
Q Consensus 93 ~~s~~g~d~~v~v~d~~~-~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~----~~~~~~--~~~ 165 (332)
+++. |+.+++||... ...+..+.+|...+..+.++|+++++++++.|+.+++||..+++.. ...... ...
T Consensus 204 sgs~---d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~ 280 (420)
T 4gga_A 204 SGSR---SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK 280 (420)
T ss_dssp EEET---TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEE
T ss_pred EEeC---CCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCcee
Confidence 7654 88999999876 4467789999999999999999999999999999999998765432 111111 123
Q ss_pred eEEEcC-CCeEEEEE---eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEc--CCCeEEEEEccCCe
Q 020021 166 AAAYDD-QGLVFAVA---FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT--MEGHIHVLDSFRGT 239 (332)
Q Consensus 166 ~~~~~~-~~~~~~~~---~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~--~dg~i~i~d~~~~~ 239 (332)
...+.+ ...+++++ .|++|++||++.... ..... ....+..+.++|+++.+++++ .|+.|++||+.+++
T Consensus 281 ~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~----~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 281 AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC----LSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 355 (420)
T ss_dssp EEEECTTCTTEEEEEECTTTCEEEEEETTTTEE----EEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred eeeeCCCcccEEEEEeecCCCEEEEEeCCcccc----ceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc
Confidence 345555 33444433 379999999976431 11221 224678899999999888764 78999999999999
Q ss_pred EeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCC
Q 020021 240 LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP 296 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v 296 (332)
++.++. .|...|.+++|+|||++|+|||.||+|+|||+.+.........+...+
T Consensus 356 ~v~~l~---gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~ 409 (420)
T 4gga_A 356 KVAELK---GHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASA 409 (420)
T ss_dssp EEEEEC---CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----------
T ss_pred EEEEEc---CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCc
Confidence 988876 567899999999999999999999999999997765554444444333
No 80
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.5e-34 Score=258.87 Aligned_cols=245 Identities=18% Similarity=0.273 Sum_probs=198.9
Q ss_pred CCCcEEEEEECCC----CCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEcc-CCCEEEEecCCCCCceeEEEE
Q 020021 33 YNGRISSMDFHKS----SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLS 107 (332)
Q Consensus 33 h~~~I~~i~~s~d----g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~s~~g~d~~v~v~d 107 (332)
|...|.+++|+|+ +++|++|+.|++|++||+.+++++..+..|...|..++|+| ++..+++++. |+.|++||
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~---dg~i~iwd 144 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK---DHALRLWN 144 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET---TSCEEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC---CCeEEEEE
Confidence 6688999999999 67999999999999999999999999999999999999999 8888888764 78999999
Q ss_pred ccCCceEEEe---ecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEE------------------------
Q 020021 108 LHDNKYLRYF---KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR------------------------ 160 (332)
Q Consensus 108 ~~~~~~~~~~---~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~------------------------ 160 (332)
+.+++.+..+ .+|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDF 224 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSE
T ss_pred eecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcc
Confidence 9999988888 7899999999999999999999999999999998765432111
Q ss_pred ------ecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCC----------CeeEEEecCCCCCceeEEEcCC--CCEEE
Q 020021 161 ------VQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKG----------PFDIFSVGGDISDANVVKFSND--GRLML 222 (332)
Q Consensus 161 ------~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~----------~~~~~~~~~~~~~v~~v~~s~d--g~~l~ 222 (332)
........+. +..+++++.++.|++||++..... ........++...+..++|+|+ |++++
T Consensus 225 ~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~ 303 (366)
T 3k26_A 225 STRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLA 303 (366)
T ss_dssp EECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEE
T ss_pred ccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEE
Confidence 0112234444 456666677999999998764320 0123344456678899999999 99999
Q ss_pred EEcCCCeEEEEEccCCeEe----EEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 223 LTTMEGHIHVLDSFRGTLL----STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 223 ~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
+++.||.|++||+.+++.. ..+..+ .+...+..++|+|++++|++++.||.|++||+.+
T Consensus 304 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 304 LGNQVGKLYVWDLEVEDPHKAKCTTLTHH-KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EECTTSCEEEEECCSSSGGGCEEEEECCT-TCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEecCCcEEEEECCCCCCccccceEEccc-ccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 9999999999999887543 233321 1257889999999999999999999999999853
No 81
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-35 Score=279.59 Aligned_cols=290 Identities=13% Similarity=0.125 Sum_probs=200.3
Q ss_pred eEeccCCCcEEEEEECCCC---------CEEEE-------------------EeCCCcEEEEEcCCCeee----EEeeec
Q 020021 28 MSFRDYNGRISSMDFHKSS---------SYLVT-------------------ASDDESIRLYDVTAATCL----KTINSK 75 (332)
Q Consensus 28 ~~l~~h~~~I~~i~~s~dg---------~~l~t-------------------gs~D~tv~iwd~~~~~~~----~~~~~~ 75 (332)
.++. +.+.|.+|+|+|++ ++||+ ++.|++|+|||+.++++. .++..|
T Consensus 128 ~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~ 206 (524)
T 2j04_B 128 FIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHS 206 (524)
T ss_dssp EEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEEC
T ss_pred EEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEec
Confidence 3444 67889999999876 45555 568899999999877653 345666
Q ss_pred ccceeEEEEccC------CCEEEEecCCCCCceeEEEEccCCce-----------EEEeecccccEEEEEecCCCCeEEE
Q 020021 76 KYGVDLVCFTSH------PTTVIYSSKNGWDESLRLLSLHDNKY-----------LRYFKGHHDRVVSLSLCSSKDCFIS 138 (332)
Q Consensus 76 ~~~v~~~~~~~~------~~~~~~~s~~g~d~~v~v~d~~~~~~-----------~~~~~~h~~~V~~v~~~~~~~~l~s 138 (332)
...|..++|+|+ +..+++++. |++|++||+..+.. ...+.+|...|++++|+++ ..|++
T Consensus 207 ~~~V~~v~wsp~~~~~~~~~~LAs~s~---DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~las 282 (524)
T 2j04_B 207 FGEVWDLKWHEGCHAPHLVGCLSFVSQ---EGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVC 282 (524)
T ss_dssp CCSEEEEEECSSCCCSSSSCEEEEEET---TSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEE
T ss_pred CCcEEEEEECCCCCCCCCCceEEEEec---CCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEE
Confidence 678999999997 346666653 89999999976532 3478899999999999986 48999
Q ss_pred eeCCCcEEEEeCCCce-EEEEEEecCc--eeE--EEcCCC--eEEEEEeCCEEEEEECccCCCCCeeEEEecCCC--CCc
Q 020021 139 GSLDRTVLLWDQRAEK-CQGLLRVQGR--PAA--AYDDQG--LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI--SDA 209 (332)
Q Consensus 139 ~s~Dg~i~iWd~~~~~-~~~~~~~~~~--~~~--~~~~~~--~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~--~~v 209 (332)
|+.||+|++||++++. +...+..+.. ..+ .+.+++ .+++++.|++|++||++..+.. ..+. ++. ..+
T Consensus 283 gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~--~~~~--~~~~~~~v 358 (524)
T 2j04_B 283 GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATT--KTTV--SRFRGSNL 358 (524)
T ss_dssp EETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHH--CEEE--EECSCCSC
T ss_pred EeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcc--cccc--cccccCcc
Confidence 9999999999998653 3333443332 223 345554 4566677999999999864321 1111 122 247
Q ss_pred eeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe
Q 020021 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW 289 (332)
Q Consensus 210 ~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~ 289 (332)
.+++|+|+++.+++++.|++|++||++++..+..+. .|...|.+++|||+|++|++|+.||+|++||+..+ .+...
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~---gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~ 434 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV---SRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGI 434 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE---ECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeee---cCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hcccc
Confidence 789999999999999999999999999988766665 46788999999999999999999999999998653 32221
Q ss_pred cC-----CCCCCceEEeCCCeeEEEeccceEEEeccc--cccccccccc
Q 020021 290 MS-----FDTEPPVIKWTPGSLMFVTGSSELSFWIPD--LSKLGAYVGR 331 (332)
Q Consensus 290 ~~-----~~~~v~~l~~sp~~~~l~t~~~d~~~w~~~--~~~~~~~~~~ 331 (332)
.. +...+..++|+|++..+.. ..+..+|.++ ...+..+.||
T Consensus 435 ~~~~~~~~~~~v~~v~~sp~g~~~~~-~~~~~~~~~~~~g~~~~~l~gh 482 (524)
T 2j04_B 435 KNSSATQKSLRLWKWDYSIKDDKYRI-DSSYEVYPLTVNDVSKAKIDAH 482 (524)
T ss_dssp ------CCCCEEEECBCCSSSCEEEE-CCCCCCCC-------------C
T ss_pred ccCccceeeeEEEEeccCCCCCeEEc-cCCceecccccCCcceeeecCC
Confidence 11 1113568999999985533 3345556554 3334444443
No 82
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-34 Score=285.21 Aligned_cols=248 Identities=14% Similarity=0.182 Sum_probs=203.7
Q ss_pred eeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcC--CCeeeEEeeecccceeEEEEccC--CCEEEEecCCCCCce
Q 020021 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGWDES 102 (332)
Q Consensus 27 ~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~s~~g~d~~ 102 (332)
...+.+|.++|++++|+|++++|++|+.|++|+|||+. +++++..+.+|...|..++|+++ +..+++++. |+.
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~---Dg~ 78 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGK 78 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET---TSC
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC---CCe
Confidence 45789999999999999999999999999999999998 55777888899999999999988 788888764 889
Q ss_pred eEEEEccCCc--eEEEeecccccEEEEEecCC--CCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEE
Q 020021 103 LRLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAV 178 (332)
Q Consensus 103 v~v~d~~~~~--~~~~~~~h~~~V~~v~~~~~--~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (332)
|++||+.+++ .+..+.+|...|++++|+|+ ++.|++++.||+|++||++++.......
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~------------------ 140 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII------------------ 140 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEE------------------
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeE------------------
Confidence 9999999987 67888999999999999999 9999999999999999997653211110
Q ss_pred EeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcC-------------CCCEEEEEcCCCeEEEEEccCCe----Ee
Q 020021 179 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN-------------DGRLMLLTTMEGHIHVLDSFRGT----LL 241 (332)
Q Consensus 179 ~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~-------------dg~~l~~~~~dg~i~i~d~~~~~----~~ 241 (332)
..++...+.+++|+| ++.++++++.||.|++||+.++. ..
T Consensus 141 -----------------------~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 197 (753)
T 3jro_A 141 -----------------------IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 197 (753)
T ss_dssp -----------------------EECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred -----------------------eecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceee
Confidence 112334567777777 68999999999999999998773 33
Q ss_pred EEeeecCCCCCcceEEEECCC---CCEEEEEcCCCcEEEEECCCCc-----eEEEecCCCCCCceEEeCCCeeEEEeccc
Q 020021 242 STYNVKPVSRNSTLEASFSPE---GMFVISGSGDGSVYAWSVRSGK-----EVASWMSFDTEPPVIKWTPGSLMFVTGSS 313 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~v~~spd---g~~l~sgs~Dg~i~vWd~~~~~-----~~~~~~~~~~~v~~l~~sp~~~~l~t~~~ 313 (332)
..+. .|...+.+++|+|+ +++|++|+.||+|++||+.+++ .+.....|...+++++|+|+++++++++.
T Consensus 198 ~~~~---~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 198 STLE---GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp EEEC---CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS
T ss_pred eeec---CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC
Confidence 3333 56788999999999 9999999999999999998864 23334568889999999999999999988
Q ss_pred e--EEEeccc
Q 020021 314 E--LSFWIPD 321 (332)
Q Consensus 314 d--~~~w~~~ 321 (332)
| +.+|+..
T Consensus 275 Dg~I~vwd~~ 284 (753)
T 3jro_A 275 DNKVTLWKEN 284 (753)
T ss_dssp SSCEECCBCC
T ss_pred CCEEEEEecC
Confidence 7 7777765
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-32 Score=253.21 Aligned_cols=255 Identities=17% Similarity=0.247 Sum_probs=204.3
Q ss_pred cceeEecc-CCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCcee
Q 020021 25 EVGMSFRD-YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (332)
Q Consensus 25 ~~~~~l~~-h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v 103 (332)
+....+.. |.+.|.+++|+|++++|++|+.|++|++||+.+++.+..+..|...|..++| ++..+++++. |+.|
T Consensus 124 ~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~i 198 (401)
T 4aez_A 124 SVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR---SGAI 198 (401)
T ss_dssp CEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEET---TSEE
T ss_pred cEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcC---CCCE
Confidence 34444544 8999999999999999999999999999999999999999999999999988 4567777754 8899
Q ss_pred EEEEcc-CCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCC-CeEEEEE
Q 020021 104 RLLSLH-DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQ-GLVFAVA 179 (332)
Q Consensus 104 ~v~d~~-~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~ 179 (332)
++||+. .+..+..+.+|...|.+++|+|++++|++++.|++|++||++++++...+..+. .....+++. ..+++++
T Consensus 199 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 199 HHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp EEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEE
T ss_pred EEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEe
Confidence 999998 566788999999999999999999999999999999999999888776664332 345667764 4566555
Q ss_pred e---CCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEE--cCCCeEEEEEccCCeEeEEeeecCCCCCcc
Q 020021 180 F---GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT--TMEGHIHVLDSFRGTLLSTYNVKPVSRNST 254 (332)
Q Consensus 180 ~---~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 254 (332)
. |+.|++||++... ....+. +...+..++|+|++++++++ +.||.|++||+.+++........ .|...+
T Consensus 279 ~gs~d~~i~i~d~~~~~--~~~~~~---~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~-~h~~~v 352 (401)
T 4aez_A 279 GGTMDKQIHFWNAATGA--RVNTVD---AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIP-AHDTRV 352 (401)
T ss_dssp CCTTTCEEEEEETTTCC--EEEEEE---CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEE-CCSSCC
T ss_pred cCCCCCEEEEEECCCCC--EEEEEe---CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEec-CCCCCE
Confidence 3 8999999997643 222222 33578999999999999994 48999999999987766554432 466788
Q ss_pred eEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEec
Q 020021 255 LEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM 290 (332)
Q Consensus 255 ~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~ 290 (332)
..++|+||+++|++++.||.|++||+.+++.+....
T Consensus 353 ~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 353 LYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp CEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 999999999999999999999999999988776543
No 84
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.3e-33 Score=272.19 Aligned_cols=247 Identities=18% Similarity=0.271 Sum_probs=200.4
Q ss_pred ceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEE
Q 020021 26 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (332)
Q Consensus 26 ~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v 105 (332)
..+.+.+|...|.+++|+|++++|+||+.|++|+|||+.++.++..+.+|...|..++|++++..+++++. |++|++
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---D~~i~i 498 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR---DRTIKL 498 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEE
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC---CCEEEE
Confidence 45678999999999999999999999999999999999999999999999999999999999999998865 889999
Q ss_pred EEccCCceEEEe---ecccccEEEEEecCCC--CeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCeEE-E
Q 020021 106 LSLHDNKYLRYF---KGHHDRVVSLSLCSSK--DCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVF-A 177 (332)
Q Consensus 106 ~d~~~~~~~~~~---~~h~~~V~~v~~~~~~--~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~ 177 (332)
||+......... .+|...|.+++|+|++ ..|++++.|++|++||+++.++...+..+. .....+++++.++ +
T Consensus 499 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s 578 (694)
T 3dm0_A 499 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCAS 578 (694)
T ss_dssp ECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEE
Confidence 998654433322 4799999999999986 589999999999999999988877665443 3456777777655 4
Q ss_pred EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC--------
Q 020021 178 VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV-------- 249 (332)
Q Consensus 178 ~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------- 249 (332)
++.|+.|++||++..+ ...... ....+.+++|+|++.++++++ ++.|++||+.+++.+..+.....
T Consensus 579 g~~Dg~i~iwd~~~~~----~~~~~~-~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 652 (694)
T 3dm0_A 579 GGKDGVVLLWDLAEGK----KLYSLE-ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADN 652 (694)
T ss_dssp EETTSBCEEEETTTTE----EEECCB-CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC--------
T ss_pred EeCCCeEEEEECCCCc----eEEEec-CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccc
Confidence 5568999999997642 122222 235688999999999877765 56699999999988776642110
Q ss_pred --------CCCcceEEEECCCCCEEEEEcCCCcEEEEECC
Q 020021 250 --------SRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 281 (332)
Q Consensus 250 --------~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~ 281 (332)
+...+.+++|||||++|++|+.||+|+||++.
T Consensus 653 ~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 653 SGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp --------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 11135678999999999999999999999985
No 85
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8.2e-34 Score=257.84 Aligned_cols=248 Identities=10% Similarity=0.127 Sum_probs=188.0
Q ss_pred eEeccCCCcEEEEEECCCCCEEEEE-----------eCCCcEEEEEcCCCee-eEEee--------ecccceeEEEEccC
Q 020021 28 MSFRDYNGRISSMDFHKSSSYLVTA-----------SDDESIRLYDVTAATC-LKTIN--------SKKYGVDLVCFTSH 87 (332)
Q Consensus 28 ~~l~~h~~~I~~i~~s~dg~~l~tg-----------s~D~tv~iwd~~~~~~-~~~~~--------~~~~~v~~~~~~~~ 87 (332)
..|.+|...|.+++++ ++.+++| +.|+++|+|++.+.+. +.... .+...+..++|+|+
T Consensus 67 ~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 67 FALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp EECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 3578999999988765 4566655 4688899999875432 22111 12234778999999
Q ss_pred CCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe--cC--
Q 020021 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV--QG-- 163 (332)
Q Consensus 88 ~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~--~~-- 163 (332)
++.+++++. +.|++|++||+++++.+..+. |...|.+++|+|+|+++++++.|+ +++|+..++........ +.
T Consensus 145 g~~la~as~-~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 145 GTVAAIASS-KVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp SSCEEEEES-CSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEE
T ss_pred CCEEEEEEC-CCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCC
Confidence 999877653 568999999999999888876 778899999999999999998665 55565556555433221 11
Q ss_pred ceeEEEcCCCeEEE-EEeCC----EEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCC
Q 020021 164 RPAAAYDDQGLVFA-VAFGG----YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG 238 (332)
Q Consensus 164 ~~~~~~~~~~~~~~-~~~~~----~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~ 238 (332)
...+.+++++..++ ++.++ .++.|++............+.++...|++++|||||++|++++.|+.|++||+.++
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 23456777776554 44554 68889887543333334455677788999999999999999999999999999999
Q ss_pred eEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 239 TLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
+++..+. ..|...|.+++|||||++|||||.|++|||||+..
T Consensus 302 ~~~~~~~--~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 302 SMSKIFK--QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEEET--TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred cEEEEec--CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9887652 25778999999999999999999999999999964
No 86
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.4e-32 Score=273.39 Aligned_cols=295 Identities=17% Similarity=0.242 Sum_probs=236.5
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIY 93 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 93 (332)
+.+|+- ...+..+.+.+|.++|.+++|+|++++|++|+.|++|++||+.+++++..+..|...|..++|+|++..+++
T Consensus 37 v~iwd~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 114 (814)
T 3mkq_A 37 VEIWNY--ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLS 114 (814)
T ss_dssp EEEEET--TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred EEEEEC--CCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEE
Confidence 444542 345667889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ecCCCCCceeEEEEccCC-ceEEEeecccccEEEEEecC-CCCeEEEeeCCCcEEEEeCCCceEEEEEEec---CceeEE
Q 020021 94 SSKNGWDESLRLLSLHDN-KYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ---GRPAAA 168 (332)
Q Consensus 94 ~s~~g~d~~v~v~d~~~~-~~~~~~~~h~~~V~~v~~~~-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~---~~~~~~ 168 (332)
++. |++|++||+.++ .....+.+|...|.+++|+| +++.|++++.||+|++||++++.....+... ......
T Consensus 115 ~~~---dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~ 191 (814)
T 3mkq_A 115 GSD---DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVD 191 (814)
T ss_dssp EET---TSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEE
T ss_pred EcC---CCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEE
Confidence 764 789999999887 67788999999999999999 8899999999999999999877665555432 234556
Q ss_pred EcC--CCe-EEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEee
Q 020021 169 YDD--QGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (332)
Q Consensus 169 ~~~--~~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (332)
+.+ ++. +++++.++.|++||++... ......++...+..++|+|+|+++++++.||.|++||..+++.+..+.
T Consensus 192 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 192 YYPLPDKPYMITASDDLTIKIWDYQTKS----CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp ECCSTTCCEEEEECTTSEEEEEETTTTE----EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCc----EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 665 554 4445568999999987532 233444566789999999999999999999999999999998887765
Q ss_pred ecCCCCCcceEEEECCCCC--EEEEEcCCCcEEEEECCCCceEEE-----------------------------------
Q 020021 246 VKPVSRNSTLEASFSPEGM--FVISGSGDGSVYAWSVRSGKEVAS----------------------------------- 288 (332)
Q Consensus 246 ~~~~~~~~~~~v~~spdg~--~l~sgs~Dg~i~vWd~~~~~~~~~----------------------------------- 288 (332)
.+...+..++|+|+++ +++++ .|+.+.+|++........
T Consensus 268 ---~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (814)
T 3mkq_A 268 ---VGLERSWCIATHPTGRKNYIASG-FDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDE 343 (814)
T ss_dssp ---CSSSSEEEEEECTTCGGGEEEEE-ETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSS
T ss_pred ---cCCCcEEEEEEccCCCceEEEEE-eCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCc
Confidence 3456888999999997 45555 467788998765332111
Q ss_pred --------ecCCCCCCceEEeCCCeeEEEeccce-EEEeccc
Q 020021 289 --------WMSFDTEPPVIKWTPGSLMFVTGSSE-LSFWIPD 321 (332)
Q Consensus 289 --------~~~~~~~v~~l~~sp~~~~l~t~~~d-~~~w~~~ 321 (332)
+..+...+.+++|+|+++++++++.+ +.+|+..
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~ 385 (814)
T 3mkq_A 344 PLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTAL 385 (814)
T ss_dssp CBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETT
T ss_pred cceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECc
Confidence 12344467899999999988887643 7777753
No 87
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-32 Score=275.20 Aligned_cols=203 Identities=10% Similarity=0.155 Sum_probs=163.1
Q ss_pred eccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEcc
Q 020021 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (332)
Q Consensus 30 l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~ 109 (332)
..+|.+.|++++|+|++++||+|+.|++|+|||..+.++...+. |...|..++|++ +..+++++. |++|++||+.
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~---D~~v~lWd~~ 87 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINA---KDTVYVLSLY 87 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEET---TCEEEEEETT
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEEC---cCeEEEEECC
Confidence 35899999999999999999999999999999999888766554 567899999999 777777754 8999999999
Q ss_pred CCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe--------------cCceeEEEcCC--C
Q 020021 110 DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV--------------QGRPAAAYDDQ--G 173 (332)
Q Consensus 110 ~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~--------------~~~~~~~~~~~--~ 173 (332)
+++.+..+. |...|++++|+|++++|++|+.||+|++||++++++. .+.. .......+++. .
T Consensus 88 ~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~ 165 (902)
T 2oaj_A 88 SQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIG 165 (902)
T ss_dssp TCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEE
T ss_pred CCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccccCCCCeEEEEEccCCCC
Confidence 999888886 7789999999999999999999999999999988764 2211 12335667774 2
Q ss_pred eEEEEEeCCEEEEEECccCCCCCeeEEEe----------------cCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccC
Q 020021 174 LVFAVAFGGYIRMFDARKYEKGPFDIFSV----------------GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237 (332)
Q Consensus 174 ~~~~~~~~~~i~vwd~~~~~~~~~~~~~~----------------~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~ 237 (332)
.+++++.++.| +||++..+. ...+.. ..+...+.+++|+|||+++++++.||.|++||+.+
T Consensus 166 ~l~~g~~dg~v-lWd~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 166 TVLISYEYVTL-TYSLVENEI--KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp EEEEECSSCEE-EEETTTTEE--EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred EEEEEeCCCcE-EEECCCCce--EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 45555568999 999976421 111111 11235689999999999999999999999999998
Q ss_pred CeEeE
Q 020021 238 GTLLS 242 (332)
Q Consensus 238 ~~~~~ 242 (332)
++.+.
T Consensus 243 g~~~~ 247 (902)
T 2oaj_A 243 GHMIM 247 (902)
T ss_dssp CCEEE
T ss_pred CcEEE
Confidence 88765
No 88
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.5e-32 Score=241.44 Aligned_cols=255 Identities=16% Similarity=0.196 Sum_probs=197.4
Q ss_pred eEecHHHHhcccceeE--eccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEE
Q 020021 14 LELSEEILQSMEVGMS--FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTV 91 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~--l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 91 (332)
+++|+.- +.+..+. +.+|...|++++|+|++++|++|+.|++|+|||+.++++++.+.+|...+. ++.+.+..+
T Consensus 47 V~iWd~~--tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~--~~~~~~~~l 122 (318)
T 4ggc_A 47 VYLWSAS--SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYIL 122 (318)
T ss_dssp EEEEETT--TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE--EEEEETTEE
T ss_pred EEEEECC--CCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEE--EeecCCCEE
Confidence 5666532 3344444 457889999999999999999999999999999999999999999876655 455566677
Q ss_pred EEecCCCCCceeEEEEccCC-ceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEE----Eec--Cc
Q 020021 92 IYSSKNGWDESLRLLSLHDN-KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL----RVQ--GR 164 (332)
Q Consensus 92 ~~~s~~g~d~~v~v~d~~~~-~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~----~~~--~~ 164 (332)
++++. ++.+++|+.... ..+..+.+|...+..+.+++++++|++++.|++|++||+++++..... ... ..
T Consensus 123 ~s~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v 199 (318)
T 4ggc_A 123 SSGSR---SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV 199 (318)
T ss_dssp EEEET---TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCE
T ss_pred EEEec---CCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCce
Confidence 77754 778999998765 457788999999999999999999999999999999999876532111 111 12
Q ss_pred eeEEEcC-CCeEEEEE---eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEc--CCCeEEEEEccCC
Q 020021 165 PAAAYDD-QGLVFAVA---FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT--MEGHIHVLDSFRG 238 (332)
Q Consensus 165 ~~~~~~~-~~~~~~~~---~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~--~dg~i~i~d~~~~ 238 (332)
....+.+ ...++..+ .++.|++||.+.... .....+...+..+.|+|++..+++++ .|+.|++||+.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~ 274 (318)
T 4ggc_A 200 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-----LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 274 (318)
T ss_dssp EEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE-----EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred EEEEecCCCCcEEEEEecCCCCEEEEEecccccc-----cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC
Confidence 2333333 33333322 358999999875432 11112345688899999999887654 7999999999999
Q ss_pred eEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCC
Q 020021 239 TLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283 (332)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~ 283 (332)
+++.++. .|...|.+++|+|||++|||||.||+|+|||+.+.
T Consensus 275 ~~~~~l~---gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 275 AKVAELK---GHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CEEEEEC---CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cEEEEEc---CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9998876 56788999999999999999999999999999764
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.4e-33 Score=254.24 Aligned_cols=253 Identities=13% Similarity=0.130 Sum_probs=208.1
Q ss_pred ccceeEeccCCCcEEEEEECCC----C---CEEEEEeCCCcEEEEEcCCCee-----eEEeeec-----ccceeEEEEc-
Q 020021 24 MEVGMSFRDYNGRISSMDFHKS----S---SYLVTASDDESIRLYDVTAATC-----LKTINSK-----KYGVDLVCFT- 85 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~d----g---~~l~tgs~D~tv~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~~- 85 (332)
.+....+.+|..+|.+++|+|+ + ++|++++.|++|++||+.++++ +..+..| ...|..++|+
T Consensus 52 ~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 131 (397)
T 1sq9_A 52 KDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 131 (397)
T ss_dssp GGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEEC
T ss_pred CCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEee
Confidence 4577889999999999999999 9 9999999999999999998887 8888888 5789999999
Q ss_pred ---cCCCE-EEEecCCCCCceeEEEEccC------CceEE-----Eee-------cccccEEEEEecCCCCeEEEeeCCC
Q 020021 86 ---SHPTT-VIYSSKNGWDESLRLLSLHD------NKYLR-----YFK-------GHHDRVVSLSLCSSKDCFISGSLDR 143 (332)
Q Consensus 86 ---~~~~~-~~~~s~~g~d~~v~v~d~~~------~~~~~-----~~~-------~h~~~V~~v~~~~~~~~l~s~s~Dg 143 (332)
+++.. +++++. |+.|++||+.. ++.+. .+. .|...|.+++|+|++ .|++++.|+
T Consensus 132 ~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg 207 (397)
T 1sq9_A 132 SNDRLLSHRLVATDV---KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG 207 (397)
T ss_dssp CC----CEEEEEEET---TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS
T ss_pred ccCCCCceEEEEEeC---CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC
Confidence 99988 887764 78999999988 66665 774 489999999999999 999999999
Q ss_pred cEEEEeCCCceEEEEEEe---c---C--ceeEEEcCCCeEE-EEEeC---CEEEEEECccCCCCCeeEEEecC-------
Q 020021 144 TVLLWDQRAEKCQGLLRV---Q---G--RPAAAYDDQGLVF-AVAFG---GYIRMFDARKYEKGPFDIFSVGG------- 204 (332)
Q Consensus 144 ~i~iWd~~~~~~~~~~~~---~---~--~~~~~~~~~~~~~-~~~~~---~~i~vwd~~~~~~~~~~~~~~~~------- 204 (332)
.|++||++++++...+.. + . .....+++++.++ +++.+ +.|++||++..+ ......+
T Consensus 208 ~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~----~~~~~~~~~~~~~~ 283 (397)
T 1sq9_A 208 TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE----RIGSLSVPTHSSQA 283 (397)
T ss_dssp EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC----EEEEECBC------
T ss_pred cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc----ccceeccCcccccc
Confidence 999999999888877765 2 2 3355677766544 45567 899999997642 1233334
Q ss_pred ------CCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecC---CC---------------CCcceEEEEC
Q 020021 205 ------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP---VS---------------RNSTLEASFS 260 (332)
Q Consensus 205 ------~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~---------------~~~~~~v~~s 260 (332)
+...+.+++|+|+++++++++.||.|++||+.+++.+..+.... .+ ...+..++|+
T Consensus 284 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 363 (397)
T 1sq9_A 284 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 363 (397)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEE
T ss_pred cccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEec
Confidence 66789999999999999999999999999999999888776210 22 6788999999
Q ss_pred CCC----------CEEEEEcCCCcEEEEECCCCc
Q 020021 261 PEG----------MFVISGSGDGSVYAWSVRSGK 284 (332)
Q Consensus 261 pdg----------~~l~sgs~Dg~i~vWd~~~~~ 284 (332)
|++ ++|++|+.||.|++||+.+++
T Consensus 364 ~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 364 KKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 999 799999999999999998764
No 90
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.8e-34 Score=263.38 Aligned_cols=269 Identities=12% Similarity=0.067 Sum_probs=181.1
Q ss_pred eccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeE-----EeeecccceeEEEEcc--------CCCEEEEecC
Q 020021 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK-----TINSKKYGVDLVCFTS--------HPTTVIYSSK 96 (332)
Q Consensus 30 l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~-----~~~~~~~~v~~~~~~~--------~~~~~~~~s~ 96 (332)
...|.+.+....+++++.+|++|+.|++|||||+.++++.. .+.+|...|..++|+| ++..+++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 85 ENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp CC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred ccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 34566666666677778899999999999999999887643 3568999999999987 5666777654
Q ss_pred CCCCceeEEEEccCCceEEEeecccccEEEEEecCCC-CeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeE
Q 020021 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLV 175 (332)
Q Consensus 97 ~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~-~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (332)
|++||+||+.++..+..+.+|...|.+++|+|++ .+|++++.|++|++||+++++........... .....
T Consensus 165 ---D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~-----~~~~~ 236 (393)
T 4gq1_A 165 ---DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV-----KNPWL 236 (393)
T ss_dssp ---TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C-----SCCCS
T ss_pred ---CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc-----ccceE
Confidence 9999999999998888899999999999999987 48999999999999999887654332111000 00000
Q ss_pred EEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEc-CCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC-----
Q 020021 176 FAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFS-NDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV----- 249 (332)
Q Consensus 176 ~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s-~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----- 249 (332)
+.. +... ........++...+..+.|+ |||+.+++++.|+++++||+..++....+..+..
T Consensus 237 ~s~---------~~~~----~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~ 303 (393)
T 4gq1_A 237 LTL---------NTLP----LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPK 303 (393)
T ss_dssp EEE---------ESGG----GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------
T ss_pred Eec---------cccc----ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccE
Confidence 000 0000 00011122455677888886 8999999999999999999987765544321100
Q ss_pred ----------CCCcceEEEECC--CCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce-EE
Q 020021 250 ----------SRNSTLEASFSP--EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE-LS 316 (332)
Q Consensus 250 ----------~~~~~~~v~~sp--dg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d-~~ 316 (332)
.........|+| ++.++++|+.||+|++||+.+++.+..+..|..+|.+|+|||||++|++++.+ +.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~ 383 (393)
T 4gq1_A 304 NLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVL 383 (393)
T ss_dssp CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEE
T ss_pred EEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 011112234444 56688899999999999999999888888899999999999999999999887 55
Q ss_pred Eec
Q 020021 317 FWI 319 (332)
Q Consensus 317 ~w~ 319 (332)
+|.
T Consensus 384 lvr 386 (393)
T 4gq1_A 384 LTR 386 (393)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.1e-33 Score=248.69 Aligned_cols=249 Identities=15% Similarity=0.187 Sum_probs=198.3
Q ss_pred ccCCCcEEEEEECCC---CCEEEEEeCCCcEEEEEcCCCe-eeEEeeecccceeEEE------EccCCCEEEEecCCCCC
Q 020021 31 RDYNGRISSMDFHKS---SSYLVTASDDESIRLYDVTAAT-CLKTINSKKYGVDLVC------FTSHPTTVIYSSKNGWD 100 (332)
Q Consensus 31 ~~h~~~I~~i~~s~d---g~~l~tgs~D~tv~iwd~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~~~~~s~~g~d 100 (332)
.+|.++|.+++|+|+ +++|++|+.|++|++||+.+++ ++..+..|...|..++ |++++..+++++. |
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~---d 138 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR---D 138 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET---T
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC---C
Confidence 379999999999998 6999999999999999999888 8888999998999885 4678888888764 7
Q ss_pred ceeEEEEccCCc-eEEEeecccc----cEEEEE----ecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec-CceeEEEc
Q 020021 101 ESLRLLSLHDNK-YLRYFKGHHD----RVVSLS----LCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-GRPAAAYD 170 (332)
Q Consensus 101 ~~v~v~d~~~~~-~~~~~~~h~~----~V~~v~----~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~-~~~~~~~~ 170 (332)
+.|++||+.+++ .+..+..|.. .|.++. |+|++++|++++.|+.|++||++++++....... ......++
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~ 218 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFD 218 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEES
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcC
Confidence 899999999876 6777776655 899998 7889999999999999999999998875544332 23456667
Q ss_pred C---CC-eEEEEEeCCEEEEEECccCCCCC-eeEEEecCCCCCceeEEEcCCCC-EEEEEcCCCeEEEEEccCCe-----
Q 020021 171 D---QG-LVFAVAFGGYIRMFDARKYEKGP-FDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGT----- 239 (332)
Q Consensus 171 ~---~~-~~~~~~~~~~i~vwd~~~~~~~~-~~~~~~~~~~~~v~~v~~s~dg~-~l~~~~~dg~i~i~d~~~~~----- 239 (332)
+ ++ .+++++.++.|++||++...... +......++...+..++|+|+++ ++++++.||.|++||+..+.
T Consensus 219 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 298 (357)
T 3i2n_A 219 RKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKK 298 (357)
T ss_dssp CSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--C
T ss_pred CCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccc
Confidence 6 44 45556668999999987643221 22223346777899999999998 89999999999999987643
Q ss_pred --------------EeEEeeecCCCCCcceEEEECCCCCEEE-EEcCCCcEEEEECCCCce
Q 020021 240 --------------LLSTYNVKPVSRNSTLEASFSPEGMFVI-SGSGDGSVYAWSVRSGKE 285 (332)
Q Consensus 240 --------------~~~~~~~~~~~~~~~~~v~~spdg~~l~-sgs~Dg~i~vWd~~~~~~ 285 (332)
.+..+. .|...+.+++|+|++++|+ +++.||.|++||+.+.+.
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 299 DSEGIEMGVAGSVSLLQNVT---LSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CTTSCCCCCCCEEEEEEEEE---CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cCCCCccccccccceeeccc---cCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 333333 4677899999999999998 899999999999987654
No 92
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.8e-32 Score=246.82 Aligned_cols=243 Identities=20% Similarity=0.221 Sum_probs=189.1
Q ss_pred eccCCCcEEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeeeEEeeecc---cceeEEEEccCCCEEEEecCCCCCceeEE
Q 020021 30 FRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSKK---YGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (332)
Q Consensus 30 l~~h~~~I~~i~~s~-dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~s~~g~d~~v~v 105 (332)
+.+|.+.|.+++|+| ++++|++++.|++|++||+.+ ..+..+..+. ..+..++|++++..+++++. |+.|++
T Consensus 114 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i 189 (383)
T 3ei3_B 114 GMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS---TGRLLL 189 (383)
T ss_dssp CCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEET---TSEEEE
T ss_pred cCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECC---CCCEEE
Confidence 347999999999999 679999999999999999985 5555555443 67999999999999988864 789999
Q ss_pred EEccCCceEEEeecccccEEEEEecCCCC-eEEEeeCCCcEEEEeCCC----ceEEEEEEec-CceeEEEcC-CCeEE-E
Q 020021 106 LSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRA----EKCQGLLRVQ-GRPAAAYDD-QGLVF-A 177 (332)
Q Consensus 106 ~d~~~~~~~~~~~~h~~~V~~v~~~~~~~-~l~s~s~Dg~i~iWd~~~----~~~~~~~~~~-~~~~~~~~~-~~~~~-~ 177 (332)
||+ +++.+..+.+|...|.+++|+|+++ +|++++.|++|++||+++ +.+...+... ......+++ ++.++ +
T Consensus 190 ~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~ 268 (383)
T 3ei3_B 190 LGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLT 268 (383)
T ss_dssp EET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEE
T ss_pred EEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEE
Confidence 999 5778899999999999999999998 999999999999999987 5555555322 234567777 66544 4
Q ss_pred EEeCCEEEEEECccCCCCCeeEEEe----cCCC----------CCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEE
Q 020021 178 VAFGGYIRMFDARKYEKGPFDIFSV----GGDI----------SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLST 243 (332)
Q Consensus 178 ~~~~~~i~vwd~~~~~~~~~~~~~~----~~~~----------~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~ 243 (332)
++.|+.|++||++....... .... ..+. ..+..++|+|||++ +++.|+.|++||+.+++.+..
T Consensus 269 ~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~ 345 (383)
T 3ei3_B 269 TDQRNEIRVYSSYDWSKPDQ-IIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQ 345 (383)
T ss_dssp EESSSEEEEEETTBTTSCSE-EEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEE
T ss_pred EcCCCcEEEEECCCCccccc-cccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeee
Confidence 55689999999987543211 1110 0111 23344667777766 778999999999999998887
Q ss_pred eeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 244 YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 244 ~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
+.... +...+..++|+|++++|++|+ ||.|++||+.+
T Consensus 346 l~~~~-~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 346 LRDPN-AAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp ECBTT-BCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred ecCCC-CCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 76421 345556679999999999997 99999999865
No 93
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.2e-31 Score=237.62 Aligned_cols=251 Identities=16% Similarity=0.223 Sum_probs=202.8
Q ss_pred cceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeE
Q 020021 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (332)
Q Consensus 25 ~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~ 104 (332)
...++|.+|...|.+++|+|++++|++++.|+.|++|+............+...+....+.+.+..+++++. |+.++
T Consensus 77 ~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~---d~~~~ 153 (340)
T 4aow_A 77 IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR---DKTIK 153 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEE
T ss_pred eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecC---CCeEE
Confidence 356789999999999999999999999999999999999999888888888778888899999999988764 78999
Q ss_pred EEEccCCce-EEEeecccccEEEEEecCCC--CeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCeEE-EE
Q 020021 105 LLSLHDNKY-LRYFKGHHDRVVSLSLCSSK--DCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVF-AV 178 (332)
Q Consensus 105 v~d~~~~~~-~~~~~~h~~~V~~v~~~~~~--~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~ 178 (332)
+||+..... ...+.+|...|..++|++++ ..+++++.|++|++||++++++...+..+. .....+++++.++ ++
T Consensus 154 ~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 233 (340)
T 4aow_A 154 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASG 233 (340)
T ss_dssp EECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEE
Confidence 999876543 44567899999999999864 478999999999999999998877665433 3356677776555 45
Q ss_pred EeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeec------CCCCC
Q 020021 179 AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK------PVSRN 252 (332)
Q Consensus 179 ~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~~~ 252 (332)
+.|+.|++||++.... ...... ...+..++|+|++.++ +++.|+.|++||+..+..+..+... ..+..
T Consensus 234 s~Dg~i~iwd~~~~~~----~~~~~~-~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~ 307 (340)
T 4aow_A 234 GKDGQAMLWDLNEGKH----LYTLDG-GDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 307 (340)
T ss_dssp ETTCEEEEEETTTTEE----EEEEEC-SSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCC
T ss_pred eCCCeEEEEEeccCce----eeeecC-CceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCC
Confidence 5689999999976431 222222 2468899999998765 5567999999999988877665421 24567
Q ss_pred cceEEEECCCCCEEEEEcCCCcEEEEECCCCc
Q 020021 253 STLEASFSPEGMFVISGSGDGSVYAWSVRSGK 284 (332)
Q Consensus 253 ~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~ 284 (332)
.+.+++|+|||++|++|+.||+|+|||+++|+
T Consensus 308 ~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 308 QCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 88999999999999999999999999999875
No 94
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.2e-32 Score=242.88 Aligned_cols=226 Identities=15% Similarity=0.173 Sum_probs=176.9
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCC--CCEEEEEeCCCcEEEEEcCCCe--eeEEeeecccceeEEEEccC--
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKS--SSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSH-- 87 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~d--g~~l~tgs~D~tv~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~-- 87 (332)
+++|+.--...++..+|.+|+++|.+++|+|+ +++|+||+.|++|+|||+.+++ ++..+..|...|..++|+|+
T Consensus 33 v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 112 (297)
T 2pm7_B 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY 112 (297)
T ss_dssp EEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGG
T ss_pred EEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCC
Confidence 44554222234667899999999999999864 8999999999999999999874 56677788889999999997
Q ss_pred CCEEEEecCCCCCceeEEEEccCCc--eEEEeecccccEEEEEecCC-------------CCeEEEeeCCCcEEEEeCCC
Q 020021 88 PTTVIYSSKNGWDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSS-------------KDCFISGSLDRTVLLWDQRA 152 (332)
Q Consensus 88 ~~~~~~~s~~g~d~~v~v~d~~~~~--~~~~~~~h~~~V~~v~~~~~-------------~~~l~s~s~Dg~i~iWd~~~ 152 (332)
+..+++++. |++|++||+.++. ....+.+|...|.+++|+|+ +++|++|+.|++|++||+++
T Consensus 113 g~~l~s~s~---d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~ 189 (297)
T 2pm7_B 113 GPMLLVASS---DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (297)
T ss_dssp CSEEEEEET---TSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEET
T ss_pred CcEEEEEEC---CCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcC
Confidence 677777754 8899999998753 24678899999999999996 46899999999999999765
Q ss_pred ceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCC---CEEEEEcCCCe
Q 020021 153 EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG---RLMLLTTMEGH 229 (332)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg---~~l~~~~~dg~ 229 (332)
+..... ....+.+|...|.+++|+|++ .++++++.|++
T Consensus 190 ~~~~~~---------------------------------------~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~ 230 (297)
T 2pm7_B 190 DAQTYV---------------------------------------LESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT 230 (297)
T ss_dssp TTTEEE---------------------------------------EEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred CCceEE---------------------------------------EEEEecCCCCceEEEEECCCCCCceEEEEEECCCc
Confidence 431100 011223566778999999995 89999999999
Q ss_pred EEEEEccCCeE--e-EEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 230 IHVLDSFRGTL--L-STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 230 i~i~d~~~~~~--~-~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
|++||+..+.. . ..+. ...+...+.+++|+|+|++||+++.||+|+||+...
T Consensus 231 v~iWd~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 231 CIIWTQDNEQGPWKKTLLK-EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEEEESSTTSCCEEEESS-SSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEEEeCCCCCccceeeee-cccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 99999876431 1 1121 123567788999999999999999999999999863
No 95
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-33 Score=258.98 Aligned_cols=263 Identities=11% Similarity=0.080 Sum_probs=203.9
Q ss_pred ccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC
Q 020021 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 110 (332)
Q Consensus 31 ~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~ 110 (332)
+.-+..|.+|+|+|||.++||+|.|++|+ |...++++ .+|...|..++|+|++ .++.+++|+.+.
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~~v~~V~FsPdg----------~~~~~~~~~~~~ 76 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSKNLFHVKEFPLE----------FENKLDFELAQQ 76 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGGGTEEEEEECCC----------CCCTTTTSCCCS
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCccEEEEEECCCC----------CcceEEEEeCCC
Confidence 56678899999999999999999999999 76666544 6899999999999987 145566665432
Q ss_pred CceEEEee-cccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC-------ceeEEEcCCCeEEEEEe-C
Q 020021 111 NKYLRYFK-GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-------RPAAAYDDQGLVFAVAF-G 181 (332)
Q Consensus 111 ~~~~~~~~-~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~ 181 (332)
. ..+. +|...|.+++|+|+|++||+++.||+|++||.+. +...+. +. ....+++|++.+++++. |
T Consensus 77 ~---~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D 150 (588)
T 2j04_A 77 N---GLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED 150 (588)
T ss_dssp S---CSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT
T ss_pred c---eEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC
Confidence 2 2233 5688999999999999999999999999999543 443333 22 44678889887666665 8
Q ss_pred CEEEEEECccCCC-CC--eeEEEe----cCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEe---EEeeecCCCC
Q 020021 182 GYIRMFDARKYEK-GP--FDIFSV----GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL---STYNVKPVSR 251 (332)
Q Consensus 182 ~~i~vwd~~~~~~-~~--~~~~~~----~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~ 251 (332)
|+|++||+..... .+ ...... ++|...|.+++||||| +++++.|+.|++||+..+... .++. ..|.
T Consensus 151 GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~--~~h~ 226 (588)
T 2j04_A 151 GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ--NASR 226 (588)
T ss_dssp SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE--CCCS
T ss_pred CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec--cccc
Confidence 9999999876432 01 122232 5677899999999999 788899999999999876632 2332 2456
Q ss_pred CcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEe--CCCeeEEEeccceE-EEeccc
Q 020021 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKW--TPGSLMFVTGSSEL-SFWIPD 321 (332)
Q Consensus 252 ~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~--sp~~~~l~t~~~d~-~~w~~~ 321 (332)
..|.+++|+ |++||+++ |++|++||+.+++......+|.+.+..++| +||+..+++++.+- ++|..+
T Consensus 227 ~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw~~d 296 (588)
T 2j04_A 227 RKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSYKVLLED 296 (588)
T ss_dssp SCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEEEEEESS
T ss_pred CcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEEeec
Confidence 788999999 68999997 699999999887764444489999999999 99999999998764 488653
No 96
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-31 Score=239.61 Aligned_cols=261 Identities=15% Similarity=0.134 Sum_probs=213.3
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIY 93 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 93 (332)
+.+|+ +...+....+.+|.+.|.+++|+|++++|++++.|++|++||+.+++++..+. +...+..++|++++..+++
T Consensus 56 i~vwd--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~ 132 (369)
T 3zwl_B 56 ASVWY--SLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLA 132 (369)
T ss_dssp EEEEE--TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEE
T ss_pred EEEEe--CCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEE
Confidence 44444 23456778899999999999999999999999999999999999999998887 6778999999999999988
Q ss_pred ecCC--CCCceeEEEEccCCc-----------eEEEeecccc--cEEEEEecCCCCeEEEeeCCCcEEEEeCCC-ceEEE
Q 020021 94 SSKN--GWDESLRLLSLHDNK-----------YLRYFKGHHD--RVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQG 157 (332)
Q Consensus 94 ~s~~--g~d~~v~v~d~~~~~-----------~~~~~~~h~~--~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~-~~~~~ 157 (332)
+..+ +.++.+++||+..+. .+..+..|.. .+.+++|+|+++.|++++.||.|++||+++ .....
T Consensus 133 ~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 212 (369)
T 3zwl_B 133 ILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVD 212 (369)
T ss_dssp EECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEE
T ss_pred ecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEE
Confidence 7642 123799999987653 3455666776 999999999999999999999999999988 66666
Q ss_pred EEEecC--ceeEEEcCCCeEEE-EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCC------
Q 020021 158 LLRVQG--RPAAAYDDQGLVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG------ 228 (332)
Q Consensus 158 ~~~~~~--~~~~~~~~~~~~~~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg------ 228 (332)
.+..+. .....+++++.+++ ++.++.|++||++... ....+. +...+..++|+|+++++++++.++
T Consensus 213 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 287 (369)
T 3zwl_B 213 SIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ--VLKKYE---TDCPLNTAVITPLKEFIILGGGQEAKDVTT 287 (369)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEE---CSSCEEEEEECSSSSEEEEEECCC------
T ss_pred EEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCc--eeeeec---CCCCceeEEecCCCceEEEeecCCCceEEE
Confidence 665432 34567777775544 5568999999997643 122222 345788999999999999999988
Q ss_pred --------eEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCce
Q 020021 229 --------HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE 285 (332)
Q Consensus 229 --------~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~ 285 (332)
.+++||..+++.+..+. .|...+..++|+|++++|++++.||.|++|++.++..
T Consensus 288 ~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 288 TSANEGKFEARFYHKIFEEEIGRVQ---GHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp -------CEEEEEETTTCCEEEEEE---CCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred EecCCCcceeEEEecCCCcchhhee---cccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 89999999999887776 4667889999999999999999999999999987554
No 97
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.2e-32 Score=255.45 Aligned_cols=252 Identities=13% Similarity=0.257 Sum_probs=206.0
Q ss_pred eEeccCCCcEEEEEECCC-CCEEEEEeCCCcEEEEEcCC----------CeeeEEeeecccceeEEEEccCCC-EEEEec
Q 020021 28 MSFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTA----------ATCLKTINSKKYGVDLVCFTSHPT-TVIYSS 95 (332)
Q Consensus 28 ~~l~~h~~~I~~i~~s~d-g~~l~tgs~D~tv~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~s 95 (332)
..+.+|.+.|++++|+|+ +.+|++++.|++|+|||+.+ ...+..+..|...+..++|++.+. .+++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 446789999999999998 68999999999999999986 567788889999999999999988 677665
Q ss_pred CCCCCceeEEEEccCCce-------EEEeecccccEEEEEecC-CCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeE
Q 020021 96 KNGWDESLRLLSLHDNKY-------LRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAA 167 (332)
Q Consensus 96 ~~g~d~~v~v~d~~~~~~-------~~~~~~h~~~V~~v~~~~-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~ 167 (332)
. |+.|++||+..+.. ...+.+|...|.+++|+| ++..|++++.|+.|++||++++... .
T Consensus 202 ~---dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~-------~--- 268 (430)
T 2xyi_A 202 D---DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS-------K--- 268 (430)
T ss_dssp T---TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS-------S---
T ss_pred C---CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC-------c---
Confidence 3 88999999987322 456779999999999999 6789999999999999999865210 0
Q ss_pred EEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCC-EEEEEcCCCeEEEEEccC-CeEeEEee
Q 020021 168 AYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFR-GTLLSTYN 245 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~~~~~dg~i~i~d~~~-~~~~~~~~ 245 (332)
.. .....+...+++++|+|++. ++++++.||.|++||++. ...+..+.
T Consensus 269 ----------------------------~~--~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~ 318 (430)
T 2xyi_A 269 ----------------------------PS--HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE 318 (430)
T ss_dssp ----------------------------CS--EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred ----------------------------ce--eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee
Confidence 00 00112445688999999997 788999999999999987 45555555
Q ss_pred ecCCCCCcceEEEECCCCC-EEEEEcCCCcEEEEECCC--------------CceEEEecCCCCCCceEEeCCCee-EEE
Q 020021 246 VKPVSRNSTLEASFSPEGM-FVISGSGDGSVYAWSVRS--------------GKEVASWMSFDTEPPVIKWTPGSL-MFV 309 (332)
Q Consensus 246 ~~~~~~~~~~~v~~spdg~-~l~sgs~Dg~i~vWd~~~--------------~~~~~~~~~~~~~v~~l~~sp~~~-~l~ 309 (332)
.|...+.+++|+|+++ +|++++.||.|+|||+.. .+.+..+..|...|.+++|+|++. +++
T Consensus 319 ---~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 395 (430)
T 2xyi_A 319 ---SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIIC 395 (430)
T ss_dssp ---CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEE
T ss_pred ---cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEE
Confidence 4567899999999995 799999999999999976 255677788999999999999998 888
Q ss_pred eccce--EEEeccccccc
Q 020021 310 TGSSE--LSFWIPDLSKL 325 (332)
Q Consensus 310 t~~~d--~~~w~~~~~~~ 325 (332)
+++.| +++|.++...+
T Consensus 396 s~s~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 396 SVSEDNIMQVWQMAENVY 413 (430)
T ss_dssp EEETTSEEEEEEECHHHH
T ss_pred EEECCCCEEEeEcccccc
Confidence 88876 88898765433
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-33 Score=259.83 Aligned_cols=288 Identities=13% Similarity=0.228 Sum_probs=210.2
Q ss_pred eeEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEe-eecccceeEEEEcc-CCCE
Q 020021 13 SLELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI-NSKKYGVDLVCFTS-HPTT 90 (332)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~ 90 (332)
+++.-+..|..++..-.++... .|+|++..+++++ .|+ .+++++..+ .+|...|..++|++ ++..
T Consensus 12 ~~~~~~~~l~~~~~~p~~~~~~------~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~ 78 (437)
T 3gre_A 12 DVESIEKFLSTFKILPPLRDYK------EFGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPY 78 (437)
T ss_dssp --CCCGGGTTCC-CCCCGGGCG------GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCE
T ss_pred ChhHHHHHhccCCCCCChhchh------hcCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCE
Confidence 3344445555555444443332 3788888888776 387 457888888 78889999999999 8888
Q ss_pred EEEecCCCCCceeEEEEccC---Cc---eEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCC---CceEEEEEEe
Q 020021 91 VIYSSKNGWDESLRLLSLHD---NK---YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR---AEKCQGLLRV 161 (332)
Q Consensus 91 ~~~~s~~g~d~~v~v~d~~~---~~---~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~---~~~~~~~~~~ 161 (332)
+++++. |++|++||+.+ +. ....+ +|...|++++|+|++++|++++.||+|++||+. .+++......
T Consensus 79 l~s~s~---dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 154 (437)
T 3gre_A 79 LITGSD---QGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC 154 (437)
T ss_dssp EEEEET---TSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEecC---CceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc
Confidence 888864 88999999876 43 22333 599999999999999999999999999999984 4444333221
Q ss_pred cCce--------------eEE--EcCCCe-EEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEE
Q 020021 162 QGRP--------------AAA--YDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT 224 (332)
Q Consensus 162 ~~~~--------------~~~--~~~~~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~ 224 (332)
.... ... +.+++. +++++.|+.|++||++..+ ....+....+...+.+++|+|++++++++
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 232 (437)
T 3gre_A 155 ECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE--RLQIIENSPRHGAVSSICIDEECCVLILG 232 (437)
T ss_dssp EEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC--EEEEEECCGGGCCEEEEEECTTSCEEEEE
T ss_pred ceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe--eeEEEccCCCCCceEEEEECCCCCEEEEE
Confidence 1111 111 234454 5555568999999998643 12222221256789999999999999999
Q ss_pred cCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEE----CCCCCEEEEEcCCCcEEEEECCCCceEEEecCC--------
Q 020021 225 TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF----SPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF-------- 292 (332)
Q Consensus 225 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~----spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~-------- 292 (332)
+.||.|++||+++++.+..+.. .+...+.+++| +|++++|++|+.||+|++||+.+++.+..+..|
T Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 310 (437)
T 3gre_A 233 TTRGIIDIWDIRFNVLIRSWSF--GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEH 310 (437)
T ss_dssp ETTSCEEEEETTTTEEEEEEBC--TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGG
T ss_pred cCCCeEEEEEcCCccEEEEEec--CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccce
Confidence 9999999999999988877653 24457888855 467889999999999999999999887776644
Q ss_pred ------------------CCCCceEEeCCCeeEEEeccce--EEEecccc
Q 020021 293 ------------------DTEPPVIKWTPGSLMFVTGSSE--LSFWIPDL 322 (332)
Q Consensus 293 ------------------~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~ 322 (332)
...|++++|+ ++++|++++.| +++|+...
T Consensus 311 ~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 311 FLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp GSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTC
T ss_pred ecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCC
Confidence 4446777888 66889999877 88888644
No 99
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-31 Score=236.43 Aligned_cols=255 Identities=18% Similarity=0.235 Sum_probs=206.5
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCC---eeeEEeeecccceeEEEEccCCCE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA---TCLKTINSKKYGVDLVCFTSHPTT 90 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~ 90 (332)
+.+|+- ...+....+..|.+.|.+++|+|++++|++++.|+.+++|++... +++..+..|...+..++| ++..
T Consensus 41 v~vw~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~ 116 (313)
T 3odt_A 41 VRLWSK--DDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGV 116 (313)
T ss_dssp EEEEEE--SSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTE
T ss_pred EEEEEC--CCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCE
Confidence 445543 445667788999999999999999999999999999999998754 567778888888988888 5667
Q ss_pred EEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecC-CCCeEEEeeCCCcEEEEeCCCceEEEEEEe-c--Ccee
Q 020021 91 VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRV-Q--GRPA 166 (332)
Q Consensus 91 ~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-~--~~~~ 166 (332)
+++++. |+.+++|| .++.+..+.+|...|.++.|+| +++.+++++.|+.|++||. ++....+.. . ....
T Consensus 117 l~~~~~---d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~ 189 (313)
T 3odt_A 117 VISGSW---DKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRH 189 (313)
T ss_dssp EEEEET---TSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEE
T ss_pred EEEEeC---CCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEE
Confidence 777764 88999999 6778888999999999999988 8999999999999999994 334444432 1 2345
Q ss_pred EEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeee
Q 020021 167 AAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV 246 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 246 (332)
..+.+++.+++++.++.|++||++..+ ......++...+.+++|+|++ .+++++.||.|++||+.+++.+..+.
T Consensus 190 ~~~~~~~~~~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~- 263 (313)
T 3odt_A 190 LAVVDDGHFISCSNDGLIKLVDMHTGD----VLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVIT- 263 (313)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEE-
T ss_pred EEEcCCCeEEEccCCCeEEEEECCchh----hhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEe-
Confidence 566777777778889999999997643 233344667789999999999 58899999999999999999888776
Q ss_pred cCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEE
Q 020021 247 KPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVAS 288 (332)
Q Consensus 247 ~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~ 288 (332)
.+...+..++|+|+++ +++++.||.|++||+.+++.+..
T Consensus 264 --~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 264 --LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp --CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred --ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 3556888999999999 55789999999999988776543
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-31 Score=249.39 Aligned_cols=279 Identities=11% Similarity=0.006 Sum_probs=216.0
Q ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCe---eeEEeeecc-----------------------------------
Q 020021 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAAT---CLKTINSKK----------------------------------- 76 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~---~~~~~~~~~----------------------------------- 76 (332)
.++.+++|+|+|++|+++ .++.|++||+.+++ .+..+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578999999999976655 57899999999998 666655322
Q ss_pred -------------------cceeEEEEccCCCEE-EEecCCCCCceeEEEEcc--CCceEEEee--cccccEEEEEecCC
Q 020021 77 -------------------YGVDLVCFTSHPTTV-IYSSKNGWDESLRLLSLH--DNKYLRYFK--GHHDRVVSLSLCSS 132 (332)
Q Consensus 77 -------------------~~v~~~~~~~~~~~~-~~~s~~g~d~~v~v~d~~--~~~~~~~~~--~h~~~V~~v~~~~~ 132 (332)
..|..++|+|++..+ ++++ .|+.|++||+. +++.+..+. .|...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACAD---SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEG---GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEEC---CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 258899999999986 5554 38899999999 888888886 56789999999999
Q ss_pred CCeEEEeeCCCcEEEEeCCCceEEE----EEEec--CceeEEEcCC---Ce-EEEEEeCCEEEEEECccCCCCCeeEEEe
Q 020021 133 KDCFISGSLDRTVLLWDQRAEKCQG----LLRVQ--GRPAAAYDDQ---GL-VFAVAFGGYIRMFDARKYEKGPFDIFSV 202 (332)
Q Consensus 133 ~~~l~s~s~Dg~i~iWd~~~~~~~~----~~~~~--~~~~~~~~~~---~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~~ 202 (332)
+++|++++.||.+++|++.++.... .+..+ ......++++ +. +++++.|+.|++||++... ......
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~---~~~~~~ 237 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF---IVDKWL 237 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT---CEEEEC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc---eeeeee
Confidence 9999999999999999987765432 33322 2335566676 64 5556668999999987542 111123
Q ss_pred cCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecC----------------------CCCCcceEEEEC
Q 020021 203 GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP----------------------VSRNSTLEASFS 260 (332)
Q Consensus 203 ~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------------------~~~~~~~~v~~s 260 (332)
.+|...+.+++|+ +|+++++++.|+.|++||+.+++.+..+.... .....+..++|+
T Consensus 238 ~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 238 FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 4677789999999 99999999999999999999999887765321 122456789999
Q ss_pred CCCCEEEEEc-CCCcEEEEEC--CCC---ceEEEecCCCCCCceEEeCCCeeEEEeccce--------EEEecccc
Q 020021 261 PEGMFVISGS-GDGSVYAWSV--RSG---KEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--------LSFWIPDL 322 (332)
Q Consensus 261 pdg~~l~sgs-~Dg~i~vWd~--~~~---~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--------~~~w~~~~ 322 (332)
|++++|++++ .|+.|+||++ .++ +.+..+..| ..+.+++|+|++.+++.++.+ +.+|..+.
T Consensus 317 ~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 317 KNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp SSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred CCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 9999999998 8999999999 555 556667777 789999999976666555432 68886543
No 101
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-33 Score=249.19 Aligned_cols=258 Identities=12% Similarity=0.106 Sum_probs=187.2
Q ss_pred EECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEcc---------CC
Q 020021 41 DFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH---------DN 111 (332)
Q Consensus 41 ~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~---------~~ 111 (332)
++.+++.+|++|+.|++|++||+.+++++..+. ...|..+.++|. +++++ .|+++++|+.. ++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s---~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRG---PCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEEC---STTEEEEEETTTEEEEEETTTC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEec---CCCeEEEEEccCceEEeecCCc
Confidence 345678999999999999999999999888776 345666667766 66554 38899999655 44
Q ss_pred ceEEEee-cccccEEEEEecC--CCCeEEEeeCCCcEEEEeCCCceEEEEEEec---CceeEEEcCCCeEEEEE-eCCEE
Q 020021 112 KYLRYFK-GHHDRVVSLSLCS--SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ---GRPAAAYDDQGLVFAVA-FGGYI 184 (332)
Q Consensus 112 ~~~~~~~-~h~~~V~~v~~~~--~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i 184 (332)
+.+..+. +|.++|.+++|+| ++++|++++.||+|++||++++++....... ......+++++.+++++ .|+.|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i 194 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL 194 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 4444444 6778999999999 9999999999999999999998875544322 23467788888777764 68999
Q ss_pred EEEECccCCCCCeeEEEecC-CCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcc--eEEEECC
Q 020021 185 RMFDARKYEKGPFDIFSVGG-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNST--LEASFSP 261 (332)
Q Consensus 185 ~vwd~~~~~~~~~~~~~~~~-~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--~~v~~sp 261 (332)
++||++..+... ....+ |...+.+++|+|+|.++++++ ++.|++||+++++.+..+.....+...+ ..++|+|
T Consensus 195 ~iwd~~~~~~~~---~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 195 DVYNLSSPDQAS---SRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp EEEESSCTTSCC---EECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT
T ss_pred EEEECCCCCCCc---cEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECC
Confidence 999998754321 12334 678999999999999999999 5599999999887654433211122222 3599999
Q ss_pred CCCEEEEEcC-CCcEEEEECCCCceEEEecCCCCCCceEEeCC---CeeEEEeccce
Q 020021 262 EGMFVISGSG-DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP---GSLMFVTGSSE 314 (332)
Q Consensus 262 dg~~l~sgs~-Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp---~~~~l~t~~~d 314 (332)
+|++|++++. |+.|+||++.+....... .++..++|+| +.+.+++++.|
T Consensus 271 ~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d 323 (343)
T 3lrv_A 271 SGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGD 323 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEET
T ss_pred CCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecC
Confidence 9999999988 999999999765443322 2344556666 55555555544
No 102
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=6.6e-31 Score=242.83 Aligned_cols=284 Identities=13% Similarity=0.176 Sum_probs=221.3
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEE-----eeecccceeEEEEccCCCEEEEecCCC
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT-----INSKKYGVDLVCFTSHPTTVIYSSKNG 98 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~s~~g 98 (332)
++....+..+.. +.+++|+|++.++++++.|++|++||+.+++.+.. +..|...+..++|++++..+++++.
T Consensus 113 ~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~-- 189 (433)
T 3bws_A 113 HRFISRFKTGFQ-PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ-- 189 (433)
T ss_dssp EEEEEEEECSSC-BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG--
T ss_pred ceEEEEEcCCCC-ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC--
Confidence 355556666554 45899999888889999999999999999988873 3456667889999888877777653
Q ss_pred CCceeEEEEccCCceEEEeecccccEEEEEecCCCCeE-EEeeCCCcEEEEeCCCceEEEEEEecCc-eeEEEcCCCeEE
Q 020021 99 WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF-ISGSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGLVF 176 (332)
Q Consensus 99 ~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l-~s~s~Dg~i~iWd~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 176 (332)
|+.|++||+.+++.+..+..|...+.+++|+|+++.+ ++++.|++|++||+++++....+..... ....+++++..+
T Consensus 190 -d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l 268 (433)
T 3bws_A 190 -ANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKEL 268 (433)
T ss_dssp -GTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEE
T ss_pred -CCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEE
Confidence 7899999999999999999999999999999999977 5556899999999998887666544333 345677777544
Q ss_pred -EEEe--------CCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCE-EEEEcCCCeEEEEEccCCeEeEEeee
Q 020021 177 -AVAF--------GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRL-MLLTTMEGHIHVLDSFRGTLLSTYNV 246 (332)
Q Consensus 177 -~~~~--------~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~-l~~~~~dg~i~i~d~~~~~~~~~~~~ 246 (332)
+++. ++.|++||++..+. .... .+...+..++|+|+|+. +++++.++.|++||+.+++.+..+.
T Consensus 269 ~~~~~~~~~~~~~dg~i~~~d~~~~~~--~~~~---~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~- 342 (433)
T 3bws_A 269 YIAQFSASNQESGGGRLGIYSMDKEKL--IDTI---GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP- 342 (433)
T ss_dssp EEEEEESCTTCSCCEEEEEEETTTTEE--EEEE---EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-
T ss_pred EEEECCCCccccCCCeEEEEECCCCcE--Eeec---cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-
Confidence 4442 67999999875421 1111 12235678999999974 5667999999999999998877664
Q ss_pred cCCCCCcceEEEECCCCCEEEEEcC---------------CCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEec
Q 020021 247 KPVSRNSTLEASFSPEGMFVISGSG---------------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 311 (332)
Q Consensus 247 ~~~~~~~~~~v~~spdg~~l~sgs~---------------Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~ 311 (332)
+...+..++|+|||++|++++. ||.|++||+.+++.+..+..+ ..+..++|+|++++|+++
T Consensus 343 ---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 343 ---VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp ---CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEE
T ss_pred ---CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEE
Confidence 2355778999999999998876 579999999999888877654 468999999999888766
Q ss_pred cc-e--EEEeccc
Q 020021 312 SS-E--LSFWIPD 321 (332)
Q Consensus 312 ~~-d--~~~w~~~ 321 (332)
+. | +.+|+.+
T Consensus 419 ~~~d~~i~v~~~~ 431 (433)
T 3bws_A 419 DFLDHQIRVYRRD 431 (433)
T ss_dssp ETTTTEEEEEEET
T ss_pred ECCCCeEEEEEec
Confidence 43 4 7788764
No 103
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-31 Score=239.17 Aligned_cols=251 Identities=11% Similarity=0.221 Sum_probs=196.5
Q ss_pred CeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEcc--CCceEEEeecccccEEEEEecCC--CCeEEEeeC
Q 020021 66 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DNKYLRYFKGHHDRVVSLSLCSS--KDCFISGSL 141 (332)
Q Consensus 66 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~--~~~~~~~~~~h~~~V~~v~~~~~--~~~l~s~s~ 141 (332)
|+++..+.+|...|..++|++++..+++++. |+.|++||+. +++.+..+.+|...|++++|+++ +++|++++.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSS---DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEET---TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEEC---CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc
Confidence 3566778899999999999999999988864 7899999998 55677889999999999999977 899999999
Q ss_pred CCcEEEEeCCCceE--EEEEEec--CceeEEEcCC--C-eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEE
Q 020021 142 DRTVLLWDQRAEKC--QGLLRVQ--GRPAAAYDDQ--G-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKF 214 (332)
Q Consensus 142 Dg~i~iWd~~~~~~--~~~~~~~--~~~~~~~~~~--~-~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~ 214 (332)
||+|++||+++++. ...+..+ ......+++. + .+++++.|+.|++||++...... ......+...+.+++|
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVNSASW 155 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC--EEEEECCTTCEEEEEE
T ss_pred CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee--eEEecCCCCceEEEEE
Confidence 99999999988863 3333222 2345566665 5 45556678999999998653322 2334456678999999
Q ss_pred cC-------------CCCEEEEEcCCCeEEEEEccCCeEeEEe-eecCCCCCcceEEEECCC---CCEEEEEcCCCcEEE
Q 020021 215 SN-------------DGRLMLLTTMEGHIHVLDSFRGTLLSTY-NVKPVSRNSTLEASFSPE---GMFVISGSGDGSVYA 277 (332)
Q Consensus 215 s~-------------dg~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~~~~v~~spd---g~~l~sgs~Dg~i~v 277 (332)
+| ++.++++++.||.|++||+.++...... .....|...+.+++|+|+ +++|++++.||.|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~i 235 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 235 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEE
Confidence 99 7999999999999999999876432111 111246778999999999 999999999999999
Q ss_pred EECCCCce-----EEEecCCCCCCceEEeCCCeeEEEeccce--EEEeccc
Q 020021 278 WSVRSGKE-----VASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 321 (332)
Q Consensus 278 Wd~~~~~~-----~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~ 321 (332)
||+.++.. +.....|...+.+++|+|++++|++++.| +++|+..
T Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 236 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred EeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 99988642 22223478889999999999999998877 8888875
No 104
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-32 Score=250.25 Aligned_cols=241 Identities=14% Similarity=0.095 Sum_probs=185.5
Q ss_pred eecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCC--ceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeC
Q 020021 73 NSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN--KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQ 150 (332)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~--~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~ 150 (332)
..+..+|..++|+|+++.+++++ .|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~---~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTT---ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCC---SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred ecCCCcEEEEEECCCCCEEEEec---CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 34556799999999999888764 3889999999988 678889999999999999999999999999999999999
Q ss_pred CCce---EEEEEEec--CceeEEEcCCCe-EEEEEeCCEEEEEECccCCCCCeeEEEecC-CCCCceeEEEcCCCCEEEE
Q 020021 151 RAEK---CQGLLRVQ--GRPAAAYDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVGG-DISDANVVKFSNDGRLMLL 223 (332)
Q Consensus 151 ~~~~---~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~-~~~~v~~v~~s~dg~~l~~ 223 (332)
+++. +...+..+ ......+++++. +++++.|+.|++||++....-.. ...+.+ +...+.+++|+|+++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV-SKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC-CEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee-eeEeecccCCCeEEEEEcCCCCEEEE
Confidence 8876 22222222 233556667664 55566789999999976432111 122333 6778999999999999999
Q ss_pred EcCCCeEEEEEccC------------------CeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCce
Q 020021 224 TTMEGHIHVLDSFR------------------GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE 285 (332)
Q Consensus 224 ~~~dg~i~i~d~~~------------------~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~ 285 (332)
++.|+.|++||+.. ++++..+ .|...+.+++|+|++++|++++.||+|++||+.+++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY----PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC----CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc----cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 99999999999853 3333333 4667899999999999999999999999999999887
Q ss_pred ----EEEecCCCCCCceEEeCCCeeEEEeccce-EEEeccc
Q 020021 286 ----VASWMSFDTEPPVIKWTPGSLMFVTGSSE-LSFWIPD 321 (332)
Q Consensus 286 ----~~~~~~~~~~v~~l~~sp~~~~l~t~~~d-~~~w~~~ 321 (332)
+..+..|...+.+++|+|++++|++++.+ +.+|...
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred cceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 77788999999999999999999999877 5566554
No 105
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.9e-31 Score=238.83 Aligned_cols=245 Identities=13% Similarity=0.103 Sum_probs=201.6
Q ss_pred eeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCc--eEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEe
Q 020021 72 INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD 149 (332)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~--~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd 149 (332)
+..|..+|..++|++++..+++++. |+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||+|++||
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPN---NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECS---SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeC---CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 3457778999999999999888754 8899999999987 8889999999999999999999999999999999999
Q ss_pred CCCceEEEEEEec----CceeEEEcCCCeEEE-EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEE
Q 020021 150 QRAEKCQGLLRVQ----GRPAAAYDDQGLVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT 224 (332)
Q Consensus 150 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~ 224 (332)
+++++....+... ......+++++.+++ ++.++.|++||++.............++...+.+++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 9888765544322 233566777665554 55689999999876432111122234556789999999999999999
Q ss_pred cCCCeEEEEEcc------------------CCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceE
Q 020021 225 TMEGHIHVLDSF------------------RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV 286 (332)
Q Consensus 225 ~~dg~i~i~d~~------------------~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~ 286 (332)
+.||.|++||+. .++.+..+. .+...+..++|+|++++|++++.||.|++||+.+++.+
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS---SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC---CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecC---CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 999999999953 566666554 45678889999999999999999999999999999999
Q ss_pred EEecCCCCCCceEEeCCCeeEEEeccce-EEEecccc
Q 020021 287 ASWMSFDTEPPVIKWTPGSLMFVTGSSE-LSFWIPDL 322 (332)
Q Consensus 287 ~~~~~~~~~v~~l~~sp~~~~l~t~~~d-~~~w~~~~ 322 (332)
..+..|...+.+++|+|++++++++... +.+|+...
T Consensus 238 ~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 238 ATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred EEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 9999999999999999999999888443 89998765
No 106
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.3e-32 Score=253.85 Aligned_cols=264 Identities=16% Similarity=0.208 Sum_probs=185.9
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeeeEEeeec--ccceeEEEEccCCCE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSK--KYGVDLVCFTSHPTT 90 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~-dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~ 90 (332)
+.||+--.........+.+|.++|++|+|+| ++++|+|||.|++|+|||+.++........+ ...+..++|++++..
T Consensus 144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRM 223 (435)
T ss_dssp EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTE
T ss_pred EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCE
Confidence 5666543344445556789999999999998 6899999999999999999876544333333 234677899999999
Q ss_pred EEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCC-eEEEeeCCCcEEEEeCCCceEEEEEE---ec--Cc
Q 020021 91 VIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLR---VQ--GR 164 (332)
Q Consensus 91 ~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~---~~--~~ 164 (332)
+++++. |+.|++||+.. +.+..+.+|...|++++|+|+++ +|++++.|++|++||+++.+....+. .+ ..
T Consensus 224 l~~g~~---dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v 299 (435)
T 4e54_B 224 VVTGDN---VGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPV 299 (435)
T ss_dssp EEEECS---SSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCE
T ss_pred EEEEeC---CCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccc
Confidence 988764 88999999864 56778899999999999999876 78899999999999998765433221 11 22
Q ss_pred eeEEEcCCCe-EEEEEeCCEEEEEECccCCCCCeeEEEec---CCCCCceeEEEcCCCCEEEEEc------------CCC
Q 020021 165 PAAAYDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFSVG---GDISDANVVKFSNDGRLMLLTT------------MEG 228 (332)
Q Consensus 165 ~~~~~~~~~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~~~---~~~~~v~~v~~s~dg~~l~~~~------------~dg 228 (332)
..+.+++++. +++++.|+.|++||++..... ....... ........+.++|++.+++++. .++
T Consensus 300 ~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 378 (435)
T 4e54_B 300 NAACFSPDGARLLTTDQKSEIRVYSASQWDCP-LGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELR 378 (435)
T ss_dssp EECCBCTTSSEEEEEESSSCEEEEESSSSSSE-EEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCC
T ss_pred cceeECCCCCeeEEEcCCCEEEEEECCCCccc-eEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCC
Confidence 3456677665 555667899999999864321 0000000 0001122344555555555443 345
Q ss_pred eEEEEEccCCeEeEEeeecCCCCCcceEE-EECCCCCEEEEEcCCCcEEEEECCCCce
Q 020021 229 HIHVLDSFRGTLLSTYNVKPVSRNSTLEA-SFSPEGMFVISGSGDGSVYAWSVRSGKE 285 (332)
Q Consensus 229 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v-~~spdg~~l~sgs~Dg~i~vWd~~~~~~ 285 (332)
.|++||..+++.+..+.. .+...+.++ +|+|||++|++|+ |++|+|||+++++.
T Consensus 379 ~i~iwd~~~g~~~~~l~~--~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 379 TIDVFDGNSGKMMCQLYD--PESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CEEEECSSSCCEEEEECC--SSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred EEEEEECCCCcEEEEEeC--CCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 799999999998876542 345566666 7999999999986 88999999988764
No 107
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.1e-31 Score=247.18 Aligned_cols=259 Identities=19% Similarity=0.307 Sum_probs=196.5
Q ss_pred hcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCc
Q 020021 22 QSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE 101 (332)
Q Consensus 22 ~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~ 101 (332)
...+..+.+.+|.+.|.+++| ++++|++|+.|++|++||+.+++++.++..|...|..++|+ +..+++++. |+
T Consensus 161 ~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~---dg 233 (435)
T 1p22_A 161 NTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSK---DR 233 (435)
T ss_dssp SSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEET---TS
T ss_pred CCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeC---CC
Confidence 346677889999999999998 68899999999999999999999999999999889888886 457777754 88
Q ss_pred eeEEEEccCCceE---EEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCce--eEEEcCCCeEE
Q 020021 102 SLRLLSLHDNKYL---RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVF 176 (332)
Q Consensus 102 ~v~v~d~~~~~~~---~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 176 (332)
.|++||+.+++.. ..+.+|...|.+++| ++++|++++.||+|++||++++++...+..+... ...+ .+..++
T Consensus 234 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~ 310 (435)
T 1p22_A 234 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVV 310 (435)
T ss_dssp CEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE-ETTEEE
T ss_pred cEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe-CCCEEE
Confidence 9999999887754 678899999999999 6789999999999999999999888777654332 2233 345666
Q ss_pred EEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCe---------EeEEeeec
Q 020021 177 AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT---------LLSTYNVK 247 (332)
Q Consensus 177 ~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~ 247 (332)
+++.|+.|++||++... ......++...+.++++ ++.++++++.||.|++||+.++. .+..+.
T Consensus 311 ~g~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-- 382 (435)
T 1p22_A 311 SGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV-- 382 (435)
T ss_dssp EEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC--
T ss_pred EEeCCCeEEEEECCCCC----EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeecc--
Confidence 77779999999998642 23345567778888887 88999999999999999987655 555554
Q ss_pred CCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeC
Q 020021 248 PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWT 302 (332)
Q Consensus 248 ~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~s 302 (332)
.|...+.+++| ++++|++|+.||+|++||+.+......... ..+...+.|.
T Consensus 383 -~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~ 433 (435)
T 1p22_A 383 -EHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP-RSPSRTYTYI 433 (435)
T ss_dssp -CCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----------------------
T ss_pred -CCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCCC-CCCccceeee
Confidence 46678888998 889999999999999999987665443322 2234445554
No 108
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.4e-30 Score=228.19 Aligned_cols=266 Identities=12% Similarity=0.170 Sum_probs=180.3
Q ss_pred eeEecHHHH-hcccceeEeccCCCc----EEEEEECCCC--CEEEEEeCCCcEEEEEcCCC---eeeEEeeeccccee--
Q 020021 13 SLELSEEIL-QSMEVGMSFRDYNGR----ISSMDFHKSS--SYLVTASDDESIRLYDVTAA---TCLKTINSKKYGVD-- 80 (332)
Q Consensus 13 ~~~~~~~~~-~~~~~~~~l~~h~~~----I~~i~~s~dg--~~l~tgs~D~tv~iwd~~~~---~~~~~~~~~~~~v~-- 80 (332)
.++.++-+- ..+.++-.|+...+. +.++-|-..| ...+......+|++|++.++ ++++++.+|..+|.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~ 92 (356)
T 2w18_A 13 ELPASDSINPGNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQI 92 (356)
T ss_dssp -----------CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEE
T ss_pred cCccccCcCcceeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEE
Confidence 355555554 557788888877655 4456564433 23334444568999999998 88898888876543
Q ss_pred -----------------------EEEEccC----CCEEEEec-----------------CCCCCceeEEEEc-cCCceEE
Q 020021 81 -----------------------LVCFTSH----PTTVIYSS-----------------KNGWDESLRLLSL-HDNKYLR 115 (332)
Q Consensus 81 -----------------------~~~~~~~----~~~~~~~s-----------------~~g~d~~v~v~d~-~~~~~~~ 115 (332)
.++++|+ +..++.++ ..|+|+.|++|++ .+++.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~ 172 (356)
T 2w18_A 93 VPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKE 172 (356)
T ss_dssp CCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEE
T ss_pred EEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceee
Confidence 4555666 44444432 2456888999998 4577788
Q ss_pred EeecccccEEEEEecC---CCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccC
Q 020021 116 YFKGHHDRVVSLSLCS---SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKY 192 (332)
Q Consensus 116 ~~~~h~~~V~~v~~~~---~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~ 192 (332)
.+.+|...++.++|++ ++..|+|+|.|++||+||+++++++.++..+..
T Consensus 173 s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~---------------------------- 224 (356)
T 2w18_A 173 NQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS---------------------------- 224 (356)
T ss_dssp EEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-----------------------------
T ss_pred eeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc----------------------------
Confidence 8888888888888888 678999999999999999999887766642110
Q ss_pred CCCCeeEEEecCCCCCceeEEEcCCCCEE------------EEEcCCCeEEEEEccCCeEeEEeeec--CCCCCcceEEE
Q 020021 193 EKGPFDIFSVGGDISDANVVKFSNDGRLM------------LLTTMEGHIHVLDSFRGTLLSTYNVK--PVSRNSTLEAS 258 (332)
Q Consensus 193 ~~~~~~~~~~~~~~~~v~~v~~s~dg~~l------------~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~~~~v~ 258 (332)
+...+..++|||||.++ ++++.|++|++||..+++.+..+... ..|.......
T Consensus 225 ------------~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg- 291 (356)
T 2w18_A 225 ------------YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEG- 291 (356)
T ss_dssp --------------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEE-
T ss_pred ------------ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcc-
Confidence 01234556777777765 66888999999999999887655321 2333333333
Q ss_pred ECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCc-eEEeCCCeeEEEeccce--EEEecc
Q 020021 259 FSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPP-VIKWTPGSLMFVTGSSE--LSFWIP 320 (332)
Q Consensus 259 ~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~-~l~~sp~~~~l~t~~~d--~~~w~~ 320 (332)
+.++.++|+|+.|++|+|||+.+++++.++.+|...+. .++|||||++|++|+.| +++|+.
T Consensus 292 -~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 292 -DVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -EEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred -ccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 33488999999999999999999999999998877655 58999999999999998 777764
No 109
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.1e-32 Score=240.11 Aligned_cols=222 Identities=14% Similarity=0.177 Sum_probs=172.7
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECC--CCCEEEEEeCCCcEEEEEcCCCe--eeEEeeecccceeEEEEccC--
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHK--SSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSH-- 87 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~--dg~~l~tgs~D~tv~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~-- 87 (332)
+++|+---.......+|++|.++|.+++|+| ++++|+||+.|++|+|||+.+++ ++..+.+|...|..++|+|+
T Consensus 37 v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 116 (316)
T 3bg1_A 37 VKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDY 116 (316)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTT
T ss_pred EEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCC
Confidence 4555432222345678999999999999986 48999999999999999998874 56677889889999999998
Q ss_pred CCEEEEecCCCCCceeEEEEccCCce---EEEeecccccEEEEEecCC-----------------CCeEEEeeCCCcEEE
Q 020021 88 PTTVIYSSKNGWDESLRLLSLHDNKY---LRYFKGHHDRVVSLSLCSS-----------------KDCFISGSLDRTVLL 147 (332)
Q Consensus 88 ~~~~~~~s~~g~d~~v~v~d~~~~~~---~~~~~~h~~~V~~v~~~~~-----------------~~~l~s~s~Dg~i~i 147 (332)
+..+++++. |++|++||+..+.. ...+.+|...|.+++|+|+ +++|++|+.|++|++
T Consensus 117 g~~lasgs~---D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~l 193 (316)
T 3bg1_A 117 GLILACGSS---DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKL 193 (316)
T ss_dssp CSCEEEECS---SSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCE
T ss_pred CcEEEEEcC---CCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEE
Confidence 567777654 88999999987632 3456789999999999997 468899999999999
Q ss_pred EeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCC----CEEEE
Q 020021 148 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG----RLMLL 223 (332)
Q Consensus 148 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg----~~l~~ 223 (332)
||++.+..... ...+.+|...|.+++|+|++ .++++
T Consensus 194 Wd~~~~~~~~~----------------------------------------~~~l~~h~~~V~~v~~sp~~~~~~~~las 233 (316)
T 3bg1_A 194 WKEEEDGQWKE----------------------------------------EQKLEAHSDWVRDVAWAPSIGLPTSTIAS 233 (316)
T ss_dssp EEECTTSCEEE----------------------------------------EECCBCCSSCEEEEECCCCSSCSCCEEEE
T ss_pred EEeCCCCccce----------------------------------------eeecccCCCceEEEEecCCCCCCCceEEE
Confidence 98754311000 01123455678999999987 88999
Q ss_pred EcCCCeEEEEEccCC---e-EeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECC
Q 020021 224 TTMEGHIHVLDSFRG---T-LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 281 (332)
Q Consensus 224 ~~~dg~i~i~d~~~~---~-~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~ 281 (332)
++.|++|++||+... . ....+. .+...+.+++|+|++++||+|+.||+|++|+..
T Consensus 234 ~s~D~~v~iw~~~~~~~~~~~~~~~~---~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 234 CSQDGRVFIWTCDDASSNTWSPKLLH---KFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EETTCEEEEEECSSTTCCCCBCCEEE---ECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EcCCCeEEEEEccCccccchhhhhhh---cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999999998762 1 111122 245788999999999999999999999999975
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.7e-31 Score=242.11 Aligned_cols=243 Identities=14% Similarity=0.230 Sum_probs=195.2
Q ss_pred cEEEEEECCCCCE-EEEEeCCCcEEEEEcCCCe----eeEEeeecccceeEEEEcc-CCCEEEEecCCCCCceeEEEEcc
Q 020021 36 RISSMDFHKSSSY-LVTASDDESIRLYDVTAAT----CLKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLSLH 109 (332)
Q Consensus 36 ~I~~i~~s~dg~~-l~tgs~D~tv~iwd~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~~~~~s~~g~d~~v~v~d~~ 109 (332)
....++++|+... +++++.|+.|+|||+.... .+..+.+|...|..++|+| ++..+++++. |++|++||+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---dg~v~vw~~~ 112 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE---DCTVMVWEIP 112 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET---TSEEEEEECC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC---CCeEEEEEcc
Confidence 3445788887754 4568999999999996542 3445778889999999999 7888888764 8899999998
Q ss_pred CC-------ceEEEeecccccEEEEEecCCC-CeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeC
Q 020021 110 DN-------KYLRYFKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFG 181 (332)
Q Consensus 110 ~~-------~~~~~~~~h~~~V~~v~~~~~~-~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (332)
++ +.+..+.+|...|.+++|+|++ +.|++++.|++|++||++++++...+.
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------- 171 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG--------------------- 171 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC---------------------
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe---------------------
Confidence 87 6688899999999999999998 699999999999999998876543321
Q ss_pred CEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCC-cceEEEEC
Q 020021 182 GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN-STLEASFS 260 (332)
Q Consensus 182 ~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~~~v~~s 260 (332)
..++...+.+++|+|+|+++++++.||.|++||+.+++.+..+.. .+.. .+..++|+
T Consensus 172 --------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~ 229 (402)
T 2aq5_A 172 --------------------PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDR--PHEGTRPVHAVFV 229 (402)
T ss_dssp --------------------TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC--SSCSSSCCEEEEC
T ss_pred --------------------cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeecc--CCCCCcceEEEEc
Confidence 012345678899999999999999999999999999998877621 2333 47789999
Q ss_pred CCCCEEEEE---cCCCcEEEEECCCCce-EEEe-cCCCCCCceEEeCCCeeEEE-eccce--EEEecccccc
Q 020021 261 PEGMFVISG---SGDGSVYAWSVRSGKE-VASW-MSFDTEPPVIKWTPGSLMFV-TGSSE--LSFWIPDLSK 324 (332)
Q Consensus 261 pdg~~l~sg---s~Dg~i~vWd~~~~~~-~~~~-~~~~~~v~~l~~sp~~~~l~-t~~~d--~~~w~~~~~~ 324 (332)
|++++|++| +.|+.|++||+.+++. +... ..|...+.+++|+|++++|+ +++.| +++|+....+
T Consensus 230 ~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 230 SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 999999999 8999999999988664 2222 35677899999999998875 55445 9999886554
No 111
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.6e-30 Score=238.51 Aligned_cols=248 Identities=12% Similarity=0.232 Sum_probs=191.4
Q ss_pred ccceeEeccCC------------CcEEEEEECCCC--CEEEEEeCCCcEEEEEcCCCeee--------------------
Q 020021 24 MEVGMSFRDYN------------GRISSMDFHKSS--SYLVTASDDESIRLYDVTAATCL-------------------- 69 (332)
Q Consensus 24 ~~~~~~l~~h~------------~~I~~i~~s~dg--~~l~tgs~D~tv~iwd~~~~~~~-------------------- 69 (332)
.++...|.+|. +.|.+++|+|++ .+|++++.|++|++||+.++...
T Consensus 71 ~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 150 (447)
T 3dw8_B 71 YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVT 150 (447)
T ss_dssp EEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCC
T ss_pred eeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCccccc
Confidence 34677899998 889999999998 79999999999999999764432
Q ss_pred -------------------EE-eeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC-CceEE-------Eeeccc
Q 020021 70 -------------------KT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLR-------YFKGHH 121 (332)
Q Consensus 70 -------------------~~-~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~-~~~~~-------~~~~h~ 121 (332)
.. ...|...|..++|++++..++++ . |+.|++||+.. ++.+. .+.+|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 226 (447)
T 3dw8_B 151 TLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-D---DLRINLWHLEITDRSFNIVDIKPANMEELT 226 (447)
T ss_dssp SCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-C---SSEEEEEETTEEEEEEEEEECCCSSGGGCC
T ss_pred ceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-C---CCeEEEEECCCCCceeeeeecccccccccC
Confidence 12 24678889999999999988876 3 88999999984 44444 356899
Q ss_pred ccEEEEEecCCC-CeEEEeeCCCcEEEEeCCCceE----EEEEEec--------------CceeEEEcCCCeEEEEEeCC
Q 020021 122 DRVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKC----QGLLRVQ--------------GRPAAAYDDQGLVFAVAFGG 182 (332)
Q Consensus 122 ~~V~~v~~~~~~-~~l~s~s~Dg~i~iWd~~~~~~----~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~ 182 (332)
..|++++|+|++ ++|++++.||+|++||+++++. ...+..+ ......+++++.+++++.++
T Consensus 227 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~ 306 (447)
T 3dw8_B 227 EVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYL 306 (447)
T ss_dssp CCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESS
T ss_pred cceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCC
Confidence 999999999998 9999999999999999988775 4444433 33456778888777777669
Q ss_pred EEEEEECccCCCCCeeEEEecCCCC---------------CceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeec
Q 020021 183 YIRMFDARKYEKGPFDIFSVGGDIS---------------DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247 (332)
Q Consensus 183 ~i~vwd~~~~~~~~~~~~~~~~~~~---------------~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 247 (332)
.|++||++.... ....+. ++.. .+..++|+|+|+++++++.||.|++||+.+++.+. +...
T Consensus 307 ~v~iwd~~~~~~-~~~~~~--~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~ 382 (447)
T 3dw8_B 307 SVKVWDLNMENR-PVETYQ--VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEAS 382 (447)
T ss_dssp EEEEEETTCCSS-CSCCEE--SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECC
T ss_pred eEEEEeCCCCcc-ccceee--ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeec
Confidence 999999986222 122222 2211 12348999999999999999999999999887653 1111
Q ss_pred ------------------------------CCCCCcceEEEECCCCCEEEEEcCCCcEEEEEC
Q 020021 248 ------------------------------PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSV 280 (332)
Q Consensus 248 ------------------------------~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~ 280 (332)
......+..++|+|++++||+++.++ +++|.-
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 383 RENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp STTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred ccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 01234567899999999999998776 888874
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=6.4e-30 Score=233.33 Aligned_cols=279 Identities=15% Similarity=0.218 Sum_probs=189.2
Q ss_pred ccCCCcEEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCC---EEEEecCCCCCceeEEE
Q 020021 31 RDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT---TVIYSSKNGWDESLRLL 106 (332)
Q Consensus 31 ~~h~~~I~~i~~s~-dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~s~~g~d~~v~v~ 106 (332)
.+|.+.|.+++|+| ++.+|++++.|++|++||+.+++++..+. +...+..+++.+.+. .+++++. |+.+++|
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~ 171 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTR---GPKVQLC 171 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEES---SSSEEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcC---CCeEEEE
Confidence 36999999999999 77899999999999999999999888776 455678888888554 6666654 7899999
Q ss_pred EccCCceEEEeecccccEEEEEecCCCC-eEEEeeCCCcEEEEeCCCce-EEEEEE---------------e--cCceeE
Q 020021 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEK-CQGLLR---------------V--QGRPAA 167 (332)
Q Consensus 107 d~~~~~~~~~~~~h~~~V~~v~~~~~~~-~l~s~s~Dg~i~iWd~~~~~-~~~~~~---------------~--~~~~~~ 167 (332)
|+.+++.+..+.+|...|.+++|+|+++ .|++++.||.|++||++.+. +...+. . ......
T Consensus 172 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 172 DLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp ESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred eCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 9999999999999999999999999998 59999999999999997654 222210 0 112345
Q ss_pred EEcCCCe-EEEEEeCCEEEEEECccCCCCCeeEEE-ecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEee
Q 020021 168 AYDDQGL-VFAVAFGGYIRMFDARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (332)
Q Consensus 168 ~~~~~~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~-~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (332)
.+++++. +++++.|+.|++||++..+........ ................+..+++++.++.|++||+.+++.+..+.
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 6777775 555556899999999865421110000 00111122223334445667777889999999999999888775
Q ss_pred ecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCC-eeEEEeccce--EEEec
Q 020021 246 VKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPG-SLMFVTGSSE--LSFWI 319 (332)
Q Consensus 246 ~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~-~~~l~t~~~d--~~~w~ 319 (332)
.|...+..++|+|++++|++|+.||.|++||+.+++.+.....+. ....+.|. ...+.+.+.+ +++|.
T Consensus 332 ---~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 332 ---GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT---TKSQLNPAFEDAWSSSDEEGGTSAWS 402 (408)
T ss_dssp ---CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----------------------------------------
T ss_pred ---cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE---eccccccccceeecccCccCceeecC
Confidence 466789999999999999999999999999999988765543322 22334443 3344444444 77775
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=1.1e-28 Score=224.90 Aligned_cols=264 Identities=12% Similarity=0.114 Sum_probs=207.3
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEE-EEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYL-VTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI 92 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l-~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 92 (332)
+.+++- ...+..+.+.+|.. +.+++|+|++++| ++++.|++|++||+.+++++..+..+. .+..++|+|+++.++
T Consensus 14 v~v~d~--~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~ 89 (391)
T 1l0q_A 14 ISVIDV--TSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVY 89 (391)
T ss_dssp EEEEET--TTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEE
T ss_pred EEEEEC--CCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEE
Confidence 444442 34466677777765 8999999999976 778899999999999999998887665 789999999999887
Q ss_pred EecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeE-EEeeCCCcEEEEeCCCceEEEEEEecCc-eeEEEc
Q 020021 93 YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF-ISGSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYD 170 (332)
Q Consensus 93 ~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l-~s~s~Dg~i~iWd~~~~~~~~~~~~~~~-~~~~~~ 170 (332)
++.. .++.|++||+.+++.+..+..| ..+.+++|+|+++.+ ++++.|+.|++||++++++...+..... ....++
T Consensus 90 ~~~~--~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 166 (391)
T 1l0q_A 90 VTNM--ASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVT 166 (391)
T ss_dssp EEET--TTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEEC
T ss_pred EEEC--CCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEEC
Confidence 6643 3689999999999988887755 468999999999977 7889999999999999888777665433 345677
Q ss_pred CCCeEE-EEE-eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEc---CCCeEEEEEccCCeEeEEee
Q 020021 171 DQGLVF-AVA-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT---MEGHIHVLDSFRGTLLSTYN 245 (332)
Q Consensus 171 ~~~~~~-~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~---~dg~i~i~d~~~~~~~~~~~ 245 (332)
+++..+ .++ .++.|++||++.... ..... +...+..++|+|+|+++++++ .++.|++||+.+++.+..+.
T Consensus 167 ~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~ 241 (391)
T 1l0q_A 167 PDGTKVYVANFDSMSISVIDTVTNSV--IDTVK---VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP 241 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEE--EEEEE---CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeE--EEEEe---cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe
Confidence 777544 333 468999999975421 11222 234678899999999988887 68999999999998877765
Q ss_pred ecCCCCCcceEEEECCCCCEE-EEEcCCCcEEEEECCCCceEEEecCCC
Q 020021 246 VKPVSRNSTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWMSFD 293 (332)
Q Consensus 246 ~~~~~~~~~~~v~~spdg~~l-~sgs~Dg~i~vWd~~~~~~~~~~~~~~ 293 (332)
. + ..+..++|+|||++| ++++.|+.|++||+.+++.+..+..+.
T Consensus 242 ~---~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~ 286 (391)
T 1l0q_A 242 V---G-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGK 286 (391)
T ss_dssp C---C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred c---C-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCc
Confidence 3 2 245679999999988 677899999999999998887775554
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-30 Score=243.40 Aligned_cols=264 Identities=8% Similarity=0.021 Sum_probs=196.2
Q ss_pred cceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEee-ecccceeEEEEccCCCEEEEecCCCCCcee
Q 020021 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (332)
Q Consensus 25 ~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v 103 (332)
++.+++.+|.+.|++++|+|+| .|+++++|+.+ +...+. .+...|..++|+|++..+++++. |++|
T Consensus 43 ~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~---~~~~~~~~~~~~V~~vawSPdG~~LAs~s~---dg~V 109 (588)
T 2j04_A 43 KYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQ---QNGLLNSQPVCYPRVCKPSPIDDWMAVLSN---NGNV 109 (588)
T ss_dssp CCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCC---SSCSSTTSCSCCEEEEEECSSSSCEEEEET---TSCE
T ss_pred cccceecCCCccEEEEEECCCC-------CcceEEEEeCC---CceEeecCCCCcEEEEEECCCCCEEEEEeC---CCcE
Confidence 4445668999999999999999 56666666543 322232 33667999999999999998875 7899
Q ss_pred EEEEccCCceEEEeecccc-----cEEEEEecCCCCeEEEeeCCCcEEEEeCCCceE-------EEEEEec------Cce
Q 020021 104 RLLSLHDNKYLRYFKGHHD-----RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC-------QGLLRVQ------GRP 165 (332)
Q Consensus 104 ~v~d~~~~~~~~~~~~h~~-----~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~-------~~~~~~~------~~~ 165 (332)
++||.++ .+..+. |.. .|.+++|+|||++|++|+.||+|++||+++++. ...++.. ...
T Consensus 110 ~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~ 186 (588)
T 2j04_A 110 SVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVT 186 (588)
T ss_dssp EEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEE
T ss_pred EEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEE
Confidence 9999644 666677 765 499999999999999999999999999988752 3444321 234
Q ss_pred eEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEe-cCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEe
Q 020021 166 AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSV-GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~-~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~ 244 (332)
...++|++ +++++.|+.|++||+........ ...+ .++...|.+++|+ |+.+++++ +++|++||...++.....
T Consensus 187 sVawSPdg-Laass~D~tVrlWd~~~~~~~~~-~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~ 261 (588)
T 2j04_A 187 HIVWYEDV-LVAALSNNSVFSMTVSASSHQPV-SRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLK 261 (588)
T ss_dssp EEEEETTE-EEEEETTCCEEEECCCSSSSCCC-EEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEE
T ss_pred EEEEcCCc-EEEEeCCCeEEEEECCCCccccc-eeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEE
Confidence 56788888 88888899999999875432110 1112 2566789999999 68888887 699999999887763322
Q ss_pred eecCCCCCcceEEEE--CCCCCEEEEEcCCCcEEEEECCC------Cce-------EEEec---------CCCCCCceEE
Q 020021 245 NVKPVSRNSTLEASF--SPEGMFVISGSGDGSVYAWSVRS------GKE-------VASWM---------SFDTEPPVIK 300 (332)
Q Consensus 245 ~~~~~~~~~~~~v~~--spdg~~l~sgs~Dg~i~vWd~~~------~~~-------~~~~~---------~~~~~v~~l~ 300 (332)
. .|...+..++| +||+..|+++++||+ ++|.... +.. +..+. .++..|.+++
T Consensus 262 ~---gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va 337 (588)
T 2j04_A 262 T---GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGIS 337 (588)
T ss_dssp C---SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEE
T ss_pred c---CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEE
Confidence 1 46788899999 999999999999999 9998742 100 00000 1122367899
Q ss_pred eCCCeeEEEeccc
Q 020021 301 WTPGSLMFVTGSS 313 (332)
Q Consensus 301 ~sp~~~~l~t~~~ 313 (332)
|||||+.+|+++.
T Consensus 338 ~SPdG~~lA~~~~ 350 (588)
T 2j04_A 338 LSPDGYSIAIVYD 350 (588)
T ss_dssp ECTTSSEEEEEEE
T ss_pred ECCCCCEEEEEEe
Confidence 9999999999875
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.3e-28 Score=222.75 Aligned_cols=262 Identities=13% Similarity=0.114 Sum_probs=207.3
Q ss_pred CEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEE
Q 020021 47 SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS 126 (332)
Q Consensus 47 ~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~ 126 (332)
.++++++.|++|++||+.+++++..+..+. .+..++|++++..++++. +.|+.|++||+.+++.+..+..|. .+.+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~--~~d~~i~v~d~~~~~~~~~~~~~~-~v~~ 78 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVAN--AHSNDVSIIDTATNNVIATVPAGS-SPQG 78 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEE--GGGTEEEEEETTTTEEEEEEECSS-SEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEEC--CCCCeEEEEECCCCeEEEEEECCC-Cccc
Confidence 468899999999999999999999888765 478999999999875543 237899999999999888887665 8999
Q ss_pred EEecCCCCeEE-EeeCCCcEEEEeCCCceEEEEEEecCc-eeEEEcCCCeEE-EEE-eCCEEEEEECccCCCCCeeEEEe
Q 020021 127 LSLCSSKDCFI-SGSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGLVF-AVA-FGGYIRMFDARKYEKGPFDIFSV 202 (332)
Q Consensus 127 v~~~~~~~~l~-s~s~Dg~i~iWd~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~~~i~vwd~~~~~~~~~~~~~~ 202 (332)
++|+|++++|+ +++.|++|++||+++++....+..... ....+++++..+ .++ .++.|++||++..+ ....+.
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--~~~~~~- 155 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA--VINTVS- 155 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEE-
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc--EEEEEe-
Confidence 99999999774 556789999999999988776665433 355677777544 333 47999999987532 112222
Q ss_pred cCCCCCceeEEEcCCCCEE-EEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEc---CCCcEEEE
Q 020021 203 GGDISDANVVKFSNDGRLM-LLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS---GDGSVYAW 278 (332)
Q Consensus 203 ~~~~~~v~~v~~s~dg~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs---~Dg~i~vW 278 (332)
.+ ..+..++|+|+|+.+ ++++.++.|++||+.+++.+..+. +...+..++|+|+|++|++++ .|+.|++|
T Consensus 156 -~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 156 -VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK----VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp -CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE----CSSEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred -cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe----cCCCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 22 346889999999877 677889999999999998876664 234667899999999999998 68999999
Q ss_pred ECCCCceEEEecCCCCCCceEEeCCCeeEE-Eeccce--EEEecccc
Q 020021 279 SVRSGKEVASWMSFDTEPPVIKWTPGSLMF-VTGSSE--LSFWIPDL 322 (332)
Q Consensus 279 d~~~~~~~~~~~~~~~~v~~l~~sp~~~~l-~t~~~d--~~~w~~~~ 322 (332)
|+.+++.+..+..+. .+.+++|+|+++.+ ++++.| +++|+...
T Consensus 230 d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 230 DTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp ETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 999998888777665 47889999999766 665554 88888754
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.9e-29 Score=223.29 Aligned_cols=255 Identities=19% Similarity=0.256 Sum_probs=169.8
Q ss_pred cceeEeccCCCcEEEEEECC--CCCEEEEEeCCCcEEEEEcCCC---------eeeEEeeecccceeEEEEccC--CCEE
Q 020021 25 EVGMSFRDYNGRISSMDFHK--SSSYLVTASDDESIRLYDVTAA---------TCLKTINSKKYGVDLVCFTSH--PTTV 91 (332)
Q Consensus 25 ~~~~~l~~h~~~I~~i~~s~--dg~~l~tgs~D~tv~iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~~ 91 (332)
+....+.+|.++|.+++|+| ++++|++|+.|++|++||+.++ +++..+..|...+..++|+++ +..+
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 56778899999999999999 6999999999999999999887 567788888899999999999 8888
Q ss_pred EEecCCCCCceeEEEEccCCceEEEee-------------cccccEEEEEecCC---CCeEEEeeCCCcEEEEeCCCceE
Q 020021 92 IYSSKNGWDESLRLLSLHDNKYLRYFK-------------GHHDRVVSLSLCSS---KDCFISGSLDRTVLLWDQRAEKC 155 (332)
Q Consensus 92 ~~~s~~g~d~~v~v~d~~~~~~~~~~~-------------~h~~~V~~v~~~~~---~~~l~s~s~Dg~i~iWd~~~~~~ 155 (332)
++++. |+.|++||+.+++.+..+. +|...+.+++|+|+ ++.+++++.|+.+.+|+...++.
T Consensus 128 ~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 204 (351)
T 3f3f_A 128 ACLGN---DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL 204 (351)
T ss_dssp EEEET---TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE
T ss_pred EEecC---CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce
Confidence 88764 8899999998877544332 68889999999997 89999999999998888777654
Q ss_pred EEEEEec----CceeEEEcCCC-----eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEc-
Q 020021 156 QGLLRVQ----GRPAAAYDDQG-----LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT- 225 (332)
Q Consensus 156 ~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~- 225 (332)
....... ......+++++ .+++++.|+.|++||++... .................+++......+.
T Consensus 205 ~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (351)
T 3f3f_A 205 HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL----SPLASEESLTNSNMFDNSADVDMDAQGRS 280 (351)
T ss_dssp EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------
T ss_pred eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc----CccccCCcccceeccCCCccccccccccc
Confidence 3222221 12234555553 34444456667777665321 1111111111222222333333322222
Q ss_pred ---CCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe
Q 020021 226 ---MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW 289 (332)
Q Consensus 226 ---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~ 289 (332)
....+.+|+....+.+..+. .|...+.+++|+|++++|++|+.||.|++||+.+++.+..+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 281 DSNTEEKAELQSNLQVELLSEHD---DHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ----------CCSEEEEEEEEEC---TTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ccccceeeeecccccccEEEEEe---cccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 22233444433334444443 56778999999999999999999999999999987665544
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.5e-28 Score=222.25 Aligned_cols=244 Identities=15% Similarity=0.159 Sum_probs=173.3
Q ss_pred EEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeE-EE
Q 020021 60 LYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF-IS 138 (332)
Q Consensus 60 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l-~s 138 (332)
||+..+.+.+.++..|...|.+++|++++..+++++ +..+++||++.++.+.... ...+..+++.++++.+ ++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~----~~~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILST----LKSFEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEEC----SSEEEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEc----CCEEEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEE
Confidence 566777777778888999999999999999888775 3458999998876554433 2357778888888776 67
Q ss_pred eeCCCcEEEEeCCCceEEEEEEecCce-eEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCC
Q 020021 139 GSLDRTVLLWDQRAEKCQGLLRVQGRP-AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND 217 (332)
Q Consensus 139 ~s~Dg~i~iWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 217 (332)
++.|++|++||.+++++...+..+... ...++++ .+.++.++.|++||+..... .+..+.. ....+++++
T Consensus 77 ~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~~~i~i~d~~~~~~-~~~~~~~-----~~~~~~~s~- 147 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSRE--FIVVSYGDVISVFKFGNPWK-RITDDIR-----FGGVCEFSN- 147 (355)
T ss_dssp CSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSS--EEEEEETTEEEEEESSTTCC-BSSCCEE-----EEEEEEEET-
T ss_pred ECCccEEEEEECCCCcEEEEEECCCceEEEEEcCC--EEEEEEcCEEEEEECCCCce-eeEEecc-----CCceEEEEc-
Confidence 888999999999999888777654422 2333333 34456799999999986511 1111110 234567777
Q ss_pred CCEEEE--EcCCCeEEEEEccCCeE----------------eEEeeecCCCCCcceEEEECCCCCEEEEEcCCCc-EEEE
Q 020021 218 GRLMLL--TTMEGHIHVLDSFRGTL----------------LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS-VYAW 278 (332)
Q Consensus 218 g~~l~~--~~~dg~i~i~d~~~~~~----------------~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~-i~vW 278 (332)
.+++. ++.+|.|++||+.++.. +..+. .|...+.+++|+|||++||+|+.||+ |+||
T Consensus 148 -~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~---~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 148 -GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK---AHTNPIKMVRLNRKSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp -TEEEEEESSCTTCEEEEECCC------------------CCEEEC---CCSSCEEEEEECTTSSEEEEEETTCSEEEEE
T ss_pred -cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE---ccCCceEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 55655 58899999999987651 33333 57788999999999999999999999 9999
Q ss_pred ECCCCceEEEec-C-CCCCCceEEeCCCeeEEEeccce--EEEecccc
Q 020021 279 SVRSGKEVASWM-S-FDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDL 322 (332)
Q Consensus 279 d~~~~~~~~~~~-~-~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~ 322 (332)
|+.+++.+..+. + |...|.+++|+|++++|++++.| +++|+...
T Consensus 224 d~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 224 KTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp ETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred ECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 999999999987 4 99999999999999999999887 88887654
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=3.9e-29 Score=220.50 Aligned_cols=199 Identities=10% Similarity=0.123 Sum_probs=145.8
Q ss_pred cEEEEEECCC----CCEEEEEeC--------------------CCcEEEEEc-CCCeeeEEeeecccceeEEEEcc---C
Q 020021 36 RISSMDFHKS----SSYLVTASD--------------------DESIRLYDV-TAATCLKTINSKKYGVDLVCFTS---H 87 (332)
Q Consensus 36 ~I~~i~~s~d----g~~l~tgs~--------------------D~tv~iwd~-~~~~~~~~~~~~~~~v~~~~~~~---~ 87 (332)
.|.+|+|+|| +.++++++. |++|++|++ .+++.+..+..|...+..++|++ +
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~ 192 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM 192 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETS
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCC
Confidence 5667777778 777877663 999999999 45888888888888899999998 6
Q ss_pred CCEEEEecCCCCCceeEEEEccCCceEEEeecccc---cEEEEEecCCCCeE------------EEeeCCCcEEEEeCCC
Q 020021 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHD---RVVSLSLCSSKDCF------------ISGSLDRTVLLWDQRA 152 (332)
Q Consensus 88 ~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~---~V~~v~~~~~~~~l------------~s~s~Dg~i~iWd~~~ 152 (332)
+..+++++. |++||+||++++++++++.+|.. .+.+++|+|+++++ +||+.|++|++||..+
T Consensus 193 ~~~LaSgS~---D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 193 QEALLGTTI---MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp TTEEEEEET---TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CceEEEecC---CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 677777754 99999999999999999987654 56777899999887 5566777777777776
Q ss_pred ceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEE
Q 020021 153 EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHV 232 (332)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i 232 (332)
+++...+.. .+ ..++... .+..+.++.++++++.|++|+|
T Consensus 270 gk~l~v~~~--------------------------~~------------p~Gh~~~--~lsg~~sg~~lASgS~DgTIkI 309 (356)
T 2w18_A 270 TLSVGVMLY--------------------------CL------------PPGQAGR--FLEGDVKDHCAAAILTSGTIAI 309 (356)
T ss_dssp TEEEEEEEE--------------------------CC------------CTTCCCC--EEEEEEETTEEEEEETTSCEEE
T ss_pred CEEEEEEEe--------------------------ec------------cCCCcce--eEccccCCCEEEEEcCCCcEEE
Confidence 665432210 00 0112111 2233444888999999999999
Q ss_pred EEccCCeEeEEeeecCCCCCcc-eEEEECCCCCEEEEEcCCCcEEEEEC
Q 020021 233 LDSFRGTLLSTYNVKPVSRNST-LEASFSPEGMFVISGSGDGSVYAWSV 280 (332)
Q Consensus 233 ~d~~~~~~~~~~~~~~~~~~~~-~~v~~spdg~~l~sgs~Dg~i~vWd~ 280 (332)
||+.+++.+.++. .|...+ ..++|||||++|+||+.|++|+|||+
T Consensus 310 WDl~tGk~l~tL~---gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 310 WDLLLGQCTALLP---PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EETTTCSEEEEEC---CC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EECCCCcEEEEec---CCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9999999998876 333433 35899999999999999999999996
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.1e-28 Score=221.76 Aligned_cols=257 Identities=12% Similarity=0.104 Sum_probs=193.8
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEE--ccCCCEE
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCF--TSHPTTV 91 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~ 91 (332)
+.+|+---........+.+|.+.|.+++|+|++++|++++.|++|++||+.+++++. +..|...|..++| ++++..+
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l 144 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCV 144 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEE
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEE
Confidence 444443222344457899999999999999999999999999999999999998776 5568888999999 7777778
Q ss_pred EEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe----cCceeE
Q 020021 92 IYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV----QGRPAA 167 (332)
Q Consensus 92 ~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~----~~~~~~ 167 (332)
++++. |+.|++||+.+++.+..+..|. .+.++.+.+ ..++.++.|+.+++||++.......... ......
T Consensus 145 ~~~~~---dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (368)
T 3mmy_A 145 MTGSW---DKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCV 218 (368)
T ss_dssp EEEET---TSEEEEECSSCSSCSEEEECSS-CEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEE
T ss_pred EEccC---CCcEEEEECCCCcEEEEEecCC-CceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceE
Confidence 77764 8899999999999888888775 566666654 5889999999999999977643322211 111122
Q ss_pred EEc-CCC----eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCC------------CceeEEEcCCCCEEEEEcCCCeE
Q 020021 168 AYD-DQG----LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS------------DANVVKFSNDGRLMLLTTMEGHI 230 (332)
Q Consensus 168 ~~~-~~~----~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~------------~v~~v~~s~dg~~l~~~~~dg~i 230 (332)
.+. ... .+++++.++.|++||++..... .......++.. .+.+++|+|+++++++++.||.|
T Consensus 219 ~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i 297 (368)
T 3mmy_A 219 AIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA-KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRF 297 (368)
T ss_dssp EEEECTTSCEEEEEEEETTSEEEEEESSCSCHH-HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCE
T ss_pred EEcccCCCCCCeEEEecCCCcEEEEecCCCCcc-ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeE
Confidence 221 111 2667777999999999764320 01111222222 58999999999999999999999
Q ss_pred EEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECC
Q 020021 231 HVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 281 (332)
Q Consensus 231 ~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~ 281 (332)
++||+.+++.+..+. .|...+..++|+|||++|++|+.|+..+.|++-
T Consensus 298 ~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 298 SFWDKDARTKLKTSE---QLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EEEETTTTEEEEECC---CCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred EEEECCCCcEEEEec---CCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 999999999887775 456789999999999999999999865555543
No 120
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=6.8e-29 Score=221.76 Aligned_cols=248 Identities=13% Similarity=0.102 Sum_probs=193.1
Q ss_pred eeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCc---eEEEeecccccEEEEEecCCCC-eEEEeeCCCcEEE
Q 020021 72 INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK---YLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLL 147 (332)
Q Consensus 72 ~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~---~~~~~~~h~~~V~~v~~~~~~~-~l~s~s~Dg~i~i 147 (332)
...|...|..++|+|++..+++++. |+.|++||+.+++ ....+.+|...|.+++|+|+++ +|++++.||.|++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSW---DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEET---TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcC---CCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 4568888999999999999888764 8899999998877 3556679999999999999999 9999999999999
Q ss_pred EeC-CCceEEEEEEe--c--CceeEEEcCCCeEEEEEeCCEEEEEECcc---------CCCCCeeEEEecCCCCCceeEE
Q 020021 148 WDQ-RAEKCQGLLRV--Q--GRPAAAYDDQGLVFAVAFGGYIRMFDARK---------YEKGPFDIFSVGGDISDANVVK 213 (332)
Q Consensus 148 Wd~-~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~i~vwd~~~---------~~~~~~~~~~~~~~~~~v~~v~ 213 (332)
||+ .+++.. .+.. + ......+.+...+++++.|+.|++||++. .+. .. .. .+...+.+++
T Consensus 84 wd~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~--~~-~~~~~v~~~~ 157 (342)
T 1yfq_A 84 VDLIGSPSFQ-ALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN--SN--NT-KVKNKIFTMD 157 (342)
T ss_dssp ECSSSSSSEE-ECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESC--SS--SS-SSCCCEEEEE
T ss_pred EEeccCCceE-eccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCe--ee--EE-eeCCceEEEE
Confidence 999 877653 2222 2 12345556655667777899999999875 221 11 11 1446789999
Q ss_pred EcCCCCEEEEEcCCCeEEEEEccC-CeEeEEeeecCCCCCcceEEEECC-CCCEEEEEcCCCcEEEEECCCC------ce
Q 020021 214 FSNDGRLMLLTTMEGHIHVLDSFR-GTLLSTYNVKPVSRNSTLEASFSP-EGMFVISGSGDGSVYAWSVRSG------KE 285 (332)
Q Consensus 214 ~s~dg~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~v~~sp-dg~~l~sgs~Dg~i~vWd~~~~------~~ 285 (332)
|+|++ +++++.++.|++||+.+ +........ ..+...+.+++|+| +++++++++.||.|++|++... +.
T Consensus 158 ~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~ 234 (342)
T 1yfq_A 158 TNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEE-SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSK 234 (342)
T ss_dssp ECSSE--EEEEESTTEEEEEESSCCTTCCCEEEE-CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTT
T ss_pred ecCCc--EEEEeCCCeEEEEECCccccccceeee-cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccc
Confidence 99988 89999999999999987 543211111 23456788999999 9999999999999999999876 66
Q ss_pred EEEecCCCC---------CCceEEeCCCeeEEEeccce--EEEeccc-cccccccccc
Q 020021 286 VASWMSFDT---------EPPVIKWTPGSLMFVTGSSE--LSFWIPD-LSKLGAYVGR 331 (332)
Q Consensus 286 ~~~~~~~~~---------~v~~l~~sp~~~~l~t~~~d--~~~w~~~-~~~~~~~~~~ 331 (332)
+..+..|.. .|.+++|+|++++|++++.| +++|+.. .+.+..+.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 292 (342)
T 1yfq_A 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF 292 (342)
T ss_dssp CEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred ceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcc
Confidence 777777755 89999999999999999877 8889875 3345555443
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8e-29 Score=245.19 Aligned_cols=227 Identities=15% Similarity=0.172 Sum_probs=183.6
Q ss_pred eEecHHHHhcccceeEeccCCCcEEEEEECCC--CCEEEEEeCCCcEEEEEcCCCe--eeEEeeecccceeEEEEccC--
Q 020021 14 LELSEEILQSMEVGMSFRDYNGRISSMDFHKS--SSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSH-- 87 (332)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~h~~~I~~i~~s~d--g~~l~tgs~D~tv~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~-- 87 (332)
+.+|+---...+....+.+|.++|.+++|+|+ +++|++|+.|++|++||+.+++ .+..+..|...|..++|+|+
T Consensus 33 I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~ 112 (753)
T 3jro_A 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY 112 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG
T ss_pred EEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCC
Confidence 45554322355677889999999999999988 9999999999999999999887 67778889899999999999
Q ss_pred CCEEEEecCCCCCceeEEEEccCCc--eEEEeecccccEEEEEecC-------------CCCeEEEeeCCCcEEEEeCCC
Q 020021 88 PTTVIYSSKNGWDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCS-------------SKDCFISGSLDRTVLLWDQRA 152 (332)
Q Consensus 88 ~~~~~~~s~~g~d~~v~v~d~~~~~--~~~~~~~h~~~V~~v~~~~-------------~~~~l~s~s~Dg~i~iWd~~~ 152 (332)
+..+++++. |+.|++||+.++. ....+.+|...|.+++|+| +++.|++|+.||+|++||+++
T Consensus 113 ~~~l~sgs~---dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~ 189 (753)
T 3jro_A 113 GPLLLVASS---DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (753)
T ss_dssp CSEEEEEET---TSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEET
T ss_pred CCEEEEEeC---CCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccC
Confidence 888888764 8899999998763 4566789999999999999 589999999999999999865
Q ss_pred ceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCC---CCEEEEEcCCCe
Q 020021 153 EKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND---GRLMLLTTMEGH 229 (332)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d---g~~l~~~~~dg~ 229 (332)
+...... .....+|...+.+++|+|+ ++++++++.||.
T Consensus 190 ~~~~~~~---------------------------------------~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 190 DAQTYVL---------------------------------------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp TTTEEEE---------------------------------------EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC
T ss_pred Cccccee---------------------------------------eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE
Confidence 4321100 0112245567899999999 999999999999
Q ss_pred EEEEEccCCeEeE--EeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 230 IHVLDSFRGTLLS--TYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 230 i~i~d~~~~~~~~--~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
|++||+.++.... .......+...+.+++|+|+|++|++|+.||.|++||+.+
T Consensus 231 I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 231 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 9999998764211 1111223567788999999999999999999999999974
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2e-27 Score=221.32 Aligned_cols=245 Identities=12% Similarity=0.062 Sum_probs=187.7
Q ss_pred EeccCCCcEEEEEECCCCCEE-EEEeCCCcEEEEEcC--CCeeeEEee--ecccceeEEEEccCCCEEEEecCCCCCcee
Q 020021 29 SFRDYNGRISSMDFHKSSSYL-VTASDDESIRLYDVT--AATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (332)
Q Consensus 29 ~l~~h~~~I~~i~~s~dg~~l-~tgs~D~tv~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v 103 (332)
.+.+|.+.|.+++|+|++++| ++|+.|++|+|||+. ++++++.+. .+...+..++|+|++..+++++. ++.+
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---~g~v 173 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK---FGDV 173 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEE
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC---CCcE
Confidence 456788899999999999996 999999999999999 888888887 44567899999999999988864 7889
Q ss_pred EEEEccCCceEE----EeecccccEEEEEecCC---CCeEEEeeCCCcEEEEeCCCceEEEEEE-ec--CceeEEEcCCC
Q 020021 104 RLLSLHDNKYLR----YFKGHHDRVVSLSLCSS---KDCFISGSLDRTVLLWDQRAEKCQGLLR-VQ--GRPAAAYDDQG 173 (332)
Q Consensus 104 ~v~d~~~~~~~~----~~~~h~~~V~~v~~~~~---~~~l~s~s~Dg~i~iWd~~~~~~~~~~~-~~--~~~~~~~~~~~ 173 (332)
++|++.+++... .+.+|...|++++|+|+ +++|++++.|++|++||++++++...+. .+ ......++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~ 253 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDY 253 (450)
T ss_dssp EEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTT
T ss_pred EEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCC
Confidence 999998876544 78899999999999999 9999999999999999999887665532 22 23455666333
Q ss_pred eEEEEEeCCEEEEEECccCCCCCeeEEEec-----------------------CCCCCceeEEEcCCCCEEEEEc-CCCe
Q 020021 174 LVFAVAFGGYIRMFDARKYEKGPFDIFSVG-----------------------GDISDANVVKFSNDGRLMLLTT-MEGH 229 (332)
Q Consensus 174 ~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~-----------------------~~~~~v~~v~~s~dg~~l~~~~-~dg~ 229 (332)
.+++++.|+.|++||++..+. ...+... .....+..++++|+++++++++ .++.
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~ 331 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKN--LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKC 331 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCE--EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSE
T ss_pred EEEEEeCCCeEEEEECCCCcE--eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCe
Confidence 555666789999999976431 2222211 1123578899999999999988 8999
Q ss_pred EEEEEc--cCC---eEeEEeeecCCCCCcceEEEECCCCCEEEEEcC------CCcEEEEECCC
Q 020021 230 IHVLDS--FRG---TLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG------DGSVYAWSVRS 282 (332)
Q Consensus 230 i~i~d~--~~~---~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~------Dg~i~vWd~~~ 282 (332)
|++||+ ..+ +.+..+. .+ ..+..++|+|++.+++.++. +..|++|.+..
T Consensus 332 i~iw~~~~~~~~~l~~~~~~~---~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 332 IIILEMSEKQKGDLALKQIIT---FP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EEEEEECSSSTTCEEEEEEEE---CS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred EEEEEeccCCCCceeeccEec---cC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 999999 555 4555444 23 67889999996555554453 45688887643
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=3.5e-28 Score=222.82 Aligned_cols=223 Identities=9% Similarity=0.029 Sum_probs=156.3
Q ss_pred ceeEeccCCCcEEEEEECC--------CCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCE-EEEecC
Q 020021 26 VGMSFRDYNGRISSMDFHK--------SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTT-VIYSSK 96 (332)
Q Consensus 26 ~~~~l~~h~~~I~~i~~s~--------dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~s~ 96 (332)
....|.||++.|++|+|+| |+++|||||.|++|||||+.++.++..+..|...+..++|+|++.. +++++
T Consensus 128 ~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~- 206 (393)
T 4gq1_A 128 VLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGE- 206 (393)
T ss_dssp EECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEE-
T ss_pred eecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecC-
Confidence 3455789999999999998 8899999999999999999998888888888889999999998864 55554
Q ss_pred CCCCceeEEEEccCCceEEE-------------------------eecccccEEEEEec-CCCCeEEEeeCCCcEEEEeC
Q 020021 97 NGWDESLRLLSLHDNKYLRY-------------------------FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQ 150 (332)
Q Consensus 97 ~g~d~~v~v~d~~~~~~~~~-------------------------~~~h~~~V~~v~~~-~~~~~l~s~s~Dg~i~iWd~ 150 (332)
.|++|++||+.+++.... ..+|...|.++.|+ ++++.+++++.|+++++||+
T Consensus 207 --~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~ 284 (393)
T 4gq1_A 207 --RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNL 284 (393)
T ss_dssp --TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC
T ss_pred --CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEEC
Confidence 389999999987754322 24688889999987 79999999999999999999
Q ss_pred CCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcC--CCCEEEEEcCCC
Q 020021 151 RAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN--DGRLMLLTTMEG 228 (332)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~--dg~~l~~~~~dg 228 (332)
..++....+.... ..++..... ... ....... ....+.++| ++.++++++.||
T Consensus 285 ~~~~~~~~l~~~~--------------------~~~~~~~~~--~~~--~~~~~~~-~~~~~~~~~~~~~~~~~sgs~Dg 339 (393)
T 4gq1_A 285 FANNDYNEISDST--------------------MKLGPKNLL--PNV--QGISLFP-SLLGACPHPRYMDYFATAHSQHG 339 (393)
T ss_dssp ---------------------------------------CCS--CSE--EEECSSC-CSSCCEECSSCTTEEEEEETTTT
T ss_pred ccCCCCceEeeec--------------------CccccEEEc--ccc--ccccccC-cceeEEEccCCCCEEEEEECCCC
Confidence 8765443332111 011111100 000 0111111 122334444 456777889999
Q ss_pred eEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEEC
Q 020021 229 HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSV 280 (332)
Q Consensus 229 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~ 280 (332)
.|++||..+++...... .+..+|.+++|||||++||+++.|| +.+|.+
T Consensus 340 ~V~lwd~~~~~~~~~~~---~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 340 LIQLINTYEKDSNSIPI---QLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EEEEEETTCTTCCEEEE---ECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEEEEECCCCcEEEEec---CCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 99999999988776554 3456899999999999999998777 556654
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2e-26 Score=212.70 Aligned_cols=242 Identities=11% Similarity=0.175 Sum_probs=195.8
Q ss_pred EeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEc
Q 020021 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (332)
Q Consensus 29 ~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~ 108 (332)
.+.+|.+.|.+++|+|++.++++++.|++|++||+.+++++..+..+...+..++|++++..++++.. .|+.|++||+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~i~~~d~ 241 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNW--ISEDISVIDR 241 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEET--TTTEEEEEET
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEec--CCCcEEEEEC
Confidence 45689999999999999999999999999999999999999999888888999999999998866542 3789999999
Q ss_pred cCCceEEEeecccccEEEEEecCCCCeEEEee--------CCCcEEEEeCCCceEEEEEEec-CceeEEEcCCCe-EEEE
Q 020021 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS--------LDRTVLLWDQRAEKCQGLLRVQ-GRPAAAYDDQGL-VFAV 178 (332)
Q Consensus 109 ~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s--------~Dg~i~iWd~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~ 178 (332)
.+++.+..+..+ ..+.+++|+|+++.+++++ .|+.|++||+++++....+... ......+++++. ++.+
T Consensus 242 ~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 242 KTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp TTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEE
T ss_pred CCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEE
Confidence 999888887765 4589999999999999988 4889999999988876655332 233456777764 4444
Q ss_pred -EeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcC---------------CCeEEEEEccCCeEeE
Q 020021 179 -AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM---------------EGHIHVLDSFRGTLLS 242 (332)
Q Consensus 179 -~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~---------------dg~i~i~d~~~~~~~~ 242 (332)
..++.|++||+...+ ....+. +...+..++|+|+|+++++++. ||.|++||..+++.+.
T Consensus 321 ~~~~~~v~v~d~~~~~--~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 321 DMCCSKIEVYDLKEKK--VQKSIP---VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp ETTTTEEEEEETTTTE--EEEEEE---CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred ecCCCEEEEEECCCCc--EEEEec---CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 457999999987532 111222 3356789999999998888766 5799999999999887
Q ss_pred EeeecCCCCCcceEEEECCCCCEEEEEcC-CCcEEEEECCC
Q 020021 243 TYNVKPVSRNSTLEASFSPEGMFVISGSG-DGSVYAWSVRS 282 (332)
Q Consensus 243 ~~~~~~~~~~~~~~v~~spdg~~l~sgs~-Dg~i~vWd~~~ 282 (332)
.+.. ...+..++|+|||++|++++. |++|++|++..
T Consensus 396 ~~~~----~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 396 FWEA----GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEC----SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EecC----CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 7653 345778999999999998865 99999999853
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=6.8e-27 Score=215.85 Aligned_cols=285 Identities=13% Similarity=0.111 Sum_probs=207.3
Q ss_pred CCcEEEEEECCCC-CEEEEEe----CCC----cEEEEEc--CCCeee--EEeeecccceeEEEEcc--------------
Q 020021 34 NGRISSMDFHKSS-SYLVTAS----DDE----SIRLYDV--TAATCL--KTINSKKYGVDLVCFTS-------------- 86 (332)
Q Consensus 34 ~~~I~~i~~s~dg-~~l~tgs----~D~----tv~iwd~--~~~~~~--~~~~~~~~~v~~~~~~~-------------- 86 (332)
...|....|.+.| .++++|+ .|| +++|||+ .+++++ ..+..|...+..+++.+
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 3467777888887 4666887 467 9999999 899887 45777776666555543
Q ss_pred CCCEEEEecCCCCC---ceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCC---cEEEEeCCCceEEEEEE
Q 020021 87 HPTTVIYSSKNGWD---ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR---TVLLWDQRAEKCQGLLR 160 (332)
Q Consensus 87 ~~~~~~~~s~~g~d---~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg---~i~iWd~~~~~~~~~~~ 160 (332)
.+..+++++..+.+ ++|++||+.. .....+.+|...|.+++|+|+|++|++++.|+ +|++||++++++.....
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~ 220 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS 220 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec
Confidence 25566666543223 7999999974 45678889999999999999999999999886 99999999887754332
Q ss_pred ecC-ceeEEEcCCCeEEE-EEe-C--CEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcC-CC--eEEE
Q 020021 161 VQG-RPAAAYDDQGLVFA-VAF-G--GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM-EG--HIHV 232 (332)
Q Consensus 161 ~~~-~~~~~~~~~~~~~~-~~~-~--~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~-dg--~i~i 232 (332)
... .....+++++..++ ++. + ..|.+||++..+ . ..+..+...+..++|||||+.+++++. ++ .|++
T Consensus 221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~---~--~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ---I--RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC---E--EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC---E--EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 222 34567888887555 333 3 469999987532 1 233445567889999999998888776 44 7888
Q ss_pred EEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCC---CcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEE
Q 020021 233 LDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD---GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFV 309 (332)
Q Consensus 233 ~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~D---g~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~ 309 (332)
||+.+++... +. .+...+..++|||||++|+.++.+ ..|++||+.+++. ..+..+. .+..++|+||+++|+
T Consensus 296 ~d~~~~~~~~-l~---~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 296 VNINGGAPQR-IT---WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVI 369 (415)
T ss_dssp EETTSSCCEE-CC---CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEE
T ss_pred EECCCCCEEE-Ee---cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEE
Confidence 8988776432 22 233566789999999999998765 5899999988775 4455554 789999999999888
Q ss_pred eccce-----EEEecccccccccccc
Q 020021 310 TGSSE-----LSFWIPDLSKLGAYVG 330 (332)
Q Consensus 310 t~~~d-----~~~w~~~~~~~~~~~~ 330 (332)
+++.+ +.+|+.+...+..+.+
T Consensus 370 ~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp EEEEETTEEEEEEEETTSCCEEECCC
T ss_pred EEEcCCCccEEEEEECCCCcEEEeeC
Confidence 87754 4555555555555544
No 126
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=3.9e-27 Score=218.30 Aligned_cols=211 Identities=21% Similarity=0.278 Sum_probs=172.5
Q ss_pred ccceeEeccCCCcEEEEEECCCCC-EEEEEeCCCcEEEEEcCCCee-------eEEeeecccceeEEEEccC-CCEEEEe
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATC-------LKTINSKKYGVDLVCFTSH-PTTVIYS 94 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~-~l~tgs~D~tv~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~~-~~~~~~~ 94 (332)
.+....+.+|.+.|.+++|+|++. +|++|+.|++|++||+.++.. ...+..|...|..++|+|. +..++++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE
Confidence 567788999999999999999998 999999999999999987432 3456678888999999994 5555555
Q ss_pred cCCCCCceeEEEEccCC---ceEEEeecccccEEEEEecCCCC-eEEEeeCCCcEEEEeCCCce-EEEEEEecCceeEEE
Q 020021 95 SKNGWDESLRLLSLHDN---KYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEK-CQGLLRVQGRPAAAY 169 (332)
Q Consensus 95 s~~g~d~~v~v~d~~~~---~~~~~~~~h~~~V~~v~~~~~~~-~l~s~s~Dg~i~iWd~~~~~-~~~~~~~~~~~~~~~ 169 (332)
+. |+.|++||+.++ +.+..+..|...|++++|+|++. .|++|+.||+|++||++... +...+
T Consensus 251 ~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~---------- 317 (430)
T 2xyi_A 251 AD---DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF---------- 317 (430)
T ss_dssp ET---TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE----------
T ss_pred eC---CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe----------
Confidence 43 889999999876 57778889999999999999887 68999999999999997632 11111
Q ss_pred cCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCC-EEEEEcCCCeEEEEEccC-----------
Q 020021 170 DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFR----------- 237 (332)
Q Consensus 170 ~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~~~~~dg~i~i~d~~~----------- 237 (332)
..+...+.+++|+|+++ ++++++.|+.|++||+..
T Consensus 318 ---------------------------------~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 364 (430)
T 2xyi_A 318 ---------------------------------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 364 (430)
T ss_dssp ---------------------------------ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHH
T ss_pred ---------------------------------ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccc
Confidence 12345688899999995 789999999999999976
Q ss_pred ---CeEeEEeeecCCCCCcceEEEECCCCC-EEEEEcCCCcEEEEECCCC
Q 020021 238 ---GTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGSGDGSVYAWSVRSG 283 (332)
Q Consensus 238 ---~~~~~~~~~~~~~~~~~~~v~~spdg~-~l~sgs~Dg~i~vWd~~~~ 283 (332)
.+++..+ ..|...+..++|+|+++ +|++++.||.|+||++.+.
T Consensus 365 ~~~~~~~~~~---~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 365 DGPPELLFIH---GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HCCTTEEEEC---CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCCcceEEEc---CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 2333333 35667899999999999 9999999999999999653
No 127
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.9e-27 Score=213.73 Aligned_cols=224 Identities=14% Similarity=0.115 Sum_probs=165.4
Q ss_pred ccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCC---------CceE
Q 020021 85 TSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR---------AEKC 155 (332)
Q Consensus 85 ~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~---------~~~~ 155 (332)
..++..+++++ .|++|++||+++++.+..+. ...|.++.++|+ ++|++.|++|++|+.. +++.
T Consensus 45 ~~d~~~l~sg~---~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 45 YYDKWVCMCRC---EDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SEEEEEEEEEE---ETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred cCCCCEEEEEC---CCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 34555666665 48999999999999888776 567888888887 9999999999999765 3333
Q ss_pred EEEEEec---CceeEEEcC--CCeEEE-EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCe
Q 020021 156 QGLLRVQ---GRPAAAYDD--QGLVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGH 229 (332)
Q Consensus 156 ~~~~~~~---~~~~~~~~~--~~~~~~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~ 229 (332)
...+... ......+++ ++.+++ ++.|+.|++||++..+. . ......+...+.+++|+|||.++++++.||.
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~--~-~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~ 193 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ--Y-IVHSAKSDVEYSSGVLHKDSLLLALYSPDGI 193 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE--E-EEECCCSSCCCCEEEECTTSCEEEEECTTSC
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE--E-EEEecCCCCceEEEEECCCCCEEEEEcCCCE
Confidence 3333221 133456666 665554 66789999999986432 1 1122234456899999999999999999999
Q ss_pred EEEEEccCCeEe-EEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecC---CCCCCc--eEEeCC
Q 020021 230 IHVLDSFRGTLL-STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMS---FDTEPP--VIKWTP 303 (332)
Q Consensus 230 i~i~d~~~~~~~-~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~---~~~~v~--~l~~sp 303 (332)
|++||+++++.+ ..+.. .|...+.+++|+|+|++|++++ |++|++||+.+++.+..+.. |...+. +++|+|
T Consensus 194 i~iwd~~~~~~~~~~~~~--~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPV--DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp EEEEESSCTTSCCEECCC--CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT
T ss_pred EEEEECCCCCCCccEEec--cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECC
Confidence 999999998876 55542 2678899999999999999999 55999999999877655543 333444 599999
Q ss_pred CeeEEEec---cceEEEecccc
Q 020021 304 GSLMFVTG---SSELSFWIPDL 322 (332)
Q Consensus 304 ~~~~l~t~---~~d~~~w~~~~ 322 (332)
++++|+++ +..+++|+++.
T Consensus 271 ~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 271 SGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECT
T ss_pred CCCEEEEecCCCCcEEEEEEcc
Confidence 99999994 44599997743
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=4e-25 Score=210.58 Aligned_cols=274 Identities=14% Similarity=0.145 Sum_probs=210.4
Q ss_pred ECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEc--cCCceEEEeec
Q 020021 42 FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL--HDNKYLRYFKG 119 (332)
Q Consensus 42 ~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~--~~~~~~~~~~~ 119 (332)
|+|++.++++++.|++|.+||..+++++.++..+.. +..++|+|+++.+++++. |++|++||+ .+++.+..+..
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~---d~~V~v~D~~~~t~~~~~~i~~ 220 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGR---DARIDMIDLWAKEPTKVAEIKI 220 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEET---TSEEEEEETTSSSCEEEEEEEC
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECC---CCeEEEEECcCCCCcEEEEEec
Confidence 789999999999999999999999999999984433 788999999999988864 689999999 88888888874
Q ss_pred ccccEEEEEecC----CCCeEEEee-CCCcEEEEeCCCceEEEEEEecC-------------ceeEEEcCCC-eEEE-EE
Q 020021 120 HHDRVVSLSLCS----SKDCFISGS-LDRTVLLWDQRAEKCQGLLRVQG-------------RPAAAYDDQG-LVFA-VA 179 (332)
Q Consensus 120 h~~~V~~v~~~~----~~~~l~s~s-~Dg~i~iWd~~~~~~~~~~~~~~-------------~~~~~~~~~~-~~~~-~~ 179 (332)
...+..++|+| +|+++++++ .|++|.+||..+.++...+.... .....+++++ .++. ..
T Consensus 221 -g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 221 -GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp -CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred -CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 45679999999 999999887 58999999999998887775421 1234555544 3333 33
Q ss_pred eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEE-EcCCCeEEEEEccCCeEeEEeeecCC-CCCcceEE
Q 020021 180 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLL-TTMEGHIHVLDSFRGTLLSTYNVKPV-SRNSTLEA 257 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~~v 257 (332)
.++.|.+||............. .......++|+|||+++++ +..+++|.+||..+++++..+..... |......+
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~---~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~ 376 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIG---AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF 376 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEE---CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE
T ss_pred CCCeEEEEEecCCCcceeEEec---cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc
Confidence 4689999998764322211222 1234677899999997655 55689999999999999887764211 22222222
Q ss_pred EECCC-CCEEEEEc-CCCcEEEEECCC-------CceEEEecCCCCCCceEEeCCCeeEEEecc---------ceEEEec
Q 020021 258 SFSPE-GMFVISGS-GDGSVYAWSVRS-------GKEVASWMSFDTEPPVIKWTPGSLMFVTGS---------SELSFWI 319 (332)
Q Consensus 258 ~~spd-g~~l~sgs-~Dg~i~vWd~~~-------~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~---------~d~~~w~ 319 (332)
++|+ ++.++|++ .|++|.+||+.+ .+.+.++..|...+..++|||++++|.+++ ..+.+|+
T Consensus 377 -~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d 455 (543)
T 1nir_A 377 -VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD 455 (543)
T ss_dssp -EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEE
T ss_pred -CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEE
Confidence 5787 67777775 689999999988 788999999988889999999999998875 2499998
Q ss_pred ccccc
Q 020021 320 PDLSK 324 (332)
Q Consensus 320 ~~~~~ 324 (332)
.+..+
T Consensus 456 ~~~~~ 460 (543)
T 1nir_A 456 LKNLD 460 (543)
T ss_dssp TTCTT
T ss_pred CCCCC
Confidence 86444
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=3.5e-26 Score=211.05 Aligned_cols=282 Identities=12% Similarity=0.121 Sum_probs=211.6
Q ss_pred cceeEecHH--HHhcccceeEeccCCCcEEEEEECC--------------CCCEEEEEeCC------CcEEEEEcCCCee
Q 020021 11 KVSLELSEE--ILQSMEVGMSFRDYNGRISSMDFHK--------------SSSYLVTASDD------ESIRLYDVTAATC 68 (332)
Q Consensus 11 ~~~~~~~~~--~~~~~~~~~~l~~h~~~I~~i~~s~--------------dg~~l~tgs~D------~tv~iwd~~~~~~ 68 (332)
.+.+.||+. .-+.....++|.+|...+..+++++ .+..++.++.+ ++|++||+. +..
T Consensus 92 ~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~ 170 (415)
T 2hqs_A 92 NVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYN 170 (415)
T ss_dssp EEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCS
T ss_pred EEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCC
Confidence 467888886 4444334477999999888887764 25677776665 799999997 455
Q ss_pred eEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEE-EeeCCCc--E
Q 020021 69 LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRT--V 145 (332)
Q Consensus 69 ~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~-s~s~Dg~--i 145 (332)
.+.+..|...+..++|+|+++.+++++..+-+..|++||+.+++.. .+.+|...+.+++|+|||+.|+ +++.|+. |
T Consensus 171 ~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i 249 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNL 249 (415)
T ss_dssp CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceE
Confidence 6778888888999999999999998875433469999999998765 5778889999999999999887 7777765 9
Q ss_pred EEEeCCCceEEEEEEec-CceeEEEcCCCeEEEEEe--CC--EEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCE
Q 020021 146 LLWDQRAEKCQGLLRVQ-GRPAAAYDDQGLVFAVAF--GG--YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRL 220 (332)
Q Consensus 146 ~iWd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~--~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 220 (332)
.+||++++++....... ......+++++..++.+. ++ .|.+||+...+. . .+..+...+..++|||||++
T Consensus 250 ~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~---~--~l~~~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 250 YVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP---Q--RITWEGSQNQDADVSSDGKF 324 (415)
T ss_dssp EEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC---E--ECCCSSSEEEEEEECTTSSE
T ss_pred EEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE---E--EEecCCCcccCeEECCCCCE
Confidence 99999887764322222 223567788887555443 34 677888765321 1 12223345678999999999
Q ss_pred EEEEcCC---CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCC---cEEEEECCCCceEEEecCCCC
Q 020021 221 MLLTTME---GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG---SVYAWSVRSGKEVASWMSFDT 294 (332)
Q Consensus 221 l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg---~i~vWd~~~~~~~~~~~~~~~ 294 (332)
+++++.+ ..|++||+.+++... +. .+ ..+..++|+|||++|++++.|+ .|++||+. ++....+..|++
T Consensus 325 l~~~~~~~g~~~i~~~d~~~~~~~~-l~---~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~ 398 (415)
T 2hqs_A 325 MVMVSSNGGQQHIAKQDLATGGVQV-LS---ST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDG 398 (415)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEE-CC---CS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSS
T ss_pred EEEEECcCCceEEEEEECCCCCEEE-ec---CC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCC
Confidence 9888764 589999999887642 22 12 2677899999999999998887 79999986 556778889999
Q ss_pred CCceEEeCCCe
Q 020021 295 EPPVIKWTPGS 305 (332)
Q Consensus 295 ~v~~l~~sp~~ 305 (332)
.|..++|+|-.
T Consensus 399 ~v~~~~~~~~~ 409 (415)
T 2hqs_A 399 QVKFPAWSPYL 409 (415)
T ss_dssp EEEEEEECCCC
T ss_pred CCcCCcccccc
Confidence 99999999964
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=4e-25 Score=210.62 Aligned_cols=293 Identities=12% Similarity=0.082 Sum_probs=215.9
Q ss_pred cccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEc--CCCeeeEEeeecccceeEEEEcc----CCCEEEEecC
Q 020021 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDV--TAATCLKTINSKKYGVDLVCFTS----HPTTVIYSSK 96 (332)
Q Consensus 23 ~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~s~ 96 (332)
..++..++..+.. +.++.|+|||++|++++.|++|++||+ .+++++.++..+ ..+..++|+| +++.+++++.
T Consensus 168 t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 168 SKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-IEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp TCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEE
T ss_pred CceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-CCcceEEeCCCcCCCCCEEEEEEc
Confidence 4566777773333 889999999999999999999999999 889998888754 3567899999 9998887752
Q ss_pred CCCCceeEEEEccCCceEEEeec----------ccc-cEEEEEecCCCC-eEEEeeCCCcEEEEeCCCceEEE--EEEec
Q 020021 97 NGWDESLRLLSLHDNKYLRYFKG----------HHD-RVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQG--LLRVQ 162 (332)
Q Consensus 97 ~g~d~~v~v~d~~~~~~~~~~~~----------h~~-~V~~v~~~~~~~-~l~s~s~Dg~i~iWd~~~~~~~~--~~~~~ 162 (332)
++++|.+||..++++++.+.. |.. .+.++.+++++. ++++...+++|.+||..+.+... .+...
T Consensus 246 --~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~ 323 (543)
T 1nir_A 246 --WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAA 323 (543)
T ss_dssp --ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECC
T ss_pred --cCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccC
Confidence 478999999999999888765 333 789999999765 56778889999999998765433 22211
Q ss_pred -CceeEEEcCCCeEEEEE--eCCEEEEEECccCCCCCeeEEEecC--CCCCceeEEEcCC-CCEEEEEc-CCCeEEEEEc
Q 020021 163 -GRPAAAYDDQGLVFAVA--FGGYIRMFDARKYEKGPFDIFSVGG--DISDANVVKFSND-GRLMLLTT-MEGHIHVLDS 235 (332)
Q Consensus 163 -~~~~~~~~~~~~~~~~~--~~~~i~vwd~~~~~~~~~~~~~~~~--~~~~v~~v~~s~d-g~~l~~~~-~dg~i~i~d~ 235 (332)
......+++++.++.++ .+++|++||..+.+. ...+.... |......+ ++|+ |.+++++. .|++|.+||.
T Consensus 324 ~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l--~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 324 PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL--SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGT 400 (543)
T ss_dssp SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEEC
T ss_pred cCccCceECCCCCEEEEEecCCCeEEEEECCCCeE--EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEe
Confidence 22346778888755444 368999999876431 12222211 22222222 4677 67777775 6899999999
Q ss_pred cC-------CeEeEEeeecCCCCCcceEEEECCCCCEEEEEc-------CCCcEEEEECCCCceE-EEe--------cCC
Q 020021 236 FR-------GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS-------GDGSVYAWSVRSGKEV-ASW--------MSF 292 (332)
Q Consensus 236 ~~-------~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs-------~Dg~i~vWd~~~~~~~-~~~--------~~~ 292 (332)
.+ +++++++.. +......++|+|||++|++++ .+++|.|||+.+++.+ ..+ ..+
T Consensus 401 ~~~~~~~~~~~~v~~l~~---~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~ 477 (543)
T 1nir_A 401 DPKNHPQYAWKKVAELQG---QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEG 477 (543)
T ss_dssp CTTTCTTTBTSEEEEEEC---SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSS
T ss_pred CCCCCchhcCeEEEEEEc---CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCC
Confidence 88 788888774 334556799999999999987 2779999999998876 443 345
Q ss_pred CCCCceEEeCCCeeEEEec-------cceEEEeccccccc
Q 020021 293 DTEPPVIKWTPGSLMFVTG-------SSELSFWIPDLSKL 325 (332)
Q Consensus 293 ~~~v~~l~~sp~~~~l~t~-------~~d~~~w~~~~~~~ 325 (332)
...+..+.|+|+|+.+..+ .+.+.+|+....++
T Consensus 478 ~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 478 AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKL 517 (543)
T ss_dssp CCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred CCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceE
Confidence 6778999999999877643 13488888765444
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=1.1e-24 Score=193.81 Aligned_cols=280 Identities=13% Similarity=0.107 Sum_probs=200.2
Q ss_pred EECCCCCE-EEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce-EEEee
Q 020021 41 DFHKSSSY-LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-LRYFK 118 (332)
Q Consensus 41 ~~s~dg~~-l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~-~~~~~ 118 (332)
.|++++++ +++.+.|++|++||+.+++.+..+..+...+ .++|+++++.+++++. .++.|.+||+++++. ...+.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSD--FCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEES--TTCEEEEEECSSSSCEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeC--CCCeEEEEECCCCceeEEecc
Confidence 46666555 7889999999999999999988877655556 8999999997777653 267999999999887 77777
Q ss_pred cccccEEEEEecCCCCeEEEeeCCC---cEEEEeCCCceEEEEEEecCc-eeEEEcCCCe-EEEEEe-CCE-EEEEECcc
Q 020021 119 GHHDRVVSLSLCSSKDCFISGSLDR---TVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGL-VFAVAF-GGY-IRMFDARK 191 (332)
Q Consensus 119 ~h~~~V~~v~~~~~~~~l~s~s~Dg---~i~iWd~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~-~~~-i~vwd~~~ 191 (332)
.+..+..+++|+|++++++++..++ .|.+||+.+++....+..... ....+++++. ++.+.. ++. |.+|++..
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 7777766699999999998665553 899999999888776655433 3567778775 554444 467 99999864
Q ss_pred CCCCCee-E-EEecCCCCCceeEEEcCCCCEE-EEEcCCCeEEEEEccCCeE---eEEeeecCCCCCcceEEEECCCCCE
Q 020021 192 YEKGPFD-I-FSVGGDISDANVVKFSNDGRLM-LLTTMEGHIHVLDSFRGTL---LSTYNVKPVSRNSTLEASFSPEGMF 265 (332)
Q Consensus 192 ~~~~~~~-~-~~~~~~~~~v~~v~~s~dg~~l-~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~~~v~~spdg~~ 265 (332)
.. ... . ............++|+|||+++ +++..++.|++||+.+++. +..+.. ...+..++|+|||++
T Consensus 161 ~g--~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~----~~~~~~~~~spdg~~ 234 (331)
T 3u4y_A 161 DG--VLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT----NNLPGTIVVSRDGST 234 (331)
T ss_dssp TC--CEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC----SSCCCCEEECTTSSE
T ss_pred CC--cEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC----CCCCceEEECCCCCE
Confidence 21 111 0 1111122346889999999855 5556789999999998887 555542 244567899999997
Q ss_pred EEEEc-CCCcEEEEECCCCce--EEEecCC----CCC---CceEEeCCCeeEEEeccc---eEEEeccccccccccc
Q 020021 266 VISGS-GDGSVYAWSVRSGKE--VASWMSF----DTE---PPVIKWTPGSLMFVTGSS---ELSFWIPDLSKLGAYV 329 (332)
Q Consensus 266 l~sgs-~Dg~i~vWd~~~~~~--~~~~~~~----~~~---v~~l~~sp~~~~l~t~~~---d~~~w~~~~~~~~~~~ 329 (332)
|+.++ .++.|.+||+.+++. +..+..+ ... ...++|+||+++|..++. .+.+|+.+...++.+.
T Consensus 235 l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~ 311 (331)
T 3u4y_A 235 VYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVA 311 (331)
T ss_dssp EEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECT
T ss_pred EEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccccee
Confidence 76654 578999999998876 3333222 222 245899999987654432 3899998876666543
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=8.9e-25 Score=215.43 Aligned_cols=279 Identities=10% Similarity=0.048 Sum_probs=206.2
Q ss_pred CCcEEEEEECCCCCEEEEEeC-CC-----cEEEEEcCCCeeeEEeeeccc------------------------ceeEEE
Q 020021 34 NGRISSMDFHKSSSYLVTASD-DE-----SIRLYDVTAATCLKTINSKKY------------------------GVDLVC 83 (332)
Q Consensus 34 ~~~I~~i~~s~dg~~l~tgs~-D~-----tv~iwd~~~~~~~~~~~~~~~------------------------~v~~~~ 83 (332)
...|.+++|||||++|++++. |+ +|++||+.+++....+..+.. .+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456999999999999999998 88 999999999988776655432 277899
Q ss_pred EccCCCEEEEecCCCCCceeEEEEccCCc--eEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe
Q 020021 84 FTSHPTTVIYSSKNGWDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV 161 (332)
Q Consensus 84 ~~~~~~~~~~~s~~g~d~~v~v~d~~~~~--~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~ 161 (332)
|+|+++.+++++. +.|.+||+.+++ ....+..|...+..++|+|||++|++++. +.|.+||+.+++.......
T Consensus 116 ~SpDg~~l~~~~~----~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 116 WSPDAQRLLFPLG----GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp ECTTSSEEEEEET----TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCC
T ss_pred ECCCCCEEEEEeC----CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccC
Confidence 9999999998863 789999998873 34567788889999999999999999874 6999999988776543322
Q ss_pred cC------------------ceeEEEcCCCeEE-EEEeCC---------------------------------EEEEEEC
Q 020021 162 QG------------------RPAAAYDDQGLVF-AVAFGG---------------------------------YIRMFDA 189 (332)
Q Consensus 162 ~~------------------~~~~~~~~~~~~~-~~~~~~---------------------------------~i~vwd~ 189 (332)
.. .....+++++..+ .+..++ .|.+||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 21 1346778877644 444443 7888887
Q ss_pred cc-CCCCCeeEEEec-CCCCCceeEEEcCCCCEEEEEcC-----CCeEEEEEccCCeEeEEeeecCC-CCCcceEEEECC
Q 020021 190 RK-YEKGPFDIFSVG-GDISDANVVKFSNDGRLMLLTTM-----EGHIHVLDSFRGTLLSTYNVKPV-SRNSTLEASFSP 261 (332)
Q Consensus 190 ~~-~~~~~~~~~~~~-~~~~~v~~v~~s~dg~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~~v~~sp 261 (332)
.. .+. ...... .+...+..++| |||+.+++... +..|++||+.+++....+..... ....+..++|+|
T Consensus 271 ~~~~~~---~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 271 AEQAQT---QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp STTCCC---EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred CCCCce---EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence 65 321 111111 23346788999 99999987654 56899999999887665543211 011334689999
Q ss_pred CCCEEEEEcCCCcEEEEECC-CCceEEEecCCCCCCceE-EeCCCeeEEE-eccc----eEEEecccc
Q 020021 262 EGMFVISGSGDGSVYAWSVR-SGKEVASWMSFDTEPPVI-KWTPGSLMFV-TGSS----ELSFWIPDL 322 (332)
Q Consensus 262 dg~~l~sgs~Dg~i~vWd~~-~~~~~~~~~~~~~~v~~l-~~sp~~~~l~-t~~~----d~~~w~~~~ 322 (332)
||+++++++.||.++||.+. +++ +..+..+...+..+ .|+||++.++ +++. .+++|..+.
T Consensus 347 dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 99999999999988888775 445 77777777777776 5999997664 4433 478998754
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=6.5e-23 Score=183.62 Aligned_cols=268 Identities=12% Similarity=0.121 Sum_probs=199.1
Q ss_pred CCCcEEEEEECCCCCEEEEEeC-------CCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEE
Q 020021 33 YNGRISSMDFHKSSSYLVTASD-------DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (332)
Q Consensus 33 h~~~I~~i~~s~dg~~l~tgs~-------D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v 105 (332)
....+..++|+|++++++.++. +++|.+||..+++.+..+.... .+..++++++++.++.+.. .++.|.+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~--~~~~v~~ 115 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNT--VNSAVTA 115 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEET--TTTEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEec--CCCEEEE
Confidence 3456789999999998887774 5689999999999888876543 3667899999997776653 3679999
Q ss_pred EEccCCceEEEeeccccc---------EEEEEecCCCCeEEEee--CCCcEEEEeCCCceEEEEEEecC--ceeEEEcCC
Q 020021 106 LSLHDNKYLRYFKGHHDR---------VVSLSLCSSKDCFISGS--LDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQ 172 (332)
Q Consensus 106 ~d~~~~~~~~~~~~h~~~---------V~~v~~~~~~~~l~s~s--~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~ 172 (332)
||.++++.+..+..+... +.++.|+|++++++.++ .++.|.+||.++++....+.... .....++++
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETT
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCC
Confidence 999999988877765432 78899999999777665 48899999999988877665222 234566776
Q ss_pred Ce-EEEEEeCCEEEEEECccCCCCCeeEEEec--CCCCCceeEEEcCCCCEEEEEc-CCCeEEEEEccCCeEeEEeeecC
Q 020021 173 GL-VFAVAFGGYIRMFDARKYEKGPFDIFSVG--GDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKP 248 (332)
Q Consensus 173 ~~-~~~~~~~~~i~vwd~~~~~~~~~~~~~~~--~~~~~v~~v~~s~dg~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~ 248 (332)
+. ++.+..++.|.+||....+. ....... ++...+..++|+|||+.+++++ .++.|.+||..+++.+..+....
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 273 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKI--LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE 273 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEE--EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred CCEEEEEcCCCeEEEEECCCCeE--EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 65 44444578999999875421 1222221 1233456799999999766554 55999999999998887766321
Q ss_pred CCCCcceEEEECCCCCEEEEE-cCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEec
Q 020021 249 VSRNSTLEASFSPEGMFVISG-SGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 311 (332)
Q Consensus 249 ~~~~~~~~v~~spdg~~l~sg-s~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~ 311 (332)
...++|+|||++++.+ ..++.|.+||+.+++.+..+... ..+..++|+||++++..+
T Consensus 274 -----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 274 -----SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVS 331 (353)
T ss_dssp -----CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEE
T ss_pred -----CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEE
Confidence 2468999999966555 47999999999999887776543 367899999999854443
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=1e-23 Score=183.26 Aligned_cols=254 Identities=11% Similarity=0.049 Sum_probs=184.2
Q ss_pred EEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC-CceEEEeeccc-ccEEEE
Q 020021 50 VTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLRYFKGHH-DRVVSL 127 (332)
Q Consensus 50 ~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~-~~~~~~~~~h~-~~V~~v 127 (332)
.+++.|++|++||+.+++... +..|...+..++|+|+++.+++++ ++.|.+||+.+ ++......+|. ..|.++
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS----EGLLYRLSLAGDPSPEKVDTGFATICNNDH 90 (297)
T ss_dssp --CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE----TTEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred CCCCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc----CCeEEEEeCCCCCCceEeccccccccccce
Confidence 356789999999999888764 455677899999999999988875 57899999999 88777776764 778999
Q ss_pred EecCCCCeEEEee--CCCcEEEEeC--CCceEEEEEEecCceeEEEcCCCeEE--EEEeCCEEEEEECccCCCCCeeEEE
Q 020021 128 SLCSSKDCFISGS--LDRTVLLWDQ--RAEKCQGLLRVQGRPAAAYDDQGLVF--AVAFGGYIRMFDARKYEKGPFDIFS 201 (332)
Q Consensus 128 ~~~~~~~~l~s~s--~Dg~i~iWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~vwd~~~~~~~~~~~~~ 201 (332)
+|+|++++|++++ .++..++|.+ .++...............+++++..+ +...++.+++|++..... . ...
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~-~--~~~ 167 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG-V--ETR 167 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC-C--EEE
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC-c--ceE
Confidence 9999999999998 4456666654 44432221111223345677777544 345689999998653221 1 123
Q ss_pred ecCCCCCceeEEEcCCCCEEEEEc-CCCeEEEEEcc-CCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCC-------
Q 020021 202 VGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD------- 272 (332)
Q Consensus 202 ~~~~~~~v~~v~~s~dg~~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~D------- 272 (332)
+..+...+..++|+|+|+.++.++ .++.+++|++. .+..+..+. .+...+..++|+|||++|+.++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT---DSAYGDWFPHPSPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC---CCSEEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe---cCCcccCCeEECCCCCEEEEEEcCCCCCccc
Confidence 334445678999999999887765 58899999875 344443333 233456778999999999999876
Q ss_pred ----CcEEEEECCCCce--EEEecCCCCCCceEEeCCCeeEEEeccce
Q 020021 273 ----GSVYAWSVRSGKE--VASWMSFDTEPPVIKWTPGSLMFVTGSSE 314 (332)
Q Consensus 273 ----g~i~vWd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~l~t~~~d 314 (332)
+.|++||+.+++. +..+..|...+..++|+|+++.|++++.+
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred ccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 5699999988765 34444778889999999999988887654
No 135
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=8.8e-23 Score=208.76 Aligned_cols=293 Identities=13% Similarity=0.133 Sum_probs=203.6
Q ss_pred eeEeccCCCcEEEEEECCCCCEEEEEeCC------CcEEEEEcCCCeeeEEeeecccce-------eEEEEccCCCEEEE
Q 020021 27 GMSFRDYNGRISSMDFHKSSSYLVTASDD------ESIRLYDVTAATCLKTINSKKYGV-------DLVCFTSHPTTVIY 93 (332)
Q Consensus 27 ~~~l~~h~~~I~~i~~s~dg~~l~tgs~D------~tv~iwd~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~~~~ 93 (332)
.+.|.+|.+.|.+++|||||++||.++.+ ..|.+||+.+++ ...+..|...+ ..++|+|+++ +++
T Consensus 45 ~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~ 122 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGN-LII 122 (1045)
T ss_dssp EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCC-EEE
T ss_pred EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCE-EEE
Confidence 46688999999999999999999988754 489999999887 46677777666 8899999998 444
Q ss_pred ecCCC----CCceeEEEEccCCceE-------------------------------------------------EEeecc
Q 020021 94 SSKNG----WDESLRLLSLHDNKYL-------------------------------------------------RYFKGH 120 (332)
Q Consensus 94 ~s~~g----~d~~v~v~d~~~~~~~-------------------------------------------------~~~~~h 120 (332)
.+... ....+.+||+.+++.. ..+.+|
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~ 202 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDM 202 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECC
T ss_pred EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCC
Confidence 43221 1235777777655422 223467
Q ss_pred cccEEEEEecCCCCeEEEeeCCCcEEEEeCCC-ceEEEEEE-ecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCee
Q 020021 121 HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLR-VQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFD 198 (332)
Q Consensus 121 ~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~ 198 (332)
...+.++.|+++ ..+++++.|+++++|++.. +.....+. ........+++++..++.+.++.|.+||+.. ..+.
T Consensus 203 ~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~---~~l~ 278 (1045)
T 1k32_A 203 STHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDT---EKIE 278 (1045)
T ss_dssp SSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTT---CCEE
T ss_pred CCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCc---eEee
Confidence 777888889887 6677888899999998643 21122221 1223345667777766666899999999832 1221
Q ss_pred EEEecC-----------CCCCceeEEEc-CCCCEEEEEcCCCeEEEEEccCCeEeE------------------------
Q 020021 199 IFSVGG-----------DISDANVVKFS-NDGRLMLLTTMEGHIHVLDSFRGTLLS------------------------ 242 (332)
Q Consensus 199 ~~~~~~-----------~~~~v~~v~~s-~dg~~l~~~~~dg~i~i~d~~~~~~~~------------------------ 242 (332)
.+.+ +...+..++|| |||+.+++++ ++.|++|+...++...
T Consensus 279 --~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~sdg~~l~~~s 355 (1045)
T 1k32_A 279 --KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGT 355 (1045)
T ss_dssp --ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEE
T ss_pred --eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEcCCCeEEEEE
Confidence 2222 11257889999 9998887776 6677777765443210
Q ss_pred -------Eeee-------cCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEE
Q 020021 243 -------TYNV-------KPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMF 308 (332)
Q Consensus 243 -------~~~~-------~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 308 (332)
.+.. ...+...+..++|||||++|++++.|+.|++||+.+++.......|...+..++|||||++|
T Consensus 356 ~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~l 435 (1045)
T 1k32_A 356 REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFI 435 (1045)
T ss_dssp TTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEE
T ss_pred CCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeE
Confidence 0000 00223456688999999999999999999999999988776666888889999999999988
Q ss_pred Eeccc------------eEEEecccccccccc
Q 020021 309 VTGSS------------ELSFWIPDLSKLGAY 328 (332)
Q Consensus 309 ~t~~~------------d~~~w~~~~~~~~~~ 328 (332)
++++. .+.+|+.+..++..+
T Consensus 436 a~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 436 AYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp EEEEEECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred EEEecCccccccCCCCCeEEEEECCCCcEEEe
Confidence 87654 477777665444443
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=3e-22 Score=178.25 Aligned_cols=269 Identities=9% Similarity=0.090 Sum_probs=176.9
Q ss_pred CEEEEEeCCCcEEEEEcC-CCe--eeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEcc--CCc--eEEEeec
Q 020021 47 SYLVTASDDESIRLYDVT-AAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DNK--YLRYFKG 119 (332)
Q Consensus 47 ~~l~tgs~D~tv~iwd~~-~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~--~~~--~~~~~~~ 119 (332)
.++++++.|++|++||+. +++ .+..+ .+...+..++|+|+++.+++++.. ++.+++|++. +++ .+..+..
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRP--EFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecC--CCeEEEEEecCCCCceeecccccc
Confidence 345555889999999995 342 23333 344567889999999988887642 3799999997 554 3344444
Q ss_pred ccccEEEEEecCCCCeEEEee-CCCcEEEEeCC---CceEEEEEEecC-ceeEEEcCCCe-EEEEE-eCCEEEEEECcc-
Q 020021 120 HHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQR---AEKCQGLLRVQG-RPAAAYDDQGL-VFAVA-FGGYIRMFDARK- 191 (332)
Q Consensus 120 h~~~V~~v~~~~~~~~l~s~s-~Dg~i~iWd~~---~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~-~~~~i~vwd~~~- 191 (332)
+. .+..++|+|++++|+.++ .++.|.+||+. .......+.... .....+++++. ++.+. .++.|++||+..
T Consensus 83 ~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 83 PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp SS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred CC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 44 788999999999776665 48899999984 333333332222 23456777775 44444 579999999875
Q ss_pred CCCCCee--EEEecCCCCCceeEEEcCCCCEEEE-EcCCCeEEEEEccC--CeE--eEEeeecCC---CCCcceEEEECC
Q 020021 192 YEKGPFD--IFSVGGDISDANVVKFSNDGRLMLL-TTMEGHIHVLDSFR--GTL--LSTYNVKPV---SRNSTLEASFSP 261 (332)
Q Consensus 192 ~~~~~~~--~~~~~~~~~~v~~v~~s~dg~~l~~-~~~dg~i~i~d~~~--~~~--~~~~~~~~~---~~~~~~~v~~sp 261 (332)
....... .... .....+..++|+|+|+++++ +..++.|++||+.. ++. .......+. ....+..++|+|
T Consensus 162 ~~~~~~~~~~~~~-~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 162 GHLVAQDPAEVTT-VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp SCEEEEEEEEEEC-STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred Cceeeeccccccc-CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC
Confidence 2111111 1111 11235678999999996654 55889999999843 433 222221111 123445789999
Q ss_pred CCCEEE-EEcCCCcEEEEECC--C--CceEEEecCCCCCCceEEeCCCeeEEEecc-c--eEEEeccc
Q 020021 262 EGMFVI-SGSGDGSVYAWSVR--S--GKEVASWMSFDTEPPVIKWTPGSLMFVTGS-S--ELSFWIPD 321 (332)
Q Consensus 262 dg~~l~-sgs~Dg~i~vWd~~--~--~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~-~--d~~~w~~~ 321 (332)
||++|+ ++..|+.|++||+. + .+.+..+..+.. +..++|+|++++|++++ . .+.+|..+
T Consensus 241 dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 241 DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 998887 55689999999997 2 234444544444 88999999998766655 2 38899655
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=2.4e-23 Score=205.16 Aligned_cols=274 Identities=9% Similarity=0.079 Sum_probs=191.7
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCe--eeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~ 113 (332)
.|.+++|||||++|++++. ++|++||+.++. ....+..+...+..++|+|+++.+++++ ++.|.+||+.+++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~----~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR----GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE----TTEEEEEETTTTEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe----CCcEEEEecCCCCE
Confidence 3889999999999999887 999999999883 4445666667788999999999998876 45899999999877
Q ss_pred EEEeeccccc----------------EEEEEecCCCCeEEEeeCCC---------------------------------c
Q 020021 114 LRYFKGHHDR----------------VVSLSLCSSKDCFISGSLDR---------------------------------T 144 (332)
Q Consensus 114 ~~~~~~h~~~----------------V~~v~~~~~~~~l~s~s~Dg---------------------------------~ 144 (332)
......+... +..+.|+|||++|++++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 6655555443 37799999999999998876 7
Q ss_pred EEEEeCCC-ceEEEEEEe--c--CceeEEEcCCCeEEEE-Ee-----CCEEEEEECccCCCCCeeEEEecCC--CCCcee
Q 020021 145 VLLWDQRA-EKCQGLLRV--Q--GRPAAAYDDQGLVFAV-AF-----GGYIRMFDARKYEKGPFDIFSVGGD--ISDANV 211 (332)
Q Consensus 145 i~iWd~~~-~~~~~~~~~--~--~~~~~~~~~~~~~~~~-~~-----~~~i~vwd~~~~~~~~~~~~~~~~~--~~~v~~ 211 (332)
|.+||+.+ ++....... . ......+ +++..++. .. +..|.+||+...+. ......... ...+..
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ--RVLAHETSPTWVPLHNS 341 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE--EEEEEEECSSCCCCCSC
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce--EEEEEcCCCCcCCcCCc
Confidence 89999988 765433211 1 1234566 76654443 32 35799999875432 112221110 013457
Q ss_pred EEEcCCCCEEEEEcCCCeEEEEEcc-CCeEeEEeeecCCCCCcceEE-EECCCCCEEE-EEcCCC--cEEEEECCC-Cce
Q 020021 212 VKFSNDGRLMLLTTMEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLEA-SFSPEGMFVI-SGSGDG--SVYAWSVRS-GKE 285 (332)
Q Consensus 212 v~~s~dg~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~v-~~spdg~~l~-sgs~Dg--~i~vWd~~~-~~~ 285 (332)
++|||||+++++++.+|.+++|... .+. ...+. .+...+..+ +|+|||+.|+ +++.|+ .++||++.. ++.
T Consensus 342 ~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~---~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~ 417 (741)
T 2ecf_A 342 LRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT---HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQ 417 (741)
T ss_dssp CEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC---CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCC
T ss_pred eEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee---ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCC
Confidence 8999999998899999977777654 344 44333 233455566 5999998775 555565 899999864 554
Q ss_pred EEEecCCCCCCceEEeCCCeeEEEeccc------eEEEecccc
Q 020021 286 VASWMSFDTEPPVIKWTPGSLMFVTGSS------ELSFWIPDL 322 (332)
Q Consensus 286 ~~~~~~~~~~v~~l~~sp~~~~l~t~~~------d~~~w~~~~ 322 (332)
+..+.. ...+..++|+||+++++.... ++.+++.+.
T Consensus 418 ~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 418 PQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp CEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred eeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence 555554 556789999999988776543 255555443
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=2e-22 Score=178.94 Aligned_cols=263 Identities=10% Similarity=0.042 Sum_probs=191.3
Q ss_pred CEEEEEeCCCcEEEEEcCCCeeeEEeeeccc--ceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeec-c---
Q 020021 47 SYLVTASDDESIRLYDVTAATCLKTINSKKY--GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG-H--- 120 (332)
Q Consensus 47 ~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~-h--- 120 (332)
+++++++.|++|++||+.+++.+..+..... .+..++|+|+++.++++.. .++.|.+||+.+++.+..+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN--KSESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET--TTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC--CCCeEEEEECCCCCeEeeEEcCCccc
Confidence 4789999999999999999999888764432 3678899999988766643 367899999999988776653 2
Q ss_pred -cccEEEEEecCCCCeEEEee------------CCCcEEEEeCCCceEEEEEEecC-ceeEEEcCCCeEEEEEeCCEEEE
Q 020021 121 -HDRVVSLSLCSSKDCFISGS------------LDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGLVFAVAFGGYIRM 186 (332)
Q Consensus 121 -~~~V~~v~~~~~~~~l~s~s------------~Dg~i~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v 186 (332)
...+..++|+|++++++.++ .|+.|.+||+.+++....+.... .....+++++..+.++ ++.|.+
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~ 158 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHV 158 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEE
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEE
Confidence 23567899999999888886 57999999999888776665432 2345677777655444 789999
Q ss_pred EECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCC-C-----------------------eEEEEEccCCeEeE
Q 020021 187 FDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-G-----------------------HIHVLDSFRGTLLS 242 (332)
Q Consensus 187 wd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~d-g-----------------------~i~i~d~~~~~~~~ 242 (332)
||+...+. ...+..... ...+.++|||+.++..+.. + .|.+||+.+++..
T Consensus 159 ~d~~~~~~--~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 232 (337)
T 1pby_B 159 MDPEAGTL--VEDKPIQSW---EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA- 232 (337)
T ss_dssp EETTTTEE--EEEECSTTT---TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-
T ss_pred EECCCCcE--eeeeecccc---CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-
Confidence 99875321 111221111 1223789999866554432 2 4689999988775
Q ss_pred EeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEecc
Q 020021 243 TYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 320 (332)
Q Consensus 243 ~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~ 320 (332)
...... +...+..++|+|||++++++ ++.|++||+.+++.+..+.. ...+.+++|+||++++++++.+ +.+|+.
T Consensus 233 ~~~~~~-~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 233 MREVRI-MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEEEEE-CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred EeecCC-CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 333222 23455679999999999988 79999999999887776654 3467899999999877766554 888877
Q ss_pred cc
Q 020021 321 DL 322 (332)
Q Consensus 321 ~~ 322 (332)
..
T Consensus 309 ~~ 310 (337)
T 1pby_B 309 ET 310 (337)
T ss_dssp TT
T ss_pred cC
Confidence 54
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=8.3e-22 Score=175.43 Aligned_cols=266 Identities=10% Similarity=0.120 Sum_probs=181.1
Q ss_pred ccCCCcEEEEEECCCCCEEEEEeCC-CcEEEEEcC--CCee--eEEeeecccceeEEEEccCCCEEEEecCCCCCceeEE
Q 020021 31 RDYNGRISSMDFHKSSSYLVTASDD-ESIRLYDVT--AATC--LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (332)
Q Consensus 31 ~~h~~~I~~i~~s~dg~~l~tgs~D-~tv~iwd~~--~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v 105 (332)
..|...+.+++|+|+|++|++++.+ ++|++|++. +++. +..+..+. .+..++|+++++.+++++. .++.|.+
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~--~~~~i~~ 110 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSY--NAGNVSV 110 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEET--TTTEEEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEec--CCCeEEE
Confidence 3577789999999999999888887 999999997 5543 34444433 6788999999998877653 2678999
Q ss_pred EEcc---CCceEEEeecccccEEEEEecCCCCeEEEee-CCCcEEEEeCCC-ceEEEE----EEec---CceeEEEcCCC
Q 020021 106 LSLH---DNKYLRYFKGHHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQRA-EKCQGL----LRVQ---GRPAAAYDDQG 173 (332)
Q Consensus 106 ~d~~---~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s-~Dg~i~iWd~~~-~~~~~~----~~~~---~~~~~~~~~~~ 173 (332)
||+. ..+.+..+..+ ..+.+++|+|+++++++++ .|+.|++||+.+ ++.... +... ......+++++
T Consensus 111 ~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 111 TRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp EEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred EECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence 9994 33444555444 4588899999999888777 899999999987 544322 2221 12245677877
Q ss_pred eEE-EEE-eCCEEEEEECccCCCCCee---EEE-ecCC---CCCceeEEEcCCCCEEE-EEcCCCeEEEEEcc--CC--e
Q 020021 174 LVF-AVA-FGGYIRMFDARKYEKGPFD---IFS-VGGD---ISDANVVKFSNDGRLML-LTTMEGHIHVLDSF--RG--T 239 (332)
Q Consensus 174 ~~~-~~~-~~~~i~vwd~~~~~~~~~~---~~~-~~~~---~~~v~~v~~s~dg~~l~-~~~~dg~i~i~d~~--~~--~ 239 (332)
..+ .+. .++.|++||+.... +.+. ... .... ...+..++|+|||++++ +...++.|++||+. ++ +
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~ 268 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKDPH-GNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS 268 (343)
T ss_dssp SEEEEEETTTTEEEEEESSCTT-SCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEE
T ss_pred CEEEEEeCCCCEEEEEEecCCC-CcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceE
Confidence 644 444 47899999986422 1221 111 1100 12345799999998776 45589999999997 33 3
Q ss_pred EeEEeeecCCCCCcceEEEECCCCCEEEEEc-CCCcEEEEEC--CCCce--EEEecCCCCCCceEEeCCCee
Q 020021 240 LLSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVYAWSV--RSGKE--VASWMSFDTEPPVIKWTPGSL 306 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs-~Dg~i~vWd~--~~~~~--~~~~~~~~~~v~~l~~sp~~~ 306 (332)
.+..+. .+ ..+..++|+|||++|++++ .|+.|.+|++ .+++. +..+.. ...+.+++|.|+.+
T Consensus 269 ~~~~~~---~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 269 KEGFQP---TE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHEG 335 (343)
T ss_dssp EEEEEE---CS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC-
T ss_pred Eeeeec---CC-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcccC
Confidence 333332 12 2266799999999888887 6899999954 45543 333333 34577888887654
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=1.8e-21 Score=174.46 Aligned_cols=271 Identities=12% Similarity=0.133 Sum_probs=177.3
Q ss_pred CCCcEEEEEcC--CCeeeE-EeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCc--eEEEeecccccEEEEE
Q 020021 54 DDESIRLYDVT--AATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK--YLRYFKGHHDRVVSLS 128 (332)
Q Consensus 54 ~D~tv~iwd~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~--~~~~~~~h~~~V~~v~ 128 (332)
.++.+.+|+++ +++... ....+...+..++|+|+++ +++++..+.++.|.+||+.+++ .+..+..|...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 45677777664 565433 2233444567799999998 6655432336799999998766 3444556778889999
Q ss_pred ecCCCCeEEEee-CCCcEEEEeCCC-ceE--EEEEEecC-----------ceeEEEcCCCeEEEEEe-CCEEEEEECccC
Q 020021 129 LCSSKDCFISGS-LDRTVLLWDQRA-EKC--QGLLRVQG-----------RPAAAYDDQGLVFAVAF-GGYIRMFDARKY 192 (332)
Q Consensus 129 ~~~~~~~l~s~s-~Dg~i~iWd~~~-~~~--~~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~i~vwd~~~~ 192 (332)
|+|++++|++++ .++++++||+.. +.. ...+.... .....+++++.++++.. ++.|++|++...
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 999999888887 789999999853 222 22222111 12367788777555544 679999998721
Q ss_pred CCCCeeEE-EecC-CCCCceeEEEcCCCCEEEE-EcCCCeEEEEEccC--CeEeEEeeecCCC-----CCcceEEEECCC
Q 020021 193 EKGPFDIF-SVGG-DISDANVVKFSNDGRLMLL-TTMEGHIHVLDSFR--GTLLSTYNVKPVS-----RNSTLEASFSPE 262 (332)
Q Consensus 193 ~~~~~~~~-~~~~-~~~~v~~v~~s~dg~~l~~-~~~dg~i~i~d~~~--~~~~~~~~~~~~~-----~~~~~~v~~spd 262 (332)
+.+... .... .......++|+|||+++++ +..++.|.+|++.. ++........... ...+..++|+||
T Consensus 173 --g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 173 --GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp --SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred --CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 222211 1111 1124577999999995554 67789999999874 5542221111111 134667999999
Q ss_pred CCEE-EEEcCCCcEEEEECCCC---ceEEEecCCCCCCceEEeCCCeeEEEeccc---eEEEecc--ccccccc
Q 020021 263 GMFV-ISGSGDGSVYAWSVRSG---KEVASWMSFDTEPPVIKWTPGSLMFVTGSS---ELSFWIP--DLSKLGA 327 (332)
Q Consensus 263 g~~l-~sgs~Dg~i~vWd~~~~---~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~---d~~~w~~--~~~~~~~ 327 (332)
|++| ++...++.|.+|++... +.+..+..+...+..++|+||+++|++++. .+.+|.. +..+|.+
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 9987 45566899999999732 445556666667899999999987766543 3888954 4444443
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=2.1e-22 Score=197.47 Aligned_cols=277 Identities=11% Similarity=0.059 Sum_probs=193.3
Q ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC---
Q 020021 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD--- 110 (332)
Q Consensus 34 ~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~--- 110 (332)
...|.+++|||| ++++.+ .|+++++||+.+++.... ..+...+..++|+|+++.++++. ++.|++||+.+
T Consensus 81 ~~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG~~la~~~----~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 81 AFPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYL-FDTNEETASLDFSPVGDRVAYVR----NHNLYIARGGKLGE 153 (706)
T ss_dssp -CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEE-ECCTTCCTTCEECTTSSEEEEEE----TTEEEEEECBCTTS
T ss_pred ccCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEc-cCCcccccCCcCCCCCCEEEEEE----CCeEEEEecCcccc
Confidence 367999999999 666554 469999999998876543 34455677889999999998863 68999999998
Q ss_pred --CceEEEeeccccc--------------EEEEEecCCCCeEEEee---------------------------------C
Q 020021 111 --NKYLRYFKGHHDR--------------VVSLSLCSSKDCFISGS---------------------------------L 141 (332)
Q Consensus 111 --~~~~~~~~~h~~~--------------V~~v~~~~~~~~l~s~s---------------------------------~ 141 (332)
++.......+... +.++.|+|||++|++++ .
T Consensus 154 ~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 154 GMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp CCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred cCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 8776655555443 37899999999999998 4
Q ss_pred CCcEEEEeCCCceEEEEEEec----CceeEEEcCCCeEEE-EEeCC-----EEEEEECccCCCCCeeEEEecCCC---CC
Q 020021 142 DRTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFA-VAFGG-----YIRMFDARKYEKGPFDIFSVGGDI---SD 208 (332)
Q Consensus 142 Dg~i~iWd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~-----~i~vwd~~~~~~~~~~~~~~~~~~---~~ 208 (332)
+..|.+||+.+++........ ......+++++..++ +..++ .|.+||+.... ........... ..
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVETDKHYVEP 311 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEECSSCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEccCCCeECc
Confidence 468999999988765433211 123467788886444 44554 89999987541 11111111111 12
Q ss_pred ceeEEEcC--CCCEEEEEcCCCeEEEEEcc-CCeEeEEeeecCCCCCcceE-EEECCCCCEEEEEcC-CC----cEEEEE
Q 020021 209 ANVVKFSN--DGRLMLLTTMEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLE-ASFSPEGMFVISGSG-DG----SVYAWS 279 (332)
Q Consensus 209 v~~v~~s~--dg~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~-v~~spdg~~l~sgs~-Dg----~i~vWd 279 (332)
+..++||| ||++++++..++.+++|++. .+..+..+. .+...+.. ++|+|||+.|+.++. ++ .|+.||
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~---~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT---KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC---CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred cCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC---CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 35689999 99999999999999998876 555555443 23344555 799999988766544 44 677778
Q ss_pred CCCCceEEEecCCCCCCceEEeCCCeeEEEeccc------eEEEecccccc
Q 020021 280 VRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS------ELSFWIPDLSK 324 (332)
Q Consensus 280 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~------d~~~w~~~~~~ 324 (332)
+.+++ +..+. +...+..++|+||+++++.... ++.+|+.+..+
T Consensus 389 ~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 389 IKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred cCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 77765 34443 5667889999999988776533 27777765443
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=6.1e-23 Score=197.16 Aligned_cols=269 Identities=11% Similarity=0.063 Sum_probs=187.1
Q ss_pred CCcEEEEEECCCCCEEEEEeC-CCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC--
Q 020021 34 NGRISSMDFHKSSSYLVTASD-DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-- 110 (332)
Q Consensus 34 ~~~I~~i~~s~dg~~l~tgs~-D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~-- 110 (332)
..+|.+++|+|||++||+++. |++++||++.+++..+....+...+..++|+|+ +.++++...+-+...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 457999999999999999887 999999999777665444333356888899988 4444443212255567765543
Q ss_pred -CceEEEeecccccEEEEEecCCCC--eEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEE-EEeC----C
Q 020021 111 -NKYLRYFKGHHDRVVSLSLCSSKD--CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFA-VAFG----G 182 (332)
Q Consensus 111 -~~~~~~~~~h~~~V~~v~~~~~~~--~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~ 182 (332)
+... .+..+. .+...+|+|+++ .+++++.|+. .+||+.++++......+. ....+++++..++ ++.+ .
T Consensus 100 ~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~-~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 100 PGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRV-ALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCE-EEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEE
T ss_pred CCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCc-eEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCe
Confidence 2222 333222 233557888776 4555555555 599998887766555444 5567778776665 4444 6
Q ss_pred EEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCC--eEEEEEccCCeEeEEeeecCCCCCcceEEE--
Q 020021 183 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG--HIHVLDSFRGTLLSTYNVKPVSRNSTLEAS-- 258 (332)
Q Consensus 183 ~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~-- 258 (332)
.|++||+...+ .. .+..+...+..++|||||+.++++..++ +|++||+.+++.. .+. .+...+..++
T Consensus 176 ~i~~~d~~~g~---~~--~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~---~~~~~~~~~~~~ 246 (582)
T 3o4h_A 176 SLFTSNLSSGG---LR--VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE---LPSKDFSSYRPT 246 (582)
T ss_dssp EEEEEETTTCC---CE--EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC---CSCSHHHHHCCS
T ss_pred EEEEEcCCCCC---ce--EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc---CCCcChhhhhhc
Confidence 79999986533 22 2334555678899999999999888888 8999999988766 332 2334444556
Q ss_pred ------ECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce---EEEecccc
Q 020021 259 ------FSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE---LSFWIPDL 322 (332)
Q Consensus 259 ------~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d---~~~w~~~~ 322 (332)
|||||+.+++++.|+++++|++ ++... ...+.+..++|+ +++++++++.+ -.+|.++.
T Consensus 247 ~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp EEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred cccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 9999999999999999999999 66544 233567889999 99888887765 45555544
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=1.1e-20 Score=168.05 Aligned_cols=277 Identities=10% Similarity=0.106 Sum_probs=183.4
Q ss_pred cccceeEeccCCCcEEEEEECCCCCEEEEEeC-CCcEEEEEcCCCee-eEEeeecccceeEEEEccCCCEEEEecCCCCC
Q 020021 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASD-DESIRLYDVTAATC-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD 100 (332)
Q Consensus 23 ~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~-D~tv~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d 100 (332)
+.+....+..+...+ +++|+|+|++++.++. |+.|.+||+.+++. ...+..+..+...++|+|+++.++++...+.+
T Consensus 29 ~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 107 (331)
T 3u4y_A 29 TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHP 107 (331)
T ss_dssp TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSS
T ss_pred ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCc
Confidence 345556666666777 9999999997666555 89999999999887 66666665555558999999988843321111
Q ss_pred ceeEEEEccCCceEEEeecccccEEEEEecCCCCeEE-EeeCCCc-EEEEeCCCceEEE-----EEEe-cCceeEEEcCC
Q 020021 101 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRT-VLLWDQRAEKCQG-----LLRV-QGRPAAAYDDQ 172 (332)
Q Consensus 101 ~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~-s~s~Dg~-i~iWd~~~~~~~~-----~~~~-~~~~~~~~~~~ 172 (332)
+.|.+||+.+++.+..+..+ ....+++|+|++++++ +...++. |.+|++....... .+.. .......++++
T Consensus 108 ~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spd 186 (331)
T 3u4y_A 108 FNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPD 186 (331)
T ss_dssp CEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTT
T ss_pred ccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCC
Confidence 28999999999888777654 4468999999998555 4456688 9999987533221 1111 12235677888
Q ss_pred CeEE-EEE-eCCEEEEEECccCCCC-CeeEEEecCCCCCceeEEEcCCCCEEEEE-cCCCeEEEEEccCCeE--eEEeee
Q 020021 173 GLVF-AVA-FGGYIRMFDARKYEKG-PFDIFSVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTL--LSTYNV 246 (332)
Q Consensus 173 ~~~~-~~~-~~~~i~vwd~~~~~~~-~~~~~~~~~~~~~v~~v~~s~dg~~l~~~-~~dg~i~i~d~~~~~~--~~~~~~ 246 (332)
+..+ .+. .++.|++||+...+.. ....+.. ...+..++|+|||++++++ ..++.|.+||..+++. +..+..
T Consensus 187 g~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~ 263 (331)
T 3u4y_A 187 GNFAFVANLIGNSIGILETQNPENITLLNAVGT---NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGH 263 (331)
T ss_dssp SSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC---SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEEC
T ss_pred CCEEEEEeCCCCeEEEEECCCCcccceeeeccC---CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccc
Confidence 8644 444 3689999998754320 0222222 2456789999999976655 4578899999998887 333321
Q ss_pred c----CCCCCcceEEEECCCCCEEEEEc-CCCcEEEEECCCCceEEEecCCCCCCceEEeCCCe
Q 020021 247 K----PVSRNSTLEASFSPEGMFVISGS-GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS 305 (332)
Q Consensus 247 ~----~~~~~~~~~v~~spdg~~l~sgs-~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~ 305 (332)
. +........++|+|||++|+.++ .++.|++||+.+. .+.....+...-....++|+.
T Consensus 264 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~-~~~~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 264 GLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK-VVGYVAGIEANGGIAICHPDK 326 (331)
T ss_dssp CCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC-EEEECTTCCCBSCEEECCCC-
T ss_pred ccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC-cccceecccccCCeEEECCcc
Confidence 1 11111123479999999886654 5669999999764 345444444333334456654
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=1.4e-23 Score=206.30 Aligned_cols=279 Identities=10% Similarity=0.056 Sum_probs=193.6
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeeccc---ceeEEEEccCCCEEEEecCCC------CCceeEEE
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY---GVDLVCFTSHPTTVIYSSKNG------WDESLRLL 106 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~s~~g------~d~~v~v~ 106 (332)
.+.+++|+|||+++++ +.|++|++||+.++++...+..+.. .+..++|+|+++.+++++... .++.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678899999998876 7899999999999998877776654 488999999999998886421 23789999
Q ss_pred EccCCceEEEe---ecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--c-----------------
Q 020021 107 SLHDNKYLRYF---KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--R----------------- 164 (332)
Q Consensus 107 d~~~~~~~~~~---~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~----------------- 164 (332)
|+.+++. ..+ .+|...+..++|+|||+.|++++. +.|++||..+++......... .
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC
Confidence 9998875 333 345556889999999999999986 799999998877654443211 1
Q ss_pred -eeEEEcCCCeEEEEE-eCC----------------------------------EEEEEECccCCCCCeeEEEecC----
Q 020021 165 -PAAAYDDQGLVFAVA-FGG----------------------------------YIRMFDARKYEKGPFDIFSVGG---- 204 (332)
Q Consensus 165 -~~~~~~~~~~~~~~~-~~~----------------------------------~i~vwd~~~~~~~~~~~~~~~~---- 204 (332)
....+++++..++.+ .++ .|++||+...+. .. .+..
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~--~~--~l~~~~~~ 250 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH--DL--EMMPPDDP 250 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC--CE--ECCCCCCG
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce--eE--EeeCCccC
Confidence 346788888655443 332 788888865431 01 1111
Q ss_pred --CCCCceeEEEcCCCCEEEEEcC----CCeEEEEEccCCeEeEEeeecCCCCCcc----eEEEECCCCCEEEE--EcCC
Q 020021 205 --DISDANVVKFSNDGRLMLLTTM----EGHIHVLDSFRGTLLSTYNVKPVSRNST----LEASFSPEGMFVIS--GSGD 272 (332)
Q Consensus 205 --~~~~v~~v~~s~dg~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~----~~v~~spdg~~l~s--gs~D 272 (332)
+...+..++|||||+++++... +..|++||+.+++....+... +...+ ..++|||||++|+. ...|
T Consensus 251 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~--~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 328 (723)
T 1xfd_A 251 RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE--SEAWLHRQNEEPVFSKDGRKFFFIRAIPQ 328 (723)
T ss_dssp GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE--CSSCCCCCCCCCEECTTSCSEEEEEEECC
T ss_pred CCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec--cCCEEeccCCCceEcCCCCeEEEEEeccc
Confidence 1235678999999998876643 357999999988876544321 11221 26799999997775 4566
Q ss_pred C------cEEEEE-CCCCc--eEEEecCCCCCCce-EEeCCCeeEEEecc-----ceEEEeccccc
Q 020021 273 G------SVYAWS-VRSGK--EVASWMSFDTEPPV-IKWTPGSLMFVTGS-----SELSFWIPDLS 323 (332)
Q Consensus 273 g------~i~vWd-~~~~~--~~~~~~~~~~~v~~-l~~sp~~~~l~t~~-----~d~~~w~~~~~ 323 (332)
+ .|++|| ..+++ +...+......+.. ++|+||++.|+..+ ...++|..+..
T Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 329 GGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp SSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred CCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 6 577777 34443 14444433333443 68999998876543 23889987653
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=8.6e-22 Score=174.89 Aligned_cols=257 Identities=12% Similarity=0.014 Sum_probs=184.5
Q ss_pred ccceeEecc-CCC-cEEEEEECCCCCEE-EEEeCCCcEEEEEcCCCeeeEEeeecc-----cceeEEEEccCCCEEEEec
Q 020021 24 MEVGMSFRD-YNG-RISSMDFHKSSSYL-VTASDDESIRLYDVTAATCLKTINSKK-----YGVDLVCFTSHPTTVIYSS 95 (332)
Q Consensus 24 ~~~~~~l~~-h~~-~I~~i~~s~dg~~l-~tgs~D~tv~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~s 95 (332)
.+..+.+.. +.. .+..++|+|+|+++ ++++.++.|.+||+.+++.+..+.... ..+..++|+++++.++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 100 (337)
T 1pby_B 21 MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYE 100 (337)
T ss_dssp TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEE
T ss_pred CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEe
Confidence 344555542 322 47889999999765 566778999999999999887765422 2466789999999888774
Q ss_pred CC------C---CCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC-ce
Q 020021 96 KN------G---WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RP 165 (332)
Q Consensus 96 ~~------g---~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~-~~ 165 (332)
.. . .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+.+ ++.|.+||+.+++....+.... ..
T Consensus 101 ~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~ 177 (337)
T 1pby_B 101 SPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEA 177 (337)
T ss_dssp EEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTT
T ss_pred cccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCC
Confidence 10 1 258999999999887777664 3457788999999988887 6899999999888766554332 11
Q ss_pred eEEEcCCCeEEEEEe--CC-----------------------EEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCE
Q 020021 166 AAAYDDQGLVFAVAF--GG-----------------------YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRL 220 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~--~~-----------------------~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 220 (332)
...+++++..+.... ++ .|.+||....+. .......+...+..++|+|||++
T Consensus 178 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~ 254 (337)
T 1pby_B 178 ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM---AMREVRIMDVFYFSTAVNPAKTR 254 (337)
T ss_dssp TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE---EEEEEEECSSCEEEEEECTTSSE
T ss_pred CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc---eEeecCCCCCceeeEEECCCCCE
Confidence 113333333221111 11 578999876432 12223333345678999999999
Q ss_pred EEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCC
Q 020021 221 MLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF 292 (332)
Q Consensus 221 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~ 292 (332)
++++ ++.|++||+.+++.+..+... ..+..++|+|||++|++++.|+.|++||+.+++.+..+...
T Consensus 255 l~~~--~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 255 AFGA--YNVLESFDLEKNASIKRVPLP----HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEEE--ESEEEEEETTTTEEEEEEECS----SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred EEEe--CCeEEEEECCCCcCcceecCC----CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 8888 799999999999887766532 34568999999999999999999999999999888777544
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=2e-22 Score=206.19 Aligned_cols=270 Identities=10% Similarity=0.044 Sum_probs=202.1
Q ss_pred eeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCC-CeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEE
Q 020021 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (332)
Q Consensus 27 ~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v 105 (332)
...+.+|.+.+.++.|+++ .++++++.|++++||.+.. +.....+..+. .+...+|+|+++.++++. ++.+.+
T Consensus 196 ~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~----~~~i~~ 269 (1045)
T 1k32_A 196 FKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK----GGSIYI 269 (1045)
T ss_dssp EEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE----TTEEEE
T ss_pred eEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe----CCEEEE
Confidence 3456899999999999988 6778889999999998753 44445555544 355679999999888874 678999
Q ss_pred EEccCCceEEEeec-----------ccccEEEEEec-CCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcC
Q 020021 106 LSLHDNKYLRYFKG-----------HHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDD 171 (332)
Q Consensus 106 ~d~~~~~~~~~~~~-----------h~~~V~~v~~~-~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~ 171 (332)
||++... +..+.+ |...+..++|+ |+|++|++++ ++.+.+|+...+.......... .....++
T Consensus 270 ~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 270 FNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD- 346 (1045)
T ss_dssp ECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-
T ss_pred ecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-
Confidence 9995443 345554 45578999999 9999999888 7899999988776443221111 1234455
Q ss_pred CCeEEE-EEeCCEEE-EEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC
Q 020021 172 QGLVFA-VAFGGYIR-MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV 249 (332)
Q Consensus 172 ~~~~~~-~~~~~~i~-vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 249 (332)
++..++ ++.+..+. +||+.... . ..+.++...+..++|||||+.+++++.++.|++||+.+++...... .
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~---~--~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~---~ 418 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGK---A--EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER---S 418 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCC---E--EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---C
T ss_pred CCCeEEEEECCCceEEEEECCCCC---c--eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc---C
Confidence 554444 44456677 77875422 1 1222455678899999999999999999999999999988765553 3
Q ss_pred CCCcceEEEECCCCCEEEEEcCCC----------cEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce
Q 020021 250 SRNSTLEASFSPEGMFVISGSGDG----------SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 314 (332)
Q Consensus 250 ~~~~~~~v~~spdg~~l~sgs~Dg----------~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d 314 (332)
+...+..++|||||++|++++.++ .|++||+.+++ +..+..|...+..++|+|||+.|+.++.+
T Consensus 419 ~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 419 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESC
T ss_pred CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecc
Confidence 445667899999999999987754 99999998876 67777787778889999999988877653
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=1.2e-22 Score=199.27 Aligned_cols=283 Identities=10% Similarity=0.098 Sum_probs=188.4
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeee-EEeeecc-----------------cceeEEEEc
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL-KTINSKK-----------------YGVDLVCFT 85 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~-~~~~~~~-----------------~~v~~~~~~ 85 (332)
.+....|..+. +..+.|+ |+.+++++.|+ | +||+.+++.+ ..+..+. ..+..++|+
T Consensus 17 ~~~~~~~~~~~--~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~s 90 (706)
T 2z3z_A 17 GKEFYNFYPEY--VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDA 90 (706)
T ss_dssp -------------CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEET
T ss_pred ccccccccccc--CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEEC
Confidence 34444555543 4556777 67788888888 8 9999999873 4444332 458899999
Q ss_pred cCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCC-----ceEEEEEE
Q 020021 86 SHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-----EKCQGLLR 160 (332)
Q Consensus 86 ~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~-----~~~~~~~~ 160 (332)
|+ ..++++. ++.+++||+.+++.. .+..|...+..++|+|||++|+++ .|+.|++||+.+ ++......
T Consensus 91 pd-~~~~~~~----~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 91 GR-GLVVLFT----QGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp TT-TEEEEEE----TTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCS
T ss_pred CC-CeEEEEE----CCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEecc
Confidence 99 7777664 579999999887654 445577788899999999999985 789999999987 66544332
Q ss_pred ecCc----------------eeEEEcCCCeEEEEEe----------------------------------CCEEEEEECc
Q 020021 161 VQGR----------------PAAAYDDQGLVFAVAF----------------------------------GGYIRMFDAR 190 (332)
Q Consensus 161 ~~~~----------------~~~~~~~~~~~~~~~~----------------------------------~~~i~vwd~~ 190 (332)
.... ....+++++..++.+. +..|.+||+.
T Consensus 164 ~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~ 243 (706)
T 2z3z_A 164 DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA 243 (706)
T ss_dssp CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT
T ss_pred CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC
Confidence 2211 4567888886555443 2579999986
Q ss_pred cCCCCCeeEEEe-cCCCCCceeEEEcCCCCEEEEEcCCC-----eEEEEEccCC-eEeEEeeec-CCCCCcceEEEECC-
Q 020021 191 KYEKGPFDIFSV-GGDISDANVVKFSNDGRLMLLTTMEG-----HIHVLDSFRG-TLLSTYNVK-PVSRNSTLEASFSP- 261 (332)
Q Consensus 191 ~~~~~~~~~~~~-~~~~~~v~~v~~s~dg~~l~~~~~dg-----~i~i~d~~~~-~~~~~~~~~-~~~~~~~~~v~~sp- 261 (332)
..+. ..... ..+...+..++|||||+.+++++.++ .|++||+.++ ......... ......+..++|+|
T Consensus 244 ~~~~---~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~ 320 (706)
T 2z3z_A 244 TGKT---VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPG 320 (706)
T ss_dssp TTEE---EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTT
T ss_pred CCce---EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecC
Confidence 5321 11111 12334578899999999999887775 8999999988 433222111 11112235679999
Q ss_pred -CCCEEEEEcCCCcEEEEECC-CCceEEEecCCCCCCce-EEeCCCeeEEEec-cce----EEEecccc
Q 020021 262 -EGMFVISGSGDGSVYAWSVR-SGKEVASWMSFDTEPPV-IKWTPGSLMFVTG-SSE----LSFWIPDL 322 (332)
Q Consensus 262 -dg~~l~sgs~Dg~i~vWd~~-~~~~~~~~~~~~~~v~~-l~~sp~~~~l~t~-~~d----~~~w~~~~ 322 (332)
||+++++++.||.++||++. +++.+..+..+...+.. ++|+||++.|+.+ ..+ ..+|.++.
T Consensus 321 ~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 321 SNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred CCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 99999999999999999886 66777777777766766 7999999766544 332 57777654
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=3.2e-22 Score=196.59 Aligned_cols=286 Identities=8% Similarity=0.043 Sum_probs=192.9
Q ss_pred eeEecHHHHhcccceeEeccCCC---cEEEEEECCCCCEEEEEeCC---------CcEEEEEcCCCeeeEEee---eccc
Q 020021 13 SLELSEEILQSMEVGMSFRDYNG---RISSMDFHKSSSYLVTASDD---------ESIRLYDVTAATCLKTIN---SKKY 77 (332)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~h~~---~I~~i~~s~dg~~l~tgs~D---------~tv~iwd~~~~~~~~~~~---~~~~ 77 (332)
.+.+++. .+.+....+.+|.. .|.+++|||||++|++++.| +++.+||+.++++ ..+. .+..
T Consensus 38 ~i~~~d~--~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~ 114 (723)
T 1xfd_A 38 TVRLWNV--ETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNA 114 (723)
T ss_dssp CEEEBCG--GGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSC
T ss_pred CEEEEEC--CCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccc
Confidence 4556553 23344566777775 49999999999999999875 6788999998876 3333 2333
Q ss_pred ceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccE------------------EEEEecCCCCeEEEe
Q 020021 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRV------------------VSLSLCSSKDCFISG 139 (332)
Q Consensus 78 ~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V------------------~~v~~~~~~~~l~s~ 139 (332)
.+..++|+|+++.+++++ ++.|++||+.+++.......+...+ .++.|+|||++|+++
T Consensus 115 ~~~~~~~SPdG~~la~~~----~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~ 190 (723)
T 1xfd_A 115 KLQYAGWGPKGQQLIFIF----ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYA 190 (723)
T ss_dssp CCSBCCBCSSTTCEEEEE----TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEE
T ss_pred cccccEECCCCCEEEEEE----CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEE
Confidence 477889999999999886 3689999999988777666554433 789999999999999
Q ss_pred eCCC----------------------------------cEEEEeCCCceEEEEEEec--------CceeEEEcCCCeEEE
Q 020021 140 SLDR----------------------------------TVLLWDQRAEKCQGLLRVQ--------GRPAAAYDDQGLVFA 177 (332)
Q Consensus 140 s~Dg----------------------------------~i~iWd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 177 (332)
+.|+ +|++||+.++++...+..+ ......+++++.+++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~ 270 (723)
T 1xfd_A 191 AINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAV 270 (723)
T ss_dssp EEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEE
T ss_pred EECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEE
Confidence 8664 7999999887653333321 123467788887665
Q ss_pred EEe-C----CEEEEEECccCCCCCeeEEEecCCCCCc----eeEEEcCCCCEEEE--EcCCC------eEEEEE-ccCCe
Q 020021 178 VAF-G----GYIRMFDARKYEKGPFDIFSVGGDISDA----NVVKFSNDGRLMLL--TTMEG------HIHVLD-SFRGT 239 (332)
Q Consensus 178 ~~~-~----~~i~vwd~~~~~~~~~~~~~~~~~~~~v----~~v~~s~dg~~l~~--~~~dg------~i~i~d-~~~~~ 239 (332)
... . ..|++||+...+. ...... .+...+ ..++|||||+.++. +..++ +|++|| ...++
T Consensus 271 ~~~~~~~~~~~i~~~d~~~g~~--~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 271 TWLNRAQNVSILTLCDATTGVC--TKKHED-ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp EEEETTSCEEEEEEEETTTCCE--EEEEEE-ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred EEEcCCCCeEEEEEEeCCCCcc--eEEEEe-ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 442 2 4799999865321 111111 111112 36899999997665 45566 577777 34433
Q ss_pred E--eEEeeecCCCCCcceE-EEECCCCCEEEEEcCC---CcEEEEECCCCc--eEEEecC---CCCCCceEEeCCCeeEE
Q 020021 240 L--LSTYNVKPVSRNSTLE-ASFSPEGMFVISGSGD---GSVYAWSVRSGK--EVASWMS---FDTEPPVIKWTPGSLMF 308 (332)
Q Consensus 240 ~--~~~~~~~~~~~~~~~~-v~~spdg~~l~sgs~D---g~i~vWd~~~~~--~~~~~~~---~~~~v~~l~~sp~~~~l 308 (332)
. ...+. .. ...+.. ++|||||++|+..+.+ +.++||++.... ....+.. |...+..++|+||++.+
T Consensus 348 ~~~~~~l~--~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l 424 (723)
T 1xfd_A 348 NDNIQSIT--SG-DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFF 424 (723)
T ss_dssp SCCCCBSC--CS-SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEE
T ss_pred ccceeEee--cC-CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEE
Confidence 0 22222 11 122333 6899999999766555 789999986432 2333433 56678899999999877
Q ss_pred Eec
Q 020021 309 VTG 311 (332)
Q Consensus 309 ~t~ 311 (332)
+..
T Consensus 425 ~~~ 427 (723)
T 1xfd_A 425 LLK 427 (723)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=6e-21 Score=171.09 Aligned_cols=250 Identities=12% Similarity=0.166 Sum_probs=167.2
Q ss_pred eccCCCcEEEEEECCCCCEEEEEeC---CCcEEEEEcCCCe--eeEEeeecccceeEEEEccCCCEEEEecCCCCCceeE
Q 020021 30 FRDYNGRISSMDFHKSSSYLVTASD---DESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (332)
Q Consensus 30 l~~h~~~I~~i~~s~dg~~l~tgs~---D~tv~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~ 104 (332)
+..+...+..++|+|||+ |++++. |+.|.+||+.+++ .+..+..+...+..++|+|+++.+++++. .++.++
T Consensus 35 ~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~--~~~~v~ 111 (347)
T 3hfq_A 35 LLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANY--HKGTAE 111 (347)
T ss_dssp EEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEET--TTTEEE
T ss_pred eeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeC--CCCEEE
Confidence 344556778899999999 554444 6899999998776 34444455666788999999998887753 368999
Q ss_pred EEEccC-Cc--eEEEeec---------ccccEEEEEecCCCCeEEEeeCCCcEEEEeCC-CceEEEEE--Eec---Ccee
Q 020021 105 LLSLHD-NK--YLRYFKG---------HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR-AEKCQGLL--RVQ---GRPA 166 (332)
Q Consensus 105 v~d~~~-~~--~~~~~~~---------h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~-~~~~~~~~--~~~---~~~~ 166 (332)
+|++.. +. .+..+.. +...+.+++|+|+++.+++...++.|++||+. +++..... ... ....
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 999963 32 2222221 12348899999999977777788999999998 44433221 211 1224
Q ss_pred EEEcCCCeEEEEE--eCCEEEEEECccCCCCCeeEE-EecCCC------CCceeEEEcCCCCEE-EEEcCCCeEEEEEcc
Q 020021 167 AAYDDQGLVFAVA--FGGYIRMFDARKYEKGPFDIF-SVGGDI------SDANVVKFSNDGRLM-LLTTMEGHIHVLDSF 236 (332)
Q Consensus 167 ~~~~~~~~~~~~~--~~~~i~vwd~~~~~~~~~~~~-~~~~~~------~~v~~v~~s~dg~~l-~~~~~dg~i~i~d~~ 236 (332)
..+++++..+.++ .++.|++|++.... +.+... ...... ..+..++|+|||+++ ++...++.|.+||+.
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDTQT-GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTT-TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCC-CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 6788888744443 36899999986421 122111 111111 236779999999976 556678999999986
Q ss_pred C-C--eEeEEeeecCCCCCcceEEEECCCCCEEEEEcCC-CcEEEE--ECCCCceE
Q 020021 237 R-G--TLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD-GSVYAW--SVRSGKEV 286 (332)
Q Consensus 237 ~-~--~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~D-g~i~vW--d~~~~~~~ 286 (332)
. + +.+..+. .+...+..++|+|||++|++++.+ +.|.+| |..+++..
T Consensus 271 ~~g~~~~~~~~~---~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 271 ADGHLTLIQQIS---TEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp GGGCEEEEEEEE---CSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCCcEEEeEEEe---cCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 2 2 3333332 223446689999999998888754 899999 54556543
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=2.5e-20 Score=168.05 Aligned_cols=249 Identities=12% Similarity=0.165 Sum_probs=163.1
Q ss_pred CCCcEEEEEECCCCCEEEEEeCC----CcEEEEEcCC--Cee--eEEeeecccceeEEEEccCCCEEEEecCCCCCceeE
Q 020021 33 YNGRISSMDFHKSSSYLVTASDD----ESIRLYDVTA--ATC--LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (332)
Q Consensus 33 h~~~I~~i~~s~dg~~l~tgs~D----~tv~iwd~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~ 104 (332)
|...+..++|+|||++|++++.| +++.+|++.. ++. +.....+......+++ +++.++++.. .++.+.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~--~~~~v~ 123 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANY--SGGSIT 123 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEET--TTTEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEEC--CCCEEE
Confidence 67778889999999999999986 7999998865 443 2333333334455555 7777776653 378999
Q ss_pred EEEccCCceEEEe------e--------cccccEEEEEecCCCCeEEEe-eCCCcEEEEeCCCceE------EEEEEecC
Q 020021 105 LLSLHDNKYLRYF------K--------GHHDRVVSLSLCSSKDCFISG-SLDRTVLLWDQRAEKC------QGLLRVQG 163 (332)
Q Consensus 105 v~d~~~~~~~~~~------~--------~h~~~V~~v~~~~~~~~l~s~-s~Dg~i~iWd~~~~~~------~~~~~~~~ 163 (332)
+|++.....+..+ . .+...+.+++|+|++++++.+ ..++.|++|++..... .... .
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~---~ 200 (361)
T 3scy_A 124 VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK---G 200 (361)
T ss_dssp EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE---E
T ss_pred EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec---c
Confidence 9999754332211 1 123346789999999966554 4588999998764321 1000 0
Q ss_pred ceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEc-CCCeEEEEEccCCeEe-
Q 020021 164 RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLL- 241 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~-~dg~i~i~d~~~~~~~- 241 (332)
....... ........++|+|||+++++++ .++.|.+||+.++++.
T Consensus 201 -------------------~~~~~~~--------------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~ 247 (361)
T 3scy_A 201 -------------------TPEAFKV--------------APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDE 247 (361)
T ss_dssp -------------------EEEEEEC--------------CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEE
T ss_pred -------------------cccceec--------------CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEE
Confidence 0000000 0112346789999999776665 7899999999877653
Q ss_pred -EEeeecCCCCCcceEEEECCCCCEEEEEcC--CCcEEEEECC--CCc--eEEEecCCCCCCceEEeCCCeeEEEeccc-
Q 020021 242 -STYNVKPVSRNSTLEASFSPEGMFVISGSG--DGSVYAWSVR--SGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSS- 313 (332)
Q Consensus 242 -~~~~~~~~~~~~~~~v~~spdg~~l~sgs~--Dg~i~vWd~~--~~~--~~~~~~~~~~~v~~l~~sp~~~~l~t~~~- 313 (332)
..+...+.+......++|+|||++|+.+.. ++.|.+|++. +++ .+..+.. ...+..++|+||+++|++++.
T Consensus 248 ~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 248 IQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp EEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETT
T ss_pred eEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECC
Confidence 223222223344568999999999977655 4899999995 444 3444444 557889999999987766652
Q ss_pred --eEEEecccc
Q 020021 314 --ELSFWIPDL 322 (332)
Q Consensus 314 --d~~~w~~~~ 322 (332)
.+.+|.++.
T Consensus 327 ~~~v~v~~~d~ 337 (361)
T 3scy_A 327 TNVIQIFERDQ 337 (361)
T ss_dssp TTEEEEEEECT
T ss_pred CCCEEEEEEEC
Confidence 388876653
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=1.6e-20 Score=167.68 Aligned_cols=242 Identities=10% Similarity=0.036 Sum_probs=178.2
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecc-cceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEe
Q 020021 39 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 117 (332)
Q Consensus 39 ~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~ 117 (332)
++++++++.++++++.|++|.+||+.+++.+..+..+. ..+..++|+++++.++.+.. .++.|.+||+.+++.+..+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~--~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN--HYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC--CCCcEEEEeCCCCcEEEEE
Confidence 45678889999999999999999999999988886543 24678899999987766542 3789999999998887766
Q ss_pred ecc------cccEEEEEecCCCCeEEEeeCC------------CcEEEEeCCCceE---EEEEEecC-ceeEEEcCCCeE
Q 020021 118 KGH------HDRVVSLSLCSSKDCFISGSLD------------RTVLLWDQRAEKC---QGLLRVQG-RPAAAYDDQGLV 175 (332)
Q Consensus 118 ~~h------~~~V~~v~~~~~~~~l~s~s~D------------g~i~iWd~~~~~~---~~~~~~~~-~~~~~~~~~~~~ 175 (332)
..+ ...+..++|+|+++++++++.+ +.|.+||+.+++. ...+..+. .....+++++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l 161 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL 161 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCE
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcE
Confidence 532 2347789999999999999876 8999999987432 22333222 234557777774
Q ss_pred EEEEeCCEEEEEECccCCCCCeeEEEecC---------------------------------------------------
Q 020021 176 FAVAFGGYIRMFDARKYEKGPFDIFSVGG--------------------------------------------------- 204 (332)
Q Consensus 176 ~~~~~~~~i~vwd~~~~~~~~~~~~~~~~--------------------------------------------------- 204 (332)
+. .++.|.+||....+. ...+....
T Consensus 162 ~~--~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 162 YV--AGPDIYKMDVKTGKY--TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp EE--ESSSEEEECTTTCCE--EEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred EE--ccCcEEEEeCCCCce--eccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 44 345599999765321 00111000
Q ss_pred ---------------CCCCceeEEEcC-CCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEE
Q 020021 205 ---------------DISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268 (332)
Q Consensus 205 ---------------~~~~v~~v~~s~-dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~s 268 (332)
.......++++| ||++++++ ++.|++||+.+++.+..+... ..+..++|+|||++|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~ 311 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD----HTYYCVAFDKKGDKLYL 311 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS----SCCCEEEECSSSSCEEE
T ss_pred EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC----CCccceEECCCCCEEEE
Confidence 001345678889 99998888 889999999999887766532 23557999999999999
Q ss_pred EcCCCcEEEEECCCCceEEEecCC
Q 020021 269 GSGDGSVYAWSVRSGKEVASWMSF 292 (332)
Q Consensus 269 gs~Dg~i~vWd~~~~~~~~~~~~~ 292 (332)
++.++.|++||+.+++.+..+...
T Consensus 312 ~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 312 GGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp ESBSSEEEEEETTTTEEEEEEECS
T ss_pred ecCCCeEEEEeccccceeeeeecC
Confidence 999999999999999888776543
No 152
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1.7e-21 Score=180.67 Aligned_cols=206 Identities=9% Similarity=0.104 Sum_probs=151.5
Q ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCC----------eeeEE-----eeecccceeEEEEccCCCEEEEec-C
Q 020021 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA----------TCLKT-----INSKKYGVDLVCFTSHPTTVIYSS-K 96 (332)
Q Consensus 33 h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~----------~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~s-~ 96 (332)
+...++.+++++++.++++++.|+ ++||+.... ..+.. ...+...|..++|++++..++.+. .
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 344688999999999999999998 999875311 00110 012344689999999999888421 1
Q ss_pred CCCCceeEEEEccCC--------c---eEEEeecccccEEEEEecCC-CCeEEEeeCCCcEEEEeCCCceEEEEEEecCc
Q 020021 97 NGWDESLRLLSLHDN--------K---YLRYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR 164 (332)
Q Consensus 97 ~g~d~~v~v~d~~~~--------~---~~~~~~~h~~~V~~v~~~~~-~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~ 164 (332)
++.|++|++||+.++ + .+..+.+|...|.+++|+|+ +++|++++.||+|++||++++......
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~----- 188 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT----- 188 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE-----
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec-----
Confidence 345899999998764 1 25667789999999999997 789999999999999999876332110
Q ss_pred eeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEe
Q 020021 165 PAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~ 244 (332)
.++...+.+++|+|+|+++++++.||.|++||.+ ++....+
T Consensus 189 --------------------------------------~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~ 229 (434)
T 2oit_A 189 --------------------------------------LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVI 229 (434)
T ss_dssp --------------------------------------ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEE
T ss_pred --------------------------------------cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccccccc
Confidence 0123467889999999999999999999999988 5555544
Q ss_pred eecCC----CCCcceEEEECCCCCEEEEE-cCCC------cEEEEECCCC
Q 020021 245 NVKPV----SRNSTLEASFSPEGMFVISG-SGDG------SVYAWSVRSG 283 (332)
Q Consensus 245 ~~~~~----~~~~~~~v~~spdg~~l~sg-s~Dg------~i~vWd~~~~ 283 (332)
..+.. +...+.+++|++++.++++. +.|| .+++|++.+.
T Consensus 230 ~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 230 PCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 43221 12367889999999888654 3443 3999999764
No 153
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.88 E-value=1.3e-20 Score=171.09 Aligned_cols=291 Identities=11% Similarity=0.091 Sum_probs=193.4
Q ss_pred ccceeEeccCCCcEEE-----EEECCCCCEEEEEeC-CCc--EEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEec
Q 020021 24 MEVGMSFRDYNGRISS-----MDFHKSSSYLVTASD-DES--IRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS 95 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~-----i~~s~dg~~l~tgs~-D~t--v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 95 (332)
......|..|.+.... .+|||||++|+.++. |++ |.+||+.+++..+....+...+...+|+|+++.+++++
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~ 99 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK 99 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEe
Confidence 3445667778777766 889999999999887 664 88889999988776666555554568999999999886
Q ss_pred CCCCCceeEEEEccCCceEEEeecccccEEEEE--ecCCCCeEEE----------------------eeCCCcEEEEeCC
Q 020021 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLS--LCSSKDCFIS----------------------GSLDRTVLLWDQR 151 (332)
Q Consensus 96 ~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~--~~~~~~~l~s----------------------~s~Dg~i~iWd~~ 151 (332)
. +..+++||+.+++....+..+...+.... ++++++.++. .+.+..|.+||+.
T Consensus 100 ~---~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 100 D---GRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp T---TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred C---CCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 4 56899999999988777777766664444 4889988874 3355789999999
Q ss_pred CceEEEEEEecC-ceeEEEcC-CCeEEEEEe-C------CEEEEEECccCCCCCeeEEEecCCC--CCceeEEEcCCCCE
Q 020021 152 AEKCQGLLRVQG-RPAAAYDD-QGLVFAVAF-G------GYIRMFDARKYEKGPFDIFSVGGDI--SDANVVKFSNDGRL 220 (332)
Q Consensus 152 ~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~-~------~~i~vwd~~~~~~~~~~~~~~~~~~--~~v~~v~~s~dg~~ 220 (332)
+++......... .....+++ ++..++... + ..|.++|...... . .+.... ..+...+|||||+.
T Consensus 177 ~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~--~l~~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 177 TGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM---R--KVKTHAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp TCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC---E--ESCCCCTTEEEEEEEECTTSSC
T ss_pred CCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce---E--EeeeCCCCcccccceECCCCCE
Confidence 887655443332 23456778 776554333 2 2677777643221 1 111111 13556789999997
Q ss_pred EEEEcC-CC----eEEEEEccCCeEeEEeeecCC-CC-CcceEEEECCCCCEEEEE---------cCCCcEEEEECCCCc
Q 020021 221 MLLTTM-EG----HIHVLDSFRGTLLSTYNVKPV-SR-NSTLEASFSPEGMFVISG---------SGDGSVYAWSVRSGK 284 (332)
Q Consensus 221 l~~~~~-dg----~i~i~d~~~~~~~~~~~~~~~-~~-~~~~~v~~spdg~~l~sg---------s~Dg~i~vWd~~~~~ 284 (332)
|+..+. ++ .|++||+.+++.......... +. ......+|+|||++|+.. ..+..|++||+.+++
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 252 LVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred EEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 755433 22 399999998875332221110 00 001123799999988854 456689999998765
Q ss_pred eEEEecCCCC-----------CCceEEeCCCeeEEEeccc---eEEEeccccc
Q 020021 285 EVASWMSFDT-----------EPPVIKWTPGSLMFVTGSS---ELSFWIPDLS 323 (332)
Q Consensus 285 ~~~~~~~~~~-----------~v~~l~~sp~~~~l~t~~~---d~~~w~~~~~ 323 (332)
. ..+..+.. .+..++|+|||+.|+..+. ...+|..++.
T Consensus 332 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 332 Q-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp E-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred e-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 4 45555555 5788999999987776543 3777776553
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=1.8e-20 Score=162.72 Aligned_cols=238 Identities=10% Similarity=0.051 Sum_probs=166.6
Q ss_pred eEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCC-CeeeEEeeecc-cceeEEEEccCCCEEEEecCCCCCceeEE
Q 020021 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (332)
Q Consensus 28 ~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~-~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~s~~g~d~~v~v 105 (332)
..+..|.+.|.+++|+|+|++|++++ |+.|++||+.+ ++.......+. ..+..++|+|+++.++++... .++..++
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~l 112 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKV-EFGKSAI 112 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECT-TTSSCEE
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeC-CCCcceE
Confidence 35677899999999999999999887 88999999998 87776665553 567789999999999887632 1345556
Q ss_pred EEc--cCCceEEEeecccccEEEEEecCCCCeEE-EeeCCCcEEEEeC--CCceEEEEEEec-CceeEEEcCCCeEEE-E
Q 020021 106 LSL--HDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLLWDQ--RAEKCQGLLRVQ-GRPAAAYDDQGLVFA-V 178 (332)
Q Consensus 106 ~d~--~~~~~~~~~~~h~~~V~~v~~~~~~~~l~-s~s~Dg~i~iWd~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~ 178 (332)
|.+ .+++ ...+..+. .+..++|+|+++.|+ +++.|+.+++|++ .++......... ......+++++..++ +
T Consensus 113 ~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 190 (297)
T 2ojh_A 113 YLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFN 190 (297)
T ss_dssp EEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEE
Confidence 554 4444 34444443 488999999999877 7889999999985 334332222111 223466777776544 4
Q ss_pred E-eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCC-----------CeEEEEEccCCeEeEEeee
Q 020021 179 A-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----------GHIHVLDSFRGTLLSTYNV 246 (332)
Q Consensus 179 ~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~ 246 (332)
+ .++.+++|++..... . ...+..+...+..++|+|||+++++++.+ +.|++||+.+++.......
T Consensus 191 ~~~~~~~~i~~~~~~~~-~--~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 267 (297)
T 2ojh_A 191 SSRTGQMQIWRVRVDGS-S--VERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDL 267 (297)
T ss_dssp ECTTSSCEEEEEETTSS-C--EEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEE
T ss_pred ecCCCCccEEEECCCCC-C--cEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeecc
Confidence 4 378899998753221 1 12233334467789999999999888765 5699999988765433321
Q ss_pred cCCCCCcceEEEECCCCCEEEEEcCCC
Q 020021 247 KPVSRNSTLEASFSPEGMFVISGSGDG 273 (332)
Q Consensus 247 ~~~~~~~~~~v~~spdg~~l~sgs~Dg 273 (332)
. .+...+..++|+|||++|++++.|.
T Consensus 268 ~-~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 268 F-GGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp E-ESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred C-CCCcccccceECCCCCEEEEEEecc
Confidence 1 2345567789999999999987764
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=9.3e-20 Score=164.99 Aligned_cols=254 Identities=9% Similarity=0.058 Sum_probs=169.3
Q ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEEcC-CCeeeEEeeec-ccceeEEEEccCCCEE-EEecC------CC-----
Q 020021 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVT-AATCLKTINSK-KYGVDLVCFTSHPTTV-IYSSK------NG----- 98 (332)
Q Consensus 33 h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~~-~~~s~------~g----- 98 (332)
....+..++|+|||++|++++.+ +|.+||+. +++........ ......++++|+++.+ ++.+. .+
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 44567889999999999999998 99999997 78765433211 1124457889999863 33321 01
Q ss_pred CCceeEEEEcc-CCceEEEee----cccccEEEEEecCCCCeEEEeeC-CCcEEEEeCC-CceEEEEEEecCceeEEEcC
Q 020021 99 WDESLRLLSLH-DNKYLRYFK----GHHDRVVSLSLCSSKDCFISGSL-DRTVLLWDQR-AEKCQGLLRVQGRPAAAYDD 171 (332)
Q Consensus 99 ~d~~v~v~d~~-~~~~~~~~~----~h~~~V~~v~~~~~~~~l~s~s~-Dg~i~iWd~~-~~~~~~~~~~~~~~~~~~~~ 171 (332)
.++++.+|++. .++....+. .+...+.+++|+|+|++++++.. ++.|++||+. +++.......
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~---------- 186 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSV---------- 186 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEE----------
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeE----------
Confidence 47889999997 465544443 25567999999999998877654 6799999987 5543211000
Q ss_pred CCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEc-CCCeEEEEEcc--CCeEeE---Eee
Q 020021 172 QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSF--RGTLLS---TYN 245 (332)
Q Consensus 172 ~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~-~dg~i~i~d~~--~~~~~~---~~~ 245 (332)
....+......++|||||+++++++ .++.|.+|+.. ++++.. .+.
T Consensus 187 -----------------------------~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 237 (365)
T 1jof_A 187 -----------------------------DAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP 237 (365)
T ss_dssp -----------------------------ECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE
T ss_pred -----------------------------ecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE
Confidence 0000012356789999999887665 57899999765 565432 222
Q ss_pred ecCCC----CC------cceEEE-ECCCCCEEEEEcCCC------cEEEEECC-CCceEE---EecCCCCCCceEEeCC-
Q 020021 246 VKPVS----RN------STLEAS-FSPEGMFVISGSGDG------SVYAWSVR-SGKEVA---SWMSFDTEPPVIKWTP- 303 (332)
Q Consensus 246 ~~~~~----~~------~~~~v~-~spdg~~l~sgs~Dg------~i~vWd~~-~~~~~~---~~~~~~~~v~~l~~sp- 303 (332)
..+.. .. .+..++ |||||++|++++.+. +|.+|++. +++... ....+...+..++|+|
T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~ 317 (365)
T 1jof_A 238 LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPC 317 (365)
T ss_dssp SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEEC
T ss_pred cCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCC
Confidence 11111 11 466899 999999988775433 89999996 565432 1333555678899999
Q ss_pred --CeeEEEeccc---eEEEecccccccc
Q 020021 304 --GSLMFVTGSS---ELSFWIPDLSKLG 326 (332)
Q Consensus 304 --~~~~l~t~~~---d~~~w~~~~~~~~ 326 (332)
|+++|+++.. .+.+|+++...|.
T Consensus 318 ~~dg~~l~v~~~~~~~v~v~~~~~~~l~ 345 (365)
T 1jof_A 318 PWSDEWMAITDDQEGWLEIYRWKDEFLH 345 (365)
T ss_dssp TTCTTEEEEECSSSCEEEEEEEETTEEE
T ss_pred CcCCCEEEEEEcCCCeEEEEEEchhhCc
Confidence 7888777653 4899988776553
No 156
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=7.6e-19 Score=157.07 Aligned_cols=239 Identities=11% Similarity=0.151 Sum_probs=175.2
Q ss_pred cceeEEEEccCCCEEEEecCCCC----CceeEEEEccCCceEEEeecccccEEEEEecCCCCe-EEEeeCCCcEEEEeCC
Q 020021 77 YGVDLVCFTSHPTTVIYSSKNGW----DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDC-FISGSLDRTVLLWDQR 151 (332)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~s~~g~----d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~-l~s~s~Dg~i~iWd~~ 151 (332)
..+..++++++++.+++++..+. ++.|.+||..+++.+..+... ..+..+.|+|++++ +++...++.|.+||.+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 34677899999999888775543 678999999999888777643 44778999999984 5566678999999999
Q ss_pred CceEEEEEEecC-----------ceeEEEcCCCe-EEEEEe--CCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCC
Q 020021 152 AEKCQGLLRVQG-----------RPAAAYDDQGL-VFAVAF--GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND 217 (332)
Q Consensus 152 ~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~~~--~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 217 (332)
+++....+.... .....+++++. ++.+.. ++.|.+||....+. ..........+..++|+||
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL----KTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE----EEEECCCCTTCCCCEEETT
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce----EEEecCCCCccceEEECCC
Confidence 988877665532 13356777665 444442 68899999875321 1122212234678899999
Q ss_pred CCEEEEEcCCCeEEEEEccCCeEeEEeeecCC-CCCcceEEEECCCCCEEEEEcC-CCcEEEEECCCCceEEEecCCCCC
Q 020021 218 GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV-SRNSTLEASFSPEGMFVISGSG-DGSVYAWSVRSGKEVASWMSFDTE 295 (332)
Q Consensus 218 g~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~~v~~spdg~~l~sgs~-Dg~i~vWd~~~~~~~~~~~~~~~~ 295 (332)
|+.+++++.++.|.+||..+++.+..+..... +...+..++|+|||++++.++. ++.|++||+.+++.+..+....
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-- 273 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-- 273 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--
Confidence 99999999999999999999998877654221 3345567899999998777755 4899999999998877765433
Q ss_pred CceEEeCCCee-EEEeccc--eEEEecccc
Q 020021 296 PPVIKWTPGSL-MFVTGSS--ELSFWIPDL 322 (332)
Q Consensus 296 v~~l~~sp~~~-~l~t~~~--d~~~w~~~~ 322 (332)
...++|+|+++ ++++... .+.+|+...
T Consensus 274 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 274 SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 36799999997 4455433 377787653
No 157
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.86 E-value=1e-18 Score=158.16 Aligned_cols=273 Identities=12% Similarity=0.084 Sum_probs=190.5
Q ss_pred cccceeEeccCCCcEEEEEECCCCCEEEEEe----------CCCcEEEEEcCCCeeeEEeeec------ccceeEEEEcc
Q 020021 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSK------KYGVDLVCFTS 86 (332)
Q Consensus 23 ~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs----------~D~tv~iwd~~~~~~~~~~~~~------~~~v~~~~~~~ 86 (332)
..++...+..+..+ .+.|+|||+++..++ .|++|.+||+.+++.+.++... ......++++|
T Consensus 40 t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp 117 (361)
T 2oiz_A 40 NGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT 117 (361)
T ss_dssp TCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT
T ss_pred CCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC
Confidence 44556677777666 899999999998876 3678999999999998887643 12355689999
Q ss_pred CCCEEEEecCCCCCceeEEEEccCCceEEE-eecccccEEEEEecCCC-CeEEEeeCCCcEEEEeCCC-ceEEEEEEe--
Q 020021 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLRY-FKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQRA-EKCQGLLRV-- 161 (332)
Q Consensus 87 ~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~-~~~h~~~V~~v~~~~~~-~~l~s~s~Dg~i~iWd~~~-~~~~~~~~~-- 161 (332)
+++.++.+.. +.+++|.+||+.+++.+.. +.. .. ...+.+.|++ ..+++.+.||.+.+|+... ++.......
T Consensus 118 dg~~l~v~n~-~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~ 194 (361)
T 2oiz_A 118 DGKFIVLQNA-SPATSIGIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQ 194 (361)
T ss_dssp TSSEEEEEEE-SSSEEEEEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCC
T ss_pred CCCEEEEECC-CCCCeEEEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccc
Confidence 9999888753 2257899999999988776 442 22 2335566765 6888999999999999865 444322110
Q ss_pred ----cCce-eEEEcC-CCeEEEEEeCCEEEEEECccCCCCCeeEEEecC--------CCCCceeEEEcCCCCEEEEEcC-
Q 020021 162 ----QGRP-AAAYDD-QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG--------DISDANVVKFSNDGRLMLLTTM- 226 (332)
Q Consensus 162 ----~~~~-~~~~~~-~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~--------~~~~v~~v~~s~dg~~l~~~~~- 226 (332)
...+ .....+ ...++....++.+.++|+..........+.... .......++|+||++.+.+...
T Consensus 195 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~ 274 (361)
T 2oiz_A 195 MFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHP 274 (361)
T ss_dssp CSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEES
T ss_pred eEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEcc
Confidence 0001 001111 234444556788999998643211111111100 0112234789999876665432
Q ss_pred ----------CCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCC--ceEEEecCCCC
Q 020021 227 ----------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG--KEVASWMSFDT 294 (332)
Q Consensus 227 ----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~--~~~~~~~~~~~ 294 (332)
.+.|.+||..+++.+.++.. +. ...++|+|||++|++++. ++|.+||..++ +.+..+..+..
T Consensus 275 ~~~~~~~~~~~~~v~viD~~t~~~v~~i~~---~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~ 348 (361)
T 2oiz_A 275 DGKEGTHKFPAAEIWVMDTKTKQRVARIPG---RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAE 348 (361)
T ss_dssp SCCTTCTTCCCSEEEEEETTTTEEEEEEEC---TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCS
T ss_pred CCCcccccCCCceEEEEECCCCcEEEEEec---CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCC
Confidence 35899999999999888764 22 778999999999999987 99999999999 88888777777
Q ss_pred CCceEEeCCCee
Q 020021 295 EPPVIKWTPGSL 306 (332)
Q Consensus 295 ~v~~l~~sp~~~ 306 (332)
.+..++++|+|+
T Consensus 349 ~P~~~~~~p~G~ 360 (361)
T 2oiz_A 349 ASLQVQFHPVGG 360 (361)
T ss_dssp SEEEEEECCCSC
T ss_pred CcEEEEecCCCC
Confidence 889999999985
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=4.6e-20 Score=181.31 Aligned_cols=277 Identities=12% Similarity=0.088 Sum_probs=182.3
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeeccc---ceeEEEEccCCCEEEEecCC------CCCceeEEEEcc
Q 020021 39 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY---GVDLVCFTSHPTTVIYSSKN------GWDESLRLLSLH 109 (332)
Q Consensus 39 ~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~s~~------g~d~~v~v~d~~ 109 (332)
+++|+|||.++++ +.|++|++||+.++++...+..+.. .+..++|+|+++.+++++.. +.++.+++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6789999965554 5699999999999998877766544 48899999999999887631 125789999999
Q ss_pred CCceE--EEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--------------------ceeE
Q 020021 110 DNKYL--RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--------------------RPAA 167 (332)
Q Consensus 110 ~~~~~--~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--------------------~~~~ 167 (332)
+++.+ ..+ ...+..++|+|||+.|++++ |++|++||+.++++........ ....
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 88752 122 35688899999999999885 7899999998876543221110 0256
Q ss_pred EEcCCCeEEEEE-eCC----------------------------------EEEEEECccCCCC-CeeEE---EecCCCCC
Q 020021 168 AYDDQGLVFAVA-FGG----------------------------------YIRMFDARKYEKG-PFDIF---SVGGDISD 208 (332)
Q Consensus 168 ~~~~~~~~~~~~-~~~----------------------------------~i~vwd~~~~~~~-~~~~~---~~~~~~~~ 208 (332)
.++|++..++.+ .+. .|++||+...+.. ...+. .+.++...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 788888655544 331 7888987643210 00000 01123345
Q ss_pred ceeEEEcCCCCEEEEEcCC----CeEEEEE----ccCCeEeEEee-ecCCCCCcce-----EEEECCCCCEEEE--EcCC
Q 020021 209 ANVVKFSNDGRLMLLTTME----GHIHVLD----SFRGTLLSTYN-VKPVSRNSTL-----EASFSPEGMFVIS--GSGD 272 (332)
Q Consensus 209 v~~v~~s~dg~~l~~~~~d----g~i~i~d----~~~~~~~~~~~-~~~~~~~~~~-----~v~~spdg~~l~s--gs~D 272 (332)
+..++||||++++++.... ..|.+|| ..+++...... ....+...+. .++|||||+.|+. ...+
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 334 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD 334 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC
Confidence 6889999999877764433 2488899 77776543331 0012233333 6789999996554 4455
Q ss_pred C--cEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEE-eccc------eEEEecccc
Q 020021 273 G--SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFV-TGSS------ELSFWIPDL 322 (332)
Q Consensus 273 g--~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~-t~~~------d~~~w~~~~ 322 (332)
| .|++||+.+++ ...+..+...+..+.++ +++.++ ++.. ..++|..+.
T Consensus 335 g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 335 GYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 5 57777877665 45555555556666666 665444 4332 388887754
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=6.9e-18 Score=150.45 Aligned_cols=228 Identities=10% Similarity=0.065 Sum_probs=159.5
Q ss_pred EEccCCCEEEEecCCCCCceeEEEEccCCceEEEeeccc-ccEEEEEecCCCCeE-EEeeCCCcEEEEeCCCceEEEEEE
Q 020021 83 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH-DRVVSLSLCSSKDCF-ISGSLDRTVLLWDQRAEKCQGLLR 160 (332)
Q Consensus 83 ~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~-~~V~~v~~~~~~~~l-~s~s~Dg~i~iWd~~~~~~~~~~~ 160 (332)
++.+++..+++++. +++|.+||+.+++.+..+..+. ..+..++|+|+++++ ++...++.|.+||+.+++....+.
T Consensus 6 ~~~~~~~~~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 6 ALKAGHEYMIVTNY---PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCTTCEEEEEEET---TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccCCCEEEEEeCC---CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 45555555555543 7899999999998888776543 256789999999855 566678999999999888776665
Q ss_pred ecC--------ceeEEEcCCCeEEEEEe-------------CCEEEEEECccCCC-CCeeEEEecCCCCCceeEEEcCCC
Q 020021 161 VQG--------RPAAAYDDQGLVFAVAF-------------GGYIRMFDARKYEK-GPFDIFSVGGDISDANVVKFSNDG 218 (332)
Q Consensus 161 ~~~--------~~~~~~~~~~~~~~~~~-------------~~~i~vwd~~~~~~-~~~~~~~~~~~~~~v~~v~~s~dg 218 (332)
... .....+++++..+.++. ++.|.+||+...+. ....... ....+..++|+|||
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP---MPRQVYLMRAADDG 159 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE---CCSSCCCEEECTTS
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc---CCCcccceeECCCC
Confidence 432 23567778776555443 48999999875321 1122222 12357788999999
Q ss_pred CEEEEEcCCCeEEEEEccCCeEeEEeeecCC-------------------------------------------------
Q 020021 219 RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV------------------------------------------------- 249 (332)
Q Consensus 219 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------------------------------------------------- 249 (332)
+ +++++ +.|++||..+++.+..+.....
T Consensus 160 ~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 160 S-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp C-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred c-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 9 55543 3499999998887765542210
Q ss_pred ----------------CCCcceEEEECC-CCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEecc
Q 020021 250 ----------------SRNSTLEASFSP-EGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS 312 (332)
Q Consensus 250 ----------------~~~~~~~v~~sp-dg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~ 312 (332)
....+..++|+| ||++++++ ++.|++||+.+++.+..+.. ...+..++|+|++++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEES
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEec
Confidence 001234567889 99999988 88999999999887776653 34578999999997766655
Q ss_pred ce--EEEecccc
Q 020021 313 SE--LSFWIPDL 322 (332)
Q Consensus 313 ~d--~~~w~~~~ 322 (332)
.+ +.+|+++.
T Consensus 314 ~~~~v~v~d~~~ 325 (349)
T 1jmx_B 314 TFNDLAVFNPDT 325 (349)
T ss_dssp BSSEEEEEETTT
T ss_pred CCCeEEEEeccc
Confidence 43 88888754
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=2.4e-19 Score=177.03 Aligned_cols=276 Identities=8% Similarity=0.084 Sum_probs=182.8
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccc---e--eEEEEccCCCEEEEecCC------CCCceeE
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYG---V--DLVCFTSHPTTVIYSSKN------GWDESLR 104 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~---v--~~~~~~~~~~~~~~~s~~------g~d~~v~ 104 (332)
...++.|+|||.+++++ |++|++||+.++++...+..+... + ..+.|+|+++.+++++.. ...+.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45688999999999886 999999999999988777776533 2 237889999999887631 0114667
Q ss_pred EEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec-------C-------------c
Q 020021 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-------G-------------R 164 (332)
Q Consensus 105 v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~-------~-------------~ 164 (332)
+||+++++.. .+..|...+...+|||||+.||.+ .|+.|.+||..++......... + .
T Consensus 96 ~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 96 IYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 9999998754 477788899999999999999988 4789999999877644321100 0 0
Q ss_pred eeEEEcCCCeEEE-EEeC-CEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccC---Ce
Q 020021 165 PAAAYDDQGLVFA-VAFG-GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR---GT 239 (332)
Q Consensus 165 ~~~~~~~~~~~~~-~~~~-~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~---~~ 239 (332)
....++|++..++ ...| ..+++|++....... .+......+.++++|.. .....|++||+.+ ++
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~-------~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~ 242 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES-------LQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVT 242 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT-------CSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSS
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCC-------CCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCC
Confidence 1256788886544 3333 457888764332210 12234456677777753 2223789999988 73
Q ss_pred E--eEEeeecC---CCCCcceEEEECCCCCEEEEEc----CCCcEEEEECCCCc----eE--EEe--cCCCCCCc-----
Q 020021 240 L--LSTYNVKP---VSRNSTLEASFSPEGMFVISGS----GDGSVYAWSVRSGK----EV--ASW--MSFDTEPP----- 297 (332)
Q Consensus 240 ~--~~~~~~~~---~~~~~~~~v~~spdg~~l~sgs----~Dg~i~vWd~~~~~----~~--~~~--~~~~~~v~----- 297 (332)
. ...+.... .+...+..++|||||+.++... .+..|++||+.+++ +. ..+ ..|...+.
T Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~ 322 (740)
T 4a5s_A 243 NATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPS 322 (740)
T ss_dssp CCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCC
T ss_pred cceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCC
Confidence 1 11222100 1445677899999999766653 33479999998887 21 112 34555554
Q ss_pred eEEeCCCeeEEE-eccc-----eEEEecccccccc
Q 020021 298 VIKWTPGSLMFV-TGSS-----ELSFWIPDLSKLG 326 (332)
Q Consensus 298 ~l~~sp~~~~l~-t~~~-----d~~~w~~~~~~~~ 326 (332)
.++|+|||+.++ ..+. .+.+|+.+.....
T Consensus 323 ~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~ 357 (740)
T 4a5s_A 323 EPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT 357 (740)
T ss_dssp CCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE
T ss_pred CceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE
Confidence 789999998776 4442 2555555554433
No 161
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.82 E-value=1.1e-18 Score=158.39 Aligned_cols=280 Identities=10% Similarity=0.028 Sum_probs=180.1
Q ss_pred eeEeccCCCc-----EEEEEECCCCCEEEEEeCC---CcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCC
Q 020021 27 GMSFRDYNGR-----ISSMDFHKSSSYLVTASDD---ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG 98 (332)
Q Consensus 27 ~~~l~~h~~~-----I~~i~~s~dg~~l~tgs~D---~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g 98 (332)
...|..+... +..++|||||++|+....+ ..|.+||+.+++.......+........|+|+++.+++.+.
T Consensus 23 ~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~-- 100 (396)
T 3c5m_A 23 VTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN-- 100 (396)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET--
T ss_pred eEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc--
Confidence 3445544433 6778999999998776543 46888899988765443333222333689999999988764
Q ss_pred CCceeEEEEccCCceEEEeecccccEEE-------------------EEecCCCCeEEEe-----eCCCcEEEEeCCCce
Q 020021 99 WDESLRLLSLHDNKYLRYFKGHHDRVVS-------------------LSLCSSKDCFISG-----SLDRTVLLWDQRAEK 154 (332)
Q Consensus 99 ~d~~v~v~d~~~~~~~~~~~~h~~~V~~-------------------v~~~~~~~~l~s~-----s~Dg~i~iWd~~~~~ 154 (332)
+..+.+||+.+++.......+...... +.++|+++.++.. ..+..|.+||+.+++
T Consensus 101 -~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 101 -ELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp -TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred -CCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 458999999988876666655443322 3567777766654 466789999998877
Q ss_pred EEEEEEecC-ceeEEEcC-CCe-EEEEEeC------CEEEEEECccCCCCCeeEEEecCC--CCCceeEEEcCCCCEEEE
Q 020021 155 CQGLLRVQG-RPAAAYDD-QGL-VFAVAFG------GYIRMFDARKYEKGPFDIFSVGGD--ISDANVVKFSNDGRLMLL 223 (332)
Q Consensus 155 ~~~~~~~~~-~~~~~~~~-~~~-~~~~~~~------~~i~vwd~~~~~~~~~~~~~~~~~--~~~v~~v~~s~dg~~l~~ 223 (332)
......... .....+++ ++. ++.++.+ ..|.+||+.... .. .+..+ ...+..++|||||+.++.
T Consensus 180 ~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~--~l~~~~~~~~~~~~~~spdg~~l~~ 254 (396)
T 3c5m_A 180 LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---VR--KIKEHAEGESCTHEFWIPDGSAMAY 254 (396)
T ss_dssp EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC---CE--ESSCCCTTEEEEEEEECTTSSCEEE
T ss_pred EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc---ee--EeeccCCCccccceEECCCCCEEEE
Confidence 655443322 23445666 454 4444432 357778865322 11 11111 123567899999998776
Q ss_pred EcCC-----CeEEEEEccCCeEeEEeeecCCCCCcceEEEECC-CCCEEEEEc----------------CCCcEEEEECC
Q 020021 224 TTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP-EGMFVISGS----------------GDGSVYAWSVR 281 (332)
Q Consensus 224 ~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~sp-dg~~l~sgs----------------~Dg~i~vWd~~ 281 (332)
.+.+ +.|++||+.+++........ . .. .+|+| ||++++.++ .+..|++||+.
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~~~l~~~~----~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 255 VSYFKGQTDRVIYKANPETLENEEVMVMP----P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp EEEETTTCCEEEEEECTTTCCEEEEEECC----S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred EecCCCCccceEEEEECCCCCeEEeeeCC----C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 6543 44999999888654322211 1 12 78999 999998765 34789999998
Q ss_pred CCceEEEecCCCC-----------CCceEEeCCCeeEEEeccc---eEEEeccc
Q 020021 282 SGKEVASWMSFDT-----------EPPVIKWTPGSLMFVTGSS---ELSFWIPD 321 (332)
Q Consensus 282 ~~~~~~~~~~~~~-----------~v~~l~~sp~~~~l~t~~~---d~~~w~~~ 321 (332)
+++. ..+..+.. .+..++|+||++.++.++. ...+|..+
T Consensus 329 ~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 329 AKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 7764 33444443 2567899999987776553 25666544
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.82 E-value=1.2e-18 Score=171.25 Aligned_cols=284 Identities=9% Similarity=0.080 Sum_probs=182.7
Q ss_pred ceeEeccCCC---cEEEEEECCCCCEEEEEeC---------CCcEEEEEcCCCeee--EEeeecccceeEEEEccCCCEE
Q 020021 26 VGMSFRDYNG---RISSMDFHKSSSYLVTASD---------DESIRLYDVTAATCL--KTINSKKYGVDLVCFTSHPTTV 91 (332)
Q Consensus 26 ~~~~l~~h~~---~I~~i~~s~dg~~l~tgs~---------D~tv~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~ 91 (332)
....+.+|.. .|.+++|||||++|+.++. |++|++||+.+++.+ ..+. ..+..++|+|+++.+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~~SPDG~~l 124 (719)
T 1z68_A 48 SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---RPIQYLCWSPVGSKL 124 (719)
T ss_dssp EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---SSBCCEEECSSTTCE
T ss_pred EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---cccccceECCCCCEE
Confidence 3344555543 3889999999999999887 799999999998873 2222 357789999999999
Q ss_pred EEecCCCCCceeEEEEccCCceEEEe-ecccccE-----------------EEEEecCCCCeEEEeeCCC----------
Q 020021 92 IYSSKNGWDESLRLLSLHDNKYLRYF-KGHHDRV-----------------VSLSLCSSKDCFISGSLDR---------- 143 (332)
Q Consensus 92 ~~~s~~g~d~~v~v~d~~~~~~~~~~-~~h~~~V-----------------~~v~~~~~~~~l~s~s~Dg---------- 143 (332)
+++. ++.|++||+.+++..... .++...| .++.|+|||++|++++.|.
T Consensus 125 a~~~----~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~ 200 (719)
T 1z68_A 125 AYVY----QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSY 200 (719)
T ss_dssp EEEE----TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEE
T ss_pred EEEE----CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeec
Confidence 8875 679999999888765433 3444433 4899999999999998763
Q ss_pred ------------------------cEEEEeCCCceEEEEEEe--------c--CceeEEEcCCCeEEEEEeC-----CEE
Q 020021 144 ------------------------TVLLWDQRAEKCQGLLRV--------Q--GRPAAAYDDQGLVFAVAFG-----GYI 184 (332)
Q Consensus 144 ------------------------~i~iWd~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~-----~~i 184 (332)
+|++||+.+++....+.. . ......+++++.++....+ ..|
T Consensus 201 ~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l 280 (719)
T 1z68_A 201 YGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVL 280 (719)
T ss_dssp CCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEE
T ss_pred cCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEE
Confidence 788999987764200111 1 1234567788776655432 258
Q ss_pred EEEE----CccCCCCCeeEEEecCCCCCce-----eEEEcCCCCEEEE--EcCCC--eEEEEEccCCeEeEEeeecCCCC
Q 020021 185 RMFD----ARKYEKGPFDIFSVGGDISDAN-----VVKFSNDGRLMLL--TTMEG--HIHVLDSFRGTLLSTYNVKPVSR 251 (332)
Q Consensus 185 ~vwd----~~~~~~~~~~~~~~~~~~~~v~-----~v~~s~dg~~l~~--~~~dg--~i~i~d~~~~~~~~~~~~~~~~~ 251 (332)
.+|| ....+...+......++...+. .+.|||||+.++. +..+| +|++||+..++. ..+. .+.
T Consensus 281 ~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~-~~lt---~~~ 356 (719)
T 1z68_A 281 SICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA-IQIT---SGK 356 (719)
T ss_dssp EEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC-EECS---CSS
T ss_pred EEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce-Eecc---cCc
Confidence 8888 5443221111000012333344 6899999996544 44555 677788766652 2222 122
Q ss_pred CcceEEEECCCCCEEEEEcCC-----CcEEEEECCC--Cc-eEEEecC----CCCCCceEEeCCCeeEEEe-ccc----e
Q 020021 252 NSTLEASFSPEGMFVISGSGD-----GSVYAWSVRS--GK-EVASWMS----FDTEPPVIKWTPGSLMFVT-GSS----E 314 (332)
Q Consensus 252 ~~~~~v~~spdg~~l~sgs~D-----g~i~vWd~~~--~~-~~~~~~~----~~~~v~~l~~sp~~~~l~t-~~~----d 314 (332)
..+..+.++ |++.|+..+.+ +..++|.+.. +. ....+.. +...+..+.|+||++.++. .+. .
T Consensus 357 ~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~ 435 (719)
T 1z68_A 357 WEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPI 435 (719)
T ss_dssp SCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCE
T ss_pred eEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCe
Confidence 345566666 77777766654 8899998754 32 1233332 5556778999999986664 332 2
Q ss_pred EEEeccc
Q 020021 315 LSFWIPD 321 (332)
Q Consensus 315 ~~~w~~~ 321 (332)
+.+|+..
T Consensus 436 ~~l~d~~ 442 (719)
T 1z68_A 436 STLHDGR 442 (719)
T ss_dssp EEEECSS
T ss_pred EEEEECC
Confidence 5666553
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=1.9e-19 Score=172.85 Aligned_cols=229 Identities=11% Similarity=0.034 Sum_probs=162.7
Q ss_pred ccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeeccc-ccEEEEEecCCCCeEEEeeC---CCcEEEEeCC
Q 020021 76 KYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH-DRVVSLSLCSSKDCFISGSL---DRTVLLWDQR 151 (332)
Q Consensus 76 ~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~-~~V~~v~~~~~~~~l~s~s~---Dg~i~iWd~~ 151 (332)
..+|..++|+++|+.+++++. .|++++||++.+++..+ +..|. ..+..+.|+|| +.+++++. +...++|.+.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~--~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGF--SEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEE--ETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEc--cCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 456899999999999998763 27799999997766544 44454 68999999999 77777765 5666776543
Q ss_pred C---ceEEEEEEecCceeEEEcC--CCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcC
Q 020021 152 A---EKCQGLLRVQGRPAAAYDD--QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM 226 (332)
Q Consensus 152 ~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~ 226 (332)
. +...............+++ ++.+++.+.++.+.+||+...+ ...... +.. ..++|||||+.+++++.
T Consensus 97 ~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~---~~~l~~--~~~--~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 97 TSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG---LRELAR--LPG--FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp TTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE---EEEEEE--ESS--CEEEEEEETTEEEEEEE
T ss_pred ccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc---EEEeec--CCC--ceEEECCCCCEEEEEEE
Confidence 2 2211111111222233444 4456666666667799986532 111111 111 78899999999998877
Q ss_pred C----CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCC--cEEEEECCCCceEEEecCCCCCCceEE
Q 020021 227 E----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG--SVYAWSVRSGKEVASWMSFDTEPPVIK 300 (332)
Q Consensus 227 d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg--~i~vWd~~~~~~~~~~~~~~~~v~~l~ 300 (332)
+ +.|++||+.+++.. .+. .+...+...+|||||++|++++.|+ .|++||+.+++.. .+..|...+..++
T Consensus 170 ~~~~~~~i~~~d~~~g~~~-~l~---~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGLR-VFD---SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYR 244 (582)
T ss_dssp EETTEEEEEEEETTTCCCE-EEC---CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHC
T ss_pred cCCCCeEEEEEcCCCCCce-Eee---cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhh
Confidence 6 78999999888764 332 3445667899999999999888899 9999999988876 6667777777777
Q ss_pred --------eCCCeeEEEeccce--EEEecc
Q 020021 301 --------WTPGSLMFVTGSSE--LSFWIP 320 (332)
Q Consensus 301 --------~sp~~~~l~t~~~d--~~~w~~ 320 (332)
|+|||.++++++.+ +++|..
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 99999887877665 788876
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=1.5e-17 Score=148.32 Aligned_cols=250 Identities=11% Similarity=0.148 Sum_probs=178.8
Q ss_pred CcEEEEEECCCCCEEEEEeCC------------------------CcEEEEEcCCCeeeEEeee-cccceeEEEEccCCC
Q 020021 35 GRISSMDFHKSSSYLVTASDD------------------------ESIRLYDVTAATCLKTINS-KKYGVDLVCFTSHPT 89 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D------------------------~tv~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 89 (332)
+.+.+|+++|+|+++++.+.+ ++|.+||..+++.+..+.. +-.....+++.+++.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 569999999999999998888 4799999999988766642 224577899999988
Q ss_pred EEEEecCCCCCceeEEEEccCCc-eEEEe---------ecccccEEEEEecC-CCCeEEEee-CCCcEEEEeCCCceEEE
Q 020021 90 TVIYSSKNGWDESLRLLSLHDNK-YLRYF---------KGHHDRVVSLSLCS-SKDCFISGS-LDRTVLLWDQRAEKCQG 157 (332)
Q Consensus 90 ~~~~~s~~g~d~~v~v~d~~~~~-~~~~~---------~~h~~~V~~v~~~~-~~~~l~s~s-~Dg~i~iWd~~~~~~~~ 157 (332)
..++.. .++.|++||..... .+..+ .++.....+++++| +++.+++.+ .++.|++||. .+....
T Consensus 104 l~v~d~---~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~ 179 (329)
T 3fvz_A 104 YWVTDV---ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVT 179 (329)
T ss_dssp EEEEET---TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEE
T ss_pred EEEEEC---CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEE
Confidence 444433 26789999986542 45555 35666789999999 788888887 6899999994 444332
Q ss_pred EEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCC-CCEEEEEcCCCeEEEEEcc
Q 020021 158 LLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-GRLMLLTTMEGHIHVLDSF 236 (332)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d-g~~l~~~~~dg~i~i~d~~ 236 (332)
.+...+. + ..... ++......++++|+ |.++++...+++|++||..
T Consensus 180 ~~~~~g~-----------------~-------~~~~~---------~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 180 QWGEESS-----------------G-------SSPRP---------GQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EECEECC-----------------S-------SSCCT---------TEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeccCCC-----------------C-------CCCCC---------cccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 2211000 0 00000 01123567999998 8888999999999999998
Q ss_pred CCeEeEEeeecCCCCCcceEEEECC------CCCEEEEEcCCCcEEEEECCCCceEEEec---CCCCCCceEEeCCCeeE
Q 020021 237 RGTLLSTYNVKPVSRNSTLEASFSP------EGMFVISGSGDGSVYAWSVRSGKEVASWM---SFDTEPPVIKWTPGSLM 307 (332)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~sp------dg~~l~sgs~Dg~i~vWd~~~~~~~~~~~---~~~~~v~~l~~sp~~~~ 307 (332)
+|+.+..+... .....+..++|+| +|+.+++.+.+..|++||+.+++.+..+. .+...+..|+++|+|.+
T Consensus 227 ~G~~~~~~~~~-~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~l 305 (329)
T 3fvz_A 227 TKEFVREIKHA-SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTV 305 (329)
T ss_dssp TCCEEEEECCT-TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEE
T ss_pred CCcEEEEEecc-ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCE
Confidence 88888776533 2335566889999 44433334445599999999999888773 45566789999999998
Q ss_pred EEeccce--EEEecccc
Q 020021 308 FVTGSSE--LSFWIPDL 322 (332)
Q Consensus 308 l~t~~~d--~~~w~~~~ 322 (332)
+++...+ +..|+++.
T Consensus 306 yvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 306 YIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEESSSCCEEEEEEEE
T ss_pred EEEECCCCEEEEEeCCc
Confidence 8887665 66666543
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=1.2e-17 Score=162.55 Aligned_cols=288 Identities=12% Similarity=0.059 Sum_probs=190.0
Q ss_pred EeccCCCcEEEEEECCCCCEEEEE--eCCCcEEEEEcCCCeeeEEeeeccccee---------EEEEc--cCCCE-EEEe
Q 020021 29 SFRDYNGRISSMDFHKSSSYLVTA--SDDESIRLYDVTAATCLKTINSKKYGVD---------LVCFT--SHPTT-VIYS 94 (332)
Q Consensus 29 ~l~~h~~~I~~i~~s~dg~~l~tg--s~D~tv~iwd~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-~~~~ 94 (332)
.+.+|...|..++|++++-++++. +.|++.+||....+...+.+..+...+. ...++ |+++. ++++
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 356789999999999887677777 6689999999654444555655554444 45455 89998 7776
Q ss_pred cCCCCCceeEEEEcc--CCceEEEeec-----ccccEEEEEecCCCCeEEEeeCC----------CcEEEEeCCC-----
Q 020021 95 SKNGWDESLRLLSLH--DNKYLRYFKG-----HHDRVVSLSLCSSKDCFISGSLD----------RTVLLWDQRA----- 152 (332)
Q Consensus 95 s~~g~d~~v~v~d~~--~~~~~~~~~~-----h~~~V~~v~~~~~~~~l~s~s~D----------g~i~iWd~~~----- 152 (332)
+.. +..|.++++. .......+.. |...+..++|+|||+.|++++.| .+|.+||+.+
T Consensus 98 ~~~--~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 98 HFG--DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp BTT--TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred ECC--CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 532 4556666665 2033455655 77889999999999999999887 5899999987
Q ss_pred -ceEEEEE-EecC-ceeEEEcCCCeEEE-EEeC--------CEEEEEECc-cCCCCCeeEEEecCCCCCceeEEEcCCCC
Q 020021 153 -EKCQGLL-RVQG-RPAAAYDDQGLVFA-VAFG--------GYIRMFDAR-KYEKGPFDIFSVGGDISDANVVKFSNDGR 219 (332)
Q Consensus 153 -~~~~~~~-~~~~-~~~~~~~~~~~~~~-~~~~--------~~i~vwd~~-~~~~~~~~~~~~~~~~~~v~~v~~s~dg~ 219 (332)
+...... .... .....+++++..++ ++.+ ..|.+||+. .........+. .++...+..+.|||||+
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-~~~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-GGPEEAIAQAEWAPDGS 254 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-EETTBCEEEEEECTTSC
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-CCCCceEcceEECCCCe
Confidence 5543322 1111 22356788886554 4434 379999986 32100111111 12235678899999999
Q ss_pred EEEEEcCCC--eEEEEEccCCeEeEEeeecCCCCC-----cceEEEECCCCCEEEEEcCCCcEEEE--ECCCCceEEEec
Q 020021 220 LMLLTTMEG--HIHVLDSFRGTLLSTYNVKPVSRN-----STLEASFSPEGMFVISGSGDGSVYAW--SVRSGKEVASWM 290 (332)
Q Consensus 220 ~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~-----~~~~v~~spdg~~l~sgs~Dg~i~vW--d~~~~~~~~~~~ 290 (332)
+++++..++ .|++||..+++............. .+..++|+|+++++++++. +.++|| |+.+++ +..+.
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~ 332 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAA 332 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECC
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEec
Confidence 888888888 677777766665432221100000 1346899999999999999 999999 555444 67777
Q ss_pred CCCCCCceE-EeCCCeeEEEeccce--EEEeccc
Q 020021 291 SFDTEPPVI-KWTPGSLMFVTGSSE--LSFWIPD 321 (332)
Q Consensus 291 ~~~~~v~~l-~~sp~~~~l~t~~~d--~~~w~~~ 321 (332)
.+...+..+ +++++...+++++.+ ..+|.++
T Consensus 333 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 333 GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 776666666 666555566655543 5566554
No 166
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.80 E-value=2.3e-18 Score=159.52 Aligned_cols=200 Identities=13% Similarity=0.076 Sum_probs=139.6
Q ss_pred cCCCcEEEEEECCCCCEEE----EEeCCCcEEEEEcCCC--------ee---eEEeeecccceeEEEEccC-CCEEEEec
Q 020021 32 DYNGRISSMDFHKSSSYLV----TASDDESIRLYDVTAA--------TC---LKTINSKKYGVDLVCFTSH-PTTVIYSS 95 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~----tgs~D~tv~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~~~~~s 95 (332)
.|.+.|.+++|+|+|++|+ +|+.|++|+|||+.++ +. +..+.+|...|..++|+|+ +..+++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4677899999999999999 8999999999998654 22 3455668889999999998 56677665
Q ss_pred CCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec---------Ccee
Q 020021 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ---------GRPA 166 (332)
Q Consensus 96 ~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~---------~~~~ 166 (332)
. |++|++||+.++..+....+|...|.+++|+|+|++|++|+.||+|++||.+ +.....+..+ ....
T Consensus 170 ~---Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 170 A---DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp T---TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEE
T ss_pred C---CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEE
Confidence 4 8899999999987777778899999999999999999999999999999998 4444333222 1123
Q ss_pred EEEcCCCeEEEEEe--CC------EEEEEECccCCCC-CeeEEEe-------cCCCCCceeEEEcCCCCEEEE-EcCCCe
Q 020021 167 AAYDDQGLVFAVAF--GG------YIRMFDARKYEKG-PFDIFSV-------GGDISDANVVKFSNDGRLMLL-TTMEGH 229 (332)
Q Consensus 167 ~~~~~~~~~~~~~~--~~------~i~vwd~~~~~~~-~~~~~~~-------~~~~~~v~~v~~s~dg~~l~~-~~~dg~ 229 (332)
..+.++..++++.. +| .+++|+++..... +...... .+.......+..-+|.+++++ ++....
T Consensus 246 v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~d 325 (434)
T 2oit_A 246 VLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTE 325 (434)
T ss_dssp EEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSB
T ss_pred EEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCc
Confidence 45555665554332 32 4899999864321 2221111 112222223333366665554 455566
Q ss_pred EEEEEc
Q 020021 230 IHVLDS 235 (332)
Q Consensus 230 i~i~d~ 235 (332)
|.++..
T Consensus 326 v~vl~~ 331 (434)
T 2oit_A 326 VSILAR 331 (434)
T ss_dssp CEEEEE
T ss_pred eeEEEe
Confidence 777764
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=2.8e-16 Score=136.78 Aligned_cols=242 Identities=9% Similarity=0.136 Sum_probs=172.4
Q ss_pred cCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeee------cccceeEEEEc-cCCCEEEEecCCCCCceeE
Q 020021 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS------KKYGVDLVCFT-SHPTTVIYSSKNGWDESLR 104 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~------~~~~v~~~~~~-~~~~~~~~~s~~g~d~~v~ 104 (332)
+|-..+.+|+++++|+++++...++.|.+||.. ++.+..+.. +...+..+++. +++ .++.+.. +.++.|+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~-~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTER-SPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEEC-GGGCEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCC-eEEEEcC-CCCCEEE
Confidence 455678999999999999999999999999987 566655532 22346778884 444 4444431 1257899
Q ss_pred EEEccCCceEEEee-cccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCE
Q 020021 105 LLSLHDNKYLRYFK-GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGY 183 (332)
Q Consensus 105 v~d~~~~~~~~~~~-~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (332)
+|| .+++.+..+. .+...+.++++.++++.+++...++.|.+||... +....+..
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~---------------------- 159 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGC---------------------- 159 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEEC----------------------
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEEEEeCC----------------------
Confidence 999 5666666664 3456789999999999888888889999998643 22111100
Q ss_pred EEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCC
Q 020021 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 263 (332)
Q Consensus 184 i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg 263 (332)
.........++++|+|+++++...++.|++||. .++.+..+... .....+..++++|+|
T Consensus 160 -------------------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-g~~~~p~~i~~d~~G 218 (286)
T 1q7f_A 160 -------------------SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGE-GITNYPIGVGINSNG 218 (286)
T ss_dssp -------------------TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCT-TTSCSEEEEEECTTC
T ss_pred -------------------CCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccC-CccCCCcEEEECCCC
Confidence 011123567899999999888888999999997 45555554321 122456789999999
Q ss_pred CEEEEEcCCC-cEEEEECCCCceEEEecCCCC--CCceEEeCCCeeEEEeccc-eEEEecccc
Q 020021 264 MFVISGSGDG-SVYAWSVRSGKEVASWMSFDT--EPPVIKWTPGSLMFVTGSS-ELSFWIPDL 322 (332)
Q Consensus 264 ~~l~sgs~Dg-~i~vWd~~~~~~~~~~~~~~~--~v~~l~~sp~~~~l~t~~~-d~~~w~~~~ 322 (332)
+++++...++ .|++||. +++.+..+..+.. .+..++++|+++++++... .+++|.+..
T Consensus 219 ~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 219 EILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp CEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 9999988886 9999995 5677776655443 3568999999998888432 388887643
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.80 E-value=5.8e-17 Score=146.57 Aligned_cols=273 Identities=6% Similarity=0.004 Sum_probs=184.1
Q ss_pred CCCCEEEEEe------CCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecC-------CCCCceeEEEEccC
Q 020021 44 KSSSYLVTAS------DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK-------NGWDESLRLLSLHD 110 (332)
Q Consensus 44 ~dg~~l~tgs------~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~-------~g~d~~v~v~d~~~ 110 (332)
++++++.... .|++|.+||..+++.+.++..+..+ .++|+|+++.++.+.. +..+++|.+||..+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 3555554432 4789999999999998888766544 7899999999888752 11367899999999
Q ss_pred CceEEEeecc------cccEEEEEecCCCCeEEEeeC--CCcEEEEeCCCceEEEE-EEecCceeEEEcCC--CeEEEEE
Q 020021 111 NKYLRYFKGH------HDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGL-LRVQGRPAAAYDDQ--GLVFAVA 179 (332)
Q Consensus 111 ~~~~~~~~~h------~~~V~~v~~~~~~~~l~s~s~--Dg~i~iWd~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ 179 (332)
.+.+..+..+ ......++++|||++|+.+.. +++|.+||.++++.... +...........+. ..+++.+
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEEC
Confidence 8887776532 234567899999999988864 68999999999887665 43333222223333 3566666
Q ss_pred eCCEEEEEECccCCCCCee-EEE----ecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCe--EeEEeeecC----
Q 020021 180 FGGYIRMFDARKYEKGPFD-IFS----VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNVKP---- 248 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~~~-~~~----~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~---- 248 (332)
.||.+.+|+..... ... ... .... .....+.+++++..++..+.++.++++|..... ....+....
T Consensus 171 ~dg~~~~v~~~~~g--~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 2oiz_A 171 GDGGLLTINLGEDG--KVASQSRSKQMFSVK-DDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK 247 (361)
T ss_dssp TTSSEEEEEECTTS--SEEEEEECCCCSCTT-TSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH
T ss_pred CCCcEEEEEECCCC--cEeeeccccceEcCC-CCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc
Confidence 78888888875321 111 100 0000 111234457888888888889999999986543 222222110
Q ss_pred -CC--CCcceEEEECCCCCEEEEEcC-----------CCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEecc-c
Q 020021 249 -VS--RNSTLEASFSPEGMFVISGSG-----------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS-S 313 (332)
Q Consensus 249 -~~--~~~~~~v~~spdg~~l~sgs~-----------Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~-~ 313 (332)
.. .....-++|+||++.++.+.. ..+|.+||+.+++.+.++..+. +..++|+|||++|.++. .
T Consensus 248 ~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~ 325 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGG 325 (361)
T ss_dssp HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSS
T ss_pred ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCC
Confidence 00 011112789999888777643 3489999999999999887776 89999999998776654 4
Q ss_pred eEEEeccccc
Q 020021 314 ELSFWIPDLS 323 (332)
Q Consensus 314 d~~~w~~~~~ 323 (332)
.+.+|+....
T Consensus 326 ~v~v~D~~t~ 335 (361)
T 2oiz_A 326 NVNVYDISQP 335 (361)
T ss_dssp CEEEEECSSS
T ss_pred eEEEEECCCC
Confidence 5999987654
No 169
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.79 E-value=1.9e-16 Score=142.56 Aligned_cols=235 Identities=11% Similarity=0.100 Sum_probs=150.3
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEe-CCCcEEEEEcCCCeeeEEee---ec-----------ccceeEEEEccCC
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTAS-DDESIRLYDVTAATCLKTIN---SK-----------KYGVDLVCFTSHP 88 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs-~D~tv~iwd~~~~~~~~~~~---~~-----------~~~v~~~~~~~~~ 88 (332)
++....+..+......+++ ++++|++++ .|+++.+|++.....+..+. .+ ...+..++|+|++
T Consensus 89 ~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 89 LHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp EEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred EEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 3444455556667778888 788777666 68899999997543332211 11 1124679999999
Q ss_pred CEEEEecCCCCCceeEEEEccCCce------E-------EEeecccccEEEEEecCCCCeEEEee-CCCcEEEEeCCCce
Q 020021 89 TTVIYSSKNGWDESLRLLSLHDNKY------L-------RYFKGHHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQRAEK 154 (332)
Q Consensus 89 ~~~~~~s~~g~d~~v~v~d~~~~~~------~-------~~~~~h~~~V~~v~~~~~~~~l~s~s-~Dg~i~iWd~~~~~ 154 (332)
+.++++.. .++.+++|++..... + .....+......++|+|++++++.++ .++.|.+||+.++.
T Consensus 167 ~~l~~~~~--~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 167 KYLLADDL--GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp SEEEEEET--TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred CEEEEEeC--CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 98877653 267899999875431 1 11223445678999999999877666 68999999987654
Q ss_pred EEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcC--CCeEEE
Q 020021 155 CQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM--EGHIHV 232 (332)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~--dg~i~i 232 (332)
......... ...+......++|||||++++++.. ++.|.+
T Consensus 245 ~~~~~~~~~--------------------------------------~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v 286 (361)
T 3scy_A 245 LDEIQTVAA--------------------------------------DTVNAQGSGDIHLSPDGKYLYASNRLKADGVAI 286 (361)
T ss_dssp EEEEEEEES--------------------------------------CSSCCCCEEEEEECTTSSEEEEEECSSSCEEEE
T ss_pred eEEeEEEec--------------------------------------CCCCCCCcccEEECCCCCEEEEECCCCCCEEEE
Confidence 321111000 0001123467899999998866554 589999
Q ss_pred EEcc--CCeEeEEeeecCCCCCcceEEEECCCCCEEEEEc-CCCcEEEEEC--CCCceEEEe-cCCCCCCceEEeC
Q 020021 233 LDSF--RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVYAWSV--RSGKEVASW-MSFDTEPPVIKWT 302 (332)
Q Consensus 233 ~d~~--~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs-~Dg~i~vWd~--~~~~~~~~~-~~~~~~v~~l~~s 302 (332)
|++. +++........ . ...+..++|+|||++|++++ .++.|.+|++ .+++..... ..+...+.||.|.
T Consensus 287 ~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 287 FKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEcCCCCcEEEeeEec-C-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 9985 45532222211 1 24556899999999988887 6789999654 466544332 1233457788875
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=1e-17 Score=151.93 Aligned_cols=262 Identities=10% Similarity=0.027 Sum_probs=171.9
Q ss_pred EEEEcCCCeeeEEeeecccceeE-----EEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCC
Q 020021 59 RLYDVTAATCLKTINSKKYGVDL-----VCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK 133 (332)
Q Consensus 59 ~iwd~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~ 133 (332)
..+|..++..+..+..+...... .+|+|+++.+++.+...-...+.+||+.+++......+|...+..+.|+||+
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg 92 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD 92 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC
Confidence 44577788887777766544443 6899999999888752213368888999988877777777766677899999
Q ss_pred CeEEEeeCCCcEEEEeCCCceEEEEEEecCce----eEEEcCCCeEEEEE-----------------------eCCEEEE
Q 020021 134 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP----AAAYDDQGLVFAVA-----------------------FGGYIRM 186 (332)
Q Consensus 134 ~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-----------------------~~~~i~v 186 (332)
+.|+.++.++.+.+||+.+++.......+... ....++++..+++. .+..|.+
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 99999999999999999988776555544321 12345666555432 2257889
Q ss_pred EECccCCCCCeeEEEecCCCCCceeEEEcC-CCCEEEEEcCC------CeEEEEEccCCeEeEEeeecCCCC-CcceEEE
Q 020021 187 FDARKYEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTME------GHIHVLDSFRGTLLSTYNVKPVSR-NSTLEAS 258 (332)
Q Consensus 187 wd~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~-~~~~~v~ 258 (332)
||+...+ ...+. .+...+..++||| ||+.++....+ ..|.++|...++.. .+. .... ..+...+
T Consensus 173 ~d~~~g~---~~~l~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~--~~~~~~~~~~~~ 244 (388)
T 3pe7_A 173 VDLKTGE---STVIL--QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVK--THAEGESCTHEF 244 (388)
T ss_dssp EETTTCC---EEEEE--EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESC--CCCTTEEEEEEE
T ss_pred EECCCCc---eEEee--cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-Eee--eCCCCcccccce
Confidence 9987542 22221 2223567889999 99988877653 37888887655432 221 1111 2455679
Q ss_pred ECCCCCEEEEEcCC-C----cEEEEECCCCce--EEEecCCC---CCCceEEeCCCeeEEEec-----------cceEEE
Q 020021 259 FSPEGMFVISGSGD-G----SVYAWSVRSGKE--VASWMSFD---TEPPVIKWTPGSLMFVTG-----------SSELSF 317 (332)
Q Consensus 259 ~spdg~~l~sgs~D-g----~i~vWd~~~~~~--~~~~~~~~---~~v~~l~~sp~~~~l~t~-----------~~d~~~ 317 (332)
|||||+.|+..+.+ + .|++||+.+++. +..+..+. .....++|+|||+.++.. ..++.+
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~ 324 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYV 324 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEE
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEE
Confidence 99999988665432 2 399999998874 22322210 012345799999877642 234777
Q ss_pred ecccccccccc
Q 020021 318 WIPDLSKLGAY 328 (332)
Q Consensus 318 w~~~~~~~~~~ 328 (332)
|+++..++.++
T Consensus 325 ~d~~~~~~~~l 335 (388)
T 3pe7_A 325 FNMKNGTQHRV 335 (388)
T ss_dssp EETTTTEEEEE
T ss_pred EeccCCceEEe
Confidence 87766555444
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=4e-16 Score=139.37 Aligned_cols=263 Identities=8% Similarity=0.048 Sum_probs=171.4
Q ss_pred cEEEEEECCCCCEEEEEe---------CCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCC--CCceeE
Q 020021 36 RISSMDFHKSSSYLVTAS---------DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLR 104 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs---------~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g--~d~~v~ 104 (332)
.+....+ ||++++... .++.|.+||+.+++... + ..+...+|+|+++.+++.+..+ ....+.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 4667777 888886642 36789999999887543 3 3567789999999998876432 133578
Q ss_pred EEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCC---------------------------CcEEEEeCCCceEEE
Q 020021 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD---------------------------RTVLLWDQRAEKCQG 157 (332)
Q Consensus 105 v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~D---------------------------g~i~iWd~~~~~~~~ 157 (332)
+||+.+++.......+ . +..+.|+||++.|+.++.+ ..|.+||+.+++...
T Consensus 89 ~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 89 VADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp EEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred EEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 8888887765554444 3 9999999999998888743 578999998887623
Q ss_pred EEEecCceeEEEcCCCeEEEEEe-C------C-EEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCC--
Q 020021 158 LLRVQGRPAAAYDDQGLVFAVAF-G------G-YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-- 227 (332)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-~------~-~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~d-- 227 (332)
.+..+......+++++ ++.++. + . ..++|.+.. +....+.. + ..+. .+||||+.++..+.+
T Consensus 167 ~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~---~~~~~l~~--~-~~~~--~~spdg~~l~~~~~~~~ 237 (347)
T 2gop_A 167 EFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWED---GKEEKMFE--K-VSFY--AVDSDGERILLYGKPEK 237 (347)
T ss_dssp EEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEET---TEEEEEEE--E-ESEE--EEEECSSCEEEEECCSS
T ss_pred eecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCC---CceEEecc--C-ccee--eECCCCCEEEEEEcccc
Confidence 3322233455677777 554443 2 1 345554431 22222211 1 2233 349999988877644
Q ss_pred ------CeEEEEEccCCeEeEEeeecCCCCCcceE-EEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEE
Q 020021 228 ------GHIHVLDSFRGTLLSTYNVKPVSRNSTLE-ASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIK 300 (332)
Q Consensus 228 ------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~-v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~ 300 (332)
..|++|| +++..... ..+...+.. +.|+ |+ ++++++.|+.++|| +.+++. ..+..+...+..++
T Consensus 238 ~~~~~~~~l~~~d--~~~~~~l~---~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~~ 308 (347)
T 2gop_A 238 KYMSEHNKLYIYD--GKEVMGIL---DEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGFD 308 (347)
T ss_dssp SCCCSSCEEEEEC--SSCEEESS---TTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEEE
T ss_pred CCccccceEEEEC--CCceEecc---ccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEeee
Confidence 4788888 55543221 223345555 7899 88 99999999999999 876554 44445566788999
Q ss_pred eCCCeeEEEeccce---EEEecccccccccc
Q 020021 301 WTPGSLMFVTGSSE---LSFWIPDLSKLGAY 328 (332)
Q Consensus 301 ~sp~~~~l~t~~~d---~~~w~~~~~~~~~~ 328 (332)
|+| .++++++.+ ..+|.++ .++.++
T Consensus 309 ~s~--~~~~~~~~~~~~~~l~~~~-g~~~~l 336 (347)
T 2gop_A 309 VDE--IVVYLKETATRLRELFTWD-GEEKQL 336 (347)
T ss_dssp ESS--SEEEEEECSSSCCEEEEES-SSEEEC
T ss_pred eeC--cEEEEEcCCCChHHheEeC-CcEEEe
Confidence 999 455554433 4788776 444433
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.77 E-value=3.1e-16 Score=139.44 Aligned_cols=267 Identities=12% Similarity=0.186 Sum_probs=181.2
Q ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce
Q 020021 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (332)
Q Consensus 34 ~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~ 113 (332)
+..|.++.|++++..++..+.+++++.| .++....+..+...+..++|.+++...++... ++.|.+||.++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~---~~~i~~~d~~~~~~ 78 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVF---EGNIFKINPETKEI 78 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETT---TCEEEEECTTTCCE
T ss_pred ccccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECC---CCEEEEEeCCCCcE
Confidence 3457888999999888888999999999 35666666666666788899988874444432 67899999988876
Q ss_pred EEEeecccccEEEEEecCCCCeEEEeeCC----CcEEEEeCCCceEEEEEEe--c--CceeEEEcCCCeEEEEEeC----
Q 020021 114 LRYFKGHHDRVVSLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLLRV--Q--GRPAAAYDDQGLVFAVAFG---- 181 (332)
Q Consensus 114 ~~~~~~h~~~V~~v~~~~~~~~l~s~s~D----g~i~iWd~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~---- 181 (332)
......+...+.+++++++++.+++...+ +.|.+||..++.....+.. . ......+++++.++.+...
T Consensus 79 ~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~ 158 (333)
T 2dg1_A 79 KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYST 158 (333)
T ss_dssp EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTT
T ss_pred EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccccc
Confidence 65554667889999999999988887776 7899999887765433221 1 1234566777776666543
Q ss_pred ---CEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEE-EEEcCCCeEEEEEccC-CeEeEEee----ecCCCCC
Q 020021 182 ---GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLM-LLTTMEGHIHVLDSFR-GTLLSTYN----VKPVSRN 252 (332)
Q Consensus 182 ---~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l-~~~~~dg~i~i~d~~~-~~~~~~~~----~~~~~~~ 252 (332)
+.|..+|.... .+..+. ......+.++++|||+.+ ++.+.++.|++||... +..+..+. .......
T Consensus 159 ~~~~~l~~~~~~~~---~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~ 233 (333)
T 2dg1_A 159 NPLGGVYYVSPDFR---TVTPII--QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHE 233 (333)
T ss_dssp BCCEEEEEECTTSC---CEEEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSS
T ss_pred CCCceEEEEeCCCC---EEEEee--cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCC
Confidence 45555554321 222221 111246789999999854 5566789999999863 33222110 0000113
Q ss_pred cceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCC------CCceEEeCCCee-EEEecc
Q 020021 253 STLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDT------EPPVIKWTPGSL-MFVTGS 312 (332)
Q Consensus 253 ~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~------~v~~l~~sp~~~-~l~t~~ 312 (332)
.+..++++++|+++++...++.|++||. +++.+..+..... .+..++|+||++ ++++..
T Consensus 234 ~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 234 GPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred CCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 4567899999999888888899999998 5666666544332 588999999974 444443
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.77 E-value=2.2e-15 Score=131.88 Aligned_cols=247 Identities=12% Similarity=0.052 Sum_probs=168.6
Q ss_pred ccceeEeccCCCcEEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCce
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~-~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~ 102 (332)
......+..+.....++.|+|+|+ +++++..++.|..||..++ ...+..+...+..+++.+++..+++... ++.
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~---~~~ 91 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHG---LRR 91 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETT---TTE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecC---CCe
Confidence 344556667777889999999998 7888999999999999887 5566656666788999999875554431 568
Q ss_pred eEEEEccCCceEEEeecc----cccEEEEEecCCCCeEEEeeCCC-----------------cEEEEeCCCceEEEEEEe
Q 020021 103 LRLLSLHDNKYLRYFKGH----HDRVVSLSLCSSKDCFISGSLDR-----------------TVLLWDQRAEKCQGLLRV 161 (332)
Q Consensus 103 v~v~d~~~~~~~~~~~~h----~~~V~~v~~~~~~~~l~s~s~Dg-----------------~i~iWd~~~~~~~~~~~~ 161 (332)
|.+||.++++........ ...+..+++.|+|+.++|.+.+| .|..+|.. ++
T Consensus 92 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~------- 163 (296)
T 3e5z_A 92 LERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT------- 163 (296)
T ss_dssp EEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-------
T ss_pred EEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-------
Confidence 999999887754433322 23456789999999888743222 22222211 11
Q ss_pred cCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEcc-CCeE
Q 020021 162 QGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF-RGTL 240 (332)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~-~~~~ 240 (332)
++. . .......+.++++|||+.+++.+.++.|++||+. .+++
T Consensus 164 ----------------------~~~-------------~--~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 164 ----------------------LSA-------------P--IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp ----------------------EEE-------------E--ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCE
T ss_pred ----------------------EEE-------------e--ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcC
Confidence 000 0 0112234678999999988777888999999986 5554
Q ss_pred ---eEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEe-CCCeeEEEeccce-E
Q 020021 241 ---LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKW-TPGSLMFVTGSSE-L 315 (332)
Q Consensus 241 ---~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~-sp~~~~l~t~~~d-~ 315 (332)
...+ ......+..++++++|+++++. ++.|++||.. ++.+..+..+.. +++++| +|+++.|..++.+ +
T Consensus 207 ~~~~~~~---~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l 279 (296)
T 3e5z_A 207 EYQGVHF---TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEF 279 (296)
T ss_dssp EEEEEEE---CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEE
T ss_pred cCCCeEe---eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeE
Confidence 2222 1233445578999999987776 7889999985 777777776666 899999 6888755554443 4
Q ss_pred EEeccccccccc
Q 020021 316 SFWIPDLSKLGA 327 (332)
Q Consensus 316 ~~w~~~~~~~~~ 327 (332)
-..++...+|+.
T Consensus 280 ~~~~~~~~~~~~ 291 (296)
T 3e5z_A 280 WSIETNVRGLEH 291 (296)
T ss_dssp EEEECSCCBCCC
T ss_pred EEEEcccccccc
Confidence 445566655543
No 174
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=2.3e-15 Score=134.13 Aligned_cols=259 Identities=9% Similarity=0.106 Sum_probs=179.5
Q ss_pred CCCcEEEEEcCCCeeeEEeeec------ccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEE
Q 020021 54 DDESIRLYDVTAATCLKTINSK------KYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSL 127 (332)
Q Consensus 54 ~D~tv~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v 127 (332)
.+++|.+||.++++....+... ......+++ ++..++.+.. .++.|.++|.++++.+..+.. ......+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~--~~~~v~viD~~t~~~~~~i~~-~~~p~~i 89 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVN--NSHVIFAIDINTFKEVGRITG-FTSPRYI 89 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEG--GGTEEEEEETTTCCEEEEEEC-CSSEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEc--CCCEEEEEECcccEEEEEcCC-CCCCcEE
Confidence 4899999999999877654211 112344555 3445555443 267899999999998888753 4668899
Q ss_pred EecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC------ce-eEEEcCCCeEEEEEe--CCEEEEEECccCCCCCee
Q 020021 128 SLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG------RP-AAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPFD 198 (332)
Q Consensus 128 ~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~--~~~i~vwd~~~~~~~~~~ 198 (332)
+++++++..++...++.|.+||.++++....+.... .+ ...+ .++.++.+.. ++.|.++|..+.+. ..
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~--~~ 166 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKV--VD 166 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEE--EE
T ss_pred EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeE--EE
Confidence 998888666666689999999999988776666543 33 2333 4555555553 78999999875421 12
Q ss_pred EEEecCCCCCceeEEEcCCCCEEEEEcCC----------CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEE
Q 020021 199 IFSVGGDISDANVVKFSNDGRLMLLTTME----------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268 (332)
Q Consensus 199 ~~~~~~~~~~v~~v~~s~dg~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~s 268 (332)
..... .....++++|+|++++++..+ +.|.++|..++++...+.... ......++|+||+++|+.
T Consensus 167 ~i~~g---~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~--g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 167 ELTIG---IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL--GDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp EEECS---SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT--TCCCEEEEECTTSCEEEE
T ss_pred EEEcC---CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC--CCCceeEEEecCCCEEEE
Confidence 22222 234678899999988877655 799999999998877665322 135668999999999988
Q ss_pred EcCCCcEEEEECCCCceEEE-e-cCCCCCCceEEeCC-CeeEEEec----c--ceEEEeccccccccc
Q 020021 269 GSGDGSVYAWSVRSGKEVAS-W-MSFDTEPPVIKWTP-GSLMFVTG----S--SELSFWIPDLSKLGA 327 (332)
Q Consensus 269 gs~Dg~i~vWd~~~~~~~~~-~-~~~~~~v~~l~~sp-~~~~l~t~----~--~d~~~w~~~~~~~~~ 327 (332)
+.. .|.+||..+++.... + ......+..++++| +++++++. . ..+.+|+++.+.+..
T Consensus 242 ~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~ 307 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDE 307 (328)
T ss_dssp ESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEE
T ss_pred Ecc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEE
Confidence 765 899999988775321 1 11134578899999 67777776 3 348888887544443
No 175
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.73 E-value=3.8e-16 Score=153.10 Aligned_cols=249 Identities=12% Similarity=0.046 Sum_probs=162.2
Q ss_pred cCCCcEEEEEECCCCCEEE-----EEeCCCcEEEEEcCCCeee-EEeeecccceeEEEEccCCCEEEEecCCC-------
Q 020021 32 DYNGRISSMDFHKSSSYLV-----TASDDESIRLYDVTAATCL-KTINSKKYGVDLVCFTSHPTTVIYSSKNG------- 98 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~-----tgs~D~tv~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~s~~g------- 98 (332)
+|+..+.+++|||||++|| +|+.+.+|++||+.+++.+ ... ........++|+|+++.+++++...
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV-IEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC-BSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc-cCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 5666899999999999998 6666789999999998865 211 1111125689999999998886522
Q ss_pred ---CCceeEEEEccCCc----eEEEeecccccEEEEEecCCCCeEEEeeCCC----cEEEEeCCCceEEEEEEec-Ccee
Q 020021 99 ---WDESLRLLSLHDNK----YLRYFKGHHDRVVSLSLCSSKDCFISGSLDR----TVLLWDQRAEKCQGLLRVQ-GRPA 166 (332)
Q Consensus 99 ---~d~~v~v~d~~~~~----~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg----~i~iWd~~~~~~~~~~~~~-~~~~ 166 (332)
....|++|++.+++ .+.....|...+..+.|+|||++|+..+.++ .|.+||..++......... ....
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 276 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYE 276 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEE
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEE
Confidence 12349999998876 3333345667889999999999998888776 6777776554433322211 1222
Q ss_pred EEEcCCCeEEEEEe----CCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEcc-CCeEe
Q 020021 167 AAYDDQGLVFAVAF----GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF-RGTLL 241 (332)
Q Consensus 167 ~~~~~~~~~~~~~~----~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~-~~~~~ 241 (332)
....++. ++..+. ++.|.+||+..........+........+..++++ ++.++++...++..++|... .+..+
T Consensus 277 ~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~ 354 (695)
T 2bkl_A 277 VHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPV 354 (695)
T ss_dssp EEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEE
T ss_pred EEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCee
Confidence 2333333 444443 37899999865431111222211112345667887 77888888999988777654 35544
Q ss_pred EEeeecCCCCCcceEEEECCCCCEEE----EEcCCCcEEEEECCCCce
Q 020021 242 STYNVKPVSRNSTLEASFSPEGMFVI----SGSGDGSVYAWSVRSGKE 285 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~v~~spdg~~l~----sgs~Dg~i~vWd~~~~~~ 285 (332)
..+... ....+..++++||++.++ +....++|++||+.+++.
T Consensus 355 ~~l~~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 355 RTVQLP--GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EECCCS--SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEecCC--CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 444321 134555678899998777 444567999999988763
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=3.7e-15 Score=146.38 Aligned_cols=249 Identities=11% Similarity=0.076 Sum_probs=164.5
Q ss_pred cCCCcEEEEEECCCCCEEEEEeCCC-----cEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCC-------
Q 020021 32 DYNGRISSMDFHKSSSYLVTASDDE-----SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW------- 99 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~tgs~D~-----tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~------- 99 (332)
+|+..+.+++|||||++||.++.++ +|++||+.+++.+.....+ ..+..++|+|+++.+++++..+.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3556789999999999998776554 8999999999887643222 23567899999999998875322
Q ss_pred ------CceeEEEEccCCce--EEEee--cccccEEEEEecCCCCeEEEeeC-----CCcEEEEeCCC------ce-EEE
Q 020021 100 ------DESLRLLSLHDNKY--LRYFK--GHHDRVVSLSLCSSKDCFISGSL-----DRTVLLWDQRA------EK-CQG 157 (332)
Q Consensus 100 ------d~~v~v~d~~~~~~--~~~~~--~h~~~V~~v~~~~~~~~l~s~s~-----Dg~i~iWd~~~------~~-~~~ 157 (332)
...|++|++.+++. ...+. .|...+..+.|+|||++|+..+. +..|.+||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 23499999988762 23333 35666889999999998887765 56899999875 32 222
Q ss_pred EEEecC-ceeEEEcCCC-eEEEEEeC----CEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCC--e
Q 020021 158 LLRVQG-RPAAAYDDQG-LVFAVAFG----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG--H 229 (332)
Q Consensus 158 ~~~~~~-~~~~~~~~~~-~~~~~~~~----~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg--~ 229 (332)
.+.... .....+++++ .++..+.. ..|.+||+..........+........+..+++++++.++++...++ .
T Consensus 281 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 281 KLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred EeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 232211 1112334433 44444432 37999998654211112221111112466788888888888888888 4
Q ss_pred EEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEE----cCCCcEEEEECCCCc
Q 020021 230 IHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG----SGDGSVYAWSVRSGK 284 (332)
Q Consensus 230 i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sg----s~Dg~i~vWd~~~~~ 284 (332)
|++||+.+|+.+..+.. +...+..++++|++..++.. ...+++++||+.+++
T Consensus 361 l~~~~~~~g~~~~~l~~---~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 361 LQLHDLATGALLKIFPL---EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTTCCEEEEECC---CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCCCCEEEecCC---CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 66778767776665542 34566678899999766532 345799999998876
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.72 E-value=3.5e-13 Score=117.18 Aligned_cols=277 Identities=7% Similarity=0.058 Sum_probs=188.2
Q ss_pred eccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEE-eeecccceeEEEEccCCCEEEEecCCCCCceeEEEEc
Q 020021 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (332)
Q Consensus 30 l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~ 108 (332)
+..+...+.+|.++++|+++++...++.|.+||.. ++.... +......+..+++.+++...+.... ++.+..||.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~ 85 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITK 85 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECT
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECC
Confidence 45566789999999999988887778999999988 544321 1223445778888888765544322 467888887
Q ss_pred cCCce-EEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec----CceeEEEcCCCeEEEEEe-CC
Q 020021 109 HDNKY-LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFAVAF-GG 182 (332)
Q Consensus 109 ~~~~~-~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~ 182 (332)
+ ++. ...+..+...+.++.+.++++.+++...++.|..||. +++... +... .......++++.++.+.. ++
T Consensus 86 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 162 (299)
T 2z2n_A 86 K-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YELPNKGSYPSFITLGSDNALWFTENQNN 162 (299)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred C-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecCCCCCCCCceEEEcCCCCEEEEeCCCC
Confidence 6 332 1222234567899999999998888888899999998 444332 2211 123445666776666554 57
Q ss_pred EEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCC
Q 020021 183 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 262 (332)
Q Consensus 183 ~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spd 262 (332)
.|..||. . +.+..+........+..++++++|+++++...++.|.+||. +++... +... .....+..++++|+
T Consensus 163 ~i~~~~~-~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~-~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 163 AIGRITE-S---GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIP-TPNARPHAITAGAG 235 (299)
T ss_dssp EEEEECT-T---CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECS-STTCCEEEEEECST
T ss_pred EEEEEcC-C---CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECC-CCCCCceeEEECCC
Confidence 8999987 3 22333322223345678999999998888888899999998 666432 3221 23356678999999
Q ss_pred CCEEEEEcCCCcEEEEECCCCceEEEe--cCCCCCCceEEeCCCeeEEEecc-ceEEEeccccc
Q 020021 263 GMFVISGSGDGSVYAWSVRSGKEVASW--MSFDTEPPVIKWTPGSLMFVTGS-SELSFWIPDLS 323 (332)
Q Consensus 263 g~~l~sgs~Dg~i~vWd~~~~~~~~~~--~~~~~~v~~l~~sp~~~~l~t~~-~d~~~w~~~~~ 323 (332)
|+.+++...++.|.+||. +++. ..+ ..+...+.++++ ++++++++.. ..+..++++..
T Consensus 236 g~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 236 IDLWFTEWGANKIGRLTS-NNII-EEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp TCEEEEETTTTEEEEEET-TTEE-EEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred CCEEEeccCCceEEEECC-CCce-EEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence 998887767889999998 4543 333 334456788999 9998887754 44666776554
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=5.3e-16 Score=140.71 Aligned_cols=259 Identities=10% Similarity=0.049 Sum_probs=161.8
Q ss_pred EEEcCCCeeeEEeeecccc-----eeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCC
Q 020021 60 LYDVTAATCLKTINSKKYG-----VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 134 (332)
Q Consensus 60 iwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~ 134 (332)
..|..++..+..+..+... +..++|+|+++.+++....+.+..+.+||+.+++......++......+.|+|||+
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~ 93 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER 93 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC
Confidence 4477777777666544322 56678999999988876543355788899988876554443333233478999999
Q ss_pred eEEEeeCCCcEEEEeCCCceEEEEEEecCce--e---E----------------EEcCCCeEEEE------EeCCEEEEE
Q 020021 135 CFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--A---A----------------AYDDQGLVFAV------AFGGYIRMF 187 (332)
Q Consensus 135 ~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~--~---~----------------~~~~~~~~~~~------~~~~~i~vw 187 (332)
.|+.++.++.|.+||+.+++.......+... . . .+.+++..+.. ..+..|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~ 173 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKV 173 (396)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEE
T ss_pred EEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEE
Confidence 9999999999999999887765544432211 0 0 11222221111 234578889
Q ss_pred ECccCCCCCeeEEEecCCCCCceeEEEcC-CCCEEEEEcCC------CeEEEEEccCCeEeEEeeecCCCCCcceEEEEC
Q 020021 188 DARKYEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTME------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS 260 (332)
Q Consensus 188 d~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~s 260 (332)
|+...+ ..... .....+..+.|+| ||+.++..+.+ ..|.+||...++...... ......+..++|+
T Consensus 174 d~~~g~---~~~~~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~--~~~~~~~~~~~~s 246 (396)
T 3c5m_A 174 DIETGE---LEVIH--QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE--HAEGESCTHEFWI 246 (396)
T ss_dssp ETTTCC---EEEEE--EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC--CCTTEEEEEEEEC
T ss_pred ECCCCc---EEeec--cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec--cCCCccccceEEC
Confidence 986532 22111 1234567889999 88877665543 468889987654322111 0012245568999
Q ss_pred CCCCEEEEEcCC-----CcEEEEECCCCceEEEecCCCCCCceEEeCC-CeeEEEecc------------------ceEE
Q 020021 261 PEGMFVISGSGD-----GSVYAWSVRSGKEVASWMSFDTEPPVIKWTP-GSLMFVTGS------------------SELS 316 (332)
Q Consensus 261 pdg~~l~sgs~D-----g~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp-~~~~l~t~~------------------~d~~ 316 (332)
|||++|+.++.+ +.|++||+.+++... +..... .. +.|+| |+++++.++ .++.
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~ 323 (396)
T 3c5m_A 247 PDGSAMAYVSYFKGQTDRVIYKANPETLENEE-VMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLY 323 (396)
T ss_dssp TTSSCEEEEEEETTTCCEEEEEECTTTCCEEE-EEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEE
T ss_pred CCCCEEEEEecCCCCccceEEEEECCCCCeEE-eeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEE
Confidence 999988877654 459999998876433 222222 22 88999 999887643 3477
Q ss_pred Eecccccccccc
Q 020021 317 FWIPDLSKLGAY 328 (332)
Q Consensus 317 ~w~~~~~~~~~~ 328 (332)
+|+++..++..+
T Consensus 324 ~~d~~~~~~~~l 335 (396)
T 3c5m_A 324 VLNTKAKSAQKL 335 (396)
T ss_dssp EEETTTTBCCEE
T ss_pred EEecccCceEEc
Confidence 777655544433
No 179
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=2.8e-15 Score=147.94 Aligned_cols=274 Identities=8% Similarity=0.052 Sum_probs=168.1
Q ss_pred ceeEeccCCCc-----EEEEEECCCCCEEEEEeCC---------CcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEE
Q 020021 26 VGMSFRDYNGR-----ISSMDFHKSSSYLVTASDD---------ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTV 91 (332)
Q Consensus 26 ~~~~l~~h~~~-----I~~i~~s~dg~~l~tgs~D---------~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 91 (332)
....+.+|+.. ...++|||||++|+.++.| +.+.+||+.++++.. +..+...+...+|+|+++.+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~l 126 (740)
T 4a5s_A 48 SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKL 126 (740)
T ss_dssp EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCE
T ss_pred eEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-cccCCCcceeeEECCCCCEE
Confidence 34456777643 2347889999999999987 455699999998654 55556678899999999999
Q ss_pred EEecCCCCCceeEEEEccCCceEEE-eecccccE-----------------EEEEecCCCCeEEEeeCCC----------
Q 020021 92 IYSSKNGWDESLRLLSLHDNKYLRY-FKGHHDRV-----------------VSLSLCSSKDCFISGSLDR---------- 143 (332)
Q Consensus 92 ~~~s~~g~d~~v~v~d~~~~~~~~~-~~~h~~~V-----------------~~v~~~~~~~~l~s~s~Dg---------- 143 (332)
++++ ++.|.+||+.+++..+. ..++...+ .++.|||||+.|+.++.|.
T Consensus 127 a~~~----~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~ 202 (740)
T 4a5s_A 127 AYVW----NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSF 202 (740)
T ss_dssp EEEE----TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEE
T ss_pred EEEE----CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEe
Confidence 8875 67899999988775542 33444433 2488999999999886443
Q ss_pred --------------------------cEEEEeCCC---c---eEEEEEEe------c--CceeEEEcCCCeEEEEE-e-C
Q 020021 144 --------------------------TVLLWDQRA---E---KCQGLLRV------Q--GRPAAAYDDQGLVFAVA-F-G 181 (332)
Q Consensus 144 --------------------------~i~iWd~~~---~---~~~~~~~~------~--~~~~~~~~~~~~~~~~~-~-~ 181 (332)
+|.+||+.+ + +... +.. . ......+++++.+++.. . +
T Consensus 203 ~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~ 281 (740)
T 4a5s_A 203 YSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ-ITAPASMLIGDHYLCDVTWATQERISLQWLRRI 281 (740)
T ss_dssp CCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE-ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESS
T ss_pred ecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE-ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCC
Confidence 478888887 6 3222 211 1 12234667777644433 2 1
Q ss_pred ---CEEEEEECccCC----CC-CeeEEEecCCCCC-----ceeEEEcCCCCEEE-EEcC-C--CeEEEEEccCCeEeEEe
Q 020021 182 ---GYIRMFDARKYE----KG-PFDIFSVGGDISD-----ANVVKFSNDGRLML-LTTM-E--GHIHVLDSFRGTLLSTY 244 (332)
Q Consensus 182 ---~~i~vwd~~~~~----~~-~~~~~~~~~~~~~-----v~~v~~s~dg~~l~-~~~~-d--g~i~i~d~~~~~~~~~~ 244 (332)
..|.+||+...+ .. ...... ..+..- .....|||||+.++ ..+. + .+|++||...++... +
T Consensus 282 ~~~~~i~~~d~~tg~~~~~~~~~~~l~~-~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-l 359 (740)
T 4a5s_A 282 QNYSVMDICDYDESSGRWNCLVARQHIE-MSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-I 359 (740)
T ss_dssp TTEEEEEEEEEETTTTEEEECGGGCEEE-ECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-S
T ss_pred CCEEEEEEEECCCCccccceeEEEEeee-ccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-c
Confidence 379999987643 00 111111 122222 23678999999876 5543 3 478889987665432 2
Q ss_pred eecCCCCCcceEEEECCCCCEEE-EEcC--C--C--cEEEEECCCCceEEEecC----CCCCCceEEeCCCeeEEEec
Q 020021 245 NVKPVSRNSTLEASFSPEGMFVI-SGSG--D--G--SVYAWSVRSGKEVASWMS----FDTEPPVIKWTPGSLMFVTG 311 (332)
Q Consensus 245 ~~~~~~~~~~~~v~~spdg~~l~-sgs~--D--g--~i~vWd~~~~~~~~~~~~----~~~~v~~l~~sp~~~~l~t~ 311 (332)
. .. ...+..+ +++|++.|+ +++. + + .|+..++..++....+.. ........+|||++++++..
T Consensus 360 T--~g-~~~v~~~-~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~ 433 (740)
T 4a5s_A 360 T--KG-TWEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLR 433 (740)
T ss_dssp C--CS-SSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEE
T ss_pred c--cC-CEEEEEE-EEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEE
Confidence 1 11 2223333 224565544 4443 1 2 455555544332223332 23456789999999866543
No 180
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.70 E-value=2.5e-14 Score=124.33 Aligned_cols=218 Identities=10% Similarity=0.093 Sum_probs=166.3
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeeeEEeeecc-cceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeeccc-c
Q 020021 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH-D 122 (332)
Q Consensus 45 dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~-~ 122 (332)
.+++|++++.|+.|.+||.++|+.+.++..+. ..+..+.+.|+++.++ +. ++.|..+|. +++.+..+..+. .
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~----~~~V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SY----SKGAKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-EC----BSEEEEECT-TSCEEEEEECCTTC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eC----CCCEEEECC-CCCEEEEEcCCCCc
Confidence 46899999999999999999999999888765 4678889999998766 32 567999999 788888888653 5
Q ss_pred cEEEEEecCCCCeEEEeeC-CCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEE
Q 020021 123 RVVSLSLCSSKDCFISGSL-DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFS 201 (332)
Q Consensus 123 ~V~~v~~~~~~~~l~s~s~-Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~ 201 (332)
.+.++.+.++|+.+++.+. ++.+..+|. +++.+..+.... ..
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~----------------------------~~-------- 120 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFET----------------------------GI-------- 120 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECC----------------------------SC--------
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccC----------------------------CC--------
Confidence 7889999999999999887 777777775 444333322110 00
Q ss_pred ecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECC
Q 020021 202 VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR 281 (332)
Q Consensus 202 ~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~ 281 (332)
..+......+++.++|.++++...++.|.+||.. |+.+-++... .....+.+.|+|+.+++++.++.|..+|..
T Consensus 121 -~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 121 -ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS----GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp -SSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS----SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred -CcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC----CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 0011123456789999999999999999999987 9988777642 234467888999999999888899999999
Q ss_pred CCceEEEecCCC------CCCceEEeCCCeeEEEec
Q 020021 282 SGKEVASWMSFD------TEPPVIKWTPGSLMFVTG 311 (332)
Q Consensus 282 ~~~~~~~~~~~~------~~v~~l~~sp~~~~l~t~ 311 (332)
+++.+..+.... ..+..+...++|+.+++.
T Consensus 195 tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 195 SNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp TCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 999988875432 114567778899888886
No 181
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.69 E-value=1e-14 Score=131.79 Aligned_cols=211 Identities=9% Similarity=0.050 Sum_probs=139.2
Q ss_pred EEEEEECCCCCE--EEEEe-------------CCCcEEEEEcC-CCeeeEEeee----cccceeEEEEccCCCEEEEecC
Q 020021 37 ISSMDFHKSSSY--LVTAS-------------DDESIRLYDVT-AATCLKTINS----KKYGVDLVCFTSHPTTVIYSSK 96 (332)
Q Consensus 37 I~~i~~s~dg~~--l~tgs-------------~D~tv~iwd~~-~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~s~ 96 (332)
+..++|+|||++ +++++ .|+++++|++. +++....+.. +...+..++|+|+++.++++..
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 456889999984 55653 69999999997 4665544432 3446788999999998876643
Q ss_pred CCCCceeEEEEcc-CCceE--EEee--cccccEEEEEecCCCCeEEEeeC-CCcEEEEeCC--CceEEEEEE-ecCceeE
Q 020021 97 NGWDESLRLLSLH-DNKYL--RYFK--GHHDRVVSLSLCSSKDCFISGSL-DRTVLLWDQR--AEKCQGLLR-VQGRPAA 167 (332)
Q Consensus 97 ~g~d~~v~v~d~~-~~~~~--~~~~--~h~~~V~~v~~~~~~~~l~s~s~-Dg~i~iWd~~--~~~~~~~~~-~~~~~~~ 167 (332)
+ ++.|++||+. +++.. ..+. .|...+..++|+|+|++++.++. +++|.+|++. +++...... ....
T Consensus 165 -~-~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~--- 239 (365)
T 1jof_A 165 -T-ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI--- 239 (365)
T ss_dssp -T-TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS---
T ss_pred -C-CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC---
Confidence 2 5789999998 66643 2333 24567899999999998877764 7899999764 343221000 0000
Q ss_pred EEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCC------CceeEE-EcCCCCEEEEEcCC-C-----eEEEEE
Q 020021 168 AYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDIS------DANVVK-FSNDGRLMLLTTME-G-----HIHVLD 234 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~------~v~~v~-~s~dg~~l~~~~~d-g-----~i~i~d 234 (332)
+.+ ..++.. .+..++ |||||++++++..+ + .|.+|+
T Consensus 240 ---~~~----------------------------~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~ 288 (365)
T 1jof_A 240 ---PPG----------------------------IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFK 288 (365)
T ss_dssp ---CTT----------------------------CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEE
T ss_pred ---CCC----------------------------cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEE
Confidence 000 000100 256789 99999988766533 2 899999
Q ss_pred cc-CCeEeEEeeecCCCCCcceEEEECC---CCCEEEEEcCC-CcEEEEECCCC
Q 020021 235 SF-RGTLLSTYNVKPVSRNSTLEASFSP---EGMFVISGSGD-GSVYAWSVRSG 283 (332)
Q Consensus 235 ~~-~~~~~~~~~~~~~~~~~~~~v~~sp---dg~~l~sgs~D-g~i~vWd~~~~ 283 (332)
+. ++++.........+......++|+| ||++|++++.+ ++|++|++...
T Consensus 289 ~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 289 LRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 86 5665432111111222344689999 89999999865 89999998765
No 182
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=8.1e-14 Score=119.82 Aligned_cols=240 Identities=9% Similarity=0.014 Sum_probs=160.9
Q ss_pred cEEEEEECCCCCEEE-EEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceE
Q 020021 36 RISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~-tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~ 114 (332)
...+++++++|++++ +...++.|.+||..++........+...+..+++.+++. ++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~---~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF---NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET---TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC---CCEEEEEeCCCceEe
Confidence 678999999999888 557889999999765543222122223567788988877 444432 568999998765443
Q ss_pred EEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCC
Q 020021 115 RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEK 194 (332)
Q Consensus 115 ~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~ 194 (332)
.........+.++++.++++.+++...++.|.+|+..+......
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~------------------------------------ 144 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL------------------------------------ 144 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC------------------------------------
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee------------------------------------
Confidence 22223346789999999999888877788888887543211000
Q ss_pred CCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCc
Q 020021 195 GPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS 274 (332)
Q Consensus 195 ~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~ 274 (332)
..........++++++|+++++...++.|.+||........... .....+..++++|+|+.+++...++.
T Consensus 145 -------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~---~~~~~p~~i~~d~~g~l~v~~~~~~~ 214 (270)
T 1rwi_B 145 -------PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF---TDITAPWGIAVDEAGTVYVTEHNTNQ 214 (270)
T ss_dssp -------CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC---SSCCSEEEEEECTTCCEEEEETTTSC
T ss_pred -------ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc---cCCCCceEEEECCCCCEEEEECCCCc
Confidence 00011234678999999988888888999999987655432211 12245678999999988888888899
Q ss_pred EEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEeccccccc
Q 020021 275 VYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDLSKL 325 (332)
Q Consensus 275 i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~~~~~ 325 (332)
|++|+............+...+..++++|+++++++...+ +.++..+..++
T Consensus 215 v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 215 VVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred EEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 9999986644333222233457889999999988887655 77776655443
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=9.6e-13 Score=116.76 Aligned_cols=245 Identities=8% Similarity=0.051 Sum_probs=163.0
Q ss_pred ceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCC-CCCceeE
Q 020021 26 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-GWDESLR 104 (332)
Q Consensus 26 ~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-g~d~~v~ 104 (332)
....+.++...+.+++|+|+|++++++..++.|.+||..+++.......+...+..+++++++..++..... ...+.|.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 345567777788999999999988899999999999999887665443445568889999998755554321 0015799
Q ss_pred EEEccCCceEEEee--cccccEEEEEecCCCCeEEEeeC------CCcEEEEeCCCceEEEEEEe-cCceeEEEcCCCeE
Q 020021 105 LLSLHDNKYLRYFK--GHHDRVVSLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLRV-QGRPAAAYDDQGLV 175 (332)
Q Consensus 105 v~d~~~~~~~~~~~--~h~~~V~~v~~~~~~~~l~s~s~------Dg~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~ 175 (332)
+||.+++.....+. .+...+..+.+.|+++.+++... .+.|..+|..+++....... .......+++++..
T Consensus 116 ~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKV 195 (333)
T ss_dssp EECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSE
T ss_pred EEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCE
Confidence 99988876543333 34567999999999988887654 24566666655444332221 22334567777753
Q ss_pred E-EEE-eCCEEEEEECccCCCCCeeE------EEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeec
Q 020021 176 F-AVA-FGGYIRMFDARKYEKGPFDI------FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247 (332)
Q Consensus 176 ~-~~~-~~~~i~vwd~~~~~~~~~~~------~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 247 (332)
+ .+. .++.|.+||..... ..+.. ....++ .....++++++|+++++...++.|.+||. .++.+..+...
T Consensus 196 l~v~~~~~~~i~~~d~~~~g-~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~ 272 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDG-VTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIP 272 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTS-SSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECT
T ss_pred EEEEeCCCCeEEEEEecCCC-cCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcC
Confidence 3 333 36899999985311 11111 111111 24567999999999888888899999998 56666665432
Q ss_pred CC---CCCcceEEEECCCCCEEEEEcCCC
Q 020021 248 PV---SRNSTLEASFSPEGMFVISGSGDG 273 (332)
Q Consensus 248 ~~---~~~~~~~v~~spdg~~l~sgs~Dg 273 (332)
.. +...+..++|+||++.|+.++.++
T Consensus 273 ~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 273 GRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp TGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCccccccCcceEEECCCCCEEEEEeCcc
Confidence 11 112567899999987776665553
No 184
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.65 E-value=2.7e-13 Score=122.19 Aligned_cols=271 Identities=14% Similarity=0.106 Sum_probs=183.5
Q ss_pred cccceeEeccCCCcEEEEEECCCCCEEEEEe----------CCCcEEEEEcCCCeeeEEeeecc-------cceeEEEEc
Q 020021 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSKK-------YGVDLVCFT 85 (332)
Q Consensus 23 ~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs----------~D~tv~iwd~~~~~~~~~~~~~~-------~~v~~~~~~ 85 (332)
+.+...++..-..+ . +.++|||+++..++ .+++|.+||..+++.+.++.-.. .....+.|+
T Consensus 68 t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~s 145 (386)
T 3sjl_D 68 AGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLT 145 (386)
T ss_dssp TTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEEC
T ss_pred CCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEc
Confidence 45556666654555 3 99999999886665 46789999999999988875421 134568999
Q ss_pred cCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCC-ceEEEEEEec--
Q 020021 86 SHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLRVQ-- 162 (332)
Q Consensus 86 ~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~-~~~~~~~~~~-- 162 (332)
++++.++.+.. ..++.|.++|+.+++.+.++.--. . ...+....+.+++.+.||++.+.++.+ ++........
T Consensus 146 pDGk~lyVan~-~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~ 221 (386)
T 3sjl_D 146 PDGKTLLFYQF-SPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH 221 (386)
T ss_dssp TTSSEEEEEEC-SSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS
T ss_pred CCCCEEEEEEc-CCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceec
Confidence 99999887753 236789999999999888774321 1 122333456788889999999999876 5542211100
Q ss_pred -C-ce---eEEE-cCCCeEEEEEeCCEEEEEECccCCCCCeeEEEe--------cCCCCCceeEEEcCCCCEEEEEcC--
Q 020021 163 -G-RP---AAAY-DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSV--------GGDISDANVVKFSNDGRLMLLTTM-- 226 (332)
Q Consensus 163 -~-~~---~~~~-~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~--------~~~~~~v~~v~~s~dg~~l~~~~~-- 226 (332)
. .+ ...+ .+++.++.++.++.+.+.|+..........+.+ +-.......+++++++..+.....
T Consensus 222 ~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~ 301 (386)
T 3sjl_D 222 PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR 301 (386)
T ss_dssp CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred cccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccc
Confidence 0 01 1122 356666667778999999986432111111110 001223456888999877766542
Q ss_pred --------CCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCC-EEEEE-cCCCcEEEEECCCCceEEEecCCCCCC
Q 020021 227 --------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISG-SGDGSVYAWSVRSGKEVASWMSFDTEP 296 (332)
Q Consensus 227 --------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~-~l~sg-s~Dg~i~vWd~~~~~~~~~~~~~~~~v 296 (332)
.++|.++|+.+++.+.++... ..+..++|+||++ +|++. ..++.|.++|..+++.++++..- +..
T Consensus 302 ~~~~hk~~~~~V~viD~~t~kv~~~i~vg----~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p 376 (386)
T 3sjl_D 302 DEWRHKTASRFVVVLDAKTGERLAKFEMG----HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHG 376 (386)
T ss_dssp CTTCTTSCEEEEEEEETTTCCEEEEEEEE----EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSS
T ss_pred cccccCCCCCEEEEEECCCCeEEEEEECC----CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCC
Confidence 257999999999999887653 2556899999997 66664 56899999999999998887543 455
Q ss_pred ceEEeCCC
Q 020021 297 PVIKWTPG 304 (332)
Q Consensus 297 ~~l~~sp~ 304 (332)
+.|.+++|
T Consensus 377 ~~l~~s~d 384 (386)
T 3sjl_D 377 PQVITTAD 384 (386)
T ss_dssp CCEEEECC
T ss_pred ceeEECCc
Confidence 77888777
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.65 E-value=1.8e-13 Score=122.09 Aligned_cols=238 Identities=8% Similarity=0.072 Sum_probs=155.7
Q ss_pred CcEEEEEECCCCCEEEEEeCCC-----cEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCC------------
Q 020021 35 GRISSMDFHKSSSYLVTASDDE-----SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN------------ 97 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D~-----tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~------------ 97 (332)
..+..+.|||||++|+.++.+. .|.+||+.+++......... +..++|+|+++.+++++..
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 4678899999999998887653 37888888887765554433 8889999999998887531
Q ss_pred ------C------CCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCC-------cEEEEeCCCceEEEE
Q 020021 98 ------G------WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR-------TVLLWDQRAEKCQGL 158 (332)
Q Consensus 98 ------g------~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg-------~i~iWd~~~~~~~~~ 158 (332)
| ....+.+||+.+++.+..+.. . .+..+.|+|+| .+++++.+. ...+|.+.+++....
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l 213 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKM 213 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEE
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEe
Confidence 0 135789999998876455555 4 78899999999 888876652 345554445544333
Q ss_pred EEecCceeEEEcCCCe-EEEEEeC--------CEEEEEECccCCCCCeeEEEecCCCCCcee-EEEcCCCCEEEEEcCCC
Q 020021 159 LRVQGRPAAAYDDQGL-VFAVAFG--------GYIRMFDARKYEKGPFDIFSVGGDISDANV-VKFSNDGRLMLLTTMEG 228 (332)
Q Consensus 159 ~~~~~~~~~~~~~~~~-~~~~~~~--------~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~-v~~s~dg~~l~~~~~dg 228 (332)
... .....+++++. ++.++.+ ..|.+|| .. .... ...++...+.. +.|+ || ++++++.++
T Consensus 214 ~~~--~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~---~~~~-l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 214 FEK--VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GK---EVMG-ILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp EEE--ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SS---CEEE-SSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred ccC--cceeeECCCCCEEEEEEccccCCccccceEEEEC--CC---ceEe-ccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 222 22222256664 4444432 3677777 21 1111 11222344554 8899 98 888999999
Q ss_pred eEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcE-EEEECCCCceEEEecCCCCCC
Q 020021 229 HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSV-YAWSVRSGKEVASWMSFDTEP 296 (332)
Q Consensus 229 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i-~vWd~~~~~~~~~~~~~~~~v 296 (332)
.+++| +.+++...... +...+..++|+| ..+++++.++.. .||.+. ++ ...+..|+..+
T Consensus 284 ~~~l~-~~~g~~~~~~~----~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~~ 343 (347)
T 2gop_A 284 SVNLY-IWDGEIKPIAK----GRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDPI 343 (347)
T ss_dssp EEEEE-EESSSEEEEEC----SSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTSTT
T ss_pred cEEEE-EcCCceEEEec----CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHhH
Confidence 99999 77665433221 245677889999 777887777765 788776 54 55566666543
No 186
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.65 E-value=4.4e-14 Score=137.28 Aligned_cols=252 Identities=8% Similarity=0.043 Sum_probs=158.5
Q ss_pred eeEecc-----CCCcEEEEEECCCCCEEEEEeCC----------CcEEEEEcCC------CeeeEEee-ecccceeEEEE
Q 020021 27 GMSFRD-----YNGRISSMDFHKSSSYLVTASDD----------ESIRLYDVTA------ATCLKTIN-SKKYGVDLVCF 84 (332)
Q Consensus 27 ~~~l~~-----h~~~I~~i~~s~dg~~l~tgs~D----------~tv~iwd~~~------~~~~~~~~-~~~~~v~~~~~ 84 (332)
.+.+.. |...+.+++|||||++|+.++.| .+|.+||+.+ ++. ..+. .+...+..++|
T Consensus 117 ~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~ 195 (662)
T 3azo_A 117 PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRL 195 (662)
T ss_dssp CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEE
T ss_pred CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceE
Confidence 345555 77789999999999999999988 6899999988 554 3444 44455677899
Q ss_pred ccCCCEEEEecCCC----C-CceeEEEEcc-CC---ceEEEeecccccEEEEEecCCCCeEEEeeCCC--cEEEEeCCCc
Q 020021 85 TSHPTTVIYSSKNG----W-DESLRLLSLH-DN---KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR--TVLLWDQRAE 153 (332)
Q Consensus 85 ~~~~~~~~~~s~~g----~-d~~v~v~d~~-~~---~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg--~i~iWd~~~~ 153 (332)
+|+++.+++++... | ...|.+||+. ++ +......+|...+..+.|+|||+.+++++.|+ .|..||..++
T Consensus 196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATG 275 (662)
T ss_dssp CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTC
T ss_pred CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCC
Confidence 99999998876432 1 2579999998 56 44555556678999999999999888888888 4555555454
Q ss_pred eEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEE
Q 020021 154 KCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVL 233 (332)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~ 233 (332)
+........... ... . -...+..++|+|++++++++.. +.+++|
T Consensus 276 ~~~~l~~~~~~~---------------------------~~p---~-----w~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 276 AATQLCRREEEF---------------------------AGP---L-----WTPGMRWFAPLANGLIAVVHGK-GAAVLG 319 (662)
T ss_dssp CEEESSCCSSBS---------------------------SCC---C-----CSTTCCSEEECTTSCEEEEEBS-SSCEEE
T ss_pred ceeecccccccc---------------------------cCc---c-----ccccCceEeEeCCCEEEEEEEc-CccEEE
Confidence 432211100000 000 0 0012456899999999999988 988888
Q ss_pred --EccCCeEeEEeeecCCCCCcceEE-EECCCCCEEEEEcCCC--cEEEEECCCCceEEEecCCCCCCceEEeCCCeeEE
Q 020021 234 --DSFRGTLLSTYNVKPVSRNSTLEA-SFSPEGMFVISGSGDG--SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMF 308 (332)
Q Consensus 234 --d~~~~~~~~~~~~~~~~~~~~~~v-~~spdg~~l~sgs~Dg--~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 308 (332)
|..+++ +..+. .+...+..+ +++++.-++++++.+. .|++||+.+++.......+...+....+++.....
T Consensus 320 ~~d~~~~~-~~~l~---~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~ 395 (662)
T 3azo_A 320 ILDPESGE-LVDAA---GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYYPEPQIRT 395 (662)
T ss_dssp EEETTTTE-EEECC---SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEE
T ss_pred EEECCCCc-EEEec---CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccccCcceEEE
Confidence 655555 34443 223344444 4444333444556554 46666776766543333444444444555555544
Q ss_pred Eeccc--eEEEec
Q 020021 309 VTGSS--ELSFWI 319 (332)
Q Consensus 309 ~t~~~--d~~~w~ 319 (332)
..... .+..|.
T Consensus 396 ~~~~dg~~i~~~~ 408 (662)
T 3azo_A 396 FTAPDGREIHAHI 408 (662)
T ss_dssp EECTTSCEEEEEE
T ss_pred EEcCCCCEEEEEE
Confidence 44422 344444
No 187
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.64 E-value=5.4e-12 Score=114.29 Aligned_cols=258 Identities=11% Similarity=0.022 Sum_probs=170.2
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEe----------CCCcEEEEEcCCCeeeEEeeec-------ccceeEEEEcc
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSK-------KYGVDLVCFTS 86 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs----------~D~tv~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~ 86 (332)
.++...+..-..+ .+.|||||+++..+. .|.+|.+||..+++.+.++... ......+.++|
T Consensus 57 ~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp 134 (373)
T 2mad_H 57 GSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP 134 (373)
T ss_pred CeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC
Confidence 4445556544444 899999999988775 3788999999998888776532 11234688999
Q ss_pred CCCEEEEecCCCCCceeEEEEccCCceEEE-eecccccEEEEEecCCC-CeEEEeeCCCcEEEEeCCCceEEEEEE----
Q 020021 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLRY-FKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLR---- 160 (332)
Q Consensus 87 ~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~-~~~h~~~V~~v~~~~~~-~~l~s~s~Dg~i~iWd~~~~~~~~~~~---- 160 (332)
+++.++.++.. .++.|.++| ++++.+.. +.-. . ++.+.|++ +.+++.+.||++.++|. +++......
T Consensus 135 DG~~l~v~n~~-~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~ 207 (373)
T 2mad_H 135 NNADLLFFQFA-AGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAM 207 (373)
T ss_pred CCCEEEEEecC-CCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecccc
Confidence 99999887532 257899999 99887766 4321 1 23445554 46778889999999999 776553322
Q ss_pred -ecCce---eEEEc-CCCeEEEEEeCCEEEEEECccCCCCCeeEEEecC--------CCCCceeEEEcCCCCEEEEEcC-
Q 020021 161 -VQGRP---AAAYD-DQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG--------DISDANVVKFSNDGRLMLLTTM- 226 (332)
Q Consensus 161 -~~~~~---~~~~~-~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~--------~~~~v~~v~~s~dg~~l~~~~~- 226 (332)
....+ ...+. ..+.++.....+.+.+.|+..........+.+.. .......++++||++.+.+...
T Consensus 208 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~ 287 (373)
T 2mad_H 208 LTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSE 287 (373)
T ss_pred ccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEecc
Confidence 11111 01112 2344444556788888887543211111111100 1122344789999887666543
Q ss_pred ---------CCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCC-EEEEEc-CCCcEEEEECCCCceEEEecCCCC
Q 020021 227 ---------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGS-GDGSVYAWSVRSGKEVASWMSFDT 294 (332)
Q Consensus 227 ---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~-~l~sgs-~Dg~i~vWd~~~~~~~~~~~~~~~ 294 (332)
.+.|.++|..+++.+.++... .....++|+|||+ .++++. .++.|.++|+.+++.+..+.....
T Consensus 288 ~~~~~~~~~~~~V~VID~~t~~vv~~i~~g----~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~ 362 (373)
T 2mad_H 288 QSAWKLHAAAKEVTSVTGLVGQTSSQISLG----HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGS 362 (373)
T ss_pred CCcccccCCCCeEEEEECCCCEEEEEEECC----CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCC
Confidence 358999999999998877532 2456799999999 788877 589999999999998877433333
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.64 E-value=1.8e-12 Score=123.54 Aligned_cols=271 Identities=14% Similarity=0.140 Sum_probs=182.7
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEcc--CCceEEEeecc
Q 020021 43 HKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DNKYLRYFKGH 120 (332)
Q Consensus 43 s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~--~~~~~~~~~~h 120 (332)
+|.+.++++...|++|.++|..+++.+.++.... .+..+.|++++++++.++. |+.|.+||+. +++.+..+...
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~---dg~V~viD~~~~t~~~v~~i~~G 239 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGR---DGKVNMIDLWMKEPTTVAEIKIG 239 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEET---TSEEEEEETTSSSCCEEEEEECC
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcC---CCeEEEEECCCCCCcEeEEEecC
Confidence 4555677888899999999999999998886543 4568899999999887753 7799999995 77777777654
Q ss_pred cccEEEEEec----CCCCeEEEee-CCCcEEEEeCCCceEEEEEEecC-------------ceeEEEcCCC--eEEEEEe
Q 020021 121 HDRVVSLSLC----SSKDCFISGS-LDRTVLLWDQRAEKCQGLLRVQG-------------RPAAAYDDQG--LVFAVAF 180 (332)
Q Consensus 121 ~~~V~~v~~~----~~~~~l~s~s-~Dg~i~iWd~~~~~~~~~~~~~~-------------~~~~~~~~~~--~~~~~~~ 180 (332)
.. ...++|+ |||++++.++ .++++.++|..+.+.+..+.... ......++.+ .++....
T Consensus 240 ~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 240 SE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp SE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CC-CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 33 5789999 6999877665 56999999999888877665321 1122233332 2333334
Q ss_pred CCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEE-cCCCeEEEEEccCCeEeEEeee-cCC-CCCcceEE
Q 020021 181 GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNV-KPV-SRNSTLEA 257 (332)
Q Consensus 181 ~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~-~~dg~i~i~d~~~~~~~~~~~~-~~~-~~~~~~~v 257 (332)
+|.|.++|...... +...... .......+.|+|||++++++ ..+++|.++|..+++++..... ... |...-..
T Consensus 319 ~g~v~~vd~~~~~~--~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~- 394 (567)
T 1qks_A 319 TGKILLVDYTDLNN--LKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN- 394 (567)
T ss_dssp TTEEEEEETTCSSE--EEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-
T ss_pred CCeEEEEecCCCcc--ceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-
Confidence 58999999765321 1111111 11234567899999987665 4678999999999998877654 211 1111111
Q ss_pred EECCCCC-EEEEEc-CCCcEEEEECCC-------CceEEEecCCCCCCceEEeCCCeeEEEe-c--------cceEEEec
Q 020021 258 SFSPEGM-FVISGS-GDGSVYAWSVRS-------GKEVASWMSFDTEPPVIKWTPGSLMFVT-G--------SSELSFWI 319 (332)
Q Consensus 258 ~~spdg~-~l~sgs-~Dg~i~vWd~~~-------~~~~~~~~~~~~~v~~l~~sp~~~~l~t-~--------~~d~~~w~ 319 (332)
-++|++. .+++.. .+++|.++|..+ .+.+.++........-++.+|+++.+-. . +..+.+++
T Consensus 395 ~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 395 FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEE
Confidence 2688854 445553 468999999987 5567776655444455889999976544 3 12478877
Q ss_pred ccc
Q 020021 320 PDL 322 (332)
Q Consensus 320 ~~~ 322 (332)
.+.
T Consensus 475 ~~~ 477 (567)
T 1qks_A 475 IKA 477 (567)
T ss_dssp GGG
T ss_pred CCc
Confidence 653
No 189
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=3.1e-13 Score=117.38 Aligned_cols=201 Identities=12% Similarity=0.191 Sum_probs=143.3
Q ss_pred CCCcEEEEEE-CCCCCEEEEEeC-CCcEEEEEcCCCeeeEEeeec-ccceeEEEEccCCCEEEEecCCCCCceeEEEEcc
Q 020021 33 YNGRISSMDF-HKSSSYLVTASD-DESIRLYDVTAATCLKTINSK-KYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (332)
Q Consensus 33 h~~~I~~i~~-s~dg~~l~tgs~-D~tv~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~ 109 (332)
|...+.++++ ++++.++++... ++.|++|| .+++.+..+... ...+..+++.+++...++.. .++.|.+||..
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~---~~~~i~~~~~~ 150 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVEC---KVMRVIIFDQN 150 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEET---TTTEEEEECTT
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEEC---CCCEEEEEcCC
Confidence 4467889999 577877777644 89999999 567776666432 24577889999887444433 25789999964
Q ss_pred CCceEEEee--cccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEE
Q 020021 110 DNKYLRYFK--GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMF 187 (332)
Q Consensus 110 ~~~~~~~~~--~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vw 187 (332)
++.+..+. ++...+.+++++++++.+++.+.++.|++||.... ....+..
T Consensus 151 -g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~-------------------------- 202 (286)
T 1q7f_A 151 -GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-YLRQIGG-------------------------- 202 (286)
T ss_dssp -SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC-EEEEESC--------------------------
T ss_pred -CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC-EEEEEcc--------------------------
Confidence 55555554 45567899999999998888888999999997432 2111100
Q ss_pred ECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCC-eEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEE
Q 020021 188 DARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG-HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 266 (332)
Q Consensus 188 d~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l 266 (332)
.+.......++++++|+++++...++ .|.+||. .++.+..+.... ....+..++++|+|+.+
T Consensus 203 ---------------~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~~i~~~~~g~l~ 265 (286)
T 1q7f_A 203 ---------------EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV-KHAQCFDVALMDDGSVV 265 (286)
T ss_dssp ---------------TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS-CCSCEEEEEEETTTEEE
T ss_pred ---------------CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccC-CCCcceeEEECCCCcEE
Confidence 01112356789999999999988886 9999995 566666665432 22345689999999988
Q ss_pred EEEcCCCcEEEEECCCC
Q 020021 267 ISGSGDGSVYAWSVRSG 283 (332)
Q Consensus 267 ~sgs~Dg~i~vWd~~~~ 283 (332)
++ +.|++|++|++...
T Consensus 266 vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 266 LA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EE-ETTTEEEEEECSCC
T ss_pred EE-CCCCeEEEEEcccc
Confidence 87 57999999998653
No 190
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.62 E-value=1.4e-13 Score=122.57 Aligned_cols=207 Identities=9% Similarity=0.109 Sum_probs=146.5
Q ss_pred cCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCe-eeEEee---------ecccceeEEEEcc-CCCEEEEecCCCCC
Q 020021 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT-CLKTIN---------SKKYGVDLVCFTS-HPTTVIYSSKNGWD 100 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~~~~~s~~g~d 100 (332)
++-.....|+|+|+|+++++...++.|++||..... .+..+. .+-.....+++.+ ++...++.+ ..+
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~--~~~ 165 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG--YCN 165 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC--SSC
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC--CCC
Confidence 444678899999999999999999999999986542 445542 2223467899999 555444432 126
Q ss_pred ceeEEEEccCCceEEEee----------cccccEEEEEecCC-CCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEE
Q 020021 101 ESLRLLSLHDNKYLRYFK----------GHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAY 169 (332)
Q Consensus 101 ~~v~v~d~~~~~~~~~~~----------~h~~~V~~v~~~~~-~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~ 169 (332)
+.|++|| .+++.+..+. ++.....+++++|+ +..+++...++.|++||..+++....+....
T Consensus 166 ~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~------ 238 (329)
T 3fvz_A 166 SRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS------ 238 (329)
T ss_dssp CEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT------
T ss_pred CeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc------
Confidence 7899999 5667766664 23445899999998 7788888889999999988676554432111
Q ss_pred cCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcC------CCCEEEEEcCCCeEEEEEccCCeEeEE
Q 020021 170 DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN------DGRLMLLTTMEGHIHVLDSFRGTLLST 243 (332)
Q Consensus 170 ~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~------dg~~l~~~~~dg~i~i~d~~~~~~~~~ 243 (332)
....+..++++| +|+.+++...+.+|++||..+++.+..
T Consensus 239 -----------------------------------~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 239 -----------------------------------FGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp -----------------------------------TTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred -----------------------------------cCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 001223445555 444444445566999999999998877
Q ss_pred eeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 244 YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 244 ~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
+.....+...+..++++|||+.+++...++.|++|++..
T Consensus 284 ~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 284 FKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 643233445677899999999999999999999999853
No 191
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=2.3e-11 Score=105.64 Aligned_cols=275 Identities=8% Similarity=0.056 Sum_probs=185.0
Q ss_pred ccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeE-EeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEcc
Q 020021 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (332)
Q Consensus 31 ~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~ 109 (332)
......+.+|.++++|++.++...++.|.+||.. ++... .+......+..+++.+++...+... .++.|..+|..
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~---~~~~v~~~d~~ 91 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTEN---GANKIGKLSKK 91 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEET---TTTEEEEECTT
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEec---CCCeEEEECCC
Confidence 3445678999999999999888889999999988 55433 1222234577788888776444432 14678899887
Q ss_pred CCceEE-EeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec----CceeEEEcCCCeEEEEEe-CCE
Q 020021 110 DNKYLR-YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFAVAF-GGY 183 (332)
Q Consensus 110 ~~~~~~-~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~ 183 (332)
++... .+......+.++++.++++.+++...++.|..+|.. ++.. .+..+ ......+++++.++.+.. ++.
T Consensus 92 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 92 -GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp -SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred -CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence 55432 222244678999999999988888778899999987 5443 22222 122445666676655554 578
Q ss_pred EEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCC
Q 020021 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 263 (332)
Q Consensus 184 i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg 263 (332)
|..+|.. +.+..+...........++++++|.++++....+.|.++|. +++... +.. +.....+..++++++|
T Consensus 169 i~~~~~~----g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~-~~~~~~~~~i~~d~~g 241 (300)
T 2qc5_A 169 IGRITNT----GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDI-PTPNARPHAITAGKNS 241 (300)
T ss_dssp EEEECTT----CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EEC-SSTTCCEEEEEECSTT
T ss_pred EEEECCC----CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EEC-CCCCCCceEEEECCCC
Confidence 9999862 22333333233345778999999998888888889999998 555433 221 1233456789999999
Q ss_pred CEEEEEcCCCcEEEEECCCCceEEE-ecCCCCCCceEEeCCCeeEEEeccceEEEecc
Q 020021 264 MFVISGSGDGSVYAWSVRSGKEVAS-WMSFDTEPPVIKWTPGSLMFVTGSSELSFWIP 320 (332)
Q Consensus 264 ~~l~sgs~Dg~i~vWd~~~~~~~~~-~~~~~~~v~~l~~sp~~~~l~t~~~d~~~w~~ 320 (332)
+.+++...++.|..||. +++.... +......+..+++.|+|+++++....+..++|
T Consensus 242 ~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~i~~~~p 298 (300)
T 2qc5_A 242 EIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALKCKIGKLNL 298 (300)
T ss_dssp CEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECSSEEEEEEE
T ss_pred CEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEccCceEEeCC
Confidence 98887777889999998 4543322 23234568899999999888776533433443
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.62 E-value=2e-12 Score=113.53 Aligned_cols=244 Identities=8% Similarity=0.055 Sum_probs=159.2
Q ss_pred CCcEEEEEECCCCCEEEE-------EeCCCcEEEEEcCCCeeeEEee----ecccceeEEEEccCCCEEEEecCCCCCce
Q 020021 34 NGRISSMDFHKSSSYLVT-------ASDDESIRLYDVTAATCLKTIN----SKKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (332)
Q Consensus 34 ~~~I~~i~~s~dg~~l~t-------gs~D~tv~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~s~~g~d~~ 102 (332)
-....+++|+++|.++++ +..++.|.+||..+++...... .+...+..+++.+++..++++.. .+.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---~~~ 93 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---RLG 93 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---TTE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---CCC
Confidence 345678999999998888 6788999999988877543221 13345777888888334444432 336
Q ss_pred eEEEEccCCceEEE-eec----ccccEEEEEecCCCCeEEEeeCC---------------CcEEEEeCCCceEEEEEEec
Q 020021 103 LRLLSLHDNKYLRY-FKG----HHDRVVSLSLCSSKDCFISGSLD---------------RTVLLWDQRAEKCQGLLRVQ 162 (332)
Q Consensus 103 v~v~d~~~~~~~~~-~~~----h~~~V~~v~~~~~~~~l~s~s~D---------------g~i~iWd~~~~~~~~~~~~~ 162 (332)
+.+||.+ ++.... ... +...+..+++.++++..++...+ +.|..||.. ++.....
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~--- 168 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD--- 168 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE---
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec---
Confidence 8899988 665433 221 12457899999999887776654 334444432 2111000
Q ss_pred CceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEc----CCCCE-EEEEcCCCeEEEEEcc-
Q 020021 163 GRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFS----NDGRL-MLLTTMEGHIHVLDSF- 236 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s----~dg~~-l~~~~~dg~i~i~d~~- 236 (332)
. .....+.++++ |+|+. +++...++.|.+||..
T Consensus 169 --------------------------------------~---~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~ 207 (314)
T 1pjx_A 169 --------------------------------------T---AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKG 207 (314)
T ss_dssp --------------------------------------E---EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEE
T ss_pred --------------------------------------c---CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCC
Confidence 0 00123567888 99965 4555678999999976
Q ss_pred CCeEeE--EeeecCCCC-CcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCee-EEEecc
Q 020021 237 RGTLLS--TYNVKPVSR-NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGS 312 (332)
Q Consensus 237 ~~~~~~--~~~~~~~~~-~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~t~~ 312 (332)
.++... .+.....+. .....++++++|+++++...++.|.+||..+++.+..+..+...+.+++|+|+++ ++++..
T Consensus 208 ~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 287 (314)
T 1pjx_A 208 PAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp TTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred CCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeC
Confidence 454321 111111222 3456789999999999888889999999987777666665656789999999998 666655
Q ss_pred c--eEEEecccccccc
Q 020021 313 S--ELSFWIPDLSKLG 326 (332)
Q Consensus 313 ~--d~~~w~~~~~~~~ 326 (332)
. .+..++++..++.
T Consensus 288 ~~~~l~~~~~~~~g~~ 303 (314)
T 1pjx_A 288 ENNAVWKFEWQRNGKK 303 (314)
T ss_dssp TTTEEEEEECSSCBCC
T ss_pred CCCeEEEEeCCCCCcc
Confidence 5 5777777654444
No 193
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.62 E-value=6.3e-12 Score=113.89 Aligned_cols=276 Identities=7% Similarity=-0.086 Sum_probs=177.0
Q ss_pred ECCCCCEEEEEeC--CC---cEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCC-------CCCceeEEEEcc
Q 020021 42 FHKSSSYLVTASD--DE---SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSLH 109 (332)
Q Consensus 42 ~s~dg~~l~tgs~--D~---tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-------g~d~~v~v~d~~ 109 (332)
..|+++++..... +. +|.+||..+++.+.++.....+ .++++|+++.++.+... ..++.|.++|..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 4577777665543 22 8999999999988887754433 78999999998887521 135789999999
Q ss_pred CCceEEEeecc-------cccEEEEEecCCCCeEEEeeC--CCcEEEEeCCCceEEEE-EEecCceeEEEcCCCeEEEEE
Q 020021 110 DNKYLRYFKGH-------HDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGL-LRVQGRPAAAYDDQGLVFAVA 179 (332)
Q Consensus 110 ~~~~~~~~~~h-------~~~V~~v~~~~~~~~l~s~s~--Dg~i~iWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 179 (332)
+.+.+..+.-- ...-..+.|+|||++|+.+.. +..|.++| .+++.... +..+............+++..
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 184 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLC 184 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEc
Confidence 88776655321 123457899999999988874 47899999 99887766 544332212222233455556
Q ss_pred eCCEEEEEECccCCCCCeeEEEe----cCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCe--EeEEeeecCC----
Q 020021 180 FGGYIRMFDARKYEKGPFDIFSV----GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNVKPV---- 249 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~~~~~~~----~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~---- 249 (332)
.++.+.++|. ..+. ...... .+...-.....+++++..++..+.++.+.++|...+. .+..+.....
T Consensus 185 ~dg~~~~vd~-~g~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~ 261 (373)
T 2mad_H 185 AQGGLAKTDH-AGGA--AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKA 261 (373)
T ss_pred CCCCEEEEEC-CCcE--EEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccc
Confidence 6888999988 4321 101000 0110001223566776655555578899999986543 2333321100
Q ss_pred ---CCCcceEEEECCCCCEEEEEcC----------CCcEEEEECCCCceEEEecCCCCCCceEEeCCCee-EEEecc---
Q 020021 250 ---SRNSTLEASFSPEGMFVISGSG----------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGS--- 312 (332)
Q Consensus 250 ---~~~~~~~v~~spdg~~l~sgs~----------Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~t~~--- 312 (332)
.......++++||++.++.+.. ++.|.+.|..+++.+..+. .......++|+||++ ++.++.
T Consensus 262 ~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 262 DTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGT 340 (373)
T ss_pred cceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCC
Confidence 0111223789999988877643 3579999999999888874 344689999999998 565543
Q ss_pred ceEEEecccccc
Q 020021 313 SELSFWIPDLSK 324 (332)
Q Consensus 313 ~d~~~w~~~~~~ 324 (332)
.++.+++....+
T Consensus 341 ~~V~ViD~~t~~ 352 (373)
T 2mad_H 341 EVLHIYDAGAGD 352 (373)
T ss_pred CeEEEEECCCCC
Confidence 347777765433
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.61 E-value=5.2e-12 Score=120.33 Aligned_cols=293 Identities=11% Similarity=0.093 Sum_probs=193.5
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcC--CCeeeEEeeecccceeEEEEc----cCCCEEEEecCC
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFT----SHPTTVIYSSKN 97 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~s~~ 97 (332)
.+...++.... .+..+.|+|||+++.+++.|+.|.+||+. +++.+.++..... ...++|+ |+++.++.++.
T Consensus 187 ~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~- 263 (567)
T 1qks_A 187 YEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAY- 263 (567)
T ss_dssp CCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEE-
T ss_pred CeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEc-
Confidence 34455554333 45689999999999999999999999996 7888877765433 4578899 69998887753
Q ss_pred CCCceeEEEEccCCceEEEeec----------ccc-cEEEEEecCCCC-eEEEeeCCCcEEEEeCCCceEEEEEEec---
Q 020021 98 GWDESLRLLSLHDNKYLRYFKG----------HHD-RVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQ--- 162 (332)
Q Consensus 98 g~d~~v~v~d~~~~~~~~~~~~----------h~~-~V~~v~~~~~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~~~--- 162 (332)
+++++.++|..+.+.++.+.- |.. .+..+.+++++. .+++...+|.|.++|....+........
T Consensus 264 -~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~ 342 (567)
T 1qks_A 264 -WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAER 342 (567)
T ss_dssp -ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCS
T ss_pred -cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccc
Confidence 478999999999888876542 223 678888888755 5566677899999998765433222211
Q ss_pred CceeEEEcCCCeEEEEEe--CCEEEEEECccCCCCCeeEEEe-cCCCCCceeEE-EcCC-CCEEEEEc-CCCeEEEEEcc
Q 020021 163 GRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPFDIFSV-GGDISDANVVK-FSND-GRLMLLTT-MEGHIHVLDSF 236 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~--~~~i~vwd~~~~~~~~~~~~~~-~~~~~~v~~v~-~s~d-g~~l~~~~-~dg~i~i~d~~ 236 (332)
......+++++.++.++. ++.|.++|+.+.+. .....+ +...-.-.... ++|+ |.+++++. .++.|.++|..
T Consensus 343 ~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl--~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 343 FLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL--VAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp SEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred cccCceECCCCCEEEEEeCCCCeEEEEECCCCcE--EEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCC
Confidence 122456778887666554 58999999976431 222333 21111112233 5787 45555554 46899999988
Q ss_pred C-------CeEeEEeeecCCCCCcceEEEECCCCCEEEEEcC-------CCcEEEEECCCC-----ce-EEEec------
Q 020021 237 R-------GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG-------DGSVYAWSVRSG-----KE-VASWM------ 290 (332)
Q Consensus 237 ~-------~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~-------Dg~i~vWd~~~~-----~~-~~~~~------ 290 (332)
. .+.+.++.... .....+..+||+++|..... ..+|.|+|+.+. .. +..+.
T Consensus 421 ~~~~~~~~~kvv~~i~~~g---~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~ 497 (567)
T 1qks_A 421 PEGHPDNAWKILDSFPALG---GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAG 497 (567)
T ss_dssp TTTCTTTBTSEEEEEECSC---SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHT
T ss_pred CCCCccccCEEEEEEecCC---CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccc
Confidence 7 55666665322 22234778999999988653 359999999876 21 12221
Q ss_pred --CCCCCCceEEeCCCeeEE-Eec------cceEEEeccccccc
Q 020021 291 --SFDTEPPVIKWTPGSLMF-VTG------SSELSFWIPDLSKL 325 (332)
Q Consensus 291 --~~~~~v~~l~~sp~~~~l-~t~------~~d~~~w~~~~~~~ 325 (332)
.-...+.++.|+|+|+.+ ++. ++.+.+.+....+|
T Consensus 498 ~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~ 541 (567)
T 1qks_A 498 ITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLEL 541 (567)
T ss_dssp CCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred cCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceE
Confidence 113467889999999754 442 34477776655443
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.59 E-value=7.9e-13 Score=129.82 Aligned_cols=272 Identities=8% Similarity=0.000 Sum_probs=170.7
Q ss_pred CCCCEEEEEeCCC-c--EEEEEc--CCCeeeEEee------ecccceeEEEEccCCCEEEEecCC-CCC-ceeEEEEccC
Q 020021 44 KSSSYLVTASDDE-S--IRLYDV--TAATCLKTIN------SKKYGVDLVCFTSHPTTVIYSSKN-GWD-ESLRLLSLHD 110 (332)
Q Consensus 44 ~dg~~l~tgs~D~-t--v~iwd~--~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~s~~-g~d-~~v~v~d~~~ 110 (332)
|+|++++-...++ . -.||-. ..++....+. .+...+...+|+|+++.+++++.. |.+ .+|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8898876555432 1 145543 3343221111 122346778999999999887642 211 3899999999
Q ss_pred CceEEEeecccccEEEEEecCCCCeEEEeeCCCc----------------EEEEeCCCceEE--EEEEecC----ceeEE
Q 020021 111 NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRT----------------VLLWDQRAEKCQ--GLLRVQG----RPAAA 168 (332)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~----------------i~iWd~~~~~~~--~~~~~~~----~~~~~ 168 (332)
++.+.....+. .+..++|+|||+.|+.++.|+. |.+|++.++... ..+.... .....
T Consensus 161 g~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 161 AKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 98765433232 3667999999999999988876 999999876532 1222211 22456
Q ss_pred EcCCCeEEEEE-e-----CCEEEEEECcc------CCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCC----CeEEE
Q 020021 169 YDDQGLVFAVA-F-----GGYIRMFDARK------YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME----GHIHV 232 (332)
Q Consensus 169 ~~~~~~~~~~~-~-----~~~i~vwd~~~------~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~d----g~i~i 232 (332)
+++++..++.. . +..|.+||+.. ... ....+. .+...+. ..++|+|+.++..+.. +.|.+
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~--~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~ 315 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KWVKLI--DNFEGEY-DYVTNEGTVFTFKTNRHSPNYRLIN 315 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEE--CSSSSCE-EEEEEETTEEEEEECTTCTTCEEEE
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-ceEEee--CCCCcEE-EEEeccCCEEEEEECCCCCCCEEEE
Confidence 77877654433 3 46899999875 211 122222 2222333 3588999887766553 36999
Q ss_pred EEccCCeE--eEEeeecCCCC-CcceEEEECCCCCEEEEEcCCC--cEEEEECCCCceEEEecCCCCCCceEEeCCCeeE
Q 020021 233 LDSFRGTL--LSTYNVKPVSR-NSTLEASFSPEGMFVISGSGDG--SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLM 307 (332)
Q Consensus 233 ~d~~~~~~--~~~~~~~~~~~-~~~~~v~~spdg~~l~sgs~Dg--~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~ 307 (332)
||+.++.. ...+. +... ..+..++|++++.++++...|+ .|++|++.+++.+..+..+...+..++++|++..
T Consensus 316 ~d~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~ 393 (710)
T 2xdw_A 316 IDFTDPEESKWKVLV--PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTE 393 (710)
T ss_dssp EETTSCCGGGCEEEE--CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSE
T ss_pred EeCCCCCcccceecc--CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCE
Confidence 99887641 12222 1112 2455688888889999999998 4666787678777777766667788999998854
Q ss_pred E-Eeccc-----eEEEecccc
Q 020021 308 F-VTGSS-----ELSFWIPDL 322 (332)
Q Consensus 308 l-~t~~~-----d~~~w~~~~ 322 (332)
+ ++.++ .+..|+...
T Consensus 394 l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 394 IFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp EEEEEECSSCCCEEEEEETTS
T ss_pred EEEEEeCCCCCCEEEEEECCC
Confidence 4 33332 255565543
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.59 E-value=2.7e-13 Score=133.73 Aligned_cols=245 Identities=14% Similarity=0.039 Sum_probs=154.8
Q ss_pred CCCcEEEEEECCCCCEEEEEeCC-----CcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCC--------
Q 020021 33 YNGRISSMDFHKSSSYLVTASDD-----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW-------- 99 (332)
Q Consensus 33 h~~~I~~i~~s~dg~~l~tgs~D-----~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~-------- 99 (332)
|+..+.+++|||||++||.++.+ .+|++||+.+++.+... .+...+..++|+|+ +.+++++...-
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44578899999999999887665 46999999999876532 12222356789999 88888764321
Q ss_pred ---CceeEEEEccCCce--EEEee--cccccEEEEEecCCCCeEEEeeCCC-----cEEEEeCCCc--eEEEEEEecC--
Q 020021 100 ---DESLRLLSLHDNKY--LRYFK--GHHDRVVSLSLCSSKDCFISGSLDR-----TVLLWDQRAE--KCQGLLRVQG-- 163 (332)
Q Consensus 100 ---d~~v~v~d~~~~~~--~~~~~--~h~~~V~~v~~~~~~~~l~s~s~Dg-----~i~iWd~~~~--~~~~~~~~~~-- 163 (332)
...|++|++.++.. ...+. .|...+..+.|+|||++|+..+.++ .|.+||+.++ .+...+....
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 33588999877652 23333 3444688999999999888877654 7999998766 3122222211
Q ss_pred ceeEEEcCCCeEEEEEe----CCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEcc-CC
Q 020021 164 RPAAAYDDQGLVFAVAF----GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF-RG 238 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~----~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~-~~ 238 (332)
........+..++..+. ...|.+||+.... .....+. ..+...+..+.++ ++.++++...++..++|... .+
T Consensus 319 ~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~-~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g 395 (741)
T 1yr2_A 319 QWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVV-PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG 395 (741)
T ss_dssp CEEEEEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEE-CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS
T ss_pred eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEe-cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence 11222223344444443 2469999976532 1112111 2222334556676 66778888888877766543 35
Q ss_pred eEeEEeeecCCCCCcceEEEECCCCCEEE----EEcCCCcEEEEECCCCc
Q 020021 239 TLLSTYNVKPVSRNSTLEASFSPEGMFVI----SGSGDGSVYAWSVRSGK 284 (332)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~v~~spdg~~l~----sgs~Dg~i~vWd~~~~~ 284 (332)
.....+... ....+..++++||++.|+ +....++|++||+.+++
T Consensus 396 ~~~~~l~~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 396 KPAGAVSLP--GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp CEEEECBCS--SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CceeeccCC--CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 544444321 234566788999998666 33456799999998876
No 197
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.58 E-value=4.4e-12 Score=112.82 Aligned_cols=243 Identities=12% Similarity=0.145 Sum_probs=166.0
Q ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceE
Q 020021 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~ 114 (332)
.....+.++ ++.++++...+++|.+||..+++.+.++.. ......+++++++ .++.+. ..++.|.++|.++++..
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g-~lyv~~--~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDE-KAYVTQ--IWDYRIFIINPKTYEIT 118 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETT-EEEEEE--BSCSEEEEEETTTTEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCC-eEEEEE--CCCCeEEEEECCCCeEE
Confidence 345677775 355667777789999999999999888853 3446778888887 555553 23789999999998877
Q ss_pred EEeeccc-----ccEEEEEecCCCCeEEEee-CCCcEEEEeCCCceEEEEEEecCc-eeEEEcCCCeEEEEEeC------
Q 020021 115 RYFKGHH-----DRVVSLSLCSSKDCFISGS-LDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGLVFAVAFG------ 181 (332)
Q Consensus 115 ~~~~~h~-----~~V~~v~~~~~~~~l~s~s-~Dg~i~iWd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------ 181 (332)
..+.... .....+++ .+++.+++.. .+++|.++|.++++....+..... ....+++++.++.+..+
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred EEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCc
Confidence 6665332 14456666 3444444443 489999999999887777665433 34566777776666543
Q ss_pred -----CEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceE
Q 020021 182 -----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 256 (332)
Q Consensus 182 -----~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
+.|.++|....+. ...+.... ......++++||++.+.++.. .|.+||..+++....... .........
T Consensus 198 ~~~~~~~v~~id~~t~~v--~~~~~~~~-g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~-~~~~~~p~g 271 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTV--EKQFKFKL-GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFL-EFRDTKYYG 271 (328)
T ss_dssp SCBCCCEEEEEETTTTEE--EEEEECCT-TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSB-CCCSSCEEE
T ss_pred cccCCceEEEEECCCCeE--EEEEecCC-CCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeee-cCCCCceEE
Confidence 6899999865321 11222211 124688999999988877655 999999988775321111 111245667
Q ss_pred EEECC-CCCEEEEE----cCCCcEEEEECCCCceEEEec
Q 020021 257 ASFSP-EGMFVISG----SGDGSVYAWSVRSGKEVASWM 290 (332)
Q Consensus 257 v~~sp-dg~~l~sg----s~Dg~i~vWd~~~~~~~~~~~ 290 (332)
++++| +++.+++. ..+++|.+||.. ++.+.++.
T Consensus 272 i~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 272 LTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp EEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred EEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 99999 56666666 678999999997 88877764
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=2.4e-12 Score=112.42 Aligned_cols=213 Identities=15% Similarity=0.144 Sum_probs=147.3
Q ss_pred eeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEE
Q 020021 68 CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147 (332)
Q Consensus 68 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~i 147 (332)
.+..+..+......++|.+++..+++... .++.|..||..++ ...+..+...+.+++++++++.+++...++.|.+
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~--~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDV--RQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEG--GGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeC--CCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 33444444445677899999985555432 2678999999887 6667778888999999999998888888899999
Q ss_pred EeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEE---
Q 020021 148 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT--- 224 (332)
Q Consensus 148 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~--- 224 (332)
||..+++........ .+ .....++.++++|+|+++++.
T Consensus 95 ~d~~~g~~~~~~~~~------------------~~---------------------~~~~~~~~i~~d~~G~l~vtd~~~ 135 (296)
T 3e5z_A 95 QREPGGEWESIADSF------------------EG---------------------KKLNSPNDVCLAPDGSLWFSDPTY 135 (296)
T ss_dssp ECSTTCCEEEEECEE------------------TT---------------------EECCCCCCEEECTTSCEEEEECSH
T ss_pred EcCCCCcEEEEeecc------------------CC---------------------CCCCCCCCEEECCCCCEEEECCcc
Confidence 998776543211100 00 001235678999999988873
Q ss_pred -c-------------CCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECC-CCce---E
Q 020021 225 -T-------------MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR-SGKE---V 286 (332)
Q Consensus 225 -~-------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~-~~~~---~ 286 (332)
+ ..+.|..+|.. ++... +. ........++|+|||+.|++.+.++.|++|++. +++. .
T Consensus 136 g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~---~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~ 210 (296)
T 3e5z_A 136 GIDKPEEGYGGEMELPGRWVFRLAPD-GTLSA-PI---RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQG 210 (296)
T ss_dssp HHHCGGGSSCCCCCSSSCEEEEECTT-SCEEE-EE---CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEE
T ss_pred ccccccccccccccCCCcEEEEECCC-CCEEE-ee---cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCC
Confidence 3 13567777765 44332 21 123345679999999999888888999999996 4543 2
Q ss_pred EEecCCCCCCceEEeCCCeeEEEeccceEEEecccccccccc
Q 020021 287 ASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSKLGAY 328 (332)
Q Consensus 287 ~~~~~~~~~v~~l~~sp~~~~l~t~~~d~~~w~~~~~~~~~~ 328 (332)
..+..+...+..++++++|+++++....+.+|+++.+.+..+
T Consensus 211 ~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 211 VHFTVEPGKTDGLRVDAGGLIWASAGDGVHVLTPDGDELGRV 252 (296)
T ss_dssp EEECCSSSCCCSEEEBTTSCEEEEETTEEEEECTTSCEEEEE
T ss_pred eEeeCCCCCCCeEEECCCCCEEEEcCCeEEEECCCCCEEEEE
Confidence 333334556788999999998888766699999886555544
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.55 E-value=1.2e-11 Score=113.53 Aligned_cols=241 Identities=10% Similarity=0.064 Sum_probs=159.4
Q ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceE
Q 020021 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~ 114 (332)
.....|+|+++++++++...++.|++||..++.......... ... +++.+++..++++...+ ...|.+++...+...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~-~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEG-THTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSST-TCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCC-CceEEEEEcCCCcee
Confidence 357799999999988888888999999999887765544432 234 89999998887775422 227888887765544
Q ss_pred EEe----ecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECc
Q 020021 115 RYF----KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDAR 190 (332)
Q Consensus 115 ~~~----~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~ 190 (332)
..+ ..+...+.+++++|++..|..+..++.|..||..++... .+.... .
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~----------------~---------- 260 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLE----------------L---------- 260 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-EEEECC----------------C----------
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-EEeccc----------------c----------
Confidence 444 224456788999995444555667889999998765421 110000 0
Q ss_pred cCCCCCeeEEEecCCCCCceeEEEcC-CCCEEEEEcCCCeEEEEEccCCeEeEEeeecC---C---------CCCcceEE
Q 020021 191 KYEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP---V---------SRNSTLEA 257 (332)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~---------~~~~~~~v 257 (332)
.+. .+ ..+.+.++|+| ++.++++...++.|+.||... .. ..+.... . .-.....+
T Consensus 261 ---~g~------~~-~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g-~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gi 328 (409)
T 3hrp_A 261 ---SGS------LG-TNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG-EC-EWFCGSATQKTVQDGLREEALFAQPNGM 328 (409)
T ss_dssp ---CSC------CC-CSSCCEEEEETTTTEEEEEETTTTEEEEECTTC-CE-EEEEECTTCCSCBCEEGGGCBCSSEEEE
T ss_pred ---cCC------CC-CCccccEEEeCCCCEEEEEeCCCCEEEEEecCC-CE-EEEEeCCCCCCcCCCcccccEeCCCeEE
Confidence 000 00 00112789999 577888888889999998753 32 2222111 0 01335679
Q ss_pred EECCCCCEEEEEc-CCCcEEEEECCCCceEEEecCC---------------CCCCceEEeCCCeeEEEeccceEEEe
Q 020021 258 SFSPEGMFVISGS-GDGSVYAWSVRSGKEVASWMSF---------------DTEPPVIKWTPGSLMFVTGSSELSFW 318 (332)
Q Consensus 258 ~~spdg~~l~sgs-~Dg~i~vWd~~~~~~~~~~~~~---------------~~~v~~l~~sp~~~~l~t~~~d~~~w 318 (332)
+++|+|+++++-+ .++.|+.|++.+++ +.++..+ -..+..|+++|++.++++....-+++
T Consensus 329 a~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir 404 (409)
T 3hrp_A 329 TVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIR 404 (409)
T ss_dssp EECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEE
T ss_pred EEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEE
Confidence 9999999888888 89999999987775 4444333 12467899999998888876654433
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=4.8e-11 Score=104.44 Aligned_cols=234 Identities=12% Similarity=0.104 Sum_probs=151.1
Q ss_pred eEeccCCCcEEEEEECCC-CCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEE
Q 020021 28 MSFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (332)
Q Consensus 28 ~~l~~h~~~I~~i~~s~d-g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~ 106 (332)
..+..+..--.+..|+|+ +.++++...+++|..||..+++.. .+. ....+..+++.+++..++ +. +..|.+|
T Consensus 6 ~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v-~~----~~~l~~~ 78 (297)
T 3g4e_A 6 CVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVA-TI----GTKFCAL 78 (297)
T ss_dssp EEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEE-EE----TTEEEEE
T ss_pred EEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEE-EE----CCeEEEE
Confidence 334555556678889985 456777778899999999887652 232 234577889999998443 33 3578999
Q ss_pred EccCCceEEEeec----ccccEEEEEecCCCCeEEEeeCCC---------cEEEEeCCCceEEEEEEecCceeEEEcCCC
Q 020021 107 SLHDNKYLRYFKG----HHDRVVSLSLCSSKDCFISGSLDR---------TVLLWDQRAEKCQGLLRVQGRPAAAYDDQG 173 (332)
Q Consensus 107 d~~~~~~~~~~~~----h~~~V~~v~~~~~~~~l~s~s~Dg---------~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~ 173 (332)
|.++++....... ....++.+.+.|+|++.++...+. .-.+|.+... +
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-------------------g 139 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-------------------H 139 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-------------------S
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-------------------C
Confidence 9988765333221 234578899999998666543221 1222222111 0
Q ss_pred eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEE-EEEcCCCeEEEEEc--cCCeEeE--EeeecC
Q 020021 174 LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLM-LLTTMEGHIHVLDS--FRGTLLS--TYNVKP 248 (332)
Q Consensus 174 ~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l-~~~~~dg~i~i~d~--~~~~~~~--~~~~~~ 248 (332)
.+. .+.+ .....+.++|+|||+.+ ++.+.++.|.+||. .+|.+.. .+....
T Consensus 140 ~~~--------~~~~----------------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~ 195 (297)
T 3g4e_A 140 HVK--------KYFD----------------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE 195 (297)
T ss_dssp CEE--------EEEE----------------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC
T ss_pred CEE--------EEee----------------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC
Confidence 000 0000 01124678999999855 56677899999987 4555421 121111
Q ss_pred CCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeC-CCee-EEEec
Q 020021 249 VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWT-PGSL-MFVTG 311 (332)
Q Consensus 249 ~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~s-p~~~-~l~t~ 311 (332)
........++++++|+++++...++.|.+||..+++.+..+......+++++|. ||++ +++|.
T Consensus 196 ~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 196 KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 112345578999999988888888899999998899888877666678999998 8765 44554
No 201
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.51 E-value=6.5e-12 Score=115.05 Aligned_cols=271 Identities=11% Similarity=0.064 Sum_probs=175.0
Q ss_pred hcccceeEeccCCCcEEEEEECCCCCEEEEEe----------CCCcEEEEEcCCCeeeEEeeec-------ccceeEEEE
Q 020021 22 QSMEVGMSFRDYNGRISSMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSK-------KYGVDLVCF 84 (332)
Q Consensus 22 ~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs----------~D~tv~iwd~~~~~~~~~~~~~-------~~~v~~~~~ 84 (332)
.+.+...++.--..+ .+.++|||++|..+. .+++|.++|..+++.+.++.-. ......+.+
T Consensus 107 ~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~ 184 (426)
T 3c75_H 107 STGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNAL 184 (426)
T ss_dssp TTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEE
T ss_pred CCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEE
Confidence 345556666544455 899999999887765 4679999999999998887542 122346789
Q ss_pred ccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCC-CCeEEEeeCCCcEEEEeCCCceEEEE----E
Q 020021 85 TSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGL----L 159 (332)
Q Consensus 85 ~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~-~~~l~s~s~Dg~i~iWd~~~~~~~~~----~ 159 (332)
+++++.++.+.. ..++.|.+.|+.+++.+..+.--.. ....|+ .+.+++.+.||++.+.+..+++.... +
T Consensus 185 spDGk~lyV~n~-~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~ 259 (426)
T 3c75_H 185 TPDNKNLLFYQF-SPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVF 259 (426)
T ss_dssp CTTSSEEEEEEC-SSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCC
T ss_pred cCCCCEEEEEec-CCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeee
Confidence 999999888753 1257899999999988777653111 223343 35667778888888878755544321 1
Q ss_pred EecCce---eEEEcCC-CeEEEEEeCCEEEEEECccCCCCCeeEEEecC--------CCCCceeEEEcCCCCEEEEEcC-
Q 020021 160 RVQGRP---AAAYDDQ-GLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG--------DISDANVVKFSNDGRLMLLTTM- 226 (332)
Q Consensus 160 ~~~~~~---~~~~~~~-~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~--------~~~~v~~v~~s~dg~~l~~~~~- 226 (332)
.....+ ...+.++ +.++.....+.+.+.|...........+.+.. .......++++|||+.+.+...
T Consensus 260 ~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~ 339 (426)
T 3c75_H 260 HTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQ 339 (426)
T ss_dssp SCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEE
T ss_pred ccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecc
Confidence 111111 1223343 34555556788888887532110001111100 0112234789999876655432
Q ss_pred ---------CCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCC-EEEEEc-CCCcEEEEECCCCceEEEecCCCCC
Q 020021 227 ---------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGS-GDGSVYAWSVRSGKEVASWMSFDTE 295 (332)
Q Consensus 227 ---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~-~l~sgs-~Dg~i~vWd~~~~~~~~~~~~~~~~ 295 (332)
.+.|.++|..+.+.+.++... .....++|+|||+ ++++.. .++.|.|+|+.+++.+.++......
T Consensus 340 ~~~gthk~~s~~VsVID~~T~kvv~~I~vg----~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~ 415 (426)
T 3c75_H 340 RDEWKHKAASRFVVVLNAETGERINKIELG----HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRG 415 (426)
T ss_dssp CCTTCTTSCEEEEEEEETTTCCEEEEEEEE----EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSS
T ss_pred cccccccCCCCEEEEEECCCCeEEEEEECC----CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCC
Confidence 357999999999999887643 2356799999999 888887 5999999999999998887333322
Q ss_pred CceEEeCCC
Q 020021 296 PPVIKWTPG 304 (332)
Q Consensus 296 v~~l~~sp~ 304 (332)
+.+..+||
T Consensus 416 -P~~i~~~~ 423 (426)
T 3c75_H 416 -PQIITTHD 423 (426)
T ss_dssp -CCEEECCC
T ss_pred -CcEEEcCC
Confidence 33555665
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.50 E-value=1.6e-11 Score=110.74 Aligned_cols=277 Identities=10% Similarity=0.013 Sum_probs=182.2
Q ss_pred EECCCCCEEEEEeC-----CCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCC-------CCCceeEEEEc
Q 020021 41 DFHKSSSYLVTASD-----DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSL 108 (332)
Q Consensus 41 ~~s~dg~~l~tgs~-----D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-------g~d~~v~v~d~ 108 (332)
...|+++.+..... +++|.+.|..+++.+.++.....+ . +.++|+++.++.++.. ..++.|.+||.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34689988766654 689999999999999998765554 4 8999999988776420 12567999999
Q ss_pred cCCceEEEeeccc-------ccEEEEEecCCCCeEEEeeC--CCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEE
Q 020021 109 HDNKYLRYFKGHH-------DRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVA 179 (332)
Q Consensus 109 ~~~~~~~~~~~h~-------~~V~~v~~~~~~~~l~s~s~--Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (332)
.+.+.+..+.-.. ..-..+.|+|||++++.+.. +++|.++|..+++....+..++...........+++.+
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~ 196 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHC 196 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEEC
Confidence 9999887764211 12346899999998877753 68999999999998888876553222222233455667
Q ss_pred eCCEEEEEECccCCCCCeeEEEec--CCCCCc-eeEEE-cCCCCEEEEEcCCCeEEEEEccCCe--EeEEeeecC-----
Q 020021 180 FGGYIRMFDARKYEKGPFDIFSVG--GDISDA-NVVKF-SNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNVKP----- 248 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~~~~~~~~--~~~~~v-~~v~~-s~dg~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~----- 248 (332)
.||.+-+.++.....- ....... .....+ ....| .++|+++. .+.+|+|+++|..++. .+..+....
T Consensus 197 ~DG~~~~v~~~~~g~v-~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 197 RDGSLAKVAFGTEGTP-EITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp TTSCEEEEECCSSSCC-EEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred CCCCEEEEECCCCCeE-EEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccccc
Confidence 7888888887642111 1111000 000111 11355 47886554 5568999999986653 333332100
Q ss_pred -C-CCCcceEEEECCCCCEEEEEcC----------CCcEEEEECCCCceEEEecCCCCCCceEEeCCCee-EE-Eec--c
Q 020021 249 -V-SRNSTLEASFSPEGMFVISGSG----------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MF-VTG--S 312 (332)
Q Consensus 249 -~-~~~~~~~v~~spdg~~l~sgs~----------Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~-~l-~t~--~ 312 (332)
. .......++++|+++.++.... ...|.+.|+.+++.+..+.. ..++..|+++||++ +| ++. +
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~ 353 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGD 353 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTT
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCC
Confidence 0 0112224788999988887642 24799999999998887643 23678999999986 44 443 4
Q ss_pred ceEEEecccc
Q 020021 313 SELSFWIPDL 322 (332)
Q Consensus 313 ~d~~~w~~~~ 322 (332)
.++.+.+...
T Consensus 354 ~~VsViD~~t 363 (386)
T 3sjl_D 354 KTLYIHDAES 363 (386)
T ss_dssp TEEEEEETTT
T ss_pred CeEEEEECCC
Confidence 5688887644
No 203
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.50 E-value=5.6e-12 Score=123.43 Aligned_cols=274 Identities=10% Similarity=0.023 Sum_probs=165.6
Q ss_pred CCCCCEEEEEeCCC---cEEEEEc--CCCeeeEEee------ecccceeEEEEccCCCEEEEecC-CC-CCceeEEEEcc
Q 020021 43 HKSSSYLVTASDDE---SIRLYDV--TAATCLKTIN------SKKYGVDLVCFTSHPTTVIYSSK-NG-WDESLRLLSLH 109 (332)
Q Consensus 43 s~dg~~l~tgs~D~---tv~iwd~--~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~s~-~g-~d~~v~v~d~~ 109 (332)
+|+|++++-...++ .-.||-. ..++....+. .|...+..++|+|+++.++++.. +| .+.+|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 38899888777665 3556644 3443322221 23345778999999999887653 22 24789999999
Q ss_pred CCceEEEeecccccE--EEEEecCCCCeEEEeeCCCc-------------EEEEeCCCceEE--EEEEec----CceeEE
Q 020021 110 DNKYLRYFKGHHDRV--VSLSLCSSKDCFISGSLDRT-------------VLLWDQRAEKCQ--GLLRVQ----GRPAAA 168 (332)
Q Consensus 110 ~~~~~~~~~~h~~~V--~~v~~~~~~~~l~s~s~Dg~-------------i~iWd~~~~~~~--~~~~~~----~~~~~~ 168 (332)
+++.+. ..+...+ ..++|+|||+.|+.++.|.. |++|++.++... ..+... ......
T Consensus 156 tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 156 SGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 987541 1232233 67899999999999999887 999999876521 222221 123456
Q ss_pred EcCCCeEEE-EEeCC----EEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEc---CCCeEEEEEccCCeE
Q 020021 169 YDDQGLVFA-VAFGG----YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT---MEGHIHVLDSFRGTL 240 (332)
Q Consensus 169 ~~~~~~~~~-~~~~~----~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~---~dg~i~i~d~~~~~~ 240 (332)
+++++..++ .+.++ .|.+||... +....+.. +........+ ++|.+++.+. .++.|.+||+.++..
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~---~~~~~l~~--~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~ 307 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGE---KDFRLLVK--GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPAR 307 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTC---SSCEEEEE--CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSG
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCC---CceEEeec--CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCc
Confidence 777775443 44343 566665432 22222221 2223344444 6777444443 257899999877642
Q ss_pred --eEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECC-CCceEEEecCC-CCCCceEEeCCCeeEEE-eccc--
Q 020021 241 --LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR-SGKEVASWMSF-DTEPPVIKWTPGSLMFV-TGSS-- 313 (332)
Q Consensus 241 --~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~-~~~~~~~~~~~-~~~v~~l~~sp~~~~l~-t~~~-- 313 (332)
...+.. ......+..++|+ ++..+++...|+..+||.+. +++.+..+..+ ...+..++++|++..++ +.++
T Consensus 308 ~~~~~l~~-~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~ 385 (695)
T 2bkl_A 308 ASWKEIVP-EDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFT 385 (695)
T ss_dssp GGCEEEEC-CCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETT
T ss_pred cCCeEEec-CCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 122211 1113345667887 78899999999988888664 45555555443 45567788999886554 3322
Q ss_pred ---eEEEecccccccc
Q 020021 314 ---ELSFWIPDLSKLG 326 (332)
Q Consensus 314 ---d~~~w~~~~~~~~ 326 (332)
.+.+|+....++.
T Consensus 386 ~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 386 TPRQIYKTSVSTGKSE 401 (695)
T ss_dssp EEEEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCcEE
Confidence 2666665544443
No 204
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.45 E-value=2.1e-11 Score=119.30 Aligned_cols=245 Identities=12% Similarity=0.092 Sum_probs=152.9
Q ss_pred cCCCcEEEEEECCCCCEEE-----EEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCC---------
Q 020021 32 DYNGRISSMDFHKSSSYLV-----TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN--------- 97 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~-----tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~--------- 97 (332)
+|...+.+++|||||++|| +|+.+.+|++||+.+++.+... ........++|+ +++.+++++..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 4666799999999999988 3445578999999999875431 111113457899 99999888754
Q ss_pred -CCCceeEEEEccCCce----EEEeec-ccccEEEEEecCCCCeEEEe-e---CCCcEEEEeCCCce-EEEEEEecC--c
Q 020021 98 -GWDESLRLLSLHDNKY----LRYFKG-HHDRVVSLSLCSSKDCFISG-S---LDRTVLLWDQRAEK-CQGLLRVQG--R 164 (332)
Q Consensus 98 -g~d~~v~v~d~~~~~~----~~~~~~-h~~~V~~v~~~~~~~~l~s~-s---~Dg~i~iWd~~~~~-~~~~~~~~~--~ 164 (332)
+....|++|++.++.. +..... |...+.++.++|||++|+-. + .+..|.+||+.++. ....+.... .
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 2234589999877542 323333 55567889999999977433 3 23589999987652 222222221 1
Q ss_pred eeEEEcCCCeEEEEEe-C---CEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCC---eEEEEEccC
Q 020021 165 PAAAYDDQGLVFAVAF-G---GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG---HIHVLDSFR 237 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~-~---~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg---~i~i~d~~~ 237 (332)
......+++.++..+. + +.|..+|+..........+. .+...+. .++++++.++....++ .|++||+..
T Consensus 284 ~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 284 VSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI--PERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--CCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe--cCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 1122233444544443 2 57888998754322222222 2223333 8999998887766544 789999874
Q ss_pred CeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCC----CcEEEEECCCCce
Q 020021 238 GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD----GSVYAWSVRSGKE 285 (332)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~D----g~i~vWd~~~~~~ 285 (332)
+. ...+... ....+..+.++|++..++....+ ++++.||+.+++.
T Consensus 360 ~~-~~~l~~p--~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 360 KR-VREVALP--GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CE-EEEECCS--SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred Ce-eEEeecC--CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 43 3333321 22344456678888776665444 7999999987653
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.44 E-value=2.9e-11 Score=104.89 Aligned_cols=175 Identities=8% Similarity=0.041 Sum_probs=131.5
Q ss_pred CCceeEEEEccCCceEEEeeccc-ccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEE
Q 020021 99 WDESLRLLSLHDNKYLRYFKGHH-DRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFA 177 (332)
Q Consensus 99 ~d~~v~v~d~~~~~~~~~~~~h~-~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (332)
.|+.|.+||.++++.+..+..+. ..+..+.+.|+|+.++ +.++.|..||. +++.+..+..+
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~--------------- 74 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP--------------- 74 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC---------------
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC---------------
Confidence 38899999999999999998776 4788999999999888 45778999997 66544333210
Q ss_pred EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcC-CCeEEEEEccCCeEeEEeeecCC---CCCc
Q 020021 178 VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM-EGHIHVLDSFRGTLLSTYNVKPV---SRNS 253 (332)
Q Consensus 178 ~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~---~~~~ 253 (332)
....+..+.+.+||+++++.+. ++.+..+|. .|+.+..+..... +...
T Consensus 75 ---------------------------~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~ 126 (276)
T 3no2_A 75 ---------------------------AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQ 126 (276)
T ss_dssp ---------------------------TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGS
T ss_pred ---------------------------CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCccccc
Confidence 0012456788999999998877 888988885 6887776654221 1123
Q ss_pred ceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEeccc
Q 020021 254 TLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 321 (332)
Q Consensus 254 ~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~ 321 (332)
...+++.++|+++++.+.++.|.+||.. ++.+..+... ..+..+.+.|+++.++++... +..++++
T Consensus 127 ~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp CSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred ccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 3456789999999999999999999987 9998887654 356678889999888876654 6666666
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.43 E-value=7e-11 Score=108.18 Aligned_cols=277 Identities=9% Similarity=0.002 Sum_probs=179.7
Q ss_pred CCCCEEEEE-eCC----CcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCC-------CCCceeEEEEccCC
Q 020021 44 KSSSYLVTA-SDD----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSLHDN 111 (332)
Q Consensus 44 ~dg~~l~tg-s~D----~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-------g~d~~v~v~d~~~~ 111 (332)
++++.+... ..+ ++|.++|..+++.+.++.....+ .+.++|+++.++.+... ..++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 455654443 333 69999999999999999876655 78999999988877521 12568999999999
Q ss_pred ceEEEeecc-------cccEEEEEecCCCCeEEEeeC--CCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCC
Q 020021 112 KYLRYFKGH-------HDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGG 182 (332)
Q Consensus 112 ~~~~~~~~h-------~~~V~~v~~~~~~~~l~s~s~--Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (332)
+.+..+.-- -..-..+.|+|||++++.+.. +++|.+.|..+.+....+...............+++...+|
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG 239 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDG 239 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTS
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCC
Confidence 888776421 122346789999998888764 57899999999998877766443212222234455556677
Q ss_pred EEEEEECccCCCCCe--eEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEe--EEeeecCCC-------C
Q 020021 183 YIRMFDARKYEKGPF--DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL--STYNVKPVS-------R 251 (332)
Q Consensus 183 ~i~vwd~~~~~~~~~--~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~-------~ 251 (332)
.+.+.+....+.... ..+..... .-...+.|++++..++..+..+.+.++|....... ..+...... .
T Consensus 240 ~~~~V~~~~~~v~~~~~~~~~v~~~-p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p 318 (426)
T 3c75_H 240 SLARVDFADGETKVTNTEVFHTEDE-LLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRP 318 (426)
T ss_dssp SEEEEECCTTCCEEEECCCCSCTTS-CBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred CEEEEECCCCcEEEEeeeeeccCCC-ceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence 777777632111000 00111111 11123568999988887788899999998654422 222210000 0
Q ss_pred CcceEEEECCCCCEEEEEcC----------CCcEEEEECCCCceEEEecCCCCCCceEEeCCCee-EEEecc---ceEEE
Q 020021 252 NSTLEASFSPEGMFVISGSG----------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGS---SELSF 317 (332)
Q Consensus 252 ~~~~~v~~spdg~~l~sgs~----------Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~t~~---~d~~~ 317 (332)
.....++++||++.++.... ++.|.+.|..+.+.+..+.. ......++|+||++ ++.+.. .++.+
T Consensus 319 ~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsV 397 (426)
T 3c75_H 319 GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHI 397 (426)
T ss_dssp CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEE
Confidence 11113789999887776632 35799999999998888743 23578999999997 555543 45888
Q ss_pred ecccccc
Q 020021 318 WIPDLSK 324 (332)
Q Consensus 318 w~~~~~~ 324 (332)
++....+
T Consensus 398 ID~~t~k 404 (426)
T 3c75_H 398 YDAATGE 404 (426)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 8874433
No 207
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.42 E-value=5e-11 Score=107.34 Aligned_cols=245 Identities=9% Similarity=-0.029 Sum_probs=154.6
Q ss_pred EEEEEeCCC----cEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCC-------CCCceeEEEEccCCceEEE
Q 020021 48 YLVTASDDE----SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSLHDNKYLRY 116 (332)
Q Consensus 48 ~l~tgs~D~----tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-------g~d~~v~v~d~~~~~~~~~ 116 (332)
..++-..+. +|-+.|..+++.+.++.....+ .+.++|+++.++.+... ..++.|.++|..+++.+.+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 445555555 7889999999999999876655 68999999998887521 1267899999999999888
Q ss_pred eecc-------cccEEEEEecCCCCeEEEeeC--CCcEEE--EeCCCceEEEEEEecCc---------eeEEEcCCC---
Q 020021 117 FKGH-------HDRVVSLSLCSSKDCFISGSL--DRTVLL--WDQRAEKCQGLLRVQGR---------PAAAYDDQG--- 173 (332)
Q Consensus 117 ~~~h-------~~~V~~v~~~~~~~~l~s~s~--Dg~i~i--Wd~~~~~~~~~~~~~~~---------~~~~~~~~~--- 173 (332)
+.-+ -..-..+.++|||++++.+.. +..+.+ +|..+ ...+..... ......+++
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~ 188 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLA 188 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCE
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEE
Confidence 7533 023457899999998888764 457888 99866 223322110 000011111
Q ss_pred -----------------------------------eEEEEEeCCEEEEEECccCCCCCeeEEEec-------C-CCCCce
Q 020021 174 -----------------------------------LVFAVAFGGYIRMFDARKYEKGPFDIFSVG-------G-DISDAN 210 (332)
Q Consensus 174 -----------------------------------~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~-------~-~~~~v~ 210 (332)
.++.++. +.+.+.|...........+.+. + ......
T Consensus 189 ~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 267 (368)
T 1mda_H 189 ASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQ 267 (368)
T ss_dssp EEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSS
T ss_pred EEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcce
Confidence 1111222 3344444321100000000000 0 001122
Q ss_pred eEEEcCCCCEEEEEcC---------CCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCC-EEEEEc-CCCcEEEEE
Q 020021 211 VVKFSNDGRLMLLTTM---------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGS-GDGSVYAWS 279 (332)
Q Consensus 211 ~v~~s~dg~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~-~l~sgs-~Dg~i~vWd 279 (332)
.++++|||+.+.++.. ++.+.++|+.+++.+.++.... ....++|+|||+ .+++.. .+++|.++|
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~----~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH----DSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC----CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 3789999987776533 2356799999999888776432 356799999998 455555 599999999
Q ss_pred CCCCceEEEecCCCCCCceEEeCC
Q 020021 280 VRSGKEVASWMSFDTEPPVIKWTP 303 (332)
Q Consensus 280 ~~~~~~~~~~~~~~~~v~~l~~sp 303 (332)
+.+++.+.++.... ....+++.+
T Consensus 344 ~~t~kvv~~I~vg~-~P~~i~~~~ 366 (368)
T 1mda_H 344 AASDQDQSSVELDK-GPESLSVQN 366 (368)
T ss_dssp SSSCEEEEECCCCS-CCCEEECCC
T ss_pred CCCCcEEEEEECCC-CCCEEEeec
Confidence 99999988876543 466777765
No 208
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.42 E-value=2e-09 Score=93.17 Aligned_cols=236 Identities=8% Similarity=0.065 Sum_probs=157.9
Q ss_pred cCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEee--ecccceeEEEEccCCCEEEEecCCCCCceeEEEEcc
Q 020021 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~ 109 (332)
.+...+.++.++++|.++++...++.|..||.. ++. ..+. .....+..+++.+++...+.... ++.+.++|.
T Consensus 54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~- 127 (299)
T 2z2n_A 54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITD- 127 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECT-
T ss_pred cccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECC-
Confidence 345678999999999998888878999999986 332 2232 23345677888887754444322 567889998
Q ss_pred CCceEE-EeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec----CceeEEEcCCCeEEEEEe-CCE
Q 020021 110 DNKYLR-YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFAVAF-GGY 183 (332)
Q Consensus 110 ~~~~~~-~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~ 183 (332)
+++... .+..+...+.++++.++++..++...++.|..||. +++... +... ......+++++.++.+.. ++.
T Consensus 128 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 205 (299)
T 2z2n_A 128 DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-FKIPTPASGPVGITKGNDDALWFVEIIGNK 205 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE-eeCCCCCCcceeEEECCCCCEEEEccCCce
Confidence 544332 23334567899999999988888777889999998 555432 2121 122455666676665553 678
Q ss_pred EEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCC
Q 020021 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 263 (332)
Q Consensus 184 i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg 263 (332)
|..||. .. .+..+........+..++++++|+++++...++.|..||. .++. ..+... .....+..+++ ++|
T Consensus 206 i~~~~~-~g---~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~-~~~~~~-~~~~~~~~i~~-~~g 277 (299)
T 2z2n_A 206 IGRITT-SG---EITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII-EEYPIQ-IKSAEPHGICF-DGE 277 (299)
T ss_dssp EEEECT-TC---CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE-EEEECS-SSSCCEEEEEE-CSS
T ss_pred EEEECC-CC---cEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCce-EEEeCC-CCCCccceEEe-cCC
Confidence 999987 32 2333333333356788999999998888778899999998 4543 333322 22355678889 999
Q ss_pred CEEEEEcCCCcEEEEECCCCc
Q 020021 264 MFVISGSGDGSVYAWSVRSGK 284 (332)
Q Consensus 264 ~~l~sgs~Dg~i~vWd~~~~~ 284 (332)
+.+++.+ .+.+..++..+++
T Consensus 278 ~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 278 TIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp CEEEEET-TTEEEEEEEC---
T ss_pred CEEEEec-CCcEEEEEcCccc
Confidence 9888776 5667777776543
No 209
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.41 E-value=2.6e-11 Score=103.99 Aligned_cols=200 Identities=8% Similarity=0.029 Sum_probs=137.9
Q ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEee-ecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce
Q 020021 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~ 113 (332)
..+.+|+++++|+++++.. ++.|.+||....... .+. .....+..+++.+++...++... ++.|.+|+..+...
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRG---NNRVVKLAAGSKTQ 141 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGG---GTEEEEECTTCCSC
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECC---CCEEEEEECCCcee
Confidence 4678899999999777766 889999998765432 232 22245678889888864443322 56788887655443
Q ss_pred EEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCC
Q 020021 114 LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYE 193 (332)
Q Consensus 114 ~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~ 193 (332)
......+...+.++++.++++.+++...++.|.+||..........
T Consensus 142 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~---------------------------------- 187 (270)
T 1rwi_B 142 TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP---------------------------------- 187 (270)
T ss_dssp EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC----------------------------------
T ss_pred EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec----------------------------------
Confidence 3333334456788999999988888777889999987654321000
Q ss_pred CCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCC
Q 020021 194 KGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 273 (332)
Q Consensus 194 ~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg 273 (332)
.........++++++|.++++...++.|.+||........ .. ..+...+..++++|+|+.+++...++
T Consensus 188 ---------~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~--~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 188 ---------FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LP--FTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp ---------CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CC--CCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred ---------ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ec--cCCCCCceeEEECCCCCEEEEECCCC
Confidence 0001234678999999988888889999999986543322 11 11224567899999999999999999
Q ss_pred cEEEEECCCCce
Q 020021 274 SVYAWSVRSGKE 285 (332)
Q Consensus 274 ~i~vWd~~~~~~ 285 (332)
.|+++++...+.
T Consensus 256 ~v~~~~~~~~~~ 267 (270)
T 1rwi_B 256 RVVKLTSLEHHH 267 (270)
T ss_dssp EEEEECCCGGGS
T ss_pred EEEEEcCCCccc
Confidence 999999876543
No 210
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=2e-11 Score=109.28 Aligned_cols=266 Identities=10% Similarity=0.016 Sum_probs=159.0
Q ss_pred hcccceeEeccCCCcEEEEEECCCCCEEEEEe--CCCcEEEEEcCCCeeeEEee-------ecccceeEEEEccCCCEEE
Q 020021 22 QSMEVGMSFRDYNGRISSMDFHKSSSYLVTAS--DDESIRLYDVTAATCLKTIN-------SKKYGVDLVCFTSHPTTVI 92 (332)
Q Consensus 22 ~~~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs--~D~tv~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~ 92 (332)
+.++.+..+. ..+..|+++|+|+++++.. .++.++||.+.+++. ..+. .+-..+..+++.+++. ++
T Consensus 7 g~~~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~ 81 (343)
T 2qe8_A 7 DRLEVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGI-VW 81 (343)
T ss_dssp -CCEEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSE-EE
T ss_pred ceeEEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCc-EE
Confidence 3455555555 6789999999999998864 234367776655543 3222 1234577889988875 43
Q ss_pred EecCCCC----CceeEEEEccCCceEEEeec------ccccEEEEEecCCC-CeEEEee---CCCcEEEEeCCCceEEEE
Q 020021 93 YSSKNGW----DESLRLLSLHDNKYLRYFKG------HHDRVVSLSLCSSK-DCFISGS---LDRTVLLWDQRAEKCQGL 158 (332)
Q Consensus 93 ~~s~~g~----d~~v~v~d~~~~~~~~~~~~------h~~~V~~v~~~~~~-~~l~s~s---~Dg~i~iWd~~~~~~~~~ 158 (332)
+... +. +..|.+||+++++.+..+.- +...+..+++.+++ ...++-+ .++.|.+||+.+++....
T Consensus 82 v~D~-g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 82 MLDN-GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp EEEC-HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE
T ss_pred EEcC-CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE
Confidence 3321 21 35799999999887666543 22356889999754 4556665 788999999987765443
Q ss_pred EEec-C-ce-eEEEcCCCeEEE-EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCC-eEEEE
Q 020021 159 LRVQ-G-RP-AAAYDDQGLVFA-VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG-HIHVL 233 (332)
Q Consensus 159 ~~~~-~-~~-~~~~~~~~~~~~-~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg-~i~i~ 233 (332)
+..+ . .+ ...+..++..+. ...++.++.|. ..++.+++||||+.+..+...+ .++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~------------------~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 161 LQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH------------------LGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp CTTCTTTSCCSCCCEETTEECBEECTTSCEECCC------------------CCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred ecCCCcccccccceeECCEEEEeccCCCceecee------------------cccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 3210 0 00 001111222211 11223333221 1346799999998777766555 66666
Q ss_pred Ecc---CCeE-----eEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEec-CCCCCCceEEeCCC
Q 020021 234 DSF---RGTL-----LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM-SFDTEPPVIKWTPG 304 (332)
Q Consensus 234 d~~---~~~~-----~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~-~~~~~v~~l~~sp~ 304 (332)
+.. .+.. ...+... .+......++++++|+++++...++.|.+||..+++...... .....+..++|.|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~ 301 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD 301 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTT
T ss_pred EHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCC
Confidence 642 1100 0000000 011233468999999999999999999999985665422221 12345788999999
Q ss_pred eeEEEecc
Q 020021 305 SLMFVTGS 312 (332)
Q Consensus 305 ~~~l~t~~ 312 (332)
++++++..
T Consensus 302 g~l~v~~~ 309 (343)
T 2qe8_A 302 GYLYFDCN 309 (343)
T ss_dssp SCEEEEEC
T ss_pred CcEEEEeC
Confidence 98888765
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.40 E-value=7.7e-10 Score=97.05 Aligned_cols=230 Identities=11% Similarity=0.111 Sum_probs=141.1
Q ss_pred eeEeccCCCcEEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEE
Q 020021 27 GMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (332)
Q Consensus 27 ~~~l~~h~~~I~~i~~s~dg~-~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v 105 (332)
...+..+.....+..|+|+|+ ++++...++.|..|+. +++ ...+......+..+++.+++..+++... ++.|.+
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~---~~~v~~ 111 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHG---RRAITR 111 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETT---TTEEEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECC---CCEEEE
Confidence 334555556678899999998 6778888899999998 444 3445444555778899998874443321 457888
Q ss_pred EEccCCceEEEeecc-----cccEEEEEecCCCCeEEE----eeCC-------------CcEEEEeCCCceEEEEEEecC
Q 020021 106 LSLHDNKYLRYFKGH-----HDRVVSLSLCSSKDCFIS----GSLD-------------RTVLLWDQRAEKCQGLLRVQG 163 (332)
Q Consensus 106 ~d~~~~~~~~~~~~h-----~~~V~~v~~~~~~~~l~s----~s~D-------------g~i~iWd~~~~~~~~~~~~~~ 163 (332)
++.. ++. ..+..+ ...+..+.+.++|+..+| |..+ +.|..+|..+++.
T Consensus 112 ~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-------- 181 (305)
T 3dr2_A 112 SDAD-GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-------- 181 (305)
T ss_dssp ECTT-SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--------
T ss_pred ECCC-CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--------
Confidence 8875 543 222221 123567888888887776 3221 1222222222111
Q ss_pred ceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCC------CeEEEEEccC
Q 020021 164 RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME------GHIHVLDSFR 237 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~d------g~i~i~d~~~ 237 (332)
.... .....+.++|+|||+.+..+... +.|++||+..
T Consensus 182 ----------------------------------~~~~---~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 182 ----------------------------------QRMA---DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp ----------------------------------EEEE---EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred ----------------------------------EEEe---cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 0000 01224678999999976666554 7899999876
Q ss_pred CeEeEEeee-cCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeE-EEeccc
Q 020021 238 GTLLSTYNV-KPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLM-FVTGSS 313 (332)
Q Consensus 238 ~~~~~~~~~-~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~-l~t~~~ 313 (332)
+. +..... ..........++++++|++.++. .+| |.+|+. +++.+..+.... .+..++|+|+++. ++++..
T Consensus 225 ~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~g-v~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 225 GA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTG-VCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp TE-EEEEEEEECCSSSCCCSEEECTTSCEEECC-SSE-EEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETT
T ss_pred CC-ccCCeEEEECCCCCCCeEEECCCCCEEEec-CCc-EEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCC
Confidence 54 221111 11112233468899999965544 555 999998 567776665444 5889999998754 444444
No 212
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=1.3e-10 Score=114.71 Aligned_cols=259 Identities=12% Similarity=0.103 Sum_probs=157.8
Q ss_pred CCCCCEEEEEeCCCc---EEEEEcC-----CCeeeEEe------eecccceeEEEEccCCCEEEEecCC-CCC-ceeEEE
Q 020021 43 HKSSSYLVTASDDES---IRLYDVT-----AATCLKTI------NSKKYGVDLVCFTSHPTTVIYSSKN-GWD-ESLRLL 106 (332)
Q Consensus 43 s~dg~~l~tgs~D~t---v~iwd~~-----~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~s~~-g~d-~~v~v~ 106 (332)
+|+|++++-...++. -.||-.. .++....+ ..+...+...+|+|+++.+++++.. |.+ .+|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 389999887776654 5667543 33322211 1222356778999999999887643 322 579999
Q ss_pred EccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCc--------------EEEEeCCCceE--EEEEEecC----cee
Q 020021 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRT--------------VLLWDQRAEKC--QGLLRVQG----RPA 166 (332)
Q Consensus 107 d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~--------------i~iWd~~~~~~--~~~~~~~~----~~~ 166 (332)
|+++++.+.. ..+...+..++|+|| +.|+.++.|+. |.+|++.++.. ...+.... ...
T Consensus 195 dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 9999887543 112222357899999 99998887765 88999876542 12222221 234
Q ss_pred EEEcCCCeEEE-EEeC-----CEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcC----CCeEEEEEcc
Q 020021 167 AAYDDQGLVFA-VAFG-----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM----EGHIHVLDSF 236 (332)
Q Consensus 167 ~~~~~~~~~~~-~~~~-----~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~----dg~i~i~d~~ 236 (332)
..+++++..++ .+.+ ..|.+||+..........+. .+....... ++|+|+.++..+. ++.|.+||+.
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI--PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE--CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec--CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 56778875444 3433 38999998653111022222 222233333 4589988887765 3469999988
Q ss_pred CCe-EeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECC-CCceEEEecC-CCCCCceEEeCCCeeEEE
Q 020021 237 RGT-LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVR-SGKEVASWMS-FDTEPPVIKWTPGSLMFV 309 (332)
Q Consensus 237 ~~~-~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~-~~~~~~~~~~-~~~~v~~l~~sp~~~~l~ 309 (332)
++. ....+. +.+...+..++++ ++..+++...|+..+||.+. +++.+..+.. ....+..++++|++..++
T Consensus 350 ~~~~~~~~l~--~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 350 GSTPRFDTVV--PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp SSSCEEEEEE--CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEE
T ss_pred CCccccEEEe--cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEE
Confidence 742 222222 2233344456776 67788899999987777654 4555565543 345677889999886444
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.38 E-value=2.3e-09 Score=95.12 Aligned_cols=225 Identities=14% Similarity=0.074 Sum_probs=142.3
Q ss_pred CcEEEEEECCCC-CEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce
Q 020021 35 GRISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (332)
Q Consensus 35 ~~I~~i~~s~dg-~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~ 113 (332)
.-..+..|+|++ .++++...++.|..||..+++.. .+. ....+..+++.+++..++.. +..+.+||..+++.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-----~~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-----DDGLFLRDTATGVL 121 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-----TTEEEEEETTTCCE
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-----CCCEEEEECCCCcE
Confidence 345688899975 56677778899999999887643 232 23457788899888765543 23488999988775
Q ss_pred EEEeec----ccccEEEEEecCCCCeEEEeeCC----CcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEE
Q 020021 114 LRYFKG----HHDRVVSLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIR 185 (332)
Q Consensus 114 ~~~~~~----h~~~V~~v~~~~~~~~l~s~s~D----g~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 185 (332)
...... ....+..+.++|+|+.+++...+ +...+|.+.+++. +
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~-----------------------------~ 172 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV-----------------------------T 172 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE-----------------------------E
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcE-----------------------------E
Confidence 432221 12468899999999876654322 1223332211211 1
Q ss_pred EEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEE-EEEcCCCeEEEEEcc--CC-eEe--EEeeecCCCCCcceEEEE
Q 020021 186 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLM-LLTTMEGHIHVLDSF--RG-TLL--STYNVKPVSRNSTLEASF 259 (332)
Q Consensus 186 vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l-~~~~~dg~i~i~d~~--~~-~~~--~~~~~~~~~~~~~~~v~~ 259 (332)
.+. . .....+.++++|||+.+ ++.+.++.|.+||.. ++ ... ..+............+++
T Consensus 173 ~~~------------~---~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~ 237 (326)
T 2ghs_A 173 KLF------------A---DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVC 237 (326)
T ss_dssp EEE------------E---EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEE
T ss_pred Eee------------C---CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEE
Confidence 000 0 00123578999999865 455667899999985 55 321 112111112233457899
Q ss_pred CCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCCceEEeC-CCeeE-EEec
Q 020021 260 SPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWT-PGSLM-FVTG 311 (332)
Q Consensus 260 spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~s-p~~~~-l~t~ 311 (332)
+++|+++++...++.|.+||. +++.+..+......+.+++|+ |+++. +++.
T Consensus 238 d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 238 DAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp CTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 999998888767788999998 677777666555568999998 88654 3443
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.36 E-value=5.3e-11 Score=107.60 Aligned_cols=175 Identities=17% Similarity=0.196 Sum_probs=129.5
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCe---------eeE-EeeecccceeEEEEccCCCEEEEecCCCCCceeEE
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAAT---------CLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~---------~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v 105 (332)
+++.+++++...++++|+.|+ +++|++.... ... ....... |..++| ++..++.+ . ++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~---~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-T---RNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-E---SSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-c---CCcEEE
Confidence 689999999999999999985 5669875432 111 1223344 888899 77777777 2 578999
Q ss_pred EEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEE
Q 020021 106 LSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIR 185 (332)
Q Consensus 106 ~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 185 (332)
||+.+.........|...|..+.+.+. .++.++.||++.+||++.+.....
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~--------------------------- 161 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL--------------------------- 161 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE---------------------------
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccc---------------------------
Confidence 999877666667778888888776654 388889999999999876543210
Q ss_pred EEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeE--eEEeeec------CCCCCcceEE
Q 020021 186 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL--LSTYNVK------PVSRNSTLEA 257 (332)
Q Consensus 186 vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~------~~~~~~~~~v 257 (332)
...++++++||+| ++.+..||++++|+...++. ..++... ..+...+.++
T Consensus 162 --------------------~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI 219 (388)
T 1xip_A 162 --------------------AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSV 219 (388)
T ss_dssp --------------------EESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEE
T ss_pred --------------------cCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEE
Confidence 0247789999999 67889999999999887775 4444211 1245778899
Q ss_pred EECCCCCEEEEE
Q 020021 258 SFSPEGMFVISG 269 (332)
Q Consensus 258 ~~spdg~~l~sg 269 (332)
.|.++++++++-
T Consensus 220 ~wl~~~~flv~y 231 (388)
T 1xip_A 220 TILSPQDFLAVF 231 (388)
T ss_dssp EESSSSEEEEEE
T ss_pred EEecCCeEEEEE
Confidence 999999999884
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.30 E-value=1.6e-12 Score=117.74 Aligned_cols=206 Identities=17% Similarity=0.050 Sum_probs=114.9
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeeccccc-
Q 020021 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDR- 123 (332)
Q Consensus 45 dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~- 123 (332)
++..+++++.|+.|..||..+|+.+.++.. ..+....+..++..++.++ .|+.++.||.++++.+..+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s---~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDP---NDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECT---TTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeC---CCCEEEEEECCCCceeeeeeccCccc
Confidence 478999999999999999999999887765 3343333444554455433 3789999999998877666544321
Q ss_pred EEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEec
Q 020021 124 VVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203 (332)
Q Consensus 124 V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~ 203 (332)
+.+.....++..+++++.|+.+..||.++++....+....
T Consensus 83 ~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---------------------------------------- 122 (369)
T 2hz6_A 83 VQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---------------------------------------- 122 (369)
T ss_dssp HTTCSCC-----CCCCEEEEEEEEECCC----------------------------------------------------
T ss_pred cccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----------------------------------------
Confidence 1110011145578888899999999998876532221100
Q ss_pred CCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCC---CEEEEEcCCCcEEEEEC
Q 020021 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG---MFVISGSGDGSVYAWSV 280 (332)
Q Consensus 204 ~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg---~~l~sgs~Dg~i~vWd~ 280 (332)
...++|++..+++++.++.|+.||..+|+.+-.+..... ...+++++. ..++.++.||.|+.||.
T Consensus 123 -------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~-----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 123 -------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY-----AASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp -----------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE-----CCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred -------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc-----cCccccCCccccceEEEECCCCEEEEEEC
Confidence 012345677788888889999999988876544432110 112233332 45667889999999999
Q ss_pred CCCceEEEecCCCCCCceEEeCCCeeE
Q 020021 281 RSGKEVASWMSFDTEPPVIKWTPGSLM 307 (332)
Q Consensus 281 ~~~~~~~~~~~~~~~v~~l~~sp~~~~ 307 (332)
.+++.+.........+....+++++..
T Consensus 191 ~tG~~~W~~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 191 ESGDVLWIQNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp TTCCEEEEEECSSCEEEEEECTTSSCE
T ss_pred CCCcEEEEecCCCceEEEEEecCCceE
Confidence 999987766533222234456677754
No 216
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.29 E-value=2.9e-08 Score=85.78 Aligned_cols=233 Identities=7% Similarity=0.093 Sum_probs=155.3
Q ss_pred cCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeE-EeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC
Q 020021 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 110 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~ 110 (332)
.+...+.++.++++|+++++...++.|..||.. ++... .+......+..+++.+++...+.... ++.+..+|..
T Consensus 59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~- 133 (300)
T 2qc5_A 59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN---GDRIGKLTAD- 133 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT---TTEEEEECTT-
T ss_pred CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC---CCeEEEECCC-
Confidence 344678999999999988888778999999988 55432 22222345777888887765444321 4678888887
Q ss_pred CceEE-EeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec----CceeEEEcCCCeEEEEEe-CCEE
Q 020021 111 NKYLR-YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFAVAF-GGYI 184 (332)
Q Consensus 111 ~~~~~-~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~i 184 (332)
++... .+......+.++.+.++++..++...++.|..+|. +++... +..+ ......+++++.++.+.. .+.|
T Consensus 134 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 211 (300)
T 2qc5_A 134 GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKI 211 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEE
Confidence 55432 23334567899999999997777777889999998 444332 3221 122445666676665554 5689
Q ss_pred EEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCC
Q 020021 185 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 264 (332)
Q Consensus 185 ~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~ 264 (332)
..||.. +.+..+........+..++++++|+++++...++.|..+|. +++.. .+... .....+..++++++|+
T Consensus 212 ~~~~~~----g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~-~~~~~~~~i~~~~~g~ 284 (300)
T 2qc5_A 212 GRITTT----GEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQ-EYQLQ-TENAEPHGITFGKDGS 284 (300)
T ss_dssp EEECTT----CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEE-EEECC-STTCCCCCEEECTTSC
T ss_pred EEEcCC----CcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEE-EEECC-ccCCccceeEeCCCCC
Confidence 999872 22333333223345678999999998888877899999998 45443 33322 1234567889999999
Q ss_pred EEEEEcCCCcEEEEEC
Q 020021 265 FVISGSGDGSVYAWSV 280 (332)
Q Consensus 265 ~l~sgs~Dg~i~vWd~ 280 (332)
.+++.. . .|..+|.
T Consensus 285 l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 285 VWFALK-C-KIGKLNL 298 (300)
T ss_dssp EEEECS-S-EEEEEEE
T ss_pred EEEEcc-C-ceEEeCC
Confidence 777665 4 6777765
No 217
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=1.4e-10 Score=104.77 Aligned_cols=170 Identities=11% Similarity=0.070 Sum_probs=121.1
Q ss_pred cEEEEEecCCCCeEEEeeCCCcEEEEeCCCce-----------EEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECcc
Q 020021 123 RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK-----------CQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARK 191 (332)
Q Consensus 123 ~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~ 191 (332)
+++.+++++....+++|+.|+. ++|+++..+ ......++......+ ++..++++.++.|++||++.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f--d~~~L~v~~~~~l~v~dv~s 115 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF--HGDQVLVSTRNALYSLDLEE 115 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE--ETTEEEEEESSEEEEEESSS
T ss_pred cccEEEEcCCCCEEEEeCCCEE-EEEEhhHhhhhhccccccccceEEeeCCCeeEEEE--CCCEEEEEcCCcEEEEEchh
Confidence 5788999999999999999855 559854322 112233444334455 66666666889999999987
Q ss_pred CCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcC
Q 020021 192 YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 271 (332)
Q Consensus 192 ~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~ 271 (332)
..... .... +...+..+.+.+. .+++++.||.+.+||+..+.... . ...+.+++|||+| ++.|..
T Consensus 116 l~~~~-~~~~---~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~------~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 116 LSEFR-TVTS---FEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-L------AQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp TTCEE-EEEE---CSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-E------EESEEEEEECSSE--EEEEET
T ss_pred hhccC-ccce---eecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-c------cCCceEEEEcCCc--eEEEEc
Confidence 65321 1111 2234566666544 38888999999999998777643 1 2467799999999 677889
Q ss_pred CCcEEEEECCCCce--EEEe------c---CCCCCCceEEeCCCeeEEEe
Q 020021 272 DGSVYAWSVRSGKE--VASW------M---SFDTEPPVIKWTPGSLMFVT 310 (332)
Q Consensus 272 Dg~i~vWd~~~~~~--~~~~------~---~~~~~v~~l~~sp~~~~l~t 310 (332)
||++++|+...++. ..++ . .|+..|.+|.|.+++.++++
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999999877664 4445 2 36778899999999998887
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.25 E-value=8e-09 Score=90.21 Aligned_cols=196 Identities=13% Similarity=0.128 Sum_probs=126.4
Q ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeec----ccceeEEEEccCCCEEEEecCCCC------Cce
Q 020021 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSK----KYGVDLVCFTSHPTTVIYSSKNGW------DES 102 (332)
Q Consensus 33 h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~s~~g~------d~~ 102 (332)
+...+.++.++|+|+++++. +..|.+||..+++........ ...+..+++.+++...+....... ...
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~ 129 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQ 129 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTC
T ss_pred CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCC
Confidence 34679999999999976654 678999999887654322211 123567889998874443321110 123
Q ss_pred eEEEEccCCceEEEeecccccEEEEEecCCCCeE-EEeeCCCcEEEEeC--CCceEEEEEEecCceeEEEcCCCeEEEEE
Q 020021 103 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF-ISGSLDRTVLLWDQ--RAEKCQGLLRVQGRPAAAYDDQGLVFAVA 179 (332)
Q Consensus 103 v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l-~s~s~Dg~i~iWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (332)
-.+|.+.....+..+..+....+.++|+|+++.| ++.+.++.|..||+ .++..... + .
T Consensus 130 ~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~-~--------------~---- 190 (297)
T 3g4e_A 130 GALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNR-R--------------S---- 190 (297)
T ss_dssp EEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEE-E--------------E----
T ss_pred cEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCc-E--------------E----
Confidence 4566554332333344455567899999999865 56677889999986 34432100 0 0
Q ss_pred eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEE
Q 020021 180 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~ 259 (332)
+.++. ........++++++|.+.++....+.|..||..+|+.+..+.. +...+.+++|
T Consensus 191 ------~~~~~-------------~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~---p~~~~t~~~f 248 (297)
T 3g4e_A 191 ------VYKLE-------------KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL---PVDKTTSCCF 248 (297)
T ss_dssp ------EEECC-------------GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC---SSSBEEEEEE
T ss_pred ------EEECC-------------CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC---CCCCceEEEE
Confidence 00000 0011235688999999988888889999999988998877763 3356788999
Q ss_pred C-CCCCEEEEEcC
Q 020021 260 S-PEGMFVISGSG 271 (332)
Q Consensus 260 s-pdg~~l~sgs~ 271 (332)
+ ||++.|+.++.
T Consensus 249 ~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 249 GGKNYSEMYVTCA 261 (297)
T ss_dssp ESGGGCEEEEEEB
T ss_pred eCCCCCEEEEEcC
Confidence 8 88887665554
No 219
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.22 E-value=7.2e-09 Score=90.54 Aligned_cols=205 Identities=11% Similarity=0.171 Sum_probs=130.9
Q ss_pred CCCcEEEEEECCC-CCEEEEEeCCCcEEEEEcCCCeeeEE-eee----cccceeEEEEccCCCEEEEecCCC--------
Q 020021 33 YNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAATCLKT-INS----KKYGVDLVCFTSHPTTVIYSSKNG-------- 98 (332)
Q Consensus 33 h~~~I~~i~~s~d-g~~l~tgs~D~tv~iwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~~~s~~g-------- 98 (332)
+...+.++.++++ |+++++.. +..|.+||.. ++.... ... ....+..+++.+++...+.....+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 5567899999999 76665554 4479999998 665433 221 113467888998886555443210
Q ss_pred ----CCceeEEEEccCCceEEEeecccccEEEEEec----CCCCeE-EEeeCCCcEEEEeCC-CceEEEEEEecCceeEE
Q 020021 99 ----WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLC----SSKDCF-ISGSLDRTVLLWDQR-AEKCQGLLRVQGRPAAA 168 (332)
Q Consensus 99 ----~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~----~~~~~l-~s~s~Dg~i~iWd~~-~~~~~~~~~~~~~~~~~ 168 (332)
..+.+..+|.. ++.. .+..+......++++ ++++.+ ++...++.|.+||.. .++....
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~---------- 214 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK---------- 214 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE----------
T ss_pred cccCCCCeEEEECCC-CCEE-EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccc----------
Confidence 01356666655 4433 333444567889999 998654 555678899999864 2221100
Q ss_pred EcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCC-CCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeec
Q 020021 169 YDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDI-SDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247 (332)
Q Consensus 169 ~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~-~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 247 (332)
+++. ....+. .....++++++|+++++...++.|.+||..+++.+..+..
T Consensus 215 ----------------~~~~------------~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~- 265 (314)
T 1pjx_A 215 ----------------KVWG------------HIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC- 265 (314)
T ss_dssp ----------------EEEE------------ECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC-
T ss_pred ----------------eEEE------------ECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC-
Confidence 0000 000010 1235688999999999888889999999887776655542
Q ss_pred CCCCCcceEEEECCCCCEE-EEEcCCCcEEEEECCC
Q 020021 248 PVSRNSTLEASFSPEGMFV-ISGSGDGSVYAWSVRS 282 (332)
Q Consensus 248 ~~~~~~~~~v~~spdg~~l-~sgs~Dg~i~vWd~~~ 282 (332)
+...+..++|+|||++| ++...++.|..|++..
T Consensus 266 --~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 266 --PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp --SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred --CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 33567789999999954 4556678999999865
No 220
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.20 E-value=6.5e-09 Score=101.49 Aligned_cols=260 Identities=12% Similarity=0.106 Sum_probs=163.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeeEEeeec-c----cceeEEEEccCCCEEEEecCC---CCCceeEEEEccCCceEEEe
Q 020021 46 SSYLVTASDDESIRLYDVTAATCLKTINSK-K----YGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYF 117 (332)
Q Consensus 46 g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~~~~~s~~---g~d~~v~v~d~~~~~~~~~~ 117 (332)
+..++.++.|+.|..+|..+|+.+-.+... . ..+...-.. .+..+++++.. +.++.+..+|.++|+.+..+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV-VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE-ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 567888999999999999999998766542 1 111110000 13345554432 23688999999999988776
Q ss_pred ecc-------------------------------cccEEEEEecCCCCeEEEeeCCCc-------------------EEE
Q 020021 118 KGH-------------------------------HDRVVSLSLCSSKDCFISGSLDRT-------------------VLL 147 (332)
Q Consensus 118 ~~h-------------------------------~~~V~~v~~~~~~~~l~s~s~Dg~-------------------i~i 147 (332)
..- ...-..+.+.++.++++.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 521 001124677888888888887764 999
Q ss_pred EeCCCceEEEEEEecCc---------eeEEEc--CCC----eEEEEEeCCEEEEEECccCCCC------Ce-eEEEe---
Q 020021 148 WDQRAEKCQGLLRVQGR---------PAAAYD--DQG----LVFAVAFGGYIRMFDARKYEKG------PF-DIFSV--- 202 (332)
Q Consensus 148 Wd~~~~~~~~~~~~~~~---------~~~~~~--~~~----~~~~~~~~~~i~vwd~~~~~~~------~~-~~~~~--- 202 (332)
||.++++.+-.++.... +....+ .++ .++....+|.+.++|.++.+.- +. -....
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 99999998877664211 111111 123 2444445789999997654310 00 00000
Q ss_pred -----------------------cCCC--CCceeEEEcCCCCEEEEEcC-------------------------------
Q 020021 203 -----------------------GGDI--SDANVVKFSNDGRLMLLTTM------------------------------- 226 (332)
Q Consensus 203 -----------------------~~~~--~~v~~v~~s~dg~~l~~~~~------------------------------- 226 (332)
.+.. ..-..++|+|+..++.+...
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 0000 01233688998877766522
Q ss_pred --------------CCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCC
Q 020021 227 --------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF 292 (332)
Q Consensus 227 --------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~ 292 (332)
+|.++.||+.+|+.+-.+.... ....-.++..+..++.|+.||.++.||..+|+.+..+...
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT----IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS----SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC----CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 3789999999999875554321 1222356668889999999999999999999999877543
Q ss_pred CC-CCceEEeCCCeeEEEe
Q 020021 293 DT-EPPVIKWTPGSLMFVT 310 (332)
Q Consensus 293 ~~-~v~~l~~sp~~~~l~t 310 (332)
.+ ...-+.|..+|++.+.
T Consensus 516 ~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 516 SGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp SCCCSCCEEEEETTEEEEE
T ss_pred CCcccCceEEEECCEEEEE
Confidence 32 2245788888875544
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.17 E-value=2.8e-09 Score=95.16 Aligned_cols=230 Identities=10% Similarity=0.013 Sum_probs=147.5
Q ss_pred cCCCcEEEEEECCCCCEEEEEeC-----CCcEEEEEcCCCeeeEEeeecc------cceeEEEEccCCCEEEEecCC-CC
Q 020021 32 DYNGRISSMDFHKSSSYLVTASD-----DESIRLYDVTAATCLKTINSKK------YGVDLVCFTSHPTTVIYSSKN-GW 99 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~l~tgs~-----D~tv~iwd~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~~~s~~-g~ 99 (332)
+|-..+.+|+|+++|+++++-.. +..|.+||+.+++.++.+.... .....+++.+++..++.+... +.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 45578999999999987766543 6889999999998877765421 234678888766565554321 13
Q ss_pred CceeEEEEccCCceEEEeecccccEE-EEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCe-EEE
Q 020021 100 DESLRLLSLHDNKYLRYFKGHHDRVV-SLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGL-VFA 177 (332)
Q Consensus 100 d~~v~v~d~~~~~~~~~~~~h~~~V~-~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 177 (332)
++.|.+||+.+++..+.+.+|..... ...+.+++..+.+.+.|++++.|... .....+++++. ++.
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~------------~~gia~s~dg~~ly~ 211 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLG------------VNGIVLDAENEWLYL 211 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCC------------EEEEEECTTSCEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecc------------cceeEeccCCCEEEE
Confidence 67899999998887777766532111 13445567777778888888877531 12345666664 333
Q ss_pred EEeC-CEEEEEECccCCCC---------CeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeec
Q 020021 178 VAFG-GYIRMFDARKYEKG---------PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247 (332)
Q Consensus 178 ~~~~-~~i~vwd~~~~~~~---------~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 247 (332)
.... ..+..++....... .+... ++......++++++|.++++...++.|.+||..+++...... .
T Consensus 212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~-~ 287 (343)
T 2qe8_A 212 SPMHSTSMYRIKSADLSNLQLTDAELGSKIERY---SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVT-D 287 (343)
T ss_dssp EESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE---EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE-C
T ss_pred EeCCCCeEEEEEHHHhcCCCCChhhhhcceEec---ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEE-C
Confidence 3333 35555553211110 11111 112235678999999999999999999999985676533322 1
Q ss_pred CCCCCcceEEEECCCCCEEEEEcCCCcEEEE
Q 020021 248 PVSRNSTLEASFSPEGMFVISGSGDGSVYAW 278 (332)
Q Consensus 248 ~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vW 278 (332)
+ .......++|+++|+++++.+..+.+.+|
T Consensus 288 ~-~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 288 E-KLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp G-GGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred C-ceecCCeeEECCCCcEEEEeCcccccccc
Confidence 1 12446689999999988887755544444
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.15 E-value=1.5e-08 Score=98.74 Aligned_cols=258 Identities=10% Similarity=0.080 Sum_probs=164.9
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeeEEeeec-c----cceeEEEEccCCCEEEEecCC---CCCceeEEEEccCCceEEEe
Q 020021 46 SSYLVTASDDESIRLYDVTAATCLKTINSK-K----YGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYF 117 (332)
Q Consensus 46 g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~~~~~s~~---g~d~~v~v~d~~~~~~~~~~ 117 (332)
+..|+.++.|+.|..+|..+|+.+-.+... . ..+...-.. .+..++.++.. +.++.|+.+|.++|+.+..+
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 568888999999999999999998777654 2 111110001 23455555432 13688999999999988776
Q ss_pred eccccc--------------------------------EEEEEecCCCCeEEEeeCCC-------------------cEE
Q 020021 118 KGHHDR--------------------------------VVSLSLCSSKDCFISGSLDR-------------------TVL 146 (332)
Q Consensus 118 ~~h~~~--------------------------------V~~v~~~~~~~~l~s~s~Dg-------------------~i~ 146 (332)
...... ...+.+.++++.++.+..++ +|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 532111 12467788888888776654 599
Q ss_pred EEeCCCceEEEEEEecCce---------eEEEc--CCC----eEEEEEeCCEEEEEECccCCCCCeeEEEecC-------
Q 020021 147 LWDQRAEKCQGLLRVQGRP---------AAAYD--DQG----LVFAVAFGGYIRMFDARKYEKGPFDIFSVGG------- 204 (332)
Q Consensus 147 iWd~~~~~~~~~~~~~~~~---------~~~~~--~~~----~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~------- 204 (332)
.+|.++++..-.++..... -.... .++ .++....+|.+.++|.++.+. +-......
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~--l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKF--ISAKNFVPVNWASGY 364 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE--EEEEESSCCSSEEEE
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCE--eccccccccCccccc
Confidence 9999999988777653210 11111 123 344444578999999765431 10111000
Q ss_pred ------------------------CC--CCceeEEEcCCCCEEEEEcC--------------------------------
Q 020021 205 ------------------------DI--SDANVVKFSNDGRLMLLTTM-------------------------------- 226 (332)
Q Consensus 205 ------------------------~~--~~v~~v~~s~dg~~l~~~~~-------------------------------- 226 (332)
.. ..-..++|+|++.++.+...
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 00 01125789998887776543
Q ss_pred -----------CCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCC-C
Q 020021 227 -----------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFD-T 294 (332)
Q Consensus 227 -----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~-~ 294 (332)
.|.|..||+.+|+.+-.+... .......+++++..++.++.||.+++||..+++.+..+.... .
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~----~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~ 520 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV----SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGV 520 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEEEEEEES----SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred ccccccCCCCCccEEEEEeCCCCcEEeecCCC----CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCc
Confidence 278999999999987555432 122334566788899999999999999999999998875433 2
Q ss_pred CCceEEeCCCeeEEEe
Q 020021 295 EPPVIKWTPGSLMFVT 310 (332)
Q Consensus 295 ~v~~l~~sp~~~~l~t 310 (332)
...-+.|.++|++++.
T Consensus 521 ~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 521 VAAPSTYMVDGRQYVS 536 (677)
T ss_dssp CSCCEEEEETTEEEEE
T ss_pred ccCCEEEEeCCEEEEE
Confidence 3345777788865543
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.14 E-value=6.8e-09 Score=90.97 Aligned_cols=203 Identities=16% Similarity=0.164 Sum_probs=132.8
Q ss_pred EEEeecccccEEEEEecCCCC-eEEEeeCCCcEEEEeCCCceEEEEEEec-C-ceeEEEcCCCeEEEEEe-CCEEEEEEC
Q 020021 114 LRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQ-G-RPAAAYDDQGLVFAVAF-GGYIRMFDA 189 (332)
Q Consensus 114 ~~~~~~h~~~V~~v~~~~~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~-~~~i~vwd~ 189 (332)
+..+..+.....+..|+++++ .+++...++.|..|+.. +.. ..+... . .....+++++.++.+.. ++.|..|+.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 344445556677889999998 67788888999999974 443 233222 2 23456777888776665 478999986
Q ss_pred ccCCCCCeeEEE--ecC-CCCCceeEEEcCCCCEEEE----EcC-------------CCeEEEEEccCCeEeEEeeecCC
Q 020021 190 RKYEKGPFDIFS--VGG-DISDANVVKFSNDGRLMLL----TTM-------------EGHIHVLDSFRGTLLSTYNVKPV 249 (332)
Q Consensus 190 ~~~~~~~~~~~~--~~~-~~~~v~~v~~s~dg~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~ 249 (332)
. +.+..+. ..+ ....++.++++|+|+++++ +.. .+.|+.+|..+++......
T Consensus 115 ~----g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~---- 186 (305)
T 3dr2_A 115 D----GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMAD---- 186 (305)
T ss_dssp T----SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEE----
T ss_pred C----CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEec----
Confidence 3 2222221 111 1134678999999998886 332 3578888876665433221
Q ss_pred CCCcceEEEECCCCCEEEEEcCC------CcEEEEECCCCceEE---Ee-cCCCCCCceEEeCCCeeEEEeccceEEEec
Q 020021 250 SRNSTLEASFSPEGMFVISGSGD------GSVYAWSVRSGKEVA---SW-MSFDTEPPVIKWTPGSLMFVTGSSELSFWI 319 (332)
Q Consensus 250 ~~~~~~~v~~spdg~~l~sgs~D------g~i~vWd~~~~~~~~---~~-~~~~~~v~~l~~sp~~~~l~t~~~d~~~w~ 319 (332)
......++|+||++.|+.+... +.|++|++..+. +. .+ ......+..+++.++|++.++....+.+|+
T Consensus 187 -~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~~ 264 (305)
T 3dr2_A 187 -LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVFD 264 (305)
T ss_dssp -ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEEC
T ss_pred -CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEEC
Confidence 1234568999999988777665 689999987543 22 11 112344677999999998887766688899
Q ss_pred ccccccccc
Q 020021 320 PDLSKLGAY 328 (332)
Q Consensus 320 ~~~~~~~~~ 328 (332)
++.+.++.+
T Consensus 265 ~~g~~~~~~ 273 (305)
T 3dr2_A 265 SDGQLLGHI 273 (305)
T ss_dssp TTSCEEEEE
T ss_pred CCCCEEEEE
Confidence 877666554
No 224
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.12 E-value=6.2e-07 Score=81.97 Aligned_cols=202 Identities=8% Similarity=-0.021 Sum_probs=127.6
Q ss_pred cccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEE-eCC--EEEEEECccCCCCCe
Q 020021 121 HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVA-FGG--YIRMFDARKYEKGPF 197 (332)
Q Consensus 121 ~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~i~vwd~~~~~~~~~ 197 (332)
-.....++|+++++.+++...++.|+.||..++...........+...+++++..+.++ .++ .|.+++...... .
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~--~ 207 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWA--P 207 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTC--E
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCce--e
Confidence 34678999999999888888889999999988776554433222335667766544444 433 788888653221 1
Q ss_pred eEE-Ee-cCCCCCceeEEEcC-CCCEEEEEcCCCeEEEEEccCCeEeEEeee--cCCCCCcc-e-EEEECCC-CCEEEEE
Q 020021 198 DIF-SV-GGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNV--KPVSRNST-L-EASFSPE-GMFVISG 269 (332)
Q Consensus 198 ~~~-~~-~~~~~~v~~v~~s~-dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~~~~-~-~v~~spd-g~~l~sg 269 (332)
... .. .........++++| +|.+++ +..++.|+.||..++... .+.. ........ . .++|+|+ ++++++-
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVT-LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEE-EEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEE-EEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 111 11 11234567899999 566555 667889999998876532 2210 11111122 2 8999994 7777777
Q ss_pred cCCCcEEEEECCCCceEEEecCCC---------------CCCceEEeCCCeeEEEecc-ce--EEEecccccccccc
Q 020021 270 SGDGSVYAWSVRSGKEVASWMSFD---------------TEPPVIKWTPGSLMFVTGS-SE--LSFWIPDLSKLGAY 328 (332)
Q Consensus 270 s~Dg~i~vWd~~~~~~~~~~~~~~---------------~~v~~l~~sp~~~~l~t~~-~d--~~~w~~~~~~~~~~ 328 (332)
..++.|+.|+... + +..+..+. ..+..++|+|+++++++.. .. ++.|++....+..+
T Consensus 286 ~~~~~I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 286 QNLSSVYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp TTTTEEEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEE
Confidence 7889999999753 3 33333221 2357899999999888866 44 66677433344333
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.11 E-value=1.7e-08 Score=86.25 Aligned_cols=215 Identities=9% Similarity=0.041 Sum_probs=144.3
Q ss_pred cccceeEeccCCC--cEEEEEECCCCCEEEEEeC--CCcEEEEEcCCCeeeEEeeeccc-ceeEEEEccCCCEEEEecCC
Q 020021 23 SMEVGMSFRDYNG--RISSMDFHKSSSYLVTASD--DESIRLYDVTAATCLKTINSKKY-GVDLVCFTSHPTTVIYSSKN 97 (332)
Q Consensus 23 ~~~~~~~l~~h~~--~I~~i~~s~dg~~l~tgs~--D~tv~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~s~~ 97 (332)
+.+.++++. |.. ....+.|++|+.+.++.+. +.+|++.|+.+++.+.++.-... ....+++ ++..++.+..
T Consensus 8 ~~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~- 83 (266)
T 2iwa_A 8 IVEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVW- 83 (266)
T ss_dssp EEEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEET-
T ss_pred CceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEe-
Confidence 455666664 443 3689999998866666654 68999999999999988753221 2223444 3556666643
Q ss_pred CCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEE
Q 020021 98 GWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFA 177 (332)
Q Consensus 98 g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (332)
.++.+.++|.++.+.+.++.--... ...+++|+++++.+..+++|.+.|.++.+....+.....
T Consensus 84 -~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~------------- 147 (266)
T 2iwa_A 84 -LKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYN------------- 147 (266)
T ss_dssp -TCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEET-------------
T ss_pred -cCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCC-------------
Confidence 4789999999999888877522111 233566777666666788999999988765544432110
Q ss_pred EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC--------
Q 020021 178 VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV-------- 249 (332)
Q Consensus 178 ~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------- 249 (332)
+ . .....+.+.+. +|+.++....++.|.+.|..+++.+..+.....
T Consensus 148 ----~--------------~-------p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~ 201 (266)
T 2iwa_A 148 ----G--------------H-------RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEG 201 (266)
T ss_dssp ----T--------------E-------ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTT
T ss_pred ----C--------------c-------ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCccccccccc
Confidence 0 0 00123456666 787777777889999999999999888865311
Q ss_pred --CCCcceEEEECCCCC-EEEEEcCCCcEEEEECCCC
Q 020021 250 --SRNSTLEASFSPEGM-FVISGSGDGSVYAWSVRSG 283 (332)
Q Consensus 250 --~~~~~~~v~~spdg~-~l~sgs~Dg~i~vWd~~~~ 283 (332)
.......++|+|+++ +++++.....+++.++.+.
T Consensus 202 ~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 202 FRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 012346799999975 6666667788998888654
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.11 E-value=2.4e-08 Score=97.27 Aligned_cols=267 Identities=15% Similarity=0.102 Sum_probs=161.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeeEEeeecccc----------e-eEEEEccCCCEEEEecCCCCCceeEEEEccCCceE
Q 020021 46 SSYLVTASDDESIRLYDVTAATCLKTINSKKYG----------V-DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (332)
Q Consensus 46 g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~ 114 (332)
+..|..++.++.|.-+|..+|+.+-.+...... + ..+++ .+..++.++. |+.+..+|.++|+.+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~---dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAW---DGRLIALDAATGKEV 151 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECT---TSEEEEEETTTCCEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcC---CCEEEEEECCCCCEE
Confidence 567777888999999999999998776543210 0 11222 3456666643 788999999999998
Q ss_pred EEeecc-c----ccEEEEEecCCCCeEEEeeC------CCcEEEEeCCCceEEEEEEecCc-------------------
Q 020021 115 RYFKGH-H----DRVVSLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLRVQGR------------------- 164 (332)
Q Consensus 115 ~~~~~h-~----~~V~~v~~~~~~~~l~s~s~------Dg~i~iWd~~~~~~~~~~~~~~~------------------- 164 (332)
..+..+ . ..+.+.-.- .+..++.++. |+.|..+|.++++.+-.+.....
T Consensus 152 W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~ 230 (677)
T 1kb0_A 152 WHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWD 230 (677)
T ss_dssp EEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSC
T ss_pred eeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccc
Confidence 887755 1 122211111 2344554443 79999999999988766543211
Q ss_pred ---------------eeEEEcCCC-eEEEEEeCC-------------------EEEEEECccCCCCCeeEEEecCC----
Q 020021 165 ---------------PAAAYDDQG-LVFAVAFGG-------------------YIRMFDARKYEKGPFDIFSVGGD---- 205 (332)
Q Consensus 165 ---------------~~~~~~~~~-~~~~~~~~~-------------------~i~vwd~~~~~~~~~~~~~~~~~---- 205 (332)
....+++.. .++....++ .|..+|.++.+. .-.+....+
T Consensus 231 ~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~--~W~~~~~~~d~wd 308 (677)
T 1kb0_A 231 PSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKY--KWHYQETPGDNWD 308 (677)
T ss_dssp GGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE--EEEEESSTTCCSC
T ss_pred ccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCE--EEEEecCCCcccc
Confidence 123455544 344333232 478888765421 112222222
Q ss_pred ---CCCceeEEEcCCC---CEEEEEcCCCeEEEEEccCCeEeEEeeecCCC--------CCc------------------
Q 020021 206 ---ISDANVVKFSNDG---RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS--------RNS------------------ 253 (332)
Q Consensus 206 ---~~~v~~v~~s~dg---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------~~~------------------ 253 (332)
......+....+| ..++.++.+|.++++|..+|+++-.+...+.. ..+
T Consensus 309 ~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~ 388 (677)
T 1kb0_A 309 YTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPG 388 (677)
T ss_dssp CCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSC
T ss_pred cccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcC
Confidence 1122333444578 67889999999999999999988665432111 000
Q ss_pred ------ceEEEECCCCCEEEEEcC-------------------------------------------CCcEEEEECCCCc
Q 020021 254 ------TLEASFSPEGMFVISGSG-------------------------------------------DGSVYAWSVRSGK 284 (332)
Q Consensus 254 ------~~~v~~spdg~~l~sgs~-------------------------------------------Dg~i~vWd~~~~~ 284 (332)
-..++|+|++..++.... .|.|+.||+.+++
T Consensus 389 ~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~ 468 (677)
T 1kb0_A 389 PYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK 468 (677)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE
T ss_pred cccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCc
Confidence 014689999888877643 2789999999999
Q ss_pred eEEEecCCCCCCceEEeCCCeeEEEeccce--EEEeccc
Q 020021 285 EVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 321 (332)
Q Consensus 285 ~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~ 321 (332)
.+..... ..++....+.+++.++..++.| +..|+..
T Consensus 469 ~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 469 AAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp EEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred EEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 8776543 3334444455555555555544 6666653
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.10 E-value=1.3e-07 Score=85.04 Aligned_cols=260 Identities=9% Similarity=0.021 Sum_probs=151.4
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeeEEeeecc---------cceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEE
Q 020021 46 SSYLVTASDDESIRLYDVTAATCLKTINSKK---------YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRY 116 (332)
Q Consensus 46 g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~ 116 (332)
+..+..++.++.|..+|..+|+.+-.+.... ..+. ......+..++.++. ++.+..+|.++++.+..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~~~---~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLS-GGVTVSGGHVYIGSE---KAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEE-EEEEEETTEEEEEET---TSEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccc-cCceEeCCEEEEEcC---CCEEEEEECCCCCEEEE
Confidence 5688888899999999999999886655421 1121 122223455666543 67899999999998766
Q ss_pred eecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCce-------eEEEcCCCeEEEEEeCCEEEEEEC
Q 020021 117 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP-------AAAYDDQGLVFAVAFGGYIRMFDA 189 (332)
Q Consensus 117 ~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~vwd~ 189 (332)
............. .+..++.++.++.+..+|.++++........... .... .++.++.+..++.+..+|.
T Consensus 129 ~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 129 TKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT-AFGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp EECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE-ETTEEEECCTTTEEEEEET
T ss_pred EeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE-ECCEEEEEcCCCEEEEEEC
Confidence 6543221111111 2457888889999999999998876655443211 1111 2455665556788999997
Q ss_pred ccCCCCCeeEEEecCCCC-----CceeEEEcC--CCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCC
Q 020021 190 RKYEKGPFDIFSVGGDIS-----DANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 262 (332)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~-----~v~~v~~s~--dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spd 262 (332)
.+.+. .-......... .+..+..+| .+..+..++.++.+..+|..+|+.+-.... ....... .+
T Consensus 206 ~tG~~--~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~-----~~~~~~~--~~ 276 (376)
T 3q7m_A 206 EQGQM--IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL-----GSVNDFI--VD 276 (376)
T ss_dssp TTCCE--EEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC-----CCEEEEE--EE
T ss_pred CCCcE--EEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC-----CCCCCce--EE
Confidence 65321 11111111000 000000111 245566777899999999999987654432 1122222 35
Q ss_pred CCEEEEEcCCCcEEEEECCCCceEEEecCC-CCCCceEEeCCCeeEEEec-cceEEEecccc
Q 020021 263 GMFVISGSGDGSVYAWSVRSGKEVASWMSF-DTEPPVIKWTPGSLMFVTG-SSELSFWIPDL 322 (332)
Q Consensus 263 g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~-~~~v~~l~~sp~~~~l~t~-~~d~~~w~~~~ 322 (332)
+..++.++.++.++.+|..+++.+...... .......... ++.+++.. ...+..+++..
T Consensus 277 ~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 277 GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY-NGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE-TTEEEEECTTSEEEEEETTT
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE-CCEEEEEeCCCeEEEEECCC
Confidence 677778888999999999999987665422 2222233332 33333332 23366666543
No 228
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.09 E-value=1.7e-08 Score=98.74 Aligned_cols=219 Identities=13% Similarity=0.141 Sum_probs=134.2
Q ss_pred cceeEEEEccCCCEEEEecCC-CC-CceeEEEEccCCceEEEeecccccE--EEEEecCCCCeEEEeeCCCc--------
Q 020021 77 YGVDLVCFTSHPTTVIYSSKN-GW-DESLRLLSLHDNKYLRYFKGHHDRV--VSLSLCSSKDCFISGSLDRT-------- 144 (332)
Q Consensus 77 ~~v~~~~~~~~~~~~~~~s~~-g~-d~~v~v~d~~~~~~~~~~~~h~~~V--~~v~~~~~~~~l~s~s~Dg~-------- 144 (332)
..+..++|+|+++.++++... |. ..+|+++|+++++.+.. +...+ ..++|+ |++.|+.++.|..
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~---~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET---PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE---EEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc---ccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 356778999999998876532 32 26899999999986543 22333 578899 9999999988854
Q ss_pred -----EEEEeCCCceE--EEEEEecC-----ceeEEEcCCCeEEEEEe-----CCEEEEEECccCCCCCeeEEEecCCCC
Q 020021 145 -----VLLWDQRAEKC--QGLLRVQG-----RPAAAYDDQGLVFAVAF-----GGYIRMFDARKYEKGPFDIFSVGGDIS 207 (332)
Q Consensus 145 -----i~iWd~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~-----~~~i~vwd~~~~~~~~~~~~~~~~~~~ 207 (332)
|++|++.++.. ...+.... .....+++++..+.... .+.|.++|+..... ....+. .+..
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~-~~~~l~--~~~~ 281 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA-PLLTVQ--GDLD 281 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC-CCEEEE--CSSS
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC-ceEEEe--CCCC
Confidence 99999876542 12222222 22455677776544332 25899999865432 222222 2222
Q ss_pred CceeEEEcCCCCEEEEEc-C---CCeEEEEEccCCeE--eEEeeecCCCCCcceEEEECCCCCEEEEEcCCC---cEEEE
Q 020021 208 DANVVKFSNDGRLMLLTT-M---EGHIHVLDSFRGTL--LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG---SVYAW 278 (332)
Q Consensus 208 ~v~~v~~s~dg~~l~~~~-~---dg~i~i~d~~~~~~--~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg---~i~vW 278 (332)
..... ++++|..++..+ . .+.|..+|+.++.. ...+. + +...+. .|+|++++|+....++ .|++|
T Consensus 282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~--~-~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI--P-ERQQVL--TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--C-CCSSCE--EEEEETTEEEEEEEETTEEEEEEE
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe--c-CCCCEE--EEEEECCEEEEEEEECCeeEEEEE
Confidence 23333 667766555443 3 36899999887653 22332 1 222233 8999999888776544 78999
Q ss_pred ECCCCceEEEec-CCCCCCceEEeCCCeeEEE
Q 020021 279 SVRSGKEVASWM-SFDTEPPVIKWTPGSLMFV 309 (332)
Q Consensus 279 d~~~~~~~~~~~-~~~~~v~~l~~sp~~~~l~ 309 (332)
|+..+ ....+. ...+.+..++++|++..+.
T Consensus 356 d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~ 386 (693)
T 3iuj_A 356 DYEGK-RVREVALPGLGSVSGFNGKHDDPALY 386 (693)
T ss_dssp CTTSC-EEEEECCSSSSEEEECCCCTTCSCEE
T ss_pred ECCCC-eeEEeecCCCceEEeeecCCCCCEEE
Confidence 98744 444442 2334455677788875443
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.09 E-value=2.8e-07 Score=83.95 Aligned_cols=222 Identities=11% Similarity=0.100 Sum_probs=139.0
Q ss_pred cCCCEEEEecCCCCCceeEEEEccCC----ceEEEee-------cccccEEEEEecCCCCeEEEeeCC------CcEEEE
Q 020021 86 SHPTTVIYSSKNGWDESLRLLSLHDN----KYLRYFK-------GHHDRVVSLSLCSSKDCFISGSLD------RTVLLW 148 (332)
Q Consensus 86 ~~~~~~~~~s~~g~d~~v~v~d~~~~----~~~~~~~-------~h~~~V~~v~~~~~~~~l~s~s~D------g~i~iW 148 (332)
.+.++++..+. .++.|.+.|+++. +..+++. .-...-..+...|+| .++|+..+ +.+.+.
T Consensus 93 ~~r~~l~v~~l--~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGL--RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBT--TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccC--CCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEE
Confidence 55667776653 3688999999765 4555552 011234567788999 77877666 789999
Q ss_pred eCCCceEEEEEEecCce-----eEEEcCCCeEEEEEe--------------------CCEEEEEECccCCCCCeeEEEec
Q 020021 149 DQRAEKCQGLLRVQGRP-----AAAYDDQGLVFAVAF--------------------GGYIRMFDARKYEKGPFDIFSVG 203 (332)
Q Consensus 149 d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--------------------~~~i~vwd~~~~~~~~~~~~~~~ 203 (332)
|.++.+.+........+ ..-+++++.++.++. +++|.+||+...+ ....+.++
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~vg 247 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTLG 247 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEESC
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEecC
Confidence 99998888777543222 144566666555553 6899999997531 22233332
Q ss_pred CCCCCceeEEE--cCCCCEEEEEc------CCCeEEEEEccCCeEeE--EeeecCC------C---------CCcceEEE
Q 020021 204 GDISDANVVKF--SNDGRLMLLTT------MEGHIHVLDSFRGTLLS--TYNVKPV------S---------RNSTLEAS 258 (332)
Q Consensus 204 ~~~~~v~~v~~--s~dg~~l~~~~------~dg~i~i~d~~~~~~~~--~~~~~~~------~---------~~~~~~v~ 258 (332)
..-.....+.| +|+|+++.++. .+++|.+|....++... .+..... . .+....+.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 11112334445 99998876665 56788877665553221 1111110 0 13456789
Q ss_pred ECCCCCEEEEEcC-CCcEEEEECCCC---ceEEEecCC--------------CCCCceEEeCCCeeEEEecc
Q 020021 259 FSPEGMFVISGSG-DGSVYAWSVRSG---KEVASWMSF--------------DTEPPVIKWTPGSLMFVTGS 312 (332)
Q Consensus 259 ~spdg~~l~sgs~-Dg~i~vWd~~~~---~~~~~~~~~--------------~~~v~~l~~sp~~~~l~t~~ 312 (332)
+||||++|+.+.. .+.|.++|+.+. +.+..+..- ......+.++|||++|..+.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999988754 679999998632 344443221 01367899999998766554
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.08 E-value=4e-08 Score=83.21 Aligned_cols=203 Identities=11% Similarity=0.116 Sum_probs=136.1
Q ss_pred hcccceeEeccCCCc--EEEEEECCCCCEEEEEeCCC--cEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCC
Q 020021 22 QSMEVGMSFRDYNGR--ISSMDFHKSSSYLVTASDDE--SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN 97 (332)
Q Consensus 22 ~~~~~~~~l~~h~~~--I~~i~~s~dg~~l~tgs~D~--tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 97 (332)
...+.++++. |... ...|.|+ ++.++.+.+.++ +|+.+|+.+++.++.+.... ......+.+.+..++...
T Consensus 29 ~~~~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~lt-- 103 (262)
T 3nol_A 29 YDYQIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLT-- 103 (262)
T ss_dssp EEEEEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEE--
T ss_pred cceEEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEE--
Confidence 4566777784 4433 5789998 677888888876 99999999999998876533 222222333455666553
Q ss_pred CCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEE
Q 020021 98 GWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFA 177 (332)
Q Consensus 98 g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (332)
..++.+.++|.++.+.+.++.--. .+..++++++.|+....+..|.++|.++.+....+....
T Consensus 104 w~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~-------------- 166 (262)
T 3nol_A 104 WKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA-------------- 166 (262)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEE--------------
T ss_pred eeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc--------------
Confidence 347899999999999888876422 223344667766666567889999998877655543210
Q ss_pred EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCC-------
Q 020021 178 VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS------- 250 (332)
Q Consensus 178 ~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------- 250 (332)
++ . ....++.+.+. +|++++..-.++.|.++|..+|+++..+......
T Consensus 167 ---~g------------~---------~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~ 221 (262)
T 3nol_A 167 ---HG------------E---------ELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLP 221 (262)
T ss_dssp ---TT------------E---------ECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCC
T ss_pred ---CC------------c---------cccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcccccccc
Confidence 00 0 00123345554 7888877778889999999999999888753211
Q ss_pred --CCcceEEEECCCCCEEEEEcC
Q 020021 251 --RNSTLEASFSPEGMFVISGSG 271 (332)
Q Consensus 251 --~~~~~~v~~spdg~~l~sgs~ 271 (332)
....+.+||+|+++.|+..+.
T Consensus 222 ~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 222 SPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SSCCCEEEEEEETTTTEEEEEET
T ss_pred CcCCceEEEEEcCCCCEEEEECC
Confidence 123467999998776666654
No 231
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.08 E-value=3.8e-07 Score=82.02 Aligned_cols=228 Identities=14% Similarity=0.105 Sum_probs=141.2
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccE
Q 020021 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRV 124 (332)
Q Consensus 45 dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V 124 (332)
++..+..++.|+.|..+|..+|+.+............... .+..++.++. ++.+..+|.++++.+..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~---~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTS---NGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECT---TSEEEEEETTTCCEEEEEECCC---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcC---CCeEEEEECCCCcEEEEEeCCCCce
Confidence 3567778889999999999999988666543221111111 1335555543 6789999999998877665432211
Q ss_pred -----EEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCce------------eEEEcCCCeEEEEEeCCEEEEE
Q 020021 125 -----VSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP------------AAAYDDQGLVFAVAFGGYIRMF 187 (332)
Q Consensus 125 -----~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~i~vw 187 (332)
..... .+..++.++.++.+..+|.++++........... ......++.++.++.++.+..+
T Consensus 177 ~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~ 254 (376)
T 3q7m_A 177 SLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTAL 254 (376)
T ss_dssp --CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEE
T ss_pred eecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEE
Confidence 11111 2457788888999999999988876555432110 0011124566666678899999
Q ss_pred ECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEE
Q 020021 188 DARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 267 (332)
Q Consensus 188 d~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~ 267 (332)
|.++.+. .+... ........ .++..+..++.++.+..+|..+|+.+-..... .......... .+..|+
T Consensus 255 d~~tG~~----~w~~~--~~~~~~~~--~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~~~~~~~~--~~~~l~ 322 (376)
T 3q7m_A 255 DLRSGQI----MWKRE--LGSVNDFI--VDGNRIYLVDQNDRVMALTIDGGVTLWTQSDL--LHRLLTSPVL--YNGNLV 322 (376)
T ss_dssp ETTTCCE----EEEEC--CCCEEEEE--EETTEEEEEETTCCEEEEETTTCCEEEEECTT--TTSCCCCCEE--ETTEEE
T ss_pred ECCCCcE----Eeecc--CCCCCCce--EECCEEEEEcCCCeEEEEECCCCcEEEeeccc--CCCcccCCEE--ECCEEE
Confidence 9865421 12211 11222222 34566777778999999999999876544311 1111111122 356788
Q ss_pred EEcCCCcEEEEECCCCceEEEecC
Q 020021 268 SGSGDGSVYAWSVRSGKEVASWMS 291 (332)
Q Consensus 268 sgs~Dg~i~vWd~~~~~~~~~~~~ 291 (332)
.++.+|.++++|..+++.+.....
T Consensus 323 v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 323 VGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp EECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEeCCCeEEEEECCCCcEEEEEec
Confidence 888999999999999998776654
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.03 E-value=4.4e-07 Score=82.66 Aligned_cols=223 Identities=13% Similarity=0.130 Sum_probs=138.7
Q ss_pred CCCCEE-EEEeCCCcEEEEEcCCC----eeeEEeee-------cccceeEEEEccCCCEEEEecCC---CCCceeEEEEc
Q 020021 44 KSSSYL-VTASDDESIRLYDVTAA----TCLKTINS-------KKYGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSL 108 (332)
Q Consensus 44 ~dg~~l-~tgs~D~tv~iwd~~~~----~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~s~~---g~d~~v~v~d~ 108 (332)
+++++| +++..+.+|.++|+.+. +..++++. .....+-+.+.|++ .++++..+ +..+.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 777665 66778899999999755 55566631 11123446677888 33332211 12368999999
Q ss_pred cCCceEEEeec--cc-ccEEEEEecCCCCeEEEee-------------------CCCcEEEEeCCCceEEEEEEecC---
Q 020021 109 HDNKYLRYFKG--HH-DRVVSLSLCSSKDCFISGS-------------------LDRTVLLWDQRAEKCQGLLRVQG--- 163 (332)
Q Consensus 109 ~~~~~~~~~~~--h~-~~V~~v~~~~~~~~l~s~s-------------------~Dg~i~iWd~~~~~~~~~~~~~~--- 163 (332)
++++.+..+.- .. ..-..+-|+|+++.++|.. .+.+|.+||+.+++....+.+..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99998888762 22 1123467799999999886 36899999999888777776631
Q ss_pred cee-E--EEcCCCeEEE--EE-----eCCEEEEEECccCCCCCeeE---EEecCC----------------CCCceeEEE
Q 020021 164 RPA-A--AYDDQGLVFA--VA-----FGGYIRMFDARKYEKGPFDI---FSVGGD----------------ISDANVVKF 214 (332)
Q Consensus 164 ~~~-~--~~~~~~~~~~--~~-----~~~~i~vwd~~~~~~~~~~~---~~~~~~----------------~~~v~~v~~ 214 (332)
.+. . .+++++.++. .. .+++|.+|.... +.+.. +.+... ......+.+
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~---g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED---GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET---TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC---CceeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 111 1 2367664333 33 446776654432 11111 101100 124577899
Q ss_pred cCCCCEEEEE-cCCCeEEEEEcc---CCeEeEEeeecCC---------C--CCcceEEEECCCCCEEEEEc
Q 020021 215 SNDGRLMLLT-TMEGHIHVLDSF---RGTLLSTYNVKPV---------S--RNSTLEASFSPEGMFVISGS 270 (332)
Q Consensus 215 s~dg~~l~~~-~~dg~i~i~d~~---~~~~~~~~~~~~~---------~--~~~~~~v~~spdg~~l~sgs 270 (332)
|+||++|.++ -..+.|.+||+. +.+++........ . ......+++||||++|+.+.
T Consensus 329 S~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 329 SLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999877555 567899999975 3355554443210 0 01235689999999999987
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.02 E-value=4.3e-08 Score=83.05 Aligned_cols=205 Identities=10% Similarity=0.078 Sum_probs=135.6
Q ss_pred HHHHhcccceeEeccCCCc--EEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEec
Q 020021 18 EEILQSMEVGMSFRDYNGR--ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS 95 (332)
Q Consensus 18 ~~~~~~~~~~~~l~~h~~~--I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 95 (332)
+++....+.++++. |... ...|.|+. +.+..+.+.++.|+++|+.+++.++.+ -.. ........+.+..++...
T Consensus 37 ~~~~~~~~Vv~~~p-hd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g~~Ly~lt 112 (268)
T 3nok_A 37 EPVRRVAHIIREYP-HATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDGERLYQLT 112 (268)
T ss_dssp CCEEEEEEEEEEEE-CCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECSSCEEEEE
T ss_pred CccccceEEEEEEc-CCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeCCEEEEEE
Confidence 44555567777774 4433 57899984 677889999999999999999998887 322 222222333555665553
Q ss_pred CCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeE
Q 020021 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLV 175 (332)
Q Consensus 96 ~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (332)
..++.+.++|.++.+.+.++.-- ..-+++ +++++.|+.+..++.|.++|.++.+....+.....
T Consensus 113 --w~~~~v~V~D~~Tl~~~~ti~~~-~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~----------- 176 (268)
T 3nok_A 113 --WTEGLLFTWSGMPPQRERTTRYS-GEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR----------- 176 (268)
T ss_dssp --SSSCEEEEEETTTTEEEEEEECS-SCCCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEET-----------
T ss_pred --ccCCEEEEEECCcCcEEEEEeCC-CceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC-----------
Confidence 34789999999999988887642 222334 45677777666788999999988776555432110
Q ss_pred EEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC------
Q 020021 176 FAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV------ 249 (332)
Q Consensus 176 ~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------ 249 (332)
+ . ....++.+.+. +|++++..-.++.|.+.|..+|+++..+.....
T Consensus 177 ------g--------------~-------~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~ 228 (268)
T 3nok_A 177 ------G--------------Q-------PVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAG 228 (268)
T ss_dssp ------T--------------E-------ECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTT
T ss_pred ------C--------------c-------ccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccc
Confidence 0 0 00123445555 788777777888999999999999988765311
Q ss_pred ----CCCcceEEEECCCCCEEEEEc
Q 020021 250 ----SRNSTLEASFSPEGMFVISGS 270 (332)
Q Consensus 250 ----~~~~~~~v~~spdg~~l~sgs 270 (332)
.....+.+|++|+++.|+..+
T Consensus 229 ~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 229 QVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccCcCCceEEEEEcCCCCEEEEeC
Confidence 112446799999765444443
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.02 E-value=1.5e-08 Score=91.19 Aligned_cols=213 Identities=8% Similarity=-0.121 Sum_probs=133.2
Q ss_pred eeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEee----------CCCcEEEEeCCCceEEEEEEec---------
Q 020021 102 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS----------LDRTVLLWDQRAEKCQGLLRVQ--------- 162 (332)
Q Consensus 102 ~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s----------~Dg~i~iWd~~~~~~~~~~~~~--------- 162 (332)
++.+.|..+++.+..+..-..+ .+.++||+++++.+. .+++|.+||..+.+....+..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7889999999999888765566 799999999887775 4789999999999998888764
Q ss_pred CceeEEEcCCCeEEEEEe---CCEEEE--EECccCCCCCeeEEEecCC-----CCCceeEEE------------------
Q 020021 163 GRPAAAYDDQGLVFAVAF---GGYIRM--FDARKYEKGPFDIFSVGGD-----ISDANVVKF------------------ 214 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~---~~~i~v--wd~~~~~~~~~~~~~~~~~-----~~~v~~v~~------------------ 214 (332)
......+++++..+.++. .+.+.+ +|... .......+. ...-..+++
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-----v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-----DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-----EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-----ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 123567788886665553 357888 88754 001111000 000000111
Q ss_pred -------------------cCCCCEEEEEcCCCeEEEEEccCCe--EeEEeeecC-----C--CCCcceEEEECCCCCEE
Q 020021 215 -------------------SNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNVKP-----V--SRNSTLEASFSPEGMFV 266 (332)
Q Consensus 215 -------------------s~dg~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~-----~--~~~~~~~v~~spdg~~l 266 (332)
++++..++..+. +.+.+.|..... .+..+.... . .......++|+||++.+
T Consensus 200 ~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~l 278 (368)
T 1mda_H 200 GIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGI 278 (368)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEE
T ss_pred CeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEE
Confidence 333443344444 677777765432 222221100 0 00011126899999888
Q ss_pred EEEcC---------CCcEEEEECCCCceEEEecCCCCCCceEEeCCCee-EEEecc---ceEEEeccccc
Q 020021 267 ISGSG---------DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGS---SELSFWIPDLS 323 (332)
Q Consensus 267 ~sgs~---------Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~t~~---~d~~~w~~~~~ 323 (332)
+.+.. ++.+.++|+.+.+.+..+.... ....|+|+||++ ++++.. .++.+++....
T Consensus 279 yV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 279 MILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred EEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 86532 2356699999998888765433 578999999996 455543 45888887543
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.00 E-value=1.6e-07 Score=91.67 Aligned_cols=268 Identities=16% Similarity=0.159 Sum_probs=158.3
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeeEEeeecccc----------e-eEEEEccCCCEEEEecCCCCCceeEEEEccCCceE
Q 020021 46 SSYLVTASDDESIRLYDVTAATCLKTINSKKYG----------V-DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (332)
Q Consensus 46 g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~ 114 (332)
+..+..++.++.|..+|..+|+.+-.+...... + ..++. .+..++.++. |+.+..+|.++|+.+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~---dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVL---DGRLEAIDAKTGQRA 144 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECT---TSEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEcc---CCEEEEEECCCCCEe
Confidence 567778888999999999999998776543210 0 01111 3446666643 789999999999988
Q ss_pred EEeecc--cccEEEEEecC---CCCeEEEee-----CCCcEEEEeCCCceEEEEEEec-Cc-------------------
Q 020021 115 RYFKGH--HDRVVSLSLCS---SKDCFISGS-----LDRTVLLWDQRAEKCQGLLRVQ-GR------------------- 164 (332)
Q Consensus 115 ~~~~~h--~~~V~~v~~~~---~~~~l~s~s-----~Dg~i~iWd~~~~~~~~~~~~~-~~------------------- 164 (332)
..+... ......+..+| ++..++..+ .|+.|..||.++++.+-.+... ..
T Consensus 145 W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 145 WSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp EEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred eeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence 776542 11111111122 444444332 3799999999999987665421 00
Q ss_pred -------------eeEEEcCCC-eEEEEEeCC-------------------EEEEEECccCCCCCeeEEEecCCC-----
Q 020021 165 -------------PAAAYDDQG-LVFAVAFGG-------------------YIRMFDARKYEKGPFDIFSVGGDI----- 206 (332)
Q Consensus 165 -------------~~~~~~~~~-~~~~~~~~~-------------------~i~vwd~~~~~~~~~~~~~~~~~~----- 206 (332)
....+++.. .++....++ .|..+|.++.+. .-.+....+.
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~--~W~~~~~~~d~wd~~ 302 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEY--VWHYQTTPGDAWDYT 302 (689)
T ss_dssp STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCE--EEEEESSTTCCSCCC
T ss_pred ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCce--eEeeecCCccccccc
Confidence 023455543 444433343 388888875431 1122221111
Q ss_pred --CCceeEEEcCCCC---EEEEEcCCCeEEEEEccCCeEeEEeeecCCC-------------------------------
Q 020021 207 --SDANVVKFSNDGR---LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS------------------------------- 250 (332)
Q Consensus 207 --~~v~~v~~s~dg~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------------------------- 250 (332)
.......+..+|+ .++.++.+|.++++|..+|+++.........
T Consensus 303 ~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~ 382 (689)
T 1yiq_A 303 ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVT 382 (689)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEES
T ss_pred CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeC
Confidence 1111122233665 7888999999999999999987443321100
Q ss_pred -----CCcceEEEECCCCCEEEEEcC---------------------------------------------CCcEEEEEC
Q 020021 251 -----RNSTLEASFSPEGMFVISGSG---------------------------------------------DGSVYAWSV 280 (332)
Q Consensus 251 -----~~~~~~v~~spdg~~l~sgs~---------------------------------------------Dg~i~vWd~ 280 (332)
...-..++|+|+...++..+. +|.|+.||+
T Consensus 383 p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~ 462 (689)
T 1yiq_A 383 PAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP 462 (689)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET
T ss_pred CCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEEC
Confidence 000112689999888887632 478999999
Q ss_pred CCCceEEEecCCCCCCceEEeCCCeeEEEeccce--EEEeccc
Q 020021 281 RSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 321 (332)
Q Consensus 281 ~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d--~~~w~~~ 321 (332)
.+++.+.....+. +...-.+...+.++..++.| ++.|+..
T Consensus 463 ~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 463 VKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp TTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECC
Confidence 9999887765443 23333445555555556655 6666654
No 236
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.00 E-value=1.1e-07 Score=84.16 Aligned_cols=194 Identities=9% Similarity=0.030 Sum_probs=120.1
Q ss_pred cEEEEEecCCC-CeEEEeeCCCcEEEEeCCCceEEEEEEecC-ceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEE
Q 020021 123 RVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIF 200 (332)
Q Consensus 123 ~V~~v~~~~~~-~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~ 200 (332)
...+..|+|++ ..+++...++.|..||..+++.. .+..+. .....+++++.++.+. ...|.+||.... .+..+
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g---~~~~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISDSKQLIAS-DDGLFLRDTATG---VLTLH 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEE-TTEEEEEETTTC---CEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEE-CCCEEEEECCCC---cEEEE
Confidence 34567889974 46667777899999999877643 233332 2334556677666554 556999997543 22222
Q ss_pred Eec-C--CCCCceeEEEcCCCCEEEEEcC------CCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEE-Ec
Q 020021 201 SVG-G--DISDANVVKFSNDGRLMLLTTM------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS-GS 270 (332)
Q Consensus 201 ~~~-~--~~~~v~~v~~s~dg~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~s-gs 270 (332)
... . ....++.++++|+|+++++... .+.|..+| +++...... .......++|+|||+.|+. .+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~----~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA----DISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE----EESSEEEEEECTTSCEEEEEET
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC----CCcccCCeEEcCCCCEEEEEEC
Confidence 111 1 1124678999999998776542 25677776 455432211 1123457899999987654 45
Q ss_pred CCCcEEEEECC--CC-ce-----EEEecCCCCCCceEEeCCCeeEEEec--cceEEEeccccccccc
Q 020021 271 GDGSVYAWSVR--SG-KE-----VASWMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIPDLSKLGA 327 (332)
Q Consensus 271 ~Dg~i~vWd~~--~~-~~-----~~~~~~~~~~v~~l~~sp~~~~l~t~--~~d~~~w~~~~~~~~~ 327 (332)
.++.|.+||+. ++ +. ...+......+..+++.++|++.++. ...+..|+++.+.+..
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~ 265 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIAR 265 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEE
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEE
Confidence 67899999986 55 31 22222233445779999999877775 3458888886544443
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.99 E-value=9.6e-08 Score=83.93 Aligned_cols=259 Identities=13% Similarity=0.112 Sum_probs=154.5
Q ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce
Q 020021 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (332)
Q Consensus 34 ~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~ 113 (332)
...+.++.+.++|.+.+ ++.+ |..+|. +++.+..+...........+. ...++.++. ++.+..+|.+ ++.
T Consensus 59 ~~~~~~~~~~~~g~l~v-~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~---~~~l~~~d~~-g~~ 128 (330)
T 3hxj_A 59 EIIECRPSIGKDGTIYF-GSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSM---DGHLYAINTD-GTE 128 (330)
T ss_dssp GEEEECCEETTTTEECC-SSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECT---TSEEEEECTT-SCE
T ss_pred CCcccceEEecCCcEEE-ecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEec---CCEEEEEcCC-CCE
Confidence 34467777777776554 4444 888886 565544433322222222232 445555543 5678899988 776
Q ss_pred EEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC--ceeEEEcCCCeEEEEEeCCEEEEEECcc
Q 020021 114 LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQGLVFAVAFGGYIRMFDARK 191 (332)
Q Consensus 114 ~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~vwd~~~ 191 (332)
+.....+...+.++...+++. +..++.++.+..+|.. ++....+.... ......+.++.++.++ +.+..+| ..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~ 203 (330)
T 3hxj_A 129 KWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PD 203 (330)
T ss_dssp EEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TT
T ss_pred EEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CC
Confidence 666665555555666666665 5567788999999988 66554444332 2233444566665555 7788888 33
Q ss_pred CCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcC
Q 020021 192 YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 271 (332)
Q Consensus 192 ~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~ 271 (332)
.. ..+........+.++.+.++|.+.+ ++.++.+..+|. +++.+..+... ......+.+.++++ |..++.
T Consensus 204 g~----~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~-~g~~~~~~~~~---~~~~~~~~~~~~g~-l~v~t~ 273 (330)
T 3hxj_A 204 GT----EKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINP-DGTEKWRFKTG---KRIESSPVIGNTDT-IYFGSY 273 (330)
T ss_dssp SC----EEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEECT-TSCEEEEEECS---SCCCSCCEECTTSC-EEEECT
T ss_pred Cc----EEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEECC-CCCEeEEeeCC---CCccccceEcCCCe-EEEecC
Confidence 21 1222222224567778888887655 556778888884 56655444422 12223345555665 555777
Q ss_pred CCcEEEEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccceEEEe
Q 020021 272 DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFW 318 (332)
Q Consensus 272 Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d~~~w 318 (332)
+|.+..+|. +++.+..+......+.++...+++++++.........
T Consensus 274 ~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~ 319 (330)
T 3hxj_A 274 DGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYA 319 (330)
T ss_dssp TCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEE
T ss_pred CCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEE
Confidence 888999996 6777666554455677888888888777665543333
No 238
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.99 E-value=2.9e-07 Score=86.60 Aligned_cols=233 Identities=11% Similarity=0.029 Sum_probs=147.3
Q ss_pred CCCEEEEecCCCCCceeEEEEccCCceEEEeecc-cccEEEEEe-c-CCCCeEEEee------------------CCCcE
Q 020021 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH-HDRVVSLSL-C-SSKDCFISGS------------------LDRTV 145 (332)
Q Consensus 87 ~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h-~~~V~~v~~-~-~~~~~l~s~s------------------~Dg~i 145 (332)
++++++.... .+..|.+.|+.+.++.+.+.-- .....++++ + |++++++.++ .++++
T Consensus 100 DG~~lfVnd~--~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDK--ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEET--TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CCCEEEEEcC--CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 6666766543 3678999999999987755321 234678887 5 8888887774 35689
Q ss_pred EEEeCCCceEEEEEEecCce-eEEEcCCCeEEEEEe-C--------------------------------------CEEE
Q 020021 146 LLWDQRAEKCQGLLRVQGRP-AAAYDDQGLVFAVAF-G--------------------------------------GYIR 185 (332)
Q Consensus 146 ~iWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~--------------------------------------~~i~ 185 (332)
.+.|..+.+....+...+.+ ....++++..+.++. + +.|.
T Consensus 178 tvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999998887777664433 344555554433332 2 1356
Q ss_pred EEECccCCCCC-eeEEEecCCCCCceeEEEcCCCCEEEEEc-CCCeEEEEEccCCe------------EeEEeeecCCCC
Q 020021 186 MFDARKYEKGP-FDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGT------------LLSTYNVKPVSR 251 (332)
Q Consensus 186 vwd~~~~~~~~-~~~~~~~~~~~~v~~v~~s~dg~~l~~~~-~dg~i~i~d~~~~~------------~~~~~~~~~~~~ 251 (332)
+.|.+...... ......+ .....+.+||||+++++++ .+.+|.++|..+.+ ...+.. ..
T Consensus 258 VID~~~~~~~~~~~~Ipvg---~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~----vG 330 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIA---NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE----LG 330 (595)
T ss_dssp EEECSGGGCCSSEEEEEEE---SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB----CC
T ss_pred EEeCcccCCceeEEEEecC---CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC----CC
Confidence 66665421112 2223332 1346789999999776664 67899999998642 222222 12
Q ss_pred CcceEEEECCCCCEEEEEcCCCcEEEEECCC----------CceEEEecCCCCC-----CceEEeCCCeeEEEecc---c
Q 020021 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRS----------GKEVASWMSFDTE-----PPVIKWTPGSLMFVTGS---S 313 (332)
Q Consensus 252 ~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~----------~~~~~~~~~~~~~-----v~~l~~sp~~~~l~t~~---~ 313 (332)
....-++|+|||+...+.-.|+.|.+||+.+ .+.+.++..|-.+ -..+.++|||++|.+.. .
T Consensus 331 ~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~sk 410 (595)
T 1fwx_A 331 LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSK 410 (595)
T ss_dssp SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCT
T ss_pred CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCc
Confidence 2345689999995555668899999999977 3445555544321 12345689999887753 3
Q ss_pred e-E-----------EEecccccccccc
Q 020021 314 E-L-----------SFWIPDLSKLGAY 328 (332)
Q Consensus 314 d-~-----------~~w~~~~~~~~~~ 328 (332)
| . ++.+....++..+
T Consensus 411 dr~~~~gp~~~~~~ql~dis~~~m~lv 437 (595)
T 1fwx_A 411 DRFLNVGPLKPENDQLIDISGDKMVLV 437 (595)
T ss_dssp TSSCCCCSSCCEEEEEEECSSSSCEEE
T ss_pred cccccCCCCCCCcceEEEcCCCcEEEE
Confidence 4 2 6777665555443
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.97 E-value=7.1e-06 Score=70.01 Aligned_cols=247 Identities=12% Similarity=0.045 Sum_probs=146.8
Q ss_pred EEEEEeCCCcEEEEEcCCCeee-----EEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccc
Q 020021 48 YLVTASDDESIRLYDVTAATCL-----KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHD 122 (332)
Q Consensus 48 ~l~tgs~D~tv~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~ 122 (332)
+|+.+.. +.|+.+|++..... ..+.........+++.+.+..++++.. .++.|..+++..+.....+.....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI--SEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET--TTTEEEEEESSSCCCEEEECTTCC
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC--CCCEEEEEecCCCCcEEEEECCCC
Confidence 4444443 36788887754321 112222234567889988888877753 257899999876554333333335
Q ss_pred cEEEEEecCCCC-eEEEeeCCCcEEEEeCCCceEEEEEEec--CceeEEEcC-CCeEEEEEe---CCEEEEEECccCCCC
Q 020021 123 RVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQ--GRPAAAYDD-QGLVFAVAF---GGYIRMFDARKYEKG 195 (332)
Q Consensus 123 ~V~~v~~~~~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~---~~~i~vwd~~~~~~~ 195 (332)
...++++.+++. ..++-...+.|.++++............ ......+++ .+.++.+.. .+.|..+++....
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-- 157 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-- 157 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC--
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC--
Confidence 678999998654 5556566788999998654322222111 223456666 455554443 3578888764211
Q ss_pred CeeEEEecCCCCCceeEEEcCCCC-EEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCc
Q 020021 196 PFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS 274 (332)
Q Consensus 196 ~~~~~~~~~~~~~v~~v~~s~dg~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~ 274 (332)
...+. .......+.++++|++. ++++....+.|..+|........... . ......++.. ++..+++....+.
T Consensus 158 -~~~~~-~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~---~-~~~P~gi~~d-~~~lyva~~~~~~ 230 (267)
T 1npe_A 158 -RRILA-QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE---G-LQYPFAVTSY-GKNLYYTDWKTNS 230 (267)
T ss_dssp -CEEEE-CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE---C-CCSEEEEEEE-TTEEEEEETTTTE
T ss_pred -cEEEE-ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec---C-CCCceEEEEe-CCEEEEEECCCCe
Confidence 11111 11223457899999765 55666777899999987543332222 1 1222355553 3444444455689
Q ss_pred EEEEECCCCceEEEecCCC-CCCceEEeCCCee
Q 020021 275 VYAWSVRSGKEVASWMSFD-TEPPVIKWTPGSL 306 (332)
Q Consensus 275 i~vWd~~~~~~~~~~~~~~-~~v~~l~~sp~~~ 306 (332)
|.++|..+++.+..+.... ..+..+++.|++.
T Consensus 231 v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 231 VIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 9999999998888775433 2467888888864
No 240
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.93 E-value=6.2e-07 Score=75.25 Aligned_cols=203 Identities=11% Similarity=0.102 Sum_probs=132.1
Q ss_pred hcccceeEeccCC--CcEEEEEECCCCCEEEEEeCCC--cEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCC
Q 020021 22 QSMEVGMSFRDYN--GRISSMDFHKSSSYLVTASDDE--SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN 97 (332)
Q Consensus 22 ~~~~~~~~l~~h~--~~I~~i~~s~dg~~l~tgs~D~--tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 97 (332)
...+.++.+ .|. .-...+.|++ +.+..+.+.++ +|+.+|+.+++.++.+..... .....+...+..++...
T Consensus 7 ~~~~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~lt-- 81 (243)
T 3mbr_X 7 QGYRVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLT-- 81 (243)
T ss_dssp CCEEEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEE--
T ss_pred cceEEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEE--
Confidence 345666777 455 3467999987 66778888764 999999999999988754332 11122223355555553
Q ss_pred CCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEE
Q 020021 98 GWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFA 177 (332)
Q Consensus 98 g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (332)
..++.+.++|.++.+.+.++.--. .=.++ +++++.|+.+..++.|.++|.++.+....+.....
T Consensus 82 w~~~~v~v~D~~tl~~~~ti~~~~-~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~------------- 145 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTPRARFRYPG-EGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAG------------- 145 (243)
T ss_dssp SSSSEEEEEETTTTEEEEEEECSS-CCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEET-------------
T ss_pred eeCCEEEEEECCcCcEEEEEeCCC-CceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccC-------------
Confidence 347899999999999888876432 22344 45666666555688999999988776555432110
Q ss_pred EEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC--------
Q 020021 178 VAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV-------- 249 (332)
Q Consensus 178 ~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------- 249 (332)
+ . ....++.+.+. +|++++..-.+..|.+.|..+|+++..+.....
T Consensus 146 ----g--------------~-------~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~ 199 (243)
T 3mbr_X 146 ----G--------------R-------PLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALT 199 (243)
T ss_dssp ----T--------------E-------ECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCC
T ss_pred ----C--------------c-------ccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcccccccc
Confidence 0 0 00112334443 778777777788999999999999988875421
Q ss_pred --CCCcceEEEECCCCCEEEEEcC
Q 020021 250 --SRNSTLEASFSPEGMFVISGSG 271 (332)
Q Consensus 250 --~~~~~~~v~~spdg~~l~sgs~ 271 (332)
.....+.+|++|+++.|+..+.
T Consensus 200 ~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 200 DSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCcCCceEEEEEcCCCCEEEEECC
Confidence 1123467999998665555543
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.91 E-value=2.6e-07 Score=86.91 Aligned_cols=245 Identities=8% Similarity=0.059 Sum_probs=158.4
Q ss_pred EEEEE---CCCCCEEEEEe-CCCcEEEEEcCCCeeeEEeeec-ccceeEEEE-c-cCCCEEEEecC--------------
Q 020021 38 SSMDF---HKSSSYLVTAS-DDESIRLYDVTAATCLKTINSK-KYGVDLVCF-T-SHPTTVIYSSK-------------- 96 (332)
Q Consensus 38 ~~i~~---s~dg~~l~tgs-~D~tv~iwd~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~~~~~s~-------------- 96 (332)
-.+++ .+||+++.... .+.+|-+-|+.+.++.+.+.-. ......+++ + |++.+++.++.
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~ 169 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 169 (595)
T ss_dssp EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc
Confidence 34555 25888875555 4567999999999998855321 124667776 4 88888877631
Q ss_pred -CCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCCC--------------------------------
Q 020021 97 -NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR-------------------------------- 143 (332)
Q Consensus 97 -~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg-------------------------------- 143 (332)
+..++.+.+.|.++.+....+.--. .-..++++|+|+++++.+.+.
T Consensus 170 ~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~G 248 (595)
T 1fwx_A 170 VANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAG 248 (595)
T ss_dssp GGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHT
T ss_pred ccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCC
Confidence 1235689999999988776654211 235678899999888887553
Q ss_pred ------cEEEEeCCC--ceE-EEEEEec-CceeEEEcCCCeEEEEEe--CCEEEEEECccCCC---CC----eeEE-Eec
Q 020021 144 ------TVLLWDQRA--EKC-QGLLRVQ-GRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEK---GP----FDIF-SVG 203 (332)
Q Consensus 144 ------~i~iWd~~~--~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~i~vwd~~~~~~---~~----~~~~-~~~ 203 (332)
.|.+.|.++ ++. ...+... ....+.+++++.++.++. +++|.++|+.+.+. +. .... ...
T Consensus 249 k~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 249 DYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp CSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred CeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC
Confidence 477777776 333 3344333 233567788888777664 58999999885310 00 0011 110
Q ss_pred CCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccC----------CeEeEEeeecCC--CCCcceEEEECCCCCEEEEEc-
Q 020021 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR----------GTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGS- 270 (332)
Q Consensus 204 ~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~~~~--~~~~~~~v~~spdg~~l~sgs- 270 (332)
.-....-++|+|||..+++...++.|..||+.+ .+.+..+..+.. |......+.++|||++|++..
T Consensus 329 -vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 329 -LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp -CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred -CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 012456789999997778889999999999876 456666554321 111122345789999999983
Q ss_pred --CCCc----------EEEEECCCCc
Q 020021 271 --GDGS----------VYAWSVRSGK 284 (332)
Q Consensus 271 --~Dg~----------i~vWd~~~~~ 284 (332)
.|+- -.++|++.++
T Consensus 408 ~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 408 FSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred CCccccccCCCCCCCcceEEEcCCCc
Confidence 3553 2889996655
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.90 E-value=1.1e-07 Score=83.55 Aligned_cols=258 Identities=13% Similarity=0.130 Sum_probs=154.1
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEee
Q 020021 39 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK 118 (332)
Q Consensus 39 ~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~ 118 (332)
++.++.++. |..++.++.|..|| .+++.+..+......+..+...+++ .++.++ ++ +..+|. +++.+..+.
T Consensus 24 ~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t----~~-l~~~d~-~g~~~~~~~ 94 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDG-TIYFGS----DK-VYAINP-DGTEKWRFD 94 (330)
T ss_dssp CCEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTT-EECCSS----CE-EEEECC-CGGGGGGSC
T ss_pred CceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCC-cEEEec----Cc-EEEECC-CCcEEEEEE
Confidence 344556664 55577889999999 8888766554433333444444444 344333 33 777775 554433332
Q ss_pred cccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCc--eeEEEcCCCeEEEEEeCCEEEEEECccCCCCC
Q 020021 119 GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDDQGLVFAVAFGGYIRMFDARKYEKGP 196 (332)
Q Consensus 119 ~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~ 196 (332)
..........+. +..+..++.++.+..+|.. ++.......... ......+++.++.+..++.+..+|.. .+ .
T Consensus 95 ~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~--~ 168 (330)
T 3hxj_A 95 TKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GT--E 168 (330)
T ss_dssp C-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SC--E
T ss_pred CCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CC--E
Confidence 222222222333 4567778889999999987 655444433221 22344556777766667899999875 21 1
Q ss_pred eeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEE
Q 020021 197 FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVY 276 (332)
Q Consensus 197 ~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~ 276 (332)
...+.. ....+..+.+.++|.+++.. +.+..+| .+++.+..+.. ....+..++..++|+.++ ++.++.+.
T Consensus 169 ~~~~~~--~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~---~~~~~~~~~~~~~g~l~v-~t~~~gl~ 238 (330)
T 3hxj_A 169 KWRFKT--NDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYA---GYWTVTRPAISEDGTIYV-TSLDGHLY 238 (330)
T ss_dssp EEEEEC--SSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECC---SSCCCSCCEECTTSCEEE-EETTTEEE
T ss_pred eEEEec--CCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEcc---CCcceeceEECCCCeEEE-EcCCCeEE
Confidence 112222 22345667777888866554 8899999 67776554432 224456677888886655 55678899
Q ss_pred EEECCCCceEEEecCCCCCCceEEeCCCeeEEEeccc-eEEEecccc
Q 020021 277 AWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS-ELSFWIPDL 322 (332)
Q Consensus 277 vWd~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~-d~~~w~~~~ 322 (332)
.+|. +++.+..+......+..+...+++++.+.... .+..++++.
T Consensus 239 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g 284 (330)
T 3hxj_A 239 AINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPDG 284 (330)
T ss_dssp EECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECTTS
T ss_pred EECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECCCC
Confidence 9984 56666665544444566777777776665544 577777643
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.84 E-value=4.3e-07 Score=77.56 Aligned_cols=191 Identities=14% Similarity=0.110 Sum_probs=127.7
Q ss_pred cEEEEEecCCCCeEEEeeC--CCcEEEEeCCCceEEEEEEecCce---eEEEcCCCeEEEEE-eCCEEEEEECccCCCCC
Q 020021 123 RVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGRP---AAAYDDQGLVFAVA-FGGYIRMFDARKYEKGP 196 (332)
Q Consensus 123 ~V~~v~~~~~~~~l~s~s~--Dg~i~iWd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~i~vwd~~~~~~~~ 196 (332)
...++.|++++...++.+. ++.|++.|+.+++....+.+...+ ..... ++.++.+. .++.+.++|..+.+ .
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~--v 98 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLS--N 98 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTE--E
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEecCCEEEEEECCCCc--E
Confidence 4678999998766666654 679999999999988777654322 22333 33444444 36899999987543 2
Q ss_pred eeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC--CCCcceEEEECCCCCEEEEEcCCCc
Q 020021 197 FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGSGDGS 274 (332)
Q Consensus 197 ~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~~~~v~~spdg~~l~sgs~Dg~ 274 (332)
...+..+ .. ....+++||+.+.++..+++|+++|..+.+.+..+..... .......+.|. +|+.+++...++.
T Consensus 99 ~~~i~~g-~~---~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 99 IKNFTHQ-MK---DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EEEEECC-SS---SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred EEEEECC-CC---CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 2233333 11 1245777887666666789999999999888877664311 11234567787 7877776667889
Q ss_pred EEEEECCCCceEEEecCC-----------C--CCCceEEeCCCe-eEEEeccceEEEeccc
Q 020021 275 VYAWSVRSGKEVASWMSF-----------D--TEPPVIKWTPGS-LMFVTGSSELSFWIPD 321 (332)
Q Consensus 275 i~vWd~~~~~~~~~~~~~-----------~--~~v~~l~~sp~~-~~l~t~~~d~~~w~~~ 321 (332)
|.+.|..+++.+..+... . ...+.|+|+|++ ++++|+...-+++..+
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 999999999987776421 0 234789999986 5778876654444433
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.84 E-value=1.5e-05 Score=70.07 Aligned_cols=237 Identities=11% Similarity=0.099 Sum_probs=145.5
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeee--------------------cccceeEEEEccCCCEEEEec
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS--------------------KKYGVDLVCFTSHPTTVIYSS 95 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~~~~~s 95 (332)
...+++++++|+++.++..++.|..||..+++.. .+.. ....+..+++.+....++.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 3457789999987888889999999998765432 2221 012356678886334555553
Q ss_pred CCCCCceeEEEEccCCceEEEeec-----ccccEEEEEecC-CCCeEEEeeC-----------------CCcEEEEeCCC
Q 020021 96 KNGWDESLRLLSLHDNKYLRYFKG-----HHDRVVSLSLCS-SKDCFISGSL-----------------DRTVLLWDQRA 152 (332)
Q Consensus 96 ~~g~d~~v~v~d~~~~~~~~~~~~-----h~~~V~~v~~~~-~~~~l~s~s~-----------------Dg~i~iWd~~~ 152 (332)
. .+.+..+|..++.. ..+.. .......+++.+ +|+..++-.. ++.|..+|..+
T Consensus 99 ~---~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 99 C---YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp T---TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred C---CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 2 23477778765432 22221 123467899999 8987776432 36788888876
Q ss_pred ceEEEEEE-ecCceeEEEcCCCeEEEEE--eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcC---
Q 020021 153 EKCQGLLR-VQGRPAAAYDDQGLVFAVA--FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM--- 226 (332)
Q Consensus 153 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~--- 226 (332)
++...... ........+++++..+.++ ..+.|..|++.....+....+.. ... ...+++.++|.++++...
T Consensus 175 ~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~~~~~~ 251 (322)
T 2fp8_A 175 KETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSSSEELD 251 (322)
T ss_dssp TEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEEEEETT
T ss_pred CEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEecCccc
Confidence 65433222 2233355677777544444 35799999986432223333221 112 567899999998887655
Q ss_pred -------CCeEEEEEccCCeEeEEeeecCCC-CCcceEEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 227 -------EGHIHVLDSFRGTLLSTYNVKPVS-RNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 227 -------dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
.+.|..+|. .++.+..+...... ...+..+++ .+++.+++....+.|.++++..
T Consensus 252 ~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 252 GNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp SSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred ccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 567899987 47777666543211 233445566 4677777766788899998854
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.81 E-value=5.6e-07 Score=76.18 Aligned_cols=182 Identities=13% Similarity=0.100 Sum_probs=123.4
Q ss_pred ccEEEEEecCCCCeEEEeeCCC--cEEEEeCCCceEEEEEEecCce---eEEEcCCCeEEEEE-eCCEEEEEECccCCCC
Q 020021 122 DRVVSLSLCSSKDCFISGSLDR--TVLLWDQRAEKCQGLLRVQGRP---AAAYDDQGLVFAVA-FGGYIRMFDARKYEKG 195 (332)
Q Consensus 122 ~~V~~v~~~~~~~~l~s~s~Dg--~i~iWd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~i~vwd~~~~~~~ 195 (332)
....++.|+ ++...+|.+.+| .|+..|+++++....+.++... ..... +..++.+. .++.+.++|..+.+
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~-g~~ly~ltw~~~~v~v~D~~t~~-- 118 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW-KDKIVGLTWKNGLGFVWNIRNLR-- 118 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTCC--
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe-CCEEEEEEeeCCEEEEEECccCc--
Confidence 345788998 677778888876 9999999999988877765432 12333 34444444 37899999987653
Q ss_pred CeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC--CCCcceEEEECCCCCEEEEEcCCC
Q 020021 196 PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGSGDG 273 (332)
Q Consensus 196 ~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~~~~v~~spdg~~l~sgs~Dg 273 (332)
....+...+ ....+++||+.+..+..+++|+++|..+.+.+.++..... .......+.|. +|+.++..-.+.
T Consensus 119 ~~~ti~~~~-----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~ 192 (262)
T 3nol_A 119 QVRSFNYDG-----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTN 192 (262)
T ss_dssp EEEEEECSS-----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred EEEEEECCC-----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCC
Confidence 223333322 2234556787776666688999999999988887764311 11223356675 787777776788
Q ss_pred cEEEEECCCCceEEEecCC------------CCCCceEEeCCCe-eEEEeccc
Q 020021 274 SVYAWSVRSGKEVASWMSF------------DTEPPVIKWTPGS-LMFVTGSS 313 (332)
Q Consensus 274 ~i~vWd~~~~~~~~~~~~~------------~~~v~~l~~sp~~-~~l~t~~~ 313 (332)
.|.+.|..+++.+..+... ..-.+.|+|+|++ ++++||-.
T Consensus 193 ~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 193 KIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred eEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 9999999999987765321 1234779999975 56677654
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.80 E-value=3.2e-05 Score=76.69 Aligned_cols=277 Identities=13% Similarity=0.176 Sum_probs=168.3
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEee-ecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEE
Q 020021 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 115 (332)
Q Consensus 37 I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~ 115 (332)
|.++..++++.+.+ +..++.+..||..+++...... .....|..+....++. +..+.. ++-+..+|..+++...
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt~---~~Gl~~~~~~~~~~~~ 249 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR-IWVATE---GAGLFLINPKTKEIKN 249 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE-EEEEEB---SSCEEEEETTTTEEEE
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC-EEEEEC---CCCeEEEeCCCCeEEE
Confidence 88888888887665 5655568999987766543211 1233466666655554 333332 2347888887765443
Q ss_pred Eeec-------ccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec---------CceeEEEcCCCeEEEEE
Q 020021 116 YFKG-------HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ---------GRPAAAYDDQGLVFAVA 179 (332)
Q Consensus 116 ~~~~-------h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~ 179 (332)
.... ....|.++...++|...+ |..+ -+.+||..++......... .......++++.+..+.
T Consensus 250 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt 327 (795)
T 4a2l_A 250 YLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGT 327 (795)
T ss_dssp ECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEE
T ss_pred eecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEE
Confidence 3222 135699998888776544 4444 5788998776644322111 11234455677777777
Q ss_pred eCCEEEEEECccCCCCCeeEEEec-----CCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeec-----CC
Q 020021 180 FGGYIRMFDARKYEKGPFDIFSVG-----GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK-----PV 249 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~~~~~~~~-----~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~ 249 (332)
.++-|..|+.... .+..+... .....|.++...++|.+.+ |+.++-+..||..+++...-.... ..
T Consensus 328 ~~~Gl~~~~~~~~---~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l 403 (795)
T 4a2l_A 328 YFGGLNYYHPIRN---RFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGI 403 (795)
T ss_dssp SSSCEEEECGGGG---SSEEECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CC
T ss_pred CCCCeEEeCCCcc---cceEEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCC
Confidence 7778888875432 22222211 0123578888888888655 666667888998766543221110 12
Q ss_pred CCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecC-----CCCCCceEEeCCCeeEEEeccceEEEecccccc
Q 020021 250 SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMS-----FDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSK 324 (332)
Q Consensus 250 ~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~-----~~~~v~~l~~sp~~~~l~t~~~d~~~w~~~~~~ 324 (332)
..+.+.+++..++|+.|..|+.++-+.++|..+++.. .+.. ....|.++...+++++.+.....+.+++++..+
T Consensus 404 ~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 404 GSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRS 482 (795)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTE
T ss_pred CCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCe
Confidence 2356778888889984556777777999999876643 3321 234577888888888776655567778776544
Q ss_pred c
Q 020021 325 L 325 (332)
Q Consensus 325 ~ 325 (332)
.
T Consensus 483 ~ 483 (795)
T 4a2l_A 483 F 483 (795)
T ss_dssp E
T ss_pred E
Confidence 3
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.74 E-value=1.3e-06 Score=73.90 Aligned_cols=181 Identities=13% Similarity=0.051 Sum_probs=123.0
Q ss_pred ccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCce---eEEEcCCCeEEEEE-eCCEEEEEECccCCCCCe
Q 020021 122 DRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP---AAAYDDQGLVFAVA-FGGYIRMFDARKYEKGPF 197 (332)
Q Consensus 122 ~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~i~vwd~~~~~~~~~ 197 (332)
....++.|+ ++...++.+.+|.|+..|+++++....+ ++... ......+ .++.+. .++.+.+||..+.+ ..
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~--~~ 129 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQ--RE 129 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTE--EE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCc--EE
Confidence 345788887 4667788899999999999999987777 65432 2334333 444444 47899999987653 22
Q ss_pred eEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC--CCCcceEEEECCCCCEEEEEcCCCcE
Q 020021 198 DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGSGDGSV 275 (332)
Q Consensus 198 ~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~~~~v~~spdg~~l~sgs~Dg~i 275 (332)
..+...+. ...+++||+.+..+..+++|+++|..+.+.+.++..... .......+.|. +|+.++....+..|
T Consensus 130 ~ti~~~~e-----GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I 203 (268)
T 3nok_A 130 RTTRYSGE-----GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDV 203 (268)
T ss_dssp EEEECSSC-----CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEE
T ss_pred EEEeCCCc-----eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeE
Confidence 23333221 234457788777777799999999999998887764321 11233456665 88777766678899
Q ss_pred EEEECCCCceEEEecCC-------------CCCCceEEeCCCe-eEEEeccc
Q 020021 276 YAWSVRSGKEVASWMSF-------------DTEPPVIKWTPGS-LMFVTGSS 313 (332)
Q Consensus 276 ~vWd~~~~~~~~~~~~~-------------~~~v~~l~~sp~~-~~l~t~~~ 313 (332)
.+.|.++++.+..+... ..-.+.|+|+|++ ++++||-.
T Consensus 204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 99999999987765321 1234779999964 67787753
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.73 E-value=6.3e-06 Score=80.14 Aligned_cols=259 Identities=12% Similarity=0.110 Sum_probs=154.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeeEEeeecc----cceeEEEEccCCCEEEEecCC---CCCceeEEEEccCCceEEEee
Q 020021 46 SSYLVTASDDESIRLYDVTAATCLKTINSKK----YGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYFK 118 (332)
Q Consensus 46 g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~s~~---g~d~~v~v~d~~~~~~~~~~~ 118 (332)
+..++.++.|+.|..+|..+|+.+-.+.... ..+...-.. .+..++.+..+ +.++.+..+|.++|+.+..+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 4578888999999999999999987665421 111110000 13355555432 135789999999999887765
Q ss_pred cc---cc----------------------------cEEEEEecCCCCeEEEeeCCC-------------------cEEEE
Q 020021 119 GH---HD----------------------------RVVSLSLCSSKDCFISGSLDR-------------------TVLLW 148 (332)
Q Consensus 119 ~h---~~----------------------------~V~~v~~~~~~~~l~s~s~Dg-------------------~i~iW 148 (332)
.. .. ....+++.++.+.++.++.++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 21 00 011356777777887777665 39999
Q ss_pred eCCCceEEEEEEecCc---------eeEEE--cCCCe----EEEEEeCCEEEEEECccCCCC------Ce-eEEEec---
Q 020021 149 DQRAEKCQGLLRVQGR---------PAAAY--DDQGL----VFAVAFGGYIRMFDARKYEKG------PF-DIFSVG--- 203 (332)
Q Consensus 149 d~~~~~~~~~~~~~~~---------~~~~~--~~~~~----~~~~~~~~~i~vwd~~~~~~~------~~-~~~~~~--- 203 (332)
|.++++..-.++.... +.... ..++. ++.+..+|.+.++|.++.+.- +. -...+.
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~ 355 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccccc
Confidence 9999998777765311 11111 11232 444445788888887654310 00 000000
Q ss_pred --------------------CCC--CCceeEEEcCCCCEEEEE------------------------------------c
Q 020021 204 --------------------GDI--SDANVVKFSNDGRLMLLT------------------------------------T 225 (332)
Q Consensus 204 --------------------~~~--~~v~~v~~s~dg~~l~~~------------------------------------~ 225 (332)
+.. ..-..++++|+..++.+. .
T Consensus 356 g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 000 011236788876655432 1
Q ss_pred CCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCCC-ceEEeCCC
Q 020021 226 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPG 304 (332)
Q Consensus 226 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~v-~~l~~sp~ 304 (332)
.+|.|+.||+.+|+.+=...... ......+...+.+++.++.||.+++||..+++.+..+....... .-+.+..+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~----~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPT----HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESS----SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred ccceEEEEeCCCCcEEEEccCCC----CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEEC
Confidence 23789999999999875544321 12223444578889999999999999999999988775443211 23555566
Q ss_pred eeEEE
Q 020021 305 SLMFV 309 (332)
Q Consensus 305 ~~~l~ 309 (332)
|++.+
T Consensus 512 G~~yv 516 (668)
T 1kv9_A 512 GRQYV 516 (668)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 66443
No 249
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.69 E-value=0.00014 Score=72.09 Aligned_cols=272 Identities=11% Similarity=0.127 Sum_probs=167.6
Q ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeee--------cccceeEEEEccCCCEEEEecCCCCCceeEE
Q 020021 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS--------KKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (332)
Q Consensus 34 ~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v 105 (332)
...|.++..+++|++.+ |..++-|..||..++...+-... ....|..++..+++..+..+.. ++-+.+
T Consensus 356 ~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~---~~Gl~~ 431 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH---AGGLSI 431 (795)
T ss_dssp CSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET---TTEEEE
T ss_pred CCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC---cCceeE
Confidence 45699999999887665 77777899999887654432211 1234666776666653444442 345888
Q ss_pred EEccCCceEEEee----cccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe--------cCceeEEEcCCC
Q 020021 106 LSLHDNKYLRYFK----GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV--------QGRPAAAYDDQG 173 (332)
Q Consensus 106 ~d~~~~~~~~~~~----~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~--------~~~~~~~~~~~~ 173 (332)
+|.++++...... -+...|.++...++++..+.. .+ -+.+||..+++....... ........++++
T Consensus 432 ~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g 509 (795)
T 4a2l_A 432 LHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHK 509 (795)
T ss_dssp EETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTC
T ss_pred EeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCC
Confidence 9988776433221 134578998888877755544 44 478889877655432211 011233445667
Q ss_pred eEEEEEeCCEEEEEECccCCCCCeeEEEe-----cCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeee-c
Q 020021 174 LVFAVAFGGYIRMFDARKYEKGPFDIFSV-----GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV-K 247 (332)
Q Consensus 174 ~~~~~~~~~~i~vwd~~~~~~~~~~~~~~-----~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~ 247 (332)
.+..+.. +.+..||..... + .+.. ......+.++...++|.+.++.. . -+..||..+++.. .+.. .
T Consensus 510 ~lWigt~-~Gl~~~~~~~~~---~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~-~~~~~~ 581 (795)
T 4a2l_A 510 RLWIGGE-EGLSVFKQEGLD---I-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIK-RYNTTN 581 (795)
T ss_dssp CEEEEES-SCEEEEEEETTE---E-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEE-EECGGG
T ss_pred CEEEEeC-CceEEEeCCCCe---E-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEE-EeCCCC
Confidence 6666665 557778764321 1 1110 01123577888889999766554 3 5788898776543 2322 1
Q ss_pred CCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCCC----C--ceEEeCCCeeEEEeccceEEEeccc
Q 020021 248 PVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDTE----P--PVIKWTPGSLMFVTGSSELSFWIPD 321 (332)
Q Consensus 248 ~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~~----v--~~l~~sp~~~~l~t~~~d~~~w~~~ 321 (332)
....+.+.++...++|+..+++ . +-|..||..+++ +..+....+. + .++...++|++++.+...+..++|+
T Consensus 582 gl~~~~i~~i~~d~~g~lWi~t-~-~Gl~~~~~~~~~-~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~Gl~~~~p~ 658 (795)
T 4a2l_A 582 GLPNNVVYGILEDSFGRLWLST-N-RGISCFNPETEK-FRNFTESDGLQSNQFNTASYCRTSVGQMYFGGINGITTFRPE 658 (795)
T ss_dssp TCSCSCEEEEEECTTSCEEEEE-T-TEEEEEETTTTE-EEEECGGGTCSCSCEEEEEEEECTTSCEEEEETTEEEEECGG
T ss_pred CCchhheEEEEECCCCCEEEEc-C-CceEEEcCCCCc-EEEcCCcCCCccccCccCceeECCCCeEEEecCCceEEEcHH
Confidence 2234567778889999888776 3 458889987654 4444333221 1 3566788999888888778888775
Q ss_pred c
Q 020021 322 L 322 (332)
Q Consensus 322 ~ 322 (332)
.
T Consensus 659 ~ 659 (795)
T 4a2l_A 659 L 659 (795)
T ss_dssp G
T ss_pred H
Confidence 3
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.68 E-value=0.00011 Score=64.02 Aligned_cols=239 Identities=11% Similarity=0.033 Sum_probs=137.1
Q ss_pred ccceeEeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCC-ce
Q 020021 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD-ES 102 (332)
Q Consensus 24 ~~~~~~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d-~~ 102 (332)
.++...|... .....++++++|+++++-..++.|..||.... ....+.. ......+++.+++..++ +.. +.+ ..
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~-~~~p~gia~~~dG~l~v-ad~-~~~~~~ 96 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV-EGKVSGLAFTSNGDLVA-TGW-NADSIP 96 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC-SSEEEEEEECTTSCEEE-EEE-CTTSCE
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC-CCCceeEEEcCCCcEEE-Eec-cCCcce
Confidence 3444455433 45778999999998888778899999998753 3333322 23466788998887443 321 112 23
Q ss_pred eEEEEccCCceEEEee-cccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEE-EE------e--c--CceeEEEc
Q 020021 103 LRLLSLHDNKYLRYFK-GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL-LR------V--Q--GRPAAAYD 170 (332)
Q Consensus 103 v~v~d~~~~~~~~~~~-~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~-~~------~--~--~~~~~~~~ 170 (332)
+..+|..+++...... .....-..++..+++..+++-..++.|.++|...+..... .. . . ..+... +
T Consensus 97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-s 175 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-K 175 (306)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-E
T ss_pred EEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-C
Confidence 5556766766433222 1122234455455555566655688888888765422111 00 0 0 112222 4
Q ss_pred CCCe-EEEEE-eCCEEEEEECcc-CCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeec
Q 020021 171 DQGL-VFAVA-FGGYIRMFDARK-YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247 (332)
Q Consensus 171 ~~~~-~~~~~-~~~~i~vwd~~~-~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 247 (332)
+++. ++.+. ..+.|..+|+.. ........+... .....++++++|+++++....+.|.++|.. |+........
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~ 251 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE 251 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecc
Confidence 4443 33333 357899999763 111112222211 234568999999998888888999999975 6553221111
Q ss_pred CCCCCcceEEEEC---CCCCEEEEEcCCC
Q 020021 248 PVSRNSTLEASFS---PEGMFVISGSGDG 273 (332)
Q Consensus 248 ~~~~~~~~~v~~s---pdg~~l~sgs~Dg 273 (332)
.......+++|. ||++.|+.++..+
T Consensus 252 -~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 252 -QGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp -GTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred -cccCCceEEEEecccCCCCEEEEECCCC
Confidence 122456789998 8987777665543
No 251
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.66 E-value=6.1e-06 Score=80.10 Aligned_cols=270 Identities=10% Similarity=0.036 Sum_probs=148.4
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEEcCCCeeeE--Eeee-cccceeEEEEccCCCEEEEecCCCCCcee
Q 020021 39 SMDFHK-SSSYLVTASDDE-----------SIRLYDVTAATCLK--TINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (332)
Q Consensus 39 ~i~~s~-dg~~l~tgs~D~-----------tv~iwd~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~~~~~s~~g~d~~v 103 (332)
++++.+ ++.+++.|+.+. .+.+||..+++-.. .+.. +......+++..++..++++... +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~--~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND--AKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS--TTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCC--CCce
Confidence 455667 888888888654 58899998776432 2222 12223345667777777766432 3579
Q ss_pred EEEEccCCceEEEeecccccE-EEEEecCCCCeEEEee-CC-----CcEEEEeCCCceEEEEEE-----ecC-ceeEEEc
Q 020021 104 RLLSLHDNKYLRYFKGHHDRV-VSLSLCSSKDCFISGS-LD-----RTVLLWDQRAEKCQGLLR-----VQG-RPAAAYD 170 (332)
Q Consensus 104 ~v~d~~~~~~~~~~~~h~~~V-~~v~~~~~~~~l~s~s-~D-----g~i~iWd~~~~~~~~~~~-----~~~-~~~~~~~ 170 (332)
.+||..+++-...-.-+..+- .++.+.++++.++.|+ .+ .++.+||..++.....-. +.. .....+.
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 999998765433211111111 2345557899999998 45 579999998876543210 000 0000111
Q ss_pred CCC-eEEEEEe---------CCEEEEEECccCCCCCeeEEEecC-------CCCCceeEEEc-CCCCEEEEEcCCC----
Q 020021 171 DQG-LVFAVAF---------GGYIRMFDARKYEKGPFDIFSVGG-------DISDANVVKFS-NDGRLMLLTTMEG---- 228 (332)
Q Consensus 171 ~~~-~~~~~~~---------~~~i~vwd~~~~~~~~~~~~~~~~-------~~~~v~~v~~s-~dg~~l~~~~~dg---- 228 (332)
.++ .++.++. ...+..||.....- ........ ....-.++.|. .++++++.|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w--~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~ 425 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD--VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS 425 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE--EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcce--eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC
Confidence 222 2233322 24567788754320 11111000 00112334443 4788888888543
Q ss_pred -------eEEEEEccCCeEeEEeeecCCCCCc-ceEEEECCCCCEEEEEcCC-----------CcEEEEECCCCceEEEe
Q 020021 229 -------HIHVLDSFRGTLLSTYNVKPVSRNS-TLEASFSPEGMFVISGSGD-----------GSVYAWSVRSGKEVASW 289 (332)
Q Consensus 229 -------~i~i~d~~~~~~~~~~~~~~~~~~~-~~~v~~spdg~~l~sgs~D-----------g~i~vWd~~~~~~~~~~ 289 (332)
.|.+||..+.+-.... ....+... -...+..|+|+.++.|+.+ ..+.+||..+.+....-
T Consensus 426 ~~~~~~~~v~~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 426 DATTNAHIITLGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp BCCCCEEEEECCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred CcCCcceEEEcCCCCCCCeeEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 6778887765543221 01112222 2244667899999999865 46899999776543211
Q ss_pred -cCCCCC-CceEEeCCCeeEEEeccc
Q 020021 290 -MSFDTE-PPVIKWTPGSLMFVTGSS 313 (332)
Q Consensus 290 -~~~~~~-v~~l~~sp~~~~l~t~~~ 313 (332)
+.+... ..+..+.||++.++.|+.
T Consensus 505 ~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 505 PNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCccccccHhhcCCCcEEEecCCC
Confidence 112211 223456799999999874
No 252
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.65 E-value=6.8e-06 Score=68.90 Aligned_cols=182 Identities=14% Similarity=0.038 Sum_probs=121.3
Q ss_pred ccEEEEEecCCCCeEEEeeCCC--cEEEEeCCCceEEEEEEecCce---eEEEcCCCeEEEEE-eCCEEEEEECccCCCC
Q 020021 122 DRVVSLSLCSSKDCFISGSLDR--TVLLWDQRAEKCQGLLRVQGRP---AAAYDDQGLVFAVA-FGGYIRMFDARKYEKG 195 (332)
Q Consensus 122 ~~V~~v~~~~~~~~l~s~s~Dg--~i~iWd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~i~vwd~~~~~~~ 195 (332)
....++.|++ +....|.+.+| .|+..|+++++....+.++... ..... ++.++.+. .++.+.++|..+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~-- 96 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLT-- 96 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTE--
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCc--
Confidence 4466888886 56677777764 8999999999988877765442 22333 34444444 47899999987653
Q ss_pred CeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC--CCCcceEEEECCCCCEEEEEcCCC
Q 020021 196 PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGSGDG 273 (332)
Q Consensus 196 ~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~~~~v~~spdg~~l~sgs~Dg 273 (332)
....+...+ ....+.+|+..+.++..++.|+++|..+.+.+.++..... .....+.+.+. +|+.++..-.+.
T Consensus 97 ~~~ti~~~~-----~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~ 170 (243)
T 3mbr_X 97 PRARFRYPG-----EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTS 170 (243)
T ss_dssp EEEEEECSS-----CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTT
T ss_pred EEEEEeCCC-----CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCC
Confidence 222333322 1234556777666666789999999999988877764321 11233455553 777777666678
Q ss_pred cEEEEECCCCceEEEecCC------------C-CCCceEEeCCCe-eEEEeccc
Q 020021 274 SVYAWSVRSGKEVASWMSF------------D-TEPPVIKWTPGS-LMFVTGSS 313 (332)
Q Consensus 274 ~i~vWd~~~~~~~~~~~~~------------~-~~v~~l~~sp~~-~~l~t~~~ 313 (332)
.|.+.|..+++.+..+... . .-.+.|+|+|++ ++++||-.
T Consensus 171 ~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 171 RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 9999999999987765311 1 133779999964 67777754
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.65 E-value=5.4e-06 Score=80.60 Aligned_cols=191 Identities=17% Similarity=0.141 Sum_probs=112.4
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeeEEeeecccc----------e-eEEEEccCCCEEEEecCCCCCceeEEEEccCCceE
Q 020021 46 SSYLVTASDDESIRLYDVTAATCLKTINSKKYG----------V-DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (332)
Q Consensus 46 g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~ 114 (332)
+..+..++.++.|..+|..+|+.+-.+...... + ..+++ .+..++.++. |+.+..+|.++|+.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~---dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTL---DGRLIALDAKTGKAI 140 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECT---TSEEEEEETTTCCEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcC---CCEEEEEECCCCCEe
Confidence 567777888999999999999998776533210 0 01122 2345666543 788999999999988
Q ss_pred EEeeccc----ccEEEEEecCCCCeEEEeeC------CCcEEEEeCCCceEEEEEEec-Cc-------------------
Q 020021 115 RYFKGHH----DRVVSLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLRVQ-GR------------------- 164 (332)
Q Consensus 115 ~~~~~h~----~~V~~v~~~~~~~~l~s~s~------Dg~i~iWd~~~~~~~~~~~~~-~~------------------- 164 (332)
..+.... ..+.+--.-.++ .++.++. ++.|..+|.++++.+-.+... ..
T Consensus 141 W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 141 WSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 7765421 111110000133 4444432 689999999999987766531 10
Q ss_pred -------------eeEEEcCC-CeEEEEEeCC-------------------EEEEEECccCCCCCeeEEEecCCC-----
Q 020021 165 -------------PAAAYDDQ-GLVFAVAFGG-------------------YIRMFDARKYEKGPFDIFSVGGDI----- 206 (332)
Q Consensus 165 -------------~~~~~~~~-~~~~~~~~~~-------------------~i~vwd~~~~~~~~~~~~~~~~~~----- 206 (332)
....+++. +.++....++ .|..+|.++.+. .-.+....+.
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~--~W~~~~~~~~~wd~~ 297 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKL--AWHYQVTPGDSWDFT 297 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE--EEEEESSTTCCSCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCce--eeEeecCCCcccccc
Confidence 01345543 3444433333 377888765431 1122222111
Q ss_pred --CCceeEEEcCCCC---EEEEEcCCCeEEEEEccCCeEeEEe
Q 020021 207 --SDANVVKFSNDGR---LMLLTTMEGHIHVLDSFRGTLLSTY 244 (332)
Q Consensus 207 --~~v~~v~~s~dg~---~l~~~~~dg~i~i~d~~~~~~~~~~ 244 (332)
.+.....+..+|+ .++.++.+|.++++|..+|+++...
T Consensus 298 ~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 298 ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 1222223334775 6888999999999999999988443
No 254
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.62 E-value=1.2e-08 Score=92.21 Aligned_cols=227 Identities=12% Similarity=0.085 Sum_probs=109.6
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccc-eeEEEEccCCCEEEEecCCCCCceeEEEEccCCceE
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYG-VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~ 114 (332)
++.+..+.+++..+++++.|++|..||..+|+.+..+..+... +...-+...+..+++++ .|+.+..||.++|+.+
T Consensus 39 ~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~---~dg~v~a~D~~tG~~~ 115 (369)
T 2hz6_A 39 PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGK---KQDIWYVIDLLTGEKQ 115 (369)
T ss_dssp CSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCE---EEEEEEEECCC-----
T ss_pred CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEe---CCCEEEEEECCCCcEE
Confidence 4444445567778888899999999999999887666543211 11000011233344333 3788999999999988
Q ss_pred EEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcC----CCeEEEEEeCCEEEEEECc
Q 020021 115 RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDD----QGLVFAVAFGGYIRMFDAR 190 (332)
Q Consensus 115 ~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~vwd~~ 190 (332)
..+..+. ...++|++..+++++.|+.|..||.++++....+.........+.. ++.++.++.++.+..||.+
T Consensus 116 w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 116 QTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp ---------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred EEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccccCccccCCccccceEEEECCCCEEEEEECC
Confidence 7776654 2345678889999999999999999988765444322211112222 2567777778999999987
Q ss_pred cCCCCCeeEEEecCCCCCceeEEEcCCCCEEEE--EcCCCeEEEEEccCCe----EeEEeeecCCCCCcceEEEECC--C
Q 020021 191 KYEKGPFDIFSVGGDISDANVVKFSNDGRLMLL--TTMEGHIHVLDSFRGT----LLSTYNVKPVSRNSTLEASFSP--E 262 (332)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~--~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~~~v~~sp--d 262 (332)
+.+. .+........+....++++|...+. ...++.++.+|..+|+ .+-.+.. ...+ . +| .
T Consensus 192 tG~~----~W~~~~~~pv~~~~~~~~dg~~~v~~~~~~~~~l~~ld~~tG~~~~~~~W~~~~----~~~~---~-sp~~~ 259 (369)
T 2hz6_A 192 SGDV----LWIQNYASPVVAFYVWQREGLRKVMHINVAVETLRYLTFMSGEVGRITKWKYPF----PKET---E-AKSKL 259 (369)
T ss_dssp TCCE----EEEEECSSCEEEEEECTTSSCEEECCEEEEHHHHHHHHHHHHHHHHHHTSCCCC----CCHH---H-HHHHS
T ss_pred CCcE----EEEecCCCceEEEEEecCCceEeccceeecccceeeeehhcCCcccceeeeecc----Cccc---c-ccccc
Confidence 5431 2221111111233455667654211 0113456667765555 3221111 0111 0 11 3
Q ss_pred CCEEEEEcCCCcEEEEECC
Q 020021 263 GMFVISGSGDGSVYAWSVR 281 (332)
Q Consensus 263 g~~l~sgs~Dg~i~vWd~~ 281 (332)
+..|+.++.||.++.++..
T Consensus 260 ~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 260 TPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp EEEECBEECSSCEECCEEE
T ss_pred cceEEEecccCCEEecCcc
Confidence 4567778889999999875
No 255
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.62 E-value=0.00013 Score=62.07 Aligned_cols=220 Identities=7% Similarity=-0.006 Sum_probs=131.1
Q ss_pred CcEEEEEECCCCCE-EEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce
Q 020021 35 GRISSMDFHKSSSY-LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (332)
Q Consensus 35 ~~I~~i~~s~dg~~-l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~ 113 (332)
..+.+++++++++. +++-...+.|..+|.........+.........+++.+.+..++++.. ..+.|.++++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS--QLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC--CCCEEEEEEcCCCCE
Confidence 45779999997654 556666789999999765543333222235677889888777777653 256888988865432
Q ss_pred EEEeecccccEEEEEecCCCCeE-EEeeC--CCcEEEEeCCCceEEEEEEe--cCceeEEEcCCC-eEEEEE-eCCEEEE
Q 020021 114 LRYFKGHHDRVVSLSLCSSKDCF-ISGSL--DRTVLLWDQRAEKCQGLLRV--QGRPAAAYDDQG-LVFAVA-FGGYIRM 186 (332)
Q Consensus 114 ~~~~~~h~~~V~~v~~~~~~~~l-~s~s~--Dg~i~iWd~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~-~~~~i~v 186 (332)
.............+++.|++..| ++-.. .+.|..+++........... .......+++++ .++.+. ..+.|.+
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 22222222456899999965544 44433 36788887754322111111 112345666644 444333 3578999
Q ss_pred EECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCC
Q 020021 187 FDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 264 (332)
Q Consensus 187 wd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~ 264 (332)
+|...... ..... .. .....+++. ++.++++....+.|..+|..+++.+.++... .......+++.|++.
T Consensus 194 ~~~~g~~~--~~~~~-~~--~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g--~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 194 LNPAQPGR--RKVLE-GL--QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPH--KQTRLYGITIALSQC 263 (267)
T ss_dssp EETTEEEE--EEEEE-CC--CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCS--SCCCCCCEEEECSCC
T ss_pred EecCCCce--EEEec-CC--CCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccc--cccccceeeecCccC
Confidence 98753211 11111 11 123456654 5566666677899999999999988776532 112345678888875
No 256
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=0.0002 Score=70.70 Aligned_cols=278 Identities=11% Similarity=0.042 Sum_probs=166.5
Q ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeee----------cccceeEEEEccCCCEEEEecCCCCCcee
Q 020021 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS----------KKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (332)
Q Consensus 34 ~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~s~~g~d~~v 103 (332)
...|.+|..+++|.+-+ |..++-|..|+..++.... +.. ....|..++...++. +..+.. ++-+
T Consensus 312 ~~~v~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~---~~Gl 385 (781)
T 3v9f_A 312 NASARYIFQDSFNNIWI-GTWGGGINFISNAPPTFHT-WSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTD---GGGI 385 (781)
T ss_dssp SSCEEEEEECSSCCEEE-EEBSSCEEEECSSCCSCEE-EC----CCCSSCCSSSCEEEEEECTTSC-EEEEEB---SSCE
T ss_pred CCeEEEEEEeCCCCEEE-EecCCeEEEeCCCCCccee-eccCccccccCCCCCcceEEEEEcCCCC-EEEEeC---CCcE
Confidence 46799999999887664 6667788999887654322 211 123466666655554 444432 2347
Q ss_pred EEEEccCCceEEEe---ecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEE--ec--CceeEEEcCCCeEE
Q 020021 104 RLLSLHDNKYLRYF---KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--VQ--GRPAAAYDDQGLVF 176 (332)
Q Consensus 104 ~v~d~~~~~~~~~~---~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~--~~--~~~~~~~~~~~~~~ 176 (332)
..+|..++...... ......|.++...+++...+ |+.++-+..+|.++++...... .. .......++++.+.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lw 464 (781)
T 3v9f_A 386 NVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIW 464 (781)
T ss_dssp EEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEE
T ss_pred EEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEE
Confidence 77887654322111 12346788888777776444 6666678888887765432211 01 11223344566666
Q ss_pred EEEeCCEEEEEECccCCCCCeeEEEecC----CCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeee-cCCCC
Q 020021 177 AVAFGGYIRMFDARKYEKGPFDIFSVGG----DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV-KPVSR 251 (332)
Q Consensus 177 ~~~~~~~i~vwd~~~~~~~~~~~~~~~~----~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~ 251 (332)
.+.. +.+..+|..... +..+.... ....+.++...++|.+.+.....| +..+|..+++.. .+.. .....
T Consensus 465 igt~-~Gl~~~~~~~~~---~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~-~~~~~~~l~~ 538 (781)
T 3v9f_A 465 IGTH-AGVFVIDLASKK---VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVR-KFNQYEGFCS 538 (781)
T ss_dssp EEET-TEEEEEESSSSS---CCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEE-EECTTTTCSC
T ss_pred EEEC-CceEEEeCCCCe---EEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEE-EccCCCCCCC
Confidence 5555 678888865422 22222111 124577888899999766554445 677887766543 2321 12234
Q ss_pred CcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCC----CCCCceEEeCCCeeEEEeccceEEEecccccccc
Q 020021 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF----DTEPPVIKWTPGSLMFVTGSSELSFWIPDLSKLG 326 (332)
Q Consensus 252 ~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~----~~~v~~l~~sp~~~~l~t~~~d~~~w~~~~~~~~ 326 (332)
+.+.++...++|+..++.. +|-+..||..+++. ..+... ...+.++...++|++.+++...+..++++..+..
T Consensus 539 ~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~~~~ 615 (781)
T 3v9f_A 539 NTINQIYRSSKGQMWLATG-EGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFY 615 (781)
T ss_dssp SCEEEEEECTTSCEEEEET-TEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEECSSCEEEEETTTTEEE
T ss_pred CeeEEEEECCCCCEEEEEC-CCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEcCCceEEEECCCCceE
Confidence 5677888889998877654 67558999877653 333211 2357788889999888887777888887755443
No 257
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.55 E-value=0.00027 Score=67.39 Aligned_cols=259 Identities=15% Similarity=0.176 Sum_probs=148.3
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeeEEeeeccc----cee--EEEEcc--CCC-EEEEecCC---CCCceeEEEEccCCce
Q 020021 46 SSYLVTASDDESIRLYDVTAATCLKTINSKKY----GVD--LVCFTS--HPT-TVIYSSKN---GWDESLRLLSLHDNKY 113 (332)
Q Consensus 46 g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~----~v~--~~~~~~--~~~-~~~~~s~~---g~d~~v~v~d~~~~~~ 113 (332)
+..++.++.|+.|..+|..+|+.+-....... .+. -+.... +++ .++.++.. +.++.+..+|.++|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45777888999999999999998866543221 111 011111 122 44444321 2367899999999998
Q ss_pred EEEeecccccE-----------------------------------------EEEEecCCCCeEEEeeC-----------
Q 020021 114 LRYFKGHHDRV-----------------------------------------VSLSLCSSKDCFISGSL----------- 141 (332)
Q Consensus 114 ~~~~~~h~~~V-----------------------------------------~~v~~~~~~~~l~s~s~----------- 141 (332)
+.........+ ...++.+...++..+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 76543211000 01344455555554432
Q ss_pred ---------C----CcEEEEeCCCceEEEEEEecCc---------eeEEEc---CCC----eEEEEEeCCEEEEEECccC
Q 020021 142 ---------D----RTVLLWDQRAEKCQGLLRVQGR---------PAAAYD---DQG----LVFAVAFGGYIRMFDARKY 192 (332)
Q Consensus 142 ---------D----g~i~iWd~~~~~~~~~~~~~~~---------~~~~~~---~~~----~~~~~~~~~~i~vwd~~~~ 192 (332)
| +.|..+|.++++.+-.++.... .-.... .++ .++....+|.+.++|.++.
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 3 6899999999998877765311 111222 233 2344446789999987643
Q ss_pred CCCCeeEEEecC-----------------------------------------CC--CCceeEEEcCCCCEEEEEc----
Q 020021 193 EKGPFDIFSVGG-----------------------------------------DI--SDANVVKFSNDGRLMLLTT---- 225 (332)
Q Consensus 193 ~~~~~~~~~~~~-----------------------------------------~~--~~v~~v~~s~dg~~l~~~~---- 225 (332)
+. +-.+.... .. ..-..++++|+..++.+..
T Consensus 357 ~~--lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 357 KL--QNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp CE--EEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred CE--ecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence 21 00000000 00 0012356777654444322
Q ss_pred -----------------------------CCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEE
Q 020021 226 -----------------------------MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVY 276 (332)
Q Consensus 226 -----------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~ 276 (332)
.+|.++.||+.+|+.+=+..... ....-.....+..++.|+.||.++
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL----PLWAGVLATAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS----CCCSCCEEETTTEEEEECTTSEEE
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC----CCcccceEeCCCEEEEECCCCcEE
Confidence 35889999999998764443221 111111223567788899999999
Q ss_pred EEECCCCceEEEecCCCCCC-ceEEeCCCeeEEEe
Q 020021 277 AWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFVT 310 (332)
Q Consensus 277 vWd~~~~~~~~~~~~~~~~v-~~l~~sp~~~~l~t 310 (332)
.||.++++.+..+..-.... .-+.|..+|++.+.
T Consensus 511 A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 511 AFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEECCCCCEEEEecCCCCcccCceEEEECCEEEEE
Confidence 99999999998875433222 23777778875544
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.54 E-value=0.00016 Score=69.18 Aligned_cols=253 Identities=10% Similarity=0.089 Sum_probs=146.7
Q ss_pred EEEEeCCCcEEEEEcCCCeeeEEeeeccc----ceeE-EEEccCCCEEEEecCC---CCCceeEEEEccCCceEEEeecc
Q 020021 49 LVTASDDESIRLYDVTAATCLKTINSKKY----GVDL-VCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYFKGH 120 (332)
Q Consensus 49 l~tgs~D~tv~iwd~~~~~~~~~~~~~~~----~v~~-~~~~~~~~~~~~~s~~---g~d~~v~v~d~~~~~~~~~~~~h 120 (332)
|+.++.|+.|..+|..+|+.+-....... .+.. -.+ .+..++.++.. +.++.|+.+|.++|+.+..+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v--~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV--VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE--ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 77888999999999999998866543221 1111 011 12345554421 13678999999999988766532
Q ss_pred ccc-------------------------------------EE-EEEecCCCCeEEEeeCC----------------CcEE
Q 020021 121 HDR-------------------------------------VV-SLSLCSSKDCFISGSLD----------------RTVL 146 (332)
Q Consensus 121 ~~~-------------------------------------V~-~v~~~~~~~~l~s~s~D----------------g~i~ 146 (332)
... ++ ...+.+...++..+..+ +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 111 00 23444555666655544 4799
Q ss_pred EEeCCCceEEEEEEecCc---------eeEEEc---CCC---eEEE-EEeCCEEEEEECccCCCCCeeEEEecC------
Q 020021 147 LWDQRAEKCQGLLRVQGR---------PAAAYD---DQG---LVFA-VAFGGYIRMFDARKYEKGPFDIFSVGG------ 204 (332)
Q Consensus 147 iWd~~~~~~~~~~~~~~~---------~~~~~~---~~~---~~~~-~~~~~~i~vwd~~~~~~~~~~~~~~~~------ 204 (332)
.+|.++++..-.++.... .-...+ .++ .++. ...+|.+.++|.++.+. +-......
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~--lw~~~~~~~~~~~~ 359 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGAL--VSANKLDDTVNVFK 359 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCE--EEEEESSTTCCSEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCE--eecccccCCccccc
Confidence 999999988777765321 011222 234 3333 44578888888765321 00011000
Q ss_pred ----CC---------------------------CCceeEEEcCCCCEEEEEc----------------------------
Q 020021 205 ----DI---------------------------SDANVVKFSNDGRLMLLTT---------------------------- 225 (332)
Q Consensus 205 ----~~---------------------------~~v~~v~~s~dg~~l~~~~---------------------------- 225 (332)
.. ..-..++++|+..++.+..
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceec
Confidence 00 0112456777665554321
Q ss_pred -----------CCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCC
Q 020021 226 -----------MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDT 294 (332)
Q Consensus 226 -----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~ 294 (332)
..|.+..||+.+|+.+=...... +...-.+...+..++.++.||.++.+|..+++.+..+.....
T Consensus 440 ~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g 515 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF----AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG 515 (599)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS----CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC----CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCC
Confidence 34789999999998764443211 111111223667778899999999999999999887753322
Q ss_pred C-CceEEeCCCeeEEE
Q 020021 295 E-PPVIKWTPGSLMFV 309 (332)
Q Consensus 295 ~-v~~l~~sp~~~~l~ 309 (332)
. ..-+.|..+|++.+
T Consensus 516 ~~~~P~~y~~~G~qyv 531 (599)
T 1w6s_A 516 AIGYPMTYTHKGTQYV 531 (599)
T ss_dssp CCSCCEEEEETTEEEE
T ss_pred cEeccEEEEeCCEEEE
Confidence 2 23366767776543
No 259
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.53 E-value=7.3e-05 Score=71.22 Aligned_cols=258 Identities=12% Similarity=0.076 Sum_probs=150.0
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeeEEeeeccc----ceeE-EEEccCCCEEEEecCC---CCCceeEEEEccCCceEEEe
Q 020021 46 SSYLVTASDDESIRLYDVTAATCLKTINSKKY----GVDL-VCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYF 117 (332)
Q Consensus 46 g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~----~v~~-~~~~~~~~~~~~~s~~---g~d~~v~v~d~~~~~~~~~~ 117 (332)
+..++.++.|+.|..+|..+|+.+-....... .+.. -.. .+..++.++.. +.++.+..+|.++|+.+..+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 45777888999999999999998866543221 1111 011 13355555432 12678999999999988766
Q ss_pred eccccc-------------------------------------E-EEEEecCCCCeEEEeeC------------C----C
Q 020021 118 KGHHDR-------------------------------------V-VSLSLCSSKDCFISGSL------------D----R 143 (332)
Q Consensus 118 ~~h~~~-------------------------------------V-~~v~~~~~~~~l~s~s~------------D----g 143 (332)
...... + ..+++.+....+..+.. | +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 532110 0 12344554455544432 2 3
Q ss_pred cEEEEeCCCceEEEEEEecCc---------eeEEEc--CCC---eEE-EEEeCCEEEEEECccCCCCCeeEEEecCC---
Q 020021 144 TVLLWDQRAEKCQGLLRVQGR---------PAAAYD--DQG---LVF-AVAFGGYIRMFDARKYEKGPFDIFSVGGD--- 205 (332)
Q Consensus 144 ~i~iWd~~~~~~~~~~~~~~~---------~~~~~~--~~~---~~~-~~~~~~~i~vwd~~~~~~~~~~~~~~~~~--- 205 (332)
.|..+|.++++.+-.++.... .-.... .++ .++ ....+|.+.++|..+.+. +-.......
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~--~w~~~~~~~~~w 350 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNL--IVAEKVDPAVNV 350 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCE--EEEEESSTTCCS
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCE--EeeecccCCccc
Confidence 599999999988777664311 111121 234 233 334468888888764321 111111100
Q ss_pred -------C---------------------------CCceeEEEcCCCCEEEEEc--------------------------
Q 020021 206 -------I---------------------------SDANVVKFSNDGRLMLLTT-------------------------- 225 (332)
Q Consensus 206 -------~---------------------------~~v~~v~~s~dg~~l~~~~-------------------------- 225 (332)
. ..-..++++|+..++.+..
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 0 0013467888876665543
Q ss_pred -----------CCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCCCC
Q 020021 226 -----------MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSFDT 294 (332)
Q Consensus 226 -----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~~ 294 (332)
.+|.++.||+.+|+.+-++.... ......+...+..++.++.||.++.||..+++.+..+.....
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~----~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 506 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF----AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSG 506 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS----CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred eccCccccCCCCCCeEEEEECCCCCEEEEecCCC----CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCC
Confidence 35789999999998875554321 111122233566777799999999999999999887754322
Q ss_pred C-CceEEeCCCeeEEEec
Q 020021 295 E-PPVIKWTPGSLMFVTG 311 (332)
Q Consensus 295 ~-v~~l~~sp~~~~l~t~ 311 (332)
. -.-+.+.+++++++..
T Consensus 507 ~~~~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 507 GIGSPMTYSFKGKQYIGS 524 (571)
T ss_dssp CCSCCEEEEETTEEEEEE
T ss_pred cEeeeEEEEECCEEEEEE
Confidence 1 2335566777766554
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.49 E-value=0.00016 Score=68.83 Aligned_cols=193 Identities=11% Similarity=0.060 Sum_probs=109.9
Q ss_pred CCEEEEEeC-CCcEEEEEc-CCCeeeEEeeeccc-ce----------eEEEEccCCCEEEEecCCCCCceeEEEEccCCc
Q 020021 46 SSYLVTASD-DESIRLYDV-TAATCLKTINSKKY-GV----------DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 112 (332)
Q Consensus 46 g~~l~tgs~-D~tv~iwd~-~~~~~~~~~~~~~~-~v----------~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~ 112 (332)
+..+..++. ++.|.-+|. .+|+.+-.+..... .+ ...+. .+..++.++. |+.+..+|.++|+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~---dg~l~alD~~tG~ 136 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQA---NGHLLALDAKTGK 136 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECT---TSEEEEEETTTCC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeC---CCEEEEEECCCCC
Confidence 456666666 899999999 89998866543221 00 01122 2445666543 7789999999999
Q ss_pred eEEEeec--ccc--cEEEEEecCCCCeEEEeeC------CCcEEEEeCCCceEEEEEEecCce-----------------
Q 020021 113 YLRYFKG--HHD--RVVSLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLRVQGRP----------------- 165 (332)
Q Consensus 113 ~~~~~~~--h~~--~V~~v~~~~~~~~l~s~s~------Dg~i~iWd~~~~~~~~~~~~~~~~----------------- 165 (332)
.+..... +.. .+.+--.-.++ .++.++. |+.|..+|.++++.+-.+......
T Consensus 137 ~~W~~~~~~~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 137 INWEVEVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EEEEecCCCCCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccc
Confidence 8776542 211 12110000134 4554443 799999999999887665432110
Q ss_pred -----------------------eEEEcCC-CeEEEEEeC----------------CEEEEEECccCCCCCeeEEEecCC
Q 020021 166 -----------------------AAAYDDQ-GLVFAVAFG----------------GYIRMFDARKYEKGPFDIFSVGGD 205 (332)
Q Consensus 166 -----------------------~~~~~~~-~~~~~~~~~----------------~~i~vwd~~~~~~~~~~~~~~~~~ 205 (332)
...+++. +.++....+ +.|..+|.++.+. .-.+....+
T Consensus 216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~--~W~~~~~~~ 293 (571)
T 2ad6_A 216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMA--KWGYQKTPH 293 (571)
T ss_dssp CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCE--EEEEESSTT
T ss_pred ccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcE--EEEecCCCC
Confidence 1233332 344333321 2577788765321 112222211
Q ss_pred C-------CCceeEEEcCCCC---EEEEEcCCCeEEEEEccCCeEeEEeee
Q 020021 206 I-------SDANVVKFSNDGR---LMLLTTMEGHIHVLDSFRGTLLSTYNV 246 (332)
Q Consensus 206 ~-------~~v~~v~~s~dg~---~l~~~~~dg~i~i~d~~~~~~~~~~~~ 246 (332)
. .....+....+|+ .++.++.+|.++++|..+|+++-.+..
T Consensus 294 d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 294 DEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp CSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred cccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecc
Confidence 1 1112223335784 677888999999999999998766543
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.49 E-value=0.00054 Score=67.70 Aligned_cols=279 Identities=10% Similarity=0.054 Sum_probs=160.5
Q ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeee-------cccceeEEEEccCCCEEEEecCCCCCceeEEEE
Q 020021 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS-------KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d 107 (332)
..|.+|..+++|.+.+.. .+ .+.+||..+++...-... ....|..+....++. +..+.. .+-+.++|
T Consensus 211 ~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~---~~Gl~~~~ 284 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT-SK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATE---LNGIMILD 284 (781)
T ss_dssp SSEEEEEECTTCCEEEEE-TT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEES---SSCEEEEE
T ss_pred CceeEEEEcCCCCEEEEe-CC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeC---CCCeEEEC
Confidence 568999999988877644 34 699999877654322111 123466665555553 444432 13477788
Q ss_pred ccCCceEEEee--------------cccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe---------c--
Q 020021 108 LHDNKYLRYFK--------------GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV---------Q-- 162 (332)
Q Consensus 108 ~~~~~~~~~~~--------------~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~---------~-- 162 (332)
..++....... -....|.++...++|. |..|+.++-|..++...+........ .
T Consensus 285 ~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 363 (781)
T 3v9f_A 285 LQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNK 363 (781)
T ss_dssp TTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSS
T ss_pred CCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCc
Confidence 77654322111 1245688888877775 56677777788888765543222110 1
Q ss_pred CceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeE
Q 020021 163 GRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS 242 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~ 242 (332)
.......+.++.+..+..++-|..||........+. .........|.++...++|.+.+ ++.++-+..+|..+++..
T Consensus 364 ~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~- 440 (781)
T 3v9f_A 364 VVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNK-ENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ- 440 (781)
T ss_dssp CEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC------CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-
T ss_pred ceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEcc-CCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-
Confidence 112334455677776666677888886532111110 00011224577788888888666 555567888998776543
Q ss_pred EeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEecCC-----CCCCceEEeCCCeeEEEecc-ceEE
Q 020021 243 TYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSF-----DTEPPVIKWTPGSLMFVTGS-SELS 316 (332)
Q Consensus 243 ~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~-----~~~v~~l~~sp~~~~l~t~~-~d~~ 316 (332)
.+.........+.++...++|+..+.. . +-+.++|..+++........ ...|.++...+++++.+... ..+.
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~ 518 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVG 518 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEE
T ss_pred EeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEE
Confidence 222111234567788888888876654 4 45999998876543322211 34577888888888766654 4577
Q ss_pred Eeccccccc
Q 020021 317 FWIPDLSKL 325 (332)
Q Consensus 317 ~w~~~~~~~ 325 (332)
.++++..++
T Consensus 519 ~~~~~~~~~ 527 (781)
T 3v9f_A 519 IYTPDMQLV 527 (781)
T ss_dssp EECTTCCEE
T ss_pred EEeCCCCeE
Confidence 777665443
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.42 E-value=0.00058 Score=59.35 Aligned_cols=219 Identities=11% Similarity=0.033 Sum_probs=124.8
Q ss_pred ceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCC-C-cEEEEeCCCceE
Q 020021 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD-R-TVLLWDQRAEKC 155 (332)
Q Consensus 78 ~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~D-g-~i~iWd~~~~~~ 155 (332)
....+++.+++. ++++.. .++.|..+|.... ....+. -.....++++.++++.+++.... + .|..+|..+++.
T Consensus 33 ~pegia~~~~g~-lyv~d~--~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 33 FLENLASAPDGT-IFVTNH--EVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CEEEEEECTTSC-EEEEET--TTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CcceEEECCCCC-EEEEeC--CCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 355678888776 444432 2567888887653 332222 23468899999999876665432 2 466667677665
Q ss_pred EEEEEecC---ceeEEEcCCCeEEEEE-eCCEEEEEECccCCCCCeeEEEe---------cCCCCCceeEEEcCCCC-EE
Q 020021 156 QGLLRVQG---RPAAAYDDQGLVFAVA-FGGYIRMFDARKYEKGPFDIFSV---------GGDISDANVVKFSNDGR-LM 221 (332)
Q Consensus 156 ~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~i~vwd~~~~~~~~~~~~~~---------~~~~~~v~~v~~s~dg~-~l 221 (332)
........ .......+++.++... ..+.|..+|..... ...... .......+.+ +||++ ++
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~---~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS---GSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE---EEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCc---EeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 43332221 1122223444444444 36788888864210 011100 0111223444 88885 55
Q ss_pred EEEcCCCeEEEEEccC-CeE--eEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEE--EecCCCCCC
Q 020021 222 LLTTMEGHIHVLDSFR-GTL--LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVA--SWMSFDTEP 296 (332)
Q Consensus 222 ~~~~~dg~i~i~d~~~-~~~--~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~--~~~~~~~~v 296 (332)
++-...++|+.+|... ++. ...+.. ......++++++|+++++....+.|.++|.. ++... .+...-..+
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~~----~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p 257 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFVE----QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGS 257 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEEE----SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTE
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEec----cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCc
Confidence 6667788999999864 332 111111 1223468999999988887778899999974 65432 232222457
Q ss_pred ceEEeC---CCe-eEEEec
Q 020021 297 PVIKWT---PGS-LMFVTG 311 (332)
Q Consensus 297 ~~l~~s---p~~-~~l~t~ 311 (332)
++++|. |++ .++++.
T Consensus 258 ~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 258 TAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EEEEECCSTTTTTEEEEEE
T ss_pred eEEEEecccCCCCEEEEEC
Confidence 899998 885 455554
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.42 E-value=0.00077 Score=64.39 Aligned_cols=194 Identities=14% Similarity=0.075 Sum_probs=111.5
Q ss_pred CCEEEEEeC-CCcEEEEEc-CCCeeeEEeeecccc-----------eeEEEEccCCCE----EEEecCCCCCceeEEEEc
Q 020021 46 SSYLVTASD-DESIRLYDV-TAATCLKTINSKKYG-----------VDLVCFTSHPTT----VIYSSKNGWDESLRLLSL 108 (332)
Q Consensus 46 g~~l~tgs~-D~tv~iwd~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----~~~~s~~g~d~~v~v~d~ 108 (332)
+..+..++. ++.|.-+|. .+|+.+-.+...... ...+++.+.+.. ++.++. |+.+..+|.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~---dg~l~AlDa 138 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL---DGNVAALNA 138 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---TSEEEEEET
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---CCEEEEEEC
Confidence 456666776 899999999 899988666433210 112344333333 666543 778999999
Q ss_pred cCCceEEEeeccc--c--cEEEEEecCCCCeEEEee------CCCcEEEEeCCCceEEEEEEecCce-------------
Q 020021 109 HDNKYLRYFKGHH--D--RVVSLSLCSSKDCFISGS------LDRTVLLWDQRAEKCQGLLRVQGRP------------- 165 (332)
Q Consensus 109 ~~~~~~~~~~~h~--~--~V~~v~~~~~~~~l~s~s------~Dg~i~iWd~~~~~~~~~~~~~~~~------------- 165 (332)
++|+.+....... . .+.+--.-.++ .++.++ .++.|+.+|.++++.+-.+......
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 139 ETGETVWKVENSDIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCCEEEeecCCCCCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 9999876654221 0 12211001134 444444 4899999999999887655432110
Q ss_pred ---------------------------eEEEcC-CCeEEEEEeC----------------CEEEEEECccCCCCCeeEEE
Q 020021 166 ---------------------------AAAYDD-QGLVFAVAFG----------------GYIRMFDARKYEKGPFDIFS 201 (332)
Q Consensus 166 ---------------------------~~~~~~-~~~~~~~~~~----------------~~i~vwd~~~~~~~~~~~~~ 201 (332)
...+++ .+.++....+ +.|..+|.++.+. .-.+.
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~--~W~~q 295 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEA--KFGYQ 295 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCE--EEEEE
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCce--eeEee
Confidence 113333 3344443333 3677777765321 11222
Q ss_pred ecCCC-------CCceeEEEc-CCC---CEEEEEcCCCeEEEEEccCCeEeEEee
Q 020021 202 VGGDI-------SDANVVKFS-NDG---RLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (332)
Q Consensus 202 ~~~~~-------~~v~~v~~s-~dg---~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (332)
...+. .....+... .+| ..++.++.+|.++++|..+|+++-...
T Consensus 296 ~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 296 KTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp SSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 22221 011112222 577 567778999999999999999886554
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.42 E-value=4.5e-05 Score=66.94 Aligned_cols=195 Identities=12% Similarity=0.076 Sum_probs=118.3
Q ss_pred cEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec----------------------CceeEEEcC-CCeEEEEE
Q 020021 123 RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ----------------------GRPAAAYDD-QGLVFAVA 179 (332)
Q Consensus 123 ~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~----------------------~~~~~~~~~-~~~~~~~~ 179 (332)
...++++.++++.++++..++.|..||..++... .+... ......+++ ++.++.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 3456788888887888888899999998765433 22110 112345564 66666665
Q ss_pred eCCEEEEEECccCCCCCeeEEE--ecC-CCCCceeEEEcC-CCCEEEEEcC-----------------CCeEEEEEccCC
Q 020021 180 FGGYIRMFDARKYEKGPFDIFS--VGG-DISDANVVKFSN-DGRLMLLTTM-----------------EGHIHVLDSFRG 238 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~~~~~~--~~~-~~~~v~~v~~s~-dg~~l~~~~~-----------------dg~i~i~d~~~~ 238 (332)
..+.|..+|..... ...+. ..+ .....+.+++.+ +|+++++... ++.|..+|..++
T Consensus 99 ~~~~i~~~d~~~g~---~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 99 CYYHLSVVGSEGGH---ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp TTTEEEEECTTCEE---CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred CCCCEEEEeCCCCE---EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 55667778754211 11111 111 112357799999 9998887543 367999998777
Q ss_pred eEeEEeeecCCCCCcceEEEECCCCCEEEEE-cCCCcEEEEECCCCc--eEEEecCCCCCCceEEeCCCeeEEEeccc--
Q 020021 239 TLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGSS-- 313 (332)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~v~~spdg~~l~sg-s~Dg~i~vWd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~l~t~~~-- 313 (332)
+....... ......++++|||++|+.+ +..+.|+++++.... ....+....+ +..+++.++|++.++...
T Consensus 176 ~~~~~~~~----~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~ 250 (322)
T 2fp8_A 176 ETTLLLKE----LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEEL 250 (322)
T ss_dssp EEEEEEEE----ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEET
T ss_pred EEEEeccC----CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcc
Confidence 64322211 1223468999999866555 667899999987421 1222222223 677999999987777543
Q ss_pred ----------eEEEecccccccc
Q 020021 314 ----------ELSFWIPDLSKLG 326 (332)
Q Consensus 314 ----------d~~~w~~~~~~~~ 326 (332)
.+..++++.+.+.
T Consensus 251 ~~~~~~~~~~~v~~~d~~G~~~~ 273 (322)
T 2fp8_A 251 DGNMHGRVDPKGIKFDEFGNILE 273 (322)
T ss_dssp TSSTTSCEEEEEEEECTTSCEEE
T ss_pred cccccCCCccEEEEECCCCCEEE
Confidence 2566666654443
No 265
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.25 E-value=0.0015 Score=55.17 Aligned_cols=214 Identities=13% Similarity=0.170 Sum_probs=127.9
Q ss_pred eEeccCCCcEEEEEECCCCCEEE-EEeCCCcEEEEEcCCCeeeEEeeecc-cceeEEEEccCCCEEEEecCCCCCceeEE
Q 020021 28 MSFRDYNGRISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (332)
Q Consensus 28 ~~l~~h~~~I~~i~~s~dg~~l~-tgs~D~tv~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~s~~g~d~~v~v 105 (332)
+.+.+-.+.++.|+++|+++.|. ....++.|...|+. ++.++.+.... .....+++.+++...++ .. + ++.+.+
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs-~E-~-~~~l~~ 95 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVIS-DE-R-DYAIYV 95 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEE-ET-T-TTEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEE-EC-C-CCcEEE
Confidence 56778888999999999876554 46677888888987 88887775321 23556777766654343 32 2 567888
Q ss_pred EEccCCceE---EEee------cccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEE
Q 020021 106 LSLHDNKYL---RYFK------GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVF 176 (332)
Q Consensus 106 ~d~~~~~~~---~~~~------~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (332)
+++.....+ .... .+....-++++.|.+++|..+.......+|.+. +.. .+.
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~-g~~----------------~~~-- 156 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN-GLL----------------SSN-- 156 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE-STT----------------CSS--
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc-ccc----------------cCC--
Confidence 877654322 1111 123345789999988777776655554555442 100 000
Q ss_pred EEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCC-CCEEEEEcCCCeEEEEEccCCeEeEEeeecCCC-----
Q 020021 177 AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS----- 250 (332)
Q Consensus 177 ~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~d-g~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----- 250 (332)
.+++.+..... ......+..++++.|. |++++.+...+.+.++|.. |+.+..+.+....
T Consensus 157 ------~l~i~~~~~~~--------~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~ 221 (255)
T 3qqz_A 157 ------ELHISKDKALQ--------RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSH 221 (255)
T ss_dssp ------CCEEEECHHHH--------HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSS
T ss_pred ------ceeeecchhhc--------cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCccc
Confidence 01111100000 0001134577888874 5677778888899999965 6677666554221
Q ss_pred -CCcceEEEECCCCCEEEEEcCCCcEEEEEC
Q 020021 251 -RNSTLEASFSPEGMFVISGSGDGSVYAWSV 280 (332)
Q Consensus 251 -~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~ 280 (332)
..-.-.++|.|+|+.+++ |+-.-++++.-
T Consensus 222 ~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 222 NIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp CCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred ccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 112246999999986655 66667777654
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.22 E-value=0.0029 Score=57.00 Aligned_cols=250 Identities=11% Similarity=0.006 Sum_probs=141.8
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEe
Q 020021 38 SSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 117 (332)
Q Consensus 38 ~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~ 117 (332)
.|.+..+++ +|+- +....|+..++...+....+. .......++|.+....++++.. ..+.|..+++..+.....+
T Consensus 80 ~C~~~~~~~-~l~~-~~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~--~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 80 SCKALGPEP-VLLF-ANRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDV--TLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp CEEECSSCC-EEEE-ECBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCCEEEEE
T ss_pred eECCccccc-eeEe-ecCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeC--CCCcEEEEecCCCCcEEEE
Confidence 355555533 3332 234678888887655433333 2334667889888788887753 2567888888776544444
Q ss_pred ecccccEEEEEecCC-CCeEEEeeCCCcEEEEeCCCceEEEEEEe--cCceeEEEcC-CCeEEEEEe-C-CEEEEEECcc
Q 020021 118 KGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRV--QGRPAAAYDD-QGLVFAVAF-G-GYIRMFDARK 191 (332)
Q Consensus 118 ~~h~~~V~~v~~~~~-~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~-~-~~i~vwd~~~ 191 (332)
........++++.+. ++..++-...+.|.+.++........+.. ......++++ .+.++.+.. . +.|..+++.-
T Consensus 155 ~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 155 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 333344567888864 44556666677888888765432222221 1122445665 344443333 3 5777777643
Q ss_pred CCCCCeeEEEecCCCCCceeEEEcCCC-CEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEc
Q 020021 192 YEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270 (332)
Q Consensus 192 ~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs 270 (332)
.. ...+ ........+.++++|++ +++++-...+.|..+|+..... ..+.. ........+++ ..+..+.+-.
T Consensus 235 ~~---~~~~-~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~--~~~~~P~giav-~~~~ly~td~ 306 (386)
T 3v65_B 235 SG---RRII-ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVIS--QGLPHPFAITV-FEDSLYWTDW 306 (386)
T ss_dssp CS---CEEE-ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEEC--SSCSSEEEEEE-ETTEEEEEET
T ss_pred CC---cEEE-EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEE--CCCCCceEEEE-ECCEEEEeeC
Confidence 21 1111 11122345789999755 5556666778999999764322 22221 11233456777 4556666667
Q ss_pred CCCcEEEEECCCCceEEEecCCCCCCceEE
Q 020021 271 GDGSVYAWSVRSGKEVASWMSFDTEPPVIK 300 (332)
Q Consensus 271 ~Dg~i~vWd~~~~~~~~~~~~~~~~v~~l~ 300 (332)
..+.|..++..+++.+..+......+..|+
T Consensus 307 ~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~ 336 (386)
T 3v65_B 307 HTKSINSANKFTGKNQEIIRNKLHFPMDIH 336 (386)
T ss_dssp TTTEEEEEETTTCCSCEEEECSCSCCCCEE
T ss_pred CCCeEEEEECCCCcceEEEccCCCCCceEE
Confidence 788899999767776665543323344444
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.19 E-value=0.0044 Score=59.02 Aligned_cols=110 Identities=13% Similarity=0.092 Sum_probs=65.0
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeeeEEeeecccc-e--------eEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEE
Q 020021 46 SSYLVTASDDESIRLYDVTAATCLKTINSKKYG-V--------DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRY 116 (332)
Q Consensus 46 g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~-v--------~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~ 116 (332)
+..+..++.++.|.-+|..+|+.+-.+...... . ..+++ .+..++.++. |+.+..+|.++|+.+..
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~---dg~l~AlD~~TG~~~W~ 142 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTL---DASVVALNKNTGKVVWK 142 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEET---TTEEEEEESSSCCEEEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeC---CCEEEEEECCCCCEEee
Confidence 345555555444999999999998766543211 0 11111 2345665543 67899999999998876
Q ss_pred eecccc----cEEE-EEecC---CCC-eEEEee------CCCcEEEEeCCCceEEEEEE
Q 020021 117 FKGHHD----RVVS-LSLCS---SKD-CFISGS------LDRTVLLWDQRAEKCQGLLR 160 (332)
Q Consensus 117 ~~~h~~----~V~~-v~~~~---~~~-~l~s~s------~Dg~i~iWd~~~~~~~~~~~ 160 (332)
.+.... .+.+ -.+.. +++ .++.++ .++.|..+|.++++.+-...
T Consensus 143 ~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 143 KKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp EECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred ecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 653221 1111 01111 233 555554 38999999999988765443
No 268
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.18 E-value=0.0031 Score=57.76 Aligned_cols=239 Identities=10% Similarity=0.069 Sum_probs=134.8
Q ss_pred EEEEEECCC---CCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCC-Cce-eEEEEccCC
Q 020021 37 ISSMDFHKS---SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW-DES-LRLLSLHDN 111 (332)
Q Consensus 37 I~~i~~s~d---g~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~-d~~-v~v~d~~~~ 111 (332)
...|+++|+ +.++++ ...+.|+.+|..++....... .......+++.+++. ++++...+. +.. +...+...+
T Consensus 141 P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCEEEECTTTTTCEEEEE-CBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CceEEEccccCCCEEEEE-eCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 558999985 554444 333899999998777654333 333467889999998 555432211 111 222232221
Q ss_pred ce-EEEeecccccEEEEEecC-CCCeEEEeeCCCcEEEEeCCCceEEE-EEEecC---ceeEEEcCCCeEEEEE--eCCE
Q 020021 112 KY-LRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQG-LLRVQG---RPAAAYDDQGLVFAVA--FGGY 183 (332)
Q Consensus 112 ~~-~~~~~~h~~~V~~v~~~~-~~~~l~s~s~Dg~i~iWd~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~--~~~~ 183 (332)
.. ...+. .......+++.| ++...++-..++.|+.+|..++.... .+.... ....++++++..+.++ ..+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11 01111 223345678888 67777777778889999987665422 222111 1236777777533333 3578
Q ss_pred EEEEECccCCC--C-CeeEEEecC------------CCCCceeEEE---------cCCCCEEEEEcCCCeEEEEEccCCe
Q 020021 184 IRMFDARKYEK--G-PFDIFSVGG------------DISDANVVKF---------SNDGRLMLLTTMEGHIHVLDSFRGT 239 (332)
Q Consensus 184 i~vwd~~~~~~--~-~~~~~~~~~------------~~~~v~~v~~---------s~dg~~l~~~~~dg~i~i~d~~~~~ 239 (332)
|+.++...... . +..+....+ .......+++ .++|.++++-..+++|+.++. .|.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 98887542110 0 111111000 1123456888 788899998888999999985 565
Q ss_pred EeEEeeecCC---------------CCCcceEEEEC-CCCCEEEEEcCCCcEEEEECC
Q 020021 240 LLSTYNVKPV---------------SRNSTLEASFS-PEGMFVISGSGDGSVYAWSVR 281 (332)
Q Consensus 240 ~~~~~~~~~~---------------~~~~~~~v~~s-pdg~~l~sgs~Dg~i~vWd~~ 281 (332)
.. ++..... .-.....++++ ++|+.+++=.....|+.++++
T Consensus 376 v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 376 VT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 43 2221110 01234568888 566666665666777777653
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.15 E-value=0.0023 Score=58.54 Aligned_cols=241 Identities=12% Similarity=0.146 Sum_probs=135.2
Q ss_pred EEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCC-c-eeEEEEccCCce
Q 020021 37 ISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD-E-SLRLLSLHDNKY 113 (332)
Q Consensus 37 I~~i~~s~-dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d-~-~v~v~d~~~~~~ 113 (332)
...|+++| ++..|..+...+.|+.+|+.++....... .......+++.+++..++++...+.. . .+...+. .+..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~ 216 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGF 216 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTS
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCce
Confidence 46889998 34455555544889999998766543333 33346678999999877666432111 1 2333333 2222
Q ss_pred E--EEeecccccEEEEEecC-CCCeEEEeeCCCcEEEEeCCCceEEEEEEecC---ceeEEEcCCCeEEEEE--eCCEEE
Q 020021 114 L--RYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVA--FGGYIR 185 (332)
Q Consensus 114 ~--~~~~~h~~~V~~v~~~~-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~i~ 185 (332)
. ..+.. .....+++++| ++..+++-..++.|..+|...+.......... ....++++++..+.++ ..+.|.
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 1 22221 23346778899 67777776677899999987665433333321 2346778877633333 357888
Q ss_pred EEECccCCC--C-CeeEEEecC------------CCCCce-eEEEc--------CCCCEEEEEcCCCeEEEEEccCCeEe
Q 020021 186 MFDARKYEK--G-PFDIFSVGG------------DISDAN-VVKFS--------NDGRLMLLTTMEGHIHVLDSFRGTLL 241 (332)
Q Consensus 186 vwd~~~~~~--~-~~~~~~~~~------------~~~~v~-~v~~s--------~dg~~l~~~~~dg~i~i~d~~~~~~~ 241 (332)
.++...... . ...+....+ ...... .++.. ++|.++++-...++|+.++. .|...
T Consensus 296 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~ 374 (430)
T 3tc9_A 296 RSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVT 374 (430)
T ss_dssp EEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEE
T ss_pred EEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEE
Confidence 887542100 0 001111000 011122 45553 45788888888889999984 56544
Q ss_pred EEeee----cCC----------CCCcceEEEECCC-CCEEEEEcCCCcEEEEECC
Q 020021 242 STYNV----KPV----------SRNSTLEASFSPE-GMFVISGSGDGSVYAWSVR 281 (332)
Q Consensus 242 ~~~~~----~~~----------~~~~~~~v~~spd-g~~l~sgs~Dg~i~vWd~~ 281 (332)
...-. ... .-+....++++|+ +..+++-.....|+.++++
T Consensus 375 ~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 375 TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 32211 000 0124567899994 6666655666778877653
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.13 E-value=0.00012 Score=72.01 Aligned_cols=119 Identities=9% Similarity=0.110 Sum_probs=77.6
Q ss_pred cCCC-cEEEEEEC-CCCCEEEEEeC-C----CcEEEEEcCCC-eeeE-EeeecccceeEEEEccCCCEEEEecCCC--CC
Q 020021 32 DYNG-RISSMDFH-KSSSYLVTASD-D----ESIRLYDVTAA-TCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNG--WD 100 (332)
Q Consensus 32 ~h~~-~I~~i~~s-~dg~~l~tgs~-D----~tv~iwd~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~~g--~d 100 (332)
+|.- .+...+|| |||++||-+.. + .+|+++|+.++ +.+. .+.. ....++|+++++.+++..... ..
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCC
Confidence 3443 67889999 99998874332 2 35999999998 6332 1211 134578999999888876421 11
Q ss_pred ceeEEEEccCCce--EEEee-cccccEEEEEecCCCCeEEEeeC---CCcEEEEeCCCc
Q 020021 101 ESLRLLSLHDNKY--LRYFK-GHHDRVVSLSLCSSKDCFISGSL---DRTVLLWDQRAE 153 (332)
Q Consensus 101 ~~v~v~d~~~~~~--~~~~~-~h~~~V~~v~~~~~~~~l~s~s~---Dg~i~iWd~~~~ 153 (332)
..|.++++.+++. ...+. ........+.|+|||++|+..+. ...|.++|+.++
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 3678888877642 23333 23345678899999998776553 335777888764
No 271
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.11 E-value=0.0044 Score=54.98 Aligned_cols=243 Identities=11% Similarity=0.019 Sum_probs=139.6
Q ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceE
Q 020021 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~ 114 (332)
...+|....+++.++++ ....|+..++...+....+. .......++|.+....++++.. ..+.|..+++..+...
T Consensus 34 d~~~C~~~~~~~~ll~~--~~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~--~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 34 DRRSCKALGPEPVLLFA--NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDV--TLDRILRANLNGSNVE 108 (349)
T ss_dssp TSSCEEESSSCCEEEEE--CBSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCE
T ss_pred CCCcccccccCceeEee--cccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEec--cCCceEEEecCCCCce
Confidence 33456666664434443 34558888887654433332 2234667889888888887753 2567888888776544
Q ss_pred EEeecccccEEEEEecCC-CCeEEEeeCCCcEEEEeCCCceEEEEEEe--cCceeEEEcC-CCeEEEEEe-C-CEEEEEE
Q 020021 115 RYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRV--QGRPAAAYDD-QGLVFAVAF-G-GYIRMFD 188 (332)
Q Consensus 115 ~~~~~h~~~V~~v~~~~~-~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~-~-~~i~vwd 188 (332)
..+........++++.+. ++..++-...+.|.+.++........+.. ......++++ .+.++.+.. . +.|..++
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 433333344567888864 45556666778899988765433222211 1123455665 444444433 3 6787777
Q ss_pred CccCCCCCeeEEEecCCCCCceeEEEcCCC-CEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEE
Q 020021 189 ARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 267 (332)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~ 267 (332)
+.-... .. .........+.++++|++ +++++-...+.|..+|+..... ..+.. ........+++ ..+..+.
T Consensus 189 ~dG~~~---~~-~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~--~~~~~P~giav-~~~~ly~ 260 (349)
T 3v64_C 189 MDGSGR---RI-IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVIS--QGLPHPFAITV-FEDSLYW 260 (349)
T ss_dssp TTSCSC---EE-SCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEC--SSCSSEEEEEE-ETTEEEE
T ss_pred CCCCCc---EE-EEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEe--CCCCCceEEEE-ECCEEEE
Confidence 643211 11 111122345789999755 5555556778999999764322 22211 11233456777 3556666
Q ss_pred EEcCCCcEEEEECCCCceEEEec
Q 020021 268 SGSGDGSVYAWSVRSGKEVASWM 290 (332)
Q Consensus 268 sgs~Dg~i~vWd~~~~~~~~~~~ 290 (332)
+-...+.|...+..+++.+..+.
T Consensus 261 td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 261 TDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EETTTTEEEEEETTTCCSCEEEE
T ss_pred ecCCCCeEEEEEccCCCccEEec
Confidence 66677889888866776655543
No 272
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.99 E-value=0.00029 Score=68.26 Aligned_cols=240 Identities=10% Similarity=0.071 Sum_probs=128.0
Q ss_pred EEEEcc-CCCEEEEecCCC--------CCceeEEEEccCCceE--EEee-cccccEEEEEecCCCCeEEEeeC-CCcEEE
Q 020021 81 LVCFTS-HPTTVIYSSKNG--------WDESLRLLSLHDNKYL--RYFK-GHHDRVVSLSLCSSKDCFISGSL-DRTVLL 147 (332)
Q Consensus 81 ~~~~~~-~~~~~~~~s~~g--------~d~~v~v~d~~~~~~~--~~~~-~h~~~V~~v~~~~~~~~l~s~s~-Dg~i~i 147 (332)
.+++.+ ++..++++.... ....+.+||..+++.. ..+. .+.....++++..+++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 445565 565555553211 0125788998887632 2221 12233345667789999999985 458999
Q ss_pred EeCCCceEEEEEEecC---ceeEEEcCCCeEEEEEe--C-----CEEEEEECccCCCCCeeEEEe---cCCCCCceeEEE
Q 020021 148 WDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVAF--G-----GYIRMFDARKYEKGPFDIFSV---GGDISDANVVKF 214 (332)
Q Consensus 148 Wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~-----~~i~vwd~~~~~~~~~~~~~~---~~~~~~v~~v~~ 214 (332)
||..+++....-.++. ...+...+++.++..+. + ..+.+||..... ...... ......-....+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~---W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT---WTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE---EEEETTSCSGGGCCCCTTGGG
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc---ceeCCCcccccccccccccee
Confidence 9998876554332221 12334443454444433 2 468889876421 111100 000000001123
Q ss_pred cCCCCEEEEEcCCC---------eEEEEEccCCeEeEEeeecCC------CCCcceEEEEC-CCCCEEEEEcCCC-----
Q 020021 215 SNDGRLMLLTTMEG---------HIHVLDSFRGTLLSTYNVKPV------SRNSTLEASFS-PEGMFVISGSGDG----- 273 (332)
Q Consensus 215 s~dg~~l~~~~~dg---------~i~i~d~~~~~~~~~~~~~~~------~~~~~~~v~~s-pdg~~l~sgs~Dg----- 273 (332)
..+++.++.++.+| .+..||..+............ ....-..+.|. .+++.++.|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 35666666665544 567788776653322211111 01122344554 4788888888643
Q ss_pred ------cEEEEECCCCceEEEe---cCCCCCCceEEeCCCeeEEEeccc-------------eEEEeccccc
Q 020021 274 ------SVYAWSVRSGKEVASW---MSFDTEPPVIKWTPGSLMFVTGSS-------------ELSFWIPDLS 323 (332)
Q Consensus 274 ------~i~vWd~~~~~~~~~~---~~~~~~v~~l~~sp~~~~l~t~~~-------------d~~~w~~~~~ 323 (332)
.|.+||..+....... +.....-.+....|++++++.|+. ++.+|++...
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 6888888776544322 222222244566789999999873 3677776543
No 273
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.98 E-value=0.0093 Score=54.50 Aligned_cols=227 Identities=13% Similarity=0.127 Sum_probs=124.8
Q ss_pred eeEEEEcc-CCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeC-CC---cEEEEeCCCc
Q 020021 79 VDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL-DR---TVLLWDQRAE 153 (332)
Q Consensus 79 v~~~~~~~-~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~-Dg---~i~iWd~~~~ 153 (332)
...+++.| +...++++.. + +.|+.+|++.+... .+.........++|++++++|+.+.. ++ ...+|-...+
T Consensus 139 P~~lavdp~~~g~Lyv~d~-~--~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGE-Q--HPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCEEEEETTEEEEEEEEEB-T--EEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCEEEECCCCCCeEEEEeC-C--CcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 34677876 3555555543 1 67888898776543 33345566889999999995544433 22 1233322222
Q ss_pred eEE--EEE-EecCceeEEEcC-CCeEEEEEe-CCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCC-EEEEEcCC
Q 020021 154 KCQ--GLL-RVQGRPAAAYDD-QGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTME 227 (332)
Q Consensus 154 ~~~--~~~-~~~~~~~~~~~~-~~~~~~~~~-~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~~~~~d 227 (332)
... ..+ ........++++ ++.++.+.. .+.|..++...... ........ ....+.++|+|+|+ ++++-...
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~--~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET--TPLFTIQD-SGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE--EEEEECSS-SSCCEEEEECTTSSEEEEEETTT
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE--EEEEEcCC-CCcceeEEEcCCCCEEEEEECCC
Confidence 211 111 222333456676 666655553 57899998753211 01222221 13357899999999 66666788
Q ss_pred CeEEEEEccC--CeE--eEEeeecCCC------------CCcce-EEEE--------CCCCCEEEEEcCCCcEEEEECCC
Q 020021 228 GHIHVLDSFR--GTL--LSTYNVKPVS------------RNSTL-EASF--------SPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 228 g~i~i~d~~~--~~~--~~~~~~~~~~------------~~~~~-~v~~--------spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
+.|+.++... ++. +..+...... -.... .++. .++|.++++=.....|+.++ .+
T Consensus 292 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~ 370 (430)
T 3tc9_A 292 HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQ 370 (430)
T ss_dssp TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TT
T ss_pred CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CC
Confidence 8999988653 322 1122111000 01112 3444 24566666666677898888 45
Q ss_pred CceEEEecCC---------C---------CCCceEEeCC-CeeEEEeccce
Q 020021 283 GKEVASWMSF---------D---------TEPPVIKWTP-GSLMFVTGSSE 314 (332)
Q Consensus 283 ~~~~~~~~~~---------~---------~~v~~l~~sp-~~~~l~t~~~d 314 (332)
++ +.++... . ..+..|++.| ++.++++-...
T Consensus 371 G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n 420 (430)
T 3tc9_A 371 GR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDREN 420 (430)
T ss_dssp SE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred Cc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCC
Confidence 54 3333211 0 1356799999 57777775443
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.94 E-value=0.016 Score=57.17 Aligned_cols=211 Identities=9% Similarity=0.028 Sum_probs=115.0
Q ss_pred cCCCcEEEEEECCCC-CEEEEEeCCCcEEEEEcCCC----eeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEE
Q 020021 32 DYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg-~~l~tgs~D~tv~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~ 106 (332)
..-..+.+|+|++.+ .++++-...+.|+.+++... .....+.........+++...+..++++.. ..+.|.+.
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~--~~~~I~v~ 498 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS--VLGTVSVA 498 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET--TTTEEEEE
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEec--CCCeEEEE
Confidence 334567789998854 45566666778888888642 222223223334567888888888887753 25789999
Q ss_pred EccCCceEEEeecccccEEEEEecCCCCe-EEEeeCC-CcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEE
Q 020021 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKDC-FISGSLD-RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYI 184 (332)
Q Consensus 107 d~~~~~~~~~~~~h~~~V~~v~~~~~~~~-l~s~s~D-g~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 184 (332)
++........+........+|++.|.+.. ++|-... +.|...++........+
T Consensus 499 ~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv------------------------- 553 (791)
T 3m0c_C 499 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV------------------------- 553 (791)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-------------------------
T ss_pred eCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE-------------------------
Confidence 98765443334444556788998886443 3433222 44555444322111000
Q ss_pred EEEECccCCCCCeeEEEecCCCCCceeEEEcCCC-CEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCC
Q 020021 185 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 263 (332)
Q Consensus 185 ~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg 263 (332)
.......+.+++++.+ +++++-...+.|..+|+..... ..+............+++.. +
T Consensus 554 ------------------~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav~~-~ 613 (791)
T 3m0c_C 554 ------------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE-D 613 (791)
T ss_dssp ------------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEET-T
T ss_pred ------------------eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-EEEecCCCccCCCCEEEEeC-C
Confidence 0011234567888654 4444445567888888754332 22221111112334555533 3
Q ss_pred CEEEEEcCCCcEEEEECCCCceEEEe
Q 020021 264 MFVISGSGDGSVYAWSVRSGKEVASW 289 (332)
Q Consensus 264 ~~l~sgs~Dg~i~vWd~~~~~~~~~~ 289 (332)
+.+.+-...+.|...|..+++.+..+
T Consensus 614 ~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 614 KVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEEECCCCEEEEEeCCCCcceEEe
Confidence 44444456678888887777665554
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.89 E-value=0.01 Score=51.71 Aligned_cols=226 Identities=13% Similarity=0.073 Sum_probs=131.2
Q ss_pred CcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC----CceEEEeecccccEEEEEecC
Q 020021 56 ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD----NKYLRYFKGHHDRVVSLSLCS 131 (332)
Q Consensus 56 ~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~----~~~~~~~~~h~~~V~~v~~~~ 131 (332)
..|+..|+.+.+....+.. ......+++.+....++++.. ..+.|..+++.. ......+........++++.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~--~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~ 86 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 86 (316)
T ss_dssp SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEET--TTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEEC--CCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEee
Confidence 5688888887665444432 234567888888778887753 257888888875 222222332334457888886
Q ss_pred C-CCeEEEeeCCCcEEEEeCCCceEEEEEEec--CceeEEEcC-CCeEEEEEeC--CEEEEEECccCCCCCeeEEEecCC
Q 020021 132 S-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQ--GRPAAAYDD-QGLVFAVAFG--GYIRMFDARKYEKGPFDIFSVGGD 205 (332)
Q Consensus 132 ~-~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~--~~i~vwd~~~~~~~~~~~~~~~~~ 205 (332)
. ++..++-...+.|.+.|+........+... .....++++ .+.++.+..+ +.|..+++.-. ....+ ....
T Consensus 87 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~---~~~~~-~~~~ 162 (316)
T 1ijq_A 87 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---DIYSL-VTEN 162 (316)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---CEEEE-ECSS
T ss_pred cCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC---CeEEE-EECC
Confidence 4 455566677889999998755443333211 222455665 4555444433 57877776421 11111 1122
Q ss_pred CCCceeEEEcCCCC-EEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCc
Q 020021 206 ISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGK 284 (332)
Q Consensus 206 ~~~v~~v~~s~dg~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~ 284 (332)
....+.++++|++. ++++-...+.|..+|... .....+............+++. .++.+.+-...+.|..++..+++
T Consensus 163 ~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 163 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCc
Confidence 23467899998754 555556778999999864 3223332111112234466774 45666666777899999987777
Q ss_pred eEEEec
Q 020021 285 EVASWM 290 (332)
Q Consensus 285 ~~~~~~ 290 (332)
.+..+.
T Consensus 241 ~~~~i~ 246 (316)
T 1ijq_A 241 DVNLLA 246 (316)
T ss_dssp CCEEEE
T ss_pred ceEEEe
Confidence 655543
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.89 E-value=0.014 Score=53.31 Aligned_cols=228 Identities=11% Similarity=0.136 Sum_probs=127.5
Q ss_pred eeEEEEccC--CCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecCCCCeEEEeeCC---Cc-EEEEeCCC
Q 020021 79 VDLVCFTSH--PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD---RT-VLLWDQRA 152 (332)
Q Consensus 79 v~~~~~~~~--~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~D---g~-i~iWd~~~ 152 (332)
...+++.++ ...++++.. + +.|+.+|.++++.. .+.+......+++++++++.+++-... .. +...+...
T Consensus 141 P~gvavd~~s~~g~Lyv~D~-~--~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQ-R--DAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCEEEECTTTTTCEEEEECB-T--SCEEEEETTTTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CceEEEccccCCCEEEEEeC-C--CCEEEEECCCCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 346788874 445655533 1 68899998776644 344455668899999999965555421 12 22222211
Q ss_pred ceE-EEEE-EecCceeEEEcC-CCeEEEEE-eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCC-EEEEEcCC
Q 020021 153 EKC-QGLL-RVQGRPAAAYDD-QGLVFAVA-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTME 227 (332)
Q Consensus 153 ~~~-~~~~-~~~~~~~~~~~~-~~~~~~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~~~~~d 227 (332)
+.. ...+ ........++++ .+.++.+. .++.|+.+|...... ......... ......++++|+|+ ++++-...
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~-~~~~~~~~~-~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL-TEEEVMMDT-KGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE-EEEEEECSC-CSSCEEEEECTTSSEEEEEETTT
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE-EEEEeccCC-CCCcccEEEeCCCCEEEEEeCCC
Confidence 110 0111 122223345666 56555444 357888888753211 011222221 12234699999998 66666778
Q ss_pred CeEEEEEcc--CCeEe--EEeeecCC------------CCCcceEEEE---------CCCCCEEEEEcCCCcEEEEECCC
Q 020021 228 GHIHVLDSF--RGTLL--STYNVKPV------------SRNSTLEASF---------SPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 228 g~i~i~d~~--~~~~~--~~~~~~~~------------~~~~~~~v~~---------spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
+.|+.+|.. ++... ..+..... .-+....+++ .++|+++++=...+.|+.++. +
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~ 373 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-E 373 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-T
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-C
Confidence 899998865 33221 11111100 0122345888 788888887777889999985 5
Q ss_pred CceEEEecCCC------------------CCCceEEeC-CCeeEEEeccce
Q 020021 283 GKEVASWMSFD------------------TEPPVIKWT-PGSLMFVTGSSE 314 (332)
Q Consensus 283 ~~~~~~~~~~~------------------~~v~~l~~s-p~~~~l~t~~~d 314 (332)
+. +.++.... ..+..|++. +++.++++-...
T Consensus 374 G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n 423 (433)
T 4hw6_A 374 GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDN 423 (433)
T ss_dssp SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCC
Confidence 54 44332211 124568898 678777775544
No 277
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.80 E-value=0.039 Score=56.78 Aligned_cols=278 Identities=10% Similarity=0.099 Sum_probs=144.5
Q ss_pred CCCcEEEEEECCC------CCEEEEEeC-CCcEEEEEcCCCeeeEEeeec-ccceeEEEEcc--CCCEEEEecCCCCCce
Q 020021 33 YNGRISSMDFHKS------SSYLVTASD-DESIRLYDVTAATCLKTINSK-KYGVDLVCFTS--HPTTVIYSSKNGWDES 102 (332)
Q Consensus 33 h~~~I~~i~~s~d------g~~l~tgs~-D~tv~iwd~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~~~~~s~~g~d~~ 102 (332)
-.+.|.|+++.|. +++++.|.+ |++++|+++.+.+.+....-. ......+++.. ...+++.+-. |+.
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~---dG~ 628 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG---DGA 628 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEET---TSE
T ss_pred CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeC---CCe
Confidence 3568999999864 368999997 999999999887666433221 11223333322 2234454433 445
Q ss_pred eEEEE--ccCCceE---EEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecCc---eeEEEcC---
Q 020021 103 LRLLS--LHDNKYL---RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR---PAAAYDD--- 171 (332)
Q Consensus 103 v~v~d--~~~~~~~---~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~---~~~~~~~--- 171 (332)
+..+. ..+++.. ..+-| ..++.=..+...+..-+-+..++...++--+ ++.. ....... ..+.++.
T Consensus 629 l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~-~s~l~~~~v~~~~~F~se~~ 705 (1158)
T 3ei3_A 629 LFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLV-FSNVNLKEVNYMCPLNSDGY 705 (1158)
T ss_dssp EEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEE-EEEBSSSCCCEEEEECCSSS
T ss_pred EEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceE-EeccChHHhceEeccCcccC
Confidence 44333 3344321 12223 2344333333333322223334444444322 2211 1111111 1233322
Q ss_pred CCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcC-------------------------
Q 020021 172 QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM------------------------- 226 (332)
Q Consensus 172 ~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~------------------------- 226 (332)
+..++ ...++.+++..+...+ .+......- ...++.++++|+.+.++....
T Consensus 706 ~~g~v-~~~~~~LrI~~i~~~~--~~~~~~ipL-~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1158)
T 3ei3_A 706 PDSLA-LANNSTLTIGTIDEIQ--KLHIRTVPL-YESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSS 781 (1158)
T ss_dssp TTEEE-EECSSCEEEEEECCSS--SEEEEEEEC-SSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEE
T ss_pred CCcEE-EEcCCceEEEEecccC--CeeEEEEeC-CCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhh
Confidence 12333 3445668888765442 232222111 124566677776655443321
Q ss_pred ------------------------CCeEEEEEccCCeEeEEeeecCCCCCcceE---EEECCC-CCEEEEEc--------
Q 020021 227 ------------------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLE---ASFSPE-GMFVISGS-------- 270 (332)
Q Consensus 227 ------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~---v~~spd-g~~l~sgs-------- 270 (332)
-..|+++|..+.+.+..+..... ..+.+ +.|..+ ..+++.|.
T Consensus 782 ~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~n--E~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~ 859 (1158)
T 3ei3_A 782 SVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN--EYALSLVSCKLGKDPNTYFIVGTAMVYPEEA 859 (1158)
T ss_dssp EECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTT--EEEEEEEEECCTTCCCCEEEEEEEECCTTCS
T ss_pred cccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCC--cceEEEEEEEEccCCCEEEEEEeeecCCCCC
Confidence 12478888888887777765432 22233 234333 46888775
Q ss_pred --CCCcEEEEECCCCceEEEe--cCCCCCCceEEeCCCeeEEEeccceEEEecccccc
Q 020021 271 --GDGSVYAWSVRSGKEVASW--MSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSK 324 (332)
Q Consensus 271 --~Dg~i~vWd~~~~~~~~~~--~~~~~~v~~l~~sp~~~~l~t~~~d~~~w~~~~~~ 324 (332)
.-|.|+++++.+++ +..+ ....+++.+|+- -+|+++++.+..+.+|++...+
T Consensus 860 ~~~~Gri~vf~v~~~k-L~lv~~~~v~g~v~al~~-~~g~Lla~ig~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 860 EPKQGRIVVFQYSDGK-LQTVAEKEVKGAVYSMVE-FNGKLLASINSTVRLYEWTTEK 915 (1158)
T ss_dssp SCCCEEEEEEEEETTE-EEEEEEEEESSCEEEEEE-ETTEEEEEETTEEEEEEECTTS
T ss_pred CCCceEEEEEEEECCE-EEEEEEEEcCCcCEEEee-eCCEEEEEcCCEEEEEECCCCc
Confidence 34789999997543 2222 234567777772 2568888888889999986543
No 278
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.77 E-value=0.0017 Score=63.87 Aligned_cols=156 Identities=9% Similarity=0.064 Sum_probs=85.9
Q ss_pred cEEEEEec-CCCCeEEEee-CCC----cEEEEeCCCc-eEEE-EEEecCceeEEEcCCC-eEEEEEeC-----CEEEEEE
Q 020021 123 RVVSLSLC-SSKDCFISGS-LDR----TVLLWDQRAE-KCQG-LLRVQGRPAAAYDDQG-LVFAVAFG-----GYIRMFD 188 (332)
Q Consensus 123 ~V~~v~~~-~~~~~l~s~s-~Dg----~i~iWd~~~~-~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~-----~~i~vwd 188 (332)
.+....|| |||++|+-+. .+| +|+++|+.++ .... .+.. ......+++++ .++.+..+ ..|..++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-TNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-ECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-ceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 57788999 9999887443 233 5999999887 5221 1111 12234566766 45555554 2577777
Q ss_pred CccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcC---CCeEEEEEccCCe-Ee--EEeeecCCCCCcceEEEECCC
Q 020021 189 ARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM---EGHIHVLDSFRGT-LL--STYNVKPVSRNSTLEASFSPE 262 (332)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~---dg~i~i~d~~~~~-~~--~~~~~~~~~~~~~~~v~~spd 262 (332)
+.........++.... ..-...+.+||||++|+.... ...|+++|+.++. .. ..+. .........+.|+.+
T Consensus 254 lgt~~~~~~lv~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~--~~~~~~~~s~~~~~g 330 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHN-PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR--PREKGVRYDVQMHGT 330 (751)
T ss_dssp TTSCGGGCEEEEECCC-TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS--CCCTTCCEEEEEETT
T ss_pred CCCCchhcEEEEecCC-CceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee--cCCCCceEEEeeeeC
Confidence 7543222222332211 122356789999998887653 3478889987652 11 2221 112233334444444
Q ss_pred CCEEEEEcCC----CcEEEEECCC
Q 020021 263 GMFVISGSGD----GSVYAWSVRS 282 (332)
Q Consensus 263 g~~l~sgs~D----g~i~vWd~~~ 282 (332)
+.+++....+ ..|..+|+.+
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTS
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCC
Confidence 4445554443 2677777764
No 279
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.76 E-value=0.00066 Score=66.22 Aligned_cols=238 Identities=13% Similarity=0.089 Sum_probs=129.6
Q ss_pred CCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC----CceEEEeecccccEEEEEe
Q 020021 54 DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD----NKYLRYFKGHHDRVVSLSL 129 (332)
Q Consensus 54 ~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~----~~~~~~~~~h~~~V~~v~~ 129 (332)
..+.|+..++.+.+....+... ..+..++|.+....++++.. ..+.|+.+++.. ......+........++++
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~-~~p~gla~d~~~~~Ly~sD~--~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glav 460 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNL-RNVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 460 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCC-TTCCCCEEETTTTEEEECCT--TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEEC
T ss_pred CccceEEEeCCCCcceeeeccC-cceEEEccccccCeEEEEec--CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEE
Confidence 3457888888766554433322 23456788887778887743 256788888865 2222222222233456777
Q ss_pred cC-CCCeEEEeeCCCcEEEEeCCCceEEEEEEec--CceeEEEcCC-CeEEEEEe-C-CEEEEEECccCCCCCeeEEEec
Q 020021 130 CS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ--GRPAAAYDDQ-GLVFAVAF-G-GYIRMFDARKYEKGPFDIFSVG 203 (332)
Q Consensus 130 ~~-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~-~-~~i~vwd~~~~~~~~~~~~~~~ 203 (332)
.+ .++.+++-...+.|.+.++........+... .....++++. +.++.+.. . +.|..+++..... ..+ ..
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~---~~l-~~ 536 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSL-VT 536 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC---CEE-SC
T ss_pred EeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe---eEE-Ee
Confidence 75 4556666667789999998765433332211 1123455543 33333222 2 5666666532111 111 11
Q ss_pred CCCCCceeEEEcCC-CCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 204 GDISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 204 ~~~~~v~~v~~s~d-g~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
......+.++++|+ ++++++-...+.|..+|+..... ..+............+++..+ +.+.+....+.|..++..+
T Consensus 537 ~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 537 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTT
T ss_pred CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccC
Confidence 12234578999987 46666667788999999864322 222211111122334565454 4555566678999999888
Q ss_pred CceEEEecCCCCCCceEE
Q 020021 283 GKEVASWMSFDTEPPVIK 300 (332)
Q Consensus 283 ~~~~~~~~~~~~~v~~l~ 300 (332)
++.+..+......+..|+
T Consensus 615 G~~~~~i~~~~~~P~~i~ 632 (699)
T 1n7d_A 615 GSDVNLLAENLLSPEDMV 632 (699)
T ss_dssp EEEEECCCTTCSSCCCCC
T ss_pred CCceEEeecCCCCCcEEE
Confidence 887766543222344444
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.69 E-value=0.028 Score=50.74 Aligned_cols=228 Identities=12% Similarity=0.087 Sum_probs=132.6
Q ss_pred CCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCC----ceEEEeecccccEEEEEe
Q 020021 54 DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN----KYLRYFKGHHDRVVSLSL 129 (332)
Q Consensus 54 ~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~----~~~~~~~~h~~~V~~v~~ 129 (332)
....|+..|+...+....+ .....+..++|.+....++++.. ..+.|..+++... .....+........++++
T Consensus 90 ~~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~--~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 166 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 166 (400)
T ss_dssp ETTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEET--TTTEEEEEEC------CCCEEEECSSCSCEEEEEE
T ss_pred ccceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEec--CCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEE
Confidence 3467888888765543333 23345677899988888888753 2567888887652 223333334456788888
Q ss_pred cC-CCCeEEEeeCCCcEEEEeCCCceEEEEEEec--CceeEEEcC-CCeEEEEEe--CCEEEEEECccCCCCCeeEEEec
Q 020021 130 CS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ--GRPAAAYDD-QGLVFAVAF--GGYIRMFDARKYEKGPFDIFSVG 203 (332)
Q Consensus 130 ~~-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~--~~~i~vwd~~~~~~~~~~~~~~~ 203 (332)
.+ .++..++-...+.|.+.++........+... .....++++ .+.++-+.. .+.|...++.-.. .. .+ ..
T Consensus 167 D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~--~~-~~-~~ 242 (400)
T 3p5b_L 167 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IY-SL-VT 242 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS--CE-EE-EC
T ss_pred EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc--cE-EE-EE
Confidence 87 4556666677788999988765544333322 122445665 444443332 2567777764321 11 11 11
Q ss_pred CCCCCceeEEEcCCCCEE-EEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 204 GDISDANVVKFSNDGRLM-LLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 204 ~~~~~v~~v~~s~dg~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
......+.+++++++..| .+-...+.|..+|+.... ...+............+++ ..++.+.+-...+.|..+|..+
T Consensus 243 ~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-CEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEESSS
T ss_pred CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc-cEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEEcCC
Confidence 222355789999866554 555667899999986433 2233221112233345666 2345555666778899999777
Q ss_pred CceEEEec
Q 020021 283 GKEVASWM 290 (332)
Q Consensus 283 ~~~~~~~~ 290 (332)
++.+..+.
T Consensus 321 G~~~~~i~ 328 (400)
T 3p5b_L 321 GSDVNLLA 328 (400)
T ss_dssp CCCCEEEE
T ss_pred CCceEEEe
Confidence 77655543
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.66 E-value=0.027 Score=49.65 Aligned_cols=197 Identities=12% Similarity=0.240 Sum_probs=115.0
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEcc----CCCE--EEEecCCCC--CceeEEEEcc--CCceE
Q 020021 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS----HPTT--VIYSSKNGW--DESLRLLSLH--DNKYL 114 (332)
Q Consensus 45 dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~----~~~~--~~~~s~~g~--d~~v~v~d~~--~~~~~ 114 (332)
...++++....+-+.+||+ +|+.++.+... .+..+.+.+ .++. +++++. .- +++++++++. +++ +
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g--~~nnVD~r~~~~l~g~~~dla~as~-R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNTG--KLNNVDIRYDFPLNGKKVDIAAASN-RSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECCS--CEEEEEEEEEEEETTEEEEEEEEEE-CSTTCCEEEEEEECTTTCC-E
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccCC--CcccEEEecccccCCceEeEEEEeC-CCCCCCeEEEEEECCCCCc-e
Confidence 3467777888899999999 88988888642 233333333 3333 445443 33 5789999773 333 4
Q ss_pred EEeec------cc-ccEEEEEe--cCC-CC-eEEEeeCCCcEEEEeCC-------CceEEEEEEecCce-eEEEcCC-Ce
Q 020021 115 RYFKG------HH-DRVVSLSL--CSS-KD-CFISGSLDRTVLLWDQR-------AEKCQGLLRVQGRP-AAAYDDQ-GL 174 (332)
Q Consensus 115 ~~~~~------h~-~~V~~v~~--~~~-~~-~l~s~s~Dg~i~iWd~~-------~~~~~~~~~~~~~~-~~~~~~~-~~ 174 (332)
..+.. .. ..+.++++ ++. ++ +++....+|.+..|++. +.+.+..+.+...+ .++.++. +.
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGR 193 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCe
Confidence 44422 11 45667777 664 44 57777788999999873 23445555554433 4555654 45
Q ss_pred EEEEEeCCEEEEEECccCCCCCeeEE-Ee-cCC-CCCceeEEE--cCCCC-EEEEEc-CCCeEEEEEcc-CCeEeEEeee
Q 020021 175 VFAVAFGGYIRMFDARKYEKGPFDIF-SV-GGD-ISDANVVKF--SNDGR-LMLLTT-MEGHIHVLDSF-RGTLLSTYNV 246 (332)
Q Consensus 175 ~~~~~~~~~i~vwd~~~~~~~~~~~~-~~-~~~-~~~v~~v~~--s~dg~-~l~~~~-~dg~i~i~d~~-~~~~~~~~~~ 246 (332)
++.+-.+..|..++.+-......... .. .++ ..++..+++ .++|+ ++++++ .+....+||.. +.+.+..|..
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 55444455565556442211111112 22 122 236777777 56665 444444 67799999986 5666666653
No 282
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.62 E-value=0.035 Score=49.85 Aligned_cols=204 Identities=7% Similarity=0.015 Sum_probs=120.1
Q ss_pred CcEEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce
Q 020021 35 GRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (332)
Q Consensus 35 ~~I~~i~~s~dg~-~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~ 113 (332)
..+.+++|++.+. ++.+-...+.|..++.+.......+.........+++.+.+..++++.. ..+.|.+.++.....
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~--~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS--GTSRIEVANLDGAHR 193 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEET--TTTEEEECBTTSCSC
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcC--CCCeEEEEeCCCCce
Confidence 4467899997554 5556667788999998866543333322233456788877777777643 256788888765443
Q ss_pred EEEeecccccEEEEEecCCCC-eEEEeeCC-CcEEEEeCCCceEEEEEEe--cCceeEEEcC-CCeEEEEE-eCCEEEEE
Q 020021 114 LRYFKGHHDRVVSLSLCSSKD-CFISGSLD-RTVLLWDQRAEKCQGLLRV--QGRPAAAYDD-QGLVFAVA-FGGYIRMF 187 (332)
Q Consensus 114 ~~~~~~h~~~V~~v~~~~~~~-~l~s~s~D-g~i~iWd~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~-~~~~i~vw 187 (332)
...+........++++.|.+. ++++-... +.|...++........... .......+++ .+.++.+- ..+.|..+
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 333444446678999998655 44454444 6788877754332222211 1123455654 34443333 34788888
Q ss_pred ECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEee
Q 020021 188 DARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (332)
Q Consensus 188 d~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (332)
|+.... ...+.. ........+++ .++.++.+....+.|..+|..+|+.+..+.
T Consensus 274 d~dG~~--~~~~~~--~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 274 NLDGSH--RKAVIS--QGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp CTTSCS--CEEEEC--SSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred eCCCCe--eEEEEE--CCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 865321 111111 11233456777 456777777788899999876776655554
No 283
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.59 E-value=0.032 Score=48.70 Aligned_cols=225 Identities=12% Similarity=0.047 Sum_probs=126.9
Q ss_pred CCcEEEEEcCCCee-eEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce-EEEeecccccEEEEEecC-
Q 020021 55 DESIRLYDVTAATC-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-LRYFKGHHDRVVSLSLCS- 131 (332)
Q Consensus 55 D~tv~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~-~~~~~~h~~~V~~v~~~~- 131 (332)
...|+..|+..... ...+.........+.|.+....++++.. ..+.|..+++..+.. ...+........++++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~--~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV--SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 89 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET--TTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC--CCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC
Confidence 46788889876531 1111111223456788887777877753 256788888876532 122222234456788876
Q ss_pred CCCeEEEeeCCCcEEEEeCCCceEEEEEEe--cCceeEEEcC-CCeEEEEEe--CCEEEEEECccCCCCCeeEEEecCCC
Q 020021 132 SKDCFISGSLDRTVLLWDQRAEKCQGLLRV--QGRPAAAYDD-QGLVFAVAF--GGYIRMFDARKYEKGPFDIFSVGGDI 206 (332)
Q Consensus 132 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~--~~~i~vwd~~~~~~~~~~~~~~~~~~ 206 (332)
.++..++-...+.|.+.++........+.. ......++++ .+.++.+.. .+.|..+++.-.. ...+ .....
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~-~~~~l 165 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFII-INSEI 165 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEE-ECSSC
T ss_pred CCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEE-EECCC
Confidence 455666666778899998765432222211 1122345554 344444432 3677777764211 1111 11122
Q ss_pred CCceeEEEcCCC-CEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCce
Q 020021 207 SDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE 285 (332)
Q Consensus 207 ~~v~~v~~s~dg-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~ 285 (332)
...+.++++|++ +++.+-+..+.|..+|+.... ...+.. ........+++.. +..+.+-...+.|..++..+++.
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~--~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVK--GSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC--SCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEec--CCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCc
Confidence 345789999855 555566677899999986432 222221 1123344666643 45555666778999999877776
Q ss_pred EEEe
Q 020021 286 VASW 289 (332)
Q Consensus 286 ~~~~ 289 (332)
+..+
T Consensus 242 ~~~i 245 (318)
T 3sov_A 242 LREI 245 (318)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 5544
No 284
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.44 E-value=0.054 Score=47.84 Aligned_cols=204 Identities=7% Similarity=0.018 Sum_probs=121.1
Q ss_pred CcEEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce
Q 020021 35 GRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (332)
Q Consensus 35 ~~I~~i~~s~dg~-~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~ 113 (332)
..+.+++|++.+. ++.+-...+.|..++.+.......+.........+++.+.+..++++.. ..+.|.+.++.....
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~--~~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS--GTSRIEVANLDGAHR 150 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET--TTTEEEEEETTSCSC
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcC--CCCeEEEEcCCCCce
Confidence 3467899997554 4555566788988998765543333322234567788877777777643 256888888876543
Q ss_pred EEEeecccccEEEEEecCCCC-eEEEeeCC-CcEEEEeCCCceEEEEEE--ecCceeEEEcC-CCeEEEEE-eCCEEEEE
Q 020021 114 LRYFKGHHDRVVSLSLCSSKD-CFISGSLD-RTVLLWDQRAEKCQGLLR--VQGRPAAAYDD-QGLVFAVA-FGGYIRMF 187 (332)
Q Consensus 114 ~~~~~~h~~~V~~v~~~~~~~-~l~s~s~D-g~i~iWd~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~-~~~~i~vw 187 (332)
...+........++++.|.+. .+++-... +.|...++........+. .......++++ .+.++.+- ..+.|..+
T Consensus 151 ~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 151 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 333444445678999998554 45555444 778888775433222111 11123456664 44444333 34788888
Q ss_pred ECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEee
Q 020021 188 DARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (332)
Q Consensus 188 d~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (332)
|+.-.. ...+.. ........+++ .++.++.+-...+.|..+|..+|+....+.
T Consensus 231 ~~dG~~--~~~~~~--~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 231 NLDGSH--RKAVIS--QGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp ETTSCS--CEEEEC--SSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred eCCCCc--eEEEEe--CCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 875321 111111 11233456777 466777777788889888876676555443
No 285
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.38 E-value=0.058 Score=46.86 Aligned_cols=205 Identities=9% Similarity=0.054 Sum_probs=117.9
Q ss_pred CcEEEEEECCCCC-EEEEEeCCCcEEEEEcCC---CeeeEE-eeecccceeEEEEccCCCEEEEecCCCCCceeEEEEcc
Q 020021 35 GRISSMDFHKSSS-YLVTASDDESIRLYDVTA---ATCLKT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (332)
Q Consensus 35 ~~I~~i~~s~dg~-~l~tgs~D~tv~iwd~~~---~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~ 109 (332)
..+.++.|+++++ ++.+-...+.|..+++.. +..... +...-.....+++.+.+..++++.. ..+.|.+.++.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~--~~~~I~~~~~~ 107 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS--VLGTVSVADTK 107 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET--TTTEEEEEETT
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEEC--CCCEEEEEeCC
Confidence 4567999998654 556666678999999875 122222 2222234567888876777776643 25789999987
Q ss_pred CCceEEEeecccccEEEEEecCCCCe-EEEeeCC-CcEEEEeCCCceEEEEEE--ecCceeEEEcCC-CeEEEEE-eCCE
Q 020021 110 DNKYLRYFKGHHDRVVSLSLCSSKDC-FISGSLD-RTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQ-GLVFAVA-FGGY 183 (332)
Q Consensus 110 ~~~~~~~~~~h~~~V~~v~~~~~~~~-l~s~s~D-g~i~iWd~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~-~~~~ 183 (332)
.......+........++++.|.+.. +++-... +.|...++.......... ........+++. +.++.+. ..+.
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 54433333334456789999986554 4444333 678777775433221211 112234566654 4444343 3478
Q ss_pred EEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEe
Q 020021 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244 (332)
Q Consensus 184 i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~ 244 (332)
|..+|..... ...+............+++. ++.++.+....+.|..+|..+|+.+..+
T Consensus 188 I~~~d~dg~~--~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 188 ISSIDVNGGN--RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEETTSCS--CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCCc--eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 9999875321 11122211122234567774 4677777778889999998777665544
No 286
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.37 E-value=0.049 Score=45.84 Aligned_cols=197 Identities=7% Similarity=0.059 Sum_probs=112.7
Q ss_pred EeecccccEEEEEecCCCCeEEE-eeCCCcEEEEeCCCceEEEEEEecC---ceeEEEcCCCeEEEEE-eCCEEEEEECc
Q 020021 116 YFKGHHDRVVSLSLCSSKDCFIS-GSLDRTVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVA-FGGYIRMFDAR 190 (332)
Q Consensus 116 ~~~~h~~~V~~v~~~~~~~~l~s-~s~Dg~i~iWd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~i~vwd~~ 190 (332)
-+.|-.+.+.+++++|+++.|.+ ...++.|...|.. ++....+...+ .....+..++.++.+. .++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 34556678999999998776655 5567788888887 66666655432 2344555666554443 34677777765
Q ss_pred cCCC-CCeeEEEec----CCCCCceeEEEcCCCCEEEEEcCCCeEEEEEcc---CCeEeEEeee----cCCCCCcceEEE
Q 020021 191 KYEK-GPFDIFSVG----GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF---RGTLLSTYNV----KPVSRNSTLEAS 258 (332)
Q Consensus 191 ~~~~-~~~~~~~~~----~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~---~~~~~~~~~~----~~~~~~~~~~v~ 258 (332)
.... ......... ........++++|++..+.++.......+|... ....+..... ..........++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 3221 011112111 112356789999998666555554444444432 1111111110 011223345789
Q ss_pred ECCCC-CEEEEEcCCCcEEEEECCCCceEEEecCCC---------CCCceEEeCCCeeEEEeccce
Q 020021 259 FSPEG-MFVISGSGDGSVYAWSVRSGKEVASWMSFD---------TEPPVIKWTPGSLMFVTGSSE 314 (332)
Q Consensus 259 ~spdg-~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~---------~~v~~l~~sp~~~~l~t~~~d 314 (332)
|.|.. ++++.....+.+-++|.. ++.+..+.-.. ...-.|+|.|+|++.++.-..
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 99865 455555666788899864 56544432111 134669999999988886555
No 287
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.35 E-value=0.037 Score=49.06 Aligned_cols=187 Identities=15% Similarity=0.192 Sum_probs=101.4
Q ss_pred EEEecCCCCeEEEee------------CCCcEEEEeCCC--ceEEEEEEecC--------ce-eEEE-c-CCC--eEEEE
Q 020021 126 SLSLCSSKDCFISGS------------LDRTVLLWDQRA--EKCQGLLRVQG--------RP-AAAY-D-DQG--LVFAV 178 (332)
Q Consensus 126 ~v~~~~~~~~l~s~s------------~Dg~i~iWd~~~--~~~~~~~~~~~--------~~-~~~~-~-~~~--~~~~~ 178 (332)
.+.+.|+|..+++++ .+|.|.++|.++ .+.. .+...+ .+ ...+ . .++ .++.+
T Consensus 54 Di~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~-~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 54 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVS-ELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp EEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEE-ECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred eeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceE-EEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 444566665555542 689999999873 2322 222211 11 1111 1 123 23333
Q ss_pred Ee---CCEEEEEECccCCCCCee-EEEecCC-CCCceeEEEcCCCCEEEEEcC-----------------CCeEEEEEcc
Q 020021 179 AF---GGYIRMFDARKYEKGPFD-IFSVGGD-ISDANVVKFSNDGRLMLLTTM-----------------EGHIHVLDSF 236 (332)
Q Consensus 179 ~~---~~~i~vwd~~~~~~~~~~-~~~~~~~-~~~v~~v~~s~dg~~l~~~~~-----------------dg~i~i~d~~ 236 (332)
-. +..|.+|++..... ... .....+. ....+.+++.++|+++++... .|.++-+|..
T Consensus 133 nh~~~~s~ielf~~d~~~~-~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEK-SLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp ECSTTCCEEEEEEEETTTT-EEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred ECCCCCCeEEEEEEECCCC-EEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 21 45778887654321 122 2223332 235688999999998887651 2566666653
Q ss_pred CCeEeEEeeecCCCCCcceEEEECCCCCEEEEE-cCCCcEEEEECCC-Cce--EEEecCCCCCCceEEeCC-CeeEEEec
Q 020021 237 RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVYAWSVRS-GKE--VASWMSFDTEPPVIKWTP-GSLMFVTG 311 (332)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sg-s~Dg~i~vWd~~~-~~~--~~~~~~~~~~v~~l~~sp-~~~~l~t~ 311 (332)
.-+.+. . .-...+.++||||+++|+.+ +..+.|+.|++.. ++. ...+ .....+.-++..+ +|++.+++
T Consensus 212 ~~~~~~--~----~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 212 DVRVVA--E----GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp CCEEEE--E----EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred eEEEee--c----CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 222211 1 01234579999999877766 5678999999863 332 1223 2344456688888 58887765
Q ss_pred cc---eEEEeccc
Q 020021 312 SS---ELSFWIPD 321 (332)
Q Consensus 312 ~~---d~~~w~~~ 321 (332)
.. .+..++|+
T Consensus 285 ~~~g~~v~~~~P~ 297 (355)
T 3sre_A 285 HPNGMRIFFYDAE 297 (355)
T ss_dssp ESCHHHHHSCCTT
T ss_pred cCCceEEEEECCC
Confidence 32 24444554
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.32 E-value=0.031 Score=48.82 Aligned_cols=155 Identities=13% Similarity=0.150 Sum_probs=98.1
Q ss_pred EEEEecCCCCeEEEe-eCCCcEEEEeCCCceEEEEEEecC----------ceeEEE---cCCCeEEEEEe----------
Q 020021 125 VSLSLCSSKDCFISG-SLDRTVLLWDQRAEKCQGLLRVQG----------RPAAAY---DDQGLVFAVAF---------- 180 (332)
Q Consensus 125 ~~v~~~~~~~~l~s~-s~Dg~i~iWd~~~~~~~~~~~~~~----------~~~~~~---~~~~~~~~~~~---------- 180 (332)
-+++|.+...+|.-+ -..++|..||...+..... ..+. .....+ ++.+.++.+..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 356777744444444 4789999999875543333 2222 124455 46676666543
Q ss_pred ----CCEEEEEECc---cCCCCCeeEEEecC-----------CCCCceeEEEcCCCCEEEEEcCC-CeEEEEEccCCeEe
Q 020021 181 ----GGYIRMFDAR---KYEKGPFDIFSVGG-----------DISDANVVKFSNDGRLMLLTTME-GHIHVLDSFRGTLL 241 (332)
Q Consensus 181 ----~~~i~vwd~~---~~~~~~~~~~~~~~-----------~~~~v~~v~~s~dg~~l~~~~~d-g~i~i~d~~~~~~~ 241 (332)
+..+..+|+. +.+ ......+.. .....+.+++.++|..+++++.- +.|..++... +.+
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~--~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG-~~~ 171 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSK--PVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG-KTV 171 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCC--CSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS-CCE
T ss_pred ccCCCCEEEEEcCCcCCCCC--EEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC-CEE
Confidence 4678899987 332 121222210 11246789999999999999888 8988888663 333
Q ss_pred EEeeecC---CCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCC
Q 020021 242 STYNVKP---VSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283 (332)
Q Consensus 242 ~~~~~~~---~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~ 283 (332)
..+.... ........++++|||+.|+....+|.+..+|+.+.
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 3332211 11112457899999999998877999999999754
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.30 E-value=0.11 Score=48.20 Aligned_cols=248 Identities=11% Similarity=0.142 Sum_probs=138.0
Q ss_pred EEEEEECCC-C-CEEEEEeCCCcEEEEEcCCCeeeEEeeecc---cceeEEEE-------ccCCCEEEEecCCCC----C
Q 020021 37 ISSMDFHKS-S-SYLVTASDDESIRLYDVTAATCLKTINSKK---YGVDLVCF-------TSHPTTVIYSSKNGW----D 100 (332)
Q Consensus 37 I~~i~~s~d-g-~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~---~~v~~~~~-------~~~~~~~~~~s~~g~----d 100 (332)
...|+|+|. + +++++-...+.|++.|+.++.....+.... .....++| .+++..++.+...+. .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 458999983 4 455554445778888988877655443321 23567889 999987777654321 1
Q ss_pred ceeEEEEccC-CceE-----EEeecccccEEEEEecCC-CCeEEEeeCCCcEEEEeCC-------CceE-----------
Q 020021 101 ESLRLLSLHD-NKYL-----RYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQR-------AEKC----------- 155 (332)
Q Consensus 101 ~~v~v~d~~~-~~~~-----~~~~~h~~~V~~v~~~~~-~~~l~s~s~Dg~i~iWd~~-------~~~~----------- 155 (332)
..+.+.+... +... ..+... ....+++++|+ +.++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 2355554333 2221 222211 23356788894 5556666778889999986 4432
Q ss_pred E-EEEEecC---ceeEEEcCCCeEEEEE--eCCEEEEEECccCCC---CCeeEEEe---cC---------CCCCce-eEE
Q 020021 156 Q-GLLRVQG---RPAAAYDDQGLVFAVA--FGGYIRMFDARKYEK---GPFDIFSV---GG---------DISDAN-VVK 213 (332)
Q Consensus 156 ~-~~~~~~~---~~~~~~~~~~~~~~~~--~~~~i~vwd~~~~~~---~~~~~~~~---~~---------~~~~v~-~v~ 213 (332)
. ..+.... ....++++++..+..+ ..+.|+.++...... .+..+... .+ ...... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 1 1222221 1246778877643333 357888866432110 00111111 00 011123 455
Q ss_pred Ec-------CCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC---------------------CCCcceEEEECCC-CC
Q 020021 214 FS-------NDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV---------------------SRNSTLEASFSPE-GM 264 (332)
Q Consensus 214 ~s-------~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------------------~~~~~~~v~~spd-g~ 264 (332)
.. ++|.++++-..+.+|+.++ ..|.. .++..... .-+....++++++ |.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIV-STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEe-CCCCE-EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 54 5788888888899999999 45643 34432210 0123456888886 66
Q ss_pred EEEEEcCCCcEEEEECCCCceEE
Q 020021 265 FVISGSGDGSVYAWSVRSGKEVA 287 (332)
Q Consensus 265 ~l~sgs~Dg~i~vWd~~~~~~~~ 287 (332)
.+++=.....||.+++.....+.
T Consensus 458 lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 458 FYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp EEEEETTTTEEEEEEECCCC---
T ss_pred EEEEeCCCCEEEEEECCCCcccc
Confidence 66666667788888887655543
No 290
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.21 E-value=0.17 Score=48.60 Aligned_cols=203 Identities=8% Similarity=-0.022 Sum_probs=113.0
Q ss_pred CcEEEEEECCCCCE-EEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce
Q 020021 35 GRISSMDFHKSSSY-LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (332)
Q Consensus 35 ~~I~~i~~s~dg~~-l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~ 113 (332)
..+.+|+|++++.. ..+-..++.|..++++.......+.........+++...+..++++.. ..+.|.+.++.....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~--~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT--GTNRIEVSKLDGQHR 114 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET--TTTEEEEEETTSTTC
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEEC--CCCEEEEEecCCCcE
Confidence 45679999986555 456667788888888754333333322234567888877777877643 256788888865443
Q ss_pred EEEeecccccEEEEEecCC-CCeEEEe-eCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECcc
Q 020021 114 LRYFKGHHDRVVSLSLCSS-KDCFISG-SLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARK 191 (332)
Q Consensus 114 ~~~~~~h~~~V~~v~~~~~-~~~l~s~-s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~ 191 (332)
...+......-.++++.|. |..++|- +..+.|...++.......
T Consensus 115 ~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~---------------------------------- 160 (628)
T 4a0p_A 115 QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT---------------------------------- 160 (628)
T ss_dssp EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE----------------------------------
T ss_pred EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE----------------------------------
Confidence 2223344455678888874 4333432 112334333332211000
Q ss_pred CCCCCeeEEEecCCCCCceeEEEcCCCC-EEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEc
Q 020021 192 YEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270 (332)
Q Consensus 192 ~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs 270 (332)
+. ......+.+++++++. ++.+-...+.|..+|+..... ..+.. .......+++.. ++.+.|-.
T Consensus 161 -------l~---~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~---~l~~P~glav~~-~~ly~tD~ 225 (628)
T 4a0p_A 161 -------LV---PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIAD---DLPHPFGLTQYQ-DYIYWTDW 225 (628)
T ss_dssp -------EE---CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEE---CCSCEEEEEEET-TEEEEEET
T ss_pred -------EE---CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeec---cCCCceEEEEEC-CEEEEecC
Confidence 00 0112346788888654 445556667888888764333 22221 112234566654 45555555
Q ss_pred CCCcEEEEECCCCceEEE
Q 020021 271 GDGSVYAWSVRSGKEVAS 288 (332)
Q Consensus 271 ~Dg~i~vWd~~~~~~~~~ 288 (332)
..+.|...|..+++....
T Consensus 226 ~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 226 SRRSIERANKTSGQNRTI 243 (628)
T ss_dssp TTTEEEEEETTTCCSCEE
T ss_pred CCCEEEEEECCCCCceEE
Confidence 677888888766654333
No 291
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.12 E-value=0.14 Score=46.05 Aligned_cols=209 Identities=9% Similarity=0.023 Sum_probs=120.6
Q ss_pred cCCCcEEEEEECCCCCE-EEEEeCCCcEEEEEcCCCe----eeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEE
Q 020021 32 DYNGRISSMDFHKSSSY-LVTASDDESIRLYDVTAAT----CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (332)
Q Consensus 32 ~h~~~I~~i~~s~dg~~-l~tgs~D~tv~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~ 106 (332)
..-..+.+|+|++.+.. ..+-...+.|..+++.... ....+.........+++...+..++++.. ..+.|.+.
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~--~~~~I~~~ 186 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS--VLGTVSVA 186 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEE
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEEC--CCCeEEEE
Confidence 34456789999986554 4555567888888886521 22222223334567888877777777643 25688898
Q ss_pred EccCCceEEEeecccccEEEEEecCCCC-eEEEeeC-CCcEEEEeCCCceEEEEEEe--cCceeEEEcCC-CeEEEEEe-
Q 020021 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSL-DRTVLLWDQRAEKCQGLLRV--QGRPAAAYDDQ-GLVFAVAF- 180 (332)
Q Consensus 107 d~~~~~~~~~~~~h~~~V~~v~~~~~~~-~l~s~s~-Dg~i~iWd~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~- 180 (332)
++........+........++++.|.+. +++|-.. .+.|...++........+.. .......+++. +.++.+-.
T Consensus 187 ~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~ 266 (400)
T 3p5b_L 187 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 266 (400)
T ss_dssp CTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC
Confidence 9876554444444455678999998555 4444422 36788888764432222221 12234566644 34433332
Q ss_pred CCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEee
Q 020021 181 GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (332)
Q Consensus 181 ~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (332)
.+.|..+|+.-.. ...+............+++ ..+.++.+....+.|..+|..+|+.+..+.
T Consensus 267 ~~~I~~~d~dG~~--~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 267 LHSISSIDVNGGN--RKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp TTEEEEEETTSCC--CEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred CCEEEEEeCCCCc--cEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 4788888875321 1222222122233456666 345666677777889999977777665553
No 292
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.96 E-value=0.28 Score=46.87 Aligned_cols=224 Identities=13% Similarity=0.092 Sum_probs=120.3
Q ss_pred CCcEEEEEcCCCeeeEE-eeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCce-EEEeecccccEEEEEecCC
Q 020021 55 DESIRLYDVTAATCLKT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-LRYFKGHHDRVVSLSLCSS 132 (332)
Q Consensus 55 D~tv~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~-~~~~~~h~~~V~~v~~~~~ 132 (332)
...|+.-|+.......+ +.........+++.+....++++... .+.|..++++.... ...+..-.....++++.+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~--~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS--EEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETT--TTEEEEEEC-----CEEEECSSCSCEEEEEEETT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECC--CCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec
Confidence 45567767664321111 11222235677888888888887532 46788888866432 2233333356788999885
Q ss_pred -CCeEEEeeCCCcEEEEeCCCceEEEEEE--ecCceeEEEcCC-CeEEEEEeC--CEEEEEECccCCCCCeeEEEecCCC
Q 020021 133 -KDCFISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQ-GLVFAVAFG--GYIRMFDARKYEKGPFDIFSVGGDI 206 (332)
Q Consensus 133 -~~~l~s~s~Dg~i~iWd~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~--~~i~vwd~~~~~~~~~~~~~~~~~~ 206 (332)
++..++-...+.|.+-++........+. +......++++. +.++.+..+ +.|...++.-.. ...+. ....
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~--~~~l~--~~~~ 170 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS--RFIII--NSEI 170 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEEEE--CSSC
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc--eEEEE--eCCC
Confidence 4455666677899999986554332221 112224556553 545444432 456555543211 11111 1122
Q ss_pred CCceeEEEcCCC-CEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCce
Q 020021 207 SDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKE 285 (332)
Q Consensus 207 ~~v~~v~~s~dg-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~ 285 (332)
...+.+++++++ +++.+-...+.|..+|+........... .......+++..+ +.+.+-...+.|...|..+++.
T Consensus 171 ~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~---~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 171 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG---SLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred CCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeC---CCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 345789999865 5555556678899999865433222111 1122346777666 5555556678899999887765
Q ss_pred EEE
Q 020021 286 VAS 288 (332)
Q Consensus 286 ~~~ 288 (332)
+..
T Consensus 247 ~~~ 249 (619)
T 3s94_A 247 LRE 249 (619)
T ss_dssp CEE
T ss_pred cEE
Confidence 444
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.91 E-value=0.0065 Score=59.20 Aligned_cols=205 Identities=9% Similarity=0.052 Sum_probs=111.6
Q ss_pred cEEEEEECCCCCEE-EEEeCCCcEEEEEcCC----CeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC
Q 020021 36 RISSMDFHKSSSYL-VTASDDESIRLYDVTA----ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 110 (332)
Q Consensus 36 ~I~~i~~s~dg~~l-~tgs~D~tv~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~ 110 (332)
.+.+|+|++++..| ++-...+.|+.+++.. ......+.........+++...+..++++.. ..+.|.+.++..
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~--~~~~I~v~d~dg 484 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS--VLGTVSVADTKG 484 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCT--TTSCEEEEBSSS
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEec--cCCeEEEEecCC
Confidence 45578898866555 4445567899998875 2222222111122445677766666666532 256788998876
Q ss_pred CceEEEeecccccEEEEEecCCCC-eEEEeeCC-CcEEEEeCCCceEEEEEE--ecCceeEEEcCC-CeEEEEE-eCCEE
Q 020021 111 NKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLD-RTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQ-GLVFAVA-FGGYI 184 (332)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~~~~~~~-~l~s~s~D-g~i~iWd~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~-~~~~i 184 (332)
......+.........+++.|.+. ++++-... +.|...++........+. +......++++. +.++.+- ..+.|
T Consensus 485 ~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 485 VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 543333333334557888888544 44444333 677777764332211111 112234566654 3443333 35789
Q ss_pred EEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEee
Q 020021 185 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (332)
Q Consensus 185 ~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (332)
..+++.... ...+............+++..+ .++++....+.|..+|..+|+.+..+.
T Consensus 565 ~~~d~dG~~--~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 565 SSIDVNGGN--RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EEECSSSSC--CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEEccCCCc--eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 998875321 1111111111122344566543 555666677899999988888776553
No 294
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.91 E-value=0.19 Score=43.84 Aligned_cols=233 Identities=9% Similarity=0.061 Sum_probs=112.3
Q ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeee---cccceeEEEEccCCCEEEEecCCCCCceeEEEEccC
Q 020021 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS---KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 110 (332)
Q Consensus 34 ~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~ 110 (332)
...+.+|.|++ +..++ ++.++.|.. ..+.|+.=..+.. ....+..+.+.+++..++.+. ++.+.. ....
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~g~v~~-S~Dg 150 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN----VGAIYR-TKDS 150 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET----TCCEEE-ESST
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC----CccEEE-EcCC
Confidence 44688999986 44444 456664433 3333332222211 112344455555554444332 222211 1222
Q ss_pred Cc-eEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe---cCceeEEEcCCCeEEEEEeCCEEEE
Q 020021 111 NK-YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV---QGRPAAAYDDQGLVFAVAFGGYIRM 186 (332)
Q Consensus 111 ~~-~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~v 186 (332)
++ -.....++...+..+.+.+++..++.+...+..+-+|-...... .+.. .......+.+++.++.++.++.+..
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~-~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~ 229 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWE-PHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAF 229 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCE-EEECCSSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCcee-ECCCCCCCccceeEECCCCCEEEEeCCceEEE
Confidence 32 22223355667889999998877766654444444542111111 1111 1122344556677777777777766
Q ss_pred EECccCCCCCeeEEEec--CCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCC
Q 020021 187 FDARKYEKGPFDIFSVG--GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 264 (332)
Q Consensus 187 wd~~~~~~~~~~~~~~~--~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~ 264 (332)
.+..... ........ .....+..+.+.+++++++++. +|.+.. ....|+.-...............+.|.++++
T Consensus 230 s~~D~G~--tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~ 305 (327)
T 2xbg_A 230 SDPDNSE--NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALLC-SQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ 305 (327)
T ss_dssp EETTEEE--EECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEEE-ESSTTSSCEECGGGTTSSSCCCEEEEEETTE
T ss_pred ecCCCCC--eeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEEE-eCCCCcccEEcCccCCCCCCeEEEEEECCCc
Confidence 5311000 00000000 0112467788888888777665 666643 3344443322221111123456788876655
Q ss_pred EEEEEcCCCcEEEEEC
Q 020021 265 FVISGSGDGSVYAWSV 280 (332)
Q Consensus 265 ~l~sgs~Dg~i~vWd~ 280 (332)
++.++.+|.|.-++-
T Consensus 306 -~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 306 -GFILGQKGILLRYVT 320 (327)
T ss_dssp -EEEECSTTEEEEECC
T ss_pred -eEEEcCCceEEEEcC
Confidence 555667898776653
No 295
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.89 E-value=0.19 Score=43.71 Aligned_cols=197 Identities=8% Similarity=-0.031 Sum_probs=109.2
Q ss_pred CceeEEEEccCCc-eEEEeecccccEEEEEecCC-CCeEEEeeCCCcEEEEeCCCceEE-EEEEe--cCceeEEEcC-CC
Q 020021 100 DESLRLLSLHDNK-YLRYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQ-GLLRV--QGRPAAAYDD-QG 173 (332)
Q Consensus 100 d~~v~v~d~~~~~-~~~~~~~h~~~V~~v~~~~~-~~~l~s~s~Dg~i~iWd~~~~~~~-~~~~~--~~~~~~~~~~-~~ 173 (332)
.+.|+..++.... ....+........+++|.+. +..+++-...+.|..+++...... ..+.. ......+++. .+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 3578888887753 12222223345678999984 556667677789999998765321 11211 1222455554 44
Q ss_pred eEEEEE-eCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEc--CCCeEEEEEccCCeEeEEeeecCCC
Q 020021 174 LVFAVA-FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVS 250 (332)
Q Consensus 174 ~~~~~~-~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~ 250 (332)
.++.+. ..+.|.+++..... .... ........+.+++.|.+..+..+. ..+.|..+++.. .....+.. ..
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~---~~~l-~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~--~~ 164 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSL---RKVL-FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIIN--SE 164 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCS---CEEE-ECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEEC--SS
T ss_pred eEEEEECCCCEEEEEECCCCc---EEEE-EeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEE--CC
Confidence 444333 35788888875321 1111 112233557899998655444443 367899998763 32222211 11
Q ss_pred CCcceEEEECCCCCEEEEE-cCCCcEEEEECCCCceEEEecC-CCCCCceEEeCCC
Q 020021 251 RNSTLEASFSPEGMFVISG-SGDGSVYAWSVRSGKEVASWMS-FDTEPPVIKWTPG 304 (332)
Q Consensus 251 ~~~~~~v~~spdg~~l~sg-s~Dg~i~vWd~~~~~~~~~~~~-~~~~v~~l~~sp~ 304 (332)
-.....++++|++..|+-+ +..+.|..+|+.. .....+.. .-..+..+++..+
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~glav~~~ 219 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLFED 219 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSCCSCEEEEEEETT
T ss_pred CCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-CceEEEecCCCCCceEEEEeCC
Confidence 2344679999976655555 5667899999853 32333221 2233455665443
No 296
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.87 E-value=0.2 Score=43.65 Aligned_cols=263 Identities=11% Similarity=0.081 Sum_probs=130.4
Q ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEee----ecccceeEEEEccCCCEEEEecCCCCCceeEEEEc
Q 020021 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN----SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (332)
Q Consensus 33 h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~ 108 (332)
-...+.+|.|.+++..++ ++.++.| +...+.|+.=+... .....+..+.+.+ ..++.+.. .+.+.. ..
T Consensus 34 ~~~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g~---~g~i~~-S~ 105 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVGE---PPIMLH-TT 105 (327)
T ss_dssp CSSCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEEE---TTEEEE-ES
T ss_pred CCCcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEEEC---CCeEEE-EC
Confidence 345799999987777777 5667754 33344343211111 1123456677764 33333321 232322 22
Q ss_pred cCCceEEEee---cccccEEEEEecCCCCeEEEeeCCCcE-EEEeCCCceEEEEEEec---CceeEEEcCCCeEEEEEeC
Q 020021 109 HDNKYLRYFK---GHHDRVVSLSLCSSKDCFISGSLDRTV-LLWDQRAEKCQGLLRVQ---GRPAAAYDDQGLVFAVAFG 181 (332)
Q Consensus 109 ~~~~~~~~~~---~h~~~V~~v~~~~~~~~l~s~s~Dg~i-~iWd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 181 (332)
..++.-..+. .+...+..+.+.++++.++.+ .++.| +-+| .++.-...... ......+.+++.+++++..
T Consensus 106 DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 182 (327)
T 2xbg_A 106 DGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSR 182 (327)
T ss_dssp STTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETT
T ss_pred CCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECC
Confidence 2233211111 233456777777666655554 45554 3333 12111111111 1223445566667766655
Q ss_pred CEE-EEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecC-CCCCcceEEEE
Q 020021 182 GYI-RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP-VSRNSTLEASF 259 (332)
Q Consensus 182 ~~i-~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~~v~~ 259 (332)
+.+ +..|-. ........ ......+..+.+++++++++.+ .+|.++..+...|+.-....... .....+..+++
T Consensus 183 G~~~~S~d~g---G~tW~~~~-~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~ 257 (327)
T 2xbg_A 183 GSFYSTWEPG---QTAWEPHN-RTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAY 257 (327)
T ss_dssp SSEEEEECTT---CSSCEEEE-CCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEE
T ss_pred CcEEEEeCCC---CCceeECC-CCCCCccceeEECCCCCEEEEe-CCceEEEecCCCCCeeEeccCCcccCCcceEEEEe
Confidence 543 333320 01111111 1223456788899999876554 57777776423243322222110 11234667889
Q ss_pred CCCCCEEEEEcCCCcEEEEECCCCceEEEec---CCCCCCceEEeCCCeeEEEeccc
Q 020021 260 SPEGMFVISGSGDGSVYAWSVRSGKEVASWM---SFDTEPPVIKWTPGSLMFVTGSS 313 (332)
Q Consensus 260 spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~---~~~~~v~~l~~sp~~~~l~t~~~ 313 (332)
.|++..++.+. +|.|+ +....++.=..+. .....+..+.|.++++.++.+..
T Consensus 258 ~~~~~~~~~g~-~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~ 312 (327)
T 2xbg_A 258 RTPNEVWLAGG-AGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQK 312 (327)
T ss_dssp SSSSCEEEEES-TTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECST
T ss_pred cCCCEEEEEeC-CCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCC
Confidence 99888877664 67773 4444444322222 23456788999776666655543
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.80 E-value=0.39 Score=45.94 Aligned_cols=267 Identities=10% Similarity=0.050 Sum_probs=139.5
Q ss_pred CcEEEEEECCCCCEEEEEeCC--CcEEEEEcCCCeeeEEee-ecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCC
Q 020021 35 GRISSMDFHKSSSYLVTASDD--ESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN 111 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D--~tv~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~ 111 (332)
.....|+++|.+.+|.-+.+. ..|...+.+ |.....+. ..-.....+++.+....++++-. ..+.|...|+...
T Consensus 127 ~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~--~~~~I~~~~~dG~ 203 (619)
T 3s94_A 127 DQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGT 203 (619)
T ss_dssp SCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSSEEEEEEETTTTEEEEEET--TTCCEEEESSSCC
T ss_pred CCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCceEEEEeCCCCCCcEEEEEccCCEEEEEeC--CCCeEEEecCCCC
Confidence 345678898875555444433 344444544 33333332 22334677899988888888753 3567888888654
Q ss_pred ceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe------------c-----C-ce--------
Q 020021 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV------------Q-----G-RP-------- 165 (332)
Q Consensus 112 ~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~------------~-----~-~~-------- 165 (332)
.......+....-.++++..+ ...+|-...+.|..-|..+++....+.. + . .+
T Consensus 204 ~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~C 282 (619)
T 3s94_A 204 NRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGC 282 (619)
T ss_dssp EEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGC
T ss_pred ccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcc
Confidence 433222222222345565544 4455555566777777655432211100 0 0 00
Q ss_pred --eEEEcC-------------------------CCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcC-C
Q 020021 166 --AAAYDD-------------------------QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN-D 217 (332)
Q Consensus 166 --~~~~~~-------------------------~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~-d 217 (332)
.+...+ ...++..+..+.|+..++........ ...+. ......+++|.+ +
T Consensus 283 s~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~-~~~~~-~l~~~~~ld~d~~~ 360 (619)
T 3s94_A 283 SHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDI-VLQLE-DIRHAIAIDYDPVE 360 (619)
T ss_dssp SSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCE-ECCCS-CCSSEEEEEEETTT
T ss_pred cceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCCcccee-EEecc-ccCccEEEEEEcCC
Confidence 000000 11234444455666666653321111 11111 123456788987 4
Q ss_pred CCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCC-CCEEEEEcCCCcEEEEECCCCceEEEec-CCCCC
Q 020021 218 GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE-GMFVISGSGDGSVYAWSVRSGKEVASWM-SFDTE 295 (332)
Q Consensus 218 g~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spd-g~~l~sgs~Dg~i~vWd~~~~~~~~~~~-~~~~~ 295 (332)
++++.+-...+.|+.+++.......... ........+|+.+. ++.+.+-+..+.|.+.++.. +....+. ..-..
T Consensus 361 ~~ly~sD~~~~~I~r~~~~g~~~~~v~~---~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G-~~~~~l~~~~l~~ 436 (619)
T 3s94_A 361 GYIYWTDDEVRAIRRSFIDGSGSQFVVT---AQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG-TMRKILISEDLEE 436 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEC---SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECTTCCS
T ss_pred CeEEEEeCCCCeEEEEEcCCCccEEEEE---CCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC-CeEEEEEECCCCC
Confidence 5666666678899999876533222221 11234457888864 45555556778999999864 3333332 22235
Q ss_pred CceEEeCCC-eeEEEec
Q 020021 296 PPVIKWTPG-SLMFVTG 311 (332)
Q Consensus 296 v~~l~~sp~-~~~l~t~ 311 (332)
+..|++.|. |.+++|.
T Consensus 437 P~~iavdp~~G~ly~tD 453 (619)
T 3s94_A 437 PRAIVLDPMVGYMYWTD 453 (619)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred eeeEEEEcCCCcEEEec
Confidence 688999985 7777775
No 298
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.76 E-value=0.27 Score=43.52 Aligned_cols=205 Identities=11% Similarity=0.245 Sum_probs=103.6
Q ss_pred EEEEECCCCCEEEEEe------------CCCcEEEEEcCC--CeeeEEee--e-----cccceeEEEEcc--CCC-EEEE
Q 020021 38 SSMDFHKSSSYLVTAS------------DDESIRLYDVTA--ATCLKTIN--S-----KKYGVDLVCFTS--HPT-TVIY 93 (332)
Q Consensus 38 ~~i~~s~dg~~l~tgs------------~D~tv~iwd~~~--~~~~~~~~--~-----~~~~v~~~~~~~--~~~-~~~~ 93 (332)
-.|.+.|+|..+++++ .+|.|.++|..+ ++. ..+. + .......+.+.+ ++. .++.
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 4566788775554442 789999999873 222 2222 1 123455666655 343 4555
Q ss_pred ecCCCCCceeEEEEccCCc-e---EEEeecc-cccEEEEEecCCCCeEEEeeC---CCcEEEEeCCCceEEEEEEecCce
Q 020021 94 SSKNGWDESLRLLSLHDNK-Y---LRYFKGH-HDRVVSLSLCSSKDCFISGSL---DRTVLLWDQRAEKCQGLLRVQGRP 165 (332)
Q Consensus 94 ~s~~g~d~~v~v~d~~~~~-~---~~~~~~h-~~~V~~v~~~~~~~~l~s~s~---Dg~i~iWd~~~~~~~~~~~~~~~~ 165 (332)
......+.++.+|++..+. . +..+.+. -...+.+.+.++|.+.++... |...+.|+.-.+.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~----------- 200 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGL----------- 200 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTC-----------
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccC-----------
Confidence 5433235678888776532 2 2233332 235678888888876666431 1100111100000
Q ss_pred eEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEE-EEcCCCeEEEEEccC-CeEe--
Q 020021 166 AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLML-LTTMEGHIHVLDSFR-GTLL-- 241 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~-~~~~dg~i~i~d~~~-~~~~-- 241 (332)
+. +.|..+|.. ..... .......+.++|||||+.+. +-+..++|+.||+.. +++.
T Consensus 201 -----~~---------g~vyr~d~~-----~~~~~--~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~ 259 (355)
T 3sre_A 201 -----AW---------SFVTYYSPN-----DVRVV--AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPL 259 (355)
T ss_dssp -----CC---------EEEEEECTT-----CCEEE--EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred -----Cc---------cEEEEEECC-----eEEEe--ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecC
Confidence 00 011111110 00000 00112357899999997554 556788999999863 3332
Q ss_pred EEeeecCCCCCcceEEEECC-CCCEEEEEcCCC-cEEEEE
Q 020021 242 STYNVKPVSRNSTLEASFSP-EGMFVISGSGDG-SVYAWS 279 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~v~~sp-dg~~l~sgs~Dg-~i~vWd 279 (332)
..+. . ....-.+++.+ +|++.+++..++ .|..|+
T Consensus 260 ~~~~---~-~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 260 RVLS---F-DTLVDNISVDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp EEEE---C-SSEEEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred EEEe---C-CCCCceEEEeCCCCcEEEEecCCceEEEEEC
Confidence 2221 1 23344678888 599888775443 333333
No 299
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.74 E-value=0.31 Score=43.98 Aligned_cols=138 Identities=13% Similarity=0.195 Sum_probs=84.8
Q ss_pred EEEeCCEEEEEECccCCCCCeeEEEecC--CCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCe------------EeE
Q 020021 177 AVAFGGYIRMFDARKYEKGPFDIFSVGG--DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT------------LLS 242 (332)
Q Consensus 177 ~~~~~~~i~vwd~~~~~~~~~~~~~~~~--~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~------------~~~ 242 (332)
..+.++.||.-++... ..+....... ...++..+..||+|+++|..+.. .|.|..+..+. ...
T Consensus 36 ~~a~~n~iR~~~i~~~--~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ 112 (452)
T 3pbp_A 36 VFIQDNIIRWYNVLTD--SLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIF 112 (452)
T ss_dssp EEEETTEEEEEETTTC--SSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEE
T ss_pred EEEECCEEEEEECCCC--CcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCccccccccccee
Confidence 3445667777666532 2344444432 22367789999999999988554 88888876321 112
Q ss_pred EeeecCC---CCCcceEEEECCC---CCEEEEEcCCCcEEEEECCCCce-EEEec---------CCCCCCceEEeCCCee
Q 020021 243 TYNVKPV---SRNSTLEASFSPE---GMFVISGSGDGSVYAWSVRSGKE-VASWM---------SFDTEPPVIKWTPGSL 306 (332)
Q Consensus 243 ~~~~~~~---~~~~~~~v~~spd---g~~l~sgs~Dg~i~vWd~~~~~~-~~~~~---------~~~~~v~~l~~sp~~~ 306 (332)
.+...+. ...++..+.|+|- +..|++-.+|++||+||+..... ...+. .....+.+++|++++.
T Consensus 113 ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~l 192 (452)
T 3pbp_A 113 HYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGL 192 (452)
T ss_dssp EEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSS
T ss_pred EEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCc
Confidence 3333221 2456888999994 46888899999999999975221 11221 1224567889999874
Q ss_pred --EEEec--cceEEE
Q 020021 307 --MFVTG--SSELSF 317 (332)
Q Consensus 307 --~l~t~--~~d~~~ 317 (332)
++.+. ++|+..
T Consensus 193 TLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 193 TLYCLNTTEGGDIFA 207 (452)
T ss_dssp CEEEEECTTSCEEEE
T ss_pred EEEEEecCCCCCEEE
Confidence 34343 345443
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.66 E-value=0.41 Score=44.31 Aligned_cols=236 Identities=11% Similarity=0.103 Sum_probs=131.0
Q ss_pred eEEEEcc-CCCEEEEecCCCCCceeEEEEccCCceEEEeec---ccccEEEEEe-------cCCCCeEEEeeCCC-----
Q 020021 80 DLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG---HHDRVVSLSL-------CSSKDCFISGSLDR----- 143 (332)
Q Consensus 80 ~~~~~~~-~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~---h~~~V~~v~~-------~~~~~~l~s~s~Dg----- 143 (332)
..++|.| +...++.+... .+.|++.|++.+.....+.. .......++| .+++++|+.+.+.+
T Consensus 142 ~~la~dp~~~~~Lyv~~~~--~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDG--HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEETTEEEEEEEEEET--EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CEEEEccCCCCEEEEEECC--CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4677887 35555555421 35688889888765544332 2345899999 99998666555443
Q ss_pred --cEEEEeCCC-ceEE-----EEE-EecCceeEEEcC-CCeEEEEE-eCCEEEEEECc-------cCCC-C---C-----
Q 020021 144 --TVLLWDQRA-EKCQ-----GLL-RVQGRPAAAYDD-QGLVFAVA-FGGYIRMFDAR-------KYEK-G---P----- 196 (332)
Q Consensus 144 --~i~iWd~~~-~~~~-----~~~-~~~~~~~~~~~~-~~~~~~~~-~~~~i~vwd~~-------~~~~-~---~----- 196 (332)
.|.+.+... +... ..+ ..........++ ++.++.+. ..+.|..+|+. .... . +
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255655333 1211 111 222223455666 45555555 45789999986 2211 0 0
Q ss_pred e-eEEEecCCCCCceeEEEcCCCC-EEEEEcCCCeEEEEEcc--CCeEe--EEeeecCCC------------CCcce-EE
Q 020021 197 F-DIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSF--RGTLL--STYNVKPVS------------RNSTL-EA 257 (332)
Q Consensus 197 ~-~~~~~~~~~~~v~~v~~s~dg~-~l~~~~~dg~i~i~d~~--~~~~~--~~~~~~~~~------------~~~~~-~v 257 (332)
+ .++... .......++|+|+|+ ++++-+....|+.+|.. .+... ..+...... -+... .+
T Consensus 300 ~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 300 FKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp EEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred cceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 1 223332 223357899999999 46666778899996653 33321 122211000 01122 34
Q ss_pred EEC-------CCCCEEEEEcCCCcEEEEECCCCceEEEecCCC------------------------CCCceEEeCCC-e
Q 020021 258 SFS-------PEGMFVISGSGDGSVYAWSVRSGKEVASWMSFD------------------------TEPPVIKWTPG-S 305 (332)
Q Consensus 258 ~~s-------pdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~------------------------~~v~~l~~sp~-~ 305 (332)
+.. ++|.++++=....+|+.++ .++. +.++.+.. ..+..|++.++ +
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 454 5677777767788999998 4563 55543220 12356889986 7
Q ss_pred eEEEeccce--EEEecc
Q 020021 306 LMFVTGSSE--LSFWIP 320 (332)
Q Consensus 306 ~~l~t~~~d--~~~w~~ 320 (332)
.++++-... ++.+++
T Consensus 457 ~lyVaD~~N~rIrki~~ 473 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISM 473 (496)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCEEEEEEC
Confidence 777776554 444444
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.58 E-value=0.35 Score=42.56 Aligned_cols=183 Identities=10% Similarity=0.164 Sum_probs=100.9
Q ss_pred CCCeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcC----CCe---EEEEE--e--CCEEEEEECccCCCCCeeEE
Q 020021 132 SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDD----QGL---VFAVA--F--GGYIRMFDARKYEKGPFDIF 200 (332)
Q Consensus 132 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~--~--~~~i~vwd~~~~~~~~~~~~ 200 (332)
...+++....++-+.++|+ +++.+..+.....+.+...+ .+. ++.++ . +++|++|++.... .++...
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~-~~l~~i 116 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN-GTLQSM 116 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT-CCEEEC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC-Cceeec
Confidence 3345666666778999998 66665555332222222211 111 22233 2 4789999773211 122222
Q ss_pred E-----ecCCCCCceeEEE--cCC-CC-EEEEEcCCCeEEEEEc-------cCCeEeEEeeecCCCCCcceEEEECCCCC
Q 020021 201 S-----VGGDISDANVVKF--SND-GR-LMLLTTMEGHIHVLDS-------FRGTLLSTYNVKPVSRNSTLEASFSPEGM 264 (332)
Q Consensus 201 ~-----~~~~~~~v~~v~~--s~d-g~-~l~~~~~dg~i~i~d~-------~~~~~~~~~~~~~~~~~~~~~v~~spdg~ 264 (332)
. +......+..+|+ +|. ++ ++.+...+|.+..|++ .++++++++...+ .+-.+...+...
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs----q~EgcvvDd~~g 192 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS----QTEGMAADDEYG 192 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS----CEEEEEEETTTT
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC----CcceEEEcCCCC
Confidence 1 0011134566777 774 54 6777888899999888 3445667766532 344577888889
Q ss_pred EEEEEcCCCcEEEEECC-----CCceEEEec--CCCCCCceEEe--CCCee--EEEeccc--eEEEecc
Q 020021 265 FVISGSGDGSVYAWSVR-----SGKEVASWM--SFDTEPPVIKW--TPGSL--MFVTGSS--ELSFWIP 320 (332)
Q Consensus 265 ~l~sgs~Dg~i~vWd~~-----~~~~~~~~~--~~~~~v~~l~~--sp~~~--~l~t~~~--d~~~w~~ 320 (332)
+|+.+-+|.-|..++.. +++.+..+. ...+.+..|++ .++++ ++++.-. ...+++.
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 99999888666555643 233444331 12235666777 45544 4444312 2666655
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.54 E-value=0.37 Score=42.42 Aligned_cols=225 Identities=11% Similarity=0.100 Sum_probs=115.7
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCee--eEEee---ecccceeEEEEccC---CCEEEEecCCCCC---ceeE
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATC--LKTIN---SKKYGVDLVCFTSH---PTTVIYSSKNGWD---ESLR 104 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~~~~~s~~g~d---~~v~ 104 (332)
.-..|+|.|+|+++++ ..++.|++++ +++. +..+. ........++++|+ +..++.+.....+ +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 3568999999986665 5569999998 4442 11111 11235677899987 5555554321101 5677
Q ss_pred EEEccCCc-----eEE-Eee---cccccEEEEEecCCCCeEEEeeC-------------CCcEEEEeCCCc---------
Q 020021 105 LLSLHDNK-----YLR-YFK---GHHDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAE--------- 153 (332)
Q Consensus 105 v~d~~~~~-----~~~-~~~---~h~~~V~~v~~~~~~~~l~s~s~-------------Dg~i~iWd~~~~--------- 153 (332)
.++...+. .+. .+. +.......+.|.|||...++-+. .|.|.-.|....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 77766431 111 122 11123368999999987777542 145555554320
Q ss_pred ---eEEEEEEecC--ceeEEEcC-CCeEEEEEeC-CE--------EEEEECcc-C-------------CCCCeeEEEecC
Q 020021 154 ---KCQGLLRVQG--RPAAAYDD-QGLVFAVAFG-GY--------IRMFDARK-Y-------------EKGPFDIFSVGG 204 (332)
Q Consensus 154 ---~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~-~~--------i~vwd~~~-~-------------~~~~~~~~~~~~ 204 (332)
.....+.... .....+++ .+.++.+-.. +. |.....-. + ...+. .....
T Consensus 189 ~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~--~~~~~ 266 (352)
T 2ism_A 189 RRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL--YFWPQ 266 (352)
T ss_dssp CTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS--EECTT
T ss_pred CCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCe--EecCC
Confidence 0001111111 12345666 5555554432 22 33322110 0 00011 11111
Q ss_pred CCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCe----E--eEEeeecCCCCCcceEEEECCCCCEEEEEc
Q 020021 205 DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT----L--LSTYNVKPVSRNSTLEASFSPEGMFVISGS 270 (332)
Q Consensus 205 ~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~----~--~~~~~~~~~~~~~~~~v~~spdg~~l~sgs 270 (332)
......++| .+|.++++.-..+.|...++.... . ...+. .....+..+++.|||..+++..
T Consensus 267 -~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~---~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 267 -GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL---SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp -CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE---ESSCCEEEEEECTTSCEEEEEC
T ss_pred -CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec---ccCCCeeEEEECCCCcEEEEEe
Confidence 122355677 578888877778888888765332 1 11221 1124567899999998776653
No 303
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.48 E-value=0.39 Score=41.86 Aligned_cols=230 Identities=15% Similarity=0.227 Sum_probs=132.5
Q ss_pred ECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC-CceEEEeecc
Q 020021 42 FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLRYFKGH 120 (332)
Q Consensus 42 ~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~-~~~~~~~~~h 120 (332)
.+|..+.||-=+ -+++.|+|+++.+.++.+.... .|.--.|-... .+..-. +..|.-|+++. ..+.+.+..|
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~-~L~lVT----~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVALVT----DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSSS-EEEEEE----SSEEEEEESSTTCCCEEEEECC
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCCC-eEEEEc----CCcEEEEcccCCCCCceeeecc
Confidence 478888777655 6899999999998887766543 33333444333 333322 45799999975 4577777766
Q ss_pred cc----cEEEEEecCCCCeEEEee-------CCCcEEEEeCCCceEEEEEEecCceeEEEc-----CCCeEEEEEe----
Q 020021 121 HD----RVVSLSLCSSKDCFISGS-------LDRTVLLWDQRAEKCQGLLRVQGRPAAAYD-----DQGLVFAVAF---- 180 (332)
Q Consensus 121 ~~----~V~~v~~~~~~~~l~s~s-------~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---- 180 (332)
.. .|..-..+++.++++-.| -.|.+.++..+.+... .+..+......+. .+..+++-+.
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ-~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 225 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 225 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE-EECCSEEEEEEECCTTCSSCEEEEEEEEEETT
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccc-eeeeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 53 577777788888655333 2467888887655432 2221111111111 1223444332
Q ss_pred CCEEEEEECccC--CCCCeeEE--EecCCC---C-CceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCC
Q 020021 181 GGYIRMFDARKY--EKGPFDIF--SVGGDI---S-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252 (332)
Q Consensus 181 ~~~i~vwd~~~~--~~~~~~~~--~~~~~~---~-~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 252 (332)
++++++.++... ..+++... .+.-.+ . =-.++.+|+.-..+..-+.-|.|+++|+.+|.++...+. ...
T Consensus 226 g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrI---S~d 302 (365)
T 2xzh_A 226 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI---SGE 302 (365)
T ss_dssp EEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC---CSS
T ss_pred CcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEecc---CCC
Confidence 268999998543 22233211 111110 1 124567788778888889999999999999999876653 233
Q ss_pred cceEEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 253 STLEASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 253 ~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
++...+...+..-++.....|.|.--.+..
T Consensus 303 ~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 303 TIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp CEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred ceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 443333333333333344455444444433
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.46 E-value=0.43 Score=42.13 Aligned_cols=233 Identities=12% Similarity=0.097 Sum_probs=119.4
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCe-eeEEee---ecccceeEEEEccC---CCEEEEecCC-CCC----cee
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAAT-CLKTIN---SKKYGVDLVCFTSH---PTTVIYSSKN-GWD----ESL 103 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~~~~~s~~-g~d----~~v 103 (332)
....|+|.|+|+++++ ..++.|+++| .+++ .+..+. ........++++|+ +..++.+... ..+ +.|
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 4668999999986655 5569999887 3454 222211 12235677899987 5555554321 112 456
Q ss_pred EEEEccCC--c---e--E-EEee-cccccEEEEEecCCCCeEEEeeC-------------CCcEEEEeCCCce-------
Q 020021 104 RLLSLHDN--K---Y--L-RYFK-GHHDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAEK------- 154 (332)
Q Consensus 104 ~v~d~~~~--~---~--~-~~~~-~h~~~V~~v~~~~~~~~l~s~s~-------------Dg~i~iWd~~~~~------- 154 (332)
..++...+ . . + ..+. +.......+.|.|||+..++-+. .|.|.-.+....-
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 66666543 1 1 1 1121 11123467899999987777543 2344444443210
Q ss_pred EEEEEEec--CceeEEEcC-CCeEEEEEeC----CEEEEEECcc-C-------C--CCC--eeEEEecCCCCCceeEEE-
Q 020021 155 CQGLLRVQ--GRPAAAYDD-QGLVFAVAFG----GYIRMFDARK-Y-------E--KGP--FDIFSVGGDISDANVVKF- 214 (332)
Q Consensus 155 ~~~~~~~~--~~~~~~~~~-~~~~~~~~~~----~~i~vwd~~~-~-------~--~~~--~~~~~~~~~~~~v~~v~~- 214 (332)
....+... ......+++ .+.++.+-.. ..|.+...-. + . ... ...............++|
T Consensus 188 ~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y 267 (354)
T 3a9g_A 188 NSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFV 267 (354)
T ss_dssp TCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEEC
T ss_pred CCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEE
Confidence 00111111 112456666 5565554432 2344332110 0 0 000 001111011123456777
Q ss_pred ------cCCCCEEEEEcCCCeEEEEEccCC-eEeEEeeecCCCCCcceEEEECCCCCEEEEEc
Q 020021 215 ------SNDGRLMLLTTMEGHIHVLDSFRG-TLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 270 (332)
Q Consensus 215 ------s~dg~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs 270 (332)
..+|.++++.-..+.|..+++... +..............+..+++.|||..+++..
T Consensus 268 ~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 268 HGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 367888888888889999988642 33211111111234567899999998777664
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.35 E-value=0.41 Score=40.73 Aligned_cols=94 Identities=14% Similarity=0.094 Sum_probs=47.9
Q ss_pred CCCEEEEEcCC-----CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCC-----CcEEEEECCCCceE
Q 020021 217 DGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD-----GSVYAWSVRSGKEV 286 (332)
Q Consensus 217 dg~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~D-----g~i~vWd~~~~~~~ 286 (332)
++++++.|+.+ ..+.+||..+.+-...-.. +........+. .+++.++.|+.+ ..+.+||+.+.+..
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM-ATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCC-SSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCC-CcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 55666666543 4578888877654322111 11111111222 377888888765 46899999876543
Q ss_pred EEecCCCCCCceEEeCCCeeEEEeccc
Q 020021 287 ASWMSFDTEPPVIKWTPGSLMFVTGSS 313 (332)
Q Consensus 287 ~~~~~~~~~v~~l~~sp~~~~l~t~~~ 313 (332)
..-.........-+..-++++++.|+.
T Consensus 236 ~~~~~p~~r~~~~~~~~~~~i~v~GG~ 262 (301)
T 2vpj_A 236 TVTSMTTPRCYVGATVLRGRLYAIAGY 262 (301)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCB
T ss_pred ECCCCCCcccceeEEEECCEEEEEcCc
Confidence 321111111111122236677777763
No 306
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.29 E-value=0.97 Score=44.51 Aligned_cols=180 Identities=11% Similarity=-0.020 Sum_probs=91.9
Q ss_pred CCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCC----ceEEEeecccccEEEEEe
Q 020021 54 DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN----KYLRYFKGHHDRVVSLSL 129 (332)
Q Consensus 54 ~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~----~~~~~~~~h~~~V~~v~~ 129 (332)
....|+..++...+....+. ....+..+++.+....++++.. ..+.|+.+++... .....+........+|++
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~--~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEET--TTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeec--cceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 34567887877554433332 2334567788887777777653 2467777777642 222233323344556666
Q ss_pred cCCC-CeEEEeeCCCcEEEEeCCCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCC
Q 020021 130 CSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD 208 (332)
Q Consensus 130 ~~~~-~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~ 208 (332)
.+.+ ++.++-...+.|.+.++........+. .....
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-------------------------------------------~~l~~ 515 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------------------------------------------ENGSK 515 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-------------------------------------------CTTCC
T ss_pred eecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-------------------------------------------CCCCC
Confidence 6544 344444555566666554322111110 01122
Q ss_pred ceeEEEcCCCC-EEEEEcCC-CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEE-cCCCcEEEEECCC
Q 020021 209 ANVVKFSNDGR-LMLLTTME-GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVYAWSVRS 282 (332)
Q Consensus 209 v~~v~~s~dg~-~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sg-s~Dg~i~vWd~~~ 282 (332)
...|++.|.+. ++.+-..+ +.|...++..... ..+.. ..-.....++++|.+..|+-+ .....|...++..
T Consensus 516 P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~--~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 516 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEe--CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 45677777643 33333232 6777777653322 22211 112345568888766555555 4455788888743
No 307
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.11 E-value=0.77 Score=41.63 Aligned_cols=231 Identities=15% Similarity=0.222 Sum_probs=135.6
Q ss_pred ECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC-CceEEEeecc
Q 020021 42 FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLRYFKGH 120 (332)
Q Consensus 42 ~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~-~~~~~~~~~h 120 (332)
.+|..+.||-=. -+++.|+|+++...++.+..... |.--.|-... .+..-. +..|.-|++.. ..+.+.+..|
T Consensus 73 MnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~-VvfWkWis~~-~l~lVT----~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD-VTFWKWISLN-TVALVT----DNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp ECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC-CCEEEEEETT-EEEEEC----SSEEEEEESSSSCCCEEEEECC
T ss_pred eCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC-ceEEEecCCC-eEEEEc----CCeeEEecccCCCCchhheecc
Confidence 577777776655 68999999999988887765443 3333444333 333322 46799999975 4577777766
Q ss_pred cc----cEEEEEecCCCCeEEEee-------CCCcEEEEeCCCceEEEEEEecCceeEEEc-----CCCeEEEEEe----
Q 020021 121 HD----RVVSLSLCSSKDCFISGS-------LDRTVLLWDQRAEKCQGLLRVQGRPAAAYD-----DQGLVFAVAF---- 180 (332)
Q Consensus 121 ~~----~V~~v~~~~~~~~l~s~s-------~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---- 180 (332)
.. .|..-..+++.++++-.| -.|.+.++..+.+... .+..+......+. .+..+++-+.
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ-~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 224 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE-EECCSEEEEEEEECTTCSSEEEEEEEEECSTT
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccc-hheeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 53 577777788888665332 3467888887654322 2211111111111 1123444443
Q ss_pred CCEEEEEECccC--CCCCeeEEEe--cCCC---C-CceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCC
Q 020021 181 GGYIRMFDARKY--EKGPFDIFSV--GGDI---S-DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 252 (332)
Q Consensus 181 ~~~i~vwd~~~~--~~~~~~~~~~--~~~~---~-~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 252 (332)
++++++.++... ..+++..... .-.+ . =-.++.+|+.-..+..-+.-|.|+++|+.++.++...+. ...
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrI---s~~ 301 (494)
T 1bpo_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI---SGE 301 (494)
T ss_dssp CCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC---CSS
T ss_pred CcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecc---cCC
Confidence 378999998643 1223321111 1110 1 124577888888888899999999999999999876652 334
Q ss_pred cceEEEECCCCCEEEEEcCCCcEEEEECCCC
Q 020021 253 STLEASFSPEGMFVISGSGDGSVYAWSVRSG 283 (332)
Q Consensus 253 ~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~ 283 (332)
++...+...+..-++.....|.|.--.+...
T Consensus 302 ~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 302 TIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred ceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 4444444444444444445555555444443
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.08 E-value=0.15 Score=45.05 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=61.0
Q ss_pred CceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeE--EeeecCCCCCcceEEEECCC---CCEEEEE-cCC-----CcEE
Q 020021 208 DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS--TYNVKPVSRNSTLEASFSPE---GMFVISG-SGD-----GSVY 276 (332)
Q Consensus 208 ~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~~~~~~v~~spd---g~~l~sg-s~D-----g~i~ 276 (332)
....++|.|||+++++ ...|.|++++ .++... ..............++|+|| +.+|+.+ +.. ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 3467999999996665 4569999998 454321 11111111234568999998 4444444 332 6788
Q ss_pred EEECCCCc-----eE-EEecC---CCCCCceEEeCCCeeEEEecc
Q 020021 277 AWSVRSGK-----EV-ASWMS---FDTEPPVIKWTPGSLMFVTGS 312 (332)
Q Consensus 277 vWd~~~~~-----~~-~~~~~---~~~~v~~l~~sp~~~~l~t~~ 312 (332)
.++...++ .+ ..+.. .......|+|.|||.+.++.+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 88876432 11 11321 111346899999998888753
No 309
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.05 E-value=0.7 Score=40.66 Aligned_cols=231 Identities=11% Similarity=0.108 Sum_probs=116.3
Q ss_pred cEEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeeeEEee-------ecccceeEEEEccC---CCEEEEecCC-CC----
Q 020021 36 RISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTIN-------SKKYGVDLVCFTSH---PTTVIYSSKN-GW---- 99 (332)
Q Consensus 36 ~I~~i~~s~dg~-~l~tgs~D~tv~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~---~~~~~~~s~~-g~---- 99 (332)
....|+|.|+|+ +++ +...+.|++++.. +.....+. ........++++|+ ...++.+... +.
T Consensus 19 ~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 456899999998 665 4567899999854 33211111 12234567899885 4555544211 11
Q ss_pred CceeEEEEccCC--c--eEE-Eeec------ccccEEEEEecCCCCeEEEeeC-------------CCcEEEEeCCCce-
Q 020021 100 DESLRLLSLHDN--K--YLR-YFKG------HHDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAEK- 154 (332)
Q Consensus 100 d~~v~v~d~~~~--~--~~~-~~~~------h~~~V~~v~~~~~~~~l~s~s~-------------Dg~i~iWd~~~~~- 154 (332)
...|..+++..+ . ... .+.+ ....-..+.|.|||.+.++-+. .|.|.-.|....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 124555555432 1 111 1111 1122357999999976666543 2455555543210
Q ss_pred -----------EEEEEEecC--ceeEEEcC-CCeEEEEEeC----CEEEEEECc-cC-------C---------------
Q 020021 155 -----------CQGLLRVQG--RPAAAYDD-QGLVFAVAFG----GYIRMFDAR-KY-------E--------------- 193 (332)
Q Consensus 155 -----------~~~~~~~~~--~~~~~~~~-~~~~~~~~~~----~~i~vwd~~-~~-------~--------------- 193 (332)
....+.... .....+++ .+.++.+-.+ .+|.+...- ++ .
T Consensus 177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 011111111 12345666 5666655443 133221100 00 0
Q ss_pred CCCe--eEEEecCCCCCceeEEEc-------CCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCC
Q 020021 194 KGPF--DIFSVGGDISDANVVKFS-------NDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 264 (332)
Q Consensus 194 ~~~~--~~~~~~~~~~~v~~v~~s-------~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~ 264 (332)
...+ ..+....+ .....++|. .+|.++++.-..+.|..+++..++..............+..+++.|||.
T Consensus 257 ~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 257 VAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp CTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 0000 00111111 234456664 3578888888888999998876654433222111123567899999998
Q ss_pred EEEEE
Q 020021 265 FVISG 269 (332)
Q Consensus 265 ~l~sg 269 (332)
.+++.
T Consensus 336 lyv~t 340 (353)
T 2g8s_A 336 LYVLT 340 (353)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.75 E-value=0.23 Score=43.87 Aligned_cols=103 Identities=16% Similarity=0.275 Sum_probs=60.3
Q ss_pred CceeEEEcCCCCEEEEEcCCCeEEEEEccCCe-EeEEeeecCCCCCcceEEEECCC----CCEEEEEcC---C----CcE
Q 020021 208 DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT-LLSTYNVKPVSRNSTLEASFSPE----GMFVISGSG---D----GSV 275 (332)
Q Consensus 208 ~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~~v~~spd----g~~l~sgs~---D----g~i 275 (332)
....++|.|||+++++ ..+|.|+++| ..++ .+..+............++|+|+ +..+++-+. + ..|
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 4567899999996665 4559999997 4454 22111111111234568999998 444444332 3 567
Q ss_pred EEEECCCC-------ceE-EEecC-CCCCCceEEeCCCeeEEEecc
Q 020021 276 YAWSVRSG-------KEV-ASWMS-FDTEPPVIKWTPGSLMFVTGS 312 (332)
Q Consensus 276 ~vWd~~~~-------~~~-~~~~~-~~~~v~~l~~sp~~~~l~t~~ 312 (332)
..|+.... +.+ ..+.. .......|+|.|||.+.++.+
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 78877543 111 11221 111246799999999888743
No 311
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.66 E-value=1.2 Score=40.64 Aligned_cols=32 Identities=6% Similarity=0.134 Sum_probs=22.8
Q ss_pred ccEEEEEecCCCCeEEEeeCCCcEEEEeCCCc
Q 020021 122 DRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE 153 (332)
Q Consensus 122 ~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~ 153 (332)
..-++++|.|+|+.+++--..+.|++++..++
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g 58 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESG 58 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCC
Confidence 45678999999998877544456777765444
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.64 E-value=0.89 Score=38.67 Aligned_cols=80 Identities=13% Similarity=0.089 Sum_probs=39.7
Q ss_pred CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCC-----CcEEEEECCCCceEEEe-cCCCC-CCceEE
Q 020021 228 GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD-----GSVYAWSVRSGKEVASW-MSFDT-EPPVIK 300 (332)
Q Consensus 228 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~D-----g~i~vWd~~~~~~~~~~-~~~~~-~v~~l~ 300 (332)
..+.+||..+.+-...-. .+........+. -+++.++.|+.+ ..+.++|+.+.+....- ..... ....+.
T Consensus 169 ~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCP-MIEARKNHGLVF--VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp CCEEEEETTTTEEEEECC-CSSCCBSCEEEE--ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE
T ss_pred ceEEEeCCCCCeEEECCC-ccchhhcceEEE--ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE
Confidence 457788887765332211 111111111222 277788887754 36899999876543211 11111 112222
Q ss_pred eCCCeeEEEecc
Q 020021 301 WTPGSLMFVTGS 312 (332)
Q Consensus 301 ~sp~~~~l~t~~ 312 (332)
+ ++++++.|+
T Consensus 246 ~--~~~i~v~GG 255 (306)
T 3ii7_A 246 V--GSIVYVLAG 255 (306)
T ss_dssp E--TTEEEEEEC
T ss_pred E--CCEEEEEeC
Confidence 2 667777766
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.63 E-value=0.88 Score=38.56 Aligned_cols=66 Identities=8% Similarity=0.107 Sum_probs=37.4
Q ss_pred CCCEEEEEcCC-----CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCC-----cEEEEECCCCce
Q 020021 217 DGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG-----SVYAWSVRSGKE 285 (332)
Q Consensus 217 dg~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg-----~i~vWd~~~~~~ 285 (332)
++++++.|+.+ ..+.+||..+.+-...-.. +...... .+...+++.++.|+.++ .+.++|+.+.+.
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~--~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM-TTPRCYV--GATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC-SSCCBSC--EEEEETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC-CCcccce--eEEEECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 55666666553 4688899887654322111 1111111 12223778888887663 578888877553
No 314
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.46 E-value=0.77 Score=47.80 Aligned_cols=196 Identities=14% Similarity=0.220 Sum_probs=111.2
Q ss_pred ECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccC-CceEEEeecc
Q 020021 42 FHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLRYFKGH 120 (332)
Q Consensus 42 ~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~-~~~~~~~~~h 120 (332)
.+|..+.||-=+ -+++.|+|+++...++....... |.--.|-.... +.... +..|.-|++.. ..+.+.+..|
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~-VvfWkWis~~~-l~lVT----~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD-VTFWKWISLNT-VALVT----DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccccCCC-ceEEEecCCCe-eEEEc----CCeEEEeccCCCCccHHHHhcc
Confidence 467777776554 68999999998877766554332 33334443332 32222 45799999974 3455566555
Q ss_pred ----cccEEEEEecCCCCeEEEee-------CCCcEEEEeCCCceEEEEEEecCcee--EEE---cCCCeEEEEEe----
Q 020021 121 ----HDRVVSLSLCSSKDCFISGS-------LDRTVLLWDQRAEKCQGLLRVQGRPA--AAY---DDQGLVFAVAF---- 180 (332)
Q Consensus 121 ----~~~V~~v~~~~~~~~l~s~s-------~Dg~i~iWd~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~---- 180 (332)
...|..-..+++.++++-.| -.|.+.++..+.+... .+..+.... ... .++..+++-+.
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch-hhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 34566667778887665332 3577888876543321 111110000 000 12233444332
Q ss_pred CCEEEEEECccC--CCCCeeEEEec--CC----CCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEee
Q 020021 181 GGYIRMFDARKY--EKGPFDIFSVG--GD----ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (332)
Q Consensus 181 ~~~i~vwd~~~~--~~~~~~~~~~~--~~----~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (332)
++++++.++... ..+++...... -. ..=..++..|+.-..+..-+.-|-|+++|+.+|..+...+
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred CceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 378999988543 12222211100 00 0112456778877788888999999999999998875443
No 315
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.21 E-value=1.3 Score=38.48 Aligned_cols=142 Identities=10% Similarity=-0.007 Sum_probs=64.7
Q ss_pred CcEEEEeCCCceEEEEEEecC--c--eeEEEcCCCeEEEEEe------CCEEEEEECccCCCCCeeEEE-ecCCCCCcee
Q 020021 143 RTVLLWDQRAEKCQGLLRVQG--R--PAAAYDDQGLVFAVAF------GGYIRMFDARKYEKGPFDIFS-VGGDISDANV 211 (332)
Q Consensus 143 g~i~iWd~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~------~~~i~vwd~~~~~~~~~~~~~-~~~~~~~v~~ 211 (332)
..+.++|+.+++....-.++. . ..++...+..++.++. ...+..||+.... ....... ..........
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~-~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNN-LKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC----CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCC-CcEEecCCCCCCcccccc
Confidence 478899998877654433321 1 2223333333444332 2345666651110 0010000 0000011122
Q ss_pred EEEcCCCCEEEEEcCC----------------------CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEE
Q 020021 212 VKFSNDGRLMLLTTME----------------------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269 (332)
Q Consensus 212 v~~s~dg~~l~~~~~d----------------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sg 269 (332)
.+...++++++.|+.+ ..+.+||+.+.+-...-. .+..... ..+...+++.++.|
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~--~~~~~~~~~i~v~G 323 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE-LSQGRAY--GVSLPWNNSLLIIG 323 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE-CSSCCBS--SEEEEETTEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC-CCCCccc--ceeEEeCCEEEEEe
Confidence 2344577888888742 257788987654322211 1122111 22333578888888
Q ss_pred cCCC------cEEEEECCCCceEEE
Q 020021 270 SGDG------SVYAWSVRSGKEVAS 288 (332)
Q Consensus 270 s~Dg------~i~vWd~~~~~~~~~ 288 (332)
+.++ .|.+.++.+++.+..
T Consensus 324 G~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 324 GETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eeCCCCCEeeeEEEEEEcCcEeEee
Confidence 8653 455668887776543
No 316
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.21 E-value=1.2 Score=37.66 Aligned_cols=229 Identities=10% Similarity=0.137 Sum_probs=107.9
Q ss_pred CCEEEEEeCC----CcEEEEEcCCCeeeEE--eeecccceeEEEEccCCCEEEEecCCC--CCceeEEEEccCCceEEE-
Q 020021 46 SSYLVTASDD----ESIRLYDVTAATCLKT--INSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDNKYLRY- 116 (332)
Q Consensus 46 g~~l~tgs~D----~tv~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~s~~g--~d~~v~v~d~~~~~~~~~- 116 (332)
+.+++.||.+ ..+..||+.+.+-... +...... ..++. .++..++.+...+ .-+.+.++|..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCR-AGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCccccc-ceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 3455556543 4678888877643221 1111111 12222 2333344443211 124577888877653221
Q ss_pred -eecccccEEEEEecCCCCeEEEeeCCC-----cEEEEeCCCceEEEEEEecC---ceeEEEcCCCeEEEEEeC------
Q 020021 117 -FKGHHDRVVSLSLCSSKDCFISGSLDR-----TVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVAFG------ 181 (332)
Q Consensus 117 -~~~h~~~V~~v~~~~~~~~l~s~s~Dg-----~i~iWd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------ 181 (332)
+......-..+. .+++.++.|+.++ .+.++|+.+++....-.++. ...++...+..++.++.+
T Consensus 94 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 94 NMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEE
T ss_pred CCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCcc
Confidence 111111111111 2567777787664 57788888776543322221 112222233333433331
Q ss_pred -CEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCC-----CeEEEEEccCCeEeEEeeecCCCCCcce
Q 020021 182 -GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (332)
Q Consensus 182 -~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~ 255 (332)
..+.+||..... ...... .........+...++++++.|+.+ ..+.+||..+.+-...-.. +......
T Consensus 172 ~~~~~~yd~~~~~---W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~- 245 (302)
T 2xn4_A 172 LSTVECYNATTNE---WTYIAE-MSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADM-NMCRRNA- 245 (302)
T ss_dssp CCCEEEEETTTTE---EEEECC-CSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCC-SSCCBSC-
T ss_pred ccEEEEEeCCCCc---EEECCC-CccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCC-CCccccC-
Confidence 346777765421 111100 000111112223367888888764 3689999887654322111 1111111
Q ss_pred EEEECCCCCEEEEEcCCC-----cEEEEECCCCce
Q 020021 256 EASFSPEGMFVISGSGDG-----SVYAWSVRSGKE 285 (332)
Q Consensus 256 ~v~~spdg~~l~sgs~Dg-----~i~vWd~~~~~~ 285 (332)
. +...+++.++.|+.++ .+.+||+.+.+.
T Consensus 246 ~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 246 G-VCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp E-EEEETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred e-EEEECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 1 2223788888887664 489999987654
No 317
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.09 E-value=0.085 Score=43.23 Aligned_cols=104 Identities=13% Similarity=0.077 Sum_probs=63.9
Q ss_pred CceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEe----eecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEECCCC
Q 020021 208 DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY----NVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG 283 (332)
Q Consensus 208 ~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~ 283 (332)
.+..++|+|+|.+.++ .+|.++-.+..+++...-+ .+.....+-...+.|.|+|.+.++ .||.|+-++-.+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 5668999999998888 7888887776442111000 000011112357899999999988 5699998876442
Q ss_pred ceE---E--Eec-CC-CCCCceEEeCCCeeEEEeccceE
Q 020021 284 KEV---A--SWM-SF-DTEPPVIKWTPGSLMFVTGSSEL 315 (332)
Q Consensus 284 ~~~---~--~~~-~~-~~~v~~l~~sp~~~~l~t~~~d~ 315 (332)
..- . +.. .. =..+..|.|.|+|.+.+..+..+
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~dg~l 156 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVHGQQF 156 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEETTEE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEeCCcE
Confidence 210 0 000 00 02468899999998887774443
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.08 E-value=1.6 Score=38.31 Aligned_cols=38 Identities=13% Similarity=0.110 Sum_probs=28.4
Q ss_pred eecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCce
Q 020021 117 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154 (332)
Q Consensus 117 ~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~ 154 (332)
+......-+.++|.|+|+.+++--..|.|++++...++
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~ 64 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR 64 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCc
Confidence 33445567899999999988887668999988765443
No 319
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.01 E-value=1.6 Score=37.95 Aligned_cols=172 Identities=8% Similarity=0.082 Sum_probs=103.6
Q ss_pred EeccCCCcEEEEEECCCC-CEEEEEeCCCcEEEEEcCCCeeeEE-eee----c--ccceeEEEE---ccCCCEEEEecC-
Q 020021 29 SFRDYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKT-INS----K--KYGVDLVCF---TSHPTTVIYSSK- 96 (332)
Q Consensus 29 ~l~~h~~~I~~i~~s~dg-~~l~tgs~D~tv~iwd~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~~~~~s~- 96 (332)
.+++.+.--.+++|++.. .++++.-..++|..||...+..... +.. . ...+..+.+ .+.+..++++..
T Consensus 7 ~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~ 86 (334)
T 2p9w_A 7 DVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA 86 (334)
T ss_dssp EECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET
T ss_pred EecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccc
Confidence 355555556688998754 4555555899999999986644333 221 1 112456778 466544443221
Q ss_pred C-----C----CCceeEEEEcc---CCceEEEee--ccc-----------ccEEEEEecCCCCeEEEeeCC-CcEEEEeC
Q 020021 97 N-----G----WDESLRLLSLH---DNKYLRYFK--GHH-----------DRVVSLSLCSSKDCFISGSLD-RTVLLWDQ 150 (332)
Q Consensus 97 ~-----g----~d~~v~v~d~~---~~~~~~~~~--~h~-----------~~V~~v~~~~~~~~l~s~s~D-g~i~iWd~ 150 (332)
. | -+..+..+|+. +++.+.... ... .....++..++|+.-++++.- +.|...+.
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 0 1 14668889998 666554332 222 247788888999988887765 55444443
Q ss_pred CCceEEEEEEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeE
Q 020021 151 RAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHI 230 (332)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i 230 (332)
... .+..|.+..... ......+.+++.|||..|++....|.+
T Consensus 167 dG~-----------------------------~~~~~~~~~~~~---------~~~~G~nGIv~~pdg~~Liv~~~~g~L 208 (334)
T 2p9w_A 167 DGK-----------------------------TVSTFAWESGNG---------GQRPGYSGITFDPHSNKLIAFGGPRAL 208 (334)
T ss_dssp TSC-----------------------------CEEEEEECCCCS---------SSCCSCSEEEEETTTTEEEEESSSSSE
T ss_pred CCC-----------------------------EEeeeeecCCCc---------ccccCcceEEEeCCCCEEEEEcCCCeE
Confidence 211 122333221110 111245789999999988888779999
Q ss_pred EEEEccCC
Q 020021 231 HVLDSFRG 238 (332)
Q Consensus 231 ~i~d~~~~ 238 (332)
..+|+.+.
T Consensus 209 ~~fD~~~p 216 (334)
T 2p9w_A 209 TAFDVSKP 216 (334)
T ss_dssp EEEECSSS
T ss_pred EEEcCCCC
Confidence 99998753
No 320
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.52 E-value=3.4 Score=39.42 Aligned_cols=270 Identities=6% Similarity=0.051 Sum_probs=143.4
Q ss_pred CcEEEEEECCCCCEEEEEeC--CCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCc
Q 020021 35 GRISSMDFHKSSSYLVTASD--DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 112 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~--D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~ 112 (332)
....+|+++|...+|.-..+ ...|...+.+.. ....+...-.....+++.+.+..++++-. ..+.|...|+....
T Consensus 123 ~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~-~~~~l~~~~~~P~GlalD~~~~~LY~aD~--~~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 123 DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS-ERTTLVPNVGRANGLTIDYAKRRLYWTDL--DTNLIESSNMLGLN 199 (628)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSCSSEEEEEEETTTTEEEEEET--TTTEEEEEETTSCS
T ss_pred CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC-ceEEEECCCCCcceEEEccccCEEEEEEC--CCCEEEEEcCCCCc
Confidence 44679999986555544443 345555565533 33333333345677899998888888753 35788888986644
Q ss_pred eEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEec----------------C-ce----------
Q 020021 113 YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ----------------G-RP---------- 165 (332)
Q Consensus 113 ~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~----------------~-~~---------- 165 (332)
. ..+........++++.. +..++|-...+.|...|..+++....+... . .+
T Consensus 200 ~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~ 277 (628)
T 4a0p_A 200 R-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSH 277 (628)
T ss_dssp C-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSS
T ss_pred e-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcch
Confidence 3 34444444556777764 445555555677777775544322222110 0 00
Q ss_pred eEEEcCCC-----------------------eEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCC-CEE
Q 020021 166 AAAYDDQG-----------------------LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLM 221 (332)
Q Consensus 166 ~~~~~~~~-----------------------~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l 221 (332)
.+...+.+ .++..+....|+-..+....... ..... .....+.+++|.+.. +++
T Consensus 278 ~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~-~~l~~-~~~~~~~~ld~d~~~~~iy 355 (628)
T 4a0p_A 278 LCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPD-IILPI-HSLRNVRAIDYDPLDKQLY 355 (628)
T ss_dssp EEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCCC-EECCC-TTCSCEEEEEEETTTTEEE
T ss_pred hhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccCce-EEEEe-hhcCCceEEEEecCCCeEE
Confidence 00000101 11122223334333332111000 01111 112346678888754 444
Q ss_pred EEEcCCCeEEEEEccCCeEeEEeeecC---CCCCcceEEEECCCCCEE-EEEcCCCcEEEEECCCCceEEEec-CCCCCC
Q 020021 222 LLTTMEGHIHVLDSFRGTLLSTYNVKP---VSRNSTLEASFSPEGMFV-ISGSGDGSVYAWSVRSGKEVASWM-SFDTEP 296 (332)
Q Consensus 222 ~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~~~~~~v~~spdg~~l-~sgs~Dg~i~vWd~~~~~~~~~~~-~~~~~v 296 (332)
.+-...+.|+.++.........+.... ........+|+.+.++.| .+-+..+.|.+.++. ++....+. ..-..+
T Consensus 356 ~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~P 434 (628)
T 4a0p_A 356 WIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRP 434 (628)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCE
T ss_pred EEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCce
Confidence 444567888888865432221221100 012345678998876644 466778899999984 55544442 223457
Q ss_pred ceEEeCC-CeeEEEecc
Q 020021 297 PVIKWTP-GSLMFVTGS 312 (332)
Q Consensus 297 ~~l~~sp-~~~~l~t~~ 312 (332)
..|++.| .|.++.|..
T Consensus 435 r~iavdp~~g~ly~tD~ 451 (628)
T 4a0p_A 435 RAVVVNPEKGYMYFTNL 451 (628)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred eeEEEecCCCeEEEeec
Confidence 8899999 788887753
No 321
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.38 E-value=2.8 Score=37.83 Aligned_cols=113 Identities=14% Similarity=0.196 Sum_probs=73.1
Q ss_pred eEEEcCCCeEEEEEeCCEEEEEECccCCCC--------Cee--EEEecC----CCCCceeEEEcCCC---CEEEEEcCCC
Q 020021 166 AAAYDDQGLVFAVAFGGYIRMFDARKYEKG--------PFD--IFSVGG----DISDANVVKFSNDG---RLMLLTTMEG 228 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~--------~~~--~~~~~~----~~~~v~~v~~s~dg---~~l~~~~~dg 228 (332)
....++.|.+++...+..|.+..+...... ++. .+.++. ...+|..+.|+|-| ..+++=..|+
T Consensus 70 qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~ 149 (452)
T 3pbp_A 70 HVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDD 149 (452)
T ss_dssp EEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTS
T ss_pred EEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCC
Confidence 467788899999998899999887622111 111 334332 13568889998865 6899999999
Q ss_pred eEEEEEccCCeE-eEEeeec------CCCCCcceEEEECCCCCEEEEEc--CCCcEEEE
Q 020021 229 HIHVLDSFRGTL-LSTYNVK------PVSRNSTLEASFSPEGMFVISGS--GDGSVYAW 278 (332)
Q Consensus 229 ~i~i~d~~~~~~-~~~~~~~------~~~~~~~~~v~~spdg~~l~sgs--~Dg~i~vW 278 (332)
.|++||+..... ...++.. ......+.+++|++++-.|...+ ..|-|+-.
T Consensus 150 ~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 150 TITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 999999975321 0122110 11124566789999887666644 77777654
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.35 E-value=0.83 Score=41.80 Aligned_cols=105 Identities=16% Similarity=0.280 Sum_probs=60.2
Q ss_pred CceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCC-----CCCcceEEEECCC----CCEEEEEcC-------
Q 020021 208 DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV-----SRNSTLEASFSPE----GMFVISGSG------- 271 (332)
Q Consensus 208 ~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~~~~~~~v~~spd----g~~l~sgs~------- 271 (332)
....++|.|||+++++-...+.|++++...+........... .......++|+|| +.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 456899999999888766556899998655543221111111 1234457999995 444444432
Q ss_pred -----CCcEEEEECCCC-------ceEE-EecC-CCCCCceEEeCCCeeEEEecc
Q 020021 272 -----DGSVYAWSVRSG-------KEVA-SWMS-FDTEPPVIKWTPGSLMFVTGS 312 (332)
Q Consensus 272 -----Dg~i~vWd~~~~-------~~~~-~~~~-~~~~v~~l~~sp~~~~l~t~~ 312 (332)
...|.-+++... +.+. .+.. .......|+|.|||.+.++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665332 1111 1221 112347799999998877743
No 323
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.27 E-value=2.2 Score=36.11 Aligned_cols=183 Identities=13% Similarity=0.153 Sum_probs=90.8
Q ss_pred CCCeEEEeeCCC-----cEEEEeCCCceEEEEEEecC---ceeEEEcCCCeEEEEEeC-----CEEEEEECccCCCCCee
Q 020021 132 SKDCFISGSLDR-----TVLLWDQRAEKCQGLLRVQG---RPAAAYDDQGLVFAVAFG-----GYIRMFDARKYEKGPFD 198 (332)
Q Consensus 132 ~~~~l~s~s~Dg-----~i~iWd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-----~~i~vwd~~~~~~~~~~ 198 (332)
+++.++.|+.++ .+.++|+.+++....-.++. ...++...+..++.++.+ ..+.+||..... ..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~---W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNE---WF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTE---EE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCe---Ee
Confidence 567778887653 58888988776544322221 112222333445555544 256677765421 11
Q ss_pred EEEecCCCCCceeEEEcCCCCEEEEEcCC-------CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcC
Q 020021 199 IFSVGGDISDANVVKFSNDGRLMLLTTME-------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSG 271 (332)
Q Consensus 199 ~~~~~~~~~~v~~v~~s~dg~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~ 271 (332)
...... .......+...++++++.|+.+ ..+.+||..+.+-...-.. +........+. .+++.++.|+.
T Consensus 138 ~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~--~~~~iyv~GG~ 213 (302)
T 2xn4_A 138 HVAPMN-TRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEM-STRRSGAGVGV--LNNLLYAVGGH 213 (302)
T ss_dssp EECCCS-SCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCC-SSCCBSCEEEE--ETTEEEEECCB
T ss_pred ecCCCC-CcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCC-ccccccccEEE--ECCEEEEECCC
Confidence 111000 0111111222377888887643 3588999887654322111 11111111222 37788888876
Q ss_pred CC-----cEEEEECCCCceEEEe-cCCCCCCceEEeCCCeeEEEeccc-------eEEEecccc
Q 020021 272 DG-----SVYAWSVRSGKEVASW-MSFDTEPPVIKWTPGSLMFVTGSS-------ELSFWIPDL 322 (332)
Q Consensus 272 Dg-----~i~vWd~~~~~~~~~~-~~~~~~v~~l~~sp~~~~l~t~~~-------d~~~w~~~~ 322 (332)
++ .+.++|+.+.+..... ......-..++ ..++++++.|+. ++..++++.
T Consensus 214 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-AVNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp SSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-EECCEEEEECCcCCCcccccEEEEcCCC
Confidence 53 6999999876543221 11111111222 236677777663 255555543
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.87 E-value=2.7 Score=35.73 Aligned_cols=102 Identities=14% Similarity=0.090 Sum_probs=52.1
Q ss_pred CCCEEEEEcCC-----CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCC-----CcEEEEECCCCceE
Q 020021 217 DGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD-----GSVYAWSVRSGKEV 286 (332)
Q Consensus 217 dg~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~D-----g~i~vWd~~~~~~~ 286 (332)
++++++.|+.+ ..+.+||..+.+-...-. .+........+.+ +++.++.|+.+ ..+.++|+.+.+..
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA-MNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC-CCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 56666666543 457888887765332111 1111111112233 77888888765 46999999876543
Q ss_pred EEe-cCCCCCCceEEeCCCeeEEEeccc-------eEEEecccc
Q 020021 287 ASW-MSFDTEPPVIKWTPGSLMFVTGSS-------ELSFWIPDL 322 (332)
Q Consensus 287 ~~~-~~~~~~v~~l~~sp~~~~l~t~~~-------d~~~w~~~~ 322 (332)
... ......-..++. -++++++.|+. ++.++++..
T Consensus 245 ~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 245 FVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp ECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred ECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 221 111111112222 35677777653 355555543
No 325
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.80 E-value=5.1 Score=38.70 Aligned_cols=111 Identities=9% Similarity=0.098 Sum_probs=55.7
Q ss_pred CCCCEEEEEeCC----CcEEEEEcCCCeeeEEe-e-------ecccceeEEEEcc-CCCEEEEecCCC---CCceeEEEE
Q 020021 44 KSSSYLVTASDD----ESIRLYDVTAATCLKTI-N-------SKKYGVDLVCFTS-HPTTVIYSSKNG---WDESLRLLS 107 (332)
Q Consensus 44 ~dg~~l~tgs~D----~tv~iwd~~~~~~~~~~-~-------~~~~~v~~~~~~~-~~~~~~~~s~~g---~d~~v~v~d 107 (332)
.++.+++.||.+ ..+.+||..+++-...- . .... -+.++... ++...+.+...+ .-+.+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~-~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARM-CHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCB-SCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCcccc-ceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 456788888864 46888888776433221 1 1111 12233332 444445443222 124577888
Q ss_pred ccCCceEEEeecccccE-EEEEecCCCCeEEEeeCCC--cEEEEeCCCceE
Q 020021 108 LHDNKYLRYFKGHHDRV-VSLSLCSSKDCFISGSLDR--TVLLWDQRAEKC 155 (332)
Q Consensus 108 ~~~~~~~~~~~~h~~~V-~~v~~~~~~~~l~s~s~Dg--~i~iWd~~~~~~ 155 (332)
..+++-...-.-....- .++....+++.++.||.++ .+.+||+.++..
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 87754322110000000 1122223677888887655 577777776543
No 326
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.72 E-value=2.9 Score=35.62 Aligned_cols=67 Identities=10% Similarity=0.057 Sum_probs=37.4
Q ss_pred CCCCEEEEEcC------CCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCC-----cEEEEECCCCc
Q 020021 216 NDGRLMLLTTM------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG-----SVYAWSVRSGK 284 (332)
Q Consensus 216 ~dg~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg-----~i~vWd~~~~~ 284 (332)
.++++++.|+. -..+.+||..+.+-...-. .+........+. -+++.++.|+.++ .+.++|+.+.+
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAP-MQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCC-CCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 35566666654 2368888887764332111 111111111222 3778888887655 58899998765
Q ss_pred e
Q 020021 285 E 285 (332)
Q Consensus 285 ~ 285 (332)
.
T Consensus 224 W 224 (315)
T 4asc_A 224 W 224 (315)
T ss_dssp E
T ss_pred E
Confidence 4
No 327
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.61 E-value=0.74 Score=40.51 Aligned_cols=103 Identities=11% Similarity=0.094 Sum_probs=57.5
Q ss_pred CceeEEEcCCCC-EEEEEcCCCeEEEEEccCCeEeEEeeec----CCCCCcceEEEECCC----CCEEEEEcC-------
Q 020021 208 DANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTLLSTYNVK----PVSRNSTLEASFSPE----GMFVISGSG------- 271 (332)
Q Consensus 208 ~v~~v~~s~dg~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~~~~~~v~~spd----g~~l~sgs~------- 271 (332)
....++|.|||+ ++++ ...|.|++++.. +.....+... .........++|+|| +...++-+.
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 346789999999 6654 457999999853 4332111100 011223467999996 444444332
Q ss_pred CCcEEEEECCCC--c--eEEE----ecC---CCCCCceEEeCCCeeEEEecc
Q 020021 272 DGSVYAWSVRSG--K--EVAS----WMS---FDTEPPVIKWTPGSLMFVTGS 312 (332)
Q Consensus 272 Dg~i~vWd~~~~--~--~~~~----~~~---~~~~v~~l~~sp~~~~l~t~~ 312 (332)
...|..|++... + .... +.. .......|+|.|||.+.++.+
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 235666766532 1 1111 111 011246799999998877743
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.63 E-value=4.2 Score=34.46 Aligned_cols=66 Identities=14% Similarity=0.063 Sum_probs=37.0
Q ss_pred CCCEEEEEcCC-----CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCC-----cEEEEECCCCce
Q 020021 217 DGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG-----SVYAWSVRSGKE 285 (332)
Q Consensus 217 dg~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg-----~i~vWd~~~~~~ 285 (332)
++++++.|+.+ ..+.+||+.+.+-...-. .+........+. -+++.++.|+.++ .+.++|+.+.+.
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP-MKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCC-CCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 56666666554 468889987765432111 111111111222 3778888887543 578888877654
No 329
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.33 E-value=6.6 Score=33.93 Aligned_cols=110 Identities=8% Similarity=-0.027 Sum_probs=51.8
Q ss_pred CCCCEEEEEcC------CCeEEEEEc--cCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCC---------------
Q 020021 216 NDGRLMLLTTM------EGHIHVLDS--FRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD--------------- 272 (332)
Q Consensus 216 ~dg~~l~~~~~------dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~D--------------- 272 (332)
.++++++.|+. ...+.++|+ .+.+-.. ....+.........+...+++.++.|+.+
T Consensus 199 ~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~ 277 (357)
T 2uvk_A 199 KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK-LAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYA 277 (357)
T ss_dssp ETTEEEEECCEEETTEECCCEEEEECC---CEEEE-CCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSST
T ss_pred ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEe-cCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceec
Confidence 36777777764 345777776 4433221 11111111111112333477888888742
Q ss_pred -------CcEEEEECCCCceE--EEecCCCCCCceEEeCCCeeEEEeccc--------eEEEecccccccccc
Q 020021 273 -------GSVYAWSVRSGKEV--ASWMSFDTEPPVIKWTPGSLMFVTGSS--------ELSFWIPDLSKLGAY 328 (332)
Q Consensus 273 -------g~i~vWd~~~~~~~--~~~~~~~~~v~~l~~sp~~~~l~t~~~--------d~~~w~~~~~~~~~~ 328 (332)
..+.++|+.+.+.. ..+. .. ...+.+...++++++.|+. |+.+.+++..++-+.
T Consensus 278 ~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 278 HEGLKKSYSTDIHLWHNGKWDKSGELS-QG-RAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp TTTCCCEECCEEEECC---CEEEEECS-SC-CBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred cccccceeeEEEEecCCCceeeCCCCC-CC-cccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 25789999875542 2221 11 1122233346777777763 244446666665544
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.91 E-value=1.3 Score=38.79 Aligned_cols=183 Identities=9% Similarity=0.099 Sum_probs=91.1
Q ss_pred CceeEEEEccCCceEEEeecc-cccEEEEEec--C-CCCeEEEe-eCCCcEEEEeCCCceEEEEEEecCc----eeEE--
Q 020021 100 DESLRLLSLHDNKYLRYFKGH-HDRVVSLSLC--S-SKDCFISG-SLDRTVLLWDQRAEKCQGLLRVQGR----PAAA-- 168 (332)
Q Consensus 100 d~~v~v~d~~~~~~~~~~~~h-~~~V~~v~~~--~-~~~~l~s~-s~Dg~i~iWd~~~~~~~~~~~~~~~----~~~~-- 168 (332)
|+.+.-.|.++|+.+..++.- ..++....-. + ++..++-. ..||.+..+|..++...-.+..+.. +...
T Consensus 19 dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~ 98 (339)
T 2be1_A 19 EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKT 98 (339)
T ss_dssp TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEEC
T ss_pred CCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCC
Confidence 778888899899888877654 1222222111 1 22333333 6899999999888754433332211 1110
Q ss_pred ---E------cCCCeEEEEEeCCEEEEEECccCCCCCeeEEEecCCCCC-----ceeEE---Ec--CCCCEEEEEcCCCe
Q 020021 169 ---Y------DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD-----ANVVK---FS--NDGRLMLLTTMEGH 229 (332)
Q Consensus 169 ---~------~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~~~~~~~~~-----v~~v~---~s--~dg~~l~~~~~dg~ 229 (332)
. ..++.+++++.++.+...|.++.+. +-.+..+..... ..+-. +. ..+..+..+..+..
T Consensus 99 ~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~--~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~ 176 (339)
T 2be1_A 99 NIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI--ISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFE 176 (339)
T ss_dssp C----------CCEEEEECEEEEEEEEEETTTCCE--EEEESTTCBCC--------------------CCEEEEEEEEEE
T ss_pred CceeecccccccCCEEEEEecCCEEEEEECCCCcE--EEEEecCCCcccccccccccccccccccccCCCeEEEecceEE
Confidence 1 1466778888889998888876432 111111111000 00000 10 11345566666666
Q ss_pred EEEEEccCCeEeEEeee---cCCCCC-cce-EEEECCCCCEEEEEcCCCcEEEEECCCCceEE
Q 020021 230 IHVLDSFRGTLLSTYNV---KPVSRN-STL-EASFSPEGMFVISGSGDGSVYAWSVRSGKEVA 287 (332)
Q Consensus 230 i~i~d~~~~~~~~~~~~---~~~~~~-~~~-~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~ 287 (332)
+.+.+ .+|+ +=.+.. .+.... .+. .-.++.|+.+++ ++.||.|.-.|..+|+.+.
T Consensus 177 v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~-~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 177 LGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIA-PFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp CEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEE-EETTTEEEEECSTTCCEEE
T ss_pred EEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEE-ECCCCEEEEEECCCCcEEE
Confidence 66655 3443 100000 000000 000 001124577754 6789999999988887665
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.76 E-value=8.2 Score=32.45 Aligned_cols=66 Identities=8% Similarity=0.078 Sum_probs=37.4
Q ss_pred CCCEEEEEcCC-----CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCC-----CcEEEEECCCCce
Q 020021 217 DGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD-----GSVYAWSVRSGKE 285 (332)
Q Consensus 217 dg~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~D-----g~i~vWd~~~~~~ 285 (332)
++++++.|+.+ ..+.+||+.+.+-...-. .+........+.+ +++.++.|+.+ ..+.++|+.+.+.
T Consensus 200 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 200 KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP-MPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp TTEEEEECCEETTEEBCCEEEEETTTTEEEECCC-CSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCC-CCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 55666666543 357888887765332111 1111112222233 78888888854 4688999987654
No 332
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.57 E-value=9.9 Score=33.12 Aligned_cols=112 Identities=7% Similarity=0.030 Sum_probs=69.0
Q ss_pred CEEEEEeCCCcEEEEEcCCCeeeEEeeecc-cceeEEEEc-c---CCCEEEEecCCCCCceeEEEEccCCceEEEeec--
Q 020021 47 SYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFT-S---HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG-- 119 (332)
Q Consensus 47 ~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~-~~v~~~~~~-~---~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~-- 119 (332)
.+++.++.||.|.-.|..+|+.+-++.... .+. +... + .+..++.... ..|+.+..++.++|.....+.-
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~--~~~~~~~~~~~~~~~vv~p-~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPL--IEIQEPSRLETYETLIIEP-FGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCS--EECCCSCTTTSSEEEEECC-STTTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCc--EEecCCccccCCcEEEEEE-CCCCEEEEEECCCCcEEeeecccc
Confidence 578889999999999999999988776541 111 1111 1 1223333310 1378888889888754433221
Q ss_pred --ccccEEEE---Ee-----cCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe
Q 020021 120 --HHDRVVSL---SL-----CSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV 161 (332)
Q Consensus 120 --h~~~V~~v---~~-----~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~ 161 (332)
...++..- .+ ...+..+++|+.+|.+..-|+++++.+..+..
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 11122210 00 01456889999999999999999988777654
No 333
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.12 E-value=4.9 Score=36.75 Aligned_cols=102 Identities=15% Similarity=0.217 Sum_probs=56.4
Q ss_pred ceeEEEcCCCC-EEEEEcCCCeEEEEEccCCe---EeEEee--ecC----CCCCcceEEEECCC----CCEEEEEcCCC-
Q 020021 209 ANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGT---LLSTYN--VKP----VSRNSTLEASFSPE----GMFVISGSGDG- 273 (332)
Q Consensus 209 v~~v~~s~dg~-~l~~~~~dg~i~i~d~~~~~---~~~~~~--~~~----~~~~~~~~v~~spd----g~~l~sgs~Dg- 273 (332)
...++|.|||+ .++++...|.|++++..... .+..+. ... ....-...++|+|+ +.+.++-+.+.
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 46789999996 34455678999999753221 111111 000 01234567999996 55555444221
Q ss_pred -----------cEEEEECCCC----------ceEEEec----CCCCCCceEEeCCCeeEEEecc
Q 020021 274 -----------SVYAWSVRSG----------KEVASWM----SFDTEPPVIKWTPGSLMFVTGS 312 (332)
Q Consensus 274 -----------~i~vWd~~~~----------~~~~~~~----~~~~~v~~l~~sp~~~~l~t~~ 312 (332)
.|.-|.+..+ +.+..+. .|. ...|+|.|||.+.++.+
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGPDGFLYIILG 157 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECTTSCEEEEEC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECCCCcEEEEeC
Confidence 3444665421 2222221 233 36799999998877754
No 334
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=87.96 E-value=9.8 Score=31.07 Aligned_cols=174 Identities=9% Similarity=0.029 Sum_probs=86.0
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCe------eeEEeee-cccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEe
Q 020021 45 SSSYLVTASDDESIRLYDVTAAT------CLKTINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 117 (332)
Q Consensus 45 dg~~l~tgs~D~tv~iwd~~~~~------~~~~~~~-~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~ 117 (332)
...+|+....| +++.=....+. ...++.. .=..+..++|+|++...+. . ++.+.-.+..+.+....+
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~---~G~Ly~~~~~t~~~~~W~ 76 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--L---NDKIYKGTPPTHDNDNWM 76 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--E---TTEEEEESCCCSTTCCHH
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--e---CCeEEEECCCCCCccccc
Confidence 44577777777 54432222211 1112211 0135678999997763333 2 344444444332221111
Q ss_pred ecccccE--------EEEEecCCCCeEEEeeCCCcEEEEeCCCceEEE------EEEe---cCceeEEEcCCCeEEEEEe
Q 020021 118 KGHHDRV--------VSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQG------LLRV---QGRPAAAYDDQGLVFAVAF 180 (332)
Q Consensus 118 ~~h~~~V--------~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~ 180 (332)
. -...| ..+.|.++|.+-++ .||.|.-|+..++.... .+-- .......+.+++.+.++.
T Consensus 77 ~-s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~- 152 (236)
T 1tl2_A 77 G-RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH- 152 (236)
T ss_dssp H-HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-
T ss_pred c-cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-
Confidence 1 12233 67888899976666 67999888753322111 1100 123456778899999988
Q ss_pred CCEEEEEECccCCCCC----eeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEE
Q 020021 181 GGYIRMFDARKYEKGP----FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIH 231 (332)
Q Consensus 181 ~~~i~vwd~~~~~~~~----~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~ 231 (332)
++.+.-.-........ ..... ...-.....+.|+++|.+.++. ++.++
T Consensus 153 dg~lyr~~~P~~~~~~wl~~~~~~g-~~g~~~yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 153 GQQFYKALPPVSNQDNWLARATKIG-QGGWDTFKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp TTEEEEECCCSSTTCCHHHHCEEEE-SSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCcEEecCCCCCCCcccccccceec-cCCcceEEEEEECCCCcEEEEe--CCeEE
Confidence 8875322111000000 00111 0111123445688888877766 66544
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=86.24 E-value=16 Score=31.83 Aligned_cols=240 Identities=10% Similarity=0.074 Sum_probs=116.7
Q ss_pred EeccCCCcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeE--Ee----eecccceeEEEEccC---CCEEEEecCCCC
Q 020021 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK--TI----NSKKYGVDLVCFTSH---PTTVIYSSKNGW 99 (332)
Q Consensus 29 ~l~~h~~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~--~~----~~~~~~v~~~~~~~~---~~~~~~~s~~g~ 99 (332)
.+...=..-..|+|.|||.++++--..+.|++++..+++... .+ .........++++|+ ...++..-+...
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 343333456799999999988877668999999876655421 11 122345678899885 334443211112
Q ss_pred CceeEEEEccCC----------ceEE-Eee-cccccEEEEEecCCCCeEEEeeC-------------CCcEEEEeCCCce
Q 020021 100 DESLRLLSLHDN----------KYLR-YFK-GHHDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAEK 154 (332)
Q Consensus 100 d~~v~v~d~~~~----------~~~~-~~~-~h~~~V~~v~~~~~~~~l~s~s~-------------Dg~i~iWd~~~~~ 154 (332)
++.|.-+.+..+ +.+. .+. +..+.-..+.|.|||.+.++.+. -|.|.-.+....-
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 344555555431 1111 121 11223467999999998887652 2344333432210
Q ss_pred -------EEEEEEecC--ceeEEEcCCCeEEEEEeC--C--EEEEEECc-cC-------C--CCCe--eEEEecCCCCCc
Q 020021 155 -------CQGLLRVQG--RPAAAYDDQGLVFAVAFG--G--YIRMFDAR-KY-------E--KGPF--DIFSVGGDISDA 209 (332)
Q Consensus 155 -------~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~--~i~vwd~~-~~-------~--~~~~--~~~~~~~~~~~v 209 (332)
....+.... .....+++.+.++++-.+ + +|....-- ++ . ...+ ..+....+....
T Consensus 186 p~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap 265 (347)
T 3das_A 186 APGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASP 265 (347)
T ss_dssp CTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCE
T ss_pred cCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCC
Confidence 001111111 123566666666654432 1 23322110 00 0 0000 011111111123
Q ss_pred eeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEE-eeecCCCCCcceEEEECCCCCEEEEE
Q 020021 210 NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLST-YNVKPVSRNSTLEASFSPEGMFVISG 269 (332)
Q Consensus 210 ~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~~~~~~v~~spdg~~l~sg 269 (332)
..++|- +|.++...-..+.|..+.+..+..... -.........+..|+..|||..+++-
T Consensus 266 ~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 266 SGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp EEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred cceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence 455665 567777666666777766654432110 00111123456778888888766654
No 336
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=85.34 E-value=16 Score=30.85 Aligned_cols=67 Identities=16% Similarity=0.151 Sum_probs=36.6
Q ss_pred CCCEEEEEcCCC-----eEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCC--------------cEEE
Q 020021 217 DGRLMLLTTMEG-----HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG--------------SVYA 277 (332)
Q Consensus 217 dg~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg--------------~i~v 277 (332)
++++++.|+.++ .+.+||+.+.+-...-. .+........+. .+++.++.|+.++ .+.+
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~ 272 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA-FPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWR 272 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC-CSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCC-CCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEE
Confidence 566666666543 57888887765332211 111111111222 3677777777642 4778
Q ss_pred EECCCCceE
Q 020021 278 WSVRSGKEV 286 (332)
Q Consensus 278 Wd~~~~~~~ 286 (332)
+|+.+.+..
T Consensus 273 yd~~~~~W~ 281 (315)
T 4asc_A 273 YNEEEKKWE 281 (315)
T ss_dssp EETTTTEEE
T ss_pred ecCCCChhh
Confidence 898776543
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=84.95 E-value=17 Score=30.76 Aligned_cols=229 Identities=10% Similarity=0.088 Sum_probs=105.1
Q ss_pred EEEEEeCCCcEEEEEcCCCeeeEE-eeecccceeEEEEccCCCEEEEecCC----C----CCceeEEEEccCCceEEE--
Q 020021 48 YLVTASDDESIRLYDVTAATCLKT-INSKKYGVDLVCFTSHPTTVIYSSKN----G----WDESLRLLSLHDNKYLRY-- 116 (332)
Q Consensus 48 ~l~tgs~D~tv~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~s~~----g----~d~~v~v~d~~~~~~~~~-- 116 (332)
+++.|+. .+..||..+++-... +..........+...++...+.+... + ....+.++|..+++-...
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 4444553 378899987764431 11101111222233444444554310 1 111266778776653221
Q ss_pred eecccccEEEEEecCCCCeEEEeeCC-------CcEEEEeCCCceEEEEEEecCc---eeEEEcCCCeEEEEEe-C----
Q 020021 117 FKGHHDRVVSLSLCSSKDCFISGSLD-------RTVLLWDQRAEKCQGLLRVQGR---PAAAYDDQGLVFAVAF-G---- 181 (332)
Q Consensus 117 ~~~h~~~V~~v~~~~~~~~l~s~s~D-------g~i~iWd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~---- 181 (332)
+......-..+. -+++.++.|+.+ ..+.++|+.+++....-.++.. ..++...+..++.++. +
T Consensus 96 ~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 96 LPSARCLFGLGE--VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKC 173 (318)
T ss_dssp BSSCBCSCEEEE--ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCB
T ss_pred CCccccccceEE--ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCc
Confidence 111011111111 256777778765 2477888887765433222211 1222223333444443 1
Q ss_pred -CEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCC-----CeEEEEEccCCeEeEEeeecCCCCCcce
Q 020021 182 -GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (332)
Q Consensus 182 -~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~ 255 (332)
+.+.+||..... ...... .........+..-++++++.|+.+ ..+.+||+.+.+-...-. .+......
T Consensus 174 ~~~~~~yd~~~~~---W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~- 247 (318)
T 2woz_A 174 TNRVFIYNPKKGD---WKDLAP-MKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTE-FPQERSSI- 247 (318)
T ss_dssp CCCEEEEETTTTE---EEEECC-CSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCC-CSSCCBSC-
T ss_pred cceEEEEcCCCCE---EEECCC-CCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCC-CCCcccce-
Confidence 357778875421 111110 001111111222367888887654 357788987765332111 11111111
Q ss_pred EEEECCCCCEEEEEcCC--------------CcEEEEECCCCceEE
Q 020021 256 EASFSPEGMFVISGSGD--------------GSVYAWSVRSGKEVA 287 (332)
Q Consensus 256 ~v~~spdg~~l~sgs~D--------------g~i~vWd~~~~~~~~ 287 (332)
.+...+++.++.|+.+ ..+.++|+.+.+...
T Consensus 248 -~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 248 -SLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp -EEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred -EEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 1222467888887754 357888887765533
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=83.99 E-value=42 Score=34.56 Aligned_cols=249 Identities=12% Similarity=0.105 Sum_probs=126.7
Q ss_pred CcEEEEEcCCCeeeEEeeecc-cceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEe-ecccccEEEEEecCC-
Q 020021 56 ESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF-KGHHDRVVSLSLCSS- 132 (332)
Q Consensus 56 ~tv~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~-~~h~~~V~~v~~~~~- 132 (332)
..||+.+......+..+.... ..|..++.. +.+++.++ .+.+.++.+..++..... ..-.+.|.++++.+.
T Consensus 492 ~~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~----g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~ 565 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV----GRALYYLQIHPQELRQISHTEMEHEVACLDITPLG 565 (1158)
T ss_dssp SCEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE----TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCS
T ss_pred CEEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE----CCEEEEEEeeCCceeeecccCCCCceEEEEeecCC
Confidence 456777766555555554332 234444433 34666663 245667777655321111 123468999998763
Q ss_pred -----CCeEEEeeC-CCcEEEEeCCCceEEEEEEecC--cee---EEEcCCCeEEEEE-eCCEEEEEECccCCCCCee--
Q 020021 133 -----KDCFISGSL-DRTVLLWDQRAEKCQGLLRVQG--RPA---AAYDDQGLVFAVA-FGGYIRMFDARKYEKGPFD-- 198 (332)
Q Consensus 133 -----~~~l~s~s~-Dg~i~iWd~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~-~~~~i~vwd~~~~~~~~~~-- 198 (332)
+++++-|.+ |+++++.++..-.......+.. .+. ........++.++ .+|.+-.+.+... .+.+.
T Consensus 566 ~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~-tg~l~d~ 644 (1158)
T 3ei3_A 566 DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIE-TGLLSDR 644 (1158)
T ss_dssp SSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTT-TCCEEEE
T ss_pred CCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCC-CCccccc
Confidence 368899997 9999999998655554443322 111 1111223344455 3676644443321 11111
Q ss_pred -EEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcc-eEEEECCCC--CEEEEEcCCCc
Q 020021 199 -IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNST-LEASFSPEG--MFVISGSGDGS 274 (332)
Q Consensus 199 -~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~~v~~spdg--~~l~sgs~Dg~ 274 (332)
...++. .++.-..+...|..-+.+..+....++-.. +.... .+.....+ ....|+... .-++.. .++.
T Consensus 645 r~~~LG~--~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~----s~l~~~~v~~~~~F~se~~~~g~v~~-~~~~ 716 (1158)
T 3ei3_A 645 KKVTLGT--QPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVF----SNVNLKEVNYMCPLNSDGYPDSLALA-NNST 716 (1158)
T ss_dssp EEEECCS--SCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEE----EEBSSSCCCEEEEECCSSSTTEEEEE-CSSC
T ss_pred eeEEcCC--CceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEE----eccChHHhceEeccCcccCCCcEEEE-cCCc
Confidence 122222 234444444445444444445555555433 33221 11111222 233564422 233333 3456
Q ss_pred EEEEECCCCce--EEEecCCCCCCceEEeCCCeeEEEeccceEEEecc
Q 020021 275 VYAWSVRSGKE--VASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIP 320 (332)
Q Consensus 275 i~vWd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~l~t~~~d~~~w~~ 320 (332)
++|..+.+... +.++ .....+..++++|+.+.++.+..+-...+.
T Consensus 717 LrI~~i~~~~~~~~~~i-pL~~Tprri~y~~~~~~~~v~~~~~~~~~~ 763 (1158)
T 3ei3_A 717 LTIGTIDEIQKLHIRTV-PLYESPRKICYQEVSQCFGVLSSRIEVQDT 763 (1158)
T ss_dssp EEEEEECCSSSEEEEEE-ECSSEEEEEEEEGGGTEEEEEEEEEEEECS
T ss_pred eEEEEecccCCeeEEEE-eCCCCceEEEEcCCCCEEEEEEEecccccc
Confidence 99998865332 2222 234567889999998877776655444443
No 339
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.53 E-value=1.8 Score=43.53 Aligned_cols=38 Identities=32% Similarity=0.463 Sum_probs=33.0
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEee
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~ 73 (332)
.|.++...++..+++|-+.|+++|||++.++.|+.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677777888999999999999999999999987753
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=82.80 E-value=4.8 Score=37.73 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=49.8
Q ss_pred CceeEEEcCCCCEEEEEc-CCCeEEEEEccCC------eEe---EEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEE
Q 020021 208 DANVVKFSNDGRLMLLTT-MEGHIHVLDSFRG------TLL---STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYA 277 (332)
Q Consensus 208 ~v~~v~~s~dg~~l~~~~-~dg~i~i~d~~~~------~~~---~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~v 277 (332)
....+.++|||+++++++ .+.++.++|..+- +.+ ..........-...-.+|.++|.-..|---|..|--
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEE
Confidence 345688999999887765 6789999998631 110 000111111223345799999966666678999999
Q ss_pred EECCC
Q 020021 278 WSVRS 282 (332)
Q Consensus 278 Wd~~~ 282 (332)
|++.+
T Consensus 404 Wni~~ 408 (638)
T 3sbq_A 404 WNMEE 408 (638)
T ss_dssp EEHHH
T ss_pred EeccH
Confidence 99965
No 341
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=81.17 E-value=32 Score=31.27 Aligned_cols=95 Identities=7% Similarity=0.083 Sum_probs=53.4
Q ss_pred CceeEEEEccCCceE-EEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC-ceeEEEcCCCeEEE
Q 020021 100 DESLRLLSLHDNKYL-RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGLVFA 177 (332)
Q Consensus 100 d~~v~v~d~~~~~~~-~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 177 (332)
..++-+.|+.+++.+ +.--...+ .-.+|..+.+|--. ..++.++|+++........++. ...+.+-. ...++
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~Ads----AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis-~~~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISADS----AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCCSE----EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEE-TTEEE
T ss_pred CCeEEEEECCCCCcceecccccce----eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecC-CCeEE
Confidence 346777888775432 22222222 23467666655444 5789999999888777766543 22333322 23444
Q ss_pred EEeCCEEEEEECccCCCCCeeEEE
Q 020021 178 VAFGGYIRMFDARKYEKGPFDIFS 201 (332)
Q Consensus 178 ~~~~~~i~vwd~~~~~~~~~~~~~ 201 (332)
...+..|.-|++.. +..+..++.
T Consensus 121 lVT~taVyHWsi~~-~s~P~kvFd 143 (494)
T 1bpo_A 121 LVTDNAVYHWSMEG-ESQPVKMFD 143 (494)
T ss_dssp EECSSEEEEEESSS-SCCCEEEEE
T ss_pred EEcCCeeEEecccC-CCCchhhee
Confidence 55567788888754 233444443
No 342
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=81.08 E-value=3 Score=40.21 Aligned_cols=38 Identities=24% Similarity=0.466 Sum_probs=31.6
Q ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeee
Q 020021 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS 74 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~ 74 (332)
..|.++.+. ..+++|-+.|+++|+||+.++.++.+..-
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 457776664 67999999999999999999998877654
No 343
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.15 E-value=8.3 Score=38.78 Aligned_cols=38 Identities=13% Similarity=0.061 Sum_probs=32.7
Q ss_pred CcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe
Q 020021 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW 289 (332)
Q Consensus 252 ~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~ 289 (332)
+.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 45566778889999999999999999999999988764
No 344
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=78.97 E-value=48 Score=31.96 Aligned_cols=270 Identities=12% Similarity=0.064 Sum_probs=140.2
Q ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEE-eeec----ccceeEEEEccCCCEEEEecCCCCCceeEEEEcc
Q 020021 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT-INSK----KYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~-~~~~----~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~ 109 (332)
..|.++..+++|.+.+. .. +-+..+|..+++.... .... ...|..+.....+..+..+.. +-+..+|..
T Consensus 146 ~~i~~i~~d~~g~lWig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~----~Gl~~~~~~ 219 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVG-TY-NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE----GYLFQYFPS 219 (758)
T ss_dssp SCEEEEEECTTCCEEEE-ET-TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE----EEEEEEETT
T ss_pred CeEEEEEEcCCCCEEEE-eC-CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC----CCCeEEcCC
Confidence 45888888888887763 33 4577888876653221 1111 112555555555554554442 246778877
Q ss_pred CCceEEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe-------cC--ceeEEEcCCCeEEEEEe
Q 020021 110 DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV-------QG--RPAAAYDDQGLVFAVAF 180 (332)
Q Consensus 110 ~~~~~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~ 180 (332)
+++......-....|.++...+++...+ |+.+| +.+++..++........ .. ......+..+.+-.+..
T Consensus 220 ~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~ 297 (758)
T 3ott_A 220 TGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDNG-LYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTD 297 (758)
T ss_dssp TTEEEEEEEEEEEEEEEEEECTTCCEEE-EETTE-EEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEES
T ss_pred CCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCCc-eeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeC
Confidence 6653221111234578877766676544 34444 67778766543221111 00 11233345566666655
Q ss_pred CCEEEEEECccCCCCCeeEEEec-----CCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCe--EeEEeee----cCC
Q 020021 181 GGYIRMFDARKYEKGPFDIFSVG-----GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNV----KPV 249 (332)
Q Consensus 181 ~~~i~vwd~~~~~~~~~~~~~~~-----~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~--~~~~~~~----~~~ 249 (332)
.| +.++.. ...+..+... .....+.++...++|.+.+.. .+| +..++..++. ....+.. ...
T Consensus 298 ~G-l~~~~~----~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l 370 (758)
T 3ott_A 298 YG-ISLSRY----NSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG-ANG-LIRFTDPAGERHDAIWYRMGDKTYPL 370 (758)
T ss_dssp SS-EEEECC----CC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE-TTE-EEEESCTTSSCCCCEEECTTCSSSCC
T ss_pred Cc-cccccc----CCceeEEecccCCCCCCCceEEEEEEcCCCCEEEee-CCc-ceeecccccccceeEEeccCCcCCCC
Confidence 55 443321 1122222211 111346777778888877654 444 5566654432 1111211 011
Q ss_pred CCCcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEec-C-----CCCCCceEEeCCCeeEEEec-cceEEEeccc
Q 020021 250 SRNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM-S-----FDTEPPVIKWTPGSLMFVTG-SSELSFWIPD 321 (332)
Q Consensus 250 ~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~~-~-----~~~~v~~l~~sp~~~~l~t~-~~d~~~w~~~ 321 (332)
..+.+.++.-.++|+..+. + ++-+..+|..+++...-.. . ....|.++.-.+++++.+.. +..+.+++++
T Consensus 371 ~~~~v~~i~~d~~g~lWig-t-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~ 447 (758)
T 3ott_A 371 SHNRIRHIYEDKEQQLWIA-T-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKH 447 (758)
T ss_dssp SCSCEEEEEECTTSCEEEE-E-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHH
T ss_pred CCCceEEEEECCCCCEEEE-e-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccc
Confidence 2345667777788877664 3 4569999988765432211 1 11235667777777765544 3446666543
No 345
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=75.54 E-value=2.2 Score=43.86 Aligned_cols=37 Identities=32% Similarity=0.477 Sum_probs=30.9
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEee
Q 020021 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73 (332)
Q Consensus 37 I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~ 73 (332)
|.++...++..+++|-+.|+++||||+.++.|+.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3445556778899999999999999999999988754
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=74.28 E-value=38 Score=28.44 Aligned_cols=177 Identities=14% Similarity=0.121 Sum_probs=85.0
Q ss_pred eeEEEEccCCceEE-EeecccccEEEEEecCCCCeEEEeeC----CC-------cEEEEeCCCceEEEEEEecC---cee
Q 020021 102 SLRLLSLHDNKYLR-YFKGHHDRVVSLSLCSSKDCFISGSL----DR-------TVLLWDQRAEKCQGLLRVQG---RPA 166 (332)
Q Consensus 102 ~v~v~d~~~~~~~~-~~~~h~~~V~~v~~~~~~~~l~s~s~----Dg-------~i~iWd~~~~~~~~~~~~~~---~~~ 166 (332)
.+..||..+++-.. .+.....+-.......+++.++.|+. ++ .+..+|..+++....-.++. ...
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 36778887765332 11111111122223456778888873 12 16678887776543322221 112
Q ss_pred EEEcCCCeEEEEEeC-------CEEEEEECccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcC------CCeEEEE
Q 020021 167 AAYDDQGLVFAVAFG-------GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM------EGHIHVL 233 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~-------~~i~vwd~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~------dg~i~i~ 233 (332)
++...+..++.++.+ ..+.+||..... ...... .........+...++++++.|+. ...+.+|
T Consensus 105 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~---W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 105 LGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAK---WSEVKN-LPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp EEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTE---EEEECC-CSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEE
T ss_pred eEEECCEEEEEcCccCCCCcccceEEEEeCCCCC---EeECCC-CCCcccccEEEEECCEEEEEcCCCCCCCccceEEEE
Confidence 222334445555543 246777765421 111100 00000111122257888888764 2458999
Q ss_pred EccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCC-----cEEEEECCCCce
Q 020021 234 DSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG-----SVYAWSVRSGKE 285 (332)
Q Consensus 234 d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg-----~i~vWd~~~~~~ 285 (332)
|..+.+-...-. .+........+. -+++.++.|+.++ .+.++|+.+.+.
T Consensus 181 d~~~~~W~~~~~-~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 181 NPKKGDWKDLAP-MKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp ETTTTEEEEECC-CSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred cCCCCEEEECCC-CCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 988765432211 111111111222 3677777776543 577899887654
No 347
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=73.53 E-value=67 Score=30.92 Aligned_cols=275 Identities=9% Similarity=0.075 Sum_probs=139.5
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEE
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 115 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~ 115 (332)
.|.++..++++..|-.|. ++-+..+|..+++...........|..++...++. +..+.. +-+.+++..+++...
T Consensus 192 ~i~~i~~d~~~~~lWigt-~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigT~----~Gl~~~~~~~~~~~~ 265 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGT-EGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGD-LLAGTD----NGLYVYHNDTTPLQH 265 (758)
T ss_dssp CEEEEEEETTTTEEEEEE-EEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCC-EEEEET----TEEEEECCTTSCCEE
T ss_pred eeEEEEEECCCCEEEEEE-CCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCC-EEEEeC----CceeEEecCCCcEEE
Confidence 488888887766433333 34688889877654322111223355555555544 333332 236677776654322
Q ss_pred Eeec-------ccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe---------cCceeEEEcCCCeEEEEE
Q 020021 116 YFKG-------HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV---------QGRPAAAYDDQGLVFAVA 179 (332)
Q Consensus 116 ~~~~-------h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 179 (332)
.... ....|.++....+|. |.-|...| +.+.... .. ...+.. ........+.++.+..+.
T Consensus 266 ~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~-~~-~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt 341 (758)
T 3ott_A 266 IIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYN-SA-LQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG 341 (758)
T ss_dssp ECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECCC-C--CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE
T ss_pred EEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccC-Cc-eeEEecccCCCCCCCceEEEEEEcCCCCEEEee
Confidence 2110 124588887766665 44444556 4444321 11 111111 011123334566666555
Q ss_pred eCCEEEEEECccCCCCCeeEEEecC-----CCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeee-cC---CC
Q 020021 180 FGGYIRMFDARKYEKGPFDIFSVGG-----DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV-KP---VS 250 (332)
Q Consensus 180 ~~~~i~vwd~~~~~~~~~~~~~~~~-----~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~---~~ 250 (332)
. +-+..++........+..+.... ....|.++...++|.+.+.. ++-+..+|..+++... +.. .. ..
T Consensus 342 ~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt--~~GL~~~~~~~~~~~~-~~~~~~~~~~~ 417 (758)
T 3ott_A 342 A-NGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT--DGSINRYDYATRQFIH-YNIVDNTGTYN 417 (758)
T ss_dssp T-TEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTTEEEE-EEEECCC--CB
T ss_pred C-CcceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe--CCcHhhcCcCCCcEEE-eecCCCcCCCC
Confidence 4 44666654432111222222110 11246777778888876644 4578889988776532 221 11 12
Q ss_pred CCcceEEEECCCCCEEEEEcCCCcEEEEECCCC-----ceE---EEec---CC-CCCCceEEeCCCeeEEE--eccceEE
Q 020021 251 RNSTLEASFSPEGMFVISGSGDGSVYAWSVRSG-----KEV---ASWM---SF-DTEPPVIKWTPGSLMFV--TGSSELS 316 (332)
Q Consensus 251 ~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~-----~~~---~~~~---~~-~~~v~~l~~sp~~~~l~--t~~~d~~ 316 (332)
...+.++...++|+..+ |+..+-+.++|..+. +.. ..+. .. ...|.++...+++++.+ +....+.
T Consensus 418 ~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~ 496 (758)
T 3ott_A 418 TNWTYYIFEDTAGQLWI-STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGID 496 (758)
T ss_dssp SSSEEEEEECTTSEEEE-EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEE
T ss_pred CceEEEEEEcCCCCEEE-EECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcE
Confidence 24566777777777665 555556888885421 111 1111 11 12367788788888776 3333466
Q ss_pred Eeccccccc
Q 020021 317 FWIPDLSKL 325 (332)
Q Consensus 317 ~w~~~~~~~ 325 (332)
.+++...+.
T Consensus 497 ~~d~~~~~~ 505 (758)
T 3ott_A 497 KINPRTREV 505 (758)
T ss_dssp EEETTTTEE
T ss_pred EEeCCCCce
Confidence 666654433
No 348
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=73.24 E-value=99 Score=32.75 Aligned_cols=218 Identities=12% Similarity=0.231 Sum_probs=104.7
Q ss_pred CCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEeecccccEEEEEecC-C
Q 020021 54 DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-S 132 (332)
Q Consensus 54 ~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~~h~~~V~~v~~~~-~ 132 (332)
...+|-|-|+.++.... ..+-...+.-.+|..+.++.-+ ..++.++|+++.+.++.+.=.. .|.-=.|-. +
T Consensus 46 ~~~~vvIidl~~~~~~~---rrpi~AdsAIMnP~~~iiALra----g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~ 117 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPI---RRPISADSAIMNPASKVIALKA----GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN 117 (1630)
T ss_pred CCceEEEEECCCCCCcc---cccccchhhccCCCcceEEEec----CCeEEEeehHHhhhhcccccCC-CceEEEecCCC
Confidence 33467777777654321 1111112334566665555443 3689999998877666554333 343334433 2
Q ss_pred CCeEEEeeCCCcEEEEeCCCc-eEEEEEEec----CceeE--EEcCCC--eEEEEE------eCCEEEEEECccCCCCC-
Q 020021 133 KDCFISGSLDRTVLLWDQRAE-KCQGLLRVQ----GRPAA--AYDDQG--LVFAVA------FGGYIRMFDARKYEKGP- 196 (332)
Q Consensus 133 ~~~l~s~s~Dg~i~iWd~~~~-~~~~~~~~~----~~~~~--~~~~~~--~~~~~~------~~~~i~vwd~~~~~~~~- 196 (332)
.--+|| +..|.-|++... .+...+..+ ..... ..+++. .++.+. ..|.+.+|.+.......
T Consensus 118 ~l~lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~i 194 (1630)
T 1xi4_A 118 TVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI 194 (1630)
T ss_pred eeEEEc---CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhh
Confidence 223444 467899998532 222222111 11111 112222 222222 13678888765432211
Q ss_pred ------eeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCC---eEeEE-----eeecC-CCCCcceEEEECC
Q 020021 197 ------FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG---TLLST-----YNVKP-VSRNSTLEASFSP 261 (332)
Q Consensus 197 ------~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~---~~~~~-----~~~~~-~~~~~~~~v~~sp 261 (332)
|..+.+.+...+..-++|.... ...++++|.++... ..... ....+ ........+-.|+
T Consensus 195 egha~~F~~~~~~~~~~~~~l~~f~~~~------~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~ 268 (1630)
T 1xi4_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRG------QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE 268 (1630)
T ss_pred hHhHhhhheeccCCCCCCceEEEEEEec------CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecc
Confidence 1122222222222222332111 11268888887442 11000 00000 0122233455677
Q ss_pred CCCEEEEEcCCCcEEEEECCCCceEEE
Q 020021 262 EGMFVISGSGDGSVYAWSVRSGKEVAS 288 (332)
Q Consensus 262 dg~~l~sgs~Dg~i~vWd~~~~~~~~~ 288 (332)
.-..+.--+.-|.|+++|+.++.++..
T Consensus 269 k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 269 KHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred ccCEEEEEecCceEEEEecccchhhhh
Confidence 767777888899999999999987643
No 349
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=72.17 E-value=4.2 Score=41.84 Aligned_cols=38 Identities=13% Similarity=0.061 Sum_probs=32.3
Q ss_pred CcceEEEECCCCCEEEEEcCCCcEEEEECCCCceEEEe
Q 020021 252 NSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASW 289 (332)
Q Consensus 252 ~~~~~v~~spdg~~l~sgs~Dg~i~vWd~~~~~~~~~~ 289 (332)
+.+.+++..++..++++-+.|+++|||++.+++++.+.
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 44556677789999999999999999999999987764
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=70.41 E-value=60 Score=29.44 Aligned_cols=108 Identities=10% Similarity=0.012 Sum_probs=57.0
Q ss_pred cEEEEEECCCCC-EEEEEeCCCcEEEEEcCCCe---eeEEee----e-----cccceeEEEEccC---CCEEEEecC-CC
Q 020021 36 RISSMDFHKSSS-YLVTASDDESIRLYDVTAAT---CLKTIN----S-----KKYGVDLVCFTSH---PTTVIYSSK-NG 98 (332)
Q Consensus 36 ~I~~i~~s~dg~-~l~tgs~D~tv~iwd~~~~~---~~~~~~----~-----~~~~v~~~~~~~~---~~~~~~~s~-~g 98 (332)
.-..|+|.|||. .|+.+...+.|++++..... .+..+. . ...+...++|+|+ ...+++..+ ..
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 345899999996 44456778999999754321 111111 1 1234567888875 223333211 11
Q ss_pred -------CC--ceeEEEEccC----------CceEEEee--cccccEEEEEecCCCCeEEEeeCCC
Q 020021 99 -------WD--ESLRLLSLHD----------NKYLRYFK--GHHDRVVSLSLCSSKDCFISGSLDR 143 (332)
Q Consensus 99 -------~d--~~v~v~d~~~----------~~~~~~~~--~h~~~V~~v~~~~~~~~l~s~s~Dg 143 (332)
.+ ..|.-|.+.. .+.+..+. ........|.|.|||.+.++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 01 1233344432 12222222 1223467899999999777766543
No 351
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=68.48 E-value=63 Score=28.53 Aligned_cols=82 Identities=11% Similarity=0.030 Sum_probs=52.4
Q ss_pred CcEEEEEECCCCCEEE--EEeCC-------------CcEEEEEcCCC--eeeEEeeecc------cceeEEEEc---cC-
Q 020021 35 GRISSMDFHKSSSYLV--TASDD-------------ESIRLYDVTAA--TCLKTINSKK------YGVDLVCFT---SH- 87 (332)
Q Consensus 35 ~~I~~i~~s~dg~~l~--tgs~D-------------~tv~iwd~~~~--~~~~~~~~~~------~~v~~~~~~---~~- 87 (332)
-.|..+.+++.+.+-+ +|--+ -.|.+||+.++ +.++.+.... .....+.+. +.
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 3577888888886532 23211 25889999999 8888876432 224445555 11
Q ss_pred --CCEEEEecCCCCCceeEEEEccCCceEEEe
Q 020021 88 --PTTVIYSSKNGWDESLRLLSLHDNKYLRYF 117 (332)
Q Consensus 88 --~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~ 117 (332)
....++.+..+ ...+.|+|+.+++.-+.+
T Consensus 167 ~c~~~~aYItD~~-~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 167 DCSETFVYITNFL-RGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp TSCSEEEEEEETT-TTEEEEEETTTTEEEEEE
T ss_pred CCCccEEEEEcCC-CCcEEEEECCCCcEEEEc
Confidence 13555554333 678999999998876655
No 352
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=67.98 E-value=61 Score=28.22 Aligned_cols=85 Identities=5% Similarity=0.048 Sum_probs=49.3
Q ss_pred ceeEEEEccCCce-EEEeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEecC-ceeEEEcCCCeEEEE
Q 020021 101 ESLRLLSLHDNKY-LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGLVFAV 178 (332)
Q Consensus 101 ~~v~v~d~~~~~~-~~~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 178 (332)
.++-+.|+++++. .+.--...+.| .+|..+.+|--. ..+++++|+++...+....++. ...+.+-. ...++.
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~AdsAI----MnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis-~~~L~l 122 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPISADSAI----MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVAL 122 (365)
T ss_dssp EEEEEEETTSTTSCEEEECCCSEEE----ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECS-SSEEEE
T ss_pred CEEEEEECCCCCCccccccccceee----eCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecC-CCeEEE
Confidence 4677778777543 22222223333 367666555444 5789999999888777766643 22333323 334455
Q ss_pred EeCCEEEEEECcc
Q 020021 179 AFGGYIRMFDARK 191 (332)
Q Consensus 179 ~~~~~i~vwd~~~ 191 (332)
-.+..|.-|++..
T Consensus 123 VT~taVyHWs~~~ 135 (365)
T 2xzh_A 123 VTDNAVYHWSMEG 135 (365)
T ss_dssp EESSEEEEEESST
T ss_pred EcCCcEEEEcccC
Confidence 5566778887754
No 353
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=63.29 E-value=19 Score=33.84 Aligned_cols=68 Identities=12% Similarity=0.091 Sum_probs=46.0
Q ss_pred eEEEECCCCCEEEEEc-CCCcEEEEECCCC------ce------EEEecCCCCCCceEEeCCCeeEEEecc--ceEEEec
Q 020021 255 LEASFSPEGMFVISGS-GDGSVYAWSVRSG------KE------VASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWI 319 (332)
Q Consensus 255 ~~v~~spdg~~l~sgs-~Dg~i~vWd~~~~------~~------~~~~~~~~~~v~~l~~sp~~~~l~t~~--~d~~~w~ 319 (332)
-.+..+|||+|++.++ .+.++.|+|+.+- +. +..-....-.+.+.+|.++|....|-. +.+--|+
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 3588999999988775 4679999999741 11 111122344568899999997666643 4577777
Q ss_pred ccc
Q 020021 320 PDL 322 (332)
Q Consensus 320 ~~~ 322 (332)
.+.
T Consensus 406 i~~ 408 (638)
T 3sbq_A 406 MEE 408 (638)
T ss_dssp HHH
T ss_pred ccH
Confidence 654
No 354
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=61.19 E-value=33 Score=32.34 Aligned_cols=58 Identities=24% Similarity=0.352 Sum_probs=39.3
Q ss_pred eeEEEcCCCCEEEEEcCC------------CeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEE
Q 020021 210 NVVKFSNDGRLMLLTTME------------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269 (332)
Q Consensus 210 ~~v~~s~dg~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sg 269 (332)
--|+|+|.|.++++-..+ ..+.+.+..++++..-+. .+ ....++.++|+||++.|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~-~P-~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE-CC-TTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe-CC-CCccCcCeeECCCCCEEEEE
Confidence 458999999977765432 245666767777654333 22 23466778999999988765
No 355
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=59.73 E-value=15 Score=35.41 Aligned_cols=36 Identities=8% Similarity=0.097 Sum_probs=28.9
Q ss_pred EEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEEe
Q 020021 124 VVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV 161 (332)
Q Consensus 124 V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~ 161 (332)
|.++.+ +..++++-+.|+++|+||++++++.....+
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444433 467999999999999999999998877655
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=59.20 E-value=77 Score=26.37 Aligned_cols=221 Identities=11% Similarity=0.048 Sum_probs=93.1
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEE
Q 020021 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 115 (332)
Q Consensus 36 ~I~~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~ 115 (332)
.|..|+..... .++. . |+.|..|-.+..-++..-......|..++.-.... ++. . |+.+..|-.+....+.
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs-~~l-~----~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHS-LAL-K----DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEE-EEE-E----TTEEEEEECCTTSTTC
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEE-EEE-E----CCEEEEeeCCCCCCCC
Confidence 46666665432 2332 4 89999997654222211001111233333322211 111 1 4566666543321111
Q ss_pred EeecccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEEEE-ecCceeEEEcCCCeEEEEEeCCEEEEEECccCCC
Q 020021 116 YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-VQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEK 194 (332)
Q Consensus 116 ~~~~h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~ 194 (332)
.-..-...|..++.... +.+.-. ||.+..|=........... .......+..-....++.. ++.+..|-.....
T Consensus 96 ~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~g- 170 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFG- 170 (282)
T ss_dssp CCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTS-
T ss_pred CCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCC-
Confidence 11111246777765543 333334 8999999643311110000 0001111111222333344 7888888543221
Q ss_pred CCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCc
Q 020021 195 GPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS 274 (332)
Q Consensus 195 ~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~ 274 (332)
.+.... .....+..++-..... ++- .+|.++.|=......+.. .......+..++...+...+++ ||.
T Consensus 171 -qlg~p~--~~~~~v~~i~~G~~hs--~al-~~G~v~~wG~n~~gqlg~---p~~~~~~v~~i~~G~~h~~al~---~g~ 238 (282)
T 3qhy_B 171 -QTTVPA--EAQSGVDDVAGGIFHS--LAL-KDGKVIAWGDNRYKQTTV---PTEALSGVSAIASGEWYSLALK---NGK 238 (282)
T ss_dssp -TTSCCG--GGGSSEEEEEECSSEE--EEE-ETTEEEEEECCTTSTTCC---CGGGGSSCCEEEECSSCEEEEE---TTE
T ss_pred -CCCCce--ecCCCeEEEEecCCEE--EEE-ECCeEEEEECCCCCCCCC---CcccCCCceEEEcCCCEEEEEE---CCE
Confidence 110000 0012333343333222 222 588888886433211110 0001123556665554444443 899
Q ss_pred EEEEECCC
Q 020021 275 VYAWSVRS 282 (332)
Q Consensus 275 i~vWd~~~ 282 (332)
++.|-...
T Consensus 239 v~~wG~n~ 246 (282)
T 3qhy_B 239 VIAWGSSR 246 (282)
T ss_dssp EEEESTTC
T ss_pred EEEecCCC
Confidence 99997644
No 357
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=58.36 E-value=51 Score=30.95 Aligned_cols=60 Identities=23% Similarity=0.323 Sum_probs=41.0
Q ss_pred CceeEEEcCCCCEEEEEcC------------CCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEE
Q 020021 208 DANVVKFSNDGRLMLLTTM------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269 (332)
Q Consensus 208 ~v~~v~~s~dg~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sg 269 (332)
....++|+++|.+.+.... ...+..++..++++..-+.. + ....++.++||||++.|+.+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~-P-~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-P-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC-C-TTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC-C-CCccccCCEECCCCCEEEEE
Confidence 4567899999998885432 12677778777876543321 1 12345789999999998876
No 358
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=57.52 E-value=1.4e+02 Score=28.65 Aligned_cols=151 Identities=13% Similarity=0.126 Sum_probs=78.3
Q ss_pred CCCCeEEEeeCC----CcEEEEeCCCceEEEEE-E-----ec----CceeEEEc-CCCeEEEEEeC------CEEEEEEC
Q 020021 131 SSKDCFISGSLD----RTVLLWDQRAEKCQGLL-R-----VQ----GRPAAAYD-DQGLVFAVAFG------GYIRMFDA 189 (332)
Q Consensus 131 ~~~~~l~s~s~D----g~i~iWd~~~~~~~~~~-~-----~~----~~~~~~~~-~~~~~~~~~~~------~~i~vwd~ 189 (332)
.++..++.||.+ ..+.++|+.++.....- . ++ ....+... .+..++.++.+ +.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456777788764 35778888877654433 1 11 11223332 33334444432 24667776
Q ss_pred ccCCCCCeeEEEecCCCCCceeEEEcCCCCEEEEEcCCC--eEEEEEccCCeEeEEeee--cCCCCCcceEEEECCC-CC
Q 020021 190 RKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG--HIHVLDSFRGTLLSTYNV--KPVSRNSTLEASFSPE-GM 264 (332)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~~dg--~i~i~d~~~~~~~~~~~~--~~~~~~~~~~v~~spd-g~ 264 (332)
.... ..........-.-.+++.-.++++++.|+.++ .+.+||..+.+-...-.. .+........+.+..+ ++
T Consensus 476 ~t~~---W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 476 KTRE---WSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp TTTE---EEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred CCCc---EEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCE
Confidence 5421 00000000000112333334889999988665 689999887653321110 1112222223555555 77
Q ss_pred EEEEEcC--C-----CcEEEEECCCCc
Q 020021 265 FVISGSG--D-----GSVYAWSVRSGK 284 (332)
Q Consensus 265 ~l~sgs~--D-----g~i~vWd~~~~~ 284 (332)
.++.|+. + ..+.+||+.+.+
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 7777876 2 358899998776
No 359
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=42.98 E-value=2.3e+02 Score=27.18 Aligned_cols=240 Identities=14% Similarity=0.148 Sum_probs=116.0
Q ss_pred EEEEE-ECCCCCEEEE-----EeCCCcEEEEEcCCCeeeEE-ee-eccc------ceeEEEEccCCCEEEEec-------
Q 020021 37 ISSMD-FHKSSSYLVT-----ASDDESIRLYDVTAATCLKT-IN-SKKY------GVDLVCFTSHPTTVIYSS------- 95 (332)
Q Consensus 37 I~~i~-~s~dg~~l~t-----gs~D~tv~iwd~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~~~~~s------- 95 (332)
...++ ++|++++++- |+.-.++|++|+.+++.+.. +. ..+. ....++|. +...++++.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCB
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCc
Confidence 45666 8999987643 22335899999999887631 22 1000 11334665 344454432
Q ss_pred -CCCCCceeEEEEccCCc--eEEEeecccccE-EEEEecCCCC-----eEEEeeCC---CcEEEEeCCC--ceEEEEEEe
Q 020021 96 -KNGWDESLRLLSLHDNK--YLRYFKGHHDRV-VSLSLCSSKD-----CFISGSLD---RTVLLWDQRA--EKCQGLLRV 161 (332)
Q Consensus 96 -~~g~d~~v~v~d~~~~~--~~~~~~~h~~~V-~~v~~~~~~~-----~l~s~s~D---g~i~iWd~~~--~~~~~~~~~ 161 (332)
..+....++.|.+.+.. -...+.+....+ .+...+++++ .+++.+.| ..+.+.|... +.. ..+..
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 288 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINM 288 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCS
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeec
Confidence 12344678888776542 234455444333 3445566665 35655433 2344445432 221 12222
Q ss_pred cCceeEEEcCCCeEEE-E----------EeCCEEEEEECccCCC-----CCeeEEEecCCCCCceeEEEcCCCCEEEEEc
Q 020021 162 QGRPAAAYDDQGLVFA-V----------AFGGYIRMFDARKYEK-----GPFDIFSVGGDISDANVVKFSNDGRLMLLTT 225 (332)
Q Consensus 162 ~~~~~~~~~~~~~~~~-~----------~~~~~i~vwd~~~~~~-----~~~~~~~~~~~~~~v~~v~~s~dg~~l~~~~ 225 (332)
+..........+.++. . .-.+.|...|+..... .....+-.......+..+.+..+ .++++..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~ 367 (711)
T 4hvt_A 289 PSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATY 367 (711)
T ss_dssp CTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEE
T ss_pred CCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEE
Confidence 2222211222333222 1 1235677777765421 11222111112224556677765 5666666
Q ss_pred CCC--eEEEEEccCCeE-eEE-eeecCCCCCcceEEEECCCCC-EEEEEcC---CCcEEEEECC
Q 020021 226 MEG--HIHVLDSFRGTL-LST-YNVKPVSRNSTLEASFSPEGM-FVISGSG---DGSVYAWSVR 281 (332)
Q Consensus 226 ~dg--~i~i~d~~~~~~-~~~-~~~~~~~~~~~~~v~~spdg~-~l~sgs~---Dg~i~vWd~~ 281 (332)
.++ .+.++|+.++.. ... +.... ...+....+++++. ++++.+. =+.++.+|+.
T Consensus 368 ~~~~~~l~~~~~~~g~~~~~~~i~lp~--~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 368 DNVVAKVVTFTLENEQWTKPVVLKLPY--QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp ETTEEEEEEECEETTEECCCEEECCCS--TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred ECCEEEEEEEECCCCceEEEeccCCCC--CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 666 467777766641 222 22111 12333445566664 4444433 2478888876
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=40.83 E-value=1e+02 Score=29.01 Aligned_cols=58 Identities=12% Similarity=0.187 Sum_probs=38.9
Q ss_pred EEEEEECCCCCEEEEEeCC------------CcEEEEEcCCCeeeEEeeecc-cceeEEEEccCCCEEEEe
Q 020021 37 ISSMDFHKSSSYLVTASDD------------ESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYS 94 (332)
Q Consensus 37 I~~i~~s~dg~~l~tgs~D------------~tv~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~ 94 (332)
.-.|.|+|+|++++.-..+ ..+.+.+..+++..+.+.... ..++.++|+|+++.+++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4578999999877653322 235555666777766565543 457789999998877654
No 361
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=38.93 E-value=1e+02 Score=21.82 Aligned_cols=45 Identities=11% Similarity=-0.035 Sum_probs=22.4
Q ss_pred EEEEEcCCCcEEEEECCCCceEEEecCCC-CCCceEEeCCCeeEEEe
Q 020021 265 FVISGSGDGSVYAWSVRSGKEVASWMSFD-TEPPVIKWTPGSLMFVT 310 (332)
Q Consensus 265 ~l~sgs~Dg~i~vWd~~~~~~~~~~~~~~-~~v~~l~~sp~~~~l~t 310 (332)
..+.-..||.+.+.|- .++.+..-.... .....+.+-++|.+++-
T Consensus 63 ~~l~l~~dGNLVl~d~-~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~ 108 (119)
T 1b2p_A 63 CRAVLQPDGVLVVITN-ENVTVWQSPVAGKAGHYVLVLQPDRNVVIY 108 (119)
T ss_dssp CEEEECTTSCEEEECT-TCCEEEECSCCCCSSCEEEEECTTSCEEEE
T ss_pred eEEEEccCCEEEEEeC-CCcEEEcCCCCCCCCCEEEEEECCCcEEEE
Confidence 3445556777777763 344443221111 12345666677765443
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=35.06 E-value=96 Score=29.11 Aligned_cols=57 Identities=18% Similarity=0.210 Sum_probs=36.3
Q ss_pred cceEEEECCCCCEEEEEcCC------------CcEEEEECCCCceEEEec-CCCCCCceEEeCCCeeEEE
Q 020021 253 STLEASFSPEGMFVISGSGD------------GSVYAWSVRSGKEVASWM-SFDTEPPVIKWTPGSLMFV 309 (332)
Q Consensus 253 ~~~~v~~spdg~~l~sgs~D------------g~i~vWd~~~~~~~~~~~-~~~~~v~~l~~sp~~~~l~ 309 (332)
....+.|.++|.+.++-... ..++..+..+++...-+. ....+++-++|+||++.|-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLf 546 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEE
Confidence 34468999999988843211 146666666666433232 2235679999999987553
No 363
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=34.84 E-value=1.9e+02 Score=23.83 Aligned_cols=181 Identities=10% Similarity=0.037 Sum_probs=80.8
Q ss_pred ccEEEEEecCCCCeEEEeeCCCcEEEEeCCCceEEEE-EEecCceeEEEcCCCeEEEEEeCCEEEEEECccCCCCCeeEE
Q 020021 122 DRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL-LRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIF 200 (332)
Q Consensus 122 ~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~~~~ 200 (332)
..|..++.......++ . ||.+..|-....-.... .........+..-....++.. ++.|..|=..... .+...
T Consensus 63 ~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~g--qlg~~ 136 (282)
T 3qhy_B 63 SGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYALK-DGKVIAWGDDSDG--QTTVP 136 (282)
T ss_dssp SCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTS--TTSCC
T ss_pred CCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCC--cCCCC
Confidence 3566665543332223 4 89999986432111110 000011111112233445556 8888888543221 11100
Q ss_pred EecCCCCCceeEEEcCCCCEEEEEcCCCeEEEEEccCCeEeEEeeecCCCCCcceEEEECCCCCEEEEEcCCCcEEEEEC
Q 020021 201 SVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVYAWSV 280 (332)
Q Consensus 201 ~~~~~~~~v~~v~~s~dg~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~v~~spdg~~l~sgs~Dg~i~vWd~ 280 (332)
. .....+..++.... ..+.-. ||.++.|-......+.. .......+..++...+.. +.- .||.++.|-.
T Consensus 137 ~--~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~---p~~~~~~v~~i~~G~~hs--~al-~~G~v~~wG~ 205 (282)
T 3qhy_B 137 A--EAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTV---PAEAQSGVDDVAGGIFHS--LAL-KDGKVIAWGD 205 (282)
T ss_dssp G--GGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSC---CGGGGSSEEEEEECSSEE--EEE-ETTEEEEEEC
T ss_pred c--cCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCC---ceecCCCeEEEEecCCEE--EEE-ECCeEEEEEC
Confidence 0 01123333333322 222223 68888886533111110 000113455565544333 333 5999999976
Q ss_pred CCCceEEEecCCCCCCceEEeCCCeeEEEeccceEEEecc
Q 020021 281 RSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIP 320 (332)
Q Consensus 281 ~~~~~~~~~~~~~~~v~~l~~sp~~~~l~t~~~d~~~w~~ 320 (332)
.....+.........|..|+-...-..+++ ..++..|-.
T Consensus 206 n~~gqlg~p~~~~~~v~~i~~G~~h~~al~-~g~v~~wG~ 244 (282)
T 3qhy_B 206 NRYKQTTVPTEALSGVSAIASGEWYSLALK-NGKVIAWGS 244 (282)
T ss_dssp CTTSTTCCCGGGGSSCCEEEECSSCEEEEE-TTEEEEEST
T ss_pred CCCCCCCCCcccCCCceEEEcCCCEEEEEE-CCEEEEecC
Confidence 543222222122235667776666566666 555666643
No 364
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=29.40 E-value=1.4e+02 Score=20.51 Aligned_cols=41 Identities=12% Similarity=0.145 Sum_probs=17.8
Q ss_pred EcCCCcEEEEECCCCceEEEecCCC-CCCceEEeCCCeeEEEe
Q 020021 269 GSGDGSVYAWSVRSGKEVASWMSFD-TEPPVIKWTPGSLMFVT 310 (332)
Q Consensus 269 gs~Dg~i~vWd~~~~~~~~~~~~~~-~~v~~l~~sp~~~~l~t 310 (332)
-..||.+.+.|- +++.+-.-.... .....+..-+||.+++.
T Consensus 57 l~~dGnLvL~d~-~~~~vWss~t~~~~~~~~l~L~ddGNlVly 98 (105)
T 4h3o_A 57 LQSDGNFVVYDS-SGRSLWASHSTRGSGNYILILQDDGNVIIY 98 (105)
T ss_dssp ECTTSCEEEECT-TCCEEEECCCCCCSSCEEEEECTTSCEEEE
T ss_pred EeCCccEEEECC-CcEEEEEecCCCCCCCEEEEEeCCCeEEEE
Confidence 345666666653 233333221111 11223445556655554
No 365
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=24.86 E-value=1.8e+02 Score=20.23 Aligned_cols=12 Identities=8% Similarity=0.119 Sum_probs=5.2
Q ss_pred EEeCCCeeEEEe
Q 020021 299 IKWTPGSLMFVT 310 (332)
Q Consensus 299 l~~sp~~~~l~t 310 (332)
+.+..+|.+++.
T Consensus 61 l~l~~dGNLVl~ 72 (113)
T 3mez_B 61 MRLGHSGELDIT 72 (113)
T ss_dssp EEECTTSCEEEE
T ss_pred EEEeCCCcEEEE
Confidence 344444444443
No 366
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=24.28 E-value=3.5e+02 Score=25.75 Aligned_cols=58 Identities=21% Similarity=0.269 Sum_probs=36.5
Q ss_pred CEEEEEcCCCeEEEE-EccCCe-EeEEeeecCCCCCcceEEEECCCC--CEEEEEcCCCcEEE
Q 020021 219 RLMLLTTMEGHIHVL-DSFRGT-LLSTYNVKPVSRNSTLEASFSPEG--MFVISGSGDGSVYA 277 (332)
Q Consensus 219 ~~l~~~~~dg~i~i~-d~~~~~-~~~~~~~~~~~~~~~~~v~~spdg--~~l~sgs~Dg~i~v 277 (332)
+.+..|+.+|.|+-. -..... .+.+.... ....++..+.++++. .+|+.++..+.++|
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~-~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLF-QDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECC-TTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEeccc-CCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 367778899987543 333222 23333222 123567788999988 99999988776655
No 367
>3izo_F Fiber; pentameric penton base, trimeri viral protein; 3.60A {Human adenovirus 5}
Probab=22.46 E-value=3.4e+02 Score=25.34 Aligned_cols=104 Identities=13% Similarity=0.234 Sum_probs=56.5
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCeeeEEeeecccceeEEEEccCCCEEEEecCCCCCceeEEEEccCCceEEEee
Q 020021 39 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK 118 (332)
Q Consensus 39 ~i~~s~dg~~l~tgs~D~tv~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~g~d~~v~v~d~~~~~~~~~~~ 118 (332)
.+.|...|.+.++-..+....+|-..+...-..+....+.-..+|+...+..++. +|.+.-++ +.+. .+.
T Consensus 380 gL~f~s~G~i~~~~~~~~~~TLWTtpdPspNc~i~~~~D~KltL~LtK~Gs~Vlg--------tvsl~~v~-g~~~-~i~ 449 (581)
T 3izo_F 380 GLSFDSTGAITVGNKNNDKLTLWTTPAPSPNCRLNAEKDAKLTLVLTKCGSQILA--------TVSVLAVK-GSLA-PIS 449 (581)
T ss_pred ceeecCCCcEEecCCCCCCccccCCCCCCCCeEEecCCCcEEEEEEEecCCEEEE--------EEEEEEec-cceE-ecC
Confidence 5677777777776666667888966433322344444444445666666655432 23333222 2221 112
Q ss_pred c-ccccEEEEEecCCCCeEEEeeCCCcEEEEeCCCce
Q 020021 119 G-HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK 154 (332)
Q Consensus 119 ~-h~~~V~~v~~~~~~~~l~s~s~Dg~i~iWd~~~~~ 154 (332)
. +..--..+.|...|..+-+++.++. .|..+.+.
T Consensus 450 ~t~~~~~i~L~FD~~G~Ll~~s~l~~~--~W~~r~~~ 484 (581)
T 3izo_F 450 GTVQSAHLIIRFDENGVLLNNSFLDPE--YWNFRNGD 484 (581)
T ss_pred CCcccEEEEEEECCCCCCCcCCCCCcc--cccccCCC
Confidence 1 2222335678778876655555554 89887754
No 368
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=21.74 E-value=2e+02 Score=19.77 Aligned_cols=44 Identities=7% Similarity=0.061 Sum_probs=21.5
Q ss_pred EEEEcCCCcEEEEECCCCceEEE-ecCCCCCCceEEeCCCeeEEEe
Q 020021 266 VISGSGDGSVYAWSVRSGKEVAS-WMSFDTEPPVIKWTPGSLMFVT 310 (332)
Q Consensus 266 l~sgs~Dg~i~vWd~~~~~~~~~-~~~~~~~v~~l~~sp~~~~l~t 310 (332)
.+.-..||.+.+.|- .++.+-. +.........+.+.++|.+++-
T Consensus 54 ~l~l~~dGNLVl~~~-~~~~~W~S~t~~~~g~~~l~l~~dGnlvl~ 98 (110)
T 3a0c_A 54 RLTLHNNGNLVIYDQ-SNRVIWQTKTNGKEDHYVLVLQQDRNVVIY 98 (110)
T ss_dssp EEEECTTSCEEEECT-TCCEEEECCCCCSSSCCEEEECTTSCEEEE
T ss_pred EEEEeCCCCEEEECC-CCcEEEecCCCCCCCCEEEEEeCCccEEEE
Confidence 344456777777764 3333332 1111122335666677765553
No 369
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=21.21 E-value=2.6e+02 Score=25.88 Aligned_cols=62 Identities=15% Similarity=0.174 Sum_probs=38.7
Q ss_pred CEEEEEcCCCeEEEEEccCC----eEeEEeeecCCCCCcce-EEEECCCCCEEEEEcCCCcEEEEECCC
Q 020021 219 RLMLLTTMEGHIHVLDSFRG----TLLSTYNVKPVSRNSTL-EASFSPEGMFVISGSGDGSVYAWSVRS 282 (332)
Q Consensus 219 ~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~~~~~~-~v~~spdg~~l~sgs~Dg~i~vWd~~~ 282 (332)
+.+..|+.+|+|+-.-+... ..+.++.... ...+|. .+.+++++.+|+.++..+.++| .+..
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~-~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv-pl~~ 480 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFK-DGSPILRDMAFSINQLYLYVMSERQVTRV-PVES 480 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCT-TCCCCCSCCEECTTSSEEEEECSSEEEEE-ESCC
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeec-CCCccccceEEccCCCeEEEEecccccee-ehhh
Confidence 46677889998765544322 2333443322 124553 7889999999999987765555 3443
Done!