Query 020022
Match_columns 332
No_of_seqs 180 out of 1572
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 06:24:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020022.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020022hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK05442 malate dehydrogenase; 100.0 6.8E-73 1.5E-77 524.9 36.2 325 2-330 1-325 (326)
2 TIGR01759 MalateDH-SF1 malate 100.0 6.1E-73 1.3E-77 524.6 35.7 319 3-327 1-323 (323)
3 TIGR01757 Malate-DH_plant mala 100.0 1.5E-71 3.2E-76 522.4 37.2 322 4-331 43-368 (387)
4 COG0039 Mdh Malate/lactate deh 100.0 3.9E-71 8.5E-76 502.7 34.0 307 6-331 1-311 (313)
5 PLN00112 malate dehydrogenase 100.0 5E-70 1.1E-74 519.0 37.0 320 4-331 99-424 (444)
6 cd01338 MDH_choloroplast_like 100.0 1.5E-69 3.2E-74 502.7 35.9 317 4-327 1-320 (322)
7 cd00704 MDH Malate dehydrogena 100.0 3.7E-69 8.1E-74 500.2 33.3 315 6-328 1-323 (323)
8 cd01336 MDH_cytoplasmic_cytoso 100.0 2.5E-68 5.4E-73 495.8 34.9 320 4-328 1-325 (325)
9 TIGR01758 MDH_euk_cyt malate d 100.0 1.4E-67 3E-72 489.9 34.5 317 7-328 1-323 (324)
10 cd05290 LDH_3 A subgroup of L- 100.0 1.7E-67 3.7E-72 485.8 33.5 298 7-324 1-306 (307)
11 KOG1495 Lactate dehydrogenase 100.0 2.3E-67 5E-72 456.0 28.1 299 5-325 20-328 (332)
12 cd05295 MDH_like Malate dehydr 100.0 1.3E-66 2.8E-71 495.2 35.0 320 4-328 122-451 (452)
13 PLN00135 malate dehydrogenase 100.0 4.7E-66 1E-70 474.9 33.4 305 25-332 2-309 (309)
14 PRK00066 ldh L-lactate dehydro 100.0 3.8E-65 8.3E-70 472.9 35.3 306 1-327 2-313 (315)
15 PLN02602 lactate dehydrogenase 100.0 3.7E-65 7.9E-70 476.6 35.0 301 6-327 38-348 (350)
16 TIGR01771 L-LDH-NAD L-lactate 100.0 1.7E-65 3.6E-70 471.7 31.6 293 10-322 1-299 (299)
17 cd05293 LDH_1 A subgroup of L- 100.0 1E-64 2.2E-69 468.7 35.3 302 4-325 2-311 (312)
18 TIGR01756 LDH_protist lactate 100.0 1.9E-64 4.1E-69 465.5 32.7 304 23-331 3-312 (313)
19 cd05291 HicDH_like L-2-hydroxy 100.0 4.3E-63 9.3E-68 459.2 35.0 300 6-325 1-305 (306)
20 cd00300 LDH_like L-lactate deh 100.0 1.5E-62 3.3E-67 453.7 33.6 296 8-324 1-299 (300)
21 KOG1496 Malate dehydrogenase [ 100.0 6.7E-62 1.4E-66 415.3 26.1 330 3-332 2-331 (332)
22 PTZ00117 malate dehydrogenase; 100.0 1.4E-60 3E-65 443.7 36.9 305 4-330 4-317 (319)
23 TIGR01772 MDH_euk_gproteo mala 100.0 6E-61 1.3E-65 442.1 32.0 296 7-332 1-311 (312)
24 PTZ00082 L-lactate dehydrogena 100.0 2.7E-60 5.9E-65 441.2 36.3 304 1-326 1-319 (321)
25 cd01337 MDH_glyoxysomal_mitoch 100.0 1.9E-60 4.2E-65 437.9 31.4 295 6-331 1-310 (310)
26 cd05292 LDH_2 A subgroup of L- 100.0 5.1E-60 1.1E-64 438.4 33.6 300 6-326 1-307 (308)
27 cd05294 LDH-like_MDH_nadp A la 100.0 7.2E-60 1.6E-64 437.1 34.0 303 6-326 1-308 (309)
28 TIGR01763 MalateDH_bact malate 100.0 7.2E-60 1.6E-64 436.0 33.4 297 6-326 2-304 (305)
29 PTZ00325 malate dehydrogenase; 100.0 6.5E-58 1.4E-62 423.1 33.7 299 4-332 7-318 (321)
30 PRK06223 malate dehydrogenase; 100.0 6.2E-57 1.3E-61 418.9 34.3 299 5-327 2-306 (307)
31 cd01339 LDH-like_MDH L-lactate 100.0 9.4E-57 2E-61 416.0 33.7 293 8-324 1-299 (300)
32 PLN00106 malate dehydrogenase 100.0 8.7E-57 1.9E-61 415.9 33.2 292 5-325 18-322 (323)
33 PRK05086 malate dehydrogenase; 100.0 2.2E-56 4.8E-61 413.8 33.1 298 6-332 1-311 (312)
34 cd00650 LDH_MDH_like NAD-depen 100.0 7E-52 1.5E-56 376.7 30.4 258 8-324 1-262 (263)
35 KOG1494 NAD-dependent malate d 100.0 4.6E-48 9.9E-53 337.3 23.1 301 4-331 27-339 (345)
36 PF02866 Ldh_1_C: lactate/mala 100.0 1.7E-36 3.8E-41 258.9 17.9 168 157-331 1-174 (174)
37 PF00056 Ldh_1_N: lactate/mala 100.0 7.6E-33 1.6E-37 227.9 15.6 141 6-155 1-141 (141)
38 cd05197 GH4_glycoside_hydrolas 100.0 5.6E-29 1.2E-33 238.8 30.4 294 6-325 1-389 (425)
39 PRK15076 alpha-galactosidase; 100.0 4.5E-28 9.8E-33 233.4 29.8 292 6-325 2-383 (431)
40 cd05296 GH4_P_beta_glucosidase 100.0 1.9E-27 4.1E-32 227.9 29.9 287 6-318 1-371 (419)
41 cd05298 GH4_GlvA_pagL_like Gly 100.0 2.2E-26 4.7E-31 221.3 31.4 297 6-326 1-393 (437)
42 cd05297 GH4_alpha_glucosidase_ 99.9 7.1E-25 1.5E-29 211.5 30.4 296 6-326 1-387 (423)
43 COG1486 CelF Alpha-galactosida 99.9 7.7E-24 1.7E-28 199.5 23.3 294 4-323 2-393 (442)
44 PF02056 Glyco_hydro_4: Family 99.8 7.2E-18 1.6E-22 143.2 14.9 156 7-174 1-183 (183)
45 PF02737 3HCDH_N: 3-hydroxyacy 99.0 1.7E-09 3.7E-14 92.8 10.4 103 7-136 1-117 (180)
46 PRK07819 3-hydroxybutyryl-CoA 98.9 1.6E-08 3.4E-13 93.1 13.3 113 1-140 1-128 (286)
47 PRK07066 3-hydroxybutyryl-CoA 98.9 4.2E-08 9.2E-13 91.4 15.2 149 5-179 7-182 (321)
48 COG1250 FadB 3-hydroxyacyl-CoA 98.8 2.7E-08 6E-13 91.4 11.4 168 4-200 2-201 (307)
49 COG1004 Ugd Predicted UDP-gluc 98.8 1.2E-07 2.6E-12 88.7 15.4 117 6-142 1-132 (414)
50 KOG1502 Flavonol reductase/cin 98.8 3E-08 6.4E-13 91.3 11.2 171 4-186 5-196 (327)
51 PF03721 UDPG_MGDP_dh_N: UDP-g 98.7 7.4E-08 1.6E-12 82.9 10.4 119 6-144 1-138 (185)
52 KOG2304 3-hydroxyacyl-CoA dehy 98.7 1.8E-08 3.9E-13 86.9 6.3 151 5-183 11-199 (298)
53 PLN02166 dTDP-glucose 4,6-dehy 98.7 1.5E-07 3.3E-12 91.7 13.6 166 3-188 118-297 (436)
54 PRK15181 Vi polysaccharide bio 98.7 1.6E-07 3.4E-12 88.9 12.7 173 4-189 14-200 (348)
55 PRK08293 3-hydroxybutyryl-CoA 98.7 2.3E-07 5E-12 85.5 12.9 107 4-136 2-123 (287)
56 PRK11730 fadB multifunctional 98.7 2.4E-07 5.3E-12 95.4 14.2 156 6-190 314-500 (715)
57 TIGR02440 FadJ fatty oxidation 98.7 3.6E-07 7.9E-12 93.9 14.7 151 5-182 304-486 (699)
58 TIGR02441 fa_ox_alpha_mit fatt 98.6 2.3E-07 5E-12 95.7 12.4 149 5-180 335-514 (737)
59 PRK11154 fadJ multifunctional 98.6 3.6E-07 7.7E-12 94.2 13.6 151 5-182 309-491 (708)
60 PLN02206 UDP-glucuronate decar 98.6 4.5E-07 9.7E-12 88.6 13.4 165 4-188 118-296 (442)
61 PF02719 Polysacc_synt_2: Poly 98.6 4.1E-08 8.8E-13 89.5 4.9 167 8-197 1-183 (293)
62 PLN00198 anthocyanidin reducta 98.6 7.5E-07 1.6E-11 83.8 13.2 174 4-188 8-202 (338)
63 PF01073 3Beta_HSD: 3-beta hyd 98.6 1.6E-07 3.4E-12 86.3 8.4 115 9-135 1-118 (280)
64 PLN02695 GDP-D-mannose-3',5'-e 98.6 3.4E-07 7.4E-12 87.4 10.3 173 3-189 19-202 (370)
65 PLN02650 dihydroflavonol-4-red 98.6 1.1E-06 2.3E-11 83.2 13.5 177 1-188 1-197 (351)
66 TIGR02437 FadB fatty oxidation 98.6 5.9E-07 1.3E-11 92.5 12.5 157 5-190 313-500 (714)
67 PLN02427 UDP-apiose/xylose syn 98.6 4.3E-07 9.2E-12 87.1 10.9 169 4-188 13-216 (386)
68 PRK07530 3-hydroxybutyryl-CoA 98.5 9.3E-07 2E-11 81.7 12.1 107 3-136 2-122 (292)
69 PRK05808 3-hydroxybutyryl-CoA 98.5 1.2E-06 2.7E-11 80.4 12.8 111 5-142 3-127 (282)
70 PRK06035 3-hydroxyacyl-CoA deh 98.5 1.4E-06 3E-11 80.5 12.7 105 5-136 3-124 (291)
71 PF01210 NAD_Gly3P_dh_N: NAD-d 98.5 4.5E-07 9.7E-12 76.0 8.4 97 7-131 1-103 (157)
72 PRK08268 3-hydroxy-acyl-CoA de 98.5 1.3E-06 2.8E-11 86.6 12.4 147 4-177 6-183 (507)
73 TIGR03589 PseB UDP-N-acetylglu 98.5 1.6E-06 3.5E-11 81.3 11.6 172 4-197 3-180 (324)
74 PRK09260 3-hydroxybutyryl-CoA 98.5 2.1E-06 4.5E-11 79.2 12.1 104 6-135 2-119 (288)
75 COG0451 WcaG Nucleoside-diphos 98.5 1.6E-06 3.5E-11 80.0 11.3 167 7-190 2-178 (314)
76 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.4 1.9E-06 4.2E-11 85.2 12.1 148 5-179 5-183 (503)
77 PLN02989 cinnamyl-alcohol dehy 98.4 2.7E-06 5.9E-11 79.4 12.6 177 1-188 1-198 (325)
78 PRK06130 3-hydroxybutyryl-CoA 98.4 3.7E-06 8E-11 78.3 13.4 106 5-136 4-118 (311)
79 COG1087 GalE UDP-glucose 4-epi 98.4 1.4E-06 3.1E-11 78.7 10.0 167 6-188 1-176 (329)
80 TIGR02622 CDP_4_6_dhtase CDP-g 98.4 2.9E-06 6.4E-11 80.2 12.5 173 5-188 4-193 (349)
81 PLN02545 3-hydroxybutyryl-CoA 98.4 2.9E-06 6.2E-11 78.5 12.1 105 5-136 4-122 (295)
82 PLN02572 UDP-sulfoquinovose sy 98.4 2E-06 4.3E-11 84.1 11.4 178 4-189 46-263 (442)
83 COG1086 Predicted nucleoside-d 98.4 2.1E-06 4.5E-11 83.8 11.1 168 5-199 250-433 (588)
84 PRK07531 bifunctional 3-hydrox 98.4 4.8E-06 1E-10 82.5 13.2 107 6-138 5-121 (495)
85 PLN02214 cinnamoyl-CoA reducta 98.4 5.5E-06 1.2E-10 78.2 13.1 170 5-188 10-195 (342)
86 PLN02662 cinnamyl-alcohol dehy 98.4 3.6E-06 7.8E-11 78.3 11.7 174 3-188 2-196 (322)
87 PRK08125 bifunctional UDP-gluc 98.4 2.1E-06 4.5E-11 88.2 10.9 169 4-188 314-497 (660)
88 PLN02896 cinnamyl-alcohol dehy 98.4 5.2E-06 1.1E-10 78.6 12.4 175 5-189 10-211 (353)
89 PRK11908 NAD-dependent epimera 98.3 3.2E-06 6.8E-11 79.9 10.5 166 6-188 2-183 (347)
90 PLN02986 cinnamyl-alcohol dehy 98.3 5.7E-06 1.2E-10 77.2 12.1 175 1-187 1-196 (322)
91 TIGR01915 npdG NADPH-dependent 98.3 9.6E-06 2.1E-10 71.7 12.0 103 6-135 1-105 (219)
92 CHL00194 ycf39 Ycf39; Provisio 98.3 5E-06 1.1E-10 77.6 10.1 109 6-132 1-110 (317)
93 TIGR01472 gmd GDP-mannose 4,6- 98.3 3.8E-06 8.3E-11 79.2 9.2 163 6-177 1-179 (343)
94 TIGR03466 HpnA hopanoid-associ 98.3 7.9E-06 1.7E-10 76.0 11.1 167 6-187 1-174 (328)
95 PLN02353 probable UDP-glucose 98.2 1.6E-05 3.4E-10 78.1 13.2 124 5-137 1-134 (473)
96 PRK11150 rfaD ADP-L-glycero-D- 98.2 1.1E-05 2.3E-10 74.8 11.2 162 8-188 2-174 (308)
97 PRK10217 dTDP-glucose 4,6-dehy 98.2 8.7E-06 1.9E-10 77.0 10.5 172 6-189 2-195 (355)
98 TIGR01181 dTDP_gluc_dehyt dTDP 98.2 1.4E-05 3E-10 73.9 11.6 174 7-188 1-184 (317)
99 PLN02778 3,5-epimerase/4-reduc 98.2 2.1E-05 4.6E-10 72.9 12.4 89 5-121 9-102 (298)
100 PRK10084 dTDP-glucose 4,6 dehy 98.2 8.9E-06 1.9E-10 76.8 10.0 174 6-188 1-201 (352)
101 PRK09987 dTDP-4-dehydrorhamnos 98.2 6.5E-06 1.4E-10 76.3 8.7 156 6-194 1-164 (299)
102 PRK06129 3-hydroxyacyl-CoA deh 98.2 1.5E-05 3.2E-10 74.3 11.0 104 6-135 3-120 (308)
103 TIGR03026 NDP-sugDHase nucleot 98.2 3.5E-05 7.6E-10 74.7 13.9 111 6-136 1-126 (411)
104 PLN02260 probable rhamnose bio 98.2 2.4E-05 5.2E-10 80.5 13.3 173 4-189 5-194 (668)
105 PRK09135 pteridine reductase; 98.1 4E-05 8.6E-10 68.3 12.6 153 4-173 5-175 (249)
106 PLN02240 UDP-glucose 4-epimera 98.1 1.5E-05 3.2E-10 75.2 10.3 175 1-188 1-191 (352)
107 COG0240 GpsA Glycerol-3-phosph 98.1 5.4E-05 1.2E-09 70.0 13.5 110 5-144 1-123 (329)
108 PLN02583 cinnamoyl-CoA reducta 98.1 2.3E-05 4.9E-10 72.5 11.2 176 4-188 5-197 (297)
109 PRK06194 hypothetical protein; 98.1 3.1E-05 6.6E-10 70.9 11.5 161 4-182 5-189 (287)
110 PF03446 NAD_binding_2: NAD bi 98.1 2.8E-05 6.1E-10 65.5 9.7 92 5-131 1-94 (163)
111 COG2085 Predicted dinucleotide 98.1 0.0002 4.4E-09 62.0 14.9 96 5-134 1-96 (211)
112 PLN03209 translocon at the inn 98.1 2.6E-05 5.7E-10 77.5 10.6 117 5-132 80-208 (576)
113 KOG1430 C-3 sterol dehydrogena 98.0 2.1E-05 4.5E-10 74.0 9.0 177 4-190 3-188 (361)
114 PLN02686 cinnamoyl-CoA reducta 98.0 2.5E-05 5.5E-10 74.5 9.5 174 4-188 52-250 (367)
115 PRK08229 2-dehydropantoate 2-r 98.0 3.8E-05 8.2E-10 72.4 10.3 107 5-136 2-112 (341)
116 TIGR01777 yfcH conserved hypot 98.0 2.4E-05 5.3E-10 71.5 8.5 98 8-122 1-102 (292)
117 PRK00094 gpsA NAD(P)H-dependen 98.0 7.1E-05 1.5E-09 69.9 11.7 104 6-135 2-109 (325)
118 PRK15057 UDP-glucose 6-dehydro 98.0 0.00015 3.2E-09 69.6 14.0 120 6-142 1-129 (388)
119 TIGR03376 glycerol3P_DH glycer 98.0 5.3E-05 1.1E-09 71.4 10.7 106 7-131 1-116 (342)
120 PF03807 F420_oxidored: NADP o 98.0 3.7E-05 8E-10 58.5 7.8 94 7-133 1-96 (96)
121 PRK12439 NAD(P)H-dependent gly 98.0 9E-05 2E-09 70.0 11.9 114 4-144 6-129 (341)
122 PF01370 Epimerase: NAD depend 98.0 2.1E-05 4.6E-10 69.4 7.2 166 8-188 1-174 (236)
123 PLN02653 GDP-mannose 4,6-dehyd 98.0 3.2E-05 6.9E-10 72.8 8.8 162 4-175 5-183 (340)
124 PRK10675 UDP-galactose-4-epime 98.0 0.00013 2.7E-09 68.5 12.7 171 6-188 1-184 (338)
125 PRK07231 fabG 3-ketoacyl-(acyl 97.9 8.8E-05 1.9E-09 66.2 11.0 121 1-132 1-141 (251)
126 PRK12921 2-dehydropantoate 2-r 97.9 5.8E-05 1.3E-09 69.9 10.1 107 6-139 1-110 (305)
127 PRK07067 sorbitol dehydrogenas 97.9 0.00018 3.9E-09 64.7 12.9 157 4-180 5-177 (257)
128 PRK07806 short chain dehydroge 97.9 3.8E-05 8.2E-10 68.6 8.4 124 1-132 1-135 (248)
129 PF13460 NAD_binding_10: NADH( 97.9 3.9E-05 8.5E-10 65.3 7.9 97 8-131 1-97 (183)
130 PRK11064 wecC UDP-N-acetyl-D-m 97.9 0.00012 2.7E-09 70.9 11.8 108 5-136 3-125 (415)
131 KOG1429 dTDP-glucose 4-6-dehyd 97.9 2.9E-05 6.2E-10 69.7 6.6 170 4-189 26-205 (350)
132 PRK06180 short chain dehydroge 97.9 0.00026 5.6E-09 64.6 13.0 114 4-132 3-137 (277)
133 PTZ00345 glycerol-3-phosphate 97.9 0.00016 3.4E-09 68.8 11.7 110 4-131 10-129 (365)
134 PRK13394 3-hydroxybutyrate deh 97.9 0.00021 4.6E-09 64.2 12.2 154 5-180 7-181 (262)
135 PRK15182 Vi polysaccharide bio 97.9 0.00032 6.9E-09 68.2 14.0 111 4-136 5-126 (425)
136 PRK05865 hypothetical protein; 97.9 0.00011 2.3E-09 76.7 11.3 105 6-134 1-105 (854)
137 PRK08265 short chain dehydroge 97.9 0.00029 6.2E-09 63.7 12.8 160 1-180 1-174 (261)
138 PRK06249 2-dehydropantoate 2-r 97.9 0.00015 3.3E-09 67.6 11.2 110 1-136 1-111 (313)
139 PRK14620 NAD(P)H-dependent gly 97.8 0.00016 3.5E-09 67.8 11.3 104 6-135 1-110 (326)
140 PRK06522 2-dehydropantoate 2-r 97.8 0.00022 4.7E-09 66.0 12.1 106 6-140 1-109 (304)
141 PRK12936 3-ketoacyl-(acyl-carr 97.8 0.00024 5.1E-09 63.1 11.9 157 4-180 5-176 (245)
142 TIGR01214 rmlD dTDP-4-dehydror 97.8 8.8E-05 1.9E-09 67.8 9.0 96 7-132 1-100 (287)
143 TIGR03325 BphB_TodD cis-2,3-di 97.8 0.00013 2.9E-09 65.8 10.0 39 1-46 1-39 (262)
144 PRK05717 oxidoreductase; Valid 97.8 0.00014 2.9E-09 65.5 9.9 150 6-173 11-176 (255)
145 PLN02725 GDP-4-keto-6-deoxyman 97.8 0.00011 2.3E-09 67.8 9.4 151 9-188 1-164 (306)
146 PRK10538 malonic semialdehyde 97.8 0.00026 5.7E-09 63.4 11.5 153 6-180 1-171 (248)
147 PRK07326 short chain dehydroge 97.8 0.0012 2.6E-08 58.4 15.3 120 3-133 4-141 (237)
148 PRK14618 NAD(P)H-dependent gly 97.8 0.00029 6.3E-09 66.1 11.9 78 1-89 1-82 (328)
149 PRK07523 gluconate 5-dehydroge 97.8 0.00028 6E-09 63.4 11.2 156 5-180 10-183 (255)
150 PRK07825 short chain dehydroge 97.8 0.00036 7.7E-09 63.4 11.8 121 1-133 1-138 (273)
151 PRK05653 fabG 3-ketoacyl-(acyl 97.8 0.00023 5.1E-09 63.0 10.4 121 1-132 1-141 (246)
152 COG4221 Short-chain alcohol de 97.8 0.0011 2.4E-08 58.6 14.3 158 1-180 1-177 (246)
153 PRK06500 short chain dehydroge 97.8 0.00019 4.1E-09 64.0 9.8 153 4-180 5-174 (249)
154 PLN02253 xanthoxin dehydrogena 97.7 0.00048 1E-08 62.8 12.5 150 5-174 18-188 (280)
155 PRK06172 short chain dehydroge 97.7 0.00049 1.1E-08 61.6 12.2 155 4-180 6-181 (253)
156 COG0300 DltE Short-chain dehyd 97.7 0.00028 6.1E-09 63.7 10.4 171 3-197 4-195 (265)
157 PRK12746 short chain dehydroge 97.7 0.00096 2.1E-08 59.7 14.0 155 1-173 1-179 (254)
158 PRK12937 short chain dehydroge 97.7 0.00052 1.1E-08 61.0 12.1 161 1-180 1-177 (245)
159 PRK07856 short chain dehydroge 97.7 0.00043 9.3E-09 62.1 11.6 145 1-173 2-167 (252)
160 PRK08642 fabG 3-ketoacyl-(acyl 97.7 0.00048 1E-08 61.5 11.8 159 1-180 1-183 (253)
161 PRK05875 short chain dehydroge 97.7 0.00042 9.1E-09 63.0 11.5 160 3-182 5-185 (276)
162 PRK06935 2-deoxy-D-gluconate 3 97.7 0.00028 6.1E-09 63.5 10.1 154 4-180 14-187 (258)
163 PRK07201 short chain dehydroge 97.7 0.00017 3.7E-09 73.9 9.6 116 6-131 1-124 (657)
164 PRK07890 short chain dehydroge 97.7 0.00086 1.9E-08 60.1 13.2 123 1-132 1-141 (258)
165 PRK08339 short chain dehydroge 97.7 0.0042 9.2E-08 56.2 17.7 154 5-180 8-181 (263)
166 PRK08278 short chain dehydroge 97.7 0.0012 2.5E-08 60.2 14.1 163 1-180 2-188 (273)
167 PRK14619 NAD(P)H-dependent gly 97.7 0.00031 6.7E-09 65.4 10.4 80 4-132 3-83 (308)
168 PRK06482 short chain dehydroge 97.7 0.00059 1.3E-08 62.0 11.9 143 6-172 3-166 (276)
169 PRK07774 short chain dehydroge 97.7 0.00067 1.5E-08 60.5 11.9 153 4-180 5-179 (250)
170 PRK14982 acyl-ACP reductase; P 97.7 0.00031 6.7E-09 65.9 9.9 96 5-136 155-251 (340)
171 PRK08264 short chain dehydroge 97.7 0.00029 6.2E-09 62.5 9.3 151 1-172 2-164 (238)
172 PRK06128 oxidoreductase; Provi 97.7 0.00093 2E-08 61.7 13.1 153 5-173 55-224 (300)
173 PRK07478 short chain dehydroge 97.7 0.00076 1.7E-08 60.5 12.1 159 1-180 2-181 (254)
174 TIGR02197 heptose_epim ADP-L-g 97.6 0.0003 6.5E-09 65.0 9.7 165 8-188 1-174 (314)
175 PRK06138 short chain dehydroge 97.6 0.00084 1.8E-08 59.9 12.3 150 1-172 1-171 (252)
176 PRK07069 short chain dehydroge 97.6 0.00075 1.6E-08 60.2 11.9 155 7-180 1-177 (251)
177 PRK12320 hypothetical protein; 97.6 0.00021 4.5E-09 73.1 9.0 101 6-131 1-101 (699)
178 PRK07424 bifunctional sterol d 97.6 0.00048 1E-08 66.4 11.0 104 3-119 176-290 (406)
179 COG1748 LYS9 Saccharopine dehy 97.6 0.00045 9.8E-09 65.7 10.6 78 5-92 1-79 (389)
180 PRK07576 short chain dehydroge 97.6 0.00039 8.5E-09 62.9 10.0 151 5-173 9-176 (264)
181 PRK08643 acetoin reductase; Va 97.6 0.0019 4.2E-08 57.8 14.2 154 6-180 3-176 (256)
182 PRK05876 short chain dehydroge 97.6 0.001 2.3E-08 60.7 12.5 122 1-132 1-143 (275)
183 PRK07680 late competence prote 97.6 0.00069 1.5E-08 61.9 11.3 100 6-135 1-100 (273)
184 PRK09072 short chain dehydroge 97.6 0.0013 2.8E-08 59.4 12.9 121 1-132 1-139 (263)
185 PLN02657 3,8-divinyl protochlo 97.6 0.00026 5.7E-09 68.1 8.6 114 4-132 59-182 (390)
186 PRK12826 3-ketoacyl-(acyl-carr 97.6 0.00043 9.3E-09 61.6 9.5 121 1-132 1-142 (251)
187 PRK05565 fabG 3-ketoacyl-(acyl 97.6 0.001 2.2E-08 59.0 11.9 39 1-46 1-40 (247)
188 PRK12429 3-hydroxybutyrate deh 97.6 0.00063 1.4E-08 60.9 10.6 118 4-132 3-140 (258)
189 PRK06200 2,3-dihydroxy-2,3-dih 97.6 0.00048 1E-08 62.2 9.9 149 4-173 5-175 (263)
190 PRK07679 pyrroline-5-carboxyla 97.6 0.00097 2.1E-08 61.2 11.9 72 4-89 2-73 (279)
191 PRK12939 short chain dehydroge 97.6 0.002 4.4E-08 57.2 13.7 119 5-132 7-143 (250)
192 PRK07814 short chain dehydroge 97.6 0.0017 3.7E-08 58.7 13.3 150 4-173 9-179 (263)
193 PRK07666 fabG 3-ketoacyl-(acyl 97.6 0.0013 2.7E-08 58.4 12.1 115 5-134 7-145 (239)
194 PRK05557 fabG 3-ketoacyl-(acyl 97.6 0.001 2.2E-08 58.9 11.6 124 1-132 1-142 (248)
195 TIGR01832 kduD 2-deoxy-D-gluco 97.6 0.0011 2.5E-08 59.0 11.8 157 1-180 1-177 (248)
196 PRK05786 fabG 3-ketoacyl-(acyl 97.5 0.00042 9E-09 61.4 8.8 39 1-46 1-39 (238)
197 PRK06550 fabG 3-ketoacyl-(acyl 97.5 0.0021 4.6E-08 56.7 13.4 150 1-180 1-164 (235)
198 PF01118 Semialdhyde_dh: Semia 97.5 0.00027 5.8E-09 56.4 6.8 74 7-89 1-74 (121)
199 PRK07024 short chain dehydroge 97.5 0.00064 1.4E-08 61.2 10.1 149 5-173 2-170 (257)
200 PRK08085 gluconate 5-dehydroge 97.5 0.00078 1.7E-08 60.4 10.6 120 4-132 8-145 (254)
201 PF04321 RmlD_sub_bind: RmlD s 97.5 9.4E-05 2E-09 68.1 4.6 155 6-194 1-161 (286)
202 PRK08269 3-hydroxybutyryl-CoA 97.5 0.00091 2E-08 62.4 11.2 103 17-142 1-124 (314)
203 PRK07453 protochlorophyllide o 97.5 0.00035 7.5E-09 65.3 8.5 120 4-132 5-145 (322)
204 PRK12384 sorbitol-6-phosphate 97.5 0.0041 8.9E-08 55.8 15.2 119 5-133 2-142 (259)
205 PRK06077 fabG 3-ketoacyl-(acyl 97.5 0.0013 2.8E-08 58.6 11.9 155 2-173 3-173 (252)
206 PRK08267 short chain dehydroge 97.5 0.00037 8E-09 62.8 8.2 117 6-133 2-137 (260)
207 PRK05993 short chain dehydroge 97.5 0.00095 2.1E-08 60.9 11.0 113 5-132 4-135 (277)
208 COG2910 Putative NADH-flavin r 97.5 0.00067 1.4E-08 57.4 9.0 104 6-132 1-105 (211)
209 PRK06124 gluconate 5-dehydroge 97.5 0.00083 1.8E-08 60.2 10.5 119 4-133 10-148 (256)
210 COG1090 Predicted nucleoside-d 97.5 0.0011 2.3E-08 59.8 10.8 104 8-130 1-109 (297)
211 PRK06179 short chain dehydroge 97.5 0.00079 1.7E-08 61.0 10.4 108 4-133 3-133 (270)
212 PRK12828 short chain dehydroge 97.5 0.00044 9.5E-09 61.0 8.5 36 4-46 6-41 (239)
213 PRK06701 short chain dehydroge 97.5 0.0015 3.3E-08 60.1 12.3 120 5-132 46-182 (290)
214 PRK08263 short chain dehydroge 97.5 0.00049 1.1E-08 62.6 9.0 117 5-132 3-136 (275)
215 PRK08655 prephenate dehydrogen 97.5 0.0013 2.7E-08 64.3 12.2 66 6-89 1-66 (437)
216 PRK07060 short chain dehydroge 97.5 0.0007 1.5E-08 60.1 9.7 148 5-172 9-168 (245)
217 PRK08213 gluconate 5-dehydroge 97.5 0.0015 3.3E-08 58.7 12.0 119 4-132 11-149 (259)
218 PRK07502 cyclohexadienyl dehyd 97.5 0.00065 1.4E-08 63.2 9.7 73 1-89 1-74 (307)
219 PRK07102 short chain dehydroge 97.5 0.0031 6.8E-08 56.1 13.8 118 6-132 2-135 (243)
220 PRK07634 pyrroline-5-carboxyla 97.5 0.0015 3.3E-08 58.5 11.7 73 3-89 2-74 (245)
221 PRK12481 2-deoxy-D-gluconate 3 97.5 0.00077 1.7E-08 60.6 9.7 154 4-180 7-180 (251)
222 PRK06398 aldose dehydrogenase; 97.5 0.0019 4.1E-08 58.2 12.3 148 4-173 5-163 (258)
223 PRK07417 arogenate dehydrogena 97.5 0.00059 1.3E-08 62.6 9.1 65 6-89 1-65 (279)
224 PRK08945 putative oxoacyl-(acy 97.5 0.0058 1.3E-07 54.4 15.3 117 5-132 12-152 (247)
225 PRK12829 short chain dehydroge 97.5 0.0025 5.4E-08 57.3 12.8 36 4-46 10-45 (264)
226 PRK11880 pyrroline-5-carboxyla 97.5 0.0011 2.3E-08 60.4 10.4 69 5-89 2-70 (267)
227 PRK06101 short chain dehydroge 97.5 0.0019 4.2E-08 57.4 12.0 149 6-173 2-160 (240)
228 PRK12742 oxidoreductase; Provi 97.5 0.0029 6.2E-08 55.9 13.0 160 1-180 1-170 (237)
229 PRK12935 acetoacetyl-CoA reduc 97.5 0.0024 5.1E-08 56.9 12.5 124 1-132 1-143 (247)
230 PRK12747 short chain dehydroge 97.5 0.0065 1.4E-07 54.3 15.4 158 4-180 3-182 (252)
231 PRK12745 3-ketoacyl-(acyl-carr 97.4 0.0019 4.1E-08 57.8 11.9 34 6-46 3-36 (256)
232 PRK08628 short chain dehydroge 97.4 0.0025 5.4E-08 57.2 12.6 121 2-132 4-140 (258)
233 PRK06171 sorbitol-6-phosphate 97.4 0.00073 1.6E-08 61.0 9.2 154 3-180 7-182 (266)
234 PRK07063 short chain dehydroge 97.4 0.002 4.3E-08 58.0 11.9 154 5-180 7-182 (260)
235 PRK06182 short chain dehydroge 97.4 0.00062 1.3E-08 61.9 8.6 114 4-132 2-133 (273)
236 PRK12744 short chain dehydroge 97.4 0.0066 1.4E-07 54.5 15.2 157 5-180 8-183 (257)
237 PLN02260 probable rhamnose bio 97.4 0.0013 2.9E-08 67.7 11.8 95 4-131 379-480 (668)
238 PRK11559 garR tartronate semia 97.4 0.00095 2.1E-08 61.6 9.8 65 5-89 2-66 (296)
239 PRK06914 short chain dehydroge 97.4 0.0056 1.2E-07 55.6 14.8 35 5-46 3-37 (280)
240 PLN02688 pyrroline-5-carboxyla 97.4 0.0019 4E-08 58.7 11.4 68 6-89 1-69 (266)
241 PRK08340 glucose-1-dehydrogena 97.4 0.0022 4.8E-08 57.7 11.8 154 6-180 1-175 (259)
242 PRK06196 oxidoreductase; Provi 97.4 0.0014 3.1E-08 60.9 10.7 157 5-173 26-200 (315)
243 PRK07985 oxidoreductase; Provi 97.4 0.0047 1E-07 57.0 14.1 151 6-173 50-218 (294)
244 PRK05866 short chain dehydroge 97.4 0.0012 2.5E-08 61.0 10.0 118 4-132 39-178 (293)
245 COG1893 ApbA Ketopantoate redu 97.4 0.0013 2.9E-08 61.1 10.3 125 6-159 1-126 (307)
246 PRK06924 short chain dehydroge 97.4 0.0013 2.8E-08 58.7 10.0 34 6-46 2-35 (251)
247 PRK08277 D-mannonate oxidoredu 97.4 0.0036 7.8E-08 56.9 13.1 35 5-46 10-44 (278)
248 PRK06197 short chain dehydroge 97.4 0.0011 2.3E-08 61.5 9.6 156 5-173 16-197 (306)
249 KOG1205 Predicted dehydrogenas 97.4 0.0045 9.6E-08 56.5 13.2 156 4-180 11-189 (282)
250 COG1091 RfbD dTDP-4-dehydrorha 97.4 0.00077 1.7E-08 61.4 8.3 151 6-193 1-159 (281)
251 PRK07109 short chain dehydroge 97.4 0.0096 2.1E-07 56.0 16.1 116 5-132 8-144 (334)
252 PRK08226 short chain dehydroge 97.4 0.0016 3.6E-08 58.5 10.4 39 1-46 1-40 (263)
253 PRK07454 short chain dehydroge 97.4 0.0011 2.3E-08 59.0 9.0 121 1-133 1-143 (241)
254 PTZ00142 6-phosphogluconate de 97.4 0.0015 3.2E-08 64.3 10.7 98 6-132 2-102 (470)
255 PRK08219 short chain dehydroge 97.4 0.00099 2.1E-08 58.4 8.7 115 4-132 2-129 (227)
256 PRK06928 pyrroline-5-carboxyla 97.3 0.0023 5E-08 58.7 11.3 101 6-135 2-102 (277)
257 PRK07097 gluconate 5-dehydroge 97.3 0.003 6.5E-08 57.0 12.0 150 4-173 9-178 (265)
258 COG1088 RfbB dTDP-D-glucose 4, 97.3 0.002 4.4E-08 58.5 10.4 170 6-186 1-184 (340)
259 PRK08993 2-deoxy-D-gluconate 3 97.3 0.0033 7.2E-08 56.4 12.1 154 4-180 9-182 (253)
260 PRK12491 pyrroline-5-carboxyla 97.3 0.0029 6.2E-08 57.9 11.7 69 6-89 3-71 (272)
261 PLN00141 Tic62-NAD(P)-related 97.3 0.00059 1.3E-08 61.4 7.0 112 4-131 16-131 (251)
262 PF10727 Rossmann-like: Rossma 97.3 0.0013 2.9E-08 52.8 8.3 102 5-141 10-116 (127)
263 PRK05884 short chain dehydroge 97.3 0.0031 6.7E-08 55.7 11.5 34 6-46 1-34 (223)
264 PRK07832 short chain dehydroge 97.3 0.014 2.9E-07 53.0 16.0 154 6-180 1-175 (272)
265 TIGR01963 PHB_DH 3-hydroxybuty 97.3 0.0029 6.3E-08 56.4 11.4 116 6-132 2-137 (255)
266 PRK12825 fabG 3-ketoacyl-(acyl 97.3 0.0019 4.1E-08 57.1 10.0 30 1-30 1-31 (249)
267 TIGR01505 tartro_sem_red 2-hyd 97.3 0.0013 2.7E-08 60.7 9.1 63 7-89 1-63 (291)
268 PRK12827 short chain dehydroge 97.3 0.0062 1.3E-07 54.0 13.3 117 4-133 5-148 (249)
269 PRK08220 2,3-dihydroxybenzoate 97.3 0.0027 5.8E-08 56.7 10.9 35 4-45 7-41 (252)
270 PRK12823 benD 1,6-dihydroxycyc 97.3 0.0014 3.1E-08 58.9 9.1 146 5-173 8-174 (260)
271 PRK06113 7-alpha-hydroxysteroi 97.3 0.0051 1.1E-07 55.2 12.7 157 4-180 10-183 (255)
272 TIGR00872 gnd_rel 6-phosphoglu 97.3 0.0026 5.5E-08 59.0 10.7 95 6-133 1-95 (298)
273 TIGR01179 galE UDP-glucose-4-e 97.3 0.001 2.3E-08 61.5 8.2 167 7-188 1-180 (328)
274 PRK05867 short chain dehydroge 97.3 0.0029 6.3E-08 56.7 10.7 157 4-180 8-185 (253)
275 COG2084 MmsB 3-hydroxyisobutyr 97.2 0.0018 4E-08 59.2 9.3 64 6-89 1-65 (286)
276 PRK06841 short chain dehydroge 97.2 0.0034 7.4E-08 56.1 11.1 119 4-132 14-148 (255)
277 PRK07035 short chain dehydroge 97.2 0.0095 2.1E-07 53.2 13.8 37 3-46 6-42 (252)
278 PRK09134 short chain dehydroge 97.2 0.0014 3.1E-08 58.9 8.5 119 4-131 8-145 (258)
279 PRK15461 NADH-dependent gamma- 97.2 0.002 4.4E-08 59.6 9.6 64 6-89 2-65 (296)
280 PRK05708 2-dehydropantoate 2-r 97.2 0.004 8.6E-08 57.9 11.6 120 5-156 2-125 (305)
281 TIGR03206 benzo_BadH 2-hydroxy 97.2 0.0024 5.3E-08 56.8 9.9 117 5-132 3-139 (250)
282 PRK06198 short chain dehydroge 97.2 0.018 3.8E-07 51.6 15.6 39 1-46 1-41 (260)
283 PF01113 DapB_N: Dihydrodipico 97.2 0.0039 8.6E-08 49.9 10.0 73 6-88 1-74 (124)
284 PRK08589 short chain dehydroge 97.2 0.003 6.5E-08 57.4 10.5 156 1-180 1-178 (272)
285 PRK12480 D-lactate dehydrogena 97.2 0.0022 4.7E-08 60.3 9.7 90 5-132 146-235 (330)
286 TIGR03649 ergot_EASG ergot alk 97.2 0.0016 3.4E-08 59.6 8.6 94 7-131 1-104 (285)
287 PRK09291 short chain dehydroge 97.2 0.004 8.6E-08 55.7 11.1 116 6-132 3-132 (257)
288 PRK09242 tropinone reductase; 97.2 0.003 6.5E-08 56.7 10.2 153 4-180 8-184 (257)
289 PRK07578 short chain dehydroge 97.2 0.0059 1.3E-07 52.6 11.7 105 6-131 1-111 (199)
290 PRK08703 short chain dehydroge 97.2 0.018 3.9E-07 51.0 15.1 154 1-174 1-180 (239)
291 PRK08217 fabG 3-ketoacyl-(acyl 97.2 0.0044 9.5E-08 55.1 11.1 39 1-46 1-39 (253)
292 PRK06139 short chain dehydroge 97.2 0.0052 1.1E-07 57.8 11.9 150 4-173 6-175 (330)
293 KOG2711 Glycerol-3-phosphate d 97.2 0.0089 1.9E-07 55.3 12.9 109 3-131 19-139 (372)
294 PRK06181 short chain dehydroge 97.2 0.0056 1.2E-07 55.1 11.7 118 6-133 2-138 (263)
295 PLN02996 fatty acyl-CoA reduct 97.2 0.0069 1.5E-07 60.1 13.1 111 4-120 10-150 (491)
296 TIGR01830 3oxo_ACP_reduc 3-oxo 97.1 0.0038 8.3E-08 55.0 10.0 118 8-133 1-136 (239)
297 PRK07074 short chain dehydroge 97.1 0.0062 1.3E-07 54.6 11.4 147 6-173 3-167 (257)
298 PRK09009 C factor cell-cell si 97.1 0.0066 1.4E-07 53.6 11.4 154 6-180 1-174 (235)
299 COG0677 WecC UDP-N-acetyl-D-ma 97.1 0.0087 1.9E-07 56.6 12.4 115 5-136 9-134 (436)
300 PRK05650 short chain dehydroge 97.1 0.0033 7.2E-08 56.9 9.7 115 6-132 1-136 (270)
301 PRK12490 6-phosphogluconate de 97.1 0.0034 7.4E-08 58.2 9.9 64 6-89 1-67 (299)
302 PRK09186 flagellin modificatio 97.1 0.0031 6.7E-08 56.4 9.4 163 4-180 3-192 (256)
303 KOG1371 UDP-glucose 4-epimeras 97.1 0.0026 5.6E-08 58.5 8.7 169 5-186 2-185 (343)
304 PRK06114 short chain dehydroge 97.1 0.0029 6.3E-08 56.8 9.1 118 4-132 7-145 (254)
305 PRK06947 glucose-1-dehydrogena 97.1 0.03 6.5E-07 49.8 15.6 156 5-180 2-181 (248)
306 TIGR01746 Thioester-redct thio 97.1 0.0079 1.7E-07 56.4 12.5 117 7-131 1-135 (367)
307 PRK12549 shikimate 5-dehydroge 97.1 0.0028 6.1E-08 58.3 9.0 77 5-92 127-205 (284)
308 PRK08415 enoyl-(acyl carrier p 97.1 0.0037 8E-08 57.1 9.8 157 1-180 1-181 (274)
309 PRK06125 short chain dehydroge 97.1 0.015 3.3E-07 52.2 13.7 118 4-132 6-140 (259)
310 TIGR02632 RhaD_aldol-ADH rhamn 97.1 0.0059 1.3E-07 63.0 12.3 150 5-173 414-585 (676)
311 PRK06057 short chain dehydroge 97.1 0.0031 6.6E-08 56.6 9.1 36 4-46 6-41 (255)
312 PF02558 ApbA: Ketopantoate re 97.1 0.0017 3.7E-08 53.5 6.9 116 8-158 1-125 (151)
313 PRK06523 short chain dehydroge 97.1 0.0021 4.6E-08 57.7 8.0 151 5-180 9-176 (260)
314 TIGR02415 23BDH acetoin reduct 97.1 0.017 3.6E-07 51.6 13.7 116 6-132 1-137 (254)
315 PRK06123 short chain dehydroge 97.1 0.0051 1.1E-07 54.7 10.3 156 6-180 3-181 (248)
316 PRK08177 short chain dehydroge 97.1 0.0039 8.4E-08 54.9 9.4 34 6-46 2-35 (225)
317 PRK08416 7-alpha-hydroxysteroi 97.1 0.028 6E-07 50.6 15.1 156 4-180 7-189 (260)
318 PRK05693 short chain dehydroge 97.0 0.021 4.6E-07 51.7 14.3 34 6-46 2-35 (274)
319 PRK07577 short chain dehydroge 97.0 0.0029 6.3E-08 55.8 8.3 36 4-46 2-37 (234)
320 PRK12367 short chain dehydroge 97.0 0.0048 1E-07 55.4 9.8 99 5-116 14-117 (245)
321 PF01488 Shikimate_DH: Shikima 97.0 0.0029 6.2E-08 51.5 7.5 76 4-92 11-86 (135)
322 PRK05855 short chain dehydroge 97.0 0.0067 1.5E-07 60.9 11.8 156 4-180 314-489 (582)
323 PLN02780 ketoreductase/ oxidor 97.0 0.0052 1.1E-07 57.5 10.3 156 5-180 53-232 (320)
324 PRK06463 fabG 3-ketoacyl-(acyl 97.0 0.0032 7E-08 56.5 8.6 156 1-180 1-176 (255)
325 PRK08251 short chain dehydroge 97.0 0.014 3.1E-07 51.9 12.7 117 5-132 2-140 (248)
326 PRK08063 enoyl-(acyl carrier p 97.0 0.0098 2.1E-07 52.9 11.6 27 4-30 3-29 (250)
327 PRK06484 short chain dehydroge 97.0 0.0067 1.4E-07 60.4 11.6 156 5-180 269-438 (520)
328 PRK09599 6-phosphogluconate de 97.0 0.005 1.1E-07 57.1 9.9 64 6-89 1-67 (301)
329 PRK06484 short chain dehydroge 97.0 0.0047 1E-07 61.6 10.2 122 1-132 1-141 (520)
330 PRK07023 short chain dehydroge 97.0 0.0026 5.6E-08 56.6 7.6 34 6-46 2-35 (243)
331 PRK07775 short chain dehydroge 96.9 0.0081 1.8E-07 54.6 10.7 35 5-46 10-44 (274)
332 PLN02350 phosphogluconate dehy 96.9 0.0051 1.1E-07 60.8 9.8 72 4-89 5-80 (493)
333 PRK07904 short chain dehydroge 96.9 0.013 2.8E-07 52.7 11.8 120 4-132 7-146 (253)
334 PRK06545 prephenate dehydrogen 96.9 0.0064 1.4E-07 57.9 10.1 68 6-89 1-68 (359)
335 PRK06949 short chain dehydroge 96.9 0.018 4E-07 51.4 12.7 35 5-46 9-43 (258)
336 PRK12938 acetyacetyl-CoA reduc 96.9 0.014 3E-07 51.9 11.7 26 5-30 3-28 (246)
337 PRK08936 glucose-1-dehydrogena 96.9 0.057 1.2E-06 48.5 15.9 156 4-180 6-182 (261)
338 PLN00016 RNA-binding protein; 96.9 0.0045 9.7E-08 59.2 9.0 36 4-46 51-90 (378)
339 TIGR02685 pter_reduc_Leis pter 96.9 0.048 1E-06 49.2 15.3 32 6-44 2-33 (267)
340 PRK08324 short chain dehydroge 96.9 0.0083 1.8E-07 62.0 11.4 117 6-132 423-558 (681)
341 PRK07062 short chain dehydroge 96.9 0.055 1.2E-06 48.7 15.5 117 5-132 8-146 (265)
342 KOG2305 3-hydroxyacyl-CoA dehy 96.9 0.0035 7.6E-08 54.8 7.1 109 5-139 3-126 (313)
343 PRK07792 fabG 3-ketoacyl-(acyl 96.9 0.0086 1.9E-07 55.5 10.3 36 4-46 11-46 (306)
344 PRK11199 tyrA bifunctional cho 96.9 0.0061 1.3E-07 58.4 9.4 53 5-89 98-150 (374)
345 PRK12743 oxidoreductase; Provi 96.9 0.071 1.5E-06 47.7 15.9 118 5-132 2-140 (256)
346 PRK06483 dihydromonapterin red 96.8 0.019 4.2E-07 50.7 12.0 148 5-173 2-167 (236)
347 PRK12824 acetoacetyl-CoA reduc 96.8 0.005 1.1E-07 54.5 8.2 35 5-46 2-36 (245)
348 PRK05872 short chain dehydroge 96.8 0.017 3.7E-07 53.2 11.9 119 5-132 9-143 (296)
349 PRK07370 enoyl-(acyl carrier p 96.8 0.013 2.9E-07 52.8 11.0 155 4-180 5-185 (258)
350 PRK07889 enoyl-(acyl carrier p 96.8 0.01 2.2E-07 53.5 10.2 35 5-46 7-43 (256)
351 PRK05854 short chain dehydroge 96.8 0.032 6.9E-07 51.9 13.8 162 5-180 14-201 (313)
352 PRK08862 short chain dehydroge 96.8 0.034 7.5E-07 49.2 13.4 121 1-132 1-144 (227)
353 PF07993 NAD_binding_4: Male s 96.8 0.0014 2.9E-08 59.1 4.3 168 10-186 1-200 (249)
354 TIGR02354 thiF_fam2 thiamine b 96.8 0.012 2.5E-07 51.4 9.8 34 5-45 21-54 (200)
355 PLN02256 arogenate dehydrogena 96.8 0.015 3.2E-07 54.1 11.1 65 4-89 35-100 (304)
356 cd05213 NAD_bind_Glutamyl_tRNA 96.8 0.0093 2E-07 55.6 9.8 102 4-136 177-278 (311)
357 PF05368 NmrA: NmrA-like famil 96.8 0.008 1.7E-07 53.2 9.0 94 8-122 1-95 (233)
358 PRK06079 enoyl-(acyl carrier p 96.8 0.0079 1.7E-07 54.0 9.0 38 1-45 1-42 (252)
359 PRK08507 prephenate dehydrogen 96.8 0.012 2.6E-07 53.8 10.2 66 6-89 1-66 (275)
360 PRK08261 fabG 3-ketoacyl-(acyl 96.7 0.013 2.8E-07 57.4 10.9 117 5-132 210-343 (450)
361 PTZ00431 pyrroline carboxylate 96.7 0.014 3.1E-07 52.9 10.4 63 4-88 2-64 (260)
362 PRK07677 short chain dehydroge 96.7 0.044 9.4E-07 49.0 13.5 148 6-173 2-170 (252)
363 PRK13302 putative L-aspartate 96.7 0.0049 1.1E-07 56.3 7.2 74 1-90 1-76 (271)
364 PRK07533 enoyl-(acyl carrier p 96.7 0.018 3.9E-07 51.8 11.0 36 4-46 9-46 (258)
365 PRK15059 tartronate semialdehy 96.7 0.0085 1.8E-07 55.4 8.8 63 6-89 1-63 (292)
366 PLN02503 fatty acyl-CoA reduct 96.7 0.011 2.4E-07 59.9 10.0 111 5-121 119-258 (605)
367 PRK05599 hypothetical protein; 96.7 0.082 1.8E-06 47.2 14.8 153 6-180 1-174 (246)
368 PRK06940 short chain dehydroge 96.7 0.027 5.9E-07 51.3 11.8 115 7-133 4-127 (275)
369 cd01065 NAD_bind_Shikimate_DH 96.7 0.011 2.4E-07 48.7 8.6 76 4-93 18-93 (155)
370 cd01078 NAD_bind_H4MPT_DH NADP 96.7 0.0085 1.9E-07 51.7 8.1 76 4-91 27-107 (194)
371 COG0289 DapB Dihydrodipicolina 96.6 0.023 5.1E-07 50.9 10.7 75 5-88 2-76 (266)
372 PRK07984 enoyl-(acyl carrier p 96.6 0.015 3.3E-07 52.6 9.9 159 1-180 1-183 (262)
373 PRK06953 short chain dehydroge 96.6 0.019 4.2E-07 50.3 10.2 114 6-132 2-130 (222)
374 COG0287 TyrA Prephenate dehydr 96.6 0.024 5.3E-07 51.9 10.9 69 4-89 2-72 (279)
375 PRK07831 short chain dehydroge 96.6 0.058 1.2E-06 48.5 13.3 153 5-180 17-194 (262)
376 PRK06720 hypothetical protein; 96.6 0.044 9.6E-07 46.3 11.5 36 4-46 15-50 (169)
377 PF00106 adh_short: short chai 96.5 0.048 1E-06 45.2 11.5 121 6-135 1-138 (167)
378 PRK05479 ketol-acid reductoiso 96.5 0.017 3.7E-07 54.0 9.5 65 5-89 17-81 (330)
379 PRK12748 3-ketoacyl-(acyl-carr 96.5 0.012 2.5E-07 52.8 8.3 38 1-45 1-40 (256)
380 PRK07574 formate dehydrogenase 96.5 0.018 4E-07 55.1 9.9 66 5-90 192-257 (385)
381 PF11975 Glyco_hydro_4C: Famil 96.5 0.017 3.7E-07 51.5 9.1 72 250-327 141-214 (232)
382 cd05312 NAD_bind_1_malic_enz N 96.5 0.0067 1.4E-07 55.2 6.5 119 6-144 26-156 (279)
383 TIGR02371 ala_DH_arch alanine 96.5 0.015 3.3E-07 54.5 9.2 74 4-89 127-200 (325)
384 PRK06728 aspartate-semialdehyd 96.5 0.0091 2E-07 56.3 7.5 76 1-90 1-77 (347)
385 KOG1201 Hydroxysteroid 17-beta 96.5 0.11 2.4E-06 47.5 14.1 116 6-132 39-173 (300)
386 TIGR00873 gnd 6-phosphoglucona 96.5 0.0086 1.9E-07 58.9 7.4 100 7-136 1-105 (467)
387 TIGR01831 fabG_rel 3-oxoacyl-( 96.5 0.02 4.3E-07 50.6 9.3 118 8-134 1-138 (239)
388 PF02826 2-Hacid_dh_C: D-isome 96.4 0.016 3.5E-07 49.4 8.3 93 5-133 36-129 (178)
389 PRK07201 short chain dehydroge 96.4 0.03 6.5E-07 57.4 11.7 117 5-132 371-509 (657)
390 TIGR01829 AcAcCoA_reduct aceto 96.4 0.13 2.9E-06 45.2 14.3 118 6-133 1-138 (242)
391 PRK07791 short chain dehydroge 96.4 0.031 6.6E-07 51.3 10.4 38 1-45 1-39 (286)
392 PRK06505 enoyl-(acyl carrier p 96.4 0.16 3.5E-06 46.1 15.0 151 5-180 7-183 (271)
393 PRK13243 glyoxylate reductase; 96.4 0.014 2.9E-07 55.1 8.1 64 5-90 150-213 (333)
394 PRK08594 enoyl-(acyl carrier p 96.4 0.066 1.4E-06 48.2 12.3 159 4-180 6-185 (257)
395 PRK06407 ornithine cyclodeamin 96.3 0.019 4E-07 53.3 8.6 75 4-89 116-190 (301)
396 cd01487 E1_ThiF_like E1_ThiF_l 96.3 0.037 8.1E-07 47.0 9.8 33 7-46 1-33 (174)
397 PRK15469 ghrA bifunctional gly 96.3 0.019 4.1E-07 53.6 8.6 92 5-132 136-227 (312)
398 PF03949 Malic_M: Malic enzyme 96.3 0.0033 7.1E-08 56.5 3.4 120 6-144 26-157 (255)
399 PLN02712 arogenate dehydrogena 96.3 0.035 7.7E-07 57.1 11.3 64 5-89 52-116 (667)
400 KOG2666 UDP-glucose/GDP-mannos 96.3 0.017 3.6E-07 53.0 7.7 82 5-94 1-91 (481)
401 PF02423 OCD_Mu_crystall: Orni 96.3 0.02 4.3E-07 53.5 8.5 73 4-88 127-199 (313)
402 PRK08605 D-lactate dehydrogena 96.3 0.0097 2.1E-07 56.0 6.5 64 5-90 146-209 (332)
403 PRK08159 enoyl-(acyl carrier p 96.3 0.25 5.4E-06 44.9 15.6 157 5-180 10-186 (272)
404 TIGR01289 LPOR light-dependent 96.2 0.028 6.1E-07 52.3 9.4 119 5-132 3-143 (314)
405 TIGR01724 hmd_rel H2-forming N 96.2 0.071 1.5E-06 49.4 11.6 107 6-143 1-129 (341)
406 PRK06476 pyrroline-5-carboxyla 96.2 0.011 2.4E-07 53.4 6.5 69 6-89 1-69 (258)
407 PRK06603 enoyl-(acyl carrier p 96.2 0.084 1.8E-06 47.6 12.2 155 5-180 8-184 (260)
408 PLN02968 Probable N-acetyl-gam 96.2 0.013 2.8E-07 56.1 7.1 36 4-45 37-72 (381)
409 PRK08291 ectoine utilization p 96.2 0.026 5.7E-07 53.1 9.1 74 5-90 132-206 (330)
410 PRK08303 short chain dehydroge 96.2 0.076 1.6E-06 49.3 12.1 159 5-180 8-199 (305)
411 PRK05671 aspartate-semialdehyd 96.2 0.012 2.6E-07 55.4 6.7 75 1-90 1-75 (336)
412 COG0569 TrkA K+ transport syst 96.2 0.0059 1.3E-07 54.2 4.2 70 6-90 1-75 (225)
413 PLN03139 formate dehydrogenase 96.2 0.035 7.5E-07 53.2 9.6 93 5-131 199-291 (386)
414 COG1712 Predicted dinucleotide 96.2 0.043 9.3E-07 48.1 9.2 90 6-128 1-90 (255)
415 PRK06141 ornithine cyclodeamin 96.2 0.03 6.5E-07 52.3 9.1 73 4-89 124-197 (314)
416 TIGR01500 sepiapter_red sepiap 96.2 0.046 9.9E-07 49.0 10.0 44 7-59 2-49 (256)
417 PRK08300 acetaldehyde dehydrog 96.1 0.18 3.9E-06 46.7 13.8 38 3-46 2-39 (302)
418 PRK08017 oxidoreductase; Provi 96.1 0.23 4.9E-06 44.2 14.5 34 6-46 3-36 (256)
419 TIGR01692 HIBADH 3-hydroxyisob 96.1 0.024 5.2E-07 52.2 8.3 60 10-89 1-60 (288)
420 PRK07589 ornithine cyclodeamin 96.1 0.029 6.3E-07 53.0 8.9 73 5-89 129-201 (346)
421 PRK07340 ornithine cyclodeamin 96.1 0.021 4.6E-07 53.0 7.9 73 4-90 124-197 (304)
422 TIGR01035 hemA glutamyl-tRNA r 96.1 0.02 4.3E-07 55.7 7.8 72 5-92 180-251 (417)
423 PF03435 Saccharop_dh: Sacchar 96.1 0.0037 8.1E-08 60.0 2.8 74 8-92 1-78 (386)
424 PRK08618 ornithine cyclodeamin 96.1 0.029 6.3E-07 52.6 8.5 74 5-89 127-200 (325)
425 PRK08690 enoyl-(acyl carrier p 96.1 0.32 7E-06 43.8 15.2 156 1-180 1-184 (261)
426 cd00762 NAD_bind_malic_enz NAD 96.0 0.019 4E-07 51.6 6.7 120 6-144 26-157 (254)
427 PRK06718 precorrin-2 dehydroge 96.0 0.045 9.8E-07 47.7 9.1 71 4-90 9-79 (202)
428 PRK07041 short chain dehydroge 96.0 0.022 4.8E-07 50.0 7.2 112 9-131 1-123 (230)
429 PLN02928 oxidoreductase family 96.0 0.022 4.8E-07 53.9 7.6 104 5-132 159-263 (347)
430 COG3967 DltE Short-chain dehyd 96.0 0.16 3.6E-06 44.0 11.9 120 1-132 1-139 (245)
431 TIGR02356 adenyl_thiF thiazole 96.0 0.034 7.3E-07 48.5 8.0 34 5-45 21-54 (202)
432 PRK06823 ornithine cyclodeamin 96.0 0.043 9.4E-07 51.2 9.2 74 4-89 127-200 (315)
433 PRK12859 3-ketoacyl-(acyl-carr 96.0 0.15 3.2E-06 45.8 12.4 36 1-43 1-39 (256)
434 PRK08644 thiamine biosynthesis 96.0 0.073 1.6E-06 46.8 10.1 34 5-45 28-61 (212)
435 PRK06997 enoyl-(acyl carrier p 95.9 0.12 2.7E-06 46.5 11.9 157 1-180 1-183 (260)
436 PRK07688 thiamine/molybdopteri 95.9 0.05 1.1E-06 51.4 9.5 35 5-46 24-58 (339)
437 COG0345 ProC Pyrroline-5-carbo 95.9 0.026 5.7E-07 51.1 7.3 95 5-131 1-95 (266)
438 PLN02712 arogenate dehydrogena 95.9 0.085 1.8E-06 54.3 11.8 65 4-89 368-433 (667)
439 PRK08664 aspartate-semialdehyd 95.9 0.026 5.7E-07 53.5 7.6 35 4-44 2-36 (349)
440 PRK08306 dipicolinate synthase 95.9 0.034 7.5E-07 51.4 8.2 67 5-89 152-218 (296)
441 TIGR02992 ectoine_eutC ectoine 95.9 0.041 9E-07 51.6 8.8 73 5-89 129-202 (326)
442 TIGR01745 asd_gamma aspartate- 95.9 0.067 1.5E-06 50.7 10.1 72 6-90 1-73 (366)
443 TIGR02853 spore_dpaA dipicolin 95.9 0.033 7.2E-07 51.3 7.9 67 5-89 151-217 (287)
444 PRK12475 thiamine/molybdopteri 95.8 0.075 1.6E-06 50.2 10.2 35 5-46 24-58 (338)
445 PRK00048 dihydrodipicolinate r 95.8 0.027 5.8E-07 51.0 6.9 67 5-89 1-68 (257)
446 PRK14806 bifunctional cyclohex 95.8 0.054 1.2E-06 56.6 9.9 94 6-131 4-97 (735)
447 PRK14106 murD UDP-N-acetylmura 95.8 0.093 2E-06 51.4 11.1 104 1-118 1-104 (450)
448 smart00822 PKS_KR This enzymat 95.8 0.1 2.2E-06 43.0 9.9 117 6-132 1-136 (180)
449 PRK14874 aspartate-semialdehyd 95.8 0.024 5.3E-07 53.4 6.6 72 5-90 1-72 (334)
450 PRK00045 hemA glutamyl-tRNA re 95.7 0.048 1E-06 53.1 8.8 105 4-136 181-285 (423)
451 PRK09730 putative NAD(P)-bindi 95.7 0.05 1.1E-06 48.1 8.2 25 6-30 2-26 (247)
452 PRK00436 argC N-acetyl-gamma-g 95.7 0.034 7.3E-07 52.6 7.3 24 5-28 2-25 (343)
453 PRK08040 putative semialdehyde 95.7 0.039 8.4E-07 51.9 7.5 75 2-90 1-75 (336)
454 PLN02858 fructose-bisphosphate 95.7 0.068 1.5E-06 59.3 10.4 70 1-90 319-389 (1378)
455 PLN02383 aspartate semialdehyd 95.6 0.043 9.3E-07 51.9 7.8 74 4-91 6-79 (344)
456 cd05311 NAD_bind_2_malic_enz N 95.6 0.1 2.2E-06 46.3 9.8 77 5-90 25-106 (226)
457 PRK05476 S-adenosyl-L-homocyst 95.6 0.067 1.5E-06 51.9 9.1 65 5-90 212-276 (425)
458 PRK06199 ornithine cyclodeamin 95.6 0.069 1.5E-06 51.2 9.1 77 4-89 154-231 (379)
459 KOG0409 Predicted dehydrogenas 95.6 0.035 7.7E-07 50.7 6.6 68 5-92 35-102 (327)
460 cd01483 E1_enzyme_family Super 95.6 0.14 2.9E-06 41.8 9.7 32 7-45 1-32 (143)
461 TIGR00465 ilvC ketol-acid redu 95.6 0.12 2.6E-06 48.2 10.4 65 5-89 3-67 (314)
462 PRK13304 L-aspartate dehydroge 95.6 0.05 1.1E-06 49.5 7.7 68 6-90 2-70 (265)
463 PRK12557 H(2)-dependent methyl 95.6 0.15 3.3E-06 48.1 11.1 57 18-89 32-89 (342)
464 TIGR00936 ahcY adenosylhomocys 95.5 0.074 1.6E-06 51.3 9.0 65 5-90 195-259 (406)
465 PRK15438 erythronate-4-phospha 95.5 0.044 9.5E-07 52.4 7.4 62 5-91 116-177 (378)
466 PRK13581 D-3-phosphoglycerate 95.5 0.07 1.5E-06 53.5 9.0 64 5-90 140-203 (526)
467 PRK14194 bifunctional 5,10-met 95.5 0.04 8.8E-07 50.8 6.7 55 5-92 159-213 (301)
468 PRK08818 prephenate dehydrogen 95.5 0.14 3E-06 48.9 10.4 57 4-89 3-59 (370)
469 PLN02306 hydroxypyruvate reduc 95.4 0.084 1.8E-06 50.7 9.1 105 5-132 165-273 (386)
470 KOG1208 Dehydrogenases with di 95.4 0.52 1.1E-05 44.0 14.1 162 5-180 35-220 (314)
471 cd00401 AdoHcyase S-adenosyl-L 95.4 0.15 3.2E-06 49.4 10.7 66 5-91 202-267 (413)
472 PRK06719 precorrin-2 dehydroge 95.4 0.1 2.2E-06 43.6 8.2 65 5-88 13-77 (157)
473 PRK06598 aspartate-semialdehyd 95.3 0.054 1.2E-06 51.5 7.3 73 6-90 2-74 (369)
474 PRK00257 erythronate-4-phospha 95.3 0.053 1.1E-06 51.9 7.3 62 5-91 116-177 (381)
475 COG0002 ArgC Acetylglutamate s 95.3 0.046 1E-06 51.0 6.5 35 5-45 2-36 (349)
476 PRK00258 aroE shikimate 5-dehy 95.3 0.11 2.4E-06 47.6 9.0 74 5-92 123-196 (278)
477 TIGR01327 PGDH D-3-phosphoglyc 95.2 0.073 1.6E-06 53.3 8.2 65 5-90 138-202 (525)
478 PRK06436 glycerate dehydrogena 95.2 0.054 1.2E-06 50.3 6.8 88 5-131 122-209 (303)
479 PRK05690 molybdopterin biosynt 95.2 0.096 2.1E-06 47.1 8.1 35 5-46 32-66 (245)
480 cd01079 NAD_bind_m-THF_DH NAD 95.2 0.053 1.2E-06 46.7 6.0 77 5-93 62-138 (197)
481 PF02882 THF_DHG_CYH_C: Tetrah 95.1 0.088 1.9E-06 44.1 7.2 56 4-92 35-90 (160)
482 PRK06046 alanine dehydrogenase 95.1 0.11 2.4E-06 48.7 8.8 74 4-89 128-201 (326)
483 PTZ00075 Adenosylhomocysteinas 95.1 0.084 1.8E-06 51.7 8.0 90 5-133 254-343 (476)
484 COG2423 Predicted ornithine cy 95.1 0.084 1.8E-06 49.5 7.7 73 5-88 130-202 (330)
485 PRK13301 putative L-aspartate 95.1 0.21 4.6E-06 45.2 9.9 85 5-124 2-88 (267)
486 cd01075 NAD_bind_Leu_Phe_Val_D 95.1 0.1 2.3E-06 45.3 7.8 35 4-46 27-61 (200)
487 cd01080 NAD_bind_m-THF_DH_Cycl 95.1 0.068 1.5E-06 45.2 6.4 55 4-92 43-98 (168)
488 PLN02494 adenosylhomocysteinas 95.0 0.11 2.3E-06 50.9 8.4 90 5-133 254-343 (477)
489 KOG4039 Serine/threonine kinas 95.0 0.084 1.8E-06 44.7 6.5 109 4-131 17-131 (238)
490 PRK13940 glutamyl-tRNA reducta 95.0 0.065 1.4E-06 52.0 6.9 73 5-92 181-253 (414)
491 PLN02858 fructose-bisphosphate 95.0 0.14 3.1E-06 56.8 10.2 66 4-89 3-68 (1378)
492 PLN03129 NADP-dependent malic 95.0 0.098 2.1E-06 52.3 8.0 119 6-144 322-452 (581)
493 cd05212 NAD_bind_m-THF_DH_Cycl 95.0 0.11 2.3E-06 42.6 7.1 56 4-92 27-82 (140)
494 PLN00203 glutamyl-tRNA reducta 95.0 0.15 3.3E-06 50.8 9.4 75 5-92 266-340 (519)
495 PF00670 AdoHcyase_NAD: S-aden 94.9 0.083 1.8E-06 44.2 6.5 66 5-91 23-88 (162)
496 TIGR00507 aroE shikimate 5-deh 94.9 0.16 3.6E-06 46.2 8.9 73 5-92 117-189 (270)
497 TIGR01850 argC N-acetyl-gamma- 94.9 0.082 1.8E-06 50.1 7.0 34 6-45 1-35 (346)
498 TIGR01809 Shik-DH-AROM shikima 94.8 0.09 1.9E-06 48.3 7.1 76 5-91 125-200 (282)
499 cd00757 ThiF_MoeB_HesA_family 94.8 0.17 3.7E-06 44.9 8.6 35 5-46 21-55 (228)
500 COG0702 Predicted nucleoside-d 94.8 0.099 2.1E-06 47.0 7.3 75 6-93 1-75 (275)
No 1
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=6.8e-73 Score=524.91 Aligned_cols=325 Identities=61% Similarity=0.954 Sum_probs=292.3
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (332)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~ 81 (332)
-.+|+||+||||+|+||+++++.|+..++++...+.||+|+|+++++++++|+++||+|+.++...++.++++.+++++|
T Consensus 1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~d 80 (326)
T PRK05442 1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKD 80 (326)
T ss_pred CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCC
Confidence 03567999999779999999999999998875566699999998766789999999999986555566777889999999
Q ss_pred CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHH
Q 020022 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDH 161 (332)
Q Consensus 82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds 161 (332)
||+||++||.++++|++|++++..|+++++++++.|.++++|++++|++|||+|+||++++++++|+|++|++|.|.||+
T Consensus 81 aDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~LDs 160 (326)
T PRK05442 81 ADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNAPDLPAENFTAMTRLDH 160 (326)
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHcCCCCHHHEEeeeHHHH
Confidence 99999999999999999999999999999999999999987789999999999999999999955999999766699999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCc
Q 020022 162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKL 241 (332)
Q Consensus 162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~ 241 (332)
+||++++|++++++|++|++++||||||+++||+||++++ +|.|+.+++.+++|..+++.+++++++++|+++||+
T Consensus 161 ~R~r~~la~~l~v~~~~V~~~vV~GeHG~s~~~~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~ 236 (326)
T PRK05442 161 NRALSQLAAKAGVPVADIKKMTVWGNHSATQYPDFRHATI----DGKPAAEVINDQAWLEDTFIPTVQKRGAAIIEARGA 236 (326)
T ss_pred HHHHHHHHHHhCcChHHeEEeEEEECCcCceeeccccCEE----CCEEHHHHccchhhHHHHHHHHHHhhHHHHHhCcCC
Confidence 9999999999999999999987799999999999999999 999999988666676679999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEecCCcEEEecCCCCCHHHHHHHHHHHHHHH
Q 020022 242 SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELS 321 (332)
Q Consensus 242 ~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~ 321 (332)
++|.+++.++++++++++.++|+++++|+|++++|+||+|+|+|||+||++.+|+++++++++|+++|+++|++|++.|+
T Consensus 237 t~~~~a~~~~~~iv~ail~~~~~~~i~~~sv~~~g~ygi~~~v~~s~P~~ig~Gv~~iv~~l~L~~~E~~~l~~s~~~l~ 316 (326)
T PRK05442 237 SSAASAANAAIDHVRDWVLGTPEGDWVSMGVPSDGSYGIPEGLIFGFPVTCENGEYEIVQGLEIDDFSREKIDATLAELE 316 (326)
T ss_pred ccHHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCccCCcCCeEEEEEEEEcCcEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 99987664368988876665446999999999999999999999999998559999996668999999999999999999
Q ss_pred HHHHHHhhh
Q 020022 322 EEKALAYSC 330 (332)
Q Consensus 322 ~~~~~~~~~ 330 (332)
++.+.+-..
T Consensus 317 ~~~~~~~~~ 325 (326)
T PRK05442 317 EERDAVKHL 325 (326)
T ss_pred HHHHHHHhh
Confidence 999887654
No 2
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=6.1e-73 Score=524.60 Aligned_cols=319 Identities=64% Similarity=0.992 Sum_probs=289.5
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a 82 (332)
++|.||+||||+|+||+++++.|+..++++.+..+||+|+|++++.++++|+++||+|++.+...++.++++.+++++||
T Consensus 1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~da 80 (323)
T TIGR01759 1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDV 80 (323)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCC
Confidence 36789999997699999999999999887755566999999986557789999999999865555666777889999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHH
Q 020022 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~ 162 (332)
|+||++||.++++|++|++++..|++++++++++|.+++||++++|++|||+|+||++++++++|+|++|++|+|.|||+
T Consensus 81 DvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s~g~p~~rViG~t~LDs~ 160 (323)
T TIGR01759 81 DAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIASKNAPDIPPKNFSAMTRLDHN 160 (323)
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEeeHHHHH
Confidence 99999999999999999999999999999999999999976899999999999999999999439999997667999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~ 242 (332)
||++++|++++++|++|+.++||||||+++||+||++++ +|+|+.+++.++.|..+++.+++++++++|+++||++
T Consensus 161 R~r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t 236 (323)
T TIGR01759 161 RAKYQLAAKAGVPVSDVKNVIIWGNHSNTQVPDFTHATV----DGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEARGAS 236 (323)
T ss_pred HHHHHHHHHhCcChHHeEEeEEEecCCCceeeccccCEE----CCccHHHHhcchhhHHHHHHHHHHhhHHHHHhccCCc
Confidence 999999999999999998787899999999999999999 9999999877655656899999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHcCCCC--ceEEEeeeecCC-CCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022 243 SALSAASSACDHIRDWVLGTPE--GTWVSMGVYSDG-SYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE 318 (332)
Q Consensus 243 ~~~~~a~~~~~~i~~~i~~~~~--~~i~~~sv~~~g-~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~ 318 (332)
+|+++|.++++++.+ +.+| + ++++|+|++++| +||+|+|+|||+||++ ++|+++++++++|+++|+++|++|++
T Consensus 237 ~~~~~a~a~~~iv~a-il~~-~~~~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l~L~~~E~~~l~~sa~ 314 (323)
T TIGR01759 237 SAASAANAAIDHVRD-WVTG-TPEGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGLPLDDFVRGKLDATED 314 (323)
T ss_pred chHHHHHHHHHHHHH-HHcC-CCCCcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHH
Confidence 987777789998876 4455 5 899999999999 9999899999999997 99999998768999999999999999
Q ss_pred HHHHHHHHH
Q 020022 319 ELSEEKALA 327 (332)
Q Consensus 319 ~i~~~~~~~ 327 (332)
.|+++++.+
T Consensus 315 ~lk~~~~~~ 323 (323)
T TIGR01759 315 ELLEEKEEA 323 (323)
T ss_pred HHHHHHhcC
Confidence 999998753
No 3
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=1.5e-71 Score=522.41 Aligned_cols=322 Identities=43% Similarity=0.692 Sum_probs=292.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
+|.||+||||+|+||+++++.|+..++++++++++|+|+|++.++++++|+++||+|+.+++..+++++++.+++++|||
T Consensus 43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~~kdaD 122 (387)
T TIGR01757 43 KTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYEVFEDAD 122 (387)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCCHHHhCCCC
Confidence 57899999977999999999999999988777788999966555789999999999998666556777788899999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHH
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN 162 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~ 162 (332)
+||++||.|+++|++|.+++..|+++++++++.|.++++|++++|++|||+|+||+++++. +|+|++| |++||.||++
T Consensus 123 IVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~k~-sg~~~~rviG~gT~LDsa 201 (387)
T TIGR01757 123 WALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAMKN-APNIPRKNFHALTRLDEN 201 (387)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHHHH-cCCCcccEEEecchhHHH
Confidence 9999999999999999999999999999999999998878999999999999999999998 5776666 7899999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~ 242 (332)
||+++||+++++++++|+..+||||||++|||+||+++| +|+|+.+++.++.|..+++.+++++++++|++.||++
T Consensus 202 R~r~~LA~~l~v~~~~V~~~~V~GeHGds~vp~~S~a~V----~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~~KG~t 277 (387)
T TIGR01757 202 RAKCQLALKSGKFYTSVSNVTIWGNHSTTQVPDFVNAKI----GGRPAKEVIKDTKWLEEEFTPTVQKRGGALIKKWGRS 277 (387)
T ss_pred HHHHHHHHHHCcChhHcceeEEEecCCCcEEecceeeEE----CCEEhHHhcccccchHHHHHHHHHHHHHHHHhccCch
Confidence 999999999999999997555799999999999999999 9999999887666777899999999999999999988
Q ss_pred chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEe-cCCCCCHHHHHHHHHHHHH
Q 020022 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIV-QGLSIDEFSRKKLDLTAEE 319 (332)
Q Consensus 243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~-~~~~l~~~E~~~l~~s~~~ 319 (332)
+|+++|.++++.+++|+.+.++++++|+|++++|+ ||+|+|+|||+||++ ++|+++++ + ++|+++|+++|++|++.
T Consensus 278 ~~~s~a~ai~~~i~ai~~g~d~~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~-l~L~~~E~~~l~~Sa~~ 356 (387)
T TIGR01757 278 SAASTAVSIADAIKSLVVPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATD-VSMDDFLRERIRKSEDE 356 (387)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCC-CCCCHHHHHHHHHHHHH
Confidence 88777888999998877554489999999999996 999899999999997 89999996 6 99999999999999999
Q ss_pred HHHHHHHHhhhh
Q 020022 320 LSEEKALAYSCL 331 (332)
Q Consensus 320 i~~~~~~~~~~~ 331 (332)
|+++.+.+...+
T Consensus 357 L~~e~~~~~~~~ 368 (387)
T TIGR01757 357 LLKEKECVAHLI 368 (387)
T ss_pred HHHHHHHHHHhh
Confidence 999998886643
No 4
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=3.9e-71 Score=502.72 Aligned_cols=307 Identities=34% Similarity=0.478 Sum_probs=281.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-ChhhhcCCCcE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI 84 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-~~~~al~~aDi 84 (332)
+||+|||| |+||+++++.|+..++.. |++|+|++ +++++|.++||.|+..+......++. +.+++++|||+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~-----el~LiDi~--~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDi 72 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGS-----ELVLIDIN--EEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADI 72 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccc-----eEEEEEcc--cccccchhcchhhcchhccCceEEecCCChhhhcCCCE
Confidence 59999995 999999999997776543 89999999 47899999999999876655565554 55899999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHHH
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNR 163 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r 163 (332)
||++||.||+|||+|+|++..|++|+++++++|.++| |+++++++|||+|+|||+++++ +|+|++| |+++|.||++|
T Consensus 73 VvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~-~d~ivlVvtNPvD~~ty~~~k~-sg~p~~rvig~gt~LDsaR 150 (313)
T COG0039 73 VVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA-PDAIVLVVTNPVDILTYIAMKF-SGFPKNRVIGSGTVLDSAR 150 (313)
T ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCeEEEEecCcHHHHHHHHHHh-cCCCccceecccchHHHHH
Confidence 9999999999999999999999999999999999999 4899999999999999999998 7899888 79999999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhh-hcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVK-DDAWLNGEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~-~~~~~~~~~~~~v~~~~~~i~~~kg~~ 242 (332)
|+++||+++++++++|++++ +|+||++|||+||+++| +|+|+.++++ .+.|..+++.+++++++++|++.||+.
T Consensus 151 ~~~~lae~~~v~~~~V~~~V-iGeHGdt~vp~~S~a~v----~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~kG~~ 225 (313)
T COG0039 151 FRTFLAEKLGVSPKDVHAYV-IGEHGDTMVPLWSQATV----GGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAKGAG 225 (313)
T ss_pred HHHHHHHHhCCChhHceeeE-eccCCCceEEeeeeeeE----CCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHccCcc
Confidence 99999999999999999885 79999999999999999 9999999988 566777899999999999999999764
Q ss_pred chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHH
Q 020022 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELS 321 (332)
Q Consensus 243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~ 321 (332)
+++++|.+++++.++ |+.| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|+
T Consensus 226 t~~~~A~a~a~~~~a-il~d-~~~vl~~s~~l~G~yg~-~dv~~gvP~~lg~~Gv~~iie-~~l~~~E~~~l~~s~~~lk 301 (313)
T COG0039 226 TYYGPAAALARMVEA-ILRD-EKRVLPVSVYLDGEYGV-EDVYFGVPAVLGKNGVEEILE-LLLSDDEQEKLDKSAEELK 301 (313)
T ss_pred chhhHHHHHHHHHHH-HHcC-CCceEEEEEeecCccCc-CCeEEEeeEEEcCCCcEEEec-CCCCHHHHHHHHHHHHHHH
Confidence 677888889997765 6667 89999999999999994 99999999997 999999998 9999999999999999999
Q ss_pred HHHHHHhhhh
Q 020022 322 EEKALAYSCL 331 (332)
Q Consensus 322 ~~~~~~~~~~ 331 (332)
+.++.+..++
T Consensus 302 ~~i~~~~~~~ 311 (313)
T COG0039 302 KNIELVKELV 311 (313)
T ss_pred HHHHHHHHhh
Confidence 9999998875
No 5
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=5e-70 Score=518.95 Aligned_cols=320 Identities=40% Similarity=0.632 Sum_probs=290.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCce--EEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPV--ILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~--ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~ 81 (332)
++.||+||||+|+||+++++.|+..+++++++++ ||+|+|++ +++++|+++||+|+.+++..++.++++.+++++|
T Consensus 99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~--~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kd 176 (444)
T PLN00112 99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERS--KQALEGVAMELEDSLYPLLREVSIGIDPYEVFQD 176 (444)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCC--cchhHHHHHHHHHhhhhhcCceEEecCCHHHhCc
Confidence 4689999997799999999999999888765555 89999988 4789999999999987666677777889999999
Q ss_pred CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-cCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechH
Q 020022 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH-AAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRL 159 (332)
Q Consensus 82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~l 159 (332)
||+||++||.|+++|++|.|++..|+++++++++.|.++ + |++++|++|||+|+||+++++. +|+++++ |+.||.|
T Consensus 177 aDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~-p~~ivIVVsNPvDv~t~v~~k~-sg~~~~rViGtgT~L 254 (444)
T PLN00112 177 AEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVAS-RNVKVIVVGNPCNTNALICLKN-APNIPAKNFHALTRL 254 (444)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEcCCcHHHHHHHHHHH-cCCCCcceEEeeccH
Confidence 999999999999999999999999999999999999995 6 6899999999999999999998 5766666 8999999
Q ss_pred HHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhc
Q 020022 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKAR 239 (332)
Q Consensus 160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~k 239 (332)
|++||+++||+++++++++|++++||||||++|||+||+++| +|+|+.+++.++.|+.+++.+++++++++|+++|
T Consensus 255 DsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsqvp~wS~a~V----~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~~k 330 (444)
T PLN00112 255 DENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKI----NGLPVKEVITDHKWLEEEFTPKVQKRGGVLIKKW 330 (444)
T ss_pred HHHHHHHHHHHHhCcCHHHcccceEEecCCCceeeccceeEE----CCccHHHhhccccchHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999997766799999999999999999 9999999987767877899999999999999999
Q ss_pred CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCC-CCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHH
Q 020022 240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTA 317 (332)
Q Consensus 240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g-~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~ 317 (332)
|+++++++|.+++++|.+|+.+.++++++|+|++++| +||+|+|+|||+||++ ++|+++++++++|+++|+++|++|+
T Consensus 331 G~t~~~s~a~ai~~~I~ail~~~d~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el~L~~~E~~~l~~Sa 410 (444)
T PLN00112 331 GRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDVEIDDYLRERIKKSE 410 (444)
T ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCCCCCHHHHHHHHHHH
Confidence 9888877788999999887655448999999999999 5999899999999997 8999999933999999999999999
Q ss_pred HHHHHHHHHHhhhh
Q 020022 318 EELSEEKALAYSCL 331 (332)
Q Consensus 318 ~~i~~~~~~~~~~~ 331 (332)
++|.++.+.+...+
T Consensus 411 ~~L~~e~~~~~~~~ 424 (444)
T PLN00112 411 AELLAEKRCVAHLT 424 (444)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998886553
No 6
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.5e-69 Score=502.71 Aligned_cols=317 Identities=56% Similarity=0.862 Sum_probs=288.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
+|+||+||||+|+||+++++.|+..++++++.++||+|+|++++.++++|+++||+|++++...+++++++.+++++|||
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 80 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDAD 80 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCC
Confidence 47899999966999999999999999988667779999999876677999999999998665556777788899999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHH
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR 163 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r 163 (332)
+||++||.++++|++|.+++..|+++++++++.|.+++||++++|++|||+|+||++++++++++|+++++|.|.||++|
T Consensus 81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~R 160 (322)
T cd01338 81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNR 160 (322)
T ss_pred EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHHHHHH
Confidence 99999999999999999999999999999999999999668999999999999999999984369999976779999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccc
Q 020022 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSS 243 (332)
Q Consensus 164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~ 243 (332)
|++.+|+++|+++++|++++|||+||+++||+||++++ +|.|+.+++.+..|..+++.+++++++++|+++||+++
T Consensus 161 l~~~la~~lgv~~~~v~~~~V~GeHG~s~vp~~S~~~v----~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~kG~t~ 236 (322)
T cd01338 161 AKSQLAKKAGVPVTDVKNMVIWGNHSPTQYPDFTNATI----GGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKARGASS 236 (322)
T ss_pred HHHHHHHHhCcChhHeEEEEEEeCCcccEEEehhhcEE----CCEeHHHhcChHhhHHHHHHHHHHhhHHHHHhCcCCcc
Confidence 99999999999999999888899999999999999999 99999888766566678999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHcCCCC--ceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHH
Q 020022 244 ALSAASSACDHIRDWVLGTPE--GTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEEL 320 (332)
Q Consensus 244 ~~~~a~~~~~~i~~~i~~~~~--~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i 320 (332)
|.+++.++++++.+++ +| + ++++|+|++++|+||+|+|+|||+||++ ++|++++++ ++|+++|+++|++|++.|
T Consensus 237 ~~~~a~a~~~iv~ail-~~-~~~~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~l 313 (322)
T cd01338 237 AASAANAAIDHMRDWV-LG-TPEGDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEG-LEIDDFAREKIDATLAEL 313 (322)
T ss_pred HHHHHHHHHHHHHHHh-cC-CCCCeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeC-CCCCHHHHHHHHHHHHHH
Confidence 8776568999887655 45 5 6999999999999999999999999987 999999997 999999999999999999
Q ss_pred HHHHHHH
Q 020022 321 SEEKALA 327 (332)
Q Consensus 321 ~~~~~~~ 327 (332)
+++.+.+
T Consensus 314 ~~~~~~~ 320 (322)
T cd01338 314 LEEREAV 320 (322)
T ss_pred HHHHHHh
Confidence 9998765
No 7
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3.7e-69 Score=500.17 Aligned_cols=315 Identities=57% Similarity=0.880 Sum_probs=282.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
.||+||||+|+||+++++.|+..++++.+...+++|+|+++..++++++++||.|+..+..+.+.++++.+++++|||+|
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiV 80 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVA 80 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEE
Confidence 48999997799999999999999988744455799999985336789999999999766555566767889999999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC-CCCCcEEEechHHHHHH
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS-IPAKNITCLTRLDHNRA 164 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~-~~~~~i~~~t~lds~r~ 164 (332)
|++||.++++|++|.+++..|+++++++++.|+++|.|++++|++|||+|+||++++++ +| +|++|++|+|.|||+||
T Consensus 81 VitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~-sg~~p~~~vig~t~LDs~R~ 159 (323)
T cd00704 81 ILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIALKN-APNLPPKNFTALTRLDHNRA 159 (323)
T ss_pred EEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHH-cCCCCHHHEEEeeHHHHHHH
Confidence 99999999999999999999999999999999999646899999999999999999999 67 69999767799999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhh---hhcccchhHHHHHHHhhHHHHHHhcCc
Q 020022 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV---KDDAWLNGEFITTVQQRGAAIIKARKL 241 (332)
Q Consensus 165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~---~~~~~~~~~~~~~v~~~~~~i~~~kg~ 241 (332)
++++|++++++|++|++++||||||+++||+||+++| +|.|+.++. .++.|..+++.+++++++++|+++||+
T Consensus 160 r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~kg~ 235 (323)
T cd00704 160 KAQVARKLGVRVSDVKNVIIWGNHSNTQVPDLSNAVV----YGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKKRGA 235 (323)
T ss_pred HHHHHHHhCcCHHHceeeeEEecccCceeecccccee----cCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhccCc
Confidence 9999999999999998777899999999999999999 999998874 233566678999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCc--eEEEeeeecCCCC-CCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHH
Q 020022 242 SSALSAASSACDHIRDWVLGTPEG--TWVSMGVYSDGSY-NVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTA 317 (332)
Q Consensus 242 ~~~~~~a~~~~~~i~~~i~~~~~~--~i~~~sv~~~g~y-gi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~ 317 (332)
++|+++|.++++++.+++ +| ++ +++|+|++++|+| |+|+|+|||+||++ ++||+++++ ++|+++|+++|++|+
T Consensus 236 t~~~~~a~a~~~iv~ail-~~-~~~~~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~-l~L~~~E~~~l~~s~ 312 (323)
T cd00704 236 SSAASAAKAIADHVKDWL-FG-TPPGEIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVED-LKLNDWLREKLKATE 312 (323)
T ss_pred chhHHHHHHHHHHHHHHH-hC-CCCCcEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecC-CCCCHHHHHHHHHHH
Confidence 998766778999887755 45 66 9999999999999 99999999999987 999999987 999999999999999
Q ss_pred HHHHHHHHHHh
Q 020022 318 EELSEEKALAY 328 (332)
Q Consensus 318 ~~i~~~~~~~~ 328 (332)
+.|+++.+.++
T Consensus 313 ~~l~~~~~~~~ 323 (323)
T cd00704 313 EELIEEKEIAL 323 (323)
T ss_pred HHHHHHHHhhC
Confidence 99999988763
No 8
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2.5e-68 Score=495.82 Aligned_cols=320 Identities=70% Similarity=1.066 Sum_probs=286.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
+|.||+||||+|+||+++++.|+..++++++...+|+|+|++++.++++++++|+.|++.++..+++...+++++++|||
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aD 80 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVD 80 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCC
Confidence 47899999988999999999999988775333348999999765566888999999987655556666677789999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHH
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNR 163 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r 163 (332)
+|||+||.+++++++|.+++..|+++++++++.|.++++|++++|++|||+|+||++++++++++|+++|+++|.||++|
T Consensus 81 iVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs~R 160 (325)
T cd01336 81 VAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHNR 160 (325)
T ss_pred EEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHHHH
Confidence 99999999999999999999999999999999999998678999999999999999999996688888899999999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCC----CcchhhhhhhcccchhHHHHHHHhhHHHHHHhc
Q 020022 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG----EKPVRELVKDDAWLNGEFITTVQQRGAAIIKAR 239 (332)
Q Consensus 164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~----g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~k 239 (332)
|++++|+++++++++|++++||||||++|||+||++++ + |+|+.+++.++.|..+++.+++++++++|++.|
T Consensus 161 ~r~~la~~l~v~~~~v~~~~V~GeHG~s~~~~~S~~~v----~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~~ 236 (325)
T cd01336 161 AKSQIALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATV----ELNGKGKPAREAVKDDAWLNGEFISTVQKRGAAVIKAR 236 (325)
T ss_pred HHHHHHHHhCcChhhceEeEEEEcCCCCeeecccccee----ecCCCCccHHHHhcccchhHHHHHHHHHhhHHHHHHcc
Confidence 99999999999999998887899999999999999999 8 999999887666767899999999999999975
Q ss_pred CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022 240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE 318 (332)
Q Consensus 240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~ 318 (332)
++++++++|.++++++++++.+.++++++|+|++++|+||+|+|+|||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus 237 ~g~t~~~~a~~~~~i~~ail~~~~~~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~-~~L~~~E~~~l~~s~~ 315 (325)
T cd01336 237 KLSSAMSAAKAICDHVHDWWFGTPEGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQG-LSIDDFSREKIDATAK 315 (325)
T ss_pred ccchHHHHHHHHHHHHHHHHcCCCCCeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecC-CCCCHHHHHHHHHHHH
Confidence 54566667778999888755542358999999999999999999999999997 999999997 9999999999999999
Q ss_pred HHHHHHHHHh
Q 020022 319 ELSEEKALAY 328 (332)
Q Consensus 319 ~i~~~~~~~~ 328 (332)
.|+++++.++
T Consensus 316 ~l~~e~~~~~ 325 (325)
T cd01336 316 ELVEEKETAL 325 (325)
T ss_pred HHHHHHHhhC
Confidence 9999998763
No 9
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=1.4e-67 Score=489.91 Aligned_cols=317 Identities=70% Similarity=1.083 Sum_probs=277.8
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEE
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV 86 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi 86 (332)
||+||||+|+||+++++.|+..++++.+++++++|+|++++.++++++++||.|++.+....+..+++.+++++|||+||
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 69999977999999999999988876434457999999876667899999999998655555555557799999999999
Q ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHHHHH
Q 020022 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALG 166 (332)
Q Consensus 87 ~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~ 166 (332)
++||.+++++++|.+++..|+++++++++.|.++++|++++|++|||+|+||++++++++++|++.|++||.|||+||++
T Consensus 81 itAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg~~~~~vig~gt~LDs~R~r~ 160 (324)
T TIGR01758 81 LVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAPSIPPKNFSALTRLDHNRALA 160 (324)
T ss_pred EcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCCcceEEEeeehHHHHHHH
Confidence 99999999999999999999999999999999996468999999999999999999995455656689999999999999
Q ss_pred HHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCC-C---cchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022 167 QISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG-E---KPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 167 ~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~-g---~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~ 242 (332)
++|++++++|++|++++||||||+++||+||+++| + | +|+.+++.++.|+.+++.+++++++++|++.||++
T Consensus 161 ~la~~l~v~~~~V~~~~V~GeHG~s~v~~~S~~~v----~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~~ 236 (324)
T TIGR01758 161 QVAERAGVPVSDVKNVIIWGNHSSTQYPDVNHATV----TKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRARKLS 236 (324)
T ss_pred HHHHHhCCChhhceEeEEEECCCCCccccccccee----cCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhccCCC
Confidence 99999999999998766799999999999999999 8 9 99999876655666899999999999999988766
Q ss_pred chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHH
Q 020022 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEEL 320 (332)
Q Consensus 243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i 320 (332)
+++++|.++++++++++.+.++++++|+|++++|+ ||+|+|+|||+||++ ++|++.+.+ ++|+++|+++|++|++.|
T Consensus 237 t~~~ia~~~~~i~~ai~~~~~~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~e-l~L~~~E~~~l~~s~~~l 315 (324)
T TIGR01758 237 SALSAAKAAVDQMHDWVLGTPEGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEG-LCVDDSSRKKLALTAKEL 315 (324)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 67777888999888755332389999999999999 999899999999997 455555554 999999999999999999
Q ss_pred HHHHHHHh
Q 020022 321 SEEKALAY 328 (332)
Q Consensus 321 ~~~~~~~~ 328 (332)
++.++.+.
T Consensus 316 k~~~~~~~ 323 (324)
T TIGR01758 316 EEERDEAL 323 (324)
T ss_pred HHHHHHhh
Confidence 99998874
No 10
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.7e-67 Score=485.80 Aligned_cols=298 Identities=20% Similarity=0.312 Sum_probs=269.1
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-cceEeeCChhhhcCCCcEE
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~~~~~~~~~~~al~~aDiV 85 (332)
||+||| +|+||+++|+.|+..++++ |++|+|+++ ++++|+++||+|...... .+++++++.+++++|||+|
T Consensus 1 Ki~IIG-aG~VG~~~a~~l~~~~~~~-----elvL~Di~~--~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIG-AGHVGSAVLNYALALGLFS-----EIVLIDVNE--GVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADII 72 (307)
T ss_pred CEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--chhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEE
Confidence 799999 5999999999999998877 999999984 788999999999764332 3556666779999999999
Q ss_pred EEeCCCCCCCCCC--HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHH
Q 020022 86 VMVGGFPRKEGME--RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN 162 (332)
Q Consensus 86 i~~ag~~~~~~~~--r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~ 162 (332)
|++||.+++||++ |+|++..|+++++++++.+.+++ |++++|++|||+|+||++++++ +|+|++| |+.||.|||+
T Consensus 73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~-p~~i~ivvsNPvDv~t~~~~k~-sg~p~~rviG~gt~LDs~ 150 (307)
T cd05290 73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT-KEAVIILITNPLDIAVYIAATE-FDYPANKVIGTGTMLDTA 150 (307)
T ss_pred EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecCcHHHHHHHHHHH-hCcChhheecccchHHHH
Confidence 9999999999999 69999999999999999999999 6899999999999999999998 7999998 6778999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh---cccchhHHHHHHHhhHHHHHHhc
Q 020022 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD---DAWLNGEFITTVQQRGAAIIKAR 239 (332)
Q Consensus 163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~---~~~~~~~~~~~v~~~~~~i~~~k 239 (332)
||++++|+++|++|++|+++ ||||||++|||+||++++ +|.|+.++++. +.|..+++.+++++++++|+++|
T Consensus 151 R~~~~la~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~v----~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~K 225 (307)
T cd05290 151 RLRRIVADKYGVDPKNVTGY-VLGEHGSHAFPVWSLVNI----AGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNRK 225 (307)
T ss_pred HHHHHHHHHhCCCcccEEEE-EEecCCCceEEeeeeeEE----CCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999988 589999999999999999 99999988742 23345789999999999999999
Q ss_pred CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022 240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE 318 (332)
Q Consensus 240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~ 318 (332)
|+++|.. |.++++++.+ |+.| +++++|+|++++|+|| ++|+|+|+||++ ++|++++++ ++|+++|+++|++|++
T Consensus 226 G~t~~~i-a~a~~~ii~a-il~d-~~~v~~vsv~~~G~yg-~~~v~~svP~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~ 300 (307)
T cd05290 226 GWTNAGI-AKSASRLIKA-ILLD-ERSILPVCTLLSGEYG-LSDVALSLPTVIGAKGIERVLE-IPLDEWELEKLHKSAK 300 (307)
T ss_pred CeehHHH-HHHHHHHHHH-HHhC-CCeEEEEEEeeCCccC-CCCEEEEEEEEEeCCCceEecC-CCCCHHHHHHHHHHHH
Confidence 9888765 5688997766 6667 8999999999999999 589999999997 999999998 9999999999999999
Q ss_pred HHHHHH
Q 020022 319 ELSEEK 324 (332)
Q Consensus 319 ~i~~~~ 324 (332)
.|++.+
T Consensus 301 ~i~~~~ 306 (307)
T cd05290 301 AIRETI 306 (307)
T ss_pred HHHHHh
Confidence 999864
No 11
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.3e-67 Score=455.97 Aligned_cols=299 Identities=24% Similarity=0.352 Sum_probs=272.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCCc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVN 83 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~aD 83 (332)
..||+|+| +|.||.+++..++.+++.. |++|+|.++ ++++|++|||+|++..+ .+++.... +|.+.++++
T Consensus 20 ~~KItVVG-~G~VGmAca~siL~k~Lad-----el~lvDv~~--dklkGE~MDLqH~s~f~~~~~V~~~~-Dy~~sa~S~ 90 (332)
T KOG1495|consen 20 HNKITVVG-VGQVGMACAISILLKGLAD-----ELVLVDVNE--DKLKGEMMDLQHGSAFLSTPNVVASK-DYSVSANSK 90 (332)
T ss_pred CceEEEEc-cchHHHHHHHHHHHhhhhh-----ceEEEecCc--chhhhhhhhhccccccccCCceEecC-cccccCCCc
Confidence 36999999 7999999999999999876 999999985 78999999999987533 35665554 578899999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHH
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN 162 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~ 162 (332)
+||+|||..+++|++|.+++++|+.+++.+.+.+.+|. |++++|++|||+|+|||+.|++ +|||.+| ||.||.|||+
T Consensus 91 lvIiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~yS-pd~~llvvSNPVDilTYv~wKL-SgfP~nRViGsGcnLDsa 168 (332)
T KOG1495|consen 91 LVIITAGARQSEGESRLDLVQRNVDIFKAIIPALVKYS-PDCILLVVSNPVDILTYVTWKL-SGFPKNRVIGSGCNLDSA 168 (332)
T ss_pred EEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecCchHHHHHHHHHH-cCCcccceeccCcCccHH
Confidence 99999999999999999999999999999999999997 7999999999999999999999 8999998 7889999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh-------cccchhHHHHHHHhhHHHH
Q 020022 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD-------DAWLNGEFITTVQQRGAAI 235 (332)
Q Consensus 163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~-------~~~~~~~~~~~v~~~~~~i 235 (332)
||+++++++||++|+++++++ +||||++.||+||.+.| .|.++.++..+ +.| +++.+++.+.+|||
T Consensus 169 RFryLi~~~Lg~~pss~hgwI-iGEHGdSsV~vWSgvni----AGv~l~~l~~~~~t~~d~e~w--~eihK~v~~sayev 241 (332)
T KOG1495|consen 169 RFRYLIGNRLGVHPSSCHGWI-IGEHGDSSVPVWSGVNI----AGVSLKDLNPDLGTDYDPENW--KEIHKQVVDSAYEV 241 (332)
T ss_pred HHHHHHHHHhCCCcccceEEE-eeccCCccceecccccc----cceEHhHhChhhcCCCCHHHH--HHHHHHHHHHHHHH
Confidence 999999999999999999996 79999999999999999 99999887542 346 68999999999999
Q ss_pred HHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022 236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD 314 (332)
Q Consensus 236 ~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~ 314 (332)
++.||||+|..+. +.++++. +|.+| .++++|+|+..+|.||+..|+|+|+||++ ++|+..++. .+|+++|.++|+
T Consensus 242 iklKGyTswaIgl-sva~l~~-ail~n-~~~i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~-~~Lt~~E~akL~ 317 (332)
T KOG1495|consen 242 IKLKGYTSWAIGL-SVADLAQ-AILRN-LRRIHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVK-QKLTDEEVAKLK 317 (332)
T ss_pred HHhcCchHHHHHH-HHHHHHH-HHHhC-cCceeeeeeccccccCCCCceEEecceeecCCchhhhhc-ccCCHHHHHHHH
Confidence 9999999997754 7888654 58888 99999999999999999889999999997 999999998 999999999999
Q ss_pred HHHHHHHHHHH
Q 020022 315 LTAEELSEEKA 325 (332)
Q Consensus 315 ~s~~~i~~~~~ 325 (332)
+||+.|.+.+.
T Consensus 318 kSa~tl~~~q~ 328 (332)
T KOG1495|consen 318 KSAKTLLEAQK 328 (332)
T ss_pred HHHHHHHHHHH
Confidence 99999987654
No 12
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.3e-66 Score=495.23 Aligned_cols=320 Identities=33% Similarity=0.588 Sum_probs=286.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
.|.+|+|+||+|.+|+++.+.|+.+.+||+++++.|+|+|+++++++++|.++||+|+++++..++.++++.+++++|||
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~~daD 201 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAFKDAH 201 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHhCCCC
Confidence 46899999999999999999999999999999999999999656789999999999999877767788888999999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCC-CeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHH
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAP-NCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~-~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~ 162 (332)
+||++||.|+++|++|.|++..|+++++++++.|.+++++ ++++|++|||+|++|++++++++++|+++|.|.+.+|++
T Consensus 202 vvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~k~apgiP~~rVig~gtlds~ 281 (452)
T cd05295 202 VIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAVARLQEN 281 (452)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEecchHHH
Confidence 9999999999999999999999999999999999999963 466777789999999999999779999998776668899
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCC--------CcchhhhhhhcccchhHHHHHHHhhHHH
Q 020022 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAG--------EKPVRELVKDDAWLNGEFITTVQQRGAA 234 (332)
Q Consensus 163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~--------g~~~~~~~~~~~~~~~~~~~~v~~~~~~ 234 (332)
|++++||+++|+++++|+..+||||||++|||+||+++|+++++ ++|+.+++.++.|..+++.+.+++++.
T Consensus 282 R~r~~LA~kl~V~~~~V~~~~VwGeHG~sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~~~~v~~rg~- 360 (452)
T cd05295 282 RAKALLARKLNVNSAGIKDVIVWGNIGGNTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEFVATLKSLSS- 360 (452)
T ss_pred HHHHHHHHHhCcCHHHceeeEEEEccCCceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHHHHHHHHHHH-
Confidence 99999999999999999877789999999999999999932210 299999887767877889999999887
Q ss_pred HHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHH
Q 020022 235 IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKL 313 (332)
Q Consensus 235 i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l 313 (332)
++|| ++++++|.++++++++|+.+.|+++++|+||+++|+||+|+|++||+||++ ++|++.+.+ ++|+++|+++|
T Consensus 361 --~rkg-sT~~siA~A~~~iv~ail~~t~~~~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~~-L~L~e~E~~kL 436 (452)
T cd05295 361 --SLNH-EAAISPAHAIATTLSYWYHGSPPGEIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVTD-LELSEILREVL 436 (452)
T ss_pred --hccC-ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEeC-CCCCHHHHHHH
Confidence 5666 455666789999999877664458999999999999999999999999997 889888887 99999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 020022 314 DLTAEELSEEKALAY 328 (332)
Q Consensus 314 ~~s~~~i~~~~~~~~ 328 (332)
++|+++|.++.+.+.
T Consensus 437 ~~S~~eL~~E~~~~~ 451 (452)
T cd05295 437 KRITSDLIQEKLVAL 451 (452)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999998763
No 13
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=4.7e-66 Score=474.92 Aligned_cols=305 Identities=87% Similarity=1.283 Sum_probs=270.8
Q ss_pred HHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHH
Q 020022 25 IARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMS 104 (332)
Q Consensus 25 l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~ 104 (332)
|+.+.+||.++++.++|+|+++++++++|+++||.|++.+....++.+++++++++|||+||++||.++++|++|.+++.
T Consensus 2 ~~~g~~~g~~~~~~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~ 81 (309)
T PLN00135 2 IARGVMLGPDQPVILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKGVNIAVMVGGFPRKEGMERKDVMS 81 (309)
T ss_pred cccccccCCCCeEEEEEecCcccccchhhHHHHHHhhhHHhcCCcEecCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHH
Confidence 34566778777889999999976689999999999998655556666667799999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHHHHHHHHHHHcCCCCCCeeeeE
Q 020022 105 KNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDVKNVI 183 (332)
Q Consensus 105 ~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r~~~~la~~l~v~~~~v~~~~ 183 (332)
.|+++++++++.|.+++.|++++|++|||+|+||+++++. +++|+++ |++||.||++||++++|+++++++++|+..+
T Consensus 82 ~N~~I~~~i~~~i~~~~~p~aivivvsNPvDv~t~~~~~~-sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~ 160 (309)
T PLN00135 82 KNVSIYKSQASALEKHAAPDCKVLVVANPANTNALILKEF-APSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVI 160 (309)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEeCCcHHHHHHHHHHH-cCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeE
Confidence 9999999999999996336899999999999999999998 6888876 8999999999999999999999999995444
Q ss_pred EEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccchHHHHHHHHHHHHHHHcC-C
Q 020022 184 IWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLG-T 262 (332)
Q Consensus 184 v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~~~~a~~~~~~i~~~i~~-~ 262 (332)
||||||+++||+||+++|+.+++|+|+.+++.++.|+.+++.+++++++++|+++|++++++++|.++++++++++.+ |
T Consensus 161 VlGeHG~s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~kg~t~~~ia~a~~~iv~ai~~~~~ 240 (309)
T PLN00135 161 IWGNHSSTQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTP 240 (309)
T ss_pred EEEcCCCceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHhCCc
Confidence 699999999999999999989999999998765557678999999999999999843345556677899988876654 5
Q ss_pred CCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 020022 263 PEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332 (332)
Q Consensus 263 ~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~~~~~ 332 (332)
+++++|+|++++|+||+|+|+|||+||++ ++|++.+++ ++|+++|+++|++|++.|+++.+.+.++|+
T Consensus 241 -~~~v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~-l~L~~~E~~~l~~S~~~lk~~~~~~~~~~~ 309 (309)
T PLN00135 241 -EGTWVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQG-LSIDEFSRKKMDATAKELKEEKELAYSCLS 309 (309)
T ss_pred -CCeEEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 79999999999999999889999999997 888888887 999999999999999999999999998885
No 14
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=3.8e-65 Score=472.88 Aligned_cols=306 Identities=24% Similarity=0.357 Sum_probs=274.9
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~ 80 (332)
|++..+||+||| +|.||+++++.|+..++++ ||+|+|+++ ++++|+++||+|+.... .++.++++.+++++
T Consensus 2 ~~~~~~ki~iiG-aG~vG~~~a~~l~~~~~~~-----el~L~D~~~--~~~~g~~~Dl~~~~~~~-~~~~i~~~~~~~~~ 72 (315)
T PRK00066 2 MKKQHNKVVLVG-DGAVGSSYAYALVNQGIAD-----ELVIIDINK--EKAEGDAMDLSHAVPFT-SPTKIYAGDYSDCK 72 (315)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCC--chhHHHHHHHHhhcccc-CCeEEEeCCHHHhC
Confidence 555678999999 5999999999999988876 899999984 78899999999987432 45666677889999
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechH
Q 020022 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRL 159 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~l 159 (332)
|||+||++||.|+++|++|.+++..|+++++++++.+++++ |++++|++|||+|+++++++++ +|+|++|+ +.+|.|
T Consensus 73 ~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~-~~~~vivvsNP~d~~~~~~~k~-sg~p~~~viG~gt~L 150 (315)
T PRK00066 73 DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASG-FDGIFLVASNPVDILTYATWKL-SGFPKERVIGSGTSL 150 (315)
T ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCcHHHHHHHHHHH-hCCCHHHEeecCchH
Confidence 99999999999999999999999999999999999999999 5799999999999999999998 69999985 778999
Q ss_pred HHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc----hhHHHHHHHhhHHHH
Q 020022 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL----NGEFITTVQQRGAAI 235 (332)
Q Consensus 160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~----~~~~~~~v~~~~~~i 235 (332)
|+.|+++++|+++|+++++|+++ ||||||++++|+||++++ +|.|+.+++.+..|. .+++.++++++++++
T Consensus 151 Ds~R~~~~la~~l~v~~~~V~~~-viGeHG~s~v~~~S~~~v----~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~i 225 (315)
T PRK00066 151 DSARFRYMLSEKLDVDPRSVHAY-IIGEHGDTEFPVWSHANV----AGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEI 225 (315)
T ss_pred HHHHHHHHHHHHhCCCcccEEEE-EEecCCCcceecceeceE----CCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 589999999999999999 999999987654443 247889999999999
Q ss_pred HHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022 236 IKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD 314 (332)
Q Consensus 236 ~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~ 314 (332)
++.||+++|. +|.++++++.+ +.+| ++.++|+|++++|+|| ++|+|||+||++ ++|++++++ ++|+++|+++|+
T Consensus 226 i~~kg~t~~~-~a~~~~~i~~a-il~~-~~~v~~~sv~~~g~yg-~~~v~~S~Pv~ig~~Gv~~i~~-l~L~~~E~~~L~ 300 (315)
T PRK00066 226 IEKKGATYYG-IAMALARITKA-ILNN-ENAVLPVSAYLEGQYG-EEDVYIGVPAVVNRNGIREIVE-LPLNDDEKQKFA 300 (315)
T ss_pred HhcCCeehHH-HHHHHHHHHHH-HHcC-CCeEEEEEEEeccccC-CCCEEEEeEEEEeCCcEEEEcC-CCCCHHHHHHHH
Confidence 9999988865 45688887766 6667 8999999999999999 589999999997 999999997 999999999999
Q ss_pred HHHHHHHHHHHHH
Q 020022 315 LTAEELSEEKALA 327 (332)
Q Consensus 315 ~s~~~i~~~~~~~ 327 (332)
+|+++|++.++..
T Consensus 301 ~s~~~l~~~~~~~ 313 (315)
T PRK00066 301 HSADVLKEIMDEA 313 (315)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998753
No 15
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=3.7e-65 Score=476.58 Aligned_cols=301 Identities=22% Similarity=0.352 Sum_probs=267.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CChhhhcCCCcE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDAVEACTGVNI 84 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~~~al~~aDi 84 (332)
+||+||| +|.||+++++.|+..++++ |++|+|+++ ++++|+++||+|++..... ..++ ++.+++++|||+
T Consensus 38 ~KI~IIG-aG~VG~~~a~~l~~~~l~~-----el~LiDi~~--~~~~g~a~DL~~~~~~~~~-~~i~~~~dy~~~~daDi 108 (350)
T PLN02602 38 TKVSVVG-VGNVGMAIAQTILTQDLAD-----ELALVDVNP--DKLRGEMLDLQHAAAFLPR-TKILASTDYAVTAGSDL 108 (350)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCC-----EEEEEeCCC--chhhHHHHHHHhhhhcCCC-CEEEeCCCHHHhCCCCE
Confidence 6999999 5999999999999988876 999999984 7889999999998743222 3443 245788999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHHH
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNR 163 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r 163 (332)
||++||.++++|++|.|++.+|+++++++++.|+++| |++++|++|||+|++|++++++ +|+|++|+ +.+|.||++|
T Consensus 109 VVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~-p~~ivivvtNPvdv~t~~~~k~-sg~p~~rviG~gt~LDs~R 186 (350)
T PLN02602 109 CIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYS-PDTILLIVSNPVDVLTYVAWKL-SGFPANRVIGSGTNLDSSR 186 (350)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCchHHHHHHHHHH-hCCCHHHEEeecchHHHHH
Confidence 9999999999999999999999999999999999999 5799999999999999999998 58999995 6678999999
Q ss_pred HHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhc------ccchhHHHHHHHhhHHHHHH
Q 020022 164 ALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD------AWLNGEFITTVQQRGAAIIK 237 (332)
Q Consensus 164 ~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~------~~~~~~~~~~v~~~~~~i~~ 237 (332)
+++++|+++|+++++|+++ ||||||+++||+||++++ +|.|+.+++... .| .+++.+++++++++|++
T Consensus 187 ~r~~lA~~l~v~~~~V~~~-ViGeHGds~vp~wS~~~i----~G~pl~~~~~~~~~~~~~~~-~~~i~~~v~~~g~eIi~ 260 (350)
T PLN02602 187 FRFLIADHLDVNAQDVQAY-IVGEHGDSSVALWSSVSV----GGVPVLSFLEKQQIAYEKET-LEEIHRAVVDSAYEVIK 260 (350)
T ss_pred HHHHHHHHhCCCccceeee-EEecCCCceEeeeeeeeE----CCEEHHHHhhccCCccCHHH-HHHHHHHHHHHHHHHHh
Confidence 9999999999999999988 589999999999999999 999999886431 12 35799999999999999
Q ss_pred hcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCC-CceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHH
Q 020022 238 ARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVP-AGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDL 315 (332)
Q Consensus 238 ~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~-~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~ 315 (332)
.||+|+|.. |.++++++.+ ++.| +++++|+|++++|+||+| +++|+|+||++ ++|++++++ ++|+++|+++|++
T Consensus 261 ~KG~t~~gi-a~a~a~ii~a-il~d-~~~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~~-l~L~~~E~~~l~~ 336 (350)
T PLN02602 261 LKGYTSWAI-GYSVASLVRS-LLRD-QRRIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVVN-VHLTDEEAERLRK 336 (350)
T ss_pred cCCccHHHH-HHHHHHHHHH-HHhc-CCCeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEec-CCCCHHHHHHHHH
Confidence 999877654 5578887765 6777 899999999999999994 89999999997 999999998 9999999999999
Q ss_pred HHHHHHHHHHHH
Q 020022 316 TAEELSEEKALA 327 (332)
Q Consensus 316 s~~~i~~~~~~~ 327 (332)
|++.|++.++.+
T Consensus 337 sa~~l~~~~~~~ 348 (350)
T PLN02602 337 SAKTLWEVQSQL 348 (350)
T ss_pred HHHHHHHHHHHh
Confidence 999999887654
No 16
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=1.7e-65 Score=471.68 Aligned_cols=293 Identities=23% Similarity=0.339 Sum_probs=266.2
Q ss_pred EEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEEeC
Q 020022 10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVG 89 (332)
Q Consensus 10 IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~~a 89 (332)
||| +|+||+++++.|+..++++ ||+|+|+++ ++++|+++||+|+..+...+++++.+.+++++|||+||++|
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~~-----el~L~Di~~--~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVita 72 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIAD-----EIVLIDINK--DKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVITA 72 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCCC-----EEEEEeCCC--ChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEECC
Confidence 689 6999999999999998876 999999984 78899999999998766566677778899999999999999
Q ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHHHHHHHH
Q 020022 90 GFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRALGQI 168 (332)
Q Consensus 90 g~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r~~~~l 168 (332)
|.|+++|++|.|++..|+++++++++.|++++ |++++|++|||+|++|++++++ +++|++| |+.+|.||++|+++++
T Consensus 73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~~~-sg~p~~~viG~gt~LDs~R~~~~l 150 (299)
T TIGR01771 73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSG-FDGIFLVATNPVDILTYVAWKL-SGFPKNRVIGSGTVLDTARLRYLL 150 (299)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHH-hCCCHHHEEeccchHHHHHHHHHH
Confidence 99999999999999999999999999999998 6799999999999999999998 6999998 5778999999999999
Q ss_pred HHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh----cccchhHHHHHHHhhHHHHHHhcCccch
Q 020022 169 SEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQQRGAAIIKARKLSSA 244 (332)
Q Consensus 169 a~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~----~~~~~~~~~~~v~~~~~~i~~~kg~~~~ 244 (332)
|+++++++++|+++ ||||||++|||+||+++| +|+|+.+++.+ ..|..+++.+++++++++|++.||+++|
T Consensus 151 a~~l~v~~~~V~~~-v~GeHG~s~vp~~S~~~v----~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~kG~t~~ 225 (299)
T TIGR01771 151 AEKLGVDPQSVHAY-IIGEHGDSEVPVWSSATI----GGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRKGATYY 225 (299)
T ss_pred HHHhCcCcCeEEEE-EEecCCCceeeceeeeEE----CCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhcCCeeeH
Confidence 99999999999987 599999999999999999 99999988754 1333568999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHH
Q 020022 245 LSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSE 322 (332)
Q Consensus 245 ~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~ 322 (332)
.+ |.++++++.+ |+.| +++++|+|++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|++.|++
T Consensus 226 ~~-a~a~~~~i~a-il~d-~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-l~L~~~E~~~l~~s~~~ik~ 299 (299)
T TIGR01771 226 GI-GMAVARIVEA-ILHD-ENRVLPVSAYLDGEYGI-KDVYIGVPAVLGRNGVEEIIE-LPLSDEEKEAFQKSAETLKK 299 (299)
T ss_pred HH-HHHHHHHHHH-HHcC-CCcEEEEEEEecccCCC-CCEEEEEEEEEeCCeeEEEcc-CCCCHHHHHHHHHHHHHHhC
Confidence 65 5589998776 5566 89999999999999998 69999999997 999999998 99999999999999999873
No 17
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1e-64 Score=468.75 Aligned_cols=302 Identities=25% Similarity=0.319 Sum_probs=268.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-cceEeeCChhhhcCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGV 82 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~~~~~~~~~~~al~~a 82 (332)
+.+||+||| +|+||+++++.|+..++.+ ||+|+|+++ ++++|+++||+|+..... ..+..+ +.+++++||
T Consensus 2 ~~~Ki~IiG-aG~VG~~~a~~l~~~~~~~-----el~LiD~~~--~~~~g~a~Dl~~~~~~~~~~~v~~~-~dy~~~~~a 72 (312)
T cd05293 2 PRNKVTVVG-VGQVGMACAISILAKGLAD-----ELVLVDVVE--DKLKGEAMDLQHGSAFLKNPKIEAD-KDYSVTANS 72 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--cHHHHHHHHHHHhhccCCCCEEEEC-CCHHHhCCC
Confidence 346999999 5999999999999988766 999999985 688999999999873222 344433 457789999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHH
Q 020022 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDH 161 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds 161 (332)
|+||+++|.++++|++|.+++.+|+++++++++.|++++ |++++|++|||+|+++++++++ +|+|++| |+.||.||+
T Consensus 73 divvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~-p~~~vivvsNP~d~~t~~~~k~-sg~p~~~viG~gt~Ld~ 150 (312)
T cd05293 73 KVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYS-PNAILLVVSNPVDIMTYVAWKL-SGLPKHRVIGSGCNLDS 150 (312)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEccChHHHHHHHHHHH-hCCCHHHEEecCchHHH
Confidence 999999999999999999999999999999999999999 5799999999999999999998 6999999 566799999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh-----cccchhHHHHHHHhhHHHHH
Q 020022 162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD-----DAWLNGEFITTVQQRGAAII 236 (332)
Q Consensus 162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~-----~~~~~~~~~~~v~~~~~~i~ 236 (332)
+|+++++|+++++++++|++++ |||||+++||+||++++ +|+|+.+++.. +....+++.+++++++++|+
T Consensus 151 ~R~~~~la~~l~v~~~~v~~~v-~GeHG~s~vp~~S~~~i----~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii 225 (312)
T cd05293 151 ARFRYLIAERLGVAPSSVHGWI-IGEHGDSSVPVWSGVNV----AGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVI 225 (312)
T ss_pred HHHHHHHHHHhCCChhhEEEEE-eecCCCCccccceeceE----CCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999885 89999999999999999 99999988632 11113689999999999999
Q ss_pred HhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHH
Q 020022 237 KARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDL 315 (332)
Q Consensus 237 ~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~ 315 (332)
+.||+++|.+ |.++++++.+ |.+| ++.++|+|++++|+||+|.|++||+||++ ++|++++++ ++|+++|+++|++
T Consensus 226 ~~kg~t~~~~-a~a~~~ii~a-il~d-~~~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~-l~L~~~E~~~l~~ 301 (312)
T cd05293 226 KLKGYTSWAI-GLSVADLVDA-ILRN-TGRVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIK-QPLTEEEQEKLQK 301 (312)
T ss_pred HhcCCchHHH-HHHHHHHHHH-HHcC-CCeEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEec-CCCCHHHHHHHHH
Confidence 9999777665 5689997776 5566 89999999999999999999999999997 999999998 9999999999999
Q ss_pred HHHHHHHHHH
Q 020022 316 TAEELSEEKA 325 (332)
Q Consensus 316 s~~~i~~~~~ 325 (332)
|++.|++.++
T Consensus 302 s~~~i~~~~~ 311 (312)
T cd05293 302 SADTLWEVQK 311 (312)
T ss_pred HHHHHHHHhh
Confidence 9999998765
No 18
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=1.9e-64 Score=465.55 Aligned_cols=304 Identities=37% Similarity=0.639 Sum_probs=267.8
Q ss_pred HHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHH
Q 020022 23 PMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDV 102 (332)
Q Consensus 23 ~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~ 102 (332)
+.|+.+++|| ++++.++|+|+++++++++|+++||.|+.++.......+++.+++++|||+||++||.|+++|++|.++
T Consensus 3 ~~~~~g~~~g-~~~~~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~dl 81 (313)
T TIGR01756 3 HWIANGDLYG-NRPVCLHLLEIPPALNRLEALAMELEDCAFPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRADL 81 (313)
T ss_pred ceeccCcccC-CCeEEEEEecCCCccchhHhHHHHHHHhccccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHHHH
Confidence 4567778888 788899999999777899999999999984433333445666689999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH-HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeee
Q 020022 103 MSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK-EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKN 181 (332)
Q Consensus 103 ~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~-~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~ 181 (332)
+..|+++++++++.|.+++||++++|++|||+|+||++++ +. +|+|++.|++||.||++||+++||++++++|++|++
T Consensus 82 l~~N~~I~~~i~~~i~~~a~~~~ivivvtNPvDv~t~v~~~~~-sg~p~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~ 160 (313)
T TIGR01756 82 LTKNTPIFKATGEALSEYAKPTVKVLVIGNPVNTNCLVAMLHA-PKLSAENFSSLCMLDHNRAVSRIASKLKVPVDHIYH 160 (313)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCeEEEEeCCchHHHHHHHHHHc-CCCCHHHEEecccHHHHHHHHHHHHHhCcChhheee
Confidence 9999999999999999999877889999999999999995 65 899988889999999999999999999999999988
Q ss_pred eEEEeccCCceeecCCceeEecCCCCcchhhh--hhhcccchhHHHHHHHhhHHHHHHhcCccchHHHHHHHHHHHHHHH
Q 020022 182 VIIWGNHSSSQYPDVNHATVNTAAGEKPVREL--VKDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWV 259 (332)
Q Consensus 182 ~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~--~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~~~~a~~~~~~i~~~i 259 (332)
++||||||++|||+||+++|+. +|.|+..+ +. +.|..+++.+++++++++|+++||+|+|.++|.++++++++++
T Consensus 161 ~~V~GeHG~s~vp~~S~~~V~~--~G~~~~~~~~~~-~~~~~~~i~~~v~~~g~~Ii~~kg~t~~~~~a~ai~~iv~ail 237 (313)
T TIGR01756 161 VVVWGNHAESMVADLTHAEFTK--NGKHQKVFDELC-RDYPEPDFFEVIAQRAWKILEMRGFTSAASPVKASLQHMKAWL 237 (313)
T ss_pred eEEEECCCCceeecccccEEec--CCeehhHhhhcC-cHhHHHHHHHHHHHHHHHHHhCcCCcchHHHHHHHHHHHHHHh
Confidence 8779999999999999999964 78886544 32 2466689999999999999999999888877668999888766
Q ss_pred cCCCCceEEEeeeecC--CCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 020022 260 LGTPEGTWVSMGVYSD--GSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCL 331 (332)
Q Consensus 260 ~~~~~~~i~~~sv~~~--g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~~~~~ 331 (332)
.+.++++++|+|++++ |+||+|+|+++|+||++ ++|+++++++++|+++|+++|++|++.|+++.+.+...|
T Consensus 238 ~~~~~~~i~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l~L~~~E~~~l~~Sa~~l~~e~~~~~~~~ 312 (313)
T TIGR01756 238 FGTRPGEVLSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENFELNPWLKTKLAQTEKDLFEERETALKAL 312 (313)
T ss_pred cCCCCCeEEEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5323789999999985 39999889999999997 999999997789999999999999999999999987755
No 19
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=4.3e-63 Score=459.23 Aligned_cols=300 Identities=25% Similarity=0.405 Sum_probs=269.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
+||+||| +|.+|+++++.|+..++.. +|.|+|+++ +++++.++||+|..........+..+.++++++||+|
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~-----ei~l~D~~~--~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVNQGIAD-----ELVLIDINE--EKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIV 72 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--chhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEE
Confidence 4899999 6999999999999888655 899999985 6789999999998754444445555667889999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHHHH
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRA 164 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r~ 164 (332)
|+++|.++++|++|.+++.+|+++++++++.|++++ |++++|++|||+|++|++++++ +|+|++| |+.+|.||++|+
T Consensus 73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~-~~~~vivvsNP~d~~~~~~~~~-~g~p~~~v~g~gt~LDs~R~ 150 (306)
T cd05291 73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASG-FDGIFLVASNPVDVITYVVQKL-SGLPKNRVIGTGTSLDTARL 150 (306)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecChHHHHHHHHHHH-hCcCHHHEeeccchHHHHHH
Confidence 999999999999999999999999999999999999 5899999999999999999998 8999999 677899999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc---hhHHHHHHHhhHHHHHHhcCc
Q 020022 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL---NGEFITTVQQRGAAIIKARKL 241 (332)
Q Consensus 165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~---~~~~~~~v~~~~~~i~~~kg~ 241 (332)
++++|+++++++++|+++ |||+||+++||+||++++ +|.|+.+++.+..|. .+++.+++++++++|++.||+
T Consensus 151 ~~~la~~l~v~~~~v~~~-V~G~Hg~s~~~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~kg~ 225 (306)
T cd05291 151 RRALAEKLNVDPRSVHAY-VLGEHGDSQFVAWSTVTV----GGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIINGKGA 225 (306)
T ss_pred HHHHHHHHCCCcccceEE-EEecCCCceeecceeeEE----cCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHHccCc
Confidence 999999999999999986 699999999999999999 999999987654453 467889999999999999998
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHH
Q 020022 242 SSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEEL 320 (332)
Q Consensus 242 ~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i 320 (332)
++|.+ |.++++++.+ |..| +++++|+|++++|+|| ++|+|||+||++ ++|++++++ ++|+++|+++|++|+++|
T Consensus 226 t~~~~-a~a~~~~~~a-il~~-~~~v~~~s~~~~g~yg-~~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E~~~l~~s~~~l 300 (306)
T cd05291 226 TYYGI-ATALARIVKA-ILND-ENAILPVSAYLDGEYG-EKDVYIGVPAIIGRNGVEEVIE-LDLTEEEQEKFEKSADII 300 (306)
T ss_pred cHHHH-HHHHHHHHHH-HHcC-CCEEEEEEEEeccccC-CCCEEEEEEEEEeCCCEEEEEC-CCCCHHHHHHHHHHHHHH
Confidence 77665 4588998776 5566 8999999999999999 489999999997 999999998 999999999999999999
Q ss_pred HHHHH
Q 020022 321 SEEKA 325 (332)
Q Consensus 321 ~~~~~ 325 (332)
++.++
T Consensus 301 ~~~~~ 305 (306)
T cd05291 301 KENIK 305 (306)
T ss_pred HHHhh
Confidence 98865
No 20
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=1.5e-62 Score=453.72 Aligned_cols=296 Identities=25% Similarity=0.373 Sum_probs=267.1
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-cceEeeCChhhhcCCCcEEE
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGVNIAV 86 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~~~~~~~~~~~al~~aDiVi 86 (332)
|+||| +|.||+++++.|+..++++ ||+|+|+++ ++++++++||+|+..+.. .++..+ +.++++++||+||
T Consensus 1 i~iiG-aG~VG~~~a~~l~~~~~~~-----el~l~D~~~--~~~~g~~~DL~~~~~~~~~~~i~~~-~~~~~l~~aDiVI 71 (300)
T cd00300 1 ITIIG-AGNVGAAVAFALIAKGLAS-----ELVLVDVNE--EKAKGDALDLSHASAFLATGTIVRG-GDYADAADADIVV 71 (300)
T ss_pred CEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEEeCCc--cHHHHHHHhHHHhccccCCCeEEEC-CCHHHhCCCCEEE
Confidence 68999 6999999999999988876 899999984 788999999999876532 233333 4478999999999
Q ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHHHHH
Q 020022 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRAL 165 (332)
Q Consensus 87 ~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r~~ 165 (332)
+++|.|++++++|.+++.+|+++++++++.|+++| |++++|++|||+|+++++++++ +|+|++|+ +.+|.+||.|++
T Consensus 72 itag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~-p~~~viv~sNP~d~~~~~~~~~-sg~~~~kviG~gt~lDs~r~~ 149 (300)
T cd00300 72 ITAGAPRKPGETRLDLINRNAPILRSVITNLKKYG-PDAIILVVSNPVDILTYVAQKL-SGLPKNRVIGSGTLLDSARFR 149 (300)
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccChHHHHHHHHHHH-hCcCHHHEEecCCcHHHHHHH
Confidence 99999999999999999999999999999999999 6899999999999999999998 68999995 556999999999
Q ss_pred HHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccchH
Q 020022 166 GQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSAL 245 (332)
Q Consensus 166 ~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~~ 245 (332)
+++|+++++++++|++++ +||||+++||+||++++ +|.|+.+++++++|..+++.+++++++++|++.||+++|.
T Consensus 150 ~~la~~l~v~~~~v~~~v-iGeHg~s~v~~~S~~~v----~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~~kg~t~~~ 224 (300)
T cd00300 150 SLLAEKLDVDPQSVHAYV-LGEHGDSQVVAWSTATV----GGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRLKGATNYG 224 (300)
T ss_pred HHHHHHhCCCcccEEEEE-EeccCCceeeeeeeeEE----CCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHccCcchHH
Confidence 999999999999999885 79999999999999999 9999999887666777899999999999999999987764
Q ss_pred HHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 020022 246 SAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 324 (332)
Q Consensus 246 ~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~ 324 (332)
+|.++++++.+ +.+| +++++|+|++++|+|| ++++|||+||++ ++|++++++ ++|+++|+++|++|++.|++.+
T Consensus 225 -~a~a~~~~~~a-i~~~-~~~v~~~s~~~~g~yg-~~~~~~s~Pv~ig~~Gi~~i~~-l~L~~~E~~~l~~s~~~l~~~~ 299 (300)
T cd00300 225 -IATAIADIVKS-ILLD-ERRVLPVSAVQEGQYG-IEDVALSVPAVVGREGVVRILE-IPLTEDEEAKLQKSAEALKEVL 299 (300)
T ss_pred -HHHHHHHHHHH-HHcC-CCeEEEEEEEecCccC-CCCEEEEEEEEEeCCCeEEEec-CCCCHHHHHHHHHHHHHHHHHh
Confidence 56789998876 5556 8999999999999999 489999999997 999999997 9999999999999999999765
No 21
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=6.7e-62 Score=415.35 Aligned_cols=330 Identities=75% Similarity=1.188 Sum_probs=318.5
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a 82 (332)
.++.+|.|+||+|.+|+++++.++.+-++++++++.++|+|+.+....|+|..|+|+|+++|+...+..+++..++++|.
T Consensus 2 ~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvattd~~~afkdv 81 (332)
T KOG1496|consen 2 KEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATTDEVEAFKDV 81 (332)
T ss_pred CCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhcccChhhhhccC
Confidence 45789999999999999999999999999999999999999998778899999999999999999999999999999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHH
Q 020022 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHN 162 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~ 162 (332)
|+.|..++.||++|++|.|++..|++|++.-+..+++|+.|+++|+++.||++..+.++.++++.+|.++|...|.||..
T Consensus 82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~k~ApsIP~kNfs~lTRLDhN 161 (332)
T KOG1496|consen 82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILKKFAPSIPEKNFSALTRLDHN 161 (332)
T ss_pred cEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHhhhCCCCchhcchhhhhhchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~ 242 (332)
|...++|.++|+..++|.+++|||+|+.+|+|+..+++|+...+.+|+.+.+.+..|+..+|.+.|+++|..+++.++.+
T Consensus 162 RA~~QlA~klgv~~~~VkNviIWGNHSsTQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~ark~S 241 (332)
T KOG1496|consen 162 RALAQLALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIKARKLS 241 (332)
T ss_pred hHHHHHHHhhCCchhhcceeEEecccccccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhhhhhhh
Confidence 99999999999999999999999999999999999999966556789999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEecCCcEEEecCCCCCHHHHHHHHHHHHHHHH
Q 020022 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSE 322 (332)
Q Consensus 243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~ 322 (332)
+.+++|.++++.|++|+.+.|++++++++|+++|.||+|.|..||+||+.++|-|+++++++++++-++++..++++|.+
T Consensus 242 SA~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDGsYgip~gli~SfPv~~k~g~wkiVqgl~iddf~r~km~~t~~EL~e 321 (332)
T KOG1496|consen 242 SAMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDGSYGIPDGLIFSFPVTIKNGDWKIVQGLPIDDFSREKMDLTAKELKE 321 (332)
T ss_pred hhhhHHHhHhhhhhheecCCCCccEEEEeeecCCCCCCCCCeEEEcceEecCCceEEEcCcchhHHHHHhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhC
Q 020022 323 EKALAYSCLS 332 (332)
Q Consensus 323 ~~~~~~~~~~ 332 (332)
+.+.+++||+
T Consensus 322 Ekd~a~~~l~ 331 (332)
T KOG1496|consen 322 EKDLAYSCLS 331 (332)
T ss_pred hHHHHHHhhc
Confidence 9999999985
No 22
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-60 Score=443.71 Aligned_cols=305 Identities=25% Similarity=0.375 Sum_probs=266.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCcc--ceEeeCChhhhcCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVATTDAVEACTG 81 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~--~~~~~~~~~~al~~ 81 (332)
+.+||+||| +|+||+++++.++..++ . +|+|+|+++ +++++.++|+.|....... +++.+ +.+++++|
T Consensus 4 ~~~KI~IIG-aG~vG~~ia~~l~~~~~-~-----~l~L~Di~~--~~~~g~~lDl~~~~~~~~~~~~i~~~-~d~~~l~~ 73 (319)
T PTZ00117 4 KRKKISMIG-AGQIGSTVALLILQKNL-G-----DVVLYDVIK--GVPQGKALDLKHFSTLVGSNINILGT-NNYEDIKD 73 (319)
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHHCCC-C-----eEEEEECCC--ccchhHHHHHhhhccccCCCeEEEeC-CCHHHhCC
Confidence 457999999 59999999999998875 4 799999985 5678899999998643332 33433 45669999
Q ss_pred CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHH
Q 020022 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLD 160 (332)
Q Consensus 82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~ld 160 (332)
||+||+++|.+++++++|.|++..|.++++++++.|+++| |++++|++|||+|+++++++++ +++|++|+ +.+|.+|
T Consensus 74 ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~-p~a~vivvsNP~di~t~~~~~~-s~~p~~rviG~gt~ld 151 (319)
T PTZ00117 74 SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC-PNAFVICVTNPLDCMVKVFQEK-SGIPSNKICGMAGVLD 151 (319)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecChHHHHHHHHHHh-hCCCcccEEEecchHH
Confidence 9999999999999999999999999999999999999999 5799999999999999999998 69998885 5567999
Q ss_pred HHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccc---hhHHHHHHHhhHHHHHH
Q 020022 161 HNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWL---NGEFITTVQQRGAAIIK 237 (332)
Q Consensus 161 s~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~---~~~~~~~v~~~~~~i~~ 237 (332)
++|+++++|++++++|++|++++ +||||+++||+||++++ +|+|+.+++.++.|. .+++.+++++++++|++
T Consensus 152 s~R~~~~la~~l~v~~~~v~~~v-iGeHg~~~v~~~s~~~v----~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~ 226 (319)
T PTZ00117 152 SSRFRCNLAEKLGVSPGDVSAVV-IGGHGDLMVPLPRYCTV----NGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVK 226 (319)
T ss_pred HHHHHHHHHHHhCCCcccceEEE-eecCCCcEEeceeeceE----CCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999885 79999999999999999 999999987554343 35788899999999999
Q ss_pred h--cCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022 238 A--RKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD 314 (332)
Q Consensus 238 ~--kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~ 314 (332)
. ||++ ++++|.++++++.+ |.+| +++++|+|++++|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|+
T Consensus 227 ~~~kg~t-~~~~a~a~~~~~~a-il~~-~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-l~l~~~E~~~l~ 301 (319)
T PTZ00117 227 LLKKGSA-FFAPAAAIVAMIEA-YLKD-EKRVLVCSVYLNGQYNC-KNLFVGVPVVIGGKGIEKVIE-LELNAEEKELFD 301 (319)
T ss_pred hcCCCCh-HHHHHHHHHHHHHH-HhcC-CCeEEEEEEEeccccCC-CCeEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHH
Confidence 6 6644 45667789998776 5566 79999999999999999 49999999997 999999998 999999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 020022 315 LTAEELSEEKALAYSC 330 (332)
Q Consensus 315 ~s~~~i~~~~~~~~~~ 330 (332)
+|++.|++.++.+...
T Consensus 302 ~s~~~l~~~~~~~~~~ 317 (319)
T PTZ00117 302 KSIESIQELTQKAKAL 317 (319)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999877654
No 23
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=6e-61 Score=442.09 Aligned_cols=296 Identities=24% Similarity=0.335 Sum_probs=254.0
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC---ChhhhcCCCc
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT---DAVEACTGVN 83 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~---~~~~al~~aD 83 (332)
||+||||+|+||+++++.|+..++.+ |++|+|+++ +.|+++||+|... ..+++.++ +.+++++|||
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~-----elvL~Di~~----a~g~a~DL~~~~~--~~~i~~~~~~~~~~~~~~daD 69 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVS-----ELSLYDIAG----AAGVAADLSHIPT--AASVKGFSGEEGLENALKGAD 69 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEecCCC----CcEEEchhhcCCc--CceEEEecCCCchHHHcCCCC
Confidence 79999966999999999999887765 899999984 6789999999762 23444422 3489999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc----hHHHHHHhCCCCCCCcEEEechH
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT----NALILKEFAPSIPAKNITCLTRL 159 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~----~~~~~~~~~~~~~~~~i~~~t~l 159 (332)
+||+++|.+++++++|++++..|+++++++++.|.+++ |++++|++|||+|+ +|+++++. +|+|++|++|.|.|
T Consensus 70 ivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~-p~~iiivvsNPvDv~~~i~t~~~~~~-sg~p~~rViG~g~L 147 (312)
T TIGR01772 70 VVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESC-PKAMILVITNPVNSTVPIAAEVLKKK-GVYDPNKLFGVTTL 147 (312)
T ss_pred EEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhC-CCeEEEEecCchhhHHHHHHHHHHHh-cCCChHHEEeeecc
Confidence 99999999999999999999999999999999999998 68999999999998 88889888 79999997666679
Q ss_pred HHHHHHHHHHHHcCCCCCCeeeeEEEeccCC-ceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHh
Q 020022 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA 238 (332)
Q Consensus 160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~-~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~ 238 (332)
|++||++++|++++++|++|++++ |||||+ +|||+||++++ . ++ +.++. .+++.+++++++++|++.
T Consensus 148 DsaR~r~~la~~l~v~~~~v~~~V-iGeHg~~s~vp~~S~~~~----~--~~---~~~~~--~~~i~~~v~~~g~~Ii~~ 215 (312)
T TIGR01772 148 DIVRANTFVAELKGKDPMEVNVPV-IGGHSGETIIPLISQCPG----K--VL---FTEDQ--LEALIHRIQNAGTEVVKA 215 (312)
T ss_pred hHHHHHHHHHHHhCCCHHHeEEEE-EEecCCCccccccccccc----c--CC---CCHHH--HHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999774 899997 99999999986 2 22 22222 368999999999999997
Q ss_pred c---CccchHHHHHHHHHHHHHHHc--CCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHHH
Q 020022 239 R---KLSSALSAASSACDHIRDWVL--GTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSRK 311 (332)
Q Consensus 239 k---g~~~~~~~a~~~~~~i~~~i~--~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~~ 311 (332)
| |+ +++++|.++++++.+.+. .| ++.++|+ ++++|+||. +|+|+|+||++ ++|++++++ + +|+++|++
T Consensus 216 k~gkg~-t~~~ia~a~~~iv~ail~~~~d-~~~v~~~-s~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~ 290 (312)
T TIGR01772 216 KAGAGS-ATLSMAFAGARFVLSLVRGLKG-EEGVVEC-AYVESDGVT-EATFFATPLLLGKNGVEKRLG-IGKLSSFEEK 290 (312)
T ss_pred ccCCCC-hhHHHHHHHHHHHHHHHHhhCC-CccEEEE-EEEccCCCc-CceEEEEEEEEcCCeeEEEEc-cCCCCHHHHH
Confidence 4 54 445667788887665332 35 7899995 589999997 89999999997 999999998 8 89999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhC
Q 020022 312 KLDLTAEELSEEKALAYSCLS 332 (332)
Q Consensus 312 ~l~~s~~~i~~~~~~~~~~~~ 332 (332)
+|++|++.|++.++.+++|.+
T Consensus 291 ~l~~S~~~i~~~~~~g~~~~~ 311 (312)
T TIGR01772 291 MLNGALPELKKNIKKGEEFVA 311 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999874
No 24
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=2.7e-60 Score=441.20 Aligned_cols=304 Identities=23% Similarity=0.373 Sum_probs=264.1
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeCChhh
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVE 77 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~~~~~ 77 (332)
|.| +.+||+||| +|.||+++++.++..++ . +++|+|+++ +++++.++|+.|...... .++..++ .++
T Consensus 1 ~~~~~~~KI~IIG-aG~vG~~ia~~la~~gl-~-----~i~LvDi~~--~~~~~~~ld~~~~~~~~~~~~~I~~~~-d~~ 70 (321)
T PTZ00082 1 MTMIKRRKISLIG-SGNIGGVMAYLIVLKNL-G-----DVVLFDIVK--NIPQGKALDISHSNVIAGSNSKVIGTN-NYE 70 (321)
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHhCCC-C-----eEEEEeCCC--chhhHHHHHHHhhhhccCCCeEEEECC-CHH
Confidence 555 457999999 69999999999988775 2 699999985 557888999999754332 3444434 468
Q ss_pred hcCCCcEEEEeCCCCCCCCC-----CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc
Q 020022 78 ACTGVNIAVMVGGFPRKEGM-----ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN 152 (332)
Q Consensus 78 al~~aDiVi~~ag~~~~~~~-----~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~ 152 (332)
+++|||+||+++|.++++++ +|.+++..|+++++++++.|+++| |++++|++|||+|++++.++++ +++|++|
T Consensus 71 ~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~-p~a~~iv~sNP~di~t~~~~~~-sg~p~~r 148 (321)
T PTZ00082 71 DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC-PNAFVIVITNPLDVMVKLLQEH-SGLPKNK 148 (321)
T ss_pred HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHh-cCCChhh
Confidence 99999999999999999999 999999999999999999999999 5789999999999999999998 7999888
Q ss_pred E-EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhccc---chhHHHHHH
Q 020022 153 I-TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAW---LNGEFITTV 228 (332)
Q Consensus 153 i-~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~---~~~~~~~~v 228 (332)
+ +.+|.+|+.|+++++|+++++++++|++++ +||||+++||+||++++ +|.|+.++++.+.+ ..+++.+++
T Consensus 149 viGlgt~lds~R~~~~la~~l~v~~~~v~~~v-iGeHg~s~v~~~S~~~i----~g~~~~~~~~~~~~~~~~~~~i~~~~ 223 (321)
T PTZ00082 149 VCGMAGVLDSSRLRTYIAEKLGVNPRDVHASV-IGAHGDKMVPLPRYVTV----GGIPLSEFIKKGLITQEEIDEIVERT 223 (321)
T ss_pred EEEecCcccHHHHHHHHHHHhCCCcccceeeE-EecCCCceEecceeeEE----CCEEHHHhhhcccCCHHHHHHHHHHH
Confidence 5 566799999999999999999999999885 79999999999999999 99999988643211 136789999
Q ss_pred HhhHHHHHHh--cCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCC
Q 020022 229 QQRGAAIIKA--RKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSI 305 (332)
Q Consensus 229 ~~~~~~i~~~--kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l 305 (332)
++++++|++. ||++. +++|.++++++.+ |+.| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|
T Consensus 224 ~~~g~~i~~~~gkg~t~-~~ia~a~~~i~~a-il~d-~~~v~~vs~~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l 298 (321)
T PTZ00082 224 RNTGKEIVDLLGTGSAY-FAPAAAAIEMAEA-YLKD-KKRVLPCSAYLEGQYGH-KDIYMGTPAVIGANGVEKIIE-LDL 298 (321)
T ss_pred HHHHHHHHhhcCCCccH-HHHHHHHHHHHHH-HHcC-CCcEEEEEEEecccCCC-CCeEEEEEEEEeCCeEEEEeC-CCC
Confidence 9999999996 45444 5667788997765 6667 89999999999999999 79999999987 999999998 999
Q ss_pred CHHHHHHHHHHHHHHHHHHHH
Q 020022 306 DEFSRKKLDLTAEELSEEKAL 326 (332)
Q Consensus 306 ~~~E~~~l~~s~~~i~~~~~~ 326 (332)
+++|+++|++|++.|++.++.
T Consensus 299 ~~~E~~~l~~sa~~i~~~~~~ 319 (321)
T PTZ00082 299 TPEEQKKFDESIKEVKRLEAL 319 (321)
T ss_pred CHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999988764
No 25
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.9e-60 Score=437.95 Aligned_cols=295 Identities=24% Similarity=0.355 Sum_probs=251.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee---CChhhhcCCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT---TDAVEACTGV 82 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~---~~~~~al~~a 82 (332)
|||+||||+|+||+++++.|+..++.+ ||+|+|++ +++|+++||+|+.. ...++.. ++.+++++||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~-----elvLiDi~----~a~g~alDL~~~~~--~~~i~~~~~~~~~y~~~~da 69 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIV----NTPGVAADLSHINT--PAKVTGYLGPEELKKALKGA 69 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCc-----EEEEEecC----ccceeehHhHhCCC--cceEEEecCCCchHHhcCCC
Confidence 599999966999999999999888766 99999997 67999999999873 2344432 2348999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch----HHHHHHhCCCCCCCcEEEech
Q 020022 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN----ALILKEFAPSIPAKNITCLTR 158 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~----~~~~~~~~~~~~~~~i~~~t~ 158 (332)
|+||++||.|+++|++|.|++..|+++++++++.|.+++ |++++|++|||+|+| +++++++ +++|++|++|.|.
T Consensus 70 DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvDv~~~i~t~~~~~~-s~~p~~rviG~~~ 147 (310)
T cd01337 70 DVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKAC-PKALILIISNPVNSTVPIAAEVLKKA-GVYDPKRLFGVTT 147 (310)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchhhHHHHHHHHHHHh-cCCCHHHEEeeec
Confidence 999999999999999999999999999999999999998 589999999999997 8888887 7999999767678
Q ss_pred HHHHHHHHHHHHHcCCCCCCeeeeEEEecc-CCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH
Q 020022 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNH-SSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237 (332)
Q Consensus 159 lds~r~~~~la~~l~v~~~~v~~~~v~G~h-g~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (332)
|||+|+++++|+++|+++++|+++ ||||| |++|||+||++.+ . .++ .++. .+++.+++++++++|++
T Consensus 148 LDs~R~~~~la~~l~v~~~~V~~~-v~GeHsGds~vp~~S~~~~----~----~~~-~~~~--~~~i~~~v~~~g~~Ii~ 215 (310)
T cd01337 148 LDVVRANTFVAELLGLDPAKVNVP-VIGGHSGVTILPLLSQCQP----P----FTF-DQEE--IEALTHRIQFGGDEVVK 215 (310)
T ss_pred hHHHHHHHHHHHHhCcCHHHEEEE-EEecCCCCceecccccccc----c----ccC-CHHH--HHHHHHHHHHHHHHHHh
Confidence 999999999999999999999977 58999 8999999999987 2 111 2221 46899999999999999
Q ss_pred hc---CccchHHHHHHHHHHHHHHHc--CCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHH
Q 020022 238 AR---KLSSALSAASSACDHIRDWVL--GTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSR 310 (332)
Q Consensus 238 ~k---g~~~~~~~a~~~~~~i~~~i~--~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~ 310 (332)
.| |+ +++++|.++++++.+++. .+ ++.+++++ +.+|+ |. +|+|+|+||++ ++|++++++ + +|+++|+
T Consensus 216 ~k~gkg~-t~~~~a~a~~~iv~aIl~~~~~-~~~~~~~s-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~~-l~~L~~~E~ 289 (310)
T cd01337 216 AKAGAGS-ATLSMAYAGARFANSLLRGLKG-EKGVIECA-YVESD-VT-EAPFFATPVELGKNGVEKNLG-LGKLNDYEK 289 (310)
T ss_pred CccCCCC-cchhHHHHHHHHHHHHHHhcCC-CcceEEEE-EEecc-CC-CceEEEEEEEEeCCeEEEEeC-CCCCCHHHH
Confidence 85 54 445667789998876542 23 45677777 66665 75 79999999997 999999998 8 6999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhh
Q 020022 311 KKLDLTAEELSEEKALAYSCL 331 (332)
Q Consensus 311 ~~l~~s~~~i~~~~~~~~~~~ 331 (332)
++|++|++.|++.++...+|.
T Consensus 290 ~~l~~S~~~i~~~~~~g~~~~ 310 (310)
T cd01337 290 KLLEAALPELKKNIEKGVDFV 310 (310)
T ss_pred HHHHHHHHHHHHHHhhhcccC
Confidence 999999999999999988874
No 26
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=5.1e-60 Score=438.41 Aligned_cols=300 Identities=23% Similarity=0.343 Sum_probs=266.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||+||| +|.||+++++.|+..++.. +++|+|+++ +++++.++|+.|... ......+.++.++++++||+|
T Consensus 1 mkI~IIG-aG~VG~~~a~~l~~~g~~~-----ev~l~D~~~--~~~~g~a~dl~~~~~-~~~~~~i~~~d~~~l~~aDiV 71 (308)
T cd05292 1 MKVAIVG-AGFVGSTTAYALLLRGLAS-----EIVLVDINK--AKAEGEAMDLAHGTP-FVKPVRIYAGDYADCKGADVV 71 (308)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCC-----EEEEEECCc--hhhhhHHHHHHcccc-ccCCeEEeeCCHHHhCCCCEE
Confidence 4899999 6999999999999988655 899999984 677889999998753 222334445667899999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHHHH
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRA 164 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~r~ 164 (332)
|+++|.+++++++|.+++..|+++++++++.|++++ |+++++++|||+|+++++++++ +|+|++| |+.||.||++|+
T Consensus 72 iita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~-~~giiiv~tNP~d~~~~~~~~~-sg~p~~~viG~gt~LDs~R~ 149 (308)
T cd05292 72 VITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYA-PDAILLVVTNPVDVLTYVAYKL-SGLPPNRVIGSGTVLDTARF 149 (308)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-HCcCHHHeecccchhhHHHH
Confidence 999999999999999999999999999999999999 5799999999999999999999 6999999 577899999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhc--c---cchhHHHHHHHhhHHHHHHhc
Q 020022 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDD--A---WLNGEFITTVQQRGAAIIKAR 239 (332)
Q Consensus 165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~--~---~~~~~~~~~v~~~~~~i~~~k 239 (332)
++++|+++++++.+|+++ ||||||+++||+||+++| +|+|+.+++.+. . +..+++.+++++++++|++.|
T Consensus 150 ~~~la~~~~v~~~~v~~~-viGeHg~~~~~~~S~~~v----~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~k 224 (308)
T cd05292 150 RYLLGEHLGVDPRSVHAY-IIGEHGDSEVAVWSSANI----GGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIERK 224 (308)
T ss_pred HHHHHHHhCCCccceece-eeccCCCcEEecceeeeE----CCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999988 589999999999999999 999999886541 1 224679999999999999999
Q ss_pred CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022 240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE 318 (332)
Q Consensus 240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~ 318 (332)
|+++|.+ |.++++++.+ |..| +++++|+|++++|+||+ +++|+|+||++ ++|++++++ ++|+++|+++|++|++
T Consensus 225 g~t~~~~-a~a~~~i~~a-il~~-~~~v~~~s~~~~g~yg~-~~~~~s~P~~ig~~Gv~~i~~-~~L~~~E~~~l~~s~~ 299 (308)
T cd05292 225 GATYYAI-GLALARIVEA-ILRD-ENSVLTVSSLLDGQYGI-KDVALSLPCIVGRSGVERVLP-PPLSEEEEEALRASAE 299 (308)
T ss_pred CccHHHH-HHHHHHHHHH-HHcC-CCcEEEEEEEEcccCCC-CCEEEEEEEEEeCCceEEecC-CCCCHHHHHHHHHHHH
Confidence 9877655 5688997765 6667 89999999999999998 79999999997 999999998 9999999999999999
Q ss_pred HHHHHHHH
Q 020022 319 ELSEEKAL 326 (332)
Q Consensus 319 ~i~~~~~~ 326 (332)
.|++.++.
T Consensus 300 ~i~~~~~~ 307 (308)
T cd05292 300 VLKEAIES 307 (308)
T ss_pred HHHHHHhh
Confidence 99988763
No 27
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=7.2e-60 Score=437.08 Aligned_cols=303 Identities=25% Similarity=0.414 Sum_probs=268.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeCChhhhcCCCc
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGVN 83 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~~~~~al~~aD 83 (332)
|||+|+||+|.+|++++..|+..++.+ +|+|+|+++..+++++.++|+.|...... .+++.+++ ++++++||
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~-----~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aD 74 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVK-----EINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSD 74 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCC-----EEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCC
Confidence 599999977999999999999988765 89999996544788999999998643322 24444444 77899999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc-EEEechHHHH
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHN 162 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~-i~~~t~lds~ 162 (332)
+||+++|.|++++++|.+++..|+++++++++.|.+++ |++++|+++||+|++|++++++ +|+|++| |+.+|.|||+
T Consensus 75 iViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~npvd~~t~~~~~~-~g~~~~~viG~gt~LDs~ 152 (309)
T cd05294 75 IVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNPVDVMTYKALKE-SGFDKNRVFGLGTHLDSL 152 (309)
T ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHh-cCCCHHHEeeccchHHHH
Confidence 99999999999999999999999999999999999999 5799999999999999999998 6899998 5667999999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCcc
Q 020022 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLS 242 (332)
Q Consensus 163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~ 242 (332)
|++++||+++++++++|++++ +||||++|||+||++++ +|.|+.++++.+.+..+++.+++++++++|++.||++
T Consensus 153 R~~~~la~~l~v~~~~v~~~v-iGeHg~s~~~~~S~~~i----~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~kg~t 227 (309)
T cd05294 153 RFKVAIAKHFNVHISEVHTRI-IGEHGDSMVPLISSTSI----GGIPIKRFPEYKDFDVEKIVETVKNAGQNIISLKGGS 227 (309)
T ss_pred HHHHHHHHHHCcChHHeEEEE-EecCCCceEeeeeecEE----CCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999885 79999999999999999 9999998865333445789999999999999999987
Q ss_pred chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCC-CCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHH
Q 020022 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEEL 320 (332)
Q Consensus 243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~y-gi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i 320 (332)
.| ++|.++++++.+ +.+| ++.++|+|++++|+| |++ |+++|+||++ ++|++++++ ++|+++|+++|++|++.|
T Consensus 228 ~~-~~a~~~~~ii~a-il~~-~~~v~~vsv~~~g~~~~~~-~~~~svP~~ig~~Gv~~i~~-l~l~~~E~~~l~~s~~~i 302 (309)
T cd05294 228 EY-GPASAISNLVRT-IAND-ERRILTVSTYLEGEIDGIR-DVCIGVPVKLGKNGIEEIVP-IEMDDDEREAFRKSAEIV 302 (309)
T ss_pred hh-hHHHHHHHHHHH-HHCC-CCeEEEEEEEECCccCCCC-CeEEEeEEEEcCCccEEEeC-CCCCHHHHHHHHHHHHHH
Confidence 65 566788997765 6677 899999999999997 996 9999999997 999999998 999999999999999999
Q ss_pred HHHHHH
Q 020022 321 SEEKAL 326 (332)
Q Consensus 321 ~~~~~~ 326 (332)
++.++.
T Consensus 303 ~~~~~~ 308 (309)
T cd05294 303 KKYTRE 308 (309)
T ss_pred HHHHhc
Confidence 987653
No 28
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=7.2e-60 Score=436.05 Aligned_cols=297 Identities=25% Similarity=0.383 Sum_probs=260.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--ccceEeeCChhhhcCCCc
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--LKGVVATTDAVEACTGVN 83 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--~~~~~~~~~~~~al~~aD 83 (332)
+||+||| +|.||+.+|+.++..+.. +++|+|+++ +..++.++|+.|..... ..+++.+++ ++++++||
T Consensus 2 ~KV~VIG-aG~vG~~iA~~la~~g~~------~VvlvDi~~--~l~~g~a~d~~~~~~~~~~~~~i~~t~d-~~~~~~aD 71 (305)
T TIGR01763 2 KKISVIG-AGFVGATTAFRLAEKELA------DLVLLDVVE--GIPQGKALDMYEASPVGGFDTKVTGTNN-YADTANSD 71 (305)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHcCCC------eEEEEeCCC--ChhHHHHHhhhhhhhccCCCcEEEecCC-HHHhCCCC
Confidence 5999999 699999999999987642 699999974 56677888888765322 235555555 45699999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHH
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHN 162 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~ 162 (332)
+||+++|.|++++++|.+++..|++++++++++|.+++ |++++|++|||+|++|++++++ +|+|++|+ +.+|.|||+
T Consensus 72 iVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~-p~~~iIv~tNP~di~t~~~~~~-sg~~~~rviG~g~~lds~ 149 (305)
T TIGR01763 72 IVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHS-PNPIIVVVSNPLDAMTYVAWQK-SGFPKERVIGQAGVLDSA 149 (305)
T ss_pred EEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-HCcCHHHEEEeccchHHH
Confidence 99999999999999999999999999999999999998 6799999999999999999998 79999995 666799999
Q ss_pred HHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHh--cC
Q 020022 163 RALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA--RK 240 (332)
Q Consensus 163 r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~--kg 240 (332)
|+++++|+++++++++|++++ |||||+++||+||++++ +|+|+.+++.++. .+++.+++++++++|++. ||
T Consensus 150 R~~~~la~~l~v~~~~v~~~v-~GeHg~s~~~~wS~~~i----~g~~~~~~~~~~~--~~~l~~~v~~~g~~ii~~~~kg 222 (305)
T TIGR01763 150 RFRTFIAMELGVSVQDVTACV-LGGHGDAMVPLVRYSTV----AGIPVADLISAER--IAEIVERTRKGGGEIVNLLKQG 222 (305)
T ss_pred HHHHHHHHHhCcCHHHeeeeE-EecCCCcEEeeeeeeEE----CCEEHHHhcCHHH--HHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999884 89999999999999999 9999999875543 368999999999999997 55
Q ss_pred ccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHH
Q 020022 241 LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEE 319 (332)
Q Consensus 241 ~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~ 319 (332)
++. +++|.++++++ +++++| +++++|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.
T Consensus 223 ~t~-~~~a~~~~~i~-~ai~~~-~~~v~~~s~~~~~~yg~-~~v~~s~P~~ig~~Gv~~i~~-~~l~~~E~~~l~~s~~~ 297 (305)
T TIGR01763 223 SAY-YAPAASVVEMV-EAILKD-RKRVLPCAAYLDGQYGI-DGIYVGVPVILGKNGVEHIYE-LKLDQSELALLNKSAKI 297 (305)
T ss_pred ChH-HHHHHHHHHHH-HHHhCC-CCeEEEEEEEecccCCC-CceEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHH
Confidence 555 45566788865 468888 89999999999999999 79999999997 999999998 99999999999999999
Q ss_pred HHHHHHH
Q 020022 320 LSEEKAL 326 (332)
Q Consensus 320 i~~~~~~ 326 (332)
|++.++.
T Consensus 298 i~~~~~~ 304 (305)
T TIGR01763 298 VDENCKM 304 (305)
T ss_pred HHHHHhc
Confidence 9988753
No 29
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=6.5e-58 Score=423.10 Aligned_cols=299 Identities=23% Similarity=0.319 Sum_probs=255.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC---hhhhcC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD---AVEACT 80 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~---~~~al~ 80 (332)
++.||+||||+|+||+++++.|+..++.+ +++|+|++ +++++++||+|+.. ...+...++ .+++++
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~-----elvL~Di~----~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l~ 75 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVS-----ELSLYDIV----GAPGVAADLSHIDT--PAKVTGYADGELWEKALR 75 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCC-----EEEEEecC----CCcccccchhhcCc--CceEEEecCCCchHHHhC
Confidence 45799999977999999999999777655 89999993 46888999999764 223433322 289999
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH----HhCCCCCCCcEEEe
Q 020022 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK----EFAPSIPAKNITCL 156 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~----~~~~~~~~~~i~~~ 156 (332)
|||+||+++|.+++++++|.+++..|+++++++++.+++++ ++++++++|||+|+++++++ +. +++|+++++|.
T Consensus 76 gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~-sg~p~~~viG~ 153 (321)
T PTZ00325 76 GADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKKA-GVYDPRKLFGV 153 (321)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhhc-cCCChhheeec
Confidence 99999999999999999999999999999999999999998 57899999999999999995 65 79999997666
Q ss_pred chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC-ceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHH
Q 020022 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAI 235 (332)
Q Consensus 157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~-~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i 235 (332)
+.|||+||++++|++++++|++|+++ ||||||+ +|||+||++ |.|+. ++. .+++.+++++++++|
T Consensus 154 g~LDs~R~r~~la~~l~v~~~~V~~~-VlGeHGd~s~v~~~S~~-------g~~l~----~~~--~~~i~~~v~~~g~~I 219 (321)
T PTZ00325 154 TTLDVVRARKFVAEALGMNPYDVNVP-VVGGHSGVTIVPLLSQT-------GLSLP----EEQ--VEQITHRVQVGGDEV 219 (321)
T ss_pred hhHHHHHHHHHHHHHhCcChhheEEE-EEeecCCcccccchhcc-------CCCCC----HHH--HHHHHHHHHHHHHHH
Confidence 67999999999999999999999977 5899999 899999998 34542 222 368999999999999
Q ss_pred HHhcC--ccchHHHHHHHHHHHHHHHc--CCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHH
Q 020022 236 IKARK--LSSALSAASSACDHIRDWVL--GTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSR 310 (332)
Q Consensus 236 ~~~kg--~~~~~~~a~~~~~~i~~~i~--~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~ 310 (332)
++.|| +++++++|.++++++.+++. +| ++.++|++ +++|+||. +|+|+|+||++ ++|++++++.++|+++|+
T Consensus 220 i~~k~~kg~t~~g~a~a~~~i~~ail~~~~~-~~~v~~~~-~~~g~yg~-~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~ 296 (321)
T PTZ00325 220 VKAKEGAGSATLSMAYAAAEWSTSVLKALRG-DKGIVECA-FVESDMRP-ECPFFSSPVELGKEGVERVLPIGPLNAYEE 296 (321)
T ss_pred HhcccCCCCchHHHHHHHHHHHHHHHhhcCC-CCCeEEEE-EEecCCCC-CCeEEEEEEEEcCCeeEEEcCCCCCCHHHH
Confidence 99773 34555667789998876553 34 67888885 99999997 89999999997 999999986469999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhC
Q 020022 311 KKLDLTAEELSEEKALAYSCLS 332 (332)
Q Consensus 311 ~~l~~s~~~i~~~~~~~~~~~~ 332 (332)
++|++|++.|++.++.++.|.+
T Consensus 297 ~~l~~S~~~i~~~~~~~~~~~~ 318 (321)
T PTZ00325 297 ELLEAAVPDLKKNIEKGLEFAR 318 (321)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999874
No 30
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=6.2e-57 Score=418.92 Aligned_cols=299 Identities=25% Similarity=0.405 Sum_probs=261.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeCChhhhcCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGV 82 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~~~~~al~~a 82 (332)
++||+||| +|.||+++++.++..++ . +++|+|+++ +++++.++|+.|...... .+++.++ .++++++|
T Consensus 2 ~~KI~VIG-aG~vG~~ia~~la~~~~-----~-ev~L~D~~~--~~~~~~~~dl~~~~~~~~~~~~i~~~~-d~~~~~~a 71 (307)
T PRK06223 2 RKKISIIG-AGNVGATLAHLLALKEL-----G-DVVLFDIVE--GVPQGKALDIAEAAPVEGFDTKITGTN-DYEDIAGS 71 (307)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-----e-EEEEEECCC--chhHHHHHHHHhhhhhcCCCcEEEeCC-CHHHHCCC
Confidence 36999999 59999999999987654 1 799999974 677888999988754333 3444444 45789999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHH
Q 020022 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDH 161 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds 161 (332)
|+||+++|.|++++++|.+++.+|+++++++++.|++++ |++++|++|||+|++|++++++ +++|++|+ +.+|.+|+
T Consensus 72 DiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~d~~~~~~~~~-s~~~~~~viG~gt~lds 149 (307)
T PRK06223 72 DVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYA-PDAIVIVVTNPVDAMTYVALKE-SGFPKNRVIGMAGVLDS 149 (307)
T ss_pred CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCcccEEEeCCCcHH
Confidence 999999999999999999999999999999999999999 5789999999999999999998 69999995 55689999
Q ss_pred HHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHh--c
Q 020022 162 NRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA--R 239 (332)
Q Consensus 162 ~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~--k 239 (332)
+||+++||+++++++++|++++ +|+||++++|+||++++ +|.|+.+++.+ .| .+++.+.++++++++++. |
T Consensus 150 ~r~~~~la~~l~v~~~~v~~~v-iGehg~s~~p~~S~~~v----~g~~~~~~~~~-~~-~~~l~~~v~~~~~~ii~~~~k 222 (307)
T PRK06223 150 ARFRTFIAEELNVSVKDVTAFV-LGGHGDSMVPLVRYSTV----GGIPLEDLLSK-EK-LDEIVERTRKGGAEIVGLLKT 222 (307)
T ss_pred HHHHHHHHHHhCcChhhCcccE-EcCCCCcceEchhhCEE----CCEEHHHhCCh-HH-HHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999886 79999999999999999 99999988543 34 368999999999999996 6
Q ss_pred CccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022 240 KLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE 318 (332)
Q Consensus 240 g~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~ 318 (332)
|++. ++.|.++++++.+ ++.+ ++.++|+|++++|+||+ +|++||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus 223 g~t~-~~~A~~~~~ii~a-il~~-~~~~~~~~v~~~g~yg~-~~~~~s~P~~i~~~Gv~~i~~-~~l~~~e~~~l~~s~~ 297 (307)
T PRK06223 223 GSAY-YAPAASIAEMVEA-ILKD-KKRVLPCSAYLEGEYGV-KDVYVGVPVKLGKNGVEKIIE-LELDDEEKAAFDKSVE 297 (307)
T ss_pred CChh-HHHHHHHHHHHHH-HHcC-CCcEEEEEEEecCcCCC-CCeEEEeEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHH
Confidence 6554 4456678887765 6667 89999999999999999 89999999997 999999998 9999999999999999
Q ss_pred HHHHHHHHH
Q 020022 319 ELSEEKALA 327 (332)
Q Consensus 319 ~i~~~~~~~ 327 (332)
+|++.++..
T Consensus 298 ~l~~~~~~~ 306 (307)
T PRK06223 298 AVKKLIEAL 306 (307)
T ss_pred HHHHHHHhc
Confidence 999988753
No 31
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=9.4e-57 Score=416.01 Aligned_cols=293 Identities=26% Similarity=0.419 Sum_probs=256.8
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeCChhhhcCCCcEE
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~~~~~al~~aDiV 85 (332)
|+||| +|.||+.++..++..++. +|+|+|+++ +++++..+|+.|...... .+++.+++ ++++++||+|
T Consensus 1 I~IIG-aG~vG~~ia~~la~~~l~------eV~L~Di~e--~~~~g~~~dl~~~~~~~~~~~~I~~t~d-~~~l~dADiV 70 (300)
T cd01339 1 ISIIG-AGNVGATLAQLLALKELG------DVVLLDIVE--GLPQGKALDISQAAPILGSDTKVTGTND-YEDIAGSDVV 70 (300)
T ss_pred CEEEC-CCHHHHHHHHHHHhCCCc------EEEEEeCCC--cHHHHHHHHHHHhhhhcCCCeEEEEcCC-HHHhCCCCEE
Confidence 68999 599999999999877642 799999985 577888899988654332 34444444 6889999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechHHHHHH
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRLDHNRA 164 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~lds~r~ 164 (332)
|+++|.|++++++|.+++.+|++++++++++|+++| |++++|++|||+|+++++++++ +++|++|+ +.+|.+|++|+
T Consensus 71 Iit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~-p~~~iIv~sNP~di~t~~~~~~-s~~~~~rviGlgt~lds~r~ 148 (300)
T cd01339 71 VITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYA-PNAIVIVVTNPLDVMTYVAYKA-SGFPRNRVIGMAGVLDSARF 148 (300)
T ss_pred EEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCHHHEEEecchHHHHHH
Confidence 999999999999999999999999999999999999 5689999999999999999998 69999885 55679999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhc--Ccc
Q 020022 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKAR--KLS 242 (332)
Q Consensus 165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~k--g~~ 242 (332)
++++|+++++++++|++++ +|+||++++|+||++++ +|.|+.+++.++. .+++.+++++++++|++.| |++
T Consensus 149 ~~~la~~l~v~~~~v~~~v-~G~hg~~~~~~~s~~~v----~g~~~~~~~~~~~--~~~~~~~v~~~~~~ii~~k~~g~t 221 (300)
T cd01339 149 RYFIAEELGVSVKDVQAMV-LGGHGDTMVPLPRYSTV----GGIPLTELITKEE--IDEIVERTRNGGAEIVNLLKTGSA 221 (300)
T ss_pred HHHHHHHhCCCccceEEEE-EeCCCCcceecceecEE----CCEEHHHhcChHH--HHHHHHHHHHHHHHHHhhcCCCch
Confidence 9999999999999999886 79999999999999999 9999998876544 3789999999999999976 655
Q ss_pred chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHH
Q 020022 243 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELS 321 (332)
Q Consensus 243 ~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~ 321 (332)
+| ++|.++++++. ++++| ++.++|+|++++|+||++ |+|||+||++ ++|++++++ ++|+++|+++|++|++.|+
T Consensus 222 ~~-~~a~~~~~i~~-ail~~-~~~i~~~s~~~~g~yg~~-~~~~s~P~~ig~~G~~~~~~-l~l~~~E~~~l~~s~~~l~ 296 (300)
T cd01339 222 YY-APAAAIAEMVE-AILKD-KKRVLPCSAYLEGEYGIK-DIFVGVPVVLGKNGVEKIIE-LDLTDEEKEAFDKSVESVK 296 (300)
T ss_pred hH-HHHHHHHHHHH-HHHcC-CCcEEEEEEEeccccCCC-CeEEEEEEEEeCCeEEEEeC-CCCCHHHHHHHHHHHHHHH
Confidence 55 45667888665 46677 899999999999999995 9999999997 999999998 9999999999999999999
Q ss_pred HHH
Q 020022 322 EEK 324 (332)
Q Consensus 322 ~~~ 324 (332)
+.+
T Consensus 297 ~~~ 299 (300)
T cd01339 297 ELI 299 (300)
T ss_pred HHh
Confidence 865
No 32
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=8.7e-57 Score=415.91 Aligned_cols=292 Identities=27% Similarity=0.400 Sum_probs=248.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc-cceEeeCChhhhcCCCc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL-KGVVATTDAVEACTGVN 83 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~-~~~~~~~~~~~al~~aD 83 (332)
+.||+||||+|+||+++++.|+..++.+ |++|+|+++ ++++++||.|+..... ..+...++.+++++|||
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~-----el~L~Di~~----~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aD 88 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVS-----ELHLYDIAN----TPGVAADVSHINTPAQVRGFLGDDQLGDALKGAD 88 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCC-----EEEEEecCC----CCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCC
Confidence 5799999977999999999999888776 899999984 6888999999875321 11223445689999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc----chHHHHHHhCCCCCCCcEEEechH
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN----TNALILKEFAPSIPAKNITCLTRL 159 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~----~~~~~~~~~~~~~~~~~i~~~t~l 159 (332)
+||++||.+++++++|++++..|.++++++++.+++++ |+++++++|||+| ++++.+++. +++|+++++|.+.|
T Consensus 89 iVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~-s~~p~~~viG~~~L 166 (323)
T PLN00106 89 LVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKA-GVYDPKKLFGVTTL 166 (323)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHc-CCCCcceEEEEecc
Confidence 99999999999999999999999999999999999999 6899999999999 899999997 79999998777789
Q ss_pred HHHHHHHHHHHHcCCCCCCeeeeEEEeccCC-ceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHh
Q 020022 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKA 238 (332)
Q Consensus 160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~-~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~ 238 (332)
|++||++++|+++|+++.+|++++ +||||+ +|||+||++++ .. + +.++. .+++.+++++++++|++.
T Consensus 167 Ds~Rl~~~lA~~lgv~~~~V~~~V-iGeHg~~s~vp~~S~~~~----~~----~-~~~~~--~~~i~~~v~~~g~~Ii~~ 234 (323)
T PLN00106 167 DVVRANTFVAEKKGLDPADVDVPV-VGGHAGITILPLLSQATP----KV----S-FTDEE--IEALTKRIQNGGTEVVEA 234 (323)
T ss_pred hHHHHHHHHHHHhCCChhheEEEE-EEeCCCccEeeehhccee----cc----c-CCHHH--HHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999885 799965 99999999987 21 1 22222 368999999999999997
Q ss_pred c---CccchHHHHHHHHHHHHHHHcC--CCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHHH
Q 020022 239 R---KLSSALSAASSACDHIRDWVLG--TPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSRK 311 (332)
Q Consensus 239 k---g~~~~~~~a~~~~~~i~~~i~~--~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~~ 311 (332)
| | ++++++|.++++++.+++.+ + ++.++|+| +.+|+| ..++|||+||++ ++|++++++ + +|+++|++
T Consensus 235 k~~kg-~t~~~~a~a~~~ii~ail~~~~~-~~~v~~~s-~~~~~~--~~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~ 308 (323)
T PLN00106 235 KAGAG-SATLSMAYAAARFADACLRGLNG-EADVVECS-YVQSEV--TELPFFASKVRLGRNGVEEVLG-LGPLSEYEQK 308 (323)
T ss_pred ccCCC-CchHHHHHHHHHHHHHHHhccCC-CceEEEEE-EECccc--CCceEEEEEEEEcCCeeEEEcC-CCCCCHHHHH
Confidence 4 5 45456777899988764443 3 67899999 666665 223999999997 999999998 7 99999999
Q ss_pred HHHHHHHHHHHHHH
Q 020022 312 KLDLTAEELSEEKA 325 (332)
Q Consensus 312 ~l~~s~~~i~~~~~ 325 (332)
+|++|++.|++.++
T Consensus 309 ~l~~S~~~i~~~~~ 322 (323)
T PLN00106 309 GLEALKPELKASIE 322 (323)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998765
No 33
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-56 Score=413.79 Aligned_cols=298 Identities=23% Similarity=0.332 Sum_probs=252.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe--eCChhhhcCCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA--TTDAVEACTGV 82 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~--~~~~~~al~~a 82 (332)
|||+||||+|.+|+++++.|.. .+... +++|+|+++ ..+++++|++|.. ....+.. ..+.+++++++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~-----el~L~d~~~---~~~g~alDl~~~~--~~~~i~~~~~~d~~~~l~~~ 70 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGS-----ELSLYDIAP---VTPGVAVDLSHIP--TAVKIKGFSGEDPTPALEGA 70 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCcc-----EEEEEecCC---CCcceehhhhcCC--CCceEEEeCCCCHHHHcCCC
Confidence 5999999889999999998865 34333 899999974 3567889998752 1123333 34558999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH----HhCCCCCCCcEEEech
Q 020022 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK----EFAPSIPAKNITCLTR 158 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~----~~~~~~~~~~i~~~t~ 158 (332)
|+||+++|.+++++++|.+++..|+++++++++.|++++ |+++++++|||+|+||++++ ++ +|+|++|++|.|.
T Consensus 71 DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~D~~t~~~~~~~~~~-sg~p~~rvig~~~ 148 (312)
T PRK05086 71 DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPVNTTVAIAAEVLKKA-GVYDKNKLFGVTT 148 (312)
T ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchHHHHHHHHHHHHHh-cCCCHHHEEeeec
Confidence 999999999999999999999999999999999999998 57999999999999999988 76 7999999767777
Q ss_pred HHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC-ceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH
Q 020022 159 LDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237 (332)
Q Consensus 159 lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~-~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (332)
|||+|+++++|++++++|++|+++ ||||||+ ++||+||++ +|.|+.+ +. .+++.+++++++++|++
T Consensus 149 Lds~R~~~~ia~~l~~~~~~v~~~-v~GeHg~~s~~p~~S~~------~g~~l~~----~~--~~~i~~~v~~~g~~ii~ 215 (312)
T PRK05086 149 LDVIRSETFVAELKGKQPGEVEVP-VIGGHSGVTILPLLSQV------PGVSFTE----QE--VADLTKRIQNAGTEVVE 215 (312)
T ss_pred HHHHHHHHHHHHHhCCChhheEEE-EEEecCCCceecccccc------CCccCCH----HH--HHHHHHHHHHHHHHHHh
Confidence 999999999999999999999977 5899977 999999999 4677732 22 36899999999999999
Q ss_pred hc--CccchHHHHHHHHHHHHHHHcC-CCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCC-CCCHHHHHH
Q 020022 238 AR--KLSSALSAASSACDHIRDWVLG-TPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGL-SIDEFSRKK 312 (332)
Q Consensus 238 ~k--g~~~~~~~a~~~~~~i~~~i~~-~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~-~l~~~E~~~ 312 (332)
.| ++++++++|.++++++.+++.+ +++++++|++ +++|+ |. +|+|||+||++ ++|++++++ + +|+++|+++
T Consensus 216 ~k~~~g~t~~~~a~a~~~~v~ai~~~~~~~~~v~~~~-~~~~~-g~-~~v~~s~P~~ig~~Gv~~i~~-~~~L~~~E~~~ 291 (312)
T PRK05086 216 AKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECA-YVEGD-GK-YARFFAQPVLLGKNGVEERLP-IGTLSAFEQNA 291 (312)
T ss_pred cccCCCCchhhHHHHHHHHHHHHHhcCCCCCcEEEEE-EEecc-CC-cceEEEEEEEEcCCeeEEEcC-CCCCCHHHHHH
Confidence 87 2345556677899988775533 2277899976 78886 76 78999999997 999999998 7 999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhC
Q 020022 313 LDLTAEELSEEKALAYSCLS 332 (332)
Q Consensus 313 l~~s~~~i~~~~~~~~~~~~ 332 (332)
|++|++.|++.++...+|++
T Consensus 292 l~~s~~~i~~~~~~g~~~~~ 311 (312)
T PRK05086 292 LEGMLDTLKKDIALGEEFVN 311 (312)
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999974
No 34
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=7e-52 Score=376.68 Aligned_cols=258 Identities=33% Similarity=0.510 Sum_probs=230.6
Q ss_pred EEEEcCCCchHHHHHHHHHhcc--cCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCCcE
Q 020022 8 VLVTGAAGQIGYALVPMIARGV--MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~--~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~aDi 84 (332)
|+||||+|.+|+.+++.|+..+ ... +|+|+|+++ +++++.++|++|..... ..+++.+++.+++++|||+
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~-----el~L~D~~~--~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDi 73 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAI-----ELVLYDIDE--EKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADV 73 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcce-----EEEEEeCCc--ccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCE
Confidence 6899966999999999999877 322 899999985 78899999999987654 3466767777999999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHHHHHH
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRA 164 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~ 164 (332)
||+++|.++++|++|.+++.+|++++++++++|+++| |++|+|++|||+|++|++++++ +|+|++|++|.|.+|+.|+
T Consensus 74 Vv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~-p~a~~i~~tNP~d~~t~~~~~~-sg~~~~kviG~~~ld~~r~ 151 (263)
T cd00650 74 VIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS-PDAWIIVVSNPVDIITYLVWRY-SGLPKEKVIGLGTLDPIRF 151 (263)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHHH-hCCCchhEEEeecchHHHH
Confidence 9999999999999999999999999999999999999 6899999999999999999999 6999999655444999999
Q ss_pred HHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHHhcCccch
Q 020022 165 LGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKLSSA 244 (332)
Q Consensus 165 ~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~kg~~~~ 244 (332)
++++|+++++++++|+.+ |||+||++++|+||+++
T Consensus 152 ~~~la~~l~v~~~~v~~~-v~G~hg~~~~~~~s~~~-------------------------------------------- 186 (263)
T cd00650 152 RRILAEKLGVDPDDVKVY-ILGEHGGSQVPDWSTVR-------------------------------------------- 186 (263)
T ss_pred HHHHHHHhCCCccceEEE-EEEcCCCceEeccccch--------------------------------------------
Confidence 999999999999999966 59999999999999764
Q ss_pred HHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 020022 245 LSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 323 (332)
Q Consensus 245 ~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~ 323 (332)
.|.++++++.+ +.+| ++.++|+|++++|+||+|+|++||+||++ ++|++++++ ++|+++|+++|+++++.++..
T Consensus 187 --~a~~~~~ii~a-i~~~-~~~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~-~~l~~~e~~~l~~s~~~~~~~ 261 (263)
T cd00650 187 --IATSIADLIRS-LLND-EGEILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIE-VGLTDFELEKLQKSADTLKKE 261 (263)
T ss_pred --HHHHHHHHHHH-HHcC-CCEEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEec-CCCCHHHHHHHHHHHHHHHHH
Confidence 34567887766 5566 89999999999999998899999999997 999999998 899999999999999999876
Q ss_pred H
Q 020022 324 K 324 (332)
Q Consensus 324 ~ 324 (332)
+
T Consensus 262 ~ 262 (263)
T cd00650 262 L 262 (263)
T ss_pred h
Confidence 4
No 35
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=4.6e-48 Score=337.27 Aligned_cols=301 Identities=26% Similarity=0.346 Sum_probs=251.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGV 82 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~a 82 (332)
+..||+|.||+|.+|+.+..+|.+..+.+ +++|||+.. ..|.+.||+|..... ...+....+++.|+++|
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs-----~LaLYDi~~----~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~a 97 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVS-----ELALYDIAN----TPGVAADLSHINTNSSVVGFTGADGLENALKGA 97 (345)
T ss_pred CcceEEEEecCCccCccHHHHHhcCcccc-----eeeeeeccc----CCcccccccccCCCCceeccCChhHHHHHhcCC
Confidence 35799999999999999999999888776 899999973 688999999987532 23444455789999999
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC---CCCCCCcEEEechH
Q 020022 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA---PSIPAKNITCLTRL 159 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~---~~~~~~~i~~~t~l 159 (332)
|+||+-||+||+|||+|+|+|..|+.|+++++..+.++| |++.+.++|||++....++.+.. .-|+++|++|.|+|
T Consensus 98 dvVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~c-P~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVTtL 176 (345)
T KOG1494|consen 98 DVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCC-PNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTL 176 (345)
T ss_pred CEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhC-ccceeEeecCcccccchHHHHHHHHcCCCCccceeceehh
Confidence 999999999999999999999999999999999999999 67999999999998766655443 34788899999999
Q ss_pred HHHHHHHHHHHHcCCCC-CCeeeeEEEeccCC-ceeecCCceeEecCCCCcchhhhhhhcccchhHHHHHHHhhHHHHHH
Q 020022 160 DHNRALGQISEKLNVQV-SDVKNVIIWGNHSS-SQYPDVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIK 237 (332)
Q Consensus 160 ds~r~~~~la~~l~v~~-~~v~~~~v~G~hg~-~~v~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~ 237 (332)
|..|.++++++.++++| .+++ ++|+|+|.. +.+|++|++++. .. +.++ ..+.++++++++|.|+.+
T Consensus 177 DvVRA~tFv~~~~~~~p~~~v~-VPVIGGHaG~TIlPLlSQ~~p~--------~~-~~~~--~~~~Lt~RiQ~gGtEVV~ 244 (345)
T KOG1494|consen 177 DVVRANTFVAEVLNLDPAEDVD-VPVIGGHAGITIIPLLSQCKPP--------FR-FTDD--EIEALTHRIQNGGTEVVK 244 (345)
T ss_pred hhhhHHHHHHHHhCCCchhcCC-cceecCcCCceEeeecccCCCc--------cc-CCHH--HHHHHHHHHHhCCceEEE
Confidence 99999999999999999 4476 778899975 999999999871 11 1122 236889999999999999
Q ss_pred hcCc--cchHHHHHHHHHHH---HHHHcCCCCceEEEeeeecCCCCCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHH
Q 020022 238 ARKL--SSALSAASSACDHI---RDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRK 311 (332)
Q Consensus 238 ~kg~--~~~~~~a~~~~~~i---~~~i~~~~~~~i~~~sv~~~g~ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~ 311 (332)
.|.+ +..+++|+|.++.. ...+.++ ++.+.|..|.++. +++ .||+.|+++ ++|++++....+|+++|++
T Consensus 245 AKaGaGSATLSMAyAga~fa~s~lrgl~G~-~~v~ecafV~s~~-~~~---~fFaspv~Lg~~Gv~~v~~l~~lsd~E~~ 319 (345)
T KOG1494|consen 245 AKAGAGSATLSMAYAGAKFADSLLRGLNGD-EDVVECAFVASPV-TEL---PFFATPVTLGKKGVEEVLGLGKLSDYEEK 319 (345)
T ss_pred eccCCCchhhhHHHHHHHHHHHHHHHhCCC-CCeEEEeEEeccc-cCc---cceeceEEecCCceeeecCCCccCHHHHH
Confidence 8853 56678777765543 3346676 6777777777763 455 499999987 9999999986699999999
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 020022 312 KLDLTAEELSEEKALAYSCL 331 (332)
Q Consensus 312 ~l~~s~~~i~~~~~~~~~~~ 331 (332)
.|+.+..+|+..++...+|.
T Consensus 320 ~l~~~~~eLk~sI~KGv~F~ 339 (345)
T KOG1494|consen 320 ALEAAKPELKKSIEKGVTFV 339 (345)
T ss_pred HHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999985
No 36
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=100.00 E-value=1.7e-36 Score=258.91 Aligned_cols=168 Identities=34% Similarity=0.463 Sum_probs=150.4
Q ss_pred chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCCceeEecCCCCcchhhhhhh----cccchhHHHHHHHhhH
Q 020022 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELVKD----DAWLNGEFITTVQQRG 232 (332)
Q Consensus 157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~----~~~~~~~~~~~v~~~~ 232 (332)
|.||++||++++|+++|++|.+++.+ ||||||+++||+||++++ +|.|+.++.+. ..|..+++.+++++++
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~~-ViGeHg~s~~~~~S~~~v----~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g 75 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNAY-VIGEHGDSQVPDWSHAKV----GGVPLLSYAKPSGKLSEEELEELTERVRKAG 75 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEEE-EEBSSSTTEEEEGGGEEE----TTEEHHHHHHTTTSSSHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEEE-EEecCCcceeeeeecccc----cccccccccccccchhHHhhhccccccEecc
Confidence 78999999999999999999999977 589999999999999999 99999776543 2455679999999999
Q ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCCCCCCCc-eEEEEeeEe-cCCcEEEecCCCCCHHHH
Q 020022 233 AAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAG-LIYSFPVTC-RNGEWTIVQGLSIDEFSR 310 (332)
Q Consensus 233 ~~i~~~kg~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~ygi~~~-~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~ 310 (332)
++|++.|++++++++|.++++++.+ |..+ .+.++|+|++++|+||++.+ +|||+||++ ++|++++++.++|+++|+
T Consensus 76 ~~ii~~k~g~t~~s~A~a~~~~v~a-il~~-~~~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~ 153 (174)
T PF02866_consen 76 YEIIKAKGGSTSYSIAAAAARIVEA-ILKD-ERRILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQ 153 (174)
T ss_dssp HHHHHHHSSSCHHHHHHHHHHHHHH-HHTT-HTEEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHH
T ss_pred ceeeeeccccCcCCHHHHHHHHHHH-Hhhc-ccccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHH
Confidence 9999999656667788899998876 5556 79999999999999999655 999999997 999999997689999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhh
Q 020022 311 KKLDLTAEELSEEKALAYSCL 331 (332)
Q Consensus 311 ~~l~~s~~~i~~~~~~~~~~~ 331 (332)
++|++|++.|+++++.+.+|.
T Consensus 154 ~~l~~sa~~l~~~i~~~~~f~ 174 (174)
T PF02866_consen 154 EKLKESAKELKKEIEKGLEFV 174 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999883
No 37
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=100.00 E-value=7.6e-33 Score=227.94 Aligned_cols=141 Identities=29% Similarity=0.510 Sum_probs=129.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||+||||+|.||+++++.|++.++.+ ||+|+|+++ ++++|+++||+|+..+...+..+..+.+++++|||+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~-----ei~L~D~~~--~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLAD-----EIVLIDINE--DKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSS-----EEEEEESSH--HHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCC-----ceEEeccCc--ccceeeehhhhhhhhhcccccccccccccccccccEE
Confidence 599999977999999999999998876 999999984 6899999999999877766677777899999999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC 155 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~ 155 (332)
|+++|.++++|++|.+++..|+++++++++.|.+++ |+++++++|||+|++|++++++ +++|++|++|
T Consensus 74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~-p~~~vivvtNPvd~~t~~~~~~-s~~~~~kviG 141 (141)
T PF00056_consen 74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYA-PDAIVIVVTNPVDVMTYVAQKY-SGFPPNKVIG 141 (141)
T ss_dssp EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHS-TTSEEEE-SSSHHHHHHHHHHH-HTSSGGGEEE
T ss_pred EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhC-CccEEEEeCCcHHHHHHHHHHh-hCcCcccCcC
Confidence 999999999999999999999999999999999999 6799999999999999999998 7999999654
No 38
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=99.97 E-value=5.6e-29 Score=238.82 Aligned_cols=294 Identities=16% Similarity=0.169 Sum_probs=198.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCC-CCc-eEEEEEeCCCchhhhhhhHHHHhhhh-c--CCccceEeeCChhhhcC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGT-DQP-VILHMLDIPPAAEALNGVKMELVDAA-F--PLLKGVVATTDAVEACT 80 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~-~~~-~ei~L~D~~~~~~~l~~~~~dl~~~~-~--~~~~~~~~~~~~~~al~ 80 (332)
+||+|||| |+ +..+.|+..-+..+ ..+ .||+|+|+++ ++++- +..+.... . ....++..++|..+|++
T Consensus 1 ~KI~iIGg-GS---~~tp~li~~l~~~~~~l~~~ei~L~Did~--~Rl~~-v~~l~~~~~~~~g~~~~v~~ttD~~~Al~ 73 (425)
T cd05197 1 VKIAIIGG-GS---SFTPELVSGLLKTPEELPISEVTLYDIDE--ERLDI-ILTIAKRYVEEVGADIKFEKTMDLEDAII 73 (425)
T ss_pred CEEEEECC-ch---HhHHHHHHHHHcChhhCCCCEEEEEcCCH--HHHHH-HHHHHHHHHHhhCCCeEEEEeCCHHHHhC
Confidence 59999996 44 34444432211111 122 2899999985 55542 22222211 1 12346788999999999
Q ss_pred CCcEEEEeCCCC------------CCCC---CC-----HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022 81 GVNIAVMVGGFP------------RKEG---ME-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (332)
Q Consensus 81 ~aDiVi~~ag~~------------~~~~---~~-----r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~ 140 (332)
|||+||.+..+. .+.| ++ ......+|+++++++++.|+++| |++|+|++|||+|++|++
T Consensus 74 gADfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~-P~a~lin~TNP~di~t~a 152 (425)
T cd05197 74 DADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLS-PDAWYLNFTNPAGEVTEA 152 (425)
T ss_pred CCCEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhC-CCcEEEecCChHHHHHHH
Confidence 999999985432 1222 11 22345799999999999999999 689999999999999999
Q ss_pred HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCCCcchhhhhhh---
Q 020022 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVRELVKD--- 216 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~--- 216 (332)
+++++ |+.|++|.|.. +.|+++.+|+.+|+++++|+.++ +| ||| ++||++++ +|+|+...+.+
T Consensus 153 ~~~~~---p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v-~GlnHg----~~~s~~~~----~G~~l~p~l~~~~~ 219 (425)
T cd05197 153 VRRYV---PPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQY-AGLNHG----IWLNRVRY----NGGDVTPKLDEWVE 219 (425)
T ss_pred HHHhC---CCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEE-EeccCe----EeeEeEEE----CCeecHHHHHHHHh
Confidence 99983 66787777766 89999999999999999999775 79 999 99999999 78777644321
Q ss_pred ---------c-------ccch------------------------hH-HHH---------HHHhhH---HHHHH-----h
Q 020022 217 ---------D-------AWLN------------------------GE-FIT---------TVQQRG---AAIIK-----A 238 (332)
Q Consensus 217 ---------~-------~~~~------------------------~~-~~~---------~v~~~~---~~i~~-----~ 238 (332)
. .|.. ++ +.+ .+.+.. ++..+ .
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~ 299 (425)
T cd05197 220 EKSKDWKTENPFVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENP 299 (425)
T ss_pred ccCccccccccccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcC
Confidence 0 0100 00 000 000000 01110 0
Q ss_pred cC------ccchHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHH
Q 020022 239 RK------LSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSR 310 (332)
Q Consensus 239 kg------~~~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~ 310 (332)
+. ...++ +..++.+|. ++.+| ++.++.++|..+|. -++|.|.++.+||++ ++|+.++.. .+|++...
T Consensus 300 ~~~~~~~r~~~~~--~e~a~~ii~-ai~~~-~~~~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~v-g~lp~~~~ 374 (425)
T cd05197 300 SVVELIKRGGRKY--SEAAIPLIR-ALLND-NGARFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKV-GPLDRFVK 374 (425)
T ss_pred ChhhhhhcCCccc--HHHHHHHHH-HHHcC-CCeEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccc-CCCCHHHH
Confidence 00 01112 245677665 57777 88999999999997 699999999999998 999999865 68988777
Q ss_pred HHHHHHHHHHHHHHH
Q 020022 311 KKLDLTAEELSEEKA 325 (332)
Q Consensus 311 ~~l~~s~~~i~~~~~ 325 (332)
.+++.-...-+-.++
T Consensus 375 ~Li~~~~~~e~l~ve 389 (425)
T cd05197 375 GLLRQRKMRERLALE 389 (425)
T ss_pred HHHHHHHHHHHHHHH
Confidence 766654433333333
No 39
>PRK15076 alpha-galactosidase; Provisional
Probab=99.97 E-value=4.5e-28 Score=233.37 Aligned_cols=292 Identities=16% Similarity=0.140 Sum_probs=202.8
Q ss_pred cEEEEEcCCCchHHHHHH--HHH-hcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhhcC--CccceEeeCChhhhc
Q 020022 6 VRVLVTGAAGQIGYALVP--MIA-RGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFP--LLKGVVATTDAVEAC 79 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~--~l~-~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~~~--~~~~~~~~~~~~~al 79 (332)
+||+||| +|++|.+.++ .++ ..++.+ .||+|+|+++ ++++ +..+ +.+.... ...+++.+++.++|+
T Consensus 2 ~KIaIIG-aGsvg~~~~~~~~i~~~~~l~~----~evvLvDid~--er~~~~~~l-~~~~~~~~~~~~~i~~ttD~~eal 73 (431)
T PRK15076 2 PKITFIG-AGSTVFTKNLLGDILSVPALRD----AEIALMDIDP--ERLEESEIV-ARKLAESLGASAKITATTDRREAL 73 (431)
T ss_pred cEEEEEC-CCHHHhHHHHHHHHhhCccCCC----CEEEEECCCH--HHHHHHHHH-HHHHHHhcCCCeEEEEECCHHHHh
Confidence 6999999 5999988776 555 233221 2899999985 5665 4444 5554322 234677788889999
Q ss_pred CCCcEEEEeCCCC-CCCC--------------CCHHHH--------HHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 80 TGVNIAVMVGGFP-RKEG--------------MERKDV--------MSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 80 ~~aDiVi~~ag~~-~~~~--------------~~r~~~--------~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
+|||+||++++++ .+++ ++|.+. +.+|+++++++++.|+++| |++|+|++|||+|+
T Consensus 74 ~dADfVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~-p~a~iin~tNP~di 152 (431)
T PRK15076 74 QGADYVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVC-PDALLLNYVNPMAM 152 (431)
T ss_pred CCCCEEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHC-CCeEEEEcCChHHH
Confidence 9999999999987 4434 455566 8999999999999999999 68999999999999
Q ss_pred hHHHHHHhCCCCCCCcEEEe--chHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCCCcchhhh
Q 020022 137 NALILKEFAPSIPAKNITCL--TRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVREL 213 (332)
Q Consensus 137 ~~~~~~~~~~~~~~~~i~~~--t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~~~~ 213 (332)
+|+.+++ +|+.|++|. +.+++. +.+|+.+|+++++|+..+ .| ||. .|+.+++. +|+++...
T Consensus 153 vt~~~~~----~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~-~GlNH~----~W~~~~~~----~G~D~~p~ 216 (431)
T PRK15076 153 NTWAMNR----YPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRC-AGINHM----AWYLELER----KGEDLYPE 216 (431)
T ss_pred HHHHHhc----CCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEE-Eeecch----hhheeeeE----CCcchHHH
Confidence 9999874 466675454 677765 789999999999999775 68 776 78888877 55544422
Q ss_pred hhh---------------------------------c--ccc----hhHHHHHH--------------HhhHHHHH-Hhc
Q 020022 214 VKD---------------------------------D--AWL----NGEFITTV--------------QQRGAAII-KAR 239 (332)
Q Consensus 214 ~~~---------------------------------~--~~~----~~~~~~~v--------------~~~~~~i~-~~k 239 (332)
+.+ + .|- .++..+.. .....+.+ ...
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (431)
T PRK15076 217 LRAAAAEGQTRCQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELA 296 (431)
T ss_pred HHHHHhccCchhcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhh
Confidence 211 0 010 11111100 00011111 111
Q ss_pred Cccch--HHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHH
Q 020022 240 KLSSA--LSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDL 315 (332)
Q Consensus 240 g~~~~--~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~ 315 (332)
+..++ ...+..++++|. +|.+| .+.++.++|..+|. -++|.|.++.+||.+ ++|+.++.. .+|++..+.+++.
T Consensus 297 ~~~~~~~~~~~e~a~~ii~-ai~~~-~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~~ 373 (431)
T PRK15076 297 NAERIEIKRSREYASTIIE-AIETG-EPSVIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNRT 373 (431)
T ss_pred CCCccccccchHHHHHHHH-HHhcC-CceEEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHHH
Confidence 22111 112245778665 47787 88999999999996 699999999999998 999999876 6899988887765
Q ss_pred HHHHHHHHHH
Q 020022 316 TAEELSEEKA 325 (332)
Q Consensus 316 s~~~i~~~~~ 325 (332)
-...-+-.++
T Consensus 374 ~~~~e~l~ve 383 (431)
T PRK15076 374 NINVQELTVE 383 (431)
T ss_pred HHHHHHHHHH
Confidence 4443333333
No 40
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=99.96 E-value=1.9e-27 Score=227.87 Aligned_cols=287 Identities=18% Similarity=0.168 Sum_probs=197.5
Q ss_pred cEEEEEcCCCchHH-HHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhhcCC
Q 020022 6 VRVLVTGAAGQIGY-ALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTG 81 (332)
Q Consensus 6 ~kI~IiGa~G~vG~-~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~al~~ 81 (332)
+||+|||| |++-. .+...|+.. .-++ ..||+|+|+++ +++++........... ....++..++|..+|++|
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~---~~ei~L~Did~-~~rl~~v~~~~~~~~~~~~~~~~v~~t~d~~~al~g 75 (419)
T cd05296 1 MKLTIIGG-GSSYTPELIEGLIRRYEELP---VTELVLVDIDE-EEKLEIVGALAKRMVKKAGLPIKVHLTTDRREALEG 75 (419)
T ss_pred CEEEEECC-chHhHHHHHHHHHhccccCC---CCEEEEecCCh-HHHHHHHHHHHHHHHHhhCCCeEEEEeCCHHHHhCC
Confidence 59999996 55422 233444432 2111 12899999994 3566543222222221 123467788999999999
Q ss_pred CcEEEEeCCCCCCCCCCHHHH--------------------HHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022 82 VNIAVMVGGFPRKEGMERKDV--------------------MSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 82 aDiVi~~ag~~~~~~~~r~~~--------------------~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~ 141 (332)
||+||++++++..++.++++. ..+|+++++++++.|+++| |++|+|++|||++++|+++
T Consensus 76 adfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~-Pda~lin~TNP~~ivt~a~ 154 (419)
T cd05296 76 ADFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELA-PDAWLINFTNPAGIVTEAV 154 (419)
T ss_pred CCEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHH
Confidence 999999988877666555542 6789999999999999999 6899999999999999999
Q ss_pred HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCCCcchhhhhhh----
Q 020022 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVRELVKD---- 216 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~---- 216 (332)
+++ + +.|++|.|..+ .|+++.+|+.+|+++++|+.++ +| ||- .|+.+++. +|+++...+.+
T Consensus 155 ~k~-~---~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v-~GlNH~----~w~~~~~~----~G~D~~p~l~~~~~~ 220 (419)
T cd05296 155 LRH-T---GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDY-AGLNHL----GWLRRVLL----DGEDVLPELLEDLAA 220 (419)
T ss_pred HHh-c---cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEE-Eecccc----eeeeeeeE----CCcccHHHHHHHhhh
Confidence 987 3 45777777774 8999999999999999999775 79 997 67777777 56555432210
Q ss_pred -------cccch--------------------hHHHHH-HH---hhH-------HHHH---H------------hcCccc
Q 020022 217 -------DAWLN--------------------GEFITT-VQ---QRG-------AAII---K------------ARKLSS 243 (332)
Q Consensus 217 -------~~~~~--------------------~~~~~~-v~---~~~-------~~i~---~------------~kg~~~ 243 (332)
..|.. ++..+. .. .++ .+++ + .++ ..
T Consensus 221 ~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~~r~-g~ 299 (419)
T cd05296 221 LLSFEEGLLFGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELEKRG-GA 299 (419)
T ss_pred ccccccccchHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhHhhc-Cc
Confidence 01110 111111 00 011 1111 1 111 01
Q ss_pred hHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHH
Q 020022 244 ALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAE 318 (332)
Q Consensus 244 ~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~ 318 (332)
+++ ..++.+|. ++.+| ++.++.++|..+|. -++|.|.++.+||.+ ++|+.++-. -+|++....+++.-..
T Consensus 300 ~y~--e~a~~ii~-ai~~~-~~~~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~~ 371 (419)
T cd05296 300 GYS--EAALALIS-AIYND-KGDIHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVKA 371 (419)
T ss_pred chH--HHHHHHHH-HHhcC-CCcEEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHHH
Confidence 122 45677665 47777 88999999999997 689999999999998 999999865 6899988877665443
No 41
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.96 E-value=2.2e-26 Score=221.28 Aligned_cols=297 Identities=17% Similarity=0.183 Sum_probs=196.4
Q ss_pred cEEEEEcCCCch-HHHHHHHHHhcccCCCCCc-eEEEEEeCCCchhhhhhhHHHHhhhhc---CCccceEeeCChhhhcC
Q 020022 6 VRVLVTGAAGQI-GYALVPMIARGVMLGTDQP-VILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEACT 80 (332)
Q Consensus 6 ~kI~IiGa~G~v-G~~la~~l~~~~~~~~~~~-~ei~L~D~~~~~~~l~~~~~dl~~~~~---~~~~~~~~~~~~~~al~ 80 (332)
|||+|||| |++ +-.++..|+... +..+ .+|+|+|+++ ++++- +..+..... ....++..++|..+|++
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~---~~l~~~ei~L~DId~--~rl~~-v~~l~~~~~~~~g~~~~v~~Ttdr~eAl~ 73 (437)
T cd05298 1 FKIVIAGG-GSTYTPGIVKSLLDRK---EDFPLRELVLYDIDA--ERQEK-VAEAVKILFKENYPEIKFVYTTDPEEAFT 73 (437)
T ss_pred CeEEEECC-cHHHHHHHHHHHHhCc---ccCCCCEEEEECCCH--HHHHH-HHHHHHHHHHhhCCCeEEEEECCHHHHhC
Confidence 59999996 443 112333344331 1112 2899999995 55543 222322111 22347888999999999
Q ss_pred CCcEEEEeCCCC------------CCCC---CC-----HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022 81 GVNIAVMVGGFP------------RKEG---ME-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (332)
Q Consensus 81 ~aDiVi~~ag~~------------~~~~---~~-----r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~ 140 (332)
|||+||.+..+. .+.| ++ ..-...||+++++++++.|+++| |++|+|++|||++++|++
T Consensus 74 gADfVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~-pda~lin~tNP~~~vt~~ 152 (437)
T cd05298 74 DADFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYS-PDAWILNYSNPAAIVAEA 152 (437)
T ss_pred CCCEEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHH
Confidence 999999975432 1222 11 12346899999999999999999 689999999999999999
Q ss_pred HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCC-Ccchhhhhh---
Q 020022 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAG-EKPVRELVK--- 215 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~-g~~~~~~~~--- 215 (332)
+++. +|..|++|.|+... .+...+|+.+|+++++++..+ .| ||. .|+.+.+. + |+++...+.
T Consensus 153 ~~~~---~~~~kviGlC~~~~-~~~~~la~~lg~~~~~v~~~~-~GlNH~----~w~~~~~~----~~G~D~~p~l~e~~ 219 (437)
T cd05298 153 LRRL---FPNARILNICDMPI-AIMDSMAAILGLDRKDLEPDY-FGLNHF----GWFTKIYD----KQGEDLLPKLREHV 219 (437)
T ss_pred HHHH---CCCCCEEEECCcHH-HHHHHHHHHhCCCHHHceEEE-Eeecch----hhhhheEE----CCCCchHHHHHHHH
Confidence 9986 47678889998774 678889999999999999665 68 777 77777777 5 555443322
Q ss_pred -hcc--------------cch---------------------------hHHHHH-----------HHhhHHHHH---H--
Q 020022 216 -DDA--------------WLN---------------------------GEFITT-----------VQQRGAAII---K-- 237 (332)
Q Consensus 216 -~~~--------------~~~---------------------------~~~~~~-----------v~~~~~~i~---~-- 237 (332)
+.. |.. ++..+. +.+...+++ +
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~ 299 (437)
T cd05298 220 KENGYLPPDSDEEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKI 299 (437)
T ss_pred hccCCCcccccccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhh
Confidence 101 100 011000 000011110 0
Q ss_pred -hcC-cc--chH--HHHHHHHHHHHHHHcCCCCceEEEeeeecCCCC-CCCCceEEEEeeEe-cCCcEEEecCCCCCHHH
Q 020022 238 -ARK-LS--SAL--SAASSACDHIRDWVLGTPEGTWVSMGVYSDGSY-NVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFS 309 (332)
Q Consensus 238 -~kg-~~--~~~--~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~y-gi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E 309 (332)
... .. ... .-+.++++++. +|.+| ++.++++|+..+|.| ++|.|+++++||++ ++|+.++.- .+|++..
T Consensus 300 ~~~~~~~~~~~~~~~ya~~a~~ii~-aI~~d-~~~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~ 376 (437)
T cd05298 300 IETGTAEGSTFHVDVHGEYIVDLAA-SIAYN-TKERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFY 376 (437)
T ss_pred hhcCChhhhhhhccchHHHHHHHHH-HHHcC-CCeEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHH
Confidence 000 00 111 12345777665 58888 899999999999998 47899999999997 999999875 6899988
Q ss_pred HHHHHHHHHHHHHHHHH
Q 020022 310 RKKLDLTAEELSEEKAL 326 (332)
Q Consensus 310 ~~~l~~s~~~i~~~~~~ 326 (332)
..+++.-...-+-.+++
T Consensus 377 ~~l~~~~~~~e~l~veA 393 (437)
T cd05298 377 KGLMEQQVAYEKLLVEA 393 (437)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88776554443333333
No 42
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.95 E-value=7.1e-25 Score=211.54 Aligned_cols=296 Identities=16% Similarity=0.113 Sum_probs=205.0
Q ss_pred cEEEEEcCCCchHHHHHH--HHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChhhhcC
Q 020022 6 VRVLVTGAAGQIGYALVP--MIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAVEACT 80 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~--~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~~al~ 80 (332)
+||+||| +|++|++++. .++.. .+.+ .+|+|+|+++ ++++....++.+.... ...+++.+++.++|++
T Consensus 1 ~KIaIIG-aGs~G~a~a~~~~i~~~~~~~g----~eV~L~Did~--e~l~~~~~~~~~~~~~~~~~~~I~~ttD~~eal~ 73 (423)
T cd05297 1 IKIAFIG-AGSVVFTKNLVGDLLKTPELSG----STIALMDIDE--ERLETVEILAKKIVEELGAPLKIEATTDRREALD 73 (423)
T ss_pred CeEEEEC-CChHHhHHHHHHHHhcCCCCCC----CEEEEECCCH--HHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHHhc
Confidence 4899999 6999998776 45432 2211 1899999984 6777666666654322 2357777889899999
Q ss_pred CCcEEEEeCCCCCCCCCCH----------------------HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022 81 GVNIAVMVGGFPRKEGMER----------------------KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r----------------------~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~ 138 (332)
|||+||++++....++.++ .....+|++++.++++.++++|| +++++++|||++++|
T Consensus 74 ~AD~Vi~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p-~a~~i~~tNPv~i~t 152 (423)
T cd05297 74 GADFVINTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCP-DAWLLNYANPMAELT 152 (423)
T ss_pred CCCEEEEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCC-CCEEEEcCChHHHHH
Confidence 9999999988765544443 23457899999999999999995 899999999999999
Q ss_pred HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe-ccCCceeecCCceeEecCCCCcchhhhhhh-
Q 020022 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVRELVKD- 216 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~- 216 (332)
++++++ ++ .|+.|.|.. +.++++.+|+.+++++++|+..+ +| ||. .||.+.+. +|+++...+.+
T Consensus 153 ~~~~k~-~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~-~GlNH~----~w~~~~~~----~G~d~~p~l~~~ 218 (423)
T cd05297 153 WALNRY-TP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQV-AGINHM----AWLLKFEY----NGEDLYPLLDEW 218 (423)
T ss_pred HHHHHh-CC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEE-EeeccH----hhhhhheE----CCcchHHHHHHH
Confidence 999998 34 466566644 68999999999999999999775 78 887 77777777 55555433211
Q ss_pred --c---cc------ch----------h-----------------HHHHH--------------HHhhHHHHHHhcCc-c-
Q 020022 217 --D---AW------LN----------G-----------------EFITT--------------VQQRGAAIIKARKL-S- 242 (332)
Q Consensus 217 --~---~~------~~----------~-----------------~~~~~--------------v~~~~~~i~~~kg~-~- 242 (332)
+ .| .. . +.... ..+.-+.-...... .
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (423)
T cd05297 219 IEEGSEEWDQLSPVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLILAEI 298 (423)
T ss_pred HhccCccchhcccchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhccchh
Confidence 0 00 00 0 00000 00000000000000 0
Q ss_pred ----chH--HHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHH
Q 020022 243 ----SAL--SAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLD 314 (332)
Q Consensus 243 ----~~~--~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~ 314 (332)
... ..+..++.+|. +|.+| ++.++.++|..+|. -|+|.|.++.+||.+ ++|+.++.. .+|+.....+++
T Consensus 299 ~~~~~~~~~~~~e~a~~ii~-ai~~~-~~~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~-g~lp~~~~~l~~ 375 (423)
T cd05297 299 DKEELDPVKRSGEYASPIIE-ALVTG-KPRRINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKI-GPLPPQLAALIR 375 (423)
T ss_pred cchhccccccchHHHHHHHH-HHhcC-CceEEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceeccc-CCCCHHHHHHHH
Confidence 010 01235677665 47777 89999999999997 699999999999998 999999876 689988888776
Q ss_pred HHHHHHHHHHHH
Q 020022 315 LTAEELSEEKAL 326 (332)
Q Consensus 315 ~s~~~i~~~~~~ 326 (332)
.-...-+-.+++
T Consensus 376 ~~~~~e~l~veA 387 (423)
T cd05297 376 PRINVQELAVEA 387 (423)
T ss_pred HHHHHHHHHHHH
Confidence 554433333333
No 43
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.93 E-value=7.7e-24 Score=199.48 Aligned_cols=294 Identities=19% Similarity=0.238 Sum_probs=194.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCC-CCCce-EEEEEeCCCchhhhhhhHHHHhhhhc---CCccceEeeCChhhh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLG-TDQPV-ILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEA 78 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~-~~~~~-ei~L~D~~~~~~~l~~~~~dl~~~~~---~~~~~~~~~~~~~~a 78 (332)
+..||+|||| |+++.. .++...+.. +..+. ||+|+|+++ ++++ ...++.+... ....++..++|.++|
T Consensus 2 ~~~KI~iIGg-GSt~tp---~~v~g~l~~~e~l~~~el~L~Did~--~r~~-~i~~~~~~~v~~~g~~~kv~~ttd~~eA 74 (442)
T COG1486 2 KKFKIVIIGG-GSTYTP---KLLLGDLARTEELPVRELALYDIDE--ERLK-IIAILAKKLVEEAGAPVKVEATTDRREA 74 (442)
T ss_pred CcceEEEECC-CccccH---HHHHHHHhcCccCCcceEEEEeCCH--HHHH-HHHHHHHHHHHhhCCCeEEEEecCHHHH
Confidence 5679999995 666544 222222211 22233 899999985 5555 2222322211 112467778999999
Q ss_pred cCCCcEEEEeCCC------------CCCCC---CC-----HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022 79 CTGVNIAVMVGGF------------PRKEG---ME-----RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (332)
Q Consensus 79 l~~aDiVi~~ag~------------~~~~~---~~-----r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~ 138 (332)
|+|||||+.+..+ |.+.| ++ .--...|+++++-+|++.|+++| |+||++++|||+.++|
T Consensus 75 l~gAdfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~-P~Aw~lNytNP~~~vT 153 (442)
T COG1486 75 LEGADFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVC-PNAWMLNYTNPAAIVT 153 (442)
T ss_pred hcCCCEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhC-CCceEEeccChHHHHH
Confidence 9999999997543 22333 11 11234789999999999999999 7899999999999999
Q ss_pred HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCC-CCeeeeEEEe-ccCCceeecCCceeEecCCCCcchhhhhhh
Q 020022 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQV-SDVKNVIIWG-NHSSSQYPDVNHATVNTAAGEKPVRELVKD 216 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~-~~v~~~~v~G-~hg~~~v~~~S~~~v~~~~~g~~~~~~~~~ 216 (332)
+++.++. |.-|+.|.|+.. ......+|+.|++++ ++++.- +.| ||. .||.+++. +|.++...+.+
T Consensus 154 eAv~r~~---~~~K~VGlCh~~-~g~~~~lAe~L~~~~~~~l~~~-~aGlNH~----~w~~~~~~----~G~d~~p~l~~ 220 (442)
T COG1486 154 EAVRRLY---PKIKIVGLCHGP-IGIAMELAEVLGLEPREDLRYR-VAGLNHM----VWILRVRD----DGEDLYPELLE 220 (442)
T ss_pred HHHHHhC---CCCcEEeeCCch-HHHHHHHHHHhCCCchhceeEE-Eeechhh----hhhhHhhh----cCccchHHHHH
Confidence 9999973 522788888775 477899999999975 999855 478 887 77777776 44333322110
Q ss_pred ------------------cccch-----------------------------hHHH------HHHHhhHHHHH-------
Q 020022 217 ------------------DAWLN-----------------------------GEFI------TTVQQRGAAII------- 236 (332)
Q Consensus 217 ------------------~~~~~-----------------------------~~~~------~~v~~~~~~i~------- 236 (332)
..|.. .++. +.+.++-.+.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~ 300 (442)
T COG1486 221 ALEEGGSPSEPENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPE 300 (442)
T ss_pred HHhccccCCccccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhh
Confidence 00110 0000 01111100011
Q ss_pred --------HhcCcc-chHHHHHHHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCC
Q 020022 237 --------KARKLS-SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSI 305 (332)
Q Consensus 237 --------~~kg~~-~~~~~a~~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l 305 (332)
+.++.+ ... +..++.+|. +|.+| ++.++.++|..+|. -++|.|..+.+||++ ++|+.++.. ..|
T Consensus 301 ~~~~p~~~~~~~~~~~~~--~e~a~~ii~-Ai~~~-~~~~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~l 375 (442)
T COG1486 301 LKEKPEELEKRIGAGKYS--SEYASNIIN-AIENN-KPSRIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDL 375 (442)
T ss_pred hhcCchhhhhcCCccccc--HHHHHHHHH-HHhcC-CceEEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCC
Confidence 111211 022 245788665 58888 89999999999997 799999999999998 999999887 899
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 020022 306 DEFSRKKLDLTAEELSEE 323 (332)
Q Consensus 306 ~~~E~~~l~~s~~~i~~~ 323 (332)
++.-+.+++.....-+-.
T Consensus 376 P~~~~~l~~~~i~~e~l~ 393 (442)
T COG1486 376 PEFVKGLMHTNINVEELT 393 (442)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999998887655443333
No 44
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.77 E-value=7.2e-18 Score=143.17 Aligned_cols=156 Identities=21% Similarity=0.246 Sum_probs=106.1
Q ss_pred EEEEEcCCCchHHHH--HHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH---HHHhhhhcCCccceEeeCChhhhcCC
Q 020022 7 RVLVTGAAGQIGYAL--VPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK---MELVDAAFPLLKGVVATTDAVEACTG 81 (332)
Q Consensus 7 kI~IiGa~G~vG~~l--a~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~---~dl~~~~~~~~~~~~~~~~~~~al~~ 81 (332)
||+|||| |++-... ...+....-++ ..||+|+|+++ ++++... ..+... .....++..++|..+|++|
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~---~~ei~L~Did~--~RL~~~~~~~~~~~~~-~~~~~~v~~ttd~~eAl~g 73 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEELS---GSEIVLMDIDE--ERLEIVERLARRMVEE-AGADLKVEATTDRREALEG 73 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTST---EEEEEEE-SCH--HHHHHHHHHHHHHHHH-CTTSSEEEEESSHHHHHTT
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccCC---CcEEEEEcCCH--HHHHHHHHHHHHHHHh-cCCCeEEEEeCCHHHHhCC
Confidence 8999995 7665442 22333322221 23899999984 6665321 222111 1224577889999999999
Q ss_pred CcEEEEeCCC------------CCCCCCC----------HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022 82 VNIAVMVGGF------------PRKEGME----------RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL 139 (332)
Q Consensus 82 aDiVi~~ag~------------~~~~~~~----------r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~ 139 (332)
||+||.+..+ |.+.|.. ......|+++++.++++.|+++| |+||+|++|||+.++|.
T Consensus 74 ADfVi~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~-PdAw~iNytNP~~~vt~ 152 (183)
T PF02056_consen 74 ADFVINQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELC-PDAWLINYTNPMGIVTE 152 (183)
T ss_dssp ESEEEE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHT-TTSEEEE-SSSHHHHHH
T ss_pred CCEEEEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEeccChHHHHHH
Confidence 9999998654 3444321 12345799999999999999999 68999999999999999
Q ss_pred HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCC
Q 020022 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNV 174 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v 174 (332)
++.++. |.-|+.|.|+.. .-+...+|+.||+
T Consensus 153 a~~r~~---~~~k~vGlCh~~-~~~~~~la~~L~~ 183 (183)
T PF02056_consen 153 ALSRYT---PKIKVVGLCHGP-QGTRRQLAKLLGM 183 (183)
T ss_dssp HHHHHS---TTSEEEEE-SHH-HHHHHHHHHHHT-
T ss_pred HHHHhC---CCCCEEEECCCH-HHHHHHHHHHhCc
Confidence 999874 435788999886 4778889988874
No 45
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=99.03 E-value=1.7e-09 Score=92.75 Aligned_cols=103 Identities=21% Similarity=0.374 Sum_probs=71.6
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh----hh----c------CCccceEee
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD----AA----F------PLLKGVVAT 72 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~----~~----~------~~~~~~~~~ 72 (332)
||+|+| +|.+|..+|..++..|. +++|+|.++ +.++.....+.+ .. . ....+++.+
T Consensus 1 ~V~ViG-aG~mG~~iA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 70 (180)
T PF02737_consen 1 KVAVIG-AGTMGRGIAALFARAGY-------EVTLYDRSP--EALERARKRIERLLDRLVRKGRLSQEEADAALARISFT 70 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS-------EEEEE-SSH--HHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEE
T ss_pred CEEEEc-CCHHHHHHHHHHHhCCC-------cEEEEECCh--HHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccc
Confidence 799999 69999999999999875 899999985 333221111111 10 0 113578888
Q ss_pred CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 73 TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 73 ~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
+++.++. +||+||.+. .++.++.+++...++++|+|++ |+.||...+
T Consensus 71 ~dl~~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~--ilasnTSsl 117 (180)
T PF02737_consen 71 TDLEEAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDT--ILASNTSSL 117 (180)
T ss_dssp SSGGGGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTS--EEEE--SSS
T ss_pred cCHHHHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCc--eEEecCCCC
Confidence 8887766 999999984 4678999999999999998886 578887654
No 46
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.93 E-value=1.6e-08 Score=93.15 Aligned_cols=113 Identities=19% Similarity=0.229 Sum_probs=80.2
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH----Hhhhhc----------CCc
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME----LVDAAF----------PLL 66 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d----l~~~~~----------~~~ 66 (332)
|+++..||+||| +|.+|..+|..++..|. +++|+|+++ +.++..... +..... ...
T Consensus 1 ~~~~~~~V~ViG-aG~mG~~iA~~~a~~G~-------~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~ 70 (286)
T PRK07819 1 MSDAIQRVGVVG-AGQMGAGIAEVCARAGV-------DVLVFETTE--ELATAGRNRIEKSLERAVSRGKLTERERDAAL 70 (286)
T ss_pred CCCCccEEEEEc-ccHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHHHHHHHHHHHhcccCChhhHHHHH
Confidence 777777999999 69999999999998774 899999985 333221111 111110 012
Q ss_pred cceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCcccchHHH
Q 020022 67 KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALI 140 (332)
Q Consensus 67 ~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~ 140 (332)
.+++.+++. +++++||+||.+. .++.++.+++...++++| +|++ |++||...+....
T Consensus 71 ~~l~~~~~~-~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~~--il~snTS~~~~~~ 128 (286)
T PRK07819 71 ARLRFTTDL-GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPDA--VLASNTSSIPIMK 128 (286)
T ss_pred hCeEeeCCH-HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHH
Confidence 466677776 7799999999984 467888999999999998 7775 5677766644333
No 47
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.91 E-value=4.2e-08 Score=91.35 Aligned_cols=149 Identities=11% Similarity=0.043 Sum_probs=97.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH----HHhhhh------cCCccceEeeCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM----ELVDAA------FPLLKGVVATTD 74 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~----dl~~~~------~~~~~~~~~~~~ 74 (332)
.+||+||| +|.||+.+|..++..|. +++|+|+++ +.+..... .+.... .....+++.+++
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~-------~V~l~D~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~ 76 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGL-------DVVAWDPAP--GAEAALRANVANAWPALERQGLAPGASPARLRFVAT 76 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCC
Confidence 46899999 69999999999998875 899999985 22221111 111110 011245677778
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC-------
Q 020022 75 AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS------- 147 (332)
Q Consensus 75 ~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~------- 147 (332)
.++++++||+||.+. .+|.++.+++...+.++++|++ |+.||.+.+...-++.....
T Consensus 77 l~~av~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s~la~~~~~p~R~~g~ 140 (321)
T PRK07066 77 IEACVADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPTDFYARATHPERCVVG 140 (321)
T ss_pred HHHHhcCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHHHHHHhcCCcccEEEE
Confidence 889999999999983 4678889999999999998876 67888877644433322211
Q ss_pred --C-CCCc-----EE--EechHHHHHHHHHHHHHcCCCCCCe
Q 020022 148 --I-PAKN-----IT--CLTRLDHNRALGQISEKLNVQVSDV 179 (332)
Q Consensus 148 --~-~~~~-----i~--~~t~lds~r~~~~la~~l~v~~~~v 179 (332)
+ |+.. +. ..|.-++......+.+.+|..|--+
T Consensus 141 HffnP~~~~pLVEVv~g~~T~~e~~~~~~~f~~~lGk~pV~v 182 (321)
T PRK07066 141 HPFNPVYLLPLVEVLGGERTAPEAVDAAMGIYRALGMRPLHV 182 (321)
T ss_pred ecCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCEeEec
Confidence 1 3221 22 2355666554555667788766444
No 48
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=98.84 E-value=2.7e-08 Score=91.37 Aligned_cols=168 Identities=22% Similarity=0.249 Sum_probs=106.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hh--HH-HHhhhhc----------CCccce
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GV--KM-ELVDAAF----------PLLKGV 69 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~--~~-dl~~~~~----------~~~~~~ 69 (332)
..+||+||| +|.||+.+|..++..|+ +|+|+|+++ +.++ +. .. -+..... ....++
T Consensus 2 ~i~kv~ViG-aG~MG~gIA~~~A~~G~-------~V~l~D~~~--~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i 71 (307)
T COG1250 2 EIKKVAVIG-AGVMGAGIAAVFALAGY-------DVVLKDISP--EALERALAYIEKNLEKLVEKGKLTEEEADAALARI 71 (307)
T ss_pred CccEEEEEc-ccchhHHHHHHHhhcCC-------ceEEEeCCH--HHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhc
Confidence 456999999 69999999999998654 799999984 2222 11 11 1111110 012345
Q ss_pred EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C-
Q 020022 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P- 146 (332)
Q Consensus 70 ~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~- 146 (332)
+.+++. .++++||+||.++ .+|.++.+++..++.++++|++ |+.||.+.+ ++.++.... +
T Consensus 72 ~~~~~~-~~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~a--IlASNTSsl~it~ia~~~~rpe 134 (307)
T COG1250 72 TPTTDL-AALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDA--ILASNTSSLSITELAEALKRPE 134 (307)
T ss_pred cccCch-hHhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCc--EEeeccCCCCHHHHHHHhCCch
Confidence 555544 4899999999983 6799999999999999998887 679998875 444444321 1
Q ss_pred ---C---C-CCC------cE-EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC-ceeecCCcee
Q 020022 147 ---S---I-PAK------NI-TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS-SQYPDVNHAT 200 (332)
Q Consensus 147 ---~---~-~~~------~i-~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~-~~v~~~S~~~ 200 (332)
| | |+. .+ +-.|.-++......+++++|..|--++..+ |...+ -..|+|..+.
T Consensus 135 r~iG~HFfNP~~~m~LVEvI~g~~T~~e~~~~~~~~~~~igK~~vv~~D~p--GFi~NRil~~~~~eA~ 201 (307)
T COG1250 135 RFIGLHFFNPVPLMPLVEVIRGEKTSDETVERVVEFAKKIGKTPVVVKDVP--GFIVNRLLAALLNEAI 201 (307)
T ss_pred hEEEEeccCCCCcceeEEEecCCCCCHHHHHHHHHHHHHcCCCCEeecCCC--ceehHhHHHHHHHHHH
Confidence 1 1 222 12 223666777778888888886542222222 43333 2335555554
No 49
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.83 E-value=1.2e-07 Score=88.73 Aligned_cols=117 Identities=20% Similarity=0.216 Sum_probs=84.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--------------CccceEe
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--------------LLKGVVA 71 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--------------~~~~~~~ 71 (332)
|||+|+| +|.||...+..|++.|- +++++|+++ ++.+ -|.+...| ...+++.
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GH-------eVv~vDid~--~KV~----~ln~g~~PI~EpgLe~ll~~~~~~gRl~f 66 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGH-------EVVCVDIDE--SKVE----LLNKGISPIYEPGLEELLKENLASGRLRF 66 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCC-------eEEEEeCCH--HHHH----HHhCCCCCCcCccHHHHHHhccccCcEEE
Confidence 6999999 89999999999998762 899999985 3332 22222222 1235899
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccchHHHHH
Q 020022 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTNALILK 142 (332)
Q Consensus 72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~~~~~~~ 142 (332)
+++.++|++++|+++++.|.|.++..+ .++..+...++.|.++-+..++|++- |-|+.....+-.
T Consensus 67 Ttd~~~a~~~adv~fIavgTP~~~dg~------aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~~ 132 (414)
T COG1004 67 TTDYEEAVKDADVVFIAVGTPPDEDGS------ADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVRA 132 (414)
T ss_pred EcCHHHHHhcCCEEEEEcCCCCCCCCC------ccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHHHH
Confidence 999999999999999999999876432 35677778888888877543444443 568876555444
No 50
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=98.83 E-value=3e-08 Score=91.34 Aligned_cols=171 Identities=16% Similarity=0.115 Sum_probs=107.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc---CCccceEeeCChhhhcC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLLKGVVATTDAVEACT 80 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~---~~~~~~~~~~~~~~al~ 80 (332)
..++|+|+||+||||++++..|++.|. +|+-.=+++..++-.....+|..... .+...+.......+|++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-------~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~ 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-------TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-------EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh
Confidence 568999999999999999999999885 45544444321111112333432211 11233444455778999
Q ss_pred CCcEEEEeCCCCCCCCC-CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh--C--------CCCC
Q 020022 81 GVNIAVMVGGFPRKEGM-ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF--A--------PSIP 149 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~-~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~--~--------~~~~ 149 (332)
|||.|+|+|....-... ...+++.-.++...++.+.+.++. ..+-+++|+.... +.+.- . +.+.
T Consensus 78 gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~--sVkrvV~TSS~aA---v~~~~~~~~~~~vvdE~~ws 152 (327)
T KOG1502|consen 78 GCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK--SVKRVVYTSSTAA---VRYNGPNIGENSVVDEESWS 152 (327)
T ss_pred CCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC--CcceEEEeccHHH---hccCCcCCCCCcccccccCC
Confidence 99999999875432222 234788899999999999999985 3566677765432 22110 0 0011
Q ss_pred C------Cc-EEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe
Q 020022 150 A------KN-ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186 (332)
Q Consensus 150 ~------~~-i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G 186 (332)
. ++ -+.++..-..+..+.+|++-+++-.-+....|+|
T Consensus 153 d~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~G 196 (327)
T KOG1502|consen 153 DLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFG 196 (327)
T ss_pred cHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceEC
Confidence 0 11 2445666667888888888887766666555555
No 51
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.75 E-value=7.4e-08 Score=82.91 Aligned_cols=119 Identities=22% Similarity=0.307 Sum_probs=74.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--------------ccceEe
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------LKGVVA 71 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--------------~~~~~~ 71 (332)
|||+|+| .|++|..+|..|+..|. ++..+|+++ ++.+ .+.+...+. ..+++.
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~-------~V~g~D~~~--~~v~----~l~~g~~p~~E~~l~~ll~~~~~~~~l~~ 66 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGH-------QVIGVDIDE--EKVE----ALNNGELPIYEPGLDELLKENVSAGRLRA 66 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS-------EEEEE-S-H--HHHH----HHHTTSSSS-CTTHHHHHHHHHHTTSEEE
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCC-------EEEEEeCCh--HHHH----HHhhccccccccchhhhhccccccccchh
Confidence 6999999 89999999999999874 899999985 3332 233222211 357888
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-CcccchH----HHHHHh
Q 020022 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANTNA----LILKEF 144 (332)
Q Consensus 72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~~~----~~~~~~ 144 (332)
+++..+++++||++|++.+.|...+.+ -+...+.+.++.|.++..++..|++-| -|..... .++.+.
T Consensus 67 t~~~~~ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~ 138 (185)
T PF03721_consen 67 TTDIEEAIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKR 138 (185)
T ss_dssp ESEHHHHHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHH
T ss_pred hhhhhhhhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhh
Confidence 888899999999999999988765432 234555666667766665555555544 4776544 455554
No 52
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=98.74 E-value=1.8e-08 Score=86.95 Aligned_cols=151 Identities=16% Similarity=0.203 Sum_probs=101.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh---hHHHHhhhhc------C---------Cc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG---VKMELVDAAF------P---------LL 66 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~---~~~dl~~~~~------~---------~~ 66 (332)
.+.|+|+| +|.+|+.+|...+..|+ .+.|+|.+++ ...++ ....+.+.+. + ..
T Consensus 11 ~~~V~ivG-aG~MGSGIAQv~a~sg~-------~V~l~d~~~~-aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l 81 (298)
T KOG2304|consen 11 IKNVAIVG-AGQMGSGIAQVAATSGL-------NVWLVDANED-ALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTL 81 (298)
T ss_pred ccceEEEc-ccccchhHHHHHHhcCC-------ceEEecCCHH-HHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHH
Confidence 46899999 69999999999998875 7999999862 22222 2222322221 0 12
Q ss_pred cceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC
Q 020022 67 KGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA 145 (332)
Q Consensus 67 ~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~ 145 (332)
.++..+++...++.+||+||.+ ..+|+++.+++.+.+++.|++++ |+.||...+ ++.++...
T Consensus 82 ~ri~~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~--il~tNTSSl~lt~ia~~~- 144 (298)
T KOG2304|consen 82 DRIKTSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSST--ILATNTSSLSLTDIASAT- 144 (298)
T ss_pred HHHHHcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccce--EEeecccceeHHHHHhhc-
Confidence 4566778888999999998766 57899999999999999998775 678998764 45544322
Q ss_pred CCCCCCcEEE-------------------echHHHHHHHHHHHHHcCCCCCCeeeeE
Q 020022 146 PSIPAKNITC-------------------LTRLDHNRALGQISEKLNVQVSDVKNVI 183 (332)
Q Consensus 146 ~~~~~~~i~~-------------------~t~lds~r~~~~la~~l~v~~~~v~~~~ 183 (332)
. .+.+|+| -|.-++-.+..-+++.+|..+-.++..+
T Consensus 145 ~--~~srf~GlHFfNPvPvMKLvEVir~~~TS~eTf~~l~~f~k~~gKttVackDtp 199 (298)
T KOG2304|consen 145 Q--RPSRFAGLHFFNPVPVMKLVEVIRTDDTSDETFNALVDFGKAVGKTTVACKDTP 199 (298)
T ss_pred c--ChhhhceeeccCCchhHHHhhhhcCCCCCHHHHHHHHHHHHHhCCCceeecCCC
Confidence 1 1122222 2444555556666777777666666555
No 53
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.74 E-value=1.5e-07 Score=91.68 Aligned_cols=166 Identities=14% Similarity=0.049 Sum_probs=103.8
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC-hhhhcC
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD-AVEACT 80 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~-~~~al~ 80 (332)
.++|||.|+||+||||++++..|+..|. +|+.+|+... .... .+.+.. . ...+.. ..| ...++.
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~-------~V~~ldr~~~-~~~~----~~~~~~-~-~~~~~~~~~Di~~~~~~ 183 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGD-------EVIVIDNFFT-GRKE----NLVHLF-G-NPRFELIRHDVVEPILL 183 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCC-ccHh----Hhhhhc-c-CCceEEEECcccccccc
Confidence 3468999999999999999999998763 7999997521 1110 111110 0 011111 112 234577
Q ss_pred CCcEEEEeCCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH------HHHhC-C--C-C
Q 020022 81 GVNIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI------LKEFA-P--S-I 148 (332)
Q Consensus 81 ~aDiVi~~ag~~~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~------~~~~~-~--~-~ 148 (332)
++|+|||+|+... ....+..+.+..|+....++++.+++.. +++|++|.-. + |- ..+.. . . .
T Consensus 184 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g---~r~V~~SS~~-V--Yg~~~~~p~~E~~~~~~~p~ 257 (436)
T PLN02166 184 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG---ARFLLTSTSE-V--YGDPLEHPQKETYWGNVNPI 257 (436)
T ss_pred CCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECcHH-H--hCCCCCCCCCccccccCCCC
Confidence 9999999997532 2223556778899999999999998874 3566665421 1 10 00000 0 0 1
Q ss_pred CCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
.+...++.++....++....++..+++..-++...|+|.+
T Consensus 258 ~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~ 297 (436)
T PLN02166 258 GERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPR 297 (436)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCC
Confidence 1223577788888787777777778887777777778864
No 54
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.72 E-value=1.6e-07 Score=88.90 Aligned_cols=173 Identities=14% Similarity=0.075 Sum_probs=106.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh-hhhcCCccceEe-------eCCh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV-DAAFPLLKGVVA-------TTDA 75 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~-~~~~~~~~~~~~-------~~~~ 75 (332)
.++||.|+||+||+|++++..|+..+. +|+.+|+... .... ...++. ........++.. ...+
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~-------~V~~~d~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l 84 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQ-------TVIGLDNFST-GYQH-NLDDVRTSVSEEQWSRFIFIQGDIRKFTDC 84 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCC-------EEEEEeCCCC-cchh-hhhhhhhccccccCCceEEEEccCCCHHHH
Confidence 357999999999999999999998763 7889987531 1000 000110 000000011111 1123
Q ss_pred hhhcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCC
Q 020022 76 VEACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIP 149 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~ 149 (332)
.+.++++|+|||+|+....+ ..+..+....|+....++.+.+++...+ .+|++|.. .+... ...+..+ ..
T Consensus 85 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~--~~v~~SS~-~vyg~~~~~~~~e~~~-~~ 160 (348)
T PRK15181 85 QKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS--SFTYAASS-STYGDHPDLPKIEERI-GR 160 (348)
T ss_pred HHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC--eEEEeech-HhhCCCCCCCCCCCCC-CC
Confidence 45578999999999864322 2344567889999999999999887533 46655532 11000 0001001 12
Q ss_pred CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (332)
Q Consensus 150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg 189 (332)
+...++.+.+...++...+++..+++...++...|+|.+.
T Consensus 161 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 161 PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred CCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 3346788888888877777888899999999888889753
No 55
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.70 E-value=2.3e-07 Score=85.52 Aligned_cols=107 Identities=22% Similarity=0.249 Sum_probs=73.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHH---hhh-----hcC-------Cccc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL---VDA-----AFP-------LLKG 68 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl---~~~-----~~~-------~~~~ 68 (332)
..+||+|+| +|.+|+.+|..++..|. +|+++|+++ +.++.....+ .+. ... ...+
T Consensus 2 ~~~kIaViG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (287)
T PRK08293 2 DIKNVTVAG-AGVLGSQIAFQTAFHGF-------DVTIYDISD--EALEKAKERIAKLADRYVRDLEATKEAPAEAALNR 71 (287)
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcC
Confidence 346999999 69999999999998763 799999985 3332111111 110 000 1236
Q ss_pred eEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 69 VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 69 ~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
++.+++..+++++||+||.+. ..+.+..+++.+.+.+++++++ |+++|.+..
T Consensus 72 i~~~~d~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~--ii~sntSt~ 123 (287)
T PRK08293 72 ITLTTDLAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKT--IFATNSSTL 123 (287)
T ss_pred eEEeCCHHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCC--EEEECcccC
Confidence 677788888899999999984 2456777888888988887765 345666554
No 56
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.70 E-value=2.4e-07 Score=95.44 Aligned_cols=156 Identities=20% Similarity=0.222 Sum_probs=102.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hh--H-HHHhhhh----c------CCccceEe
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GV--K-MELVDAA----F------PLLKGVVA 71 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~--~-~dl~~~~----~------~~~~~~~~ 71 (332)
.||+||| +|.||..+|..++..|+ +++|+|+++ +.++ +. . ..+.... . ....+++.
T Consensus 314 ~~v~ViG-aG~mG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~ 383 (715)
T PRK11730 314 KQAAVLG-AGIMGGGIAYQSASKGV-------PVIMKDINQ--KALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRP 383 (715)
T ss_pred ceEEEEC-CchhHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE
Confidence 6899999 69999999999998875 799999985 3332 11 1 1111100 0 01246777
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C---
Q 020022 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P--- 146 (332)
Q Consensus 72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~--- 146 (332)
+++. +++++||+||.+. .+++++.+++...++++|+|++ |+.||.+.+ ++.++.... +
T Consensus 384 ~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la~~~~~p~r~ 446 (715)
T PRK11730 384 TLDY-AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDT--ILASNTSTISISLLAKALKRPENF 446 (715)
T ss_pred eCCH-HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHHhhcCCCccE
Confidence 7765 7799999999983 5688999999999999998875 679998875 444444321 0
Q ss_pred -C---C-CCC--c---E--EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC
Q 020022 147 -S---I-PAK--N---I--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS 190 (332)
Q Consensus 147 -~---~-~~~--~---i--~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~ 190 (332)
| + |+. + | +..|.-++......+++.+|..|--++..+ |...+
T Consensus 447 ~g~Hff~P~~~~~lVEvv~g~~T~~~~~~~~~~~~~~lgk~pv~v~d~p--Gfv~n 500 (715)
T PRK11730 447 CGMHFFNPVHRMPLVEVIRGEKTSDETIATVVAYASKMGKTPIVVNDCP--GFFVN 500 (715)
T ss_pred EEEecCCcccccceEEeeCCCCCCHHHHHHHHHHHHHhCCceEEecCcC--chhHH
Confidence 0 1 222 1 1 223555665555566788887766655443 54443
No 57
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.67 E-value=3.6e-07 Score=93.93 Aligned_cols=151 Identities=17% Similarity=0.198 Sum_probs=98.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhH----HHHhhhhc----------CCccce
Q 020022 5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVK----MELVDAAF----------PLLKGV 69 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~----~dl~~~~~----------~~~~~~ 69 (332)
.+||+||| +|.||+.+|..++. .|+ +|+|+|+++ +.+..-. ..+..... ....++
T Consensus 304 i~~v~ViG-aG~mG~~iA~~~a~~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 373 (699)
T TIGR02440 304 IKKVGILG-GGLMGGGIASVTATKAGI-------PVRIKDINP--QGINNALKYAWKLLDKGVKRRHMTPAERDNQMALI 373 (699)
T ss_pred ccEEEEEC-CcHHHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCe
Confidence 36899999 69999999998874 664 799999985 3332111 11111100 012467
Q ss_pred EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C-
Q 020022 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P- 146 (332)
Q Consensus 70 ~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~- 146 (332)
+.+++. +++++||+||.+. .+++++.+++..+++++|+|++ |+.||.+.+ ++.++.... +
T Consensus 374 ~~~~~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~l~i~~la~~~~~p~ 436 (699)
T TIGR02440 374 TGTTDY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHT--IFASNTSSLPIGQIAAAASRPE 436 (699)
T ss_pred EEeCCh-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCc--EEEeCCCCCCHHHHHHhcCCcc
Confidence 777765 6899999999983 4678999999999999998875 678998775 444444321 1
Q ss_pred ---C---C-CCC--c---E--EEechHHHHHHHHHHHHHcCCCCCCeeee
Q 020022 147 ---S---I-PAK--N---I--TCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (332)
Q Consensus 147 ---~---~-~~~--~---i--~~~t~lds~r~~~~la~~l~v~~~~v~~~ 182 (332)
| + |+. + | +..|.-++......+.+.+|..|--|+..
T Consensus 437 r~~g~HffnP~~~~~lVEvv~g~~T~~~~~~~~~~~~~~~gk~pv~v~d~ 486 (699)
T TIGR02440 437 NVIGLHYFSPVEKMPLVEVIPHAGTSEQTIATTVALAKKQGKTPIVVADK 486 (699)
T ss_pred cEEEEecCCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEccc
Confidence 0 1 322 1 2 22366666555566778888776655433
No 58
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.65 E-value=2.3e-07 Score=95.73 Aligned_cols=149 Identities=19% Similarity=0.225 Sum_probs=99.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hh--HH-HHhhhhc----------CCccceE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GV--KM-ELVDAAF----------PLLKGVV 70 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~--~~-dl~~~~~----------~~~~~~~ 70 (332)
..||+||| +|.||+.++..++..|+ +|+|+|+++ +.+. +. .. .+..... ....+++
T Consensus 335 i~~v~ViG-aG~MG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~ 404 (737)
T TIGR02441 335 VKTLAVLG-AGLMGAGIAQVSVDKGL-------KTVLKDATP--AGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLT 404 (737)
T ss_pred ccEEEEEC-CCHhHHHHHHHHHhCCC-------cEEEecCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE
Confidence 36899999 69999999999998875 799999985 3332 11 11 1111100 0124677
Q ss_pred eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C--
Q 020022 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P-- 146 (332)
Q Consensus 71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~-- 146 (332)
.+++. +++++||+||.+. .+|.++.+++...++++|+|++ |+.||.+.+ ++.++.... +
T Consensus 405 ~~~~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la~~~~~p~r 467 (737)
T TIGR02441 405 PTLDY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHC--IIASNTSALPIKDIAAVSSRPEK 467 (737)
T ss_pred EeCCH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHHhhcCCccc
Confidence 77765 6899999999883 5789999999999999998886 568998775 344444321 0
Q ss_pred --C---C-CCC--c---E--EEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 147 --S---I-PAK--N---I--TCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 147 --~---~-~~~--~---i--~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
| + |+. + | +..|.-++......+++.+|..|--++
T Consensus 468 ~ig~Hff~P~~~m~LvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v~ 514 (737)
T TIGR02441 468 VIGMHYFSPVDKMQLLEIITHDGTSKDTLASAVAVGLKQGKVVIVVK 514 (737)
T ss_pred eEEEeccCCcccCceEEEeCCCCCCHHHHHHHHHHHHHCCCeEEEEC
Confidence 1 1 322 1 2 224666665556677888887665444
No 59
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.64 E-value=3.6e-07 Score=94.18 Aligned_cols=151 Identities=17% Similarity=0.236 Sum_probs=100.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHH-hcccCCCCCceEEEEEeCCCchhhhhhh---HHH-Hhhhhc----------CCccce
Q 020022 5 PVRVLVTGAAGQIGYALVPMIA-RGVMLGTDQPVILHMLDIPPAAEALNGV---KME-LVDAAF----------PLLKGV 69 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~l~~~---~~d-l~~~~~----------~~~~~~ 69 (332)
.+||+||| +|.+|..+|..++ ..|+ +|+|+|+++ +.+..- ..+ +..... ....++
T Consensus 309 i~~v~ViG-aG~mG~giA~~~a~~~G~-------~V~l~d~~~--~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 378 (708)
T PRK11154 309 VNKVGVLG-GGLMGGGIAYVTATKAGL-------PVRIKDINP--QGINHALKYSWDLLDKKVKRRHLKPSERDKQMALI 378 (708)
T ss_pred ccEEEEEC-CchhhHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcE
Confidence 36999999 6999999999988 6664 799999985 323211 111 111000 112467
Q ss_pred EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C-
Q 020022 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P- 146 (332)
Q Consensus 70 ~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~- 146 (332)
+.+++. +++++||+||.+. .+|.++.+++...++++++|++ |+.||.+.+ ++.++.... +
T Consensus 379 ~~~~~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~--ilasnTS~l~i~~la~~~~~p~ 441 (708)
T PRK11154 379 SGTTDY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHT--IFASNTSSLPIGQIAAAAARPE 441 (708)
T ss_pred EEeCCh-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHHhcCccc
Confidence 787765 7899999999983 5789999999999999998886 568998775 444443321 1
Q ss_pred ---C---C-CCC--c---E--EEechHHHHHHHHHHHHHcCCCCCCeeee
Q 020022 147 ---S---I-PAK--N---I--TCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (332)
Q Consensus 147 ---~---~-~~~--~---i--~~~t~lds~r~~~~la~~l~v~~~~v~~~ 182 (332)
| + |+. + | +..|.-++......+.+.+|..|--++..
T Consensus 442 r~ig~Hff~P~~~~~lVEvv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~d~ 491 (708)
T PRK11154 442 QVIGLHYFSPVEKMPLVEVIPHAKTSAETIATTVALAKKQGKTPIVVRDG 491 (708)
T ss_pred ceEEEecCCccccCceEEEECCCCCCHHHHHHHHHHHHHcCCceEEEecc
Confidence 1 1 332 1 2 23466666666666778888876655433
No 60
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.64 E-value=4.5e-07 Score=88.57 Aligned_cols=165 Identities=14% Similarity=0.048 Sum_probs=101.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC-hhhhcCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD-AVEACTG 81 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~-~~~al~~ 81 (332)
+.|||.|+||+||||++++..|+..|. +|+.+|.... . ....... +... .++.. ..| ...++.+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~-------~V~~ld~~~~-~-~~~~~~~--~~~~---~~~~~i~~D~~~~~l~~ 183 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGD-------SVIVVDNFFT-G-RKENVMH--HFSN---PNFELIRHDVVEPILLE 183 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcC-------EEEEEeCCCc-c-chhhhhh--hccC---CceEEEECCccChhhcC
Confidence 458999999999999999999998763 7888886421 1 1111111 1100 11111 112 2345678
Q ss_pred CcEEEEeCCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH------HHHhCCC-C-C--
Q 020022 82 VNIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI------LKEFAPS-I-P-- 149 (332)
Q Consensus 82 aDiVi~~ag~~~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~------~~~~~~~-~-~-- 149 (332)
+|+|||+|+... ....+..+.+..|+....++.+.+++.. +++|++|.-. .|- ..+...+ . |
T Consensus 184 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g---~r~V~~SS~~---VYg~~~~~p~~E~~~~~~~P~~ 257 (442)
T PLN02206 184 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSE---VYGDPLQHPQVETYWGNVNPIG 257 (442)
T ss_pred CCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECChH---HhCCCCCCCCCccccccCCCCC
Confidence 999999998542 1123456778899999999999988764 3566665421 110 0000000 0 1
Q ss_pred CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
+...++.++....++...+.+..+++..-++...|+|.+
T Consensus 258 ~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~ 296 (442)
T PLN02206 258 VRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPR 296 (442)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 123566777777777666677778887777777778864
No 61
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.61 E-value=4.1e-08 Score=89.50 Aligned_cols=167 Identities=20% Similarity=0.188 Sum_probs=94.1
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c--------CCccceEeeCChhhh
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F--------PLLKGVVATTDAVEA 78 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~--------~~~~~~~~~~~~~~a 78 (332)
|.||||+|++|+.++..|+..+- -+|+++|+++ ..+.....++.... . +...+++.......+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p------~~lil~d~~E--~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~ 72 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP------KKLILFDRDE--NKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRI 72 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-------SEEEEEES-H--HHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCC------CeEEEeCCCh--hHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHH
Confidence 78999999999999999998652 2799999985 45555555553211 0 011222222234567
Q ss_pred cC--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEE
Q 020022 79 CT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT 154 (332)
Q Consensus 79 l~--~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~ 154 (332)
++ +.|+|+|+|....-+ .....+-+..|+--.+++++...++.. .-.|.+.|.-+ ..|.++.
T Consensus 73 ~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v-~~~v~ISTDKA-------------v~Ptnvm 138 (293)
T PF02719_consen 73 FEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGV-ERFVFISTDKA-------------VNPTNVM 138 (293)
T ss_dssp TT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGC-------------SS--SHH
T ss_pred HhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEcccccc-------------CCCCcHH
Confidence 77 899999999875422 235677889999999999999999874 33343333210 1223344
Q ss_pred EechHHHHHHHHHHHHHc---CCCCCCeeeeEEEeccCCceeecCC
Q 020022 155 CLTRLDHNRALGQISEKL---NVQVSDVKNVIIWGNHSSSQYPDVN 197 (332)
Q Consensus 155 ~~t~lds~r~~~~la~~l---~v~~~~v~~~~v~G~hg~~~v~~~S 197 (332)
|.|..-..++-...++.. +.....|+.-+|+|..| |-+|.|-
T Consensus 139 GatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G-SVip~F~ 183 (293)
T PF02719_consen 139 GATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG-SVIPLFK 183 (293)
T ss_dssp HHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT-SCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC-cHHHHHH
Confidence 555555555555555444 22334455555555433 5556554
No 62
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.59 E-value=7.5e-07 Score=83.77 Aligned_cols=174 Identities=11% Similarity=0.109 Sum_probs=103.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cCC----ccceEeeCChhhh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPL----LKGVVATTDAVEA 78 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~~----~~~~~~~~~~~~a 78 (332)
+++||.|+||+|++|++++..|+..|. +|++++++.. ... ...++.... .+. ..+++-.....++
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~-------~V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 77 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGY-------AVNTTVRDPE--NQK-KIAHLRALQELGDLKIFGADLTDEESFEAP 77 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCC-------EEEEEECCCC--CHH-HHHHHHhcCCCCceEEEEcCCCChHHHHHH
Confidence 457999999999999999999998763 6766666531 111 111111110 000 0111111234566
Q ss_pred cCCCcEEEEeCCCCCCCCCC-HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH-------HHHHH-------
Q 020022 79 CTGVNIAVMVGGFPRKEGME-RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-------LILKE------- 143 (332)
Q Consensus 79 l~~aDiVi~~ag~~~~~~~~-r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~-------~~~~~------- 143 (332)
++++|+||++|+.......+ ..+++..|+.....+.+.+.+.... .++|++|.-...-. ..+.+
T Consensus 78 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~-~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~ 156 (338)
T PLN00198 78 IAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSV-KRVILTSSAAAVSINKLSGTGLVMNEKNWTDVE 156 (338)
T ss_pred HhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEeecceeeeccCCCCCCceeccccCCchh
Confidence 78999999999853222122 2346688999999999998876422 35666554211000 00000
Q ss_pred -hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 144 -FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 144 -~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
.....++...++.++....++...+++..+++..-++...|+|.+
T Consensus 157 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 157 FLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS 202 (338)
T ss_pred hhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence 000012334577788888888778888889888888878888864
No 63
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.59 E-value=1.6e-07 Score=86.28 Aligned_cols=115 Identities=20% Similarity=0.247 Sum_probs=78.5
Q ss_pred EEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhhcCCCcEEE
Q 020022 9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTGVNIAV 86 (332)
Q Consensus 9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~al~~aDiVi 86 (332)
.||||+||+|++++..|+..+-. .+|+.+|+.+...... ++..... .....++-..+..+|+++||+||
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~-----~~Vr~~d~~~~~~~~~----~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~ 71 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYI-----YEVRVLDRSPPPKFLK----DLQKSGVKEYIQGDITDPESLEEALEGVDVVF 71 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCc-----eEEEEcccccccccch----hhhcccceeEEEeccccHHHHHHHhcCCceEE
Confidence 48999999999999999987632 2799999875322111 1221110 11223334456789999999999
Q ss_pred EeCCCCCCCC-CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022 87 MVGGFPRKEG-MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (332)
Q Consensus 87 ~~ag~~~~~~-~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~ 135 (332)
|+|......+ .+.+.+...|+...+++.+...+... +.+|+|..+.
T Consensus 72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~V---krlVytSS~~ 118 (280)
T PF01073_consen 72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGV---KRLVYTSSIS 118 (280)
T ss_pred EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCC---CEEEEEcCcc
Confidence 9998643333 45777889999999999999988753 3345554443
No 64
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.57 E-value=3.4e-07 Score=87.42 Aligned_cols=173 Identities=14% Similarity=0.127 Sum_probs=103.0
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a 82 (332)
...|||+|+||+|++|++++..|+..|. +|..+|+..+ ..+.... +.. . .....+.......++++++
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~-------~V~~v~r~~~-~~~~~~~--~~~-~-~~~~Dl~d~~~~~~~~~~~ 86 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGH-------YIIASDWKKN-EHMSEDM--FCH-E-FHLVDLRVMENCLKVTKGV 86 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCC-------EEEEEEeccc-ccccccc--ccc-e-EEECCCCCHHHHHHHHhCC
Confidence 3468999999999999999999998763 7889987531 1111000 000 0 0000111111234557899
Q ss_pred cEEEEeCCCCCCCC---CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch-HH------HHHHhCC-CCCCC
Q 020022 83 NIAVMVGGFPRKEG---MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN-AL------ILKEFAP-SIPAK 151 (332)
Q Consensus 83 DiVi~~ag~~~~~~---~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~-~~------~~~~~~~-~~~~~ 151 (332)
|+||++|+.....+ ......+..|+....++++.+++... . ++|++|...-.- .. -+.+-.+ ...+.
T Consensus 87 D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~v-k-~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~ 164 (370)
T PLN02695 87 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGV-K-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 164 (370)
T ss_pred CEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCC-C-EEEEeCchhhcCCccccCcCCCcCcccCCCCCCC
Confidence 99999987532111 12234567899999999999887753 2 466665421000 00 0000000 12233
Q ss_pred cEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022 152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (332)
Q Consensus 152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg 189 (332)
..++.+.....++....++..+++..-++...|+|.++
T Consensus 165 s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 165 DAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 46677788877777777888899888888888889765
No 65
>PLN02650 dihydroflavonol-4-reductase
Probab=98.56 E-value=1.1e-06 Score=83.19 Aligned_cols=177 Identities=15% Similarity=0.118 Sum_probs=105.5
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-C----CccceEeeCC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-P----LLKGVVATTD 74 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~----~~~~~~~~~~ 74 (332)
|-...++|.|+||+|++|++++..|+..|. +|++++++. +.+... .++.... . . ...++.....
T Consensus 1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~-------~V~~~~r~~--~~~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~ 70 (351)
T PLN02650 1 MGSQKETVCVTGASGFIGSWLVMRLLERGY-------TVRATVRDP--ANVKKV-KHLLDLPGATTRLTLWKADLAVEGS 70 (351)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHCCC-------EEEEEEcCc--chhHHH-HHHHhccCCCCceEEEEecCCChhh
Confidence 545667999999999999999999998763 677777653 222111 1111100 0 0 0011111223
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCC-HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH-----HHHHHhCCC-
Q 020022 75 AVEACTGVNIAVMVGGFPRKEGME-RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-----LILKEFAPS- 147 (332)
Q Consensus 75 ~~~al~~aDiVi~~ag~~~~~~~~-r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~-----~~~~~~~~~- 147 (332)
..++++++|+|||+|+.......+ ..+.+..|+....++.+.+.+... -.++|++|.....-. ....+....
T Consensus 71 ~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~ 149 (351)
T PLN02650 71 FDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKT-VRRIVFTSSAGTVNVEEHQKPVYDEDCWSD 149 (351)
T ss_pred HHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCC-ceEEEEecchhhcccCCCCCCccCcccCCc
Confidence 456788999999999754322212 235678899999999999887642 235666654311100 000000000
Q ss_pred -----CC--CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 148 -----IP--AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 148 -----~~--~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
.+ +...++.+......+...+++..|++..-++...|+|..
T Consensus 150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~ 197 (351)
T PLN02650 150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPF 197 (351)
T ss_pred hhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCC
Confidence 00 112466777877777777888889888888877788864
No 66
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.56 E-value=5.9e-07 Score=92.51 Aligned_cols=157 Identities=20% Similarity=0.240 Sum_probs=103.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hh--HHH-Hhhhhc----------CCccceE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GV--KME-LVDAAF----------PLLKGVV 70 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~--~~d-l~~~~~----------~~~~~~~ 70 (332)
.+||+||| +|.||..+|..++..|+ +++|+|+++ +.+. +. ... +..... ....+++
T Consensus 313 i~~v~ViG-aG~mG~gIA~~~a~~G~-------~V~l~d~~~--~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 382 (714)
T TIGR02437 313 VKQAAVLG-AGIMGGGIAYQSASKGT-------PIVMKDINQ--HSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGIT 382 (714)
T ss_pred cceEEEEC-CchHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeE
Confidence 46999999 69999999999998875 899999985 3332 11 111 111000 0124677
Q ss_pred eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhC-C--
Q 020022 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFA-P-- 146 (332)
Q Consensus 71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~-~-- 146 (332)
.+++. +++++||+||.+. .+++++.+++..+++++|+|++ |+.||.+.+ ++.++.... +
T Consensus 383 ~~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasnTS~l~i~~ia~~~~~p~r 445 (714)
T TIGR02437 383 PTLSY-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDA--ILASNTSTISISLLAKALKRPEN 445 (714)
T ss_pred EeCCH-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHhhcCCccc
Confidence 77665 7799999999984 5688999999999999998886 679998875 444443321 0
Q ss_pred --C---C-CCCc-----E--EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC
Q 020022 147 --S---I-PAKN-----I--TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS 190 (332)
Q Consensus 147 --~---~-~~~~-----i--~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~ 190 (332)
| | |+.. | +..|.-++......+++.+|..|--++..+ |..++
T Consensus 446 ~ig~Hff~P~~~~~lvEvv~g~~Ts~~~~~~~~~~~~~lgk~pv~v~d~p--Gfi~N 500 (714)
T TIGR02437 446 FCGMHFFNPVHRMPLVEVIRGEKSSDETIATVVAYASKMGKTPIVVNDCP--GFFVN 500 (714)
T ss_pred EEEEecCCCcccCceEeecCCCCCCHHHHHHHHHHHHHcCCEEEEeCCcc--cchHH
Confidence 1 1 3221 2 224666665556667788887766555333 55444
No 67
>PLN02427 UDP-apiose/xylose synthase
Probab=98.56 E-value=4.3e-07 Score=87.14 Aligned_cols=169 Identities=11% Similarity=0.100 Sum_probs=99.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceE-------eeCCh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVV-------ATTDA 75 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~-------~~~~~ 75 (332)
++|||.||||+||+|++++..|+..+- .+|+.+|++. +... .+..... ....+++ -....
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g------~~V~~l~r~~--~~~~----~l~~~~~~~~~~~~~~~~~Dl~d~~~l 80 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETP------HKVLALDVYN--DKIK----HLLEPDTVPWSGRIQFHRINIKHDSRL 80 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCC------CEEEEEecCc--hhhh----hhhccccccCCCCeEEEEcCCCChHHH
Confidence 468999999999999999999998631 1788888753 2211 1110000 0001111 11234
Q ss_pred hhhcCCCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCC---
Q 020022 76 VEACTGVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAP--- 146 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~--- 146 (332)
.++++++|+|||+|+..... ..+..+.+..|+....++.+..++.. .++|++|... +... ...+-.+
T Consensus 81 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS~~-vYg~~~~~~~~e~~p~~~ 156 (386)
T PLN02427 81 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCE-VYGKTIGSFLPKDHPLRQ 156 (386)
T ss_pred HHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEeeee-eeCCCcCCCCCccccccc
Confidence 56788999999999864321 12334556778888888888877654 3566666421 1000 0000000
Q ss_pred ---------C-----C----CCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 147 ---------S-----I----PAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 147 ---------~-----~----~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
. + .+...++.+.....++....++..+++..-++...|+|.+
T Consensus 157 ~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 216 (386)
T PLN02427 157 DPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 216 (386)
T ss_pred ccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCC
Confidence 0 0 0112456677777777766777778888888887788864
No 68
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.54 E-value=9.3e-07 Score=81.67 Aligned_cols=107 Identities=16% Similarity=0.216 Sum_probs=68.5
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh----h----hhcC------Cccc
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV----D----AAFP------LLKG 68 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~----~----~~~~------~~~~ 68 (332)
++.+||+||| +|.+|..++..|+..|. +|+++|+++ +.++.....+. . ...+ ...+
T Consensus 2 ~~~~kI~vIG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~ 71 (292)
T PRK07530 2 MAIKKVGVIG-AGQMGNGIAHVCALAGY-------DVLLNDVSA--DRLEAGLATINGNLARQVAKGKISEEARAAALAR 71 (292)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhC
Confidence 3457999999 69999999999998764 799999985 33322111111 1 1000 0134
Q ss_pred eEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 69 VVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 69 ~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
++.+++. +++++||+||.+. ..+..+.+.+...+.+++++++++ +||.+.+
T Consensus 72 i~~~~~~-~~~~~aD~Vieav--------------pe~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~ 122 (292)
T PRK07530 72 ISTATDL-EDLADCDLVIEAA--------------TEDETVKRKIFAQLCPVLKPEAIL--ATNTSSI 122 (292)
T ss_pred eEeeCCH-HHhcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEcCCCC
Confidence 5666655 6789999999984 123345556667788888777643 4555543
No 69
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.54 E-value=1.2e-06 Score=80.42 Aligned_cols=111 Identities=22% Similarity=0.329 Sum_probs=72.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhH------HHHhhhh-c------CCccceE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVK------MELVDAA-F------PLLKGVV 70 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~------~dl~~~~-~------~~~~~~~ 70 (332)
.+||+||| +|.||..++..++..|. +++++|+++ +.++ +.. ..+.+.. . ....+++
T Consensus 3 ~~kI~VIG-~G~mG~~ia~~la~~g~-------~V~~~d~~~--~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~ 72 (282)
T PRK05808 3 IQKIGVIG-AGTMGNGIAQVCAVAGY-------DVVMVDISD--AAVDRGLATITKSLDRLVKKGKMTEADKEAALARIT 72 (282)
T ss_pred ccEEEEEc-cCHHHHHHHHHHHHCCC-------ceEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE
Confidence 34899999 69999999999998764 699999985 3332 110 0111000 0 0113566
Q ss_pred eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~ 142 (332)
.+++. +++++||+||+++ ..+....+++.+.+.++++|+++ +.||...+....+.
T Consensus 73 ~~~~~-~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~i--l~s~ts~~~~~~la 127 (282)
T PRK05808 73 GTTDL-DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAI--LATNTSSLSITELA 127 (282)
T ss_pred EeCCH-HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHHH
Confidence 66665 5689999999984 34567777888889999877763 36766654333333
No 70
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.52 E-value=1.4e-06 Score=80.51 Aligned_cols=105 Identities=16% Similarity=0.255 Sum_probs=69.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH-------Hhhhhc--C--------Ccc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME-------LVDAAF--P--------LLK 67 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d-------l~~~~~--~--------~~~ 67 (332)
..||+|+| +|.+|..++..++..|. +|+++|+++ +.++..... +..... . ...
T Consensus 3 i~~I~ViG-aG~mG~~iA~~la~~G~-------~V~l~d~~~--~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~ 72 (291)
T PRK06035 3 IKVIGVVG-SGVMGQGIAQVFARTGY-------DVTIVDVSE--EILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMA 72 (291)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHh
Confidence 46899999 69999999999998764 799999985 333211111 111000 0 012
Q ss_pred ceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 68 GVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 68 ~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
++..+++. +++++||+||.+. ..+.++.+++.+.+.++++++++ ++||...+
T Consensus 73 ~i~~~~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~i--l~S~tsg~ 124 (291)
T PRK06035 73 RIRTSTSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETI--IASNTSGI 124 (291)
T ss_pred CcEeeCCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeE--EEEcCCCC
Confidence 34555555 6789999999984 23456667888888888877763 35665554
No 71
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.51 E-value=4.5e-07 Score=75.99 Aligned_cols=97 Identities=20% Similarity=0.233 Sum_probs=65.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc------CCccceEeeCChhhhcC
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF------PLLKGVVATTDAVEACT 80 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~------~~~~~~~~~~~~~~al~ 80 (332)
||+|+| +|..|.++|..|...+. ++.|+++++ +.++.. .-.+... .+..++..++|++++++
T Consensus 1 KI~ViG-aG~~G~AlA~~la~~g~-------~V~l~~~~~--~~~~~i--~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~ 68 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLADNGH-------EVTLWGRDE--EQIEEI--NETRQNPKYLPGIKLPENIKATTDLEEALE 68 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHHCTE-------EEEEETSCH--HHHHHH--HHHTSETTTSTTSBEETTEEEESSHHHHHT
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC-------EEEEEeccH--HHHHHH--HHhCCCCCCCCCcccCcccccccCHHHHhC
Confidence 899999 69999999999999873 899999974 333221 1112211 12357888999999999
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
+||+||++. | ....+++++.+..+-.++..+++++
T Consensus 69 ~ad~Iiiav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~~ 103 (157)
T PF01210_consen 69 DADIIIIAV--P--------------SQAHREVLEQLAPYLKKGQIIISAT 103 (157)
T ss_dssp T-SEEEE-S-----------------GGGHHHHHHHHTTTSHTT-EEEETS
T ss_pred cccEEEecc--c--------------HHHHHHHHHHHhhccCCCCEEEEec
Confidence 999999983 1 2335677788888765555555443
No 72
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.49 E-value=1.3e-06 Score=86.63 Aligned_cols=147 Identities=16% Similarity=0.195 Sum_probs=89.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH---H-HHhhhhc----------CCccce
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK---M-ELVDAAF----------PLLKGV 69 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~---~-dl~~~~~----------~~~~~~ 69 (332)
+..||+||| +|.||+.+|..++..|. +++++|+++ +.++... . .+..... ....++
T Consensus 6 ~i~~V~VIG-aG~MG~gIA~~la~aG~-------~V~l~D~~~--e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i 75 (507)
T PRK08268 6 SIATVAVIG-AGAMGAGIAQVAAQAGH-------TVLLYDARA--GAAAAARDGIAARLAKLVEKGKLTAEQADAALARL 75 (507)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCe
Confidence 347999999 69999999999998774 899999985 3333211 1 1111000 012346
Q ss_pred EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-hHHHHHHhCC--
Q 020022 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-NALILKEFAP-- 146 (332)
Q Consensus 70 ~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-~~~~~~~~~~-- 146 (332)
+.+++. +++++||+||.+. .++.++.+.+...+.+.+++++ |+.||.+.+ .+.+......
T Consensus 76 ~~~~~~-~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~a--ilasntStl~i~~la~~~~~p~ 138 (507)
T PRK08268 76 RPVEAL-ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDC--ILATNTSSLSITAIAAALKHPE 138 (507)
T ss_pred EEeCCH-HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHhhcCCcc
Confidence 666665 5688999999983 4567778888888999987776 445665543 2333332210
Q ss_pred ---C---C-CC--Cc---EEEe--chHHHHHHHHHHHHHcCCCCC
Q 020022 147 ---S---I-PA--KN---ITCL--TRLDHNRALGQISEKLNVQVS 177 (332)
Q Consensus 147 ---~---~-~~--~~---i~~~--t~lds~r~~~~la~~l~v~~~ 177 (332)
| + |. .+ +.++ |.-++......+.+.+|..|-
T Consensus 139 r~~G~hff~Pa~v~~LvEvv~g~~Ts~~~~~~~~~l~~~lgk~pv 183 (507)
T PRK08268 139 RVAGLHFFNPVPLMKLVEVVSGLATDPAVADALYALARAWGKTPV 183 (507)
T ss_pred cEEEEeecCCcccCeeEEEeCCCCCCHHHHHHHHHHHHHcCCceE
Confidence 1 1 11 12 2222 555554445566788886543
No 73
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.46 E-value=1.6e-06 Score=81.26 Aligned_cols=172 Identities=13% Similarity=0.143 Sum_probs=100.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~a 82 (332)
+.++|.|+||+|++|++++..|+..+-. .+|+++|++. ........++..... ....++.-.....++++++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~-----~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~i 75 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNP-----KKIIIYSRDE--LKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGV 75 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCC-----cEEEEEcCCh--hHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcC
Confidence 3568999999999999999999876410 1688888763 111111111111000 0001111112345677889
Q ss_pred cEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEechHH
Q 020022 83 NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLD 160 (332)
Q Consensus 83 DiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~t~ld 160 (332)
|+||++||....+ ..+..+.+..|+.....+.+.+.+... .++|++|.-. ...+...++.+...
T Consensus 76 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~--~~iV~~SS~~------------~~~p~~~Y~~sK~~ 141 (324)
T TIGR03589 76 DYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGV--KRVVALSTDK------------AANPINLYGATKLA 141 (324)
T ss_pred CEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEEeCCC------------CCCCCCHHHHHHHH
Confidence 9999999875322 234567889999999999999987652 3566665311 11112234555555
Q ss_pred HHHHHHHHH---HHcCCCCCCeeeeEEEeccCCceeecCC
Q 020022 161 HNRALGQIS---EKLNVQVSDVKNVIIWGNHSSSQYPDVN 197 (332)
Q Consensus 161 s~r~~~~la---~~l~v~~~~v~~~~v~G~hg~~~v~~~S 197 (332)
..++...++ +..|++...++...|.|..+ +.+|.|-
T Consensus 142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-~~i~~~~ 180 (324)
T TIGR03589 142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-SVVPFFK 180 (324)
T ss_pred HHHHHHHHHhhccccCcEEEEEeecceeCCCC-CcHHHHH
Confidence 555544433 34577777777666777533 3344433
No 74
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.46 E-value=2.1e-06 Score=79.19 Aligned_cols=104 Identities=19% Similarity=0.317 Sum_probs=67.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHh----hhh-c---------CCccceEe
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELV----DAA-F---------PLLKGVVA 71 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~----~~~-~---------~~~~~~~~ 71 (332)
.||+||| +|.+|..+|..|+..|. +|+++|+++ +.++.....+. ... . ....+++.
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la~~G~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 71 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFAVSGF-------QTTLVDIKQ--EQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY 71 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhCCC-------cEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE
Confidence 5899999 69999999999998763 799999985 34432211111 110 0 01124666
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (332)
Q Consensus 72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~ 135 (332)
+++..+++++||+||.+.. .+..+.+.+...+.++++|+++ +++|...
T Consensus 72 ~~~~~~~~~~aD~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~i--l~~~tSt 119 (288)
T PRK09260 72 SLDLKAAVADADLVIEAVP--------------EKLELKKAVFETADAHAPAECY--IATNTST 119 (288)
T ss_pred eCcHHHhhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCcE--EEEcCCC
Confidence 7777889999999999842 2345556666678888877753 3444433
No 75
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.45 E-value=1.6e-06 Score=80.05 Aligned_cols=167 Identities=17% Similarity=0.173 Sum_probs=102.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC-cEE
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV-NIA 85 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a-DiV 85 (332)
+|.|+||+||+|++++..|++.|. +|+.+|+.... ..... .+.... ...+.-.....++++++ |.|
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~---~~~~~~-~~d~~~~~~~~~~~~~~~d~v 68 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGH-------DVRGLDRLRDG--LDPLL---SGVEFV-VLDLTDRDLVDELAKGVPDAV 68 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCC-------eEEEEeCCCcc--ccccc---ccccee-eecccchHHHHHHHhcCCCEE
Confidence 499999999999999999998753 79999986421 11000 011100 00000112234556677 999
Q ss_pred EEeCCCCCCCCCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH-H----HHHHh-CCCCCCCcEEEe
Q 020022 86 VMVGGFPRKEGMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-L----ILKEF-APSIPAKNITCL 156 (332)
Q Consensus 86 i~~ag~~~~~~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~-~----~~~~~-~~~~~~~~i~~~ 156 (332)
|++|+....++..+ .++...|+...+++.+..++... .+++..| .....- . .+.+- .+-.|.. .++.
T Consensus 69 ih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~--~~~v~~s-s~~~~~~~~~~~~~~E~~~~~~p~~-~Yg~ 144 (314)
T COG0451 69 IHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV--KRFVFAS-SVSVVYGDPPPLPIDEDLGPPRPLN-PYGV 144 (314)
T ss_pred EEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC--CeEEEeC-CCceECCCCCCCCcccccCCCCCCC-HHHH
Confidence 99998765444322 35889999999999999998432 3454433 322111 0 11110 0111111 3677
Q ss_pred chHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC
Q 020022 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS 190 (332)
Q Consensus 157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~ 190 (332)
+++...+.....++..+++..-++...|+|.+..
T Consensus 145 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 145 SKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence 8888888877777777899899987777886543
No 76
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=98.44 E-value=1.9e-06 Score=85.21 Aligned_cols=148 Identities=22% Similarity=0.262 Sum_probs=93.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH----HHHhhhhc----------CCccceE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK----MELVDAAF----------PLLKGVV 70 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~----~dl~~~~~----------~~~~~~~ 70 (332)
..||+||| +|.||+.+|..++..|. +++++|+++ +.++... ..+..... ....+++
T Consensus 5 ~~kV~VIG-aG~MG~gIA~~la~aG~-------~V~l~d~~~--e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~ 74 (503)
T TIGR02279 5 VVTVAVIG-AGAMGAGIAQVAASAGH-------QVLLYDIRA--EALARAIAGIEARLNSLVTKGKLTAEECERTLKRLI 74 (503)
T ss_pred ccEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccE
Confidence 46899999 69999999999998874 799999985 4443211 11111110 0123566
Q ss_pred eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch-HHHHHHhC-C--
Q 020022 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN-ALILKEFA-P-- 146 (332)
Q Consensus 71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~-~~~~~~~~-~-- 146 (332)
.+++. +++++||+||.+. .++..+.+.+...+.++++|++ |+.||.+.+- +.++.... +
T Consensus 75 ~~~~~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~~--IlasnTStl~i~~iA~~~~~p~r 137 (503)
T TIGR02279 75 PVTDL-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPADT--IIASNTSSLSITAIAAGLARPER 137 (503)
T ss_pred EeCCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCe--EEEECCCCCCHHHHHHhcCcccc
Confidence 67665 6689999999983 4567888888888999997775 5678876643 33333321 0
Q ss_pred --C---C-CCC--c---EEEe--chHHHHHHHHHHHHHcCCCCCCe
Q 020022 147 --S---I-PAK--N---ITCL--TRLDHNRALGQISEKLNVQVSDV 179 (332)
Q Consensus 147 --~---~-~~~--~---i~~~--t~lds~r~~~~la~~l~v~~~~v 179 (332)
| + |+. + +.++ |.-++......+.+.+|..|--+
T Consensus 138 ~~G~HFf~Papv~~LvEvv~g~~Ts~e~~~~~~~l~~~lgk~pv~v 183 (503)
T TIGR02279 138 VAGLHFFNPAPVMALVEVVSGLATAAEVAEQLYETALAWGKQPVHC 183 (503)
T ss_pred eEEEeccCccccCceEEEeCCCCCCHHHHHHHHHHHHHcCCeeeEe
Confidence 1 1 221 2 2233 45555555566678888654433
No 77
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.44 E-value=2.7e-06 Score=79.44 Aligned_cols=177 Identities=14% Similarity=0.071 Sum_probs=105.1
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hc-C----CccceEeeCC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AF-P----LLKGVVATTD 74 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~-~----~~~~~~~~~~ 74 (332)
|....++|.|+||+|++|++++..|+..|. ++++.+++. +..... ..+... .. . ...++.-..+
T Consensus 1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~-------~V~~~~r~~--~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~ 70 (325)
T PLN02989 1 MADGGKVVCVTGASGYIASWIVKLLLFRGY-------TINATVRDP--KDRKKT-DHLLALDGAKERLKLFKADLLDEGS 70 (325)
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEEcCC--cchhhH-HHHHhccCCCCceEEEeCCCCCchH
Confidence 666678999999999999999999998763 677776653 112111 111100 00 0 0011212223
Q ss_pred hhhhcCCCcEEEEeCCCCCCC-C-CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH--------HHHHh
Q 020022 75 AVEACTGVNIAVMVGGFPRKE-G-MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL--------ILKEF 144 (332)
Q Consensus 75 ~~~al~~aDiVi~~ag~~~~~-~-~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~--------~~~~~ 144 (332)
..++++++|+||++||..... . ......+..|+.....+.+.+.++... .+||++|.-...... .+.+.
T Consensus 71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~-~~iv~~SS~~~~~~~~~~~~~~~~~~E~ 149 (325)
T PLN02989 71 FELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSV-KRVILTSSMAAVLAPETKLGPNDVVDET 149 (325)
T ss_pred HHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCc-eEEEEecchhheecCCccCCCCCccCcC
Confidence 456778899999999864321 1 223456788999999999988775322 356665542111000 00010
Q ss_pred CCCCC-----CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 145 APSIP-----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 145 ~~~~~-----~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
.+.-| +...++.++....++...+++..+++..-++...|+|..
T Consensus 150 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~ 198 (325)
T PLN02989 150 FFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI 198 (325)
T ss_pred CCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence 00001 123577788888888777788888887777877777853
No 78
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.44 E-value=3.7e-06 Score=78.34 Aligned_cols=106 Identities=14% Similarity=0.251 Sum_probs=66.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh---c------CCccceEeeCCh
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA---F------PLLKGVVATTDA 75 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~---~------~~~~~~~~~~~~ 75 (332)
.+||+||| +|.+|..++..|+..|. +|+++|+++ +.++.....+.... . ....+++.+++.
T Consensus 4 ~~~I~vIG-aG~mG~~iA~~l~~~g~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 73 (311)
T PRK06130 4 IQNLAIIG-AGTMGSGIAALFARKGL-------QVVLIDVME--GALERARGVIERALGVYAPLGIASAGMGRIRMEAGL 73 (311)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCH--HHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCH
Confidence 46899999 69999999999988763 799999874 33332211111100 0 011235566677
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
.+++++||+||++.- ......+++...+..++++++ ++.||...+
T Consensus 74 ~~~~~~aDlVi~av~--------------~~~~~~~~v~~~l~~~~~~~~--ii~s~tsg~ 118 (311)
T PRK06130 74 AAAVSGADLVIEAVP--------------EKLELKRDVFARLDGLCDPDT--IFATNTSGL 118 (311)
T ss_pred HHHhccCCEEEEecc--------------CcHHHHHHHHHHHHHhCCCCc--EEEECCCCC
Confidence 778999999999841 223445566666777776654 344655543
No 79
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.44 E-value=1.4e-06 Score=78.74 Aligned_cols=167 Identities=17% Similarity=0.145 Sum_probs=108.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhc--CCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEAC--TGV 82 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al--~~a 82 (332)
|+|.|+||+|+|||+.+..|+..|. +++.+|.-.+ +...-+...... ...++.-..-+.+.+ ..-
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~-------~vvV~DNL~~-----g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~i 68 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH-------EVVVLDNLSN-----GHKIALLKLQFKFYEGDLLDRALLTAVFEENKI 68 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC-------eEEEEecCCC-----CCHHHhhhccCceEEeccccHHHHHHHHHhcCC
Confidence 5899999999999999999999774 8999997542 211111111000 001111111122222 367
Q ss_pred cEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch----HHHHHHhCCCCCCCcEEEe
Q 020022 83 NIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN----ALILKEFAPSIPAKNITCL 156 (332)
Q Consensus 83 DiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~----~~~~~~~~~~~~~~~i~~~ 156 (332)
|.|||.||...-+. +...+++..|+--...+.+.+++++.+ .+ ++|..+.+- +.-+.+-. -..|.+-+|-
T Consensus 69 daViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~--~~-vFSStAavYG~p~~~PI~E~~-~~~p~NPYG~ 144 (329)
T COG1087 69 DAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK--KF-IFSSTAAVYGEPTTSPISETS-PLAPINPYGR 144 (329)
T ss_pred CEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC--EE-EEecchhhcCCCCCcccCCCC-CCCCCCcchh
Confidence 99999998754322 456789999999999999999999853 23 444333210 00000100 1123456899
Q ss_pred chHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
|++-+.++.+-+++..+....-.+.+++.|-|
T Consensus 145 sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~ 176 (329)
T COG1087 145 SKLMSEEILRDAAKANPFKVVILRYFNVAGAC 176 (329)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEecccccCC
Confidence 99999999999999999888888888887765
No 80
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.42 E-value=2.9e-06 Score=80.17 Aligned_cols=173 Identities=12% Similarity=0.055 Sum_probs=99.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cC-CccceEeeCChhhhcCC-
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACTG- 81 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~-~~~~~~~~~~~~~al~~- 81 (332)
.++|.|+||+|++|++++..|++.|. +|+.+|+++. ........+.... .. ...++.-..+..+.+++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGA-------EVYGYSLDPP--TSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF 74 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCC-------EEEEEeCCCc--cchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc
Confidence 46899999999999999999998763 6888887642 1111111111000 00 00111111123344554
Q ss_pred -CcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH----HHHHHhCCCCCCCcEE
Q 020022 82 -VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEFAPSIPAKNIT 154 (332)
Q Consensus 82 -aDiVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~----~~~~~~~~~~~~~~i~ 154 (332)
.|+||++|+.+.. ...+....+..|+.....+.+.+.+.+. ..++|++|...-.-. .-..+. +..++...+
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~iv~~SS~~vyg~~~~~~~~~e~-~~~~p~~~Y 152 (349)
T TIGR02622 75 KPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGS-VKAVVNVTSDKCYRNDEWVWGYRET-DPLGGHDPY 152 (349)
T ss_pred CCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCC-CCEEEEEechhhhCCCCCCCCCccC-CCCCCCCcc
Confidence 5999999985432 1123456778899999999998876541 235666665210000 000000 112233457
Q ss_pred EechHHHHHHHHHHHHHc-------CCCCCCeeeeEEEecc
Q 020022 155 CLTRLDHNRALGQISEKL-------NVQVSDVKNVIIWGNH 188 (332)
Q Consensus 155 ~~t~lds~r~~~~la~~l-------~v~~~~v~~~~v~G~h 188 (332)
+.++....++...+++.+ +++...++...|+|..
T Consensus 153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 153 SSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 778877777776677655 6666677766667753
No 81
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=98.42 E-value=2.9e-06 Score=78.52 Aligned_cols=105 Identities=24% Similarity=0.294 Sum_probs=67.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH-------HHhhhhc-------CCccceE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM-------ELVDAAF-------PLLKGVV 70 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~-------dl~~~~~-------~~~~~~~ 70 (332)
.+||+||| +|.||+.++..|+..|. +|+++|.++ +.++.... .+.+... .....+.
T Consensus 4 ~~~V~vIG-~G~mG~~iA~~l~~~G~-------~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 73 (295)
T PLN02545 4 IKKVGVVG-AGQMGSGIAQLAAAAGM-------DVWLLDSDP--AALSRGLDSISSSLARLVKKGKMSQEEADATLGRIR 73 (295)
T ss_pred cCEEEEEC-CCHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceE
Confidence 46899999 69999999999998763 799999985 33321100 1111000 0012344
Q ss_pred eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
.+++ .+++++||+||.+. .++.++.+.+...+.+++++++ |++||...+
T Consensus 74 ~~~~-~~~~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~--il~s~tS~i 122 (295)
T PLN02545 74 CTTN-LEELRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSA--ILASNTSSI 122 (295)
T ss_pred eeCC-HHHhCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCc--EEEECCCCC
Confidence 4444 46789999999984 3345666677777888877776 345665554
No 82
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.42 E-value=2e-06 Score=84.12 Aligned_cols=178 Identities=12% Similarity=0.173 Sum_probs=102.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch--h------hh---hhhHHHHh---hhh---cCC-
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--E------AL---NGVKMELV---DAA---FPL- 65 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~--~------~l---~~~~~dl~---~~~---~~~- 65 (332)
+++||.||||+||+|++++..|+..|. +|+++|..... + .+ ......+. +.. ...
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~-------~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v 118 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGY-------EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY 118 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence 357999999999999999999998763 78988843100 0 00 00000011 000 000
Q ss_pred ccceEeeCChhhhcC--CCcEEEEeCCCCCCC--CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc---
Q 020022 66 LKGVVATTDAVEACT--GVNIAVMVGGFPRKE--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN--- 135 (332)
Q Consensus 66 ~~~~~~~~~~~~al~--~aDiVi~~ag~~~~~--~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~--- 135 (332)
...+.-.....++++ ++|+|||+|+....+ ..+ ....+..|+....++.+.+++++.+ .+++.+|...-
T Consensus 119 ~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~-~~~V~~SS~~vYG~ 197 (442)
T PLN02572 119 VGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPD-CHLVKLGTMGEYGT 197 (442)
T ss_pred ECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCC-ccEEEEecceecCC
Confidence 011111112334555 489999998653221 111 1234578999999999999887632 35655442110
Q ss_pred ---chHH-HHH------HhCCC--CCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022 136 ---TNAL-ILK------EFAPS--IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (332)
Q Consensus 136 ---~~~~-~~~------~~~~~--~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg 189 (332)
-+.. .+. +.... ..+...++.+.+....+....++..|++..-++...|+|.+.
T Consensus 198 ~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 198 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred CCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 0000 000 00000 122347889999888888888899999988888888889754
No 83
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.41 E-value=2.1e-06 Score=83.83 Aligned_cols=168 Identities=20% Similarity=0.177 Sum_probs=109.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-----CCccceEeeCChhhhc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-----PLLKGVVATTDAVEAC 79 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-----~~~~~~~~~~~~~~al 79 (332)
.++|.|+||+|++|+.+...++..+. -+|.++|.+| -++.....++.+... +....++-......++
T Consensus 250 gK~vLVTGagGSiGsel~~qil~~~p------~~i~l~~~~E--~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~ 321 (588)
T COG1086 250 GKTVLVTGGGGSIGSELCRQILKFNP------KEIILFSRDE--YKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAM 321 (588)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhcCC------CEEEEecCch--HHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHH
Confidence 47899999999999999999987642 2899999986 344444555554311 1112333333456788
Q ss_pred CC--CcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec----CcccchHHHHHHhCCCCCCC
Q 020022 80 TG--VNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA----NPANTNALILKEFAPSIPAK 151 (332)
Q Consensus 80 ~~--aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t----NP~~~~~~~~~~~~~~~~~~ 151 (332)
++ .|+|+|+|....-|- ....+-...|+--.+++++...+++-+ ..|.+.| ||.+
T Consensus 322 ~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~-~~V~iSTDKAV~PtN---------------- 384 (588)
T COG1086 322 EGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVK-KFVLISTDKAVNPTN---------------- 384 (588)
T ss_pred hcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCC-EEEEEecCcccCCch----------------
Confidence 88 999999998766554 456778899999999999999998864 4444444 4444
Q ss_pred cEEEechHHHHHHHHHHHHHcC---CCCCCeeeeEEEeccCCceeecCCce
Q 020022 152 NITCLTRLDHNRALGQISEKLN---VQVSDVKNVIIWGNHSSSQYPDVNHA 199 (332)
Q Consensus 152 ~i~~~t~lds~r~~~~la~~l~---v~~~~v~~~~v~G~hg~~~v~~~S~~ 199 (332)
+.|.|+.-+..+-...++..+ ....-|+.-+|+|.- .|.+|+|.+-
T Consensus 385 -vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-GSViPlFk~Q 433 (588)
T COG1086 385 -VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-GSVIPLFKKQ 433 (588)
T ss_pred -HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-CCCHHHHHHH
Confidence 335455444444444433222 223344555566653 3778887543
No 84
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.38 E-value=4.8e-06 Score=82.53 Aligned_cols=107 Identities=15% Similarity=0.173 Sum_probs=71.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHH-------hhh---hcCCccceEeeCCh
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL-------VDA---AFPLLKGVVATTDA 75 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl-------~~~---~~~~~~~~~~~~~~ 75 (332)
+||+||| +|.||+.++..|+..|. +|+++|+++ +.++.....+ ... ......+++.+++.
T Consensus 5 ~kIavIG-~G~MG~~iA~~la~~G~-------~V~v~D~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~ 74 (495)
T PRK07531 5 MKAACIG-GGVIGGGWAARFLLAGI-------DVAVFDPHP--EAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASL 74 (495)
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCC-------eEEEEeCCH--HHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCH
Confidence 5899999 79999999999998774 799999985 3332211100 000 00011236677778
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~ 138 (332)
.+++++||+||.+. ..+.++.+.+...+.++++|++ |+.||.+.+..
T Consensus 75 ~ea~~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~--iI~SsTsgi~~ 121 (495)
T PRK07531 75 AEAVAGADWIQESV--------------PERLDLKRRVLAEIDAAARPDA--LIGSSTSGFLP 121 (495)
T ss_pred HHHhcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCH
Confidence 88999999999873 2345666677777888887664 45677666433
No 85
>PLN02214 cinnamoyl-CoA reductase
Probab=98.38 E-value=5.5e-06 Score=78.23 Aligned_cols=170 Identities=15% Similarity=0.103 Sum_probs=103.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhh--c-CCccceEeeCChhhhcC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAA--F-PLLKGVVATTDAVEACT 80 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~--~-~~~~~~~~~~~~~~al~ 80 (332)
.++|.|+||+|++|++++..|+..|. +|+.++++.+ ... .....+.... . ....++....+..++++
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 80 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGY-------TVKGTVRNPD--DPKNTHLRELEGGKERLILCKADLQDYEALKAAID 80 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC-------EEEEEeCCch--hhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh
Confidence 46899999999999999999998763 6888877632 111 1111111100 0 00012222224567788
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH-------HHHHHhCC-C--CC-
Q 020022 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA-------LILKEFAP-S--IP- 149 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~-------~~~~~~~~-~--~~- 149 (332)
++|+||++|+... ....+.+..|+.....+.+.+.+... .++|++|.-..+-. ..+.+-.. . .+
T Consensus 81 ~~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v--~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~ 155 (342)
T PLN02214 81 GCDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKV--KRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCK 155 (342)
T ss_pred cCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCC--CEEEEeccceeeeccCCCCCCcccCcccCCChhhcc
Confidence 9999999998642 23466788899999999999988653 24655554211100 00000000 0 01
Q ss_pred -CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 150 -AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 150 -~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
+...++.++....++...+++..+++..-++...|+|.+
T Consensus 156 ~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~ 195 (342)
T PLN02214 156 NTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPP 195 (342)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence 112456677777777777778889888888888888864
No 86
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.38 E-value=3.6e-06 Score=78.33 Aligned_cols=174 Identities=15% Similarity=0.085 Sum_probs=99.7
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh--cC----CccceEeeCChh
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--FP----LLKGVVATTDAV 76 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~--~~----~~~~~~~~~~~~ 76 (332)
.+.+||.|+||+|++|++++..|+..|. +|++++++.. ... ....+.... .+ ...++.-.....
T Consensus 2 ~~~~~ilVtGatGfIG~~l~~~L~~~g~-------~V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 71 (322)
T PLN02662 2 GEGKVVCVTGASGYIASWLVKLLLQRGY-------TVKATVRDPN--DPK-KTEHLLALDGAKERLHLFKANLLEEGSFD 71 (322)
T ss_pred CCCCEEEEECChHHHHHHHHHHHHHCCC-------EEEEEEcCCC--chh-hHHHHHhccCCCCceEEEeccccCcchHH
Confidence 3457999999999999999999998763 6777776642 111 111111100 00 001222223356
Q ss_pred hhcCCCcEEEEeCCCCCCCCCC-HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH---------HHHhCC
Q 020022 77 EACTGVNIAVMVGGFPRKEGME-RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI---------LKEFAP 146 (332)
Q Consensus 77 ~al~~aDiVi~~ag~~~~~~~~-r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~---------~~~~~~ 146 (332)
++++++|+|||+|+........ ..+.+..|+....++.+.+.+.... .++|++|.-.. ..|- +.+-.+
T Consensus 72 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~-~~~v~~SS~~~-~~y~~~~~~~~~~~~E~~~ 149 (322)
T PLN02662 72 SVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSV-KRVVVTSSMAA-VAYNGKPLTPDVVVDETWF 149 (322)
T ss_pred HHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEccCHHH-hcCCCcCCCCCCcCCcccC
Confidence 7788999999999864322122 2367788999999999988776212 24655553111 0010 000000
Q ss_pred CCCC-----CcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 147 SIPA-----KNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 147 ~~~~-----~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
.-|. ...++.+.....++...+++..+++..-++...++|..
T Consensus 150 ~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~ 196 (322)
T PLN02662 150 SDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPL 196 (322)
T ss_pred CChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCC
Confidence 0010 11355666666666666677778887777766667753
No 87
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.38 E-value=2.1e-06 Score=88.19 Aligned_cols=169 Identities=14% Similarity=0.122 Sum_probs=104.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCC-hhhhcC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTD-AVEACT 80 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~-~~~al~ 80 (332)
+.|||.|+||+||+|++++..|+.. +. +|+.+|+... ... .. +.+..... ..++.-... ..++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-------~V~~l~r~~~--~~~-~~--~~~~~~~~~~gDl~d~~~~l~~~l~ 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNY-------EVYGLDIGSD--AIS-RF--LGHPRFHFVEGDISIHSEWIEYHIK 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCc-------EEEEEeCCch--hhh-hh--cCCCceEEEeccccCcHHHHHHHhc
Confidence 3579999999999999999999874 32 7888997641 111 00 00000000 011111111 245688
Q ss_pred CCcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCC---CC--
Q 020022 81 GVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPS---IP-- 149 (332)
Q Consensus 81 ~aDiVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~---~~-- 149 (332)
++|+|||+|+.... ...+..+.+..|+....++.+.++++. + ++|++|.. .+... ...+-.+- .|
T Consensus 382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~--~~V~~SS~-~vyg~~~~~~~~E~~~~~~~~p~~ 457 (660)
T PRK08125 382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K--RIIFPSTS-EVYGMCTDKYFDEDTSNLIVGPIN 457 (660)
T ss_pred CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C--eEEEEcch-hhcCCCCCCCcCccccccccCCCC
Confidence 99999999886432 223456677889999999999999875 3 45555542 11000 00000000 01
Q ss_pred -CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 150 -AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 150 -~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
+...++.+.....++...+++..+++...++...|+|..
T Consensus 458 ~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 458 KQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR 497 (660)
T ss_pred CCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence 123678888888888888888889998888988888864
No 88
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.35 E-value=5.2e-06 Score=78.63 Aligned_cols=175 Identities=13% Similarity=0.088 Sum_probs=98.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cC-CccceEeeCChhhhcCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACTGV 82 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~-~~~~~~~~~~~~~al~~a 82 (332)
.|||.|+||+|++|++++..|+..|. +|++.+++. +.......++.... .. ...++.......++++++
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGY-------TVHATLRDP--AKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGC 80 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCC
Confidence 47999999999999999999998763 677777653 22211111111100 00 001111111234667889
Q ss_pred cEEEEeCCCCCCC---C-CCHHHHH-----HhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH--------HHHHHhC
Q 020022 83 NIAVMVGGFPRKE---G-MERKDVM-----SKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA--------LILKEFA 145 (332)
Q Consensus 83 DiVi~~ag~~~~~---~-~~r~~~~-----~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~--------~~~~~~~ 145 (332)
|+||++|+..... . .+..+.+ ..|+.....+.+.+.++. .-.++|++|.-.-... ..+.+..
T Consensus 81 d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~ 159 (353)
T PLN02896 81 DGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKDSNGRWRAVVDETC 159 (353)
T ss_pred CEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccccCCCCCCccCccc
Confidence 9999999864321 1 1222333 334577788888877653 1235666554211000 0000000
Q ss_pred CC--------CCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022 146 PS--------IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (332)
Q Consensus 146 ~~--------~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg 189 (332)
.. .++...++.+++...++...+++..+++..-++...|+|.+-
T Consensus 160 ~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~ 211 (353)
T PLN02896 160 QTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFL 211 (353)
T ss_pred CCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCc
Confidence 00 011125788888888888888888898888888777788643
No 89
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.34 E-value=3.2e-06 Score=79.87 Aligned_cols=166 Identities=10% Similarity=0.069 Sum_probs=97.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcCC-ccceE-eeCChhhhcCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFPL-LKGVV-ATTDAVEACTG 81 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~~-~~~~~-~~~~~~~al~~ 81 (332)
|||+|+||+|++|++++..|+.. +. +|+.+|+.. +... ++... .... ..++. ......+++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~-------~V~~~~r~~--~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 68 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDW-------EVYGMDMQT--DRLG----DLVNHPRMHFFEGDITINKEWIEYHVKK 68 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCC-------eEEEEeCcH--HHHH----HhccCCCeEEEeCCCCCCHHHHHHHHcC
Confidence 58999999999999999999874 32 789998753 1111 11100 0000 01111 00123356789
Q ss_pred CcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCC------C
Q 020022 82 VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSI------P 149 (332)
Q Consensus 82 aDiVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~------~ 149 (332)
+|+|||+|+.... ...+.......|+...+++++.+++.. .++|.+|... +.-. ...+-.+-+ +
T Consensus 69 ~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~---~~~v~~SS~~-vyg~~~~~~~~ee~~~~~~~~~~~ 144 (347)
T PRK11908 69 CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSE-VYGMCPDEEFDPEASPLVYGPINK 144 (347)
T ss_pred CCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC---CeEEEEecce-eeccCCCcCcCccccccccCcCCC
Confidence 9999999876422 223445566778888899999888753 3566665431 1000 000000000 1
Q ss_pred CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
+...++.+..........+++..+++..-++...++|.+
T Consensus 145 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~ 183 (347)
T PRK11908 145 PRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPG 183 (347)
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCC
Confidence 112466677777667666777789988888877778853
No 90
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.34 E-value=5.7e-06 Score=77.21 Aligned_cols=175 Identities=12% Similarity=0.077 Sum_probs=100.7
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-C----CccceEeeCC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-P----LLKGVVATTD 74 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~----~~~~~~~~~~ 74 (332)
|....++|.|+||+|++|++++..|+..|. +|++..++.. ... ....+.... . . ...++.-...
T Consensus 1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 70 (322)
T PLN02986 1 MNGGGKLVCVTGASGYIASWIVKLLLLRGY-------TVKATVRDLT--DRK-KTEHLLALDGAKERLKLFKADLLEESS 70 (322)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCCc--chH-HHHHHHhccCCCCceEEEecCCCCcch
Confidence 655668999999999999999999998763 6765544421 111 111111100 0 0 0011212223
Q ss_pred hhhhcCCCcEEEEeCCCCCCC-CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC------
Q 020022 75 AVEACTGVNIAVMVGGFPRKE-GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS------ 147 (332)
Q Consensus 75 ~~~al~~aDiVi~~ag~~~~~-~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~------ 147 (332)
..++++++|+||++|+..... .....+++..|+.....+.+.+.+.. .-.+||++|.-.... +.-.....+
T Consensus 71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~v~rvV~~SS~~~~~-~~~~~~~~~~~~~E~ 148 (322)
T PLN02986 71 FEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETP-SVKRVILTSSTAAVL-FRQPPIEANDVVDET 148 (322)
T ss_pred HHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcC-CccEEEEecchhhee-cCCccCCCCCCcCcc
Confidence 556788999999999864211 11223467789999999998887652 112465555322110 000000000
Q ss_pred -C--C-----CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022 148 -I--P-----AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (332)
Q Consensus 148 -~--~-----~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~ 187 (332)
+ | +...++.++....++.+.+++..+++...++...|+|.
T Consensus 149 ~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp 196 (322)
T PLN02986 149 FFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGP 196 (322)
T ss_pred cCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCC
Confidence 0 1 12346777777777777777777888777777777775
No 91
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.30 E-value=9.6e-06 Score=71.72 Aligned_cols=103 Identities=14% Similarity=0.122 Sum_probs=63.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhhcCCCc
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~al~~aD 83 (332)
|||+||||+|.+|++++..|+..+. +|.++++++ ++++....++.+... ....++.. ++..++++++|
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~-------~V~v~~r~~--~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aD 70 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN-------KIIIGSRDL--EKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRAD 70 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-------EEEEEEcCH--HHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCC
Confidence 5899998579999999999998762 789999874 444433333322111 11112222 35578899999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~ 135 (332)
+||++.-. ..+.++++.+.... ++..||-++||.+
T Consensus 71 vVilavp~----------------~~~~~~l~~l~~~l-~~~vvI~~~ngi~ 105 (219)
T TIGR01915 71 VVILAVPW----------------DHVLKTLESLRDEL-SGKLVISPVVPLA 105 (219)
T ss_pred EEEEECCH----------------HHHHHHHHHHHHhc-cCCEEEEeccCce
Confidence 99998521 11223334444333 2356777899975
No 92
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.27 E-value=5e-06 Score=77.58 Aligned_cols=109 Identities=12% Similarity=0.049 Sum_probs=69.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhcCCCcE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al~~aDi 84 (332)
|||+|+||+|++|++++..|+..|. +|+.++++. +... .+.+.... ...++.-...+.++++++|+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~-------~V~~l~R~~--~~~~----~l~~~~v~~v~~Dl~d~~~l~~al~g~d~ 67 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY-------QVRCLVRNL--RKAS----FLKEWGAELVYGDLSLPETLPPSFKGVTA 67 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcCh--HHhh----hHhhcCCEEEECCCCCHHHHHHHHCCCCE
Confidence 4899999999999999999998763 788888763 2111 11111000 00111112245788999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
||++++.... +.......|....+++++.+++.+.+ ++|.+|.
T Consensus 68 Vi~~~~~~~~---~~~~~~~~~~~~~~~l~~aa~~~gvk--r~I~~Ss 110 (317)
T CHL00194 68 IIDASTSRPS---DLYNAKQIDWDGKLALIEAAKAAKIK--RFIFFSI 110 (317)
T ss_pred EEECCCCCCC---CccchhhhhHHHHHHHHHHHHHcCCC--EEEEecc
Confidence 9998764321 12234567888888999988887643 5666553
No 93
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.26 E-value=3.8e-06 Score=79.18 Aligned_cols=163 Identities=10% Similarity=-0.009 Sum_probs=90.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCch---hhhhhhHHHHhh---hhcCC-ccceEeeCChhhh
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA---EALNGVKMELVD---AAFPL-LKGVVATTDAVEA 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~---~~l~~~~~dl~~---~~~~~-~~~~~~~~~~~~a 78 (332)
+||.|+||+|++|++++..|+..|. +|+++|++... +.+.....+... ..... ..+++......++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~ 73 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY-------EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRI 73 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC-------EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHH
Confidence 4899999999999999999998763 78999876421 111100000000 00000 0111111123455
Q ss_pred cCC--CcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCC-CeEEEEecCcccchH---H-HHHHhCCCCC
Q 020022 79 CTG--VNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAP-NCKVLVVANPANTNA---L-ILKEFAPSIP 149 (332)
Q Consensus 79 l~~--aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~-~~~viv~tNP~~~~~---~-~~~~~~~~~~ 149 (332)
+++ .|+|||+|+...... ......+..|+.....+.+.+.+++.+ ..+++++|.. .+-- . ...+- ..+.
T Consensus 74 ~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~-~vyg~~~~~~~~E~-~~~~ 151 (343)
T TIGR01472 74 IDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTS-ELYGKVQEIPQNET-TPFY 151 (343)
T ss_pred HHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccH-HhhCCCCCCCCCCC-CCCC
Confidence 664 599999998653221 123344566877888888888876422 2245555431 1100 0 00010 1123
Q ss_pred CCcEEEechHHHHHHHHHHHHHcCCCCC
Q 020022 150 AKNITCLTRLDHNRALGQISEKLNVQVS 177 (332)
Q Consensus 150 ~~~i~~~t~lds~r~~~~la~~l~v~~~ 177 (332)
+...++.++....++...+++..+++..
T Consensus 152 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 179 (343)
T TIGR01472 152 PRSPYAAAKLYAHWITVNYREAYGLFAV 179 (343)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCceE
Confidence 3446788888888888888888777543
No 94
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.26 E-value=7.9e-06 Score=76.01 Aligned_cols=167 Identities=17% Similarity=0.124 Sum_probs=96.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCCcE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~aDi 84 (332)
|||.|+||+|++|++++..|+..+. +++++|+++. ... ++.+... ....++.-..+..++++++|+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~----~~~~~~~~~~~~D~~~~~~l~~~~~~~d~ 67 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE-------EVRVLVRPTS--DRR----NLEGLDVEIVEGDLRDPASLRKAVAGCRA 67 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC-------EEEEEEecCc--ccc----ccccCCceEEEeeCCCHHHHHHHHhCCCE
Confidence 4899999999999999999998763 7899998642 111 1111000 000011111235567889999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH--H--HHHHhCCCCCCC--cEEEech
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA--L--ILKEFAPSIPAK--NITCLTR 158 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~--~--~~~~~~~~~~~~--~i~~~t~ 158 (332)
||++++.......+.......|+.....+++.+.+... .++|+.|.....-. . ...+..+..+.. ..++.+.
T Consensus 68 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK 145 (328)
T TIGR03466 68 LFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGV--ERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSK 145 (328)
T ss_pred EEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHH
Confidence 99998754333345567788899999999998887653 24666654221000 0 000000000111 1234455
Q ss_pred HHHHHHHHHHHHHcCCCCCCeeeeEEEec
Q 020022 159 LDHNRALGQISEKLNVQVSDVKNVIIWGN 187 (332)
Q Consensus 159 lds~r~~~~la~~l~v~~~~v~~~~v~G~ 187 (332)
....++...+++..+++..-++...++|.
T Consensus 146 ~~~e~~~~~~~~~~~~~~~ilR~~~~~G~ 174 (328)
T TIGR03466 146 FLAEQAALEMAAEKGLPVVIVNPSTPIGP 174 (328)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCC
Confidence 55566666666666777766666556674
No 95
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=98.25 E-value=1.6e-05 Score=78.08 Aligned_cols=124 Identities=16% Similarity=0.189 Sum_probs=78.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH--------HHhhhhcC-CccceEeeCCh
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM--------ELVDAAFP-LLKGVVATTDA 75 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~--------dl~~~~~~-~~~~~~~~~~~ 75 (332)
+|||+|+| +|.||..++..|+..|. + .++..+|+++ ++.+.... .+.+.... ...+++.+++.
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~-g----~~V~gvD~~~--~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~ 72 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCP-D----IEVVVVDISV--PRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDV 72 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCC-C----CeEEEEECCH--HHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCH
Confidence 36899999 79999999999998642 1 1799999985 44432111 11111000 12357888888
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccch
Q 020022 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTN 137 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~~ 137 (332)
.+++++||++|++.+.|...+....+ -.-++..+.+.++.|.++..++.+|++- |-|....
T Consensus 73 ~~~i~~advi~I~V~TP~~~~g~~~~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt 134 (473)
T PLN02353 73 EKHVAEADIVFVSVNTPTKTRGLGAG-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTA 134 (473)
T ss_pred HHHHhcCCEEEEEeCCCCCCCCCcCC-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChH
Confidence 88999999999999998753210000 0224455667777777776555444443 5677654
No 96
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.23 E-value=1.1e-05 Score=74.83 Aligned_cols=162 Identities=17% Similarity=0.199 Sum_probs=94.5
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh-hHHHHhhhhcCCccceEeeCC-hhhhc-----C
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-VKMELVDAAFPLLKGVVATTD-AVEAC-----T 80 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~-~~~dl~~~~~~~~~~~~~~~~-~~~al-----~ 80 (332)
|.|+||+|++|++++..|+..|. . .+.++|.......... ...|+.+.. ...+ ..+++ .
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~-~-----~v~~~~~~~~~~~~~~~~~~~~~d~~--------~~~~~~~~~~~~~~~~ 67 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI-T-----DILVVDNLKDGTKFVNLVDLDIADYM--------DKEDFLAQIMAGDDFG 67 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC-c-----eEEEecCCCcchHHHhhhhhhhhhhh--------hHHHHHHHHhcccccC
Confidence 88999999999999999998763 1 4777886531110000 112222111 0001 12222 3
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcEEEe
Q 020022 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCL 156 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i~~~ 156 (332)
++|+|||+|+.+.....+....+..|+....++.+.+.+.. +++|+.|... +... ...+. ....+...++.
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~---~~~i~~SS~~-vyg~~~~~~~~E~-~~~~p~~~Y~~ 142 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE---IPFLYASSAA-TYGGRTDDFIEER-EYEKPLNVYGY 142 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC---CcEEEEcchH-HhCcCCCCCCccC-CCCCCCCHHHH
Confidence 79999999986543333445577889999999999988764 3455555321 1000 00000 00112234666
Q ss_pred chHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
+.....++...+++..+++...++...|+|..
T Consensus 143 sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~ 174 (308)
T PRK11150 143 SKFLFDEYVRQILPEANSQICGFRYFNVYGPR 174 (308)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeeeecCCC
Confidence 77766666666666668877788877778864
No 97
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.22 E-value=8.7e-06 Score=76.99 Aligned_cols=172 Identities=13% Similarity=0.106 Sum_probs=101.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh----cCC-ccceEeeCChhhhcC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----FPL-LKGVVATTDAVEACT 80 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~----~~~-~~~~~~~~~~~~al~ 80 (332)
+||.|+||+|++|++++..|+..|. . .+.++|..+..... ..+.+.. ... ..++.-..+..++++
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~-~-----~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 71 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETS-D-----AVVVVDKLTYAGNL----MSLAPVAQSERFAFEKVDICDRAELARVFT 71 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCC-C-----EEEEEecCccccch----hhhhhcccCCceEEEECCCcChHHHHHHHh
Confidence 5899999999999999999998763 1 46677754211111 1111100 000 011111122344555
Q ss_pred --CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhc------CCC-eEEEEecCcccchHH------HHHH
Q 020022 81 --GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHA------APN-CKVLVVANPANTNAL------ILKE 143 (332)
Q Consensus 81 --~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~------~~~-~~viv~tNP~~~~~~------~~~~ 143 (332)
++|+||++||..... .....+.+..|+.....+++.+.+++ .+. .+++.+|... +... .+.+
T Consensus 72 ~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~E 150 (355)
T PRK10217 72 EHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE-VYGDLHSTDDFFTE 150 (355)
T ss_pred hcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh-hcCCCCCCCCCcCC
Confidence 489999999865321 12345677889999999999887641 111 2455555421 1000 0001
Q ss_pred hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg 189 (332)
. ....+...++.+.....++...+++..+++..-++...|+|.+.
T Consensus 151 ~-~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 151 T-TPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred C-CCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 0 01122345788888888888888888899888888777888643
No 98
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.21 E-value=1.4e-05 Score=73.88 Aligned_cols=174 Identities=14% Similarity=0.072 Sum_probs=98.6
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cC-CccceEeeCChhhhcCC--C
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACTG--V 82 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~-~~~~~~~~~~~~~al~~--a 82 (332)
||.|+||+|++|++++..|+..+- ..++.++|+........ ...++.... .. ....+.-..+..+++++ +
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~-----~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 74 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHP-----DAEVIVLDKLTYAGNLE-NLADLEDNPRYRFVKGDIGDRELVSRLFTEHQP 74 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCC-----CCEEEEecCCCcchhhh-hhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCC
Confidence 589999999999999999987541 11678887642111110 111111100 00 00111111234456666 8
Q ss_pred cEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc--chH--HHHHHhCCCCCCCcEEEe
Q 020022 83 NIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN--TNA--LILKEFAPSIPAKNITCL 156 (332)
Q Consensus 83 DiVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~--~~~--~~~~~~~~~~~~~~i~~~ 156 (332)
|+||++|+.... ........+..|+.....+++.+.+... +.+++.+|...- ... ....+. ....+...++.
T Consensus 75 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~v~g~~~~~~~~~e~-~~~~~~~~Y~~ 152 (317)
T TIGR01181 75 DAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWH-EFRFHHISTDEVYGDLEKGDAFTET-TPLAPSSPYSA 152 (317)
T ss_pred CEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeccceeCCCCCCCCcCCC-CCCCCCCchHH
Confidence 999999986431 1223456678899999999998887642 346666653210 000 000010 11222335666
Q ss_pred chHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 157 TRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 157 t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
+.....++...+++..+++..-++...++|..
T Consensus 153 sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~ 184 (317)
T TIGR01181 153 SKAASDHLVRAYHRTYGLPALITRCSNNYGPY 184 (317)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 77777777777777888887777777677753
No 99
>PLN02778 3,5-epimerase/4-reductase
Probab=98.20 E-value=2.1e-05 Score=72.87 Aligned_cols=89 Identities=13% Similarity=0.126 Sum_probs=60.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.|||.|+||+||+|++++..|+..|. ++++...+. ........++. + .++|+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-------~V~~~~~~~--~~~~~v~~~l~-----------------~--~~~D~ 60 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI-------DFHYGSGRL--ENRASLEADID-----------------A--VKPTH 60 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC-------EEEEecCcc--CCHHHHHHHHH-----------------h--cCCCE
Confidence 48999999999999999999988763 565443221 00111111111 1 26899
Q ss_pred EEEeCCCCCCCC-----CCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022 85 AVMVGGFPRKEG-----MERKDVMSKNVSIYKAQASALEQHA 121 (332)
Q Consensus 85 Vi~~ag~~~~~~-----~~r~~~~~~n~~i~~~i~~~i~~~~ 121 (332)
|||+|+....+. ....+.+..|+....++++.+++..
T Consensus 61 ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g 102 (298)
T PLN02778 61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG 102 (298)
T ss_pred EEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999998754322 2456778899999999999998875
No 100
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.19 E-value=8.9e-06 Score=76.83 Aligned_cols=174 Identities=11% Similarity=0.073 Sum_probs=100.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cC-CccceEeeCChhhhcC--C
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEACT--G 81 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~-~~~~~~~~~~~~~al~--~ 81 (332)
|||.|+||+|++|++++..|+..|. . .+..+|......... ....+.... .. ...++.-..+..++++ +
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~-~-----~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 73 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ-D-----SVVNVDKLTYAGNLE-SLADVSDSERYVFEHADICDRAELDRIFAQHQ 73 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC-C-----eEEEecCCCccchHH-HHHhcccCCceEEEEecCCCHHHHHHHHHhcC
Confidence 4899999999999999999998753 1 355666532101111 000110000 00 0011111112344554 4
Q ss_pred CcEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhc-------CCCeEEEEecCcccchHH-------------
Q 020022 82 VNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHA-------APNCKVLVVANPANTNAL------------- 139 (332)
Q Consensus 82 aDiVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~-------~~~~~viv~tNP~~~~~~------------- 139 (332)
+|+||++|+.... ......+.+..|+.....+++.+.++. ....++|.+|... +...
T Consensus 74 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~ 152 (352)
T PRK10084 74 PDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSEEL 152 (352)
T ss_pred CCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccccC
Confidence 7999999986532 122345678999999999999988751 0112455555321 1100
Q ss_pred -HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 140 -ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 140 -~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
.+.+- ..+.+...++.++....++...+++..+++...++...|+|.+
T Consensus 153 ~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~ 201 (352)
T PRK10084 153 PLFTET-TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPY 201 (352)
T ss_pred CCcccc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCC
Confidence 00000 0122334678888888888887888889887777877778865
No 101
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.18 E-value=6.5e-06 Score=76.25 Aligned_cols=156 Identities=16% Similarity=0.138 Sum_probs=88.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--CCc
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN 83 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~aD 83 (332)
|||.|+||+||+|++++..|+..+ +++.+|+.. .. ...|+.+.. ...++++ ++|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g--------~V~~~~~~~--~~---~~~Dl~d~~-----------~~~~~~~~~~~D 56 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG--------NLIALDVHS--TD---YCGDFSNPE-----------GVAETVRKIRPD 56 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC--------CEEEecccc--cc---ccCCCCCHH-----------HHHHHHHhcCCC
Confidence 489999999999999999988754 366777642 11 112333221 2334455 589
Q ss_pred EEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH---HH-HHHhCCCCCCCcEEEec
Q 020022 84 IAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA---LI-LKEFAPSIPAKNITCLT 157 (332)
Q Consensus 84 iVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~---~~-~~~~~~~~~~~~i~~~t 157 (332)
+|||+|+..... ..........|+....++++.+++.. .++|.+|... +.. .. ..+- .-..|...++.+
T Consensus 57 ~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g---~~~v~~Ss~~-Vy~~~~~~p~~E~-~~~~P~~~Yg~s 131 (299)
T PRK09987 57 VIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG---AWVVHYSTDY-VFPGTGDIPWQET-DATAPLNVYGET 131 (299)
T ss_pred EEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEccce-EECCCCCCCcCCC-CCCCCCCHHHHH
Confidence 999999865321 12334455789999999999998864 3566655421 100 00 0000 001222346666
Q ss_pred hHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceee
Q 020022 158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP 194 (332)
Q Consensus 158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~ 194 (332)
++...++... +..+..-++...|+|..+...++
T Consensus 132 K~~~E~~~~~----~~~~~~ilR~~~vyGp~~~~~~~ 164 (299)
T PRK09987 132 KLAGEKALQE----HCAKHLIFRTSWVYAGKGNNFAK 164 (299)
T ss_pred HHHHHHHHHH----hCCCEEEEecceecCCCCCCHHH
Confidence 6665444322 22233445655667765444443
No 102
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.18 E-value=1.5e-05 Score=74.28 Aligned_cols=104 Identities=20% Similarity=0.286 Sum_probs=66.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH----HH---Hhhhhc-------CCccceEe
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK----ME---LVDAAF-------PLLKGVVA 71 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~----~d---l~~~~~-------~~~~~~~~ 71 (332)
+||+||| +|.+|+.++..|+..|. +|+++|+++ +.++... .. +.+... ....+++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~-------~V~v~d~~~--~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~ 72 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGH-------EVRLWDADP--AAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV 72 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCC-------eeEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE
Confidence 5899999 79999999999998764 799999984 3232110 00 111100 01234567
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (332)
Q Consensus 72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~ 135 (332)
+++..+++++||+|+.+. ..+....+.+...+.+.+++++ + +.||...
T Consensus 73 ~~~~~~a~~~ad~Vi~av--------------pe~~~~k~~~~~~l~~~~~~~~-i-i~ssts~ 120 (308)
T PRK06129 73 TDSLADAVADADYVQESA--------------PENLELKRALFAELDALAPPHA-I-LASSTSA 120 (308)
T ss_pred ECcHHHhhCCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCcc-e-EEEeCCC
Confidence 778888899999999884 1223445556666777775553 3 3565444
No 103
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=98.17 E-value=3.5e-05 Score=74.68 Aligned_cols=111 Identities=23% Similarity=0.322 Sum_probs=70.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--------------ccceEe
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------LKGVVA 71 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--------------~~~~~~ 71 (332)
|||+||| .|.||..++..|+..|. +|.++|+++ ++.+. +.....+. ..+++.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~-------~V~~~d~~~--~~v~~----l~~g~~~~~e~~l~~~~~~~~~~g~l~~ 66 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGH-------EVTGVDIDQ--EKVDK----LNKGKSPIYEPGLDELLAKALAAGRLRA 66 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCC-------eEEEEECCH--HHHHH----hhcCCCCCCCCCHHHHHHHhhhcCCeEE
Confidence 4899999 79999999999998763 799999984 33321 22211100 123566
Q ss_pred eCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-Ccccc
Q 020022 72 TTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANT 136 (332)
Q Consensus 72 ~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~ 136 (332)
+++..+++++||+||++.+.+.....+ -+...+....+.+.++..++.++++.| -|...
T Consensus 67 ~~~~~~~~~~advvii~vpt~~~~~~~------~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt 126 (411)
T TIGR03026 67 TTDYEDAIRDADVIIICVPTPLKEDGS------PDLSYVESAAETIAKHLRKGATVVLESTVPPGT 126 (411)
T ss_pred ECCHHHHHhhCCEEEEEeCCCCCCCCC------cChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCc
Confidence 677778899999999998877543221 133444555555655544555555544 34443
No 104
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.17 E-value=2.4e-05 Score=80.52 Aligned_cols=173 Identities=14% Similarity=0.109 Sum_probs=101.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC------hh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD------AV 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~------~~ 76 (332)
+++||.|+||+||+|++++..|+..+. + .+|+.+|.......+. .+.... ...++.. ..| ..
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~-~----~~V~~~d~~~~~~~~~----~l~~~~--~~~~v~~~~~Dl~d~~~~~ 73 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYP-D----YKIVVLDKLDYCSNLK----NLNPSK--SSPNFKFVKGDIASADLVN 73 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCC-C----CEEEEEeCCCccchhh----hhhhcc--cCCCeEEEECCCCChHHHH
Confidence 578999999999999999999987631 1 1788888642111111 110000 0011111 111 11
Q ss_pred hhc--CCCcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH------HhCC
Q 020022 77 EAC--TGVNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK------EFAP 146 (332)
Q Consensus 77 ~al--~~aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~------~~~~ 146 (332)
..+ .++|+||++|+...... ....++...|+...+.+.+.+++.+ +-.++|.+|.- .+....-. ....
T Consensus 74 ~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~-~vyg~~~~~~~~~~~E~~ 151 (668)
T PLN02260 74 YLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTD-EVYGETDEDADVGNHEAS 151 (668)
T ss_pred HHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcch-HHhCCCccccccCccccC
Confidence 222 68999999998753221 2334667889999999999988875 22356666641 11000000 0000
Q ss_pred CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (332)
Q Consensus 147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg 189 (332)
...+...++.++....++....++..+++..-++...|+|.+.
T Consensus 152 ~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 152 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 1112335677888888887777777888877778777788654
No 105
>PRK09135 pteridine reductase; Provisional
Probab=98.14 E-value=4e-05 Score=68.26 Aligned_cols=153 Identities=11% Similarity=0.082 Sum_probs=82.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc----cceEeeCChhhhc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL----KGVVATTDAVEAC 79 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~----~~~~~~~~~~~al 79 (332)
+.++|.|+||+|++|++++..|+..|. ++.++++.. ++.+.....++.+...... .++........++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 76 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-------RVAIHYHRS-AAEADALAAELNALRPGSAAALQADLLDPDALPELV 76 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC-HHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHH
Confidence 447899999999999999999998764 788888753 2233322233332210000 0111111112222
Q ss_pred -------CCCcEEEEeCCCCCCC---CC---CHHHHHHhhHHHHHHHHHHHHhhcC-CCeEEEEecCcccchHHHHHHhC
Q 020022 80 -------TGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 80 -------~~aDiVi~~ag~~~~~---~~---~r~~~~~~n~~i~~~i~~~i~~~~~-~~~~viv~tNP~~~~~~~~~~~~ 145 (332)
...|+||+++|..... .. +..+.+..|+.....+.+.+.++-. ....++..+. . ...
T Consensus 77 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~-~-------~~~- 147 (249)
T PRK09135 77 AACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD-I-------HAE- 147 (249)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC-h-------hhc-
Confidence 3579999999863211 11 2344566787766666666544311 1234444332 1 011
Q ss_pred CCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 146 ~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
...++...++.++.....+...+++.++
T Consensus 148 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~ 175 (249)
T PRK09135 148 RPLKGYPVYCAAKAALEMLTRSLALELA 175 (249)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHC
Confidence 1233334566677666666667777664
No 106
>PLN02240 UDP-glucose 4-epimerase
Probab=98.14 E-value=1.5e-05 Score=75.18 Aligned_cols=175 Identities=15% Similarity=0.056 Sum_probs=93.6
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc---CCc----cceEeeC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF---PLL----KGVVATT 73 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~---~~~----~~~~~~~ 73 (332)
|+++.+||.|+||+|++|++++..|+..+. +|+++|+... ........+.+... ... .++.-..
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 71 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGY-------KVVVIDNLDN--SSEEALRRVKELAGDLGDNLVFHKVDLRDKE 71 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCCc--chHHHHHHHHHhhcccCccceEEecCcCCHH
Confidence 777788999999999999999999998763 7888886421 00000011111100 000 0111111
Q ss_pred ChhhhcC--CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhC
Q 020022 74 DAVEACT--GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFA 145 (332)
Q Consensus 74 ~~~~al~--~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~ 145 (332)
+..++++ ++|+||++|+..... .......+..|+.....+++.+.+... ..++++|. ..+... .+.+-
T Consensus 72 ~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss-~~vyg~~~~~~~~E~- 147 (352)
T PLN02240 72 ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGC--KKLVFSSS-ATVYGQPEEVPCTEE- 147 (352)
T ss_pred HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEEcc-HHHhCCCCCCCCCCC-
Confidence 2233343 689999999864311 124456788999999999998877642 24666654 221000 00000
Q ss_pred CCCCCCcEEEechHHHHHHHHHHHHH-cCCCCCCeeeeEEEecc
Q 020022 146 PSIPAKNITCLTRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 146 ~~~~~~~i~~~t~lds~r~~~~la~~-l~v~~~~v~~~~v~G~h 188 (332)
..+.+...++.+.....++...+++. .++...-++...++|.|
T Consensus 148 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~ 191 (352)
T PLN02240 148 FPLSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAH 191 (352)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence 01111223455566665655545433 45544445544445543
No 107
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=98.14 E-value=5.4e-05 Score=69.97 Aligned_cols=110 Identities=23% Similarity=0.256 Sum_probs=76.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh--hhc------CCccceEeeCChh
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD--AAF------PLLKGVVATTDAV 76 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~--~~~------~~~~~~~~~~~~~ 76 (332)
++||+|+| +|.-|++++..|+..+- +++|+.+++ +. +.++.+ ... .+..++..++|+.
T Consensus 1 ~~kI~ViG-aGswGTALA~~la~ng~-------~V~lw~r~~--~~----~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~ 66 (329)
T COG0240 1 MMKIAVIG-AGSWGTALAKVLARNGH-------EVRLWGRDE--EI----VAEINETRENPKYLPGILLPPNLKATTDLA 66 (329)
T ss_pred CceEEEEc-CChHHHHHHHHHHhcCC-------eeEEEecCH--HH----HHHHHhcCcCccccCCccCCcccccccCHH
Confidence 46999999 69999999999998862 799999884 22 223332 221 1346788899999
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC-----cccchHHHHHHh
Q 020022 77 EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-----PANTNALILKEF 144 (332)
Q Consensus 77 ~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN-----P~~~~~~~~~~~ 144 (332)
+++++||+|+++. | ...++++++++..+-.++.+++.+|. +...+..++.+.
T Consensus 67 ~a~~~ad~iv~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~ 123 (329)
T COG0240 67 EALDGADIIVIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEE 123 (329)
T ss_pred HHHhcCCEEEEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCcchHHHHHHHH
Confidence 9999999999983 2 24455666666555556777777763 223455555554
No 108
>PLN02583 cinnamoyl-CoA reductase
Probab=98.13 E-value=2.3e-05 Score=72.52 Aligned_cols=176 Identities=12% Similarity=0.045 Sum_probs=99.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh--c-CCccceEeeCChhhhcC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA--F-PLLKGVVATTDAVEACT 80 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~--~-~~~~~~~~~~~~~~al~ 80 (332)
..++|+|+||+|++|++++..|+..|. +|++.+++...........++.... . .....+.-.....+++.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~-------~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~ 77 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGY-------TVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK 77 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc
Confidence 356899999999999999999998774 6888776421111111111111000 0 00011111123467889
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH------hC-CCC-CC--
Q 020022 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE------FA-PSI-PA-- 150 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~------~~-~~~-~~-- 150 (332)
++|.|++.++.+........+.+..|+.....+.+.+.+.... .+||++|.-.... +.-.. +. ..+ ++
T Consensus 78 ~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v-~riV~~SS~~a~~-~~~~~~~~~~~~~E~~~~~~~~ 155 (297)
T PLN02583 78 GCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTI-EKVVFTSSLTAVI-WRDDNISTQKDVDERSWSDQNF 155 (297)
T ss_pred CCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEecchHhee-cccccCCCCCCCCcccCCCHHH
Confidence 9999998776443221224567889999999999998876312 3566555422111 00000 00 000 00
Q ss_pred ---Cc-EEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 151 ---KN-ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 151 ---~~-i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
.. .++.+.....++.+.+++..+++..-++...|+|..
T Consensus 156 ~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~ 197 (297)
T PLN02583 156 CRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPS 197 (297)
T ss_pred HhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCC
Confidence 01 355667777777666666668877777766677753
No 109
>PRK06194 hypothetical protein; Provisional
Probab=98.11 E-value=3.1e-05 Score=70.90 Aligned_cols=161 Identities=17% Similarity=0.106 Sum_probs=89.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhhhcC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEACT 80 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~al~ 80 (332)
+.++|.|+||+|++|++++..|+..|. +++++|++. +.++....++...... ...++.-..+..++++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 75 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-------KLVLADVQQ--DALDRAVAELRAQGAEVLGVRTDVSDAAQVEALAD 75 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 446899999999999999999998764 789999874 3343333333221100 0001111111222222
Q ss_pred -------CCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHH----HHHHHHhhcCC----CeEEEEecCcccchHH
Q 020022 81 -------GVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKA----QASALEQHAAP----NCKVLVVANPANTNAL 139 (332)
Q Consensus 81 -------~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~----i~~~i~~~~~~----~~~viv~tNP~~~~~~ 139 (332)
..|+||+.||..... ..+.+ ..+..|+..... +.+.+.+.+.+ .+.++++|.-...
T Consensus 76 ~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--- 152 (287)
T PRK06194 76 AALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL--- 152 (287)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc---
Confidence 469999999975421 12222 335566654444 44445554421 1456666543221
Q ss_pred HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeee
Q 020022 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~ 182 (332)
.+.+....++.+..-...+...+++.++.....++..
T Consensus 153 ------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~ 189 (287)
T PRK06194 153 ------LAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGAS 189 (287)
T ss_pred ------cCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence 1122223466677666677777888887766667633
No 110
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=98.08 E-value=2.8e-05 Score=65.48 Aligned_cols=92 Identities=16% Similarity=0.256 Sum_probs=58.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
|+||++|| .|.+|+.++..|+..|. ++..||+++ ++++ ++.+. ......+..+++++||+
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~-------~v~~~d~~~--~~~~----~~~~~------g~~~~~s~~e~~~~~dv 60 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGY-------EVTVYDRSP--EKAE----ALAEA------GAEVADSPAEAAEQADV 60 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTT-------EEEEEESSH--HHHH----HHHHT------TEEEESSHHHHHHHBSE
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCC-------eEEeeccch--hhhh----hhHHh------hhhhhhhhhhHhhcccc
Confidence 46999999 89999999999998764 899999873 3332 23322 13455678899999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHH--HHhhcCCCeEEEEec
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASA--LEQHAAPNCKVLVVA 131 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~--i~~~~~~~~~viv~t 131 (332)
|+.+-. +-+.++++... +.....++.++|..|
T Consensus 61 vi~~v~---------------~~~~v~~v~~~~~i~~~l~~g~iiid~s 94 (163)
T PF03446_consen 61 VILCVP---------------DDDAVEAVLFGENILAGLRPGKIIIDMS 94 (163)
T ss_dssp EEE-SS---------------SHHHHHHHHHCTTHGGGS-TTEEEEE-S
T ss_pred eEeecc---------------cchhhhhhhhhhHHhhccccceEEEecC
Confidence 998731 33445555555 545444555555544
No 111
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=98.07 E-value=0.0002 Score=61.99 Aligned_cols=96 Identities=17% Similarity=0.144 Sum_probs=61.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
||+++|+| +|++|++++..+...+. |+..--.+. ++.+++....+.- .++. ....+|.+.||+
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~-------eV~igs~r~-~~~~~a~a~~l~~-------~i~~-~~~~dA~~~aDV 63 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGH-------EVIIGSSRG-PKALAAAAAALGP-------LITG-GSNEDAAALADV 63 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCC-------eEEEecCCC-hhHHHHHHHhhcc-------cccc-CChHHHHhcCCE
Confidence 46899999 79999999999998763 777775554 3334333332221 2223 356789999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~ 134 (332)
||++.- +.... ++.+.++..- .+.+||-.|||.
T Consensus 64 VvLAVP------------~~a~~----~v~~~l~~~~-~~KIvID~tnp~ 96 (211)
T COG2085 64 VVLAVP------------FEAIP----DVLAELRDAL-GGKIVIDATNPI 96 (211)
T ss_pred EEEecc------------HHHHH----hHHHHHHHHh-CCeEEEecCCCc
Confidence 999942 12233 4444444432 355777889994
No 112
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.06 E-value=2.6e-05 Score=77.53 Aligned_cols=117 Identities=14% Similarity=0.086 Sum_probs=73.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh------cC--CccceEe----e
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA------FP--LLKGVVA----T 72 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~------~~--~~~~~~~----~ 72 (332)
.+.|.|+||+|++|++++..|+..|. +|++++++. +++.....++.+.. .. ...-+.. .
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G~-------~Vval~Rn~--ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~ 150 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSA--QRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP 150 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHhhhhccccccccccCceEEEEecCCCH
Confidence 46899999999999999999998763 788888874 33332222221100 00 0000111 1
Q ss_pred CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 73 TDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 73 ~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+..+++.++|+||+++|.......+....+..|....+.+++.+.+... .+||++|.
T Consensus 151 esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agV--gRIV~VSS 208 (576)
T PLN03209 151 DQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKV--NHFILVTS 208 (576)
T ss_pred HHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCC--CEEEEEcc
Confidence 12345788999999999876432222334456788888899988887652 35666663
No 113
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.05 E-value=2.1e-05 Score=74.00 Aligned_cols=177 Identities=16% Similarity=0.151 Sum_probs=100.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGV 82 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~a 82 (332)
++.++.||||+||+|.+++..|...+.. .+|+++|..+.......+..++....... ...+........|+.++
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~-----~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~ 77 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELK-----LEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA 77 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccc-----cEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc
Confidence 4568999999999999999999987632 28999998753122222212110000000 11222334577899999
Q ss_pred cEEEE-eCCCCCCCCC-CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH---HH-HHHhCCCCCCCc--EE
Q 020022 83 NIAVM-VGGFPRKEGM-ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA---LI-LKEFAPSIPAKN--IT 154 (332)
Q Consensus 83 DiVi~-~ag~~~~~~~-~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~---~~-~~~~~~~~~~~~--i~ 154 (332)
.|+| +|+....... .++.....|+...+.+.+.+.+.+-+ .+++|....+.- .+ -....-.+|..- .+
T Consensus 78 -~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~---~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y 153 (361)
T KOG1430|consen 78 -VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVK---RLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPY 153 (361)
T ss_pred -eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCC---EEEEecCceEEeCCeecccCCCCCCCcccccccc
Confidence 5555 4443222223 46777789999999999999998742 344543333211 10 011101234221 46
Q ss_pred EechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCC
Q 020022 155 CLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSS 190 (332)
Q Consensus 155 ~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~ 190 (332)
+.|.....++....+..-+....-+|...|+|+ |+
T Consensus 154 ~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGp-gd 188 (361)
T KOG1430|consen 154 GESKALAEKLVLEANGSDDLYTCALRPPGIYGP-GD 188 (361)
T ss_pred chHHHHHHHHHHHhcCCCCeeEEEEccccccCC-CC
Confidence 767766555544443333345566676667786 44
No 114
>PLN02686 cinnamoyl-CoA reductase
Probab=98.02 E-value=2.5e-05 Score=74.48 Aligned_cols=174 Identities=15% Similarity=0.120 Sum_probs=99.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh--------hcC-CccceEeeCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA--------AFP-LLKGVVATTD 74 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~--------~~~-~~~~~~~~~~ 74 (332)
+.++|+|+||+|++|++++..|+..|. +|+++..+. +.+... .++... ... ...++.-...
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G~-------~V~~~~r~~--~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~ 121 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHGY-------SVRIAVDTQ--EDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPES 121 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHH-HHHhhhccccccCCceEEEEcCCCCHHH
Confidence 457999999999999999999998763 676655442 222111 111100 000 0011111123
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCC--CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc-cchH--------HHHHH
Q 020022 75 AVEACTGVNIAVMVGGFPRKEGM--ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA-NTNA--------LILKE 143 (332)
Q Consensus 75 ~~~al~~aDiVi~~ag~~~~~~~--~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~-~~~~--------~~~~~ 143 (332)
..++++++|.||++++.....+. ........|+...+++.+.+.+...- .++|+.|... .+.- ..+.+
T Consensus 122 l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v-~r~V~~SS~~~~vyg~~~~~~~~~~i~E 200 (367)
T PLN02686 122 LHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESV-RKCVFTSSLLACVWRQNYPHDLPPVIDE 200 (367)
T ss_pred HHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCc-cEEEEeccHHHhcccccCCCCCCcccCC
Confidence 45678899999999886432221 12344567889899999988875211 2455555421 1000 00000
Q ss_pred hC-C--CCC--CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 144 FA-P--SIP--AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 144 ~~-~--~~~--~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
-. . ..+ +...++.+++...++.+.+++..|++..-++...|+|..
T Consensus 201 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 201 ESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG 250 (367)
T ss_pred CCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence 00 0 001 112366778887788777788888888888877778863
No 115
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=98.01 E-value=3.8e-05 Score=72.43 Aligned_cols=107 Identities=21% Similarity=0.219 Sum_probs=62.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc----CCccceEeeCChhhhcC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PLLKGVVATTDAVEACT 80 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~----~~~~~~~~~~~~~~al~ 80 (332)
+|||+|+| +|.||+.++..|...|. +|.++|+++..+.+......+.+... ....++..+++. ++++
T Consensus 2 ~mkI~IiG-~G~mG~~~A~~L~~~G~-------~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 72 (341)
T PRK08229 2 MARICVLG-AGSIGCYLGGRLAAAGA-------DVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALA 72 (341)
T ss_pred CceEEEEC-CCHHHHHHHHHHHhcCC-------cEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccCh-hhcc
Confidence 36899999 79999999999998763 68999985311111100000000000 001123344444 6789
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
++|+||++...+. ..++++.+..+..++.+|+..+|..+.
T Consensus 73 ~~D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~ 112 (341)
T PRK08229 73 TADLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRN 112 (341)
T ss_pred CCCEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCc
Confidence 9999999863221 123344455554566667777887654
No 116
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.00 E-value=2.4e-05 Score=71.46 Aligned_cols=98 Identities=21% Similarity=0.313 Sum_probs=66.8
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEE
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVM 87 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~ 87 (332)
|.|+||+|++|++++..|+..+. +|+.+++++. .......+ .. ..+.. ....++++++|+||+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~--~~-----~~~~~-~~~~~~~~~~D~Vvh 63 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH-------EVTILTRSPP--AGANTKWE--GY-----KPWAP-LAESEALEGADAVIN 63 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC-------EEEEEeCCCC--CCCcccce--ee-----ecccc-cchhhhcCCCCEEEE
Confidence 57999999999999999998763 7899998752 21111000 00 00011 234577899999999
Q ss_pred eCCCCCCCC-C---CHHHHHHhhHHHHHHHHHHHHhhcC
Q 020022 88 VGGFPRKEG-M---ERKDVMSKNVSIYKAQASALEQHAA 122 (332)
Q Consensus 88 ~ag~~~~~~-~---~r~~~~~~n~~i~~~i~~~i~~~~~ 122 (332)
+|+.+...+ . ...++...|+...+.+++.++++..
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 102 (292)
T TIGR01777 64 LAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQ 102 (292)
T ss_pred CCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCC
Confidence 998754322 1 2345677899999999999998763
No 117
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.99 E-value=7.1e-05 Score=69.92 Aligned_cols=104 Identities=19% Similarity=0.257 Sum_probs=65.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh----cCCccceEeeCChhhhcCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----FPLLKGVVATTDAVEACTG 81 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~----~~~~~~~~~~~~~~~al~~ 81 (332)
|||+|+| +|.+|+.++..|+..+. ++.++|+++ +.++....+..+.. ......+...++..+++++
T Consensus 2 mkI~iiG-~G~mG~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (325)
T PRK00094 2 MKIAVLG-AGSWGTALAIVLARNGH-------DVTLWARDP--EQAAEINADRENPRYLPGIKLPDNLRATTDLAEALAD 71 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhC
Confidence 5899999 69999999999998753 789999874 33322211100000 0011234555666778899
Q ss_pred CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022 82 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (332)
Q Consensus 82 aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~ 135 (332)
+|+||++... ..++++.+.+..+..++.+++..+|-++
T Consensus 72 ~D~vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~ 109 (325)
T PRK00094 72 ADLILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIE 109 (325)
T ss_pred CCEEEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeeccc
Confidence 9999998421 1234444555555545667777877554
No 118
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.99 E-value=0.00015 Score=69.63 Aligned_cols=120 Identities=18% Similarity=0.166 Sum_probs=69.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH--------HHhhhhcCCccceEeeCChhh
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM--------ELVDAAFPLLKGVVATTDAVE 77 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~--------dl~~~~~~~~~~~~~~~~~~~ 77 (332)
|||+||| +|.||..++..++. |. +++.+|+++ ++++.... .+++.......+++.+++..+
T Consensus 1 mkI~VIG-lGyvGl~~A~~lA~-G~-------~VigvD~d~--~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~ 69 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLLIAQ-NH-------EVVALDILP--SRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNE 69 (388)
T ss_pred CEEEEEC-CCHHHHHHHHHHHh-CC-------cEEEEECCH--HHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhh
Confidence 4899999 79999999977764 42 799999985 44332111 001000001224555666778
Q ss_pred hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccchHHHHH
Q 020022 78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTNALILK 142 (332)
Q Consensus 78 al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~~~~~~~ 142 (332)
+.++||+||++...+...... .-++..+++.++.|.+. .++..||+- |-|....-.+..
T Consensus 70 ~~~~ad~vii~Vpt~~~~k~~-----~~dl~~v~~v~~~i~~~-~~g~lVV~~STv~pgtt~~l~~ 129 (388)
T PRK15057 70 AYRDADYVIIATPTDYDPKTN-----YFNTSSVESVIKDVVEI-NPYAVMVIKSTVPVGFTAAMHK 129 (388)
T ss_pred hhcCCCEEEEeCCCCCccCCC-----CcChHHHHHHHHHHHhc-CCCCEEEEeeecCCchHHHHHH
Confidence 889999999997766322111 12334445555555553 355555544 457665544443
No 119
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=97.99 E-value=5.3e-05 Score=71.40 Aligned_cols=106 Identities=24% Similarity=0.319 Sum_probs=65.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCC-CceEEEEEeCCC---chhhhhhhHHHHhhhhc------CCccceEeeCChh
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTD-QPVILHMLDIPP---AAEALNGVKMELVDAAF------PLLKGVVATTDAV 76 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~-~~~ei~L~D~~~---~~~~l~~~~~dl~~~~~------~~~~~~~~~~~~~ 76 (332)
||+||| +|..|+++|..|...+...+. ...+|.|+.+++ +++..+. ..-.+... .+..+++.++++.
T Consensus 1 kI~VIG-aG~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~--in~~~~n~~ylpgi~Lp~~i~at~dl~ 77 (342)
T TIGR03376 1 RVAVVG-SGNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEI--INTTHENVKYLPGIKLPANLVAVPDLV 77 (342)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHH--HHhcCCCccccCCCcCCCCeEEECCHH
Confidence 699999 699999999999886522111 001799998843 1222111 11112111 1235678888999
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 77 EACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 77 ~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
+++++||+||++. | ...++++++++..+-+++..+|.+|
T Consensus 78 eal~~ADiIIlAV--P--------------s~~i~~vl~~l~~~l~~~~~iVs~t 116 (342)
T TIGR03376 78 EAAKGADILVFVI--P--------------HQFLEGICKQLKGHVKPNARAISCI 116 (342)
T ss_pred HHHhcCCEEEEEC--C--------------hHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 9999999999983 2 2445566666666544444455554
No 120
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.98 E-value=3.7e-05 Score=58.52 Aligned_cols=94 Identities=20% Similarity=0.238 Sum_probs=58.4
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccceEeeC-ChhhhcCCCcE
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI 84 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-~~~~al~~aDi 84 (332)
||+||| +|.+|++++..|+..+. . +.++.++ ++++ ++++....++. +.... +..++++.||+
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~-~---~~~v~~~~~r~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~adv 64 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGI-K---PHEVIIVSSRSP--EKAAELAKEYG---------VQATADDNEEAAQEADV 64 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-----GGEEEEEEESSH--HHHHHHHHHCT---------TEEESEEHHHHHHHTSE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCC-C---ceeEEeeccCcH--HHHHHHHHhhc---------cccccCChHHhhccCCE
Confidence 799999 79999999999998874 2 2267755 8874 44432222211 12223 57888999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP 133 (332)
||++.- | ..+.+++..+.... ++..+|-++||
T Consensus 65 vilav~----p------------~~~~~v~~~i~~~~-~~~~vis~~ag 96 (96)
T PF03807_consen 65 VILAVK----P------------QQLPEVLSEIPHLL-KGKLVISIAAG 96 (96)
T ss_dssp EEE-S-----G------------GGHHHHHHHHHHHH-TTSEEEEESTT
T ss_pred EEEEEC----H------------HHHHHHHHHHhhcc-CCCEEEEeCCC
Confidence 999842 1 11335555663333 55667666765
No 121
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.97 E-value=9e-05 Score=70.01 Aligned_cols=114 Identities=19% Similarity=0.180 Sum_probs=71.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHH---hhh--hcCCccceEeeCChhhh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMEL---VDA--AFPLLKGVVATTDAVEA 78 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl---~~~--~~~~~~~~~~~~~~~~a 78 (332)
.+|||+|+| +|.+|++++..|...+ .++++.+++ +..+....+- ... ......++..+++..++
T Consensus 6 ~~mkI~IiG-aGa~G~alA~~La~~g--------~v~l~~~~~--~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a 74 (341)
T PRK12439 6 REPKVVVLG-GGSWGTTVASICARRG--------PTLQWVRSA--ETADDINDNHRNSRYLGNDVVLSDTLRATTDFAEA 74 (341)
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCC--------CEEEEeCCH--HHHHHHHhcCCCcccCCCCcccCCCeEEECCHHHH
Confidence 468999999 6999999999998764 366777653 3222111110 000 01112356677788888
Q ss_pred cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc-----hHHHHHHh
Q 020022 79 CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT-----NALILKEF 144 (332)
Q Consensus 79 l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~-----~~~~~~~~ 144 (332)
++++|+||++.- ...++++++.+..+-.++..+|.++|-++. +...+.++
T Consensus 75 ~~~aDlVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~~ 129 (341)
T PRK12439 75 ANCADVVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEV 129 (341)
T ss_pred HhcCCEEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHHH
Confidence 999999999841 234556666666655556667788886553 34455554
No 122
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.96 E-value=2.1e-05 Score=69.42 Aligned_cols=166 Identities=15% Similarity=0.217 Sum_probs=98.2
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC--cEE
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV--NIA 85 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a--DiV 85 (332)
|.|+||+|++|++++..|+..+. ++..+......+... ... ..... ...++.-.....+++++. |.|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-------~v~~~~~~~~~~~~~-~~~--~~~~~-~~~dl~~~~~~~~~~~~~~~d~v 69 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-------EVIVLSRSSNSESFE-EKK--LNVEF-VIGDLTDKEQLEKLLEKANIDVV 69 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-------EEEEEESCSTGGHHH-HHH--TTEEE-EESETTSHHHHHHHHHHHTESEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-------ccccccccccccccc-ccc--ceEEE-EEeeccccccccccccccCceEE
Confidence 78999999999999999998763 444343332211111 100 00000 000000112345566666 999
Q ss_pred EEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH----HHhCCCCCCCcEEEechH
Q 020022 86 VMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL----KEFAPSIPAKNITCLTRL 159 (332)
Q Consensus 86 i~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~----~~~~~~~~~~~i~~~t~l 159 (332)
|++|+.... ...+..+....|+...+.+.+.+.+... .++++.|. ..+..... .+. +...+...++.+..
T Consensus 70 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~~i~~sS-~~~y~~~~~~~~~e~-~~~~~~~~Y~~~K~ 145 (236)
T PF01370_consen 70 IHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGV--KRFIFLSS-ASVYGDPDGEPIDED-SPINPLSPYGASKR 145 (236)
T ss_dssp EEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEE-GGGGTSSSSSSBETT-SGCCHSSHHHHHHH
T ss_pred EEeeccccccccccccccccccccccccccccccccccc--cccccccc-ccccccccccccccc-cccccccccccccc
Confidence 999987531 1134567788999999999999999873 35666654 22100000 000 00011123556677
Q ss_pred HHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 160 DHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 160 ds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
...++...++++.+++...++...|+|.+
T Consensus 146 ~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 146 AAEELLRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred ccccccccccccccccccccccccccccc
Confidence 77777777888889999999988888876
No 123
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=97.96 E-value=3.2e-05 Score=72.78 Aligned_cols=162 Identities=8% Similarity=-0.056 Sum_probs=89.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh---hhcCC----ccceEeeCChh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD---AAFPL----LKGVVATTDAV 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~---~~~~~----~~~~~~~~~~~ 76 (332)
+.++|.|+||+|++|++++..|+..|. +|+++++.+. .........+.. ..... ..++.-.....
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~-------~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 76 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGY-------EVHGIIRRSS-NFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLR 76 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-------EEEEEecccc-cccccchhhhccccccccCceEEEEecCCCHHHHH
Confidence 347899999999999999999998764 7888887531 100001111110 00000 00111111233
Q ss_pred hhcCC--CcEEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCC---eEEEEecCcccchHH---HHHHhCC
Q 020022 77 EACTG--VNIAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPN---CKVLVVANPANTNAL---ILKEFAP 146 (332)
Q Consensus 77 ~al~~--aDiVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~---~~viv~tNP~~~~~~---~~~~~~~ 146 (332)
+++++ .|+||++|+...... ......+..|+.....+++.+.++..+. .++|+.|. ..+... -..+- .
T Consensus 77 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss-~~vyg~~~~~~~E~-~ 154 (340)
T PLN02653 77 RWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS-SEMYGSTPPPQSET-T 154 (340)
T ss_pred HHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc-HHHhCCCCCCCCCC-C
Confidence 44553 599999998753221 2234455778888899999888876321 24555542 111000 00000 0
Q ss_pred CCCCCcEEEechHHHHHHHHHHHHHcCCC
Q 020022 147 SIPAKNITCLTRLDHNRALGQISEKLNVQ 175 (332)
Q Consensus 147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~ 175 (332)
-+.+...++.++.....+...+++..++.
T Consensus 155 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~ 183 (340)
T PLN02653 155 PFHPRSPYAVAKVAAHWYTVNYREAYGLF 183 (340)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHcCCe
Confidence 11223467888888778777778877764
No 124
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=97.95 E-value=0.00013 Score=68.47 Aligned_cols=171 Identities=15% Similarity=0.076 Sum_probs=91.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe--e--CChhhhcC-
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA--T--TDAVEACT- 80 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~--~--~~~~~al~- 80 (332)
|||.|+||+|++|++++..|+..|. +|+++|+... . .......+.+.......-+.. + ....++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 71 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH-------DVVILDNLCN-S-KRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD 71 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCC-c-hHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc
Confidence 4899999999999999999998763 7888876421 1 111111111110000000111 1 11233444
Q ss_pred -CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH----HHHHhCCCCCCCcE
Q 020022 81 -GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNI 153 (332)
Q Consensus 81 -~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~----~~~~~~~~~~~~~i 153 (332)
++|+||++|+..... .....+.+..|+.....+++.+++... .+++++|. ..+... .+.+-.+--.+...
T Consensus 72 ~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss-~~~yg~~~~~~~~E~~~~~~p~~~ 148 (338)
T PRK10675 72 HAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANV--KNLIFSSS-ATVYGDQPKIPYVESFPTGTPQSP 148 (338)
T ss_pred CCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEecc-HHhhCCCCCCccccccCCCCCCCh
Confidence 689999999865321 123457788999999999998887642 24555554 211000 00000000011223
Q ss_pred EEechHHHHHHHHHHHHH-cCCCCCCeeeeEEEecc
Q 020022 154 TCLTRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 154 ~~~t~lds~r~~~~la~~-l~v~~~~v~~~~v~G~h 188 (332)
++.+.....++...+++. .+++..-++...+.|.|
T Consensus 149 Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~ 184 (338)
T PRK10675 149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAH 184 (338)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCC
Confidence 555666666666666554 35554555655556654
No 125
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.95 E-value=8.8e-05 Score=66.16 Aligned_cols=121 Identities=23% Similarity=0.261 Sum_probs=67.0
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-CCccceEeeCChh--
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAV-- 76 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~~~~~~~~~~~~~-- 76 (332)
|..+.++|.|+||+|.+|++++..|+..|. ++.++++++ +.+.....++.+.. . ....++....+..
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGA-------RVVVTDRNE--EAAERVAAEILAGGRAIAVAADVSDEADVEAA 71 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 666678999999999999999999998763 799999874 33332222332100 0 0000110011111
Q ss_pred -----hhcCCCcEEEEeCCCCCCCC----CC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022 77 -----EACTGVNIAVMVGGFPRKEG----ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 77 -----~al~~aDiVi~~ag~~~~~~----~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN 132 (332)
+.+...|+||+++|...... .+ ..+.+..|+.. .+.+.+.+.+.. ...++++|.
T Consensus 72 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~~sS 141 (251)
T PRK07231 72 VAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG--GGAIVNVAS 141 (251)
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CcEEEEEcC
Confidence 12346799999998743211 12 22345566654 444444444433 245666654
No 126
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.94 E-value=5.8e-05 Score=69.90 Aligned_cols=107 Identities=13% Similarity=0.100 Sum_probs=61.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH---HHhhhhcCCccceEeeCChhhhcCCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM---ELVDAAFPLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~---dl~~~~~~~~~~~~~~~~~~~al~~a 82 (332)
|||+|+| +|.+|..++..|...|. ++.++++ + +..+.... .+..............++..++.+++
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~~~g~-------~V~~~~r-~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLLEAGR-------DVTFLVR-P--KRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPF 69 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCC-------ceEEEec-H--HHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCC
Confidence 5899999 69999999999998753 6899998 3 22222111 00000000000112234445556899
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL 139 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~ 139 (332)
|+||++.-.+ .+.++.+.+..+-.++..|+...|.++....
T Consensus 70 d~vilavk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~ 110 (305)
T PRK12921 70 DLVILAVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQ 110 (305)
T ss_pred CEEEEEeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHH
Confidence 9999985322 1234444555544455667778898764433
No 127
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.93 E-value=0.00018 Score=64.67 Aligned_cols=157 Identities=18% Similarity=0.133 Sum_probs=84.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV------- 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~------- 76 (332)
+.++|.|+||+|++|.+++..|+..|. ++.++|++. +.+.....++.........++.-..+..
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-------RVVIADIKP--ARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAV 75 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence 456899999999999999999998764 789999874 3333222222110000000111111111
Q ss_pred hhcCCCcEEEEeCCCCCC-C--CCC---HHHHHHhhHHHHHHHHHHHHhhc---CCCeEEEEecCcccchHHHHHHhCCC
Q 020022 77 EACTGVNIAVMVGGFPRK-E--GME---RKDVMSKNVSIYKAQASALEQHA---APNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 77 ~al~~aDiVi~~ag~~~~-~--~~~---r~~~~~~n~~i~~~i~~~i~~~~---~~~~~viv~tNP~~~~~~~~~~~~~~ 147 (332)
+.+...|++|+++|.... + ..+ ....+..|+.....+.+.+..+. .+++.++++|..... .+
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~---------~~ 146 (257)
T PRK07067 76 ERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR---------RG 146 (257)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC---------CC
Confidence 223468999999986431 1 112 23446677766666665554321 123566676653221 12
Q ss_pred CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+..-.++.++..-..+.+.+++.+. +.+++
T Consensus 147 ~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~ 177 (257)
T PRK07067 147 EALVSHYCATKAAVISYTQSAALALI--RHGIN 177 (257)
T ss_pred CCCCchhhhhHHHHHHHHHHHHHHhc--ccCeE
Confidence 23223455555555566666776653 34554
No 128
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.93 E-value=3.8e-05 Score=68.60 Aligned_cols=124 Identities=19% Similarity=0.140 Sum_probs=69.9
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChh
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV 76 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~ 76 (332)
|++ +.++|.|+||+|++|.+++..|+..|. ++.+++++.. +.++....++...... ...++....+..
T Consensus 1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~-------~V~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 72 (248)
T PRK07806 1 MGDLPGKTALVTGSSRGIGADTAKILAGAGA-------HVVVNYRQKA-PRANKVVAEIEAAGGRASAVGADLTDEESVA 72 (248)
T ss_pred CCCCCCcEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCch-HhHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 553 457899999999999999999998763 6788877632 2222222223221100 000111111111
Q ss_pred hh-------cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 77 EA-------CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 77 ~a-------l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+ +.+.|+||+.+|.......+....+..|......+.+.+.++..+.++++++|.
T Consensus 73 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 73 ALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred HHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 11 236899999988643222233344566777777777777665433346666654
No 129
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.92 E-value=3.9e-05 Score=65.30 Aligned_cols=97 Identities=21% Similarity=0.255 Sum_probs=64.1
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEE
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVM 87 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~ 87 (332)
|+|+||+|++|+.++..|+..+. +|+++-+++ +++.. .........++.-.....++++++|.||+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-------~V~~~~R~~--~~~~~-----~~~~~~~~~d~~d~~~~~~al~~~d~vi~ 66 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-------EVTALVRSP--SKAED-----SPGVEIIQGDLFDPDSVKAALKGADAVIH 66 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-------EEEEEESSG--GGHHH-----CTTEEEEESCTTCHHHHHHHHTTSSEEEE
T ss_pred eEEECCCChHHHHHHHHHHHCCC-------EEEEEecCc--hhccc-----ccccccceeeehhhhhhhhhhhhcchhhh
Confidence 78999999999999999999872 788888774 33221 00000000011111235788999999999
Q ss_pred eCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 88 VGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 88 ~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
++|.+.+ ..+.++.+.+.+++...+ +++++|
T Consensus 67 ~~~~~~~-----------~~~~~~~~~~a~~~~~~~--~~v~~s 97 (183)
T PF13460_consen 67 AAGPPPK-----------DVDAAKNIIEAAKKAGVK--RVVYLS 97 (183)
T ss_dssp CCHSTTT-----------HHHHHHHHHHHHHHTTSS--EEEEEE
T ss_pred hhhhhcc-----------cccccccccccccccccc--cceeee
Confidence 9876543 167788899988887533 555555
No 130
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.90 E-value=0.00012 Score=70.95 Aligned_cols=108 Identities=17% Similarity=0.142 Sum_probs=67.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC--------------ccceE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL--------------LKGVV 70 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~--------------~~~~~ 70 (332)
++||+||| .|.||..+|..|+..|. ++..+|+++ ++++. +.....+. ...+.
T Consensus 3 ~~kI~VIG-lG~~G~~~A~~La~~G~-------~V~~~D~~~--~~v~~----l~~g~~~~~e~~l~~~l~~~~~~g~l~ 68 (415)
T PRK11064 3 FETISVIG-LGYIGLPTAAAFASRQK-------QVIGVDINQ--HAVDT----INRGEIHIVEPDLDMVVKTAVEGGYLR 68 (415)
T ss_pred ccEEEEEC-cchhhHHHHHHHHhCCC-------EEEEEeCCH--HHHHH----HHCCCCCcCCCCHHHHHHHHhhcCcee
Confidence 57999999 79999999999998763 799999985 44432 11111110 11233
Q ss_pred eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-Ccccc
Q 020022 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANT 136 (332)
Q Consensus 71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~ 136 (332)
.+++ +++||+||++...|...+. ..++..+.+.++.|.++.+++.+||+-| .|...
T Consensus 69 ~~~~----~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgt 125 (415)
T PRK11064 69 ATTT----PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGA 125 (415)
T ss_pred eecc----cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCH
Confidence 3332 3589999999887754332 1234445555666666655666665554 46554
No 131
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.89 E-value=2.9e-05 Score=69.73 Aligned_cols=170 Identities=13% Similarity=0.043 Sum_probs=97.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
.++||+|+||+||||||++..|+..+ . +|...|.-- .+....+.+........+....-...-+..+|
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~eg--h-----~VIa~Dn~f-----tg~k~n~~~~~~~~~fel~~hdv~~pl~~evD 93 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEG--H-----EVIALDNYF-----TGRKENLEHWIGHPNFELIRHDVVEPLLKEVD 93 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcC--C-----eEEEEeccc-----ccchhhcchhccCcceeEEEeechhHHHHHhh
Confidence 35899999999999999999999876 2 788888653 22333344443222223344433445678999
Q ss_pred EEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccch-----HHHHHHhCCC---CCCCcE
Q 020022 84 IAVMVGGFPRKEG--MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTN-----ALILKEFAPS---IPAKNI 153 (332)
Q Consensus 84 iVi~~ag~~~~~~--~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~-----~~~~~~~~~~---~~~~~i 153 (332)
-|+++|.....++ .+..+....|.--........++.. ++++..|.. .+- ......+.+. +.++--
T Consensus 94 ~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~---aR~l~aSTs-eVYgdp~~hpq~e~ywg~vnpigpr~c 169 (350)
T KOG1429|consen 94 QIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARFLLASTS-EVYGDPLVHPQVETYWGNVNPIGPRSC 169 (350)
T ss_pred hhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC---ceEEEeecc-cccCCcccCCCccccccccCcCCchhh
Confidence 9999876433222 3333445556555555555555554 567666532 110 0000000000 122223
Q ss_pred EEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccC
Q 020022 154 TCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHS 189 (332)
Q Consensus 154 ~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg 189 (332)
+.-...-+.+|.+...+..|+...=.+.+..+|..+
T Consensus 170 ydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 170 YDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM 205 (350)
T ss_pred hhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc
Confidence 444566667888888888888665555555556433
No 132
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.88 E-value=0.00026 Score=64.57 Aligned_cols=114 Identities=13% Similarity=0.029 Sum_probs=64.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE--ee--CChhhh-
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV--AT--TDAVEA- 78 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~--~~--~~~~~a- 78 (332)
++++|.|+||+|++|++++..|+..|. +|+++++++ +.++. +..........+. .+ ....++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~~~~----l~~~~~~~~~~~~~D~~d~~~~~~~~ 69 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-------RVVGTVRSE--AARAD----FEALHPDRALARLLDVTDFDAIDAVV 69 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-------EEEEEeCCH--HHHHH----HHhhcCCCeeEEEccCCCHHHHHHHH
Confidence 456899999999999999999998763 789999874 22221 1111000000001 10 011122
Q ss_pred ------cCCCcEEEEeCCCCCC---CCCCHH---HHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecC
Q 020022 79 ------CTGVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQASAL----EQHAAPNCKVLVVAN 132 (332)
Q Consensus 79 ------l~~aDiVi~~ag~~~~---~~~~r~---~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tN 132 (332)
+...|+||++||.... ...+.. ..+..|+.-...+.+.+ ++.. ...+|++|.
T Consensus 70 ~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--~~~iv~iSS 137 (277)
T PRK06180 70 ADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR--RGHIVNITS 137 (277)
T ss_pred HHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC--CCEEEEEec
Confidence 2358999999997431 112332 34667776655555554 3332 245667664
No 133
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.87 E-value=0.00016 Score=68.76 Aligned_cols=110 Identities=15% Similarity=0.218 Sum_probs=68.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh--hhc------CCccceEeeCCh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD--AAF------PLLKGVVATTDA 75 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~--~~~------~~~~~~~~~~~~ 75 (332)
..+||+|+| +|..|+++|..|...+.......-++.|+.+++.- .-+..+.++++ ... .+..++..++|.
T Consensus 10 ~~~ki~ViG-aG~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~-~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl 87 (365)
T PTZ00345 10 GPLKVSVIG-SGNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIV-EGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDL 87 (365)
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHhcCCcccCCCCeEEEEEecccc-cchHHHHHHHhcCCCcccCCCCcCCCceEEecCH
Confidence 457999999 69999999999997652000000178899887420 01112233332 111 234678888898
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHh--hcCCCeEEEEec
Q 020022 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQ--HAAPNCKVLVVA 131 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~--~~~~~~~viv~t 131 (332)
.+++++||+||++. | ...++++++.+.. +-++++.+|.++
T Consensus 88 ~eav~~aDiIvlAV--P--------------sq~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 88 KEAVEDADLLIFVI--P--------------HQFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred HHHHhcCCEEEEEc--C--------------hHHHHHHHHHhccccccCCCCEEEEEe
Confidence 89999999999883 1 2446677777765 433444455444
No 134
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.87 E-value=0.00021 Score=64.19 Aligned_cols=154 Identities=19% Similarity=0.171 Sum_probs=81.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh--
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA-- 78 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a-- 78 (332)
.+++.|+||+|++|++++..|+..|. +|+++++++ +.......++.+.... ...+... ++ ..++
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~ 76 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGA-------AVAIADLNQ--DGANAVADEINKAGGK-AIGVAMDVTNEDAVNAGID 76 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHhcCce-EEEEECCCCCHHHHHHHHH
Confidence 57899999999999999999998764 688999874 3333222333221100 0001110 01 1111
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022 79 -----CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 79 -----l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~ 143 (332)
....|+||+++|..... ..+ .++.+..|+.. .+.+.+.+.+.+ +...++++|.-.. .
T Consensus 77 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~ss~~~-------~ 148 (262)
T PRK13394 77 KVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMGSVHS-------H 148 (262)
T ss_pred HHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEcchhh-------c
Confidence 23589999999874311 111 23445567665 666666662323 2345666653111 1
Q ss_pred hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+....++.+......+-+.+++.+ .+..++
T Consensus 149 --~~~~~~~~y~~sk~a~~~~~~~la~~~--~~~~i~ 181 (262)
T PRK13394 149 --EASPLKSAYVTAKHGLLGLARVLAKEG--AKHNVR 181 (262)
T ss_pred --CCCCCCcccHHHHHHHHHHHHHHHHHh--hhcCeE
Confidence 122323345555544444555566553 234555
No 135
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=97.87 E-value=0.00032 Score=68.20 Aligned_cols=111 Identities=12% Similarity=0.122 Sum_probs=68.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC----------ccceEeeC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL----------LKGVVATT 73 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~----------~~~~~~~~ 73 (332)
.+|||+||| .|.||..++..|+. +. ++..||+++ ++. ..+.....+. ..++..++
T Consensus 5 ~~mkI~vIG-lGyvGlpmA~~la~-~~-------~V~g~D~~~--~~v----e~l~~G~~~~~e~~~~~l~~~g~l~~t~ 69 (425)
T PRK15182 5 DEVKIAIIG-LGYVGLPLAVEFGK-SR-------QVVGFDVNK--KRI----LELKNGVDVNLETTEEELREARYLKFTS 69 (425)
T ss_pred CCCeEEEEC-cCcchHHHHHHHhc-CC-------EEEEEeCCH--HHH----HHHHCcCCCCCCCCHHHHHhhCCeeEEe
Confidence 568999999 89999999998775 32 799999985 333 2333222211 12345555
Q ss_pred ChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccc
Q 020022 74 DAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANT 136 (332)
Q Consensus 74 ~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~ 136 (332)
+. +++++||++|++.+.|.+...+ ..+..+..-.+.|.++..++..||+- |-|...
T Consensus 70 ~~-~~~~~advvii~Vptp~~~~~~------~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgt 126 (425)
T PRK15182 70 EI-EKIKECNFYIITVPTPINTYKQ------PDLTPLIKASETVGTVLNRGDIVVYESTVYPGC 126 (425)
T ss_pred CH-HHHcCCCEEEEEcCCCCCCCCC------cchHHHHHHHHHHHHhcCCCCEEEEecCCCCcc
Confidence 44 5789999999999888543211 12233334444555554455555554 445543
No 136
>PRK05865 hypothetical protein; Provisional
Probab=97.86 E-value=0.00011 Score=76.74 Aligned_cols=105 Identities=14% Similarity=0.154 Sum_probs=69.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||.|+||+|++|++++..|+..|. +++++|++.. ..... ... ....++.-..+..++++++|+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~-------~Vv~l~R~~~-~~~~~------~v~-~v~gDL~D~~~l~~al~~vD~V 65 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH-------EVVGIARHRP-DSWPS------SAD-FIAADIRDATAVESAMTGADVV 65 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC-------EEEEEECCch-hhccc------Cce-EEEeeCCCHHHHHHHHhCCCEE
Confidence 4899999999999999999998763 7888887631 11100 000 0000111112345678899999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA 134 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~ 134 (332)
|++|+.... ....|+.....+++.+++.+. .++|++|.+.
T Consensus 66 VHlAa~~~~-------~~~vNv~GT~nLLeAa~~~gv--kr~V~iSS~~ 105 (854)
T PRK05865 66 AHCAWVRGR-------NDHINIDGTANVLKAMAETGT--GRIVFTSSGH 105 (854)
T ss_pred EECCCcccc-------hHHHHHHHHHHHHHHHHHcCC--CeEEEECCcH
Confidence 999975421 356788888999999888753 3577777664
No 137
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00029 Score=63.68 Aligned_cols=160 Identities=14% Similarity=0.099 Sum_probs=82.4
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh---
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV--- 76 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~--- 76 (332)
|.. +.+++.|+||+|.+|.+++..|+..|. +|.+.|++. +.++....++.........++....+..
T Consensus 1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 71 (261)
T PRK08265 1 MIGLAGKVAIVTGGATLIGAAVARALVAAGA-------RVAIVDIDA--DNGAAVAASLGERARFIATDITDDAAIERAV 71 (261)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCeeEEEEecCCCHHHHHHHH
Confidence 553 457999999999999999999998774 789999874 2232222221100000000110011111
Q ss_pred ----hhcCCCcEEEEeCCCCCCC--CCCH---HHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCcccchHHHHHHhCC
Q 020022 77 ----EACTGVNIAVMVGGFPRKE--GMER---KDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 77 ----~al~~aDiVi~~ag~~~~~--~~~r---~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~~~~~~~ 146 (332)
+.+...|++|+.+|..... ..+. ...+..|+...-.+.+.+..+. .+...+|++|.-... .
T Consensus 72 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~---------~ 142 (261)
T PRK08265 72 ATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAK---------F 142 (261)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhc---------c
Confidence 2234679999999874322 2222 2344556654444443333221 133566666642221 1
Q ss_pred CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
+.+..-.++.+..--..+.+.++..+. +..|+
T Consensus 143 ~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~ 174 (261)
T PRK08265 143 AQTGRWLYPASKAAIRQLTRSMAMDLA--PDGIR 174 (261)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhc--ccCEE
Confidence 122222345555444566666776654 35666
No 138
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=97.85 E-value=0.00015 Score=67.65 Aligned_cols=110 Identities=25% Similarity=0.199 Sum_probs=62.9
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhc
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEAC 79 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al 79 (332)
|.+++|||+|+| +|.||..++..|...|. ++.++.+++ .+........+..... .....+...+. .++.
T Consensus 1 ~~~~~m~I~IiG-~GaiG~~lA~~L~~~g~-------~V~~~~r~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 70 (313)
T PRK06249 1 MDSETPRIGIIG-TGAIGGFYGAMLARAGF-------DVHFLLRSD-YEAVRENGLQVDSVHGDFHLPPVQAYRS-AEDM 70 (313)
T ss_pred CCCcCcEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEEeCC-HHHHHhCCeEEEeCCCCeeecCceEEcc-hhhc
Confidence 777889999999 69999999999998763 788998864 2211111011100000 00111223333 2356
Q ss_pred CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
..+|+||++.-... ..+.++.+.....++..++...|=++.
T Consensus 71 ~~~D~vilavK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~ 111 (313)
T PRK06249 71 PPCDWVLVGLKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGV 111 (313)
T ss_pred CCCCEEEEEecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCc
Confidence 78999999853221 123333444444456667777886653
No 139
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.85 E-value=0.00016 Score=67.82 Aligned_cols=104 Identities=11% Similarity=0.210 Sum_probs=64.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh----cCCccceEeeCChhhhc-C
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA----FPLLKGVVATTDAVEAC-T 80 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~----~~~~~~~~~~~~~~~al-~ 80 (332)
|||+|+| +|.+|++++..|...+. +|.|+++++ +..+....+-.+.. .....++..+++..+++ .
T Consensus 1 MkI~IiG-aGa~G~ala~~L~~~g~-------~V~l~~r~~--~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 70 (326)
T PRK14620 1 MKISILG-AGSFGTAIAIALSSKKI-------SVNLWGRNH--TTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSD 70 (326)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEecCH--HHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhC
Confidence 4899999 69999999999998763 789999863 33322211100111 11223566677777776 5
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHh-hcCCCeEEEEecCccc
Q 020022 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQ-HAAPNCKVLVVANPAN 135 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~-~~~~~~~viv~tNP~~ 135 (332)
++|+||++.- ...++++++.+.. +-.++..++..+|=.+
T Consensus 71 ~~Dliiiavk----------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~ 110 (326)
T PRK14620 71 NATCIILAVP----------------TQQLRTICQQLQDCHLKKNTPILICSKGIE 110 (326)
T ss_pred CCCEEEEEeC----------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCee
Confidence 8999999841 1224455555554 4335566777787653
No 140
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.85 E-value=0.00022 Score=65.98 Aligned_cols=106 Identities=18% Similarity=0.222 Sum_probs=61.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHH---HHhhhhcCCccceEeeCChhhhcCCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKM---ELVDAAFPLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~---dl~~~~~~~~~~~~~~~~~~~al~~a 82 (332)
|||+|+| +|.+|+.++..|...|. ++.++|+++ +.++.... .+.+.. ........++..+ ++++
T Consensus 1 m~I~IiG-~G~~G~~~a~~L~~~g~-------~V~~~~r~~--~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~-~~~~ 67 (304)
T PRK06522 1 MKIAILG-AGAIGGLFGAALAQAGH-------DVTLVARRG--AHLDALNENGLRLEDGE--ITVPVLAADDPAE-LGPQ 67 (304)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-------eEEEEECCh--HHHHHHHHcCCcccCCc--eeecccCCCChhH-cCCC
Confidence 4899999 69999999999998762 799999853 22321111 000000 0011112233434 4899
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~ 140 (332)
|+||++.... -..++++.+..+-.++..|+...|.++....+
T Consensus 68 d~vila~k~~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~~l 109 (304)
T PRK06522 68 DLVILAVKAY----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLEEL 109 (304)
T ss_pred CEEEEecccc----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHHHH
Confidence 9999985321 12344445554433556778888987654433
No 141
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.84 E-value=0.00024 Score=63.12 Aligned_cols=157 Identities=16% Similarity=0.230 Sum_probs=79.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV------- 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~------- 76 (332)
+.+++.|+||+|++|+.++..|+..|. .+.+.+++. +.++....++.........++.......
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-------IVGLHGTRV--EKLEALAAELGERVKIFPANLSDRDEVKALGQKAE 75 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence 457999999999999999999998763 577887763 3333222221100000000000000111
Q ss_pred hhcCCCcEEEEeCCCCCCC---CC---CHHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHHHHhCCCC
Q 020022 77 EACTGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 77 ~al~~aDiVi~~ag~~~~~---~~---~r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~~~~~~~~ 148 (332)
+.+...|+||+++|..... .. +....+..|+.....+++.+.+.. .+...++++|..... .+.
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~ 146 (245)
T PRK12936 76 ADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV---------TGN 146 (245)
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC---------cCC
Confidence 1235689999999975321 11 223445666665444444433210 123457777754331 122
Q ss_pred CCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 149 PAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 149 ~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
|....++.+......+.+.+++.+. +..++
T Consensus 147 ~~~~~Y~~sk~a~~~~~~~la~~~~--~~~i~ 176 (245)
T PRK12936 147 PGQANYCASKAGMIGFSKSLAQEIA--TRNVT 176 (245)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhh--HhCeE
Confidence 2222344444444455556666543 23454
No 142
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.83 E-value=8.8e-05 Score=67.80 Aligned_cols=96 Identities=19% Similarity=0.326 Sum_probs=66.4
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC--cE
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV--NI 84 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a--Di 84 (332)
||.|+||+|++|++++..|+..|. +++++++.. .|+.+.. ...++++++ |+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~-------~v~~~~r~~---------~d~~~~~-----------~~~~~~~~~~~d~ 53 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR-------VVVALTSSQ---------LDLTDPE-----------ALERLLRAIRPDA 53 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC-------EEEEeCCcc---------cCCCCHH-----------HHHHHHHhCCCCE
Confidence 689999999999999999988753 788887641 2332221 234555555 99
Q ss_pred EEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 85 AVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 85 Vi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
||++++..... .......+..|+.....+++.+.+.. . ++|++|.
T Consensus 54 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--~~v~~Ss 100 (287)
T TIGR01214 54 VVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A--RLVHIST 100 (287)
T ss_pred EEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEee
Confidence 99999865322 12345667889999999999887764 2 4555553
No 143
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.82 E-value=0.00013 Score=65.79 Aligned_cols=39 Identities=31% Similarity=0.313 Sum_probs=33.7
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
|+++.+++.|+||+|.+|++++..|+..|. +|.+.|+++
T Consensus 1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~ 39 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGA-------RVAVLDKSA 39 (262)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 766678999999999999999999998764 789999874
No 144
>PRK05717 oxidoreductase; Validated
Probab=97.81 E-value=0.00014 Score=65.46 Aligned_cols=150 Identities=16% Similarity=0.114 Sum_probs=81.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------hh
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------EA 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~-------~a 78 (332)
++|.|+||+|++|++++..|+..|. ++.++|++. +.+.....++.........++....+.. +.
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGW-------QVVLADLDR--ERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQ 81 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 6899999999999999999998763 789998764 2222111111100000000110000111 11
Q ss_pred cCCCcEEEEeCCCCCCC-----CCC---HHHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCcccchHHHHHHhCCCCC
Q 020022 79 CTGVNIAVMVGGFPRKE-----GME---RKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPSIP 149 (332)
Q Consensus 79 l~~aDiVi~~ag~~~~~-----~~~---r~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~~~~~~~~~~ 149 (332)
+...|++|+.+|..... ..+ ....+..|+.....+.+.+.++. .+.+.+|++|..... .+.+
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~---------~~~~ 152 (255)
T PRK05717 82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR---------QSEP 152 (255)
T ss_pred hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc---------CCCC
Confidence 23579999999975321 112 23456777776666666665421 122456676643221 1112
Q ss_pred CCcEEEechHHHHHHHHHHHHHcC
Q 020022 150 AKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 150 ~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
..-.++.++.--..+.+.+++.++
T Consensus 153 ~~~~Y~~sKaa~~~~~~~la~~~~ 176 (255)
T PRK05717 153 DTEAYAASKGGLLALTHALAISLG 176 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhc
Confidence 122456666655677777888776
No 145
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=97.81 E-value=0.00011 Score=67.78 Aligned_cols=151 Identities=14% Similarity=0.139 Sum_probs=89.1
Q ss_pred EEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--CCcEEE
Q 020022 9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVNIAV 86 (332)
Q Consensus 9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~aDiVi 86 (332)
.|+||+|++|++++..|+..+. ++.+..... ..|+.+.. +..+.++ +.|+||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~-------~v~~~~~~~--------~~Dl~~~~-----------~l~~~~~~~~~d~Vi 54 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF-------TNLVLRTHK--------ELDLTRQA-----------DVEAFFAKEKPTYVI 54 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC-------cEEEeeccc--------cCCCCCHH-----------HHHHHHhccCCCEEE
Confidence 3899999999999999987652 334443221 12333221 1223333 579999
Q ss_pred EeCCCCCC---CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchH----HHHHHh--CCC-CCCCc-EEE
Q 020022 87 MVGGFPRK---EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNA----LILKEF--APS-IPAKN-ITC 155 (332)
Q Consensus 87 ~~ag~~~~---~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~----~~~~~~--~~~-~~~~~-i~~ 155 (332)
++|+.... ......++...|.....++++.+++...+ ++|+.|.- .+-. .-..+- ..+ ..+.. .++
T Consensus 55 h~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~--~~i~~SS~-~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~ 131 (306)
T PLN02725 55 LAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVK--KLLFLGSS-CIYPKFAPQPIPETALLTGPPEPTNEWYA 131 (306)
T ss_pred EeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCC--eEEEeCce-eecCCCCCCCCCHHHhccCCCCCCcchHH
Confidence 99986421 12334567788999999999999987532 45555441 1100 000000 000 11112 356
Q ss_pred echHHHHHHHHHHHHHcCCCCCCeeeeEEEecc
Q 020022 156 LTRLDHNRALGQISEKLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 156 ~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~h 188 (332)
.++....++...+.+..+++...++...|+|.+
T Consensus 132 ~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 164 (306)
T PLN02725 132 IAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPH 164 (306)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecceeCCC
Confidence 666666666666667778888888877788864
No 146
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.80 E-value=0.00026 Score=63.35 Aligned_cols=153 Identities=15% Similarity=0.127 Sum_probs=78.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCCh-------hhh
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA-------VEA 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~-------~~a 78 (332)
|+|.|+||+|++|.+++..|+..|. ++.++++++ +.+......+.........++.-..+. .+.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 71 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH-------KVIATGRRQ--ERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE 71 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4899999999999999999998763 789999874 333221111110000000011000111 122
Q ss_pred cCCCcEEEEeCCCCC--CC--CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022 79 CTGVNIAVMVGGFPR--KE--GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 79 l~~aDiVi~~ag~~~--~~--~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~ 147 (332)
+.+.|+||+++|... .+ ..+.+ ..+..|+.. .+.+.+.+.+.. ...++++|..... .+
T Consensus 72 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~---------~~ 140 (248)
T PRK10538 72 WRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN--HGHIINIGSTAGS---------WP 140 (248)
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEECCcccC---------CC
Confidence 347999999998742 11 12332 345566555 444455454432 2456677653221 11
Q ss_pred CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 148 IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 148 ~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
++....++.+..-...+...++..++ +..|+
T Consensus 141 ~~~~~~Y~~sK~~~~~~~~~l~~~~~--~~~i~ 171 (248)
T PRK10538 141 YAGGNVYGATKAFVRQFSLNLRTDLH--GTAVR 171 (248)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhc--CCCcE
Confidence 22222344444443455556666554 34454
No 147
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.0012 Score=58.40 Aligned_cols=120 Identities=15% Similarity=0.157 Sum_probs=65.6
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chh--
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAV-- 76 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~-- 76 (332)
++.++|.|+||+|.+|++++..|+..|. +|.++++++ +.+.....++... .....+... + +..
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~--~~~~~~~~D~~~~~~~~~~ 72 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGY-------KVAITARDQ--KELEEAAAELNNK--GNVLGLAADVRDEADVQRA 72 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEeeCCH--HHHHHHHHHHhcc--CcEEEEEccCCCHHHHHHH
Confidence 3457899999999999999999987653 788999874 3333222333211 000011111 1 111
Q ss_pred -----hhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCc
Q 020022 77 -----EACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHA-APNCKVLVVANP 133 (332)
Q Consensus 77 -----~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP 133 (332)
+.+..+|+||+.+|..... ..+.+ +.+..|+.....+.+.+.+.. .+...++++|..
T Consensus 73 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (237)
T PRK07326 73 VDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL 141 (237)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence 2234789999999865321 12222 345556654444444443321 123456666653
No 148
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.78 E-value=0.00029 Score=66.15 Aligned_cols=78 Identities=28% Similarity=0.315 Sum_probs=51.5
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh----hcCCccceEeeCChh
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA----AFPLLKGVVATTDAV 76 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~----~~~~~~~~~~~~~~~ 76 (332)
|+. +|||+||| +|.+|+.++..|+..|. +|+++|+++ +..+.....-.+. ......++..+++..
T Consensus 1 ~~~-~m~I~iIG-~G~mG~~ia~~L~~~G~-------~V~~~~r~~--~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~ 69 (328)
T PRK14618 1 MHH-GMRVAVLG-AGAWGTALAVLAASKGV-------PVRLWARRP--EFAAALAAERENREYLPGVALPAELYPTADPE 69 (328)
T ss_pred CCC-CCeEEEEC-cCHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHhCcccccCCCCcCCCCeEEeCCHH
Confidence 544 46999999 69999999999998763 799999974 3332221110000 011122355666777
Q ss_pred hhcCCCcEEEEeC
Q 020022 77 EACTGVNIAVMVG 89 (332)
Q Consensus 77 ~al~~aDiVi~~a 89 (332)
++++++|+||++.
T Consensus 70 e~~~~aD~Vi~~v 82 (328)
T PRK14618 70 EALAGADFAVVAV 82 (328)
T ss_pred HHHcCCCEEEEEC
Confidence 8889999999984
No 149
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.77 E-value=0.00028 Score=63.39 Aligned_cols=156 Identities=17% Similarity=0.160 Sum_probs=81.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh-----
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV----- 76 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~----- 76 (332)
.++|.|+||+|++|..++..|+..|. +|++.|+++ +.++.....+.+..... ..++.-..+..
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA-------EVILNGRDP--AKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA 80 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence 36999999999999999999998764 789999874 33333222232210000 00110000111
Q ss_pred --hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcC--CCeEEEEecCcccchHHHHHHhCC
Q 020022 77 --EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 77 --~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~--~~~~viv~tNP~~~~~~~~~~~~~ 146 (332)
+.+...|+||+.+|..... ..+ ....+..|+.....+.+.+.++.. +.++++++|..... .
T Consensus 81 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~---------~ 151 (255)
T PRK07523 81 FEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA---------L 151 (255)
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc---------c
Confidence 2234579999999875321 112 234456776655555555544321 13567777654221 1
Q ss_pred CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
+.+....++.+......+-+.++..+. +.+++
T Consensus 152 ~~~~~~~y~~sK~a~~~~~~~~a~e~~--~~gi~ 183 (255)
T PRK07523 152 ARPGIAPYTATKGAVGNLTKGMATDWA--KHGLQ 183 (255)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhh--HhCeE
Confidence 122222344444444455555665543 33454
No 150
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00036 Score=63.39 Aligned_cols=121 Identities=17% Similarity=0.054 Sum_probs=69.1
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC------
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD------ 74 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~------ 74 (332)
|+++.++|.|+||+|.+|..++..|+..|. .+.+.++++ +.++....++..... ...++.-..+
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~ 70 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGA-------RVAIGDLDE--ALAKETAAELGLVVG-GPLDVTDPASFAAFLD 70 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhccceE-EEccCCCHHHHHHHHH
Confidence 666778999999999999999999998764 688888874 333322222211100 0000000001
Q ss_pred -hhhhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCc
Q 020022 75 -AVEACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 75 -~~~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP 133 (332)
..+...+.|++|+.+|..... ..+ ....+..|+. ..+.+.+.+.+.. .+.|+++|.-
T Consensus 71 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~g~iv~isS~ 138 (273)
T PRK07825 71 AVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG--RGHVVNVASL 138 (273)
T ss_pred HHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEEcCc
Confidence 122235689999999975321 112 2234556664 4455556555543 2467777643
No 151
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.76 E-value=0.00023 Score=62.98 Aligned_cols=121 Identities=22% Similarity=0.198 Sum_probs=67.0
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh-
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV- 76 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~- 76 (332)
|.++.++|.|+||+|++|..++..|+..|. ++.++++++ +.++....++....... ..++.-.....
T Consensus 1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (246)
T PRK05653 1 MSLQGKTALVTGASRGIGRAIALRLAADGA-------KVVIYDSNE--EAAEALAAELRAAGGEARVLVFDVSDEAAVRA 71 (246)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 666668999999999999999999998763 689999874 33322222222110000 00000000111
Q ss_pred ------hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecC
Q 020022 77 ------EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVAN 132 (332)
Q Consensus 77 ------~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tN 132 (332)
+.+...|.||+.+|..... ..+. .+.+..|+.....+.+.+. +.. . .+++++|.
T Consensus 72 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~-~~ii~~ss 141 (246)
T PRK05653 72 LIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-Y-GRIVNISS 141 (246)
T ss_pred HHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C-cEEEEECc
Confidence 1234569999998864321 1222 2345566666655555553 333 2 35666663
No 152
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.75 E-value=0.0011 Score=58.64 Aligned_cols=158 Identities=16% Similarity=0.184 Sum_probs=100.4
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cCCccceEee------
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FPLLKGVVAT------ 72 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~~~~~~~~~------ 72 (332)
|+. +.+-+.|+||++.+|.+++..|++.|. .++|..++. ++|+..+.++.+.. .+....++-.
T Consensus 1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~-------~vvl~aRR~--drL~~la~~~~~~~~~~~~~DVtD~~~~~~~ 71 (246)
T COG4221 1 MTTLKGKVALITGASSGIGEATARALAEAGA-------KVVLAARRE--ERLEALADEIGAGAALALALDVTDRAAVEAA 71 (246)
T ss_pred CCCCCCcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEeccH--HHHHHHHHhhccCceEEEeeccCCHHHHHHH
Confidence 544 345678999999999999999999875 799999984 78887777776411 1111122111
Q ss_pred -CChhhhcCCCcEEEEeCCCCCCCC------CCHHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022 73 -TDAVEACTGVNIAVMVGGFPRKEG------MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 73 -~~~~~al~~aDiVi~~ag~~~~~~------~~r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~ 141 (332)
....+.+...|++|..||..+-.. .++...+..|+.- ++.+.+.+.+.. .+.||+++.=..
T Consensus 72 i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~--~G~IiN~~SiAG------ 143 (246)
T COG4221 72 IEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK--SGHIINLGSIAG------ 143 (246)
T ss_pred HHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC--CceEEEeccccc------
Confidence 113445668999999999864311 1345566778754 455566666653 457888875332
Q ss_pred HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
++ -||-..++++|+--..-|...|-+.+. ..+|+
T Consensus 144 -~~--~y~~~~vY~ATK~aV~~fs~~LR~e~~--g~~IR 177 (246)
T COG4221 144 -RY--PYPGGAVYGATKAAVRAFSLGLRQELA--GTGIR 177 (246)
T ss_pred -cc--cCCCCccchhhHHHHHHHHHHHHHHhc--CCCee
Confidence 22 245556888887766555555544432 46666
No 153
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00019 Score=63.96 Aligned_cols=153 Identities=14% Similarity=0.153 Sum_probs=81.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC--------
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD-------- 74 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~-------- 74 (332)
+.++|.|+||+|++|++++..|+..|. ++.++++++ +.+.....++.. . ...+... ++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~-~---~~~~~~D~~~~~~~~~~~ 71 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-------RVAITGRDP--ASLEAARAELGE-S---ALVIRADAGDVAAQKALA 71 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCH--HHHHHHHHHhCC-c---eEEEEecCCCHHHHHHHH
Confidence 447999999999999999999998764 688998873 223221111110 0 0001110 11
Q ss_pred --hhhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022 75 --AVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 75 --~~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~ 146 (332)
..+.+...|+||+.+|..... ..+. ...+..|+.....+.+.+..+-.....+++++..... +
T Consensus 72 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~-------~-- 142 (249)
T PRK06500 72 QALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH-------I-- 142 (249)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc-------c--
Confidence 112235689999999875321 1122 3456777777777777666431112345555432221 1
Q ss_pred CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
+.|....++.++.-...+-+.+++.+. +..++
T Consensus 143 ~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~ 174 (249)
T PRK06500 143 GMPNSSVYAASKAALLSLAKTLSGELL--PRGIR 174 (249)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 222222344455444455555665542 33454
No 154
>PLN02253 xanthoxin dehydrogenase
Probab=97.74 E-value=0.00048 Score=62.79 Aligned_cols=150 Identities=16% Similarity=0.111 Sum_probs=81.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-CCccceEeeCChhhhc---
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEAC--- 79 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~~~~~~~~~~~~~~al--- 79 (332)
.+++.|+||+|.+|.+++..|+..|. +++++|+++ +..+....++.... . ....++.......+++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~-------~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGA-------KVCIVDLQD--DLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFT 88 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHH
Confidence 46899999999999999999998763 789999863 22222222221100 0 0000111111112222
Q ss_pred ----CCCcEEEEeCCCCCCC-----CCC---HHHHHHhhHHHHHH----HHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022 80 ----TGVNIAVMVGGFPRKE-----GME---RKDVMSKNVSIYKA----QASALEQHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~~-----~~~---r~~~~~~n~~i~~~----i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~ 143 (332)
...|++|+.||..... ..+ ....+..|+..... +.+.+.+.. .+.+++++.....
T Consensus 89 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~ii~isS~~~~------- 159 (280)
T PLN02253 89 VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK--KGSIVSLCSVASA------- 159 (280)
T ss_pred HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CceEEEecChhhc-------
Confidence 3689999999975321 112 23445667554444 344443322 3456666643221
Q ss_pred hCCCCCCCcEEEechHHHHHHHHHHHHHcCC
Q 020022 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNV 174 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v 174 (332)
+ +.+....++.++.-...+-+.+++.++-
T Consensus 160 ~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~ 188 (280)
T PLN02253 160 I--GGLGPHAYTGSKHAVLGLTRSVAAELGK 188 (280)
T ss_pred c--cCCCCcccHHHHHHHHHHHHHHHHHhhh
Confidence 1 1122224666777667777888887764
No 155
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00049 Score=61.60 Aligned_cols=155 Identities=14% Similarity=0.054 Sum_probs=81.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhhc-
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEAC- 79 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~al- 79 (332)
+.++|.|+||+|.+|+.++..|+..|. ++.++++++ +.++....++....... ...+.-..+..+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 76 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-------KVVVADRDA--AGGEETVALIREAGGEALFVACDVTRDAEVKALVE 76 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 357999999999999999999998763 789999874 33333333332211000 00000001112222
Q ss_pred ------CCCcEEEEeCCCCCCC----CCCHH---HHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022 80 ------TGVNIAVMVGGFPRKE----GMERK---DVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~~----~~~r~---~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~~~~~~~~~ 142 (332)
...|+||+.+|..... ..+.+ +.+..|+.-...+ .+.+.+.. ...++++|.....
T Consensus 77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~~sS~~~~------ 148 (253)
T PRK06172 77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG--GGAIVNTASVAGL------ 148 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEECchhhc------
Confidence 3459999999974321 22332 3455666544333 34443332 2456666653221
Q ss_pred HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+....++.+......+-+.+++.+. +.+++
T Consensus 149 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~ 181 (253)
T PRK06172 149 ---GAAPKMSIYAASKHAVIGLTKSAAIEYA--KKGIR 181 (253)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence 1122222345555544566667777663 45665
No 156
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.73 E-value=0.00028 Score=63.75 Aligned_cols=171 Identities=18% Similarity=0.196 Sum_probs=100.9
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC----CccceEeeCC----
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVATTD---- 74 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~----~~~~~~~~~~---- 74 (332)
++.+++.||||++.+|..+|..|+..|. .+.|+.++ +++|+..+.++++...- ...++....+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-------~liLvaR~--~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l 74 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-------NLILVARR--EDKLEALAKELEDKTGVEVEVIPADLSDPEALERL 74 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCc--HHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHH
Confidence 3557999999999999999999999874 79999998 47888888888764310 0011111111
Q ss_pred ---hhhhcCCCcEEEEeCCCCCCCC---C---CHHHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022 75 ---AVEACTGVNIAVMVGGFPRKEG---M---ERKDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 75 ---~~~al~~aDiVi~~ag~~~~~~---~---~r~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~ 141 (332)
+.+.....|+.|..||+..-.. . +..+.+.-|+ ...+.+.+.+.+.. . +.||+++.-...
T Consensus 75 ~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~-G~IiNI~S~ag~----- 147 (265)
T COG0300 75 EDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-A-GHIINIGSAAGL----- 147 (265)
T ss_pred HHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C-ceEEEEechhhc-----
Confidence 1122236899999999864321 1 2345666676 45556667776654 3 567787743321
Q ss_pred HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceeecCC
Q 020022 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVN 197 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~~~S 197 (332)
. +. |..-+++.|.---.-|...|...+ ....|+-.. +. .|...-..|.
T Consensus 148 --~-p~-p~~avY~ATKa~v~~fSeaL~~EL--~~~gV~V~~-v~-PG~~~T~f~~ 195 (265)
T COG0300 148 --I-PT-PYMAVYSATKAFVLSFSEALREEL--KGTGVKVTA-VC-PGPTRTEFFD 195 (265)
T ss_pred --C-CC-cchHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEE-Ee-cCcccccccc
Confidence 0 11 222244444444445555555555 456666332 23 3554445554
No 157
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00096 Score=59.71 Aligned_cols=155 Identities=14% Similarity=0.112 Sum_probs=79.0
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcC---CccceEeeCCh
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA 75 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~ 75 (332)
|++ +.++|.|+||+|++|++++..|+..|. ++.+. +++. +.++....++...... ...++....+.
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~-------~v~i~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i 71 (254)
T PRK12746 1 MKNLDGKVALVTGASRGIGRAIAMRLANDGA-------LVAIHYGRNK--QAADETIREIESNGGKAFLIEADLNSIDGV 71 (254)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCCH--HHHHHHHHHHHhcCCcEEEEEcCcCCHHHH
Confidence 554 347999999999999999999998763 56554 4432 2332222222211000 00011101111
Q ss_pred hhhc-------------CCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 76 VEAC-------------TGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 76 ~~al-------------~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
.+++ .+.|+||+++|...... .+. ...+..|+...-.+.+.+.++..+...++++|.....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~ 151 (254)
T PRK12746 72 KKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR 151 (254)
T ss_pred HHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc
Confidence 1111 25899999998753211 122 2344567776666666665543222356666543221
Q ss_pred hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.+.+..-.++.+..-...+-+.+++.++
T Consensus 152 ---------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~ 179 (254)
T PRK12746 152 ---------LGFTGSIAYGLSKGALNTMTLPLAKHLG 179 (254)
T ss_pred ---------CCCCCCcchHhhHHHHHHHHHHHHHHHh
Confidence 1122222345555554555556666654
No 158
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00052 Score=60.98 Aligned_cols=161 Identities=12% Similarity=0.119 Sum_probs=82.3
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhh
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE 77 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~ 77 (332)
|.-+.++|.|+||+|.+|++++..|+..|. ++.+...+. +...+....++...... ...++.-..+..+
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGF-------AVAVNYAGS-AAAADELVAEIEAAGGRAIAVQADVADAAAVTR 72 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCCC-HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 544567999999999999999999998764 566766543 22222222222211100 0001100111222
Q ss_pred hc-------CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022 78 AC-------TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 78 al-------~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~ 144 (332)
++ .+.|+||+.+|..... ..+ ....+..|+.....+.+.+.+...+..+++++|.....
T Consensus 73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-------- 144 (245)
T PRK12937 73 LFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA-------- 144 (245)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc--------
Confidence 22 3689999999975321 112 22345667665555555554432233466666642211
Q ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.|....++.++.--..+.+.+++.++ +..++
T Consensus 145 -~~~~~~~~Y~~sK~a~~~~~~~~a~~~~--~~~i~ 177 (245)
T PRK12937 145 -LPLPGYGPYAASKAAVEGLVHVLANELR--GRGIT 177 (245)
T ss_pred -CCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 1123222345555444455555666554 33454
No 159
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00043 Score=62.07 Aligned_cols=145 Identities=11% Similarity=0.088 Sum_probs=80.8
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh-----hHHHHhhhhcCCccceEeeCCh
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-----VKMELVDAAFPLLKGVVATTDA 75 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~-----~~~dl~~~~~~~~~~~~~~~~~ 75 (332)
|+.+.+++.|+||+|.+|++++..|+..|. ++.+.+++.. ....+ ...|+.+. .+.
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~-------~v~~~~r~~~-~~~~~~~~~~~~~D~~~~-----------~~~ 62 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGA-------TVVVCGRRAP-ETVDGRPAEFHAADVRDP-----------DQV 62 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCChh-hhhcCCceEEEEccCCCH-----------HHH
Confidence 445568999999999999999999998763 7889998742 10000 01111110 111
Q ss_pred hhh-------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhh---cCCCeEEEEecCcccchHH
Q 020022 76 VEA-------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVANPANTNAL 139 (332)
Q Consensus 76 ~~a-------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~---~~~~~~viv~tNP~~~~~~ 139 (332)
.++ +...|+||+.+|..... ..+ ....+..|+.....+.+.+..+ ......+|++|.-...
T Consensus 63 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~--- 139 (252)
T PRK07856 63 AALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR--- 139 (252)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC---
Confidence 222 24569999999864321 112 2344566666555555544332 1123567777653221
Q ss_pred HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.+.+....++.++.-...+.+.++..++
T Consensus 140 ------~~~~~~~~Y~~sK~a~~~l~~~la~e~~ 167 (252)
T PRK07856 140 ------RPSPGTAAYGAAKAGLLNLTRSLAVEWA 167 (252)
T ss_pred ------CCCCCCchhHHHHHHHHHHHHHHHHHhc
Confidence 1122222455555555667777777765
No 160
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.71 E-value=0.00048 Score=61.53 Aligned_cols=159 Identities=13% Similarity=0.085 Sum_probs=81.0
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc-
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC- 79 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al- 79 (332)
|..+.++|.|+||+|++|++++..|+..|. ++.+.+.+. .+.++....++.........++.-..+..+++
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~-------~vv~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 72 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGA-------RVVVNYHQS-EDAAEALADELGDRAIALQADVTDREQVQAMFA 72 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCC-------eEEEEcCCC-HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence 544557899999999999999999988763 566654432 12222111111100000000110001112222
Q ss_pred ------CC-CcEEEEeCCCCC-------C--CCCCHH---HHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcccc
Q 020022 80 ------TG-VNIAVMVGGFPR-------K--EGMERK---DVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 80 ------~~-aDiVi~~ag~~~-------~--~~~~r~---~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
.. .|++|+.+|... . ...+.+ +.+..|+.....+ .+.+.+.. .+.+++++.....
T Consensus 73 ~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~ 150 (253)
T PRK08642 73 TATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG--FGRIINIGTNLFQ 150 (253)
T ss_pred HHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC--CeEEEEECCcccc
Confidence 23 899999998631 1 112222 3455565544444 44443332 3567777653220
Q ss_pred hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
...++...++.++.....+-+.+++.++- ..|+
T Consensus 151 ---------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~--~~i~ 183 (253)
T PRK08642 151 ---------NPVVPYHDYTTAKAALLGLTRNLAAELGP--YGIT 183 (253)
T ss_pred ---------CCCCCccchHHHHHHHHHHHHHHHHHhCc--cCeE
Confidence 11122224666777777787888887653 4555
No 161
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00042 Score=62.97 Aligned_cols=160 Identities=13% Similarity=0.053 Sum_probs=84.2
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-----ccceEeeCChhh
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----LKGVVATTDAVE 77 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-----~~~~~~~~~~~~ 77 (332)
++.++|.|+||+|++|++++..|+..|. +|.++++++ +.++....++....... ..++....+...
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~ 75 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-------AVMIVGRNP--DKLAAAAEEIEALKGAGAVRYEPADVTDEDQVAR 75 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHH
Confidence 3458999999999999999999998764 789998864 33332323332110000 001100011112
Q ss_pred hc-------CCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHH
Q 020022 78 AC-------TGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALIL 141 (332)
Q Consensus 78 al-------~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~ 141 (332)
.+ ...|++|+.+|..... ..+. ...+..|......+.+.+.+.. .+...++++|....
T Consensus 76 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~------ 149 (276)
T PRK05875 76 AVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA------ 149 (276)
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh------
Confidence 22 3679999999864221 1222 2334556655555544433321 12346666664221
Q ss_pred HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCeeee
Q 020022 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNV 182 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~ 182 (332)
. .+.|..-.++.++.....+.+.+++.++ +..++..
T Consensus 150 -~--~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~ 185 (276)
T PRK05875 150 -S--NTHRWFGAYGVTKSAVDHLMKLAADELG--PSWVRVN 185 (276)
T ss_pred -c--CCCCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEEE
Confidence 0 1112222456666655666677777665 3566633
No 162
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.69 E-value=0.00028 Score=63.48 Aligned_cols=154 Identities=12% Similarity=0.102 Sum_probs=79.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhhhc-
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC- 79 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~al- 79 (332)
+.++|.|+||+|.+|..++..|+..|. .+.++++++..+.+ ...+.+.... ...++....+..+.+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 83 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-------DIIITTHGTNWDET---RRLIEKEGRKVTFVQVDLTKPESAEKVVK 83 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCcHHHHH---HHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 347899999999999999999998764 68888876321111 1112111100 000111011111222
Q ss_pred ------CCCcEEEEeCCCCCC-C--CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022 80 ------TGVNIAVMVGGFPRK-E--GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~-~--~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~ 143 (332)
...|++|+++|.... + ..+ .+..+..|+.. .+.+.+.+.+.. .+.++++|.....
T Consensus 84 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------- 154 (258)
T PRK06935 84 EALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG--SGKIINIASMLSF------- 154 (258)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC--CeEEEEECCHHhc-------
Confidence 367999999987532 1 122 22344556554 344444444433 3567777653321
Q ss_pred hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+..-.++.++.....+-+.+++.++ +.+|+
T Consensus 155 --~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~ 187 (258)
T PRK06935 155 --QGGKFVPAYTASKHGVAGLTKAFANELA--AYNIQ 187 (258)
T ss_pred --cCCCCchhhHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence 1111111344455555566677777665 34555
No 163
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00017 Score=73.94 Aligned_cols=116 Identities=17% Similarity=0.191 Sum_probs=68.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHh--cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEe-----eCChhh
Q 020022 6 VRVLVTGAAGQIGYALVPMIAR--GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVA-----TTDAVE 77 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~--~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~-----~~~~~~ 77 (332)
|||.|+||+|++|++++..|+. .+. +|++++++.....+......+.+... ....++.- .....+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~-------~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~ 73 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA-------TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIA 73 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC-------EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHH
Confidence 4899999999999999999984 321 78888886422222211100000000 00001100 011223
Q ss_pred hcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 78 ACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 78 al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
.++++|+||++|+... ...+..+....|+...+.+++.+.+...+ .++.+|
T Consensus 74 ~l~~~D~Vih~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~--~~v~~S 124 (657)
T PRK07201 74 ELGDIDHVVHLAAIYD-LTADEEAQRAANVDGTRNVVELAERLQAA--TFHHVS 124 (657)
T ss_pred HhcCCCEEEECceeec-CCCCHHHHHHHHhHHHHHHHHHHHhcCCC--eEEEEe
Confidence 3489999999998643 22344567788999999999998886432 455554
No 164
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00086 Score=60.09 Aligned_cols=123 Identities=17% Similarity=0.121 Sum_probs=68.6
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCCh--
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA-- 75 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~-- 75 (332)
|-+..++|.|+||+|++|++++..|+..|. +|.++|+++ +.++....++...... ...++......
T Consensus 1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (258)
T PRK07890 1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGA-------DVVLAARTA--ERLDEVAAEIDDLGRRALAVPTDITDEDQCAN 71 (258)
T ss_pred CccCCCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHhCCceEEEecCCCCHHHHHH
Confidence 445667999999999999999999998774 789999874 3333333333211100 00011100111
Q ss_pred -----hhhcCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHHHhhcC-CCeEEEEecC
Q 020022 76 -----VEACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAA-PNCKVLVVAN 132 (332)
Q Consensus 76 -----~~al~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~-~~~~viv~tN 132 (332)
.+.+...|+||+.+|.... + ..+. ...+..|+.....+.+.+.++-. ....+|++|.
T Consensus 72 ~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS 141 (258)
T PRK07890 72 LVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS 141 (258)
T ss_pred HHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 1223468999999987432 1 2222 33456666655555555544311 1135666664
No 165
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.0042 Score=56.21 Aligned_cols=154 Identities=14% Similarity=0.197 Sum_probs=83.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc----cceEeeCChhhh--
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL----KGVVATTDAVEA-- 78 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~----~~~~~~~~~~~a-- 78 (332)
.+.+.|+||+|.+|.+++..|+..|. +|.++|++. +.++....++........ .++.-..+..+.
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~ 78 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARAGA-------DVILLSRNE--ENLKKAREKIKSESNVDVSYIVADLTKREDLERTVK 78 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence 46789999999999999999998874 789999874 344333333322110000 011101111122
Q ss_pred ----cCCCcEEEEeCCCCCCC---CCCHH---HHHHhh----HHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022 79 ----CTGVNIAVMVGGFPRKE---GMERK---DVMSKN----VSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 79 ----l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n----~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~ 144 (332)
+...|++|+.+|..... ..+.+ ..+..| ...++.+.+.+++.. .+.||++|.....
T Consensus 79 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~--~g~Ii~isS~~~~-------- 148 (263)
T PRK08339 79 ELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG--FGRIIYSTSVAIK-------- 148 (263)
T ss_pred HHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CCEEEEEcCcccc--------
Confidence 23579999999875321 12333 334444 445677777776643 3567777653321
Q ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.|..-.++.+.---..+-+.+++.+. +..|+
T Consensus 149 -~~~~~~~~y~asKaal~~l~~~la~el~--~~gIr 181 (263)
T PRK08339 149 -EPIPNIALSNVVRISMAGLVRTLAKELG--PKGIT 181 (263)
T ss_pred -CCCCcchhhHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence 1112111233344444566667777665 45565
No 166
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.0012 Score=60.22 Aligned_cols=163 Identities=17% Similarity=0.144 Sum_probs=86.4
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh-----hhhhhHHHHhhhhcCC---ccceEee
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-----ALNGVKMELVDAAFPL---LKGVVAT 72 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-----~l~~~~~dl~~~~~~~---~~~~~~~ 72 (332)
|.++.+++.|+||+|++|++++..|+..|. ++++++++.... .++....++....... ..++...
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~ 74 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGA-------NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDE 74 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCH
Confidence 334457899999999999999999998764 788888864211 1111222222110000 0011111
Q ss_pred CChhhh-------cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccch
Q 020022 73 TDAVEA-------CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTN 137 (332)
Q Consensus 73 ~~~~~a-------l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~ 137 (332)
.+..+. +...|+||+++|..... ..+.+ ..+..|+.-...+.+.+..+- ...+.++++|.+...
T Consensus 75 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~- 153 (273)
T PRK08278 75 DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL- 153 (273)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc-
Confidence 111122 23679999999974321 22322 334556554444444443221 123566666643321
Q ss_pred HHHHHHhCCC-CCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 138 ALILKEFAPS-IPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 138 ~~~~~~~~~~-~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
. +. ++....++.++.-..++...+++.++ +.+|+
T Consensus 154 ------~-~~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~ 188 (273)
T PRK08278 154 ------D-PKWFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIA 188 (273)
T ss_pred ------c-ccccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence 0 11 13233567777777788888888876 34565
No 167
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.69 E-value=0.00031 Score=65.39 Aligned_cols=80 Identities=11% Similarity=0.184 Sum_probs=57.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
..|||+|+| +|.+|++++..|...|. +|.++|+++. .+..++++++|
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~-------~V~~~~r~~~-------------------------~~~~~~~~~ad 49 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLASANGH-------RVRVWSRRSG-------------------------LSLAAVLADAD 49 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCC-------EEEEEeCCCC-------------------------CCHHHHHhcCC
Confidence 357999999 79999999999998763 7999998631 23557788999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-cCCCeEEEEecC
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH-AAPNCKVLVVAN 132 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~~viv~tN 132 (332)
+||++.- .+.++++++.+..+ ..++++++..|+
T Consensus 50 vvi~~vp----------------~~~~~~v~~~l~~~~~~~~~ivi~~s~ 83 (308)
T PRK14619 50 VIVSAVS----------------MKGVRPVAEQVQALNLPPETIIVTATK 83 (308)
T ss_pred EEEEECC----------------hHHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 9999841 02344555666543 235666766676
No 168
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.00059 Score=62.04 Aligned_cols=143 Identities=13% Similarity=0.117 Sum_probs=76.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh-----
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV----- 76 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~----- 76 (332)
++|.|+||+|++|++++..|+..|. .+.+.++++ +.+.. +.........-+... ++ ..
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-------~v~~~~r~~--~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 69 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-------RVAATVRRP--DALDD----LKARYGDRLWVLQLDVTDSAAVRAVVDR 69 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHH----HHHhccCceEEEEccCCCHHHHHHHHHH
Confidence 5799999999999999999998763 688888763 22221 111100000000110 11 11
Q ss_pred --hhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcccchHHHHHHh
Q 020022 77 --EACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 77 --~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~~~~~~~~~~~ 144 (332)
+.+.+.|+||+++|...... .+ ....+..|+.....+.+.+ ++.. . .++|++|.-...
T Consensus 70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~-~~iv~~sS~~~~-------- 139 (276)
T PRK06482 70 AFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-G-GRIVQVSSEGGQ-------- 139 (276)
T ss_pred HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-CEEEEEcCcccc--------
Confidence 12346799999999754221 12 2345567777666666665 4333 2 456666542110
Q ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHc
Q 020022 145 APSIPAKNITCLTRLDHNRALGQISEKL 172 (332)
Q Consensus 145 ~~~~~~~~i~~~t~lds~r~~~~la~~l 172 (332)
.+.|....++.++.-...+...+++.+
T Consensus 140 -~~~~~~~~Y~~sK~a~~~~~~~l~~~~ 166 (276)
T PRK06482 140 -IAYPGFSLYHATKWGIEGFVEAVAQEV 166 (276)
T ss_pred -cCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 122322245555554455555666654
No 169
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00067 Score=60.50 Aligned_cols=153 Identities=22% Similarity=0.203 Sum_probs=80.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CCh-------
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDA------- 75 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~------- 75 (332)
+.+++.|+||+|++|.+++..|+..|. ++.++|+++ +.+.....++.+.... ...+... ++.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~ 74 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-------SVVVADINA--EGAERVAKQIVADGGT-AIAVQVDVSDPDSAKAMA 74 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-EEEEEcCCCCHHHHHHHH
Confidence 457899999999999999999998763 789999874 2232222222211100 0011111 111
Q ss_pred ---hhhcCCCcEEEEeCCCCCC----C--CCCHH---HHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHH
Q 020022 76 ---VEACTGVNIAVMVGGFPRK----E--GMERK---DVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALIL 141 (332)
Q Consensus 76 ---~~al~~aDiVi~~ag~~~~----~--~~~r~---~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~ 141 (332)
.+.+...|+||+++|.... + ..+.. ..+..|......+.+.+..+. .+...++++|.-..
T Consensus 75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~------ 148 (250)
T PRK07774 75 DATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA------ 148 (250)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc------
Confidence 1122468999999997421 1 12222 335566655555555544431 11346666663211
Q ss_pred HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
+++...++.+......+.+.+++.+. ..+|+
T Consensus 149 ------~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~ 179 (250)
T PRK07774 149 ------WLYSNFYGLAKVGLNGLTQQLARELG--GMNIR 179 (250)
T ss_pred ------cCCccccHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence 11112344455544556666666654 33555
No 170
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.66 E-value=0.00031 Score=65.92 Aligned_cols=96 Identities=23% Similarity=0.313 Sum_probs=63.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhc-ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARG-VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~-~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
.++|+|+||+|++|+.++..|+.. +. . ++.++++++ +++.....++.+.. . .+..+++.++|
T Consensus 155 ~k~VLVtGAtG~IGs~lar~L~~~~gv-~-----~lilv~R~~--~rl~~La~el~~~~--------i-~~l~~~l~~aD 217 (340)
T PRK14982 155 KATVAVVGATGDIGSAVCRWLDAKTGV-A-----ELLLVARQQ--ERLQELQAELGGGK--------I-LSLEEALPEAD 217 (340)
T ss_pred CCEEEEEccChHHHHHHHHHHHhhCCC-C-----EEEEEcCCH--HHHHHHHHHhcccc--------H-HhHHHHHccCC
Confidence 479999998899999999999753 32 2 789998863 44543333332111 1 24668899999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
+||++++.+...-.+..++ . +..+++=++.|=|+
T Consensus 218 iVv~~ts~~~~~~I~~~~l------------------~-~~~~viDiAvPRDV 251 (340)
T PRK14982 218 IVVWVASMPKGVEIDPETL------------------K-KPCLMIDGGYPKNL 251 (340)
T ss_pred EEEECCcCCcCCcCCHHHh------------------C-CCeEEEEecCCCCC
Confidence 9999998764211222211 2 34777778888774
No 171
>PRK08264 short chain dehydrogenase; Validated
Probab=97.65 E-value=0.00029 Score=62.49 Aligned_cols=151 Identities=21% Similarity=0.148 Sum_probs=77.8
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh---
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE--- 77 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~--- 77 (332)
|+...++|.|+||+|.+|++++..|+..|. . ++.++++++ +.+.. ..........++.-..+..+
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~-~-----~V~~~~r~~--~~~~~----~~~~~~~~~~D~~~~~~~~~~~~ 69 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGA-A-----KVYAAARDP--ESVTD----LGPRVVPLQLDVTDPASVAAAAE 69 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCc-c-----cEEEEecCh--hhhhh----cCCceEEEEecCCCHHHHHHHHH
Confidence 444567999999999999999999998763 1 588888864 22221 00000000000000011122
Q ss_pred hcCCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHHHHhCCCC
Q 020022 78 ACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 78 al~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~~~~~~~~ 148 (332)
.+...|+||+++|..... ..+. .+.+..|......+.+.+.... .+...++++|..... .+.
T Consensus 70 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~---------~~~ 140 (238)
T PRK08264 70 AASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW---------VNF 140 (238)
T ss_pred hcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc---------cCC
Confidence 233589999999973211 1222 2334566655555555443221 123456667653321 122
Q ss_pred CCCcEEEechHHHHHHHHHHHHHc
Q 020022 149 PAKNITCLTRLDHNRALGQISEKL 172 (332)
Q Consensus 149 ~~~~i~~~t~lds~r~~~~la~~l 172 (332)
+....++.+..-...+...+++.+
T Consensus 141 ~~~~~y~~sK~a~~~~~~~l~~~~ 164 (238)
T PRK08264 141 PNLGTYSASKAAAWSLTQALRAEL 164 (238)
T ss_pred CCchHhHHHHHHHHHHHHHHHHHh
Confidence 222234445554455556666655
No 172
>PRK06128 oxidoreductase; Provisional
Probab=97.65 E-value=0.00093 Score=61.75 Aligned_cols=153 Identities=15% Similarity=0.103 Sum_probs=82.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCCh------
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDA------ 75 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~------ 75 (332)
.++|.|+||+|.+|.+++..|+..|. ++.+.+++.+...++.....+....... ..++....+.
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~-------~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 127 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGA-------DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVER 127 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCC-------EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHH
Confidence 36899999999999999999998764 6777766432222222222222211000 0011100111
Q ss_pred -hhhcCCCcEEEEeCCCCCCC----CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022 76 -VEACTGVNIAVMVGGFPRKE----GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 76 -~~al~~aDiVi~~ag~~~~~----~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~ 147 (332)
.+.+...|++|+.||..... ..+ ....+..|+...-.+++.+..+..+...+|++|.-... .+
T Consensus 128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~---------~~ 198 (300)
T PRK06128 128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSY---------QP 198 (300)
T ss_pred HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcccc---------CC
Confidence 12234689999999974211 122 34456778876767777766553344567666643221 11
Q ss_pred CCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 148 IPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 148 ~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.+..-.++.++.-...+-+.+++.+.
T Consensus 199 ~~~~~~Y~asK~a~~~~~~~la~el~ 224 (300)
T PRK06128 199 SPTLLDYASTKAAIVAFTKALAKQVA 224 (300)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhh
Confidence 11111245555555566666777653
No 173
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00076 Score=60.46 Aligned_cols=159 Identities=14% Similarity=0.130 Sum_probs=87.7
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhh
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVE 77 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~ 77 (332)
|+.+.+++.|+||+|.+|.+++..|+..|. ++.+.++++ +.++....++.+..... ..++....+..+
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 72 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGA-------KVVVGARRQ--AELDQLVAEIRAEGGEAVALAGDVRDEAYAKA 72 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 333457899999999999999999998764 789999874 34433333333211000 001100001111
Q ss_pred -------hcCCCcEEEEeCCCCC--CC--CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022 78 -------ACTGVNIAVMVGGFPR--KE--GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNAL 139 (332)
Q Consensus 78 -------al~~aDiVi~~ag~~~--~~--~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~ 139 (332)
.+...|++|+.||... .+ ..+. ...+..|+. ..+.+.+.+.+.. ...++++|.....
T Consensus 73 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~--~~~iv~~sS~~~~--- 147 (254)
T PRK07478 73 LVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG--GGSLIFTSTFVGH--- 147 (254)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CceEEEEechHhh---
Confidence 1236899999999742 12 2222 344566764 5555566665543 3456666643211
Q ss_pred HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
. .+.+....++.++.-...+-..+++.++ +..|+
T Consensus 148 ---~--~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~ 181 (254)
T PRK07478 148 ---T--AGFPGMAAYAASKAGLIGLTQVLAAEYG--AQGIR 181 (254)
T ss_pred ---c--cCCCCcchhHHHHHHHHHHHHHHHHHHh--hcCEE
Confidence 0 1223223456666666677777777765 34555
No 174
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.65 E-value=0.0003 Score=65.04 Aligned_cols=165 Identities=14% Similarity=0.130 Sum_probs=88.1
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh----cCCCc
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA----CTGVN 83 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a----l~~aD 83 (332)
|.|+||+|++|++++..|+..+. . ++.++|.......+. .+... .....+......... +.++|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~-~-----~v~~~~~~~~~~~~~----~~~~~--~~~~d~~~~~~~~~~~~~~~~~~D 68 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI-T-----DILVVDNLRDGHKFL----NLADL--VIADYIDKEDFLDRLEKGAFGKIE 68 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC-c-----eEEEEecCCCchhhh----hhhhe--eeeccCcchhHHHHHHhhccCCCC
Confidence 67999999999999999998763 1 577777653211111 11100 000011111112221 25899
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH---HHHHhCCCCCCCcEEEechHH
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL---ILKEFAPSIPAKNITCLTRLD 160 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~---~~~~~~~~~~~~~i~~~t~ld 160 (332)
+||++|+.......+....+..|+.....+.+.+.+.. ..+|++|.. .+... ...+..+-..+...++.+...
T Consensus 69 ~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---~~~v~~SS~-~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~ 144 (314)
T TIGR02197 69 AIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG---IPFIYASSA-ATYGDGEAGFREGRELERPLNVYGYSKFL 144 (314)
T ss_pred EEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC---CcEEEEccH-HhcCCCCCCcccccCcCCCCCHHHHHHHH
Confidence 99999986543333455677889999999999988764 246666642 11000 000000000122234555555
Q ss_pred HHHHHHH-HHH-HcCCCCCCeeeeEEEecc
Q 020022 161 HNRALGQ-ISE-KLNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 161 s~r~~~~-la~-~l~v~~~~v~~~~v~G~h 188 (332)
...+... .++ ..+++...++...|+|..
T Consensus 145 ~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~ 174 (314)
T TIGR02197 145 FDQYVRRRVLPEALSAQVVGLRYFNVYGPR 174 (314)
T ss_pred HHHHHHHHhHhhccCCceEEEEEeeccCCC
Confidence 4444322 222 335566667777778864
No 175
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00084 Score=59.89 Aligned_cols=150 Identities=16% Similarity=0.093 Sum_probs=78.7
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chh
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAV 76 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~ 76 (332)
|..+.+++.|+||+|.+|++++..|+..|. ++.+++++. +.+.....++. .. ....-+... + ...
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~ 69 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGA-------RVVVADRDA--EAAERVAAAIA-AG-GRAFARQGDVGSAEAVE 69 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCC-------eEEEecCCH--HHHHHHHHHHh-cC-CeEEEEEcCCCCHHHHH
Confidence 655667999999999999999999998763 688998774 22322222221 00 000001111 1 111
Q ss_pred hh-------cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022 77 EA-------CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNAL 139 (332)
Q Consensus 77 ~a-------l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~ 139 (332)
++ +.+.|+||+.+|..... ..+.+ ..+..|.... +.+.+.+++.. ...++++|.-...
T Consensus 70 ~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~~sS~~~~--- 144 (252)
T PRK06138 70 ALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG--GGSIVNTASQLAL--- 144 (252)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC--CeEEEEECChhhc---
Confidence 22 24789999999975321 12222 2355666544 34444444443 2456666642221
Q ss_pred HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHc
Q 020022 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKL 172 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l 172 (332)
.+.+....++.+..-...+...+++.+
T Consensus 145 ------~~~~~~~~Y~~sK~a~~~~~~~l~~~~ 171 (252)
T PRK06138 145 ------AGGRGRAAYVASKGAIASLTRAMALDH 171 (252)
T ss_pred ------cCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 112222234444444455666666655
No 176
>PRK07069 short chain dehydrogenase; Validated
Probab=97.64 E-value=0.00075 Score=60.15 Aligned_cols=155 Identities=23% Similarity=0.234 Sum_probs=85.1
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEee-CC---h------
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVAT-TD---A------ 75 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~-~~---~------ 75 (332)
||.|+||+|++|.+++..|+..|. ++++.+++. .+.++....++...... ....+... ++ .
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 72 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-------KVFLTDIND-AAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQ 72 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCc-chHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHH
Confidence 489999999999999999998763 789998862 23333333333221100 00001110 11 1
Q ss_pred -hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022 76 -VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 76 -~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~ 144 (332)
.+.+...|+||+.+|..... ..+. ...+..|+. ..+.+.+.+++.. . ..++++|.....
T Consensus 73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-~~ii~~ss~~~~-------- 142 (251)
T PRK07069 73 AADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-P-ASIVNISSVAAF-------- 142 (251)
T ss_pred HHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-C-cEEEEecChhhc--------
Confidence 12235689999999875421 1122 234566766 7778888887654 3 456666643321
Q ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+..-.++.+......+.+.+++.+.-....++
T Consensus 143 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~ 177 (251)
T PRK07069 143 -KAEPDYTAYNASKAAVASLTKSIALDCARRGLDVR 177 (251)
T ss_pred -cCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEE
Confidence 11121113455555445666667776654333454
No 177
>PRK12320 hypothetical protein; Provisional
Probab=97.63 E-value=0.00021 Score=73.15 Aligned_cols=101 Identities=13% Similarity=0.151 Sum_probs=64.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||.|+||+||+|++++..|+..|. +|..+|..+. .......++.. .++... ...+++.++|+|
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~-------~Vi~ldr~~~--~~~~~~ve~v~------~Dl~d~-~l~~al~~~D~V 64 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH-------TVSGIAQHPH--DALDPRVDYVC------ASLRNP-VLQELAGEADAV 64 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-------EEEEEeCChh--hcccCCceEEE------ccCCCH-HHHHHhcCCCEE
Confidence 4899999999999999999988763 7888987531 11000000000 011111 234567899999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
|++++... .. -...|+....++++.+++.. +++|++|
T Consensus 65 IHLAa~~~--~~----~~~vNv~Gt~nLleAA~~~G---vRiV~~S 101 (699)
T PRK12320 65 IHLAPVDT--SA----PGGVGITGLAHVANAAARAG---ARLLFVS 101 (699)
T ss_pred EEcCccCc--cc----hhhHHHHHHHHHHHHHHHcC---CeEEEEE
Confidence 99997531 11 12468888889998887764 3555555
No 178
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.63 E-value=0.00048 Score=66.44 Aligned_cols=104 Identities=16% Similarity=0.154 Sum_probs=61.2
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe--e--CChhhh
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA--T--TDAVEA 78 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~--~--~~~~~a 78 (332)
.+.++|.|+||+|.+|++++..|+..|. ++.++++++ +.+... +.+.... ...+.. + .+..+.
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~-------~Vi~l~r~~--~~l~~~---~~~~~~~-v~~v~~Dvsd~~~v~~~ 242 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGA-------KVVALTSNS--DKITLE---INGEDLP-VKTLHWQVGQEAALAEL 242 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHH---HhhcCCC-eEEEEeeCCCHHHHHHH
Confidence 3457899999999999999999998763 688888764 222211 1111000 001111 1 123345
Q ss_pred cCCCcEEEEeCCCCCCCCCCH---HHHHHhhHHH----HHHHHHHHHh
Q 020022 79 CTGVNIAVMVGGFPRKEGMER---KDVMSKNVSI----YKAQASALEQ 119 (332)
Q Consensus 79 l~~aDiVi~~ag~~~~~~~~r---~~~~~~n~~i----~~~i~~~i~~ 119 (332)
+.+.|++|+.||.......+. .+.+..|... ++.+.+.+++
T Consensus 243 l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~ 290 (406)
T PRK07424 243 LEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKT 290 (406)
T ss_pred hCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 678999999998754333333 3445666654 4444555544
No 179
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.63 E-value=0.00045 Score=65.71 Aligned_cols=78 Identities=18% Similarity=0.238 Sum_probs=49.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCCc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~aD 83 (332)
++||.||| +|+||+.++..|++.+. + +|++.|++. +++... .+..+... ...-.+.....+.+.+++.|
T Consensus 1 m~~ilviG-aG~Vg~~va~~la~~~d-~-----~V~iAdRs~--~~~~~i-~~~~~~~v~~~~vD~~d~~al~~li~~~d 70 (389)
T COG1748 1 MMKILVIG-AGGVGSVVAHKLAQNGD-G-----EVTIADRSK--EKCARI-AELIGGKVEALQVDAADVDALVALIKDFD 70 (389)
T ss_pred CCcEEEEC-CchhHHHHHHHHHhCCC-c-----eEEEEeCCH--HHHHHH-HhhccccceeEEecccChHHHHHHHhcCC
Confidence 46899999 59999999999998764 2 899999983 333322 11111100 00011111234678899999
Q ss_pred EEEEeCCCC
Q 020022 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.++...
T Consensus 71 ~VIn~~p~~ 79 (389)
T COG1748 71 LVINAAPPF 79 (389)
T ss_pred EEEEeCCch
Confidence 999997543
No 180
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00039 Score=62.95 Aligned_cols=151 Identities=13% Similarity=0.120 Sum_probs=78.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh---
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA--- 78 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a--- 78 (332)
.++|.|+||+|.+|++++..|+..|. +|.++|++. +.+.....++....... ..++....+..++
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~ 79 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGA-------NVAVASRSQ--EKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQ 79 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHH
Confidence 46999999999999999999998763 789999874 33332222332211000 0011111111222
Q ss_pred ----cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecCcccchHHHHHHhCCC
Q 020022 79 ----CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 79 ----l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tNP~~~~~~~~~~~~~~ 147 (332)
+...|++|+.+|..... ..+.+ ..+..|......+.+.+...- .+++.++++|.+.... +
T Consensus 80 ~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~---------~ 150 (264)
T PRK07576 80 IADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV---------P 150 (264)
T ss_pred HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc---------C
Confidence 24579999998754211 12222 334566655455544443321 1234677777643310 1
Q ss_pred CCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 148 IPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 148 ~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.+....++.++.-..++-+.++..+.
T Consensus 151 ~~~~~~Y~asK~a~~~l~~~la~e~~ 176 (264)
T PRK07576 151 MPMQAHVCAAKAGVDMLTRTLALEWG 176 (264)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 12122344445444566666666654
No 181
>PRK08643 acetoin reductase; Validated
Probab=97.61 E-value=0.0019 Score=57.85 Aligned_cols=154 Identities=17% Similarity=0.206 Sum_probs=81.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCC-------h
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTD-------A 75 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~-------~ 75 (332)
+++.|+||+|++|.+++..|+..|. +++++|++. +.+.....++.+.... ...++..... .
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 73 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF-------KVAIVDYNE--ETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQV 73 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4789999999999999999998764 789999874 3333333333321100 0001110001 1
Q ss_pred hhhcCCCcEEEEeCCCCCC-C--CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022 76 VEACTGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~-~--~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~ 145 (332)
.+.+.+.|+||+++|.... + ..+. ...+..|+.. .+.+.+.+.+.. +++.++++|.....
T Consensus 74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~--------- 143 (256)
T PRK08643 74 VDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLG-HGGKIINATSQAGV--------- 143 (256)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCCEEEEECccccc---------
Confidence 1223468999999987432 1 1122 2344556643 334444444433 23567777653321
Q ss_pred CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.|....++.++.-...+.+.+++.+ .+..|+
T Consensus 144 ~~~~~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~ 176 (256)
T PRK08643 144 VGNPELAVYSSTKFAVRGLTQTAARDL--ASEGIT 176 (256)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHh--cccCcE
Confidence 112222235555555455666666655 345555
No 182
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.001 Score=60.68 Aligned_cols=122 Identities=18% Similarity=0.147 Sum_probs=66.9
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChh
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV 76 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~ 76 (332)
|.. +.+.+.|+||+|.+|++++..|+..|. ++.+.|+++ +.++....++...... ...++....+..
T Consensus 1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~-------~Vv~~~r~~--~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~ 71 (275)
T PRK05876 1 MDGFPGRGAVITGGASGIGLATGTEFARRGA-------RVVLGDVDK--PGLRQAVNHLRAEGFDVHGVMCDVRHREEVT 71 (275)
T ss_pred CCCcCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 543 346799999999999999999998774 789999874 3343333333221100 000111111111
Q ss_pred h-------hcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecC
Q 020022 77 E-------ACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 77 ~-------al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tN 132 (332)
+ .+...|++|+.||..... ..+.+ ..+..|+... +.+.+.+.+... .+.++++|.
T Consensus 72 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~-~g~iv~isS 143 (275)
T PRK05876 72 HLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT-GGHVVFTAS 143 (275)
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-CCEEEEeCC
Confidence 1 223579999999974311 12322 3355665444 444444444432 345666664
No 183
>PRK07680 late competence protein ComER; Validated
Probab=97.60 E-value=0.00069 Score=61.90 Aligned_cols=100 Identities=12% Similarity=0.212 Sum_probs=62.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||+||| +|.+|++++..|...+.+. +.++.++|+++ +.++. +.+. . ..+....+..++++++|+|
T Consensus 1 m~I~iIG-~G~mG~ala~~L~~~g~~~---~~~v~v~~r~~--~~~~~----~~~~-~---~g~~~~~~~~~~~~~aDiV 66 (273)
T PRK07680 1 MNIGFIG-TGNMGTILIEAFLESGAVK---PSQLTITNRTP--AKAYH----IKER-Y---PGIHVAKTIEEVISQSDLI 66 (273)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCH--HHHHH----HHHH-c---CCeEEECCHHHHHHhCCEE
Confidence 4799999 6999999999998876322 11689999874 33321 2211 0 1234455667778999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~ 135 (332)
|++.- + ..++++.+.+..+-.++..|+.+++++.
T Consensus 67 ilav~----p------------~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 67 FICVK----P------------LDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred EEecC----H------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 99851 1 1123444444444334566777888764
No 184
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.0013 Score=59.36 Aligned_cols=121 Identities=25% Similarity=0.287 Sum_probs=67.6
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CChh---
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDAV--- 76 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~~--- 76 (332)
|.++.++|.|+||+|.+|..++..|+..|. +|.++++++ +.++....++.... ...-+... ++..
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~--~~~~~~~D~~d~~~~~ 69 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGA-------RLLLVGRNA--EKLEALAARLPYPG--RHRWVVADLTSEAGRE 69 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHhcCC--ceEEEEccCCCHHHHH
Confidence 666778999999999999999999998763 789999874 33332222221100 00000000 1111
Q ss_pred ------hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecC
Q 020022 77 ------EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVAN 132 (332)
Q Consensus 77 ------~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tN 132 (332)
+.+...|+||+++|..... ..+. .+.+..|+.....+.+.+..+. .+...+++++.
T Consensus 70 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS 139 (263)
T PRK09072 70 AVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS 139 (263)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 1135689999999975321 1122 2345667665555555543321 11245666655
No 185
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.59 E-value=0.00026 Score=68.13 Aligned_cols=114 Identities=19% Similarity=0.166 Sum_probs=66.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhh--HHHHhhhhcCCcc----ceEeeCChhh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV--KMELVDAAFPLLK----GVVATTDAVE 77 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~--~~dl~~~~~~~~~----~~~~~~~~~~ 77 (332)
+.+||.|+||+|++|++++..|+..|. +|++++++.. ..... ..++... .+... ++.-.....+
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~-------~V~~l~R~~~--~~~~~~~~~~~~~~-~~~v~~v~~Dl~d~~~l~~ 128 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGY-------NVVAVAREKS--GIRGKNGKEDTKKE-LPGAEVVFGDVTDADSLRK 128 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEEechh--hccccchhhHHhhh-cCCceEEEeeCCCHHHHHH
Confidence 347999999999999999999998763 7888887642 11110 0111100 00000 1111112344
Q ss_pred hcC----CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 78 ACT----GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 78 al~----~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
+++ ++|+||++++.+.... .+....|....+++.+.+++... .+++++|+
T Consensus 129 ~~~~~~~~~D~Vi~~aa~~~~~~---~~~~~vn~~~~~~ll~aa~~~gv--~r~V~iSS 182 (390)
T PLN02657 129 VLFSEGDPVDVVVSCLASRTGGV---KDSWKIDYQATKNSLDAGREVGA--KHFVLLSA 182 (390)
T ss_pred HHHHhCCCCcEEEECCccCCCCC---ccchhhHHHHHHHHHHHHHHcCC--CEEEEEee
Confidence 555 5899999877432111 12345677778888888887653 24666654
No 186
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.59 E-value=0.00043 Score=61.63 Aligned_cols=121 Identities=19% Similarity=0.115 Sum_probs=65.7
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV 76 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~ 76 (332)
|++ +.++|.|+||+|++|.+++..|+..|. +|.+++++. +.+.....++....... ..++....+..
T Consensus 1 ~~~~~~~~ilItGasg~iG~~l~~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~ 71 (251)
T PRK12826 1 TRDLEGRVALVTGAARGIGRAIAVRLAADGA-------EVIVVDICG--DDAAATAELVEAAGGKARARQVDVRDRAALK 71 (251)
T ss_pred CCCCCCCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 444 357899999999999999999998763 788998874 23322222232111000 00110011111
Q ss_pred hh-------cCCCcEEEEeCCCCCC-C--CCCH---HHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecC
Q 020022 77 EA-------CTGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVAN 132 (332)
Q Consensus 77 ~a-------l~~aDiVi~~ag~~~~-~--~~~r---~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tN 132 (332)
+. +..+|+||+++|.... + ..+. .+.+..|+.....+.+.+ .+.. + .+++++|.
T Consensus 72 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~-~~ii~~ss 142 (251)
T PRK12826 72 AAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-G-GRIVLTSS 142 (251)
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C-cEEEEEec
Confidence 22 2368999999987532 1 2222 234556665555554444 4433 2 45666654
No 187
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.58 E-value=0.001 Score=59.00 Aligned_cols=39 Identities=31% Similarity=0.384 Sum_probs=31.7
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPP 46 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~ 46 (332)
|..++++|.|+||+|++|+.++..|+..|. ++++. ++++
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~-------~v~~~~~r~~ 40 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGA-------KVVIAYDINE 40 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEcCCCH
Confidence 555667999999999999999999988763 56666 8764
No 188
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.58 E-value=0.00063 Score=60.87 Aligned_cols=118 Identities=20% Similarity=0.205 Sum_probs=66.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhh---
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE--- 77 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~--- 77 (332)
..++|.|+||+|++|++++..|+..|. ++.++++++ +.+.....++...... ...++....+..+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 73 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-------KVVIADLND--EAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGID 73 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 346899999999999999999998763 789999874 3333333333211100 0001111111112
Q ss_pred ----hcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022 78 ----ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 78 ----al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+.+.|+||+++|...... .+ .++.+..|+.. ++.+.+.+++.. . .+++++|.
T Consensus 74 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~-~~iv~iss 140 (258)
T PRK12429 74 YAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-G-GRIINMAS 140 (258)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-C-eEEEEEcc
Confidence 2346899999998643211 12 12334455554 666666666554 2 45666664
No 189
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.58 E-value=0.00048 Score=62.16 Aligned_cols=149 Identities=17% Similarity=0.166 Sum_probs=78.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV------- 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~------- 76 (332)
+.+++.|+||+|.+|.+++..|+..|. +|.++|+++ +.++....++.........++....+..
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-------RVAVLERSA--EKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTV 75 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHH
Confidence 457999999999999999999998764 789999874 3333222221100000000110000111
Q ss_pred hhcCCCcEEEEeCCCCCC--C--CCCHH-------HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022 77 EACTGVNIAVMVGGFPRK--E--GMERK-------DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 77 ~al~~aDiVi~~ag~~~~--~--~~~r~-------~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~ 141 (332)
+.+...|++|+.+|.... + ..+.+ ..+..|+.. ++.+.+.+++. .+.+|+++.-...
T Consensus 76 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~----- 147 (263)
T PRK06200 76 DAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS---GGSMIFTLSNSSF----- 147 (263)
T ss_pred HhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc---CCEEEEECChhhc-----
Confidence 223468999999997431 1 22222 233445443 44444444332 2455555532210
Q ss_pred HHhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
. ..+....++.++.-...+-+.+++.++
T Consensus 148 --~--~~~~~~~Y~~sK~a~~~~~~~la~el~ 175 (263)
T PRK06200 148 --Y--PGGGGPLYTASKHAVVGLVRQLAYELA 175 (263)
T ss_pred --C--CCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 0 112122456666666677777888775
No 190
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.58 E-value=0.00097 Score=61.16 Aligned_cols=72 Identities=21% Similarity=0.218 Sum_probs=47.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
..|||+||| +|.+|++++..|+..+... +.++..+|++. +++++ ++... . .+....+..+++++||
T Consensus 2 ~~mkI~~IG-~G~mG~aia~~l~~~g~~~---~~~v~v~~r~~-~~~~~----~l~~~---~--g~~~~~~~~e~~~~aD 67 (279)
T PRK07679 2 SIQNISFLG-AGSIAEAIIGGLLHANVVK---GEQITVSNRSN-ETRLQ----ELHQK---Y--GVKGTHNKKELLTDAN 67 (279)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCC-HHHHH----HHHHh---c--CceEeCCHHHHHhcCC
Confidence 346999999 7999999999999876321 12688898753 12222 22211 0 1234456667789999
Q ss_pred EEEEeC
Q 020022 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+||++.
T Consensus 68 vVilav 73 (279)
T PRK07679 68 ILFLAM 73 (279)
T ss_pred EEEEEe
Confidence 999984
No 191
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.002 Score=57.24 Aligned_cols=119 Identities=20% Similarity=0.156 Sum_probs=65.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh-----
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV----- 76 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~----- 76 (332)
.++|.|+||+|.+|++++..|+..|. ++.++++++ +.+.....++....... ..++.-.....
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGA-------TVAFNDGLA--AEARELAAALEAAGGRAHAIAADLADPASVQRFFDA 77 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 57999999999999999999998763 788888764 33333333332211000 00110000111
Q ss_pred --hhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecC
Q 020022 77 --EACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHA--APNCKVLVVAN 132 (332)
Q Consensus 77 --~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tN 132 (332)
+.+.+.|+||+++|..... ..+.. ..+..|..-...+.+.+.++. .+..+++++|.
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (250)
T PRK12939 78 AAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS 143 (250)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence 1125789999999875421 12222 234556655555554443321 12356777664
No 192
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.0017 Score=58.67 Aligned_cols=150 Identities=15% Similarity=0.069 Sum_probs=81.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh-
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA- 78 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a- 78 (332)
+.+++.|+||+|++|.+++..|+..|. ++++.++++ +.++....++.... ....-+... ++ ..++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~ 78 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-------DVLIAARTE--SQLDEVAEQIRAAG-RRAHVVAADLAHPEATAGLA 78 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHH
Confidence 347899999999999999999998764 789999874 33333333332211 000001111 11 1111
Q ss_pred ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecCcccchHHHHH
Q 020022 79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tNP~~~~~~~~~ 142 (332)
+...|+||+.||..... ..+ ..+.+..|......+.+... +.. +...++++|.-...
T Consensus 79 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~~sS~~~~------ 151 (263)
T PRK07814 79 GQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHS-GGGSVINISSTMGR------ 151 (263)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhc-CCeEEEEEcccccc------
Confidence 24689999999864321 112 22345566655555544443 333 23567777653221
Q ss_pred HhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.+.+....++.+......+.+.++..+.
T Consensus 152 ---~~~~~~~~Y~~sK~a~~~~~~~~~~e~~ 179 (263)
T PRK07814 152 ---LAGRGFAAYGTAKAALAHYTRLAALDLC 179 (263)
T ss_pred ---CCCCCCchhHHHHHHHHHHHHHHHHHHC
Confidence 1122222455555555566677777664
No 193
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.56 E-value=0.0013 Score=58.42 Aligned_cols=115 Identities=19% Similarity=0.229 Sum_probs=64.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eC------Chhh
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TT------DAVE 77 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~------~~~~ 77 (332)
.+++.|+||+|.+|.+++..|+..|. +|.++++++ +.+.....++... ..++.. .. +..+
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~ 73 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-------NVGLLARTE--ENLKAVAEEVEAY----GVKVVIATADVSDYEEVTA 73 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHh----CCeEEEEECCCCCHHHHHH
Confidence 46899999999999999999998764 789999874 2332222233211 011111 11 1122
Q ss_pred h-------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcc
Q 020022 78 A-------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPA 134 (332)
Q Consensus 78 a-------l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~ 134 (332)
+ +.+.|+||+++|..... +.+. ...+..|+.-...+.+.+ .+.. ...++++|...
T Consensus 74 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~~ss~~ 145 (239)
T PRK07666 74 AIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ--SGDIINISSTA 145 (239)
T ss_pred HHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CcEEEEEcchh
Confidence 2 24789999999875321 1222 233556665443444433 3332 24566666543
No 194
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.56 E-value=0.001 Score=58.91 Aligned_cols=124 Identities=19% Similarity=0.183 Sum_probs=66.0
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh-
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV- 76 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~- 76 (332)
|.+..++|.|+||+|++|++++..|+..|. ++.+...+.. ...+....++....... ..++.-.....
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 72 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGA-------NVVINYASSE-AGAEALVAEIGALGGKALAVQGDVSDAESVER 72 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCch-hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 556678999999999999999999998763 5656555431 22222222222110000 00000000111
Q ss_pred ------hhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHHHHHHHHHHHhhcC--CCeEEEEecC
Q 020022 77 ------EACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSIYKAQASALEQHAA--PNCKVLVVAN 132 (332)
Q Consensus 77 ------~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i~~~i~~~i~~~~~--~~~~viv~tN 132 (332)
+.+.+.|+||+++|..... ..+.+ ..+..|+.....+.+.+..+.. +..+++++|.
T Consensus 73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss 142 (248)
T PRK05557 73 AVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS 142 (248)
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 1124689999999875321 12222 3345666666666666654421 2245666664
No 195
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.55 E-value=0.0011 Score=59.01 Aligned_cols=157 Identities=15% Similarity=0.112 Sum_probs=81.5
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCCh--
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA-- 75 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~-- 75 (332)
|+.+.++|.|+||+|.+|.+++..|+..|. ++.++++++. +.+ ...+...... ...++....+.
T Consensus 1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-------~vi~~~r~~~-~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~ 69 (248)
T TIGR01832 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGA-------DIVGAGRSEP-SET---QQQVEALGRRFLSLTADLSDIEAIKA 69 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCchH-HHH---HHHHHhcCCceEEEECCCCCHHHHHH
Confidence 445667999999999999999999998764 7888987631 111 1112111100 00011100111
Q ss_pred -----hhhcCCCcEEEEeCCCCCCC---CC---CHHHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecCcccchHHH
Q 020022 76 -----VEACTGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSIYKAQASALE----QHAAPNCKVLVVANPANTNALI 140 (332)
Q Consensus 76 -----~~al~~aDiVi~~ag~~~~~---~~---~r~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tNP~~~~~~~ 140 (332)
.+.....|++|+.+|..... .. ...+.+..|+.....+.+.+. +.. +...+++++.-..
T Consensus 70 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~----- 143 (248)
T TIGR01832 70 LVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQG-RGGKIINIASMLS----- 143 (248)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCeEEEEEecHHh-----
Confidence 12234689999999875321 11 223445667654444444443 322 1356666664211
Q ss_pred HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
+ .+.+....++.+..-...+.+.+++.+. +..|+
T Consensus 144 ---~-~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~ 177 (248)
T TIGR01832 144 ---F-QGGIRVPSYTASKHGVAGLTKLLANEWA--AKGIN 177 (248)
T ss_pred ---c-cCCCCCchhHHHHHHHHHHHHHHHHHhC--ccCcE
Confidence 0 1111112344444444566666777764 34454
No 196
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.55 E-value=0.00042 Score=61.37 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=33.0
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
|+.+.++|.|+||+|++|+.++..|+..|. +|.++++++
T Consensus 1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~-------~V~~~~r~~ 39 (238)
T PRK05786 1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGA-------QVCINSRNE 39 (238)
T ss_pred CCcCCcEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 655567999999999999999999998764 789999874
No 197
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.55 E-value=0.0021 Score=56.73 Aligned_cols=150 Identities=13% Similarity=0.084 Sum_probs=81.0
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhh---hhhhHHHHhhhhcCCccceEeeCChhh
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA---LNGVKMELVDAAFPLLKGVVATTDAVE 77 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~---l~~~~~dl~~~~~~~~~~~~~~~~~~~ 77 (332)
|..+.+++.|+||+|.+|.+++..|++.|. ++.+.++++.... +.....|+.+. .....+
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~-------~v~~~~r~~~~~~~~~~~~~~~D~~~~----------~~~~~~ 63 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGA-------QVYGVDKQDKPDLSGNFHFLQLDLSDD----------LEPLFD 63 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCC-------EEEEEeCCcccccCCcEEEEECChHHH----------HHHHHH
Confidence 555667899999999999999999998763 6888888642110 00001121111 011223
Q ss_pred hcCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022 78 ACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 78 al~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~~~~~~~~~~~~~ 146 (332)
.+...|+||+.+|.... + ..+. ...+..|+.....+.+.+ .+.. ...+++++..... .
T Consensus 64 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~~sS~~~~---------~ 132 (235)
T PRK06550 64 WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK--SGIIINMCSIASF---------V 132 (235)
T ss_pred hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEEcChhhc---------c
Confidence 35678999999986421 1 1222 234566665444444443 3332 2456666542221 1
Q ss_pred CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
+.+....++.+..-...+.+.+++.++ +..|+
T Consensus 133 ~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~gi~ 164 (235)
T PRK06550 133 AGGGGAAYTASKHALAGFTKQLALDYA--KDGIQ 164 (235)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 112112345555444455666776664 34565
No 198
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.54 E-value=0.00027 Score=56.41 Aligned_cols=74 Identities=16% Similarity=0.235 Sum_probs=43.5
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEE
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV 86 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi 86 (332)
||+|+||+|.+|+.++..|....-+. .+.+++... -.|...............+.+.....+.+.++|+||
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e-----~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf 71 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFE-----LVALVSSSR----SAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVF 71 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEE-----EEEEEESTT----TTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCcc-----EEEeeeecc----ccCCeeehhccccccccceeEeecchhHhhcCCEEE
Confidence 79999999999999999998854321 355666542 112211111111111223334334556789999999
Q ss_pred EeC
Q 020022 87 MVG 89 (332)
Q Consensus 87 ~~a 89 (332)
++.
T Consensus 72 ~a~ 74 (121)
T PF01118_consen 72 LAL 74 (121)
T ss_dssp E-S
T ss_pred ecC
Confidence 984
No 199
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00064 Score=61.16 Aligned_cols=149 Identities=19% Similarity=0.209 Sum_probs=78.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-CCccceEeeCChhhh----
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEA---- 78 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~~~~~~~~~~~~~~a---- 78 (332)
+++|.|+||+|.+|..++..|+..|. ++.++|++. +.++....++.... . ....+++......++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~ 72 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-------TLGLVARRT--DALQAFAARLPKAARVSVYAADVRDADALAAAAADF 72 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHH
Confidence 35899999999999999999998763 789999874 33432222221110 0 000011000111122
Q ss_pred ---cCCCcEEEEeCCCCCCCC----CC---HHHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022 79 ---CTGVNIAVMVGGFPRKEG----ME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 79 ---l~~aDiVi~~ag~~~~~~----~~---r~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~ 144 (332)
....|++|+.+|...... .+ ....+..|+.-. +.+.+.+.+.. . ..+++++.-...
T Consensus 73 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~-~~iv~isS~~~~-------- 142 (257)
T PRK07024 73 IAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-R-GTLVGIASVAGV-------- 142 (257)
T ss_pred HHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-C-CEEEEEechhhc--------
Confidence 223699999998753211 22 223445555443 34445665554 3 456666542221
Q ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.+.|..-.++.++.....+...++..+.
T Consensus 143 -~~~~~~~~Y~asK~a~~~~~~~l~~e~~ 170 (257)
T PRK07024 143 -RGLPGAGAYSASKAAAIKYLESLRVELR 170 (257)
T ss_pred -CCCCCCcchHHHHHHHHHHHHHHHHHhh
Confidence 1223223455566655566666665553
No 200
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.54 E-value=0.00078 Score=60.41 Aligned_cols=120 Identities=17% Similarity=0.199 Sum_probs=65.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChh----
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV---- 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~---- 76 (332)
..+++.|+||+|.+|.+++..|+..|. ++.+.|+++ +.+.....++.+.... ...++....+..
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-------~vvl~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-------EIIINDITA--ERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIE 78 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-------EEEEEcCCH--HHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHH
Confidence 457899999999999999999998763 789999874 3343333333321100 000110000111
Q ss_pred ---hhcCCCcEEEEeCCCCCC-C--CCC---HHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecC
Q 020022 77 ---EACTGVNIAVMVGGFPRK-E--GME---RKDVMSKNVSIYKAQASALEQHA--APNCKVLVVAN 132 (332)
Q Consensus 77 ---~al~~aDiVi~~ag~~~~-~--~~~---r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tN 132 (332)
+.+...|+||+++|.... + ..+ ....+..|......+.+.+.++. .+.+.++++|.
T Consensus 79 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 145 (254)
T PRK08085 79 HIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICS 145 (254)
T ss_pred HHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 122457999999987421 1 122 22345666554444444443321 12356666664
No 201
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=97.54 E-value=9.4e-05 Score=68.14 Aligned_cols=155 Identities=15% Similarity=0.183 Sum_probs=80.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||.|+||+|++|+++...|...+. ++..+++.. .|+.+.... ....+.. .-|+|
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~-------~v~~~~r~~---------~dl~d~~~~--------~~~~~~~-~pd~V 55 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY-------EVIATSRSD---------LDLTDPEAV--------AKLLEAF-KPDVV 55 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE-------EEEEESTTC---------S-TTSHHHH--------HHHHHHH---SEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC-------EEEEeCchh---------cCCCCHHHH--------HHHHHHh-CCCeE
Confidence 6999999999999999999987653 677775542 233222100 0111222 47899
Q ss_pred EEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH----HHHhCCCCCCCcEEEechH
Q 020022 86 VMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI----LKEFAPSIPAKNITCLTRL 159 (332)
Q Consensus 86 i~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~----~~~~~~~~~~~~i~~~t~l 159 (332)
|++|+.... ...+.+.....|+...+.+++...+.. +++|.+|.- .+..-- ..+. .-..|...+|-+.+
T Consensus 56 in~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~---~~li~~STd-~VFdG~~~~~y~E~-d~~~P~~~YG~~K~ 130 (286)
T PF04321_consen 56 INCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG---ARLIHISTD-YVFDGDKGGPYTED-DPPNPLNVYGRSKL 130 (286)
T ss_dssp EE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT----EEEEEEEG-GGS-SSTSSSB-TT-S----SSHHHHHHH
T ss_pred eccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC---CcEEEeecc-EEEcCCcccccccC-CCCCCCCHHHHHHH
Confidence 999987631 123455667889999999999988764 566666631 110000 0000 00122345676777
Q ss_pred HHHHHHHHHHHHcCCCCCCeeeeEEEeccCCceee
Q 020022 160 DHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYP 194 (332)
Q Consensus 160 ds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v~ 194 (332)
...++... ... +..=+|...++|.++.+.+-
T Consensus 131 ~~E~~v~~---~~~-~~~IlR~~~~~g~~~~~~~~ 161 (286)
T PF04321_consen 131 EGEQAVRA---ACP-NALILRTSWVYGPSGRNFLR 161 (286)
T ss_dssp HHHHHHHH---H-S-SEEEEEE-SEESSSSSSHHH
T ss_pred HHHHHHHH---hcC-CEEEEecceecccCCCchhh
Confidence 66554333 111 22333544567886665443
No 202
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.53 E-value=0.00091 Score=62.45 Aligned_cols=103 Identities=11% Similarity=0.148 Sum_probs=66.9
Q ss_pred hHHHHHHHHHhcccCCCCCceEEEEEeCCCch-h----h---hhhhHHH-Hhhhh----c------CCccceEeeCC--h
Q 020022 17 IGYALVPMIARGVMLGTDQPVILHMLDIPPAA-E----A---LNGVKME-LVDAA----F------PLLKGVVATTD--A 75 (332)
Q Consensus 17 vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~-~----~---l~~~~~d-l~~~~----~------~~~~~~~~~~~--~ 75 (332)
||+.+|..++..|. +|+|+|+++.. + . ....... +.... . ....+++.+++ .
T Consensus 1 MG~giA~~~a~~G~-------~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 73 (314)
T PRK08269 1 MGQGIALAFAFAGH-------DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVARDGA 73 (314)
T ss_pred CcHHHHHHHHhCCC-------eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeecCcch
Confidence 57888988888774 89999998621 0 1 1111111 11110 0 01246776654 6
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022 76 VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~ 142 (332)
++++++||+||.+. .++.++.+.+...+.+.++|++ |+.||...+...-+.
T Consensus 74 ~~a~~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~--ilaSntS~~~~~~la 124 (314)
T PRK08269 74 ADALADADLVFEAV--------------PEVLDAKREALRWLGRHVDADA--IIASTTSTFLVTDLQ 124 (314)
T ss_pred HHHhccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCc--EEEEccccCCHHHHH
Confidence 68899999999984 4678889999999999998886 348887765443333
No 203
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.53 E-value=0.00035 Score=65.27 Aligned_cols=120 Identities=13% Similarity=0.040 Sum_probs=65.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhhc-
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEAC- 79 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~al- 79 (332)
..++|.|+||+|++|.+++..|+..|. +|++.++++ ++++....++....... ..++.......+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 75 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-------HVIMACRNL--KKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVD 75 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHH
Confidence 557899999999999999999998763 789998874 33332223332100000 00110001111222
Q ss_pred ------CCCcEEEEeCCCCCC----CCCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022 80 ------TGVNIAVMVGGFPRK----EGMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 80 ------~~aDiVi~~ag~~~~----~~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN 132 (332)
...|++|+.||.... ...+. +..+..|... ++.+.+.+.+...+.++||++|.
T Consensus 76 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS 145 (322)
T PRK07453 76 DFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGT 145 (322)
T ss_pred HHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcc
Confidence 248999999996421 12232 3345666644 44445555544321246766653
No 204
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.53 E-value=0.0041 Score=55.82 Aligned_cols=119 Identities=14% Similarity=0.148 Sum_probs=65.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEee-CC---hhhh-
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVAT-TD---AVEA- 78 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~-~~---~~~a- 78 (332)
.++|.|+||+|++|++++..|++.|. ++.++|++. +.++....++..... ....-+... ++ ...+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 72 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-------RVAVADINS--EKAANVAQEINAEYGEGMAYGFGADATSEQSVLALS 72 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHH
Confidence 35799999999999999999998763 789999874 333322222222110 000001110 11 1111
Q ss_pred ------cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCc
Q 020022 79 ------CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 79 ------l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP 133 (332)
+...|+||+++|.+... ..+.+ ..+..|+.- .+.+.+.+.+... ...++++|..
T Consensus 73 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~~ss~ 142 (259)
T PRK12384 73 RGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI-QGRIIQINSK 142 (259)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC-CcEEEEecCc
Confidence 24679999999875422 22332 334556544 4455555554432 3467777654
No 205
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.53 E-value=0.0013 Score=58.64 Aligned_cols=155 Identities=14% Similarity=0.106 Sum_probs=76.5
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeC-----
Q 020022 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT----- 73 (332)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~----- 73 (332)
++..++|.|+||+|++|++++..|+..+. ++++..... .+.......++...... ...+++...
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 74 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGS-------LVVVNAKKR-AEEMNETLKMVKENGGEGIGVLADVSTREGCETL 74 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCC-hHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHH
Confidence 34567999999999999999999998763 555544321 12222221222111000 000111011
Q ss_pred --ChhhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022 74 --DAVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 74 --~~~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~ 145 (332)
+..+.+...|+||+++|..... +.+. .+.+..|......+.+.+.++-.+...++++|.-.. +
T Consensus 75 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--------~- 145 (252)
T PRK06077 75 AKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG--------I- 145 (252)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc--------c-
Confidence 1122235689999999974321 1222 233455555444444444433222345666654211 1
Q ss_pred CCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 146 PSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 146 ~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.+.+....++.++.....+.+.+++.++
T Consensus 146 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~ 173 (252)
T PRK06077 146 RPAYGLSIYGAMKAAVINLTKYLALELA 173 (252)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 1223222344455555566666777664
No 206
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00037 Score=62.77 Aligned_cols=117 Identities=21% Similarity=0.166 Sum_probs=64.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhh------
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEA------ 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~a------ 78 (332)
+++.|+||+|++|+.++..|+..|. ++.++|++. +.++....++...... ...++.-..+..++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 72 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-------RVGAYDINE--AGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAA 72 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4799999999999999999998764 688999874 3332222222100000 00011000111222
Q ss_pred --cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCc
Q 020022 79 --CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANP 133 (332)
Q Consensus 79 --l~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP 133 (332)
....|+||++||...... .+ .+..+..|+.....+.+.+ ++. +...+++++..
T Consensus 73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS~ 137 (260)
T PRK08267 73 ATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT--PGARVINTSSA 137 (260)
T ss_pred HcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCCEEEEeCch
Confidence 235699999999754221 12 2345667776555554443 333 23456666643
No 207
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00095 Score=60.88 Aligned_cols=113 Identities=8% Similarity=0.100 Sum_probs=64.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhhhc----
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVEAC---- 79 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~al---- 79 (332)
.++|.|+||+|.+|.+++..|+..|. +|.+.++++ +.+. ++.+.... ...++....+...++
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~-------~Vi~~~r~~--~~~~----~l~~~~~~~~~~Dl~d~~~~~~~~~~~~ 70 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGW-------RVFATCRKE--EDVA----ALEAEGLEAFQLDYAEPESIAALVAQVL 70 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHH----HHHHCCceEEEccCCCHHHHHHHHHHHH
Confidence 35899999999999999999998763 789999874 3332 11111000 000110000111111
Q ss_pred ----CCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022 80 ----TGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN 132 (332)
...|++|+.||..... +.+. ...+..|+.. .+.+.+.+++.. .+.||++|.
T Consensus 71 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~--~g~iv~isS 135 (277)
T PRK05993 71 ELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG--QGRIVQCSS 135 (277)
T ss_pred HHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC--CCEEEEECC
Confidence 2469999999875321 1222 3345666654 667777776654 246777764
No 208
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.52 E-value=0.00067 Score=57.40 Aligned_cols=104 Identities=13% Similarity=0.193 Sum_probs=65.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh-hHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-VKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~-~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
|||+||||+|.+|+.++..+..+|. |++.+-+++ .++.. +..-..+. .+.--+...+++.|-|+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH-------eVTAivRn~--~K~~~~~~~~i~q~------Difd~~~~a~~l~g~Da 65 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH-------EVTAIVRNA--SKLAARQGVTILQK------DIFDLTSLASDLAGHDA 65 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC-------eeEEEEeCh--Hhccccccceeecc------cccChhhhHhhhcCCce
Confidence 6999999999999999999988873 788887775 34422 11101111 11111234578999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
||.+-|.+. ++. +.+ -.+..+.+...++.... .+++++.-
T Consensus 66 VIsA~~~~~-~~~--~~~---~~k~~~~li~~l~~agv--~RllVVGG 105 (211)
T COG2910 66 VISAFGAGA-SDN--DEL---HSKSIEALIEALKGAGV--PRLLVVGG 105 (211)
T ss_pred EEEeccCCC-CCh--hHH---HHHHHHHHHHHHhhcCC--eeEEEEcC
Confidence 999977653 221 111 22335667777776553 56777753
No 209
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.52 E-value=0.00083 Score=60.24 Aligned_cols=119 Identities=12% Similarity=0.148 Sum_probs=66.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh--
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA-- 78 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a-- 78 (332)
+.++|.|+||+|.+|+.++..|+..|. .|.++++++ +.+.....++....... ..++.-..+...+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 80 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-------HVLVNGRNA--ATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFA 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-------eEEEEeCCH--HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 457999999999999999999998764 799999874 33433333332211000 0011111111222
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHH----HHHHhhcCCCeEEEEecCc
Q 020022 79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQA----SALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 79 -----l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~----~~i~~~~~~~~~viv~tNP 133 (332)
+...|+||+.+|..... ..+. +..+..|+.-...+. +.+.+.. ...++++|..
T Consensus 81 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~ss~ 148 (256)
T PRK06124 81 RIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG--YGRIIAITSI 148 (256)
T ss_pred HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEeec
Confidence 23469999999874321 1222 234566665444444 4443333 3467777754
No 210
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=97.52 E-value=0.0011 Score=59.78 Aligned_cols=104 Identities=18% Similarity=0.311 Sum_probs=63.6
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC-CCcEEE
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-GVNIAV 86 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~-~aDiVi 86 (332)
|+|+||+|+||+++...|...|- ++..+-+++ .+.. .++ +. .+..-....+... ++|+||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh-------~v~iltR~~--~~~~---~~~-~~------~v~~~~~~~~~~~~~~DavI 61 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH-------QVTILTRRP--PKAS---QNL-HP------NVTLWEGLADALTLGIDAVI 61 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC-------eEEEEEcCC--cchh---hhc-Cc------cccccchhhhcccCCCCEEE
Confidence 68999999999999999988752 677776653 1111 111 10 1111112233333 799999
Q ss_pred EeCCCCCCCC-CC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe
Q 020022 87 MVGGFPRKEG-ME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVV 130 (332)
Q Consensus 87 ~~ag~~~~~~-~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~ 130 (332)
..||.|-... -+ -..+...-+...+.+++.|.+...|...+|..
T Consensus 62 NLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isa 109 (297)
T COG1090 62 NLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISA 109 (297)
T ss_pred ECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEec
Confidence 9999875332 12 23455666788888999998765433334443
No 211
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00079 Score=60.96 Aligned_cols=108 Identities=18% Similarity=0.223 Sum_probs=62.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhh------HHHHhhhhcCCccceEeeCChhh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV------KMELVDAAFPLLKGVVATTDAVE 77 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~------~~dl~~~~~~~~~~~~~~~~~~~ 77 (332)
+.++|.|+||+|.+|++++..|+..|. +|++.++++. .+... ..|+.+. .+..+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~D~~d~-----------~~~~~ 62 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-------RVFGTSRNPA--RAAPIPGVELLELDVTDD-----------ASVQA 62 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCChh--hccccCCCeeEEeecCCH-----------HHHHH
Confidence 345899999999999999999998763 7888888742 22110 1111111 11122
Q ss_pred h-------cCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCc
Q 020022 78 A-------CTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 78 a-------l~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP 133 (332)
+ +...|++|+++|...... .+ ....+..|..- ++.+.+.+.+.. . .+++++|..
T Consensus 63 ~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~-~~iv~isS~ 133 (270)
T PRK06179 63 AVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-S-GRIINISSV 133 (270)
T ss_pred HHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-ceEEEECCc
Confidence 2 335799999999754221 12 23445556543 444444455543 2 466677653
No 212
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00044 Score=61.01 Aligned_cols=36 Identities=19% Similarity=0.214 Sum_probs=31.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
+.++|.|+||+|.+|+.++..|++.|. ++.++++++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-------~v~~~~r~~ 41 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-------RVALIGRGA 41 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-------eEEEEeCCh
Confidence 357999999999999999999998764 789999874
No 213
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.0015 Score=60.14 Aligned_cols=120 Identities=16% Similarity=0.164 Sum_probs=68.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh---
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA--- 78 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a--- 78 (332)
.++|.|+||+|.+|++++..|+..|. ++.++++++. ..++.....+....... ..++.-.....+.
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~-------~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 117 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGA-------DIAIVYLDEH-EDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEE 117 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCcc-hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 46899999999999999999998764 7889988742 22222222222110000 0000000111111
Q ss_pred ----cCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 79 ----CTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 79 ----l~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
+...|+||+.||.... + ..+. ...+..|+.....+.+.+.++-.+...+|++|.
T Consensus 118 i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS 182 (290)
T PRK06701 118 TVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS 182 (290)
T ss_pred HHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 2357999999986422 1 1222 345677877777777777654223345666664
No 214
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00049 Score=62.62 Aligned_cols=117 Identities=16% Similarity=0.136 Sum_probs=63.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC-------hhh
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD-------AVE 77 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~-------~~~ 77 (332)
.++|.|+||+|++|++++..|+..|. ++.+.++++ +.+......+.........++....+ ..+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-------RVVATARDT--ATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE 73 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHH
Confidence 45899999999999999999988763 788998874 22221111010000000000000001 112
Q ss_pred hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022 78 ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 78 al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+...|.||+++|..... ..+ ....+..|+.. .+.+.+.+++.. . ..+|++|.
T Consensus 74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~-~~iv~vsS 136 (275)
T PRK08263 74 HFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-S-GHIIQISS 136 (275)
T ss_pred HcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C-CEEEEEcC
Confidence 234679999999975321 112 23445667665 455555555543 3 35666653
No 215
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.50 E-value=0.0013 Score=64.33 Aligned_cols=66 Identities=18% Similarity=0.320 Sum_probs=46.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||+||||.|.+|..++..|...|. ++.++|+++ +.+...+.++ .+...++..+++.+||+|
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~-------~V~v~~r~~--~~~~~~a~~~---------gv~~~~~~~e~~~~aDvV 62 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF-------EVIVTGRDP--KKGKEVAKEL---------GVEYANDNIDAAKDADIV 62 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC-------EEEEEECCh--HHHHHHHHHc---------CCeeccCHHHHhccCCEE
Confidence 4899998779999999999988763 789999874 2221111111 112345667889999999
Q ss_pred EEeC
Q 020022 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 63 Ilav 66 (437)
T PRK08655 63 IISV 66 (437)
T ss_pred EEec
Confidence 9985
No 216
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0007 Score=60.12 Aligned_cols=148 Identities=20% Similarity=0.153 Sum_probs=77.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc---CC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC---TG 81 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al---~~ 81 (332)
.+++.|+||+|++|++++..|+..|. ++.++++++ +.++.....+. .. ....++.......+++ ..
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~-~~-~~~~D~~~~~~v~~~~~~~~~ 77 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRGA-------RVVAAARNA--AALDRLAGETG-CE-PLRLDVGDDAAIRAALAAAGA 77 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhC-Ce-EEEecCCCHHHHHHHHHHhCC
Confidence 46899999999999999999998763 789999874 22321111110 00 0000110011112222 35
Q ss_pred CcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcC---CCeEEEEecCcccchHHHHHHhCCCCCCCc
Q 020022 82 VNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAA---PNCKVLVVANPANTNALILKEFAPSIPAKN 152 (332)
Q Consensus 82 aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~---~~~~viv~tNP~~~~~~~~~~~~~~~~~~~ 152 (332)
.|+||+.+|..... ..+ ....+..|+.....+.+.+.+... ...+++++|..... .+.+...
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~---------~~~~~~~ 148 (245)
T PRK07060 78 FDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL---------VGLPDHL 148 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc---------CCCCCCc
Confidence 79999999875321 122 223445666655555555544321 12466666643221 1112122
Q ss_pred EEEechHHHHHHHHHHHHHc
Q 020022 153 ITCLTRLDHNRALGQISEKL 172 (332)
Q Consensus 153 i~~~t~lds~r~~~~la~~l 172 (332)
.++.+..-..++.+.+++.+
T Consensus 149 ~y~~sK~a~~~~~~~~a~~~ 168 (245)
T PRK07060 149 AYCASKAALDAITRVLCVEL 168 (245)
T ss_pred HhHHHHHHHHHHHHHHHHHH
Confidence 34444544456666666654
No 217
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.50 E-value=0.0015 Score=58.66 Aligned_cols=119 Identities=18% Similarity=0.158 Sum_probs=67.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---h----
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---A---- 75 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~---- 75 (332)
+.++|.|+||+|++|++++..|+..|. ++.+++++. +.++....++...... ..-+... ++ .
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~i~~~~~~-~~~~~~Dl~d~~~i~~~~ 80 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-------RVVLSARKA--EELEEAAAHLEALGID-ALWIAADVADEADIERLA 80 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCe-EEEEEccCCCHHHHHHHH
Confidence 447899999999999999999998763 688998864 3333222222211100 0001111 11 1
Q ss_pred ---hhhcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHHHhh---cCCCeEEEEecC
Q 020022 76 ---VEACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASALEQH---AAPNCKVLVVAN 132 (332)
Q Consensus 76 ---~~al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i~~~---~~~~~~viv~tN 132 (332)
.+.+...|+||+++|...... .+ ....+..|+.....+.+.+.++ ..+...++++|.
T Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS 149 (259)
T PRK08213 81 EETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS 149 (259)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 111246799999998642111 11 2344567777777777765544 112346666665
No 218
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.49 E-value=0.00065 Score=63.19 Aligned_cols=73 Identities=29% Similarity=0.312 Sum_probs=48.6
Q ss_pred CCCC-CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022 1 MAKE-PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC 79 (332)
Q Consensus 1 m~~~-~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al 79 (332)
|+.+ .+||+||| +|.+|..++..|...+... +|.++|+++ +.++ ... ... . ......+..+++
T Consensus 1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~~-----~V~~~dr~~--~~~~-~a~---~~g--~--~~~~~~~~~~~~ 64 (307)
T PRK07502 1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLAG-----EIVGADRSA--ETRA-RAR---ELG--L--GDRVTTSAAEAV 64 (307)
T ss_pred CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCCc-----EEEEEECCH--HHHH-HHH---hCC--C--CceecCCHHHHh
Confidence 6644 37999999 7999999999998776322 689999874 2222 111 110 0 111234566778
Q ss_pred CCCcEEEEeC
Q 020022 80 TGVNIAVMVG 89 (332)
Q Consensus 80 ~~aDiVi~~a 89 (332)
++||+||++.
T Consensus 65 ~~aDvViiav 74 (307)
T PRK07502 65 KGADLVILCV 74 (307)
T ss_pred cCCCEEEECC
Confidence 9999999985
No 219
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0031 Score=56.06 Aligned_cols=118 Identities=14% Similarity=0.072 Sum_probs=64.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc----cceEeeCChhhhc--
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL----KGVVATTDAVEAC-- 79 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~----~~~~~~~~~~~al-- 79 (332)
++|.|+||+|++|.+++..|+..|. +|.+.|+++ +.+.....++........ .++....+..+.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 72 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-------RLYLAARDV--ERLERLADDLRARGAVAVSTHELDILDTASHAAFLDS 72 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-------EEEEEeCCH--HHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHH
Confidence 5899999999999999999998763 688999874 333322233321110000 0111111122222
Q ss_pred --CCCcEEEEeCCCCCC---CCCCHH---HHHHhhHHHHHHHHHHHHhhcC--CCeEEEEecC
Q 020022 80 --TGVNIAVMVGGFPRK---EGMERK---DVMSKNVSIYKAQASALEQHAA--PNCKVLVVAN 132 (332)
Q Consensus 80 --~~aDiVi~~ag~~~~---~~~~r~---~~~~~n~~i~~~i~~~i~~~~~--~~~~viv~tN 132 (332)
+..|++|+++|.... .+.+.+ +.+..|+.....+.+.+..+.. +...++++|.
T Consensus 73 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 135 (243)
T PRK07102 73 LPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISS 135 (243)
T ss_pred HhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 245999999886422 123333 3456666655555554443311 2345666664
No 220
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.49 E-value=0.0015 Score=58.45 Aligned_cols=73 Identities=22% Similarity=0.207 Sum_probs=46.4
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a 82 (332)
|+.+||+||| +|.+|.+++..|+..+... .-++..++++. .++++ ++.+. . .+..+.+..+.++++
T Consensus 2 m~~~kI~iIG-~G~mg~ala~~l~~~~~~~---~~~i~~~~~~~-~~~~~----~~~~~---~--~~~~~~~~~~~~~~~ 67 (245)
T PRK07634 2 LKKHRILFIG-AGRMAEAIFSGLLKTSKEY---IEEIIVSNRSN-VEKLD----QLQAR---Y--NVSTTTDWKQHVTSV 67 (245)
T ss_pred CCCCeEEEEC-cCHHHHHHHHHHHhCCCCC---cCeEEEECCCC-HHHHH----HHHHH---c--CcEEeCChHHHHhcC
Confidence 3567999999 7999999999988764211 00366777532 23332 22211 0 123445677888999
Q ss_pred cEEEEeC
Q 020022 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+||++.
T Consensus 68 DiViiav 74 (245)
T PRK07634 68 DTIVLAM 74 (245)
T ss_pred CEEEEec
Confidence 9999983
No 221
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.48 E-value=0.00077 Score=60.56 Aligned_cols=154 Identities=11% Similarity=0.113 Sum_probs=81.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhh---
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE--- 77 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~--- 77 (332)
+.+++.|+||+|.+|.+++..|+..|. +++++++++. +.+. ..+...... ...++....+..+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-------~vv~~~~~~~-~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 75 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-------DIVGVGVAEA-PETQ---AQVEALGRKFHFITADLIQQKDIDSIVS 75 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEecCchH-HHHH---HHHHHcCCeEEEEEeCCCCHHHHHHHHH
Confidence 346899999999999999999998874 7888887531 1111 112111000 0001111111111
Q ss_pred ----hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022 78 ----ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 78 ----al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~ 143 (332)
.+...|++|+.||..... ..+ .+..+..|+.. .+.+.+.+.+.. ..+.+|+++.....
T Consensus 76 ~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~~g~ii~isS~~~~------- 147 (251)
T PRK12481 76 QAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQG-NGGKIINIASMLSF------- 147 (251)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcC-CCCEEEEeCChhhc-------
Confidence 234579999999975321 122 23345566543 445555554433 23567777653321
Q ss_pred hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+..-.++.++.--..+-+.++..+. +..|+
T Consensus 148 --~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~gir 180 (251)
T PRK12481 148 --QGGIRVPSYTASKSAVMGLTRALATELS--QYNIN 180 (251)
T ss_pred --CCCCCCcchHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence 1112112355555555666777777654 34555
No 222
>PRK06398 aldose dehydrogenase; Validated
Probab=97.48 E-value=0.0019 Score=58.24 Aligned_cols=148 Identities=13% Similarity=0.100 Sum_probs=79.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh-hhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-ALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a 82 (332)
+.+++.|+||+|.+|.+++..|+..|. +|.+.++++... .......|+.+.... .. ......+.+...
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-------~Vi~~~r~~~~~~~~~~~~~D~~~~~~i--~~--~~~~~~~~~~~i 73 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-------NVINFDIKEPSYNDVDYFKVDVSNKEQV--IK--GIDYVISKYGRI 73 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCccccCceEEEEccCCCHHHH--HH--HHHHHHHHcCCC
Confidence 457899999999999999999998763 688888764211 011112233221100 00 000112223568
Q ss_pred cEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCc
Q 020022 83 NIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKN 152 (332)
Q Consensus 83 DiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~ 152 (332)
|++|+.||..... ..+. ...+..|+.. .+.+.+.+.+.. .+.+|++|.-... ...+...
T Consensus 74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~isS~~~~---------~~~~~~~ 142 (258)
T PRK06398 74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD--KGVIINIASVQSF---------AVTRNAA 142 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeCcchhc---------cCCCCCc
Confidence 9999999975321 1222 2335666654 444445444432 3567777642211 1112222
Q ss_pred EEEechHHHHHHHHHHHHHcC
Q 020022 153 ITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 153 i~~~t~lds~r~~~~la~~l~ 173 (332)
.++.+......+-+.++..++
T Consensus 143 ~Y~~sKaal~~~~~~la~e~~ 163 (258)
T PRK06398 143 AYVTSKHAVLGLTRSIAVDYA 163 (258)
T ss_pred hhhhhHHHHHHHHHHHHHHhC
Confidence 455555555667777777765
No 223
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.48 E-value=0.00059 Score=62.60 Aligned_cols=65 Identities=11% Similarity=0.085 Sum_probs=43.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||+||| .|.+|..++..|...|. +|.++|+++ +.++ ...+. .. +...++..+++++||+|
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~-------~V~~~d~~~--~~~~-~a~~~--g~------~~~~~~~~~~~~~aDlV 61 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGH-------TVYGVSRRE--STCE-RAIER--GL------VDEASTDLSLLKDCDLV 61 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCC-------EEEEEECCH--HHHH-HHHHC--CC------cccccCCHhHhcCCCEE
Confidence 4899999 79999999999988763 799999874 2222 11111 10 11112233568999999
Q ss_pred EEeC
Q 020022 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 62 ilav 65 (279)
T PRK07417 62 ILAL 65 (279)
T ss_pred EEcC
Confidence 9984
No 224
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.47 E-value=0.0058 Score=54.44 Aligned_cols=117 Identities=21% Similarity=0.152 Sum_probs=66.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCcc--ceEee----C-----
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVAT----T----- 73 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~--~~~~~----~----- 73 (332)
.++|.|+||+|++|.+++..|+..|. ++.++|++. +.+.....++.+....... ..... .
T Consensus 12 ~k~vlItG~~g~iG~~la~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~ 82 (247)
T PRK08945 12 DRIILVTGAGDGIGREAALTYARHGA-------TVILLGRTE--EKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQL 82 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------cEEEEeCCH--HHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHH
Confidence 46899999999999999999998763 688999874 3333333444332111000 01111 0
Q ss_pred --ChhhhcCCCcEEEEeCCCCCCC----CCCH---HHHHHhhHHHHHHHHH----HHHhhcCCCeEEEEecC
Q 020022 74 --DAVEACTGVNIAVMVGGFPRKE----GMER---KDVMSKNVSIYKAQAS----ALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 74 --~~~~al~~aDiVi~~ag~~~~~----~~~r---~~~~~~n~~i~~~i~~----~i~~~~~~~~~viv~tN 132 (332)
...+.+...|+||+.||..... ..+. ...+..|+.....+.+ .+.+.. ...++++|.
T Consensus 83 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~--~~~iv~~ss 152 (247)
T PRK08945 83 ADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP--AASLVFTSS 152 (247)
T ss_pred HHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC--CCEEEEEcc
Confidence 1123334689999999864221 2222 3345667664334443 334432 345666665
No 225
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0025 Score=57.25 Aligned_cols=36 Identities=36% Similarity=0.521 Sum_probs=31.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
+.++|.|+||+|++|++++..|+..|. +|.++++++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~-------~V~~~~r~~ 45 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGA-------RVHVCDVSE 45 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 457999999999999999999998763 789999874
No 226
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.46 E-value=0.0011 Score=60.37 Aligned_cols=69 Identities=22% Similarity=0.267 Sum_probs=46.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
++||+||| +|.+|+.++..|...+. . +.++.++|+++ +.++. +.+.. .+....+..+.+.++|+
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~~~g~-~---~~~v~v~~r~~--~~~~~----~~~~~-----g~~~~~~~~~~~~~adv 65 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLLASGV-P---AKDIIVSDPSP--EKRAA----LAEEY-----GVRAATDNQEAAQEADV 65 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHHhCCC-C---cceEEEEcCCH--HHHHH----HHHhc-----CCeecCChHHHHhcCCE
Confidence 46899999 69999999999987652 1 12688999874 33221 21110 12234456677889999
Q ss_pred EEEeC
Q 020022 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||++.
T Consensus 66 Vil~v 70 (267)
T PRK11880 66 VVLAV 70 (267)
T ss_pred EEEEc
Confidence 99984
No 227
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0019 Score=57.44 Aligned_cols=149 Identities=15% Similarity=0.113 Sum_probs=80.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC----C
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT----G 81 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~----~ 81 (332)
.+|.|+||+|.+|..++..|+..|. ++.+.++++ ++++.......+.. ....++.-..+..++++ .
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 71 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-------QVIACGRNQ--SVLDELHTQSANIF-TLAFDVTDHPGTKAALSQLPFI 71 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-------EEEEEECCH--HHHHHHHHhcCCCe-EEEeeCCCHHHHHHHHHhcccC
Confidence 5799999999999999999998764 789999874 33322111100000 00001111111222222 2
Q ss_pred CcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEE
Q 020022 82 VNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITC 155 (332)
Q Consensus 82 aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~ 155 (332)
.|.+|+.+|..... ..+. .+.+..|+.....+.+.+..+-.+..+++++|.-... .+.|....++
T Consensus 72 ~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~---------~~~~~~~~Y~ 142 (240)
T PRK06101 72 PELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE---------LALPRAEAYG 142 (240)
T ss_pred CCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc---------cCCCCCchhh
Confidence 47888888753211 1222 3456778877777777666542233456666542221 1223223456
Q ss_pred echHHHHHHHHHHHHHcC
Q 020022 156 LTRLDHNRALGQISEKLN 173 (332)
Q Consensus 156 ~t~lds~r~~~~la~~l~ 173 (332)
.+......+.+.++..+.
T Consensus 143 asK~a~~~~~~~l~~e~~ 160 (240)
T PRK06101 143 ASKAAVAYFARTLQLDLR 160 (240)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666666667666665543
No 228
>PRK12742 oxidoreductase; Provisional
Probab=97.46 E-value=0.0029 Score=55.93 Aligned_cols=160 Identities=10% Similarity=0.140 Sum_probs=80.7
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhh--
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVE-- 77 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~-- 77 (332)
|+. +.++|.|+||+|.+|+.++..|+..|. ++.+.+... ++.++....++. .. ....++.-.....+
T Consensus 1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~~l~~~~~-~~-~~~~D~~~~~~~~~~~ 70 (237)
T PRK12742 1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGA-------NVRFTYAGS-KDAAERLAQETG-AT-AVQTDSADRDAVIDVV 70 (237)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCC-HHHHHHHHHHhC-Ce-EEecCCCCHHHHHHHH
Confidence 553 457899999999999999999998763 677765532 222221111110 00 00001000001112
Q ss_pred -hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022 78 -ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (332)
Q Consensus 78 -al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~ 150 (332)
.....|++|+.+|..... ..+ .+..+..|+.....+...+.+...+.+.+|+++.-... . ...+.
T Consensus 71 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~------~--~~~~~ 142 (237)
T PRK12742 71 RKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD------R--MPVAG 142 (237)
T ss_pred HHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc------c--CCCCC
Confidence 234579999999875321 122 23445566654444443333332223456666542210 0 01122
Q ss_pred CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 151 KNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
...++.+......+.+.+++.++- ..|+
T Consensus 143 ~~~Y~~sKaa~~~~~~~la~~~~~--~gi~ 170 (237)
T PRK12742 143 MAAYAASKSALQGMARGLARDFGP--RGIT 170 (237)
T ss_pred CcchHHhHHHHHHHHHHHHHHHhh--hCeE
Confidence 234566666666677777777653 3454
No 229
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.45 E-value=0.0024 Score=56.90 Aligned_cols=124 Identities=22% Similarity=0.205 Sum_probs=65.1
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChh
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAV 76 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~ 76 (332)
|.. +.+++.|+||+|.+|++++..|+..|. ++.+.+... ++.++....++.+..... ..++.......
T Consensus 1 ~~~~~~~~~lItG~s~~iG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 72 (247)
T PRK12935 1 MVQLNGKVAIVTGGAKGIGKAITVALAQEGA-------KVVINYNSS-KEAAENLVNELGKEGHDVYAVQADVSKVEDAN 72 (247)
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEcCCc-HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 443 347899999999999999999998763 565554332 223332223332211000 00111111112
Q ss_pred hhc-------CCCcEEEEeCCCCCCCC------CCHHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecC
Q 020022 77 EAC-------TGVNIAVMVGGFPRKEG------MERKDVMSKNVSIYKAQASALEQHA--APNCKVLVVAN 132 (332)
Q Consensus 77 ~al-------~~aDiVi~~ag~~~~~~------~~r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tN 132 (332)
+++ ...|+||+++|...... ...++.+..|+.....+.+.+..+. .+...++++|.
T Consensus 73 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 143 (247)
T PRK12935 73 RLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS 143 (247)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 222 34799999999754221 1233456677766555555554331 12345666664
No 230
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0065 Score=54.34 Aligned_cols=158 Identities=15% Similarity=0.105 Sum_probs=80.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeC-------
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATT------- 73 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~------- 73 (332)
+.+++.|+||+|++|.+++..|+..|. ++.+.+... .+.++....++...... ...++....
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 74 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-------LVAIHYGNR-KEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYS 74 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------eEEEEcCCC-HHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHH
Confidence 346899999999999999999998763 577765332 23333233333211000 000000000
Q ss_pred Chhhh------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022 74 DAVEA------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 74 ~~~~a------l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~ 141 (332)
+..+. ....|++|+.||..... ..+. +..+..|+.-...+.+.+.....+.+.||++|.-...
T Consensus 75 ~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----- 149 (252)
T PRK12747 75 SLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR----- 149 (252)
T ss_pred HHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc-----
Confidence 01111 12689999999974211 1222 3345567655555544443332223567777653221
Q ss_pred HHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 142 KEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 142 ~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.|....++.++.-...+-+.++..++ +..|+
T Consensus 150 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gir 182 (252)
T PRK12747 150 ----ISLPDFIAYSMTKGAINTMTFTLAKQLG--ARGIT 182 (252)
T ss_pred ----cCCCCchhHHHHHHHHHHHHHHHHHHHh--HcCCE
Confidence 1122222355556655667777777665 34454
No 231
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.45 E-value=0.0019 Score=57.76 Aligned_cols=34 Identities=29% Similarity=0.341 Sum_probs=29.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
++|.|+||+|++|++++..|+..|. +++++|++.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-------~vi~~~r~~ 36 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-------DLAINDRPD 36 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecCc
Confidence 5799999999999999999998763 788888753
No 232
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0025 Score=57.19 Aligned_cols=121 Identities=17% Similarity=0.115 Sum_probs=64.5
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh
Q 020022 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA 78 (332)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a 78 (332)
+++.++|.|+||+|.+|.+++..|+..|. ++++.++++ +.+ ....++....... ..++.-..+...+
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~-------~v~~~~r~~--~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 73 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGA-------IPVIFGRSA--PDD-EFAEELRALQPRAEFVQVDLTDDAQCRDA 73 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCC-------cEEEEcCCh--hhH-HHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 34457999999999999999999998764 578888764 222 1222332111000 0011101111222
Q ss_pred c-------CCCcEEEEeCCCCCCCC--C---CHHHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecC
Q 020022 79 C-------TGVNIAVMVGGFPRKEG--M---ERKDVMSKNVSIYKAQASALEQHA-APNCKVLVVAN 132 (332)
Q Consensus 79 l-------~~aDiVi~~ag~~~~~~--~---~r~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tN 132 (332)
+ ...|+||+.+|...... . +..+.+..|+.....+.+.+.++. .....++++|.
T Consensus 74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (258)
T PRK08628 74 VEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISS 140 (258)
T ss_pred HHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECC
Confidence 2 35799999999643221 1 123445667655555544443321 11234555553
No 233
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.44 E-value=0.00073 Score=61.04 Aligned_cols=154 Identities=13% Similarity=0.118 Sum_probs=79.4
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh-----hHHHHhhhhcCCccceEeeCChhh
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG-----VKMELVDAAFPLLKGVVATTDAVE 77 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~-----~~~dl~~~~~~~~~~~~~~~~~~~ 77 (332)
+..+++.|+||+|.+|.+++..|+..|. ++.+.|+++. .+.. ...|+.+.... .. ......+
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~-------~v~~~~~~~~--~~~~~~~~~~~~D~~~~~~~--~~--~~~~~~~ 73 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGA-------NVVNADIHGG--DGQHENYQFVPTDVSSAEEV--NH--TVAEIIE 73 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCcc--ccccCceEEEEccCCCHHHH--HH--HHHHHHH
Confidence 3457899999999999999999998774 7888888742 2211 11122111100 00 0001122
Q ss_pred hcCCCcEEEEeCCCCCCC------------CCCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHH
Q 020022 78 ACTGVNIAVMVGGFPRKE------------GMER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALI 140 (332)
Q Consensus 78 al~~aDiVi~~ag~~~~~------------~~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~ 140 (332)
.+...|++|++||..... ..+. ...+..|+.....+.+.+..+. .+...+|++|.-...
T Consensus 74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~---- 149 (266)
T PRK06171 74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL---- 149 (266)
T ss_pred HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc----
Confidence 234679999999964211 1122 2345666655555554444331 122456666643321
Q ss_pred HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+....++.++.--..+-+.++..+. +..|+
T Consensus 150 -----~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~gi~ 182 (266)
T PRK06171 150 -----EGSEGQSCYAATKAALNSFTRSWAKELG--KHNIR 182 (266)
T ss_pred -----CCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 1112112344444444455566666654 34565
No 234
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.002 Score=57.95 Aligned_cols=154 Identities=14% Similarity=0.125 Sum_probs=81.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-----ccceEeeCChhhh-
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----LKGVVATTDAVEA- 78 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-----~~~~~~~~~~~~a- 78 (332)
.+++.|+||+|.+|.+++..|+..|. +++++|+++ +.++....++....... ..++.-..+..++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGA-------AVALADLDA--ALAERAAAAIARDVAGARVLAVPADVTDAASVAAAV 77 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHH
Confidence 46899999999999999999998774 789999874 34443333343210000 0011001111122
Q ss_pred ------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022 79 ------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 79 ------l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~ 142 (332)
+...|++|+.||..... ..+. ...+..|+... +.+.+.+.+.. .+.||++|.....
T Consensus 78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~------ 149 (260)
T PRK07063 78 AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG--RGSIVNIASTHAF------ 149 (260)
T ss_pred HHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC--CeEEEEECChhhc------
Confidence 24689999999964321 1222 23345555443 44445454432 3567777653221
Q ss_pred HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+..-.++.++..-..+-+.+++.+. +..|+
T Consensus 150 ---~~~~~~~~Y~~sKaa~~~~~~~la~el~--~~gIr 182 (260)
T PRK07063 150 ---KIIPGCFPYPVAKHGLLGLTRALGIEYA--ARNVR 182 (260)
T ss_pred ---cCCCCchHHHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence 1112111234444444566666777654 44565
No 235
>PRK06182 short chain dehydrogenase; Validated
Probab=97.44 E-value=0.00062 Score=61.85 Aligned_cols=114 Identities=15% Similarity=0.163 Sum_probs=65.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhc---
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEAC--- 79 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al--- 79 (332)
+.++|.|+||+|.+|.+++..|+..|. +|++.++++ +.++. +..... ....++....+..+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~~--~~l~~----~~~~~~~~~~~Dv~~~~~~~~~~~~~ 68 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-------TVYGAARRV--DKMED----LASLGVHPLSLDVTDEASIKAAVDTI 68 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHH----HHhCCCeEEEeeCCCHHHHHHHHHHH
Confidence 346899999999999999999998763 788888874 33321 111000 0000111111112222
Q ss_pred ----CCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022 80 ----TGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+.|++|+.+|..... ..+ .+..+..|... ++.+.+.+++.. . .+++++|.
T Consensus 69 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~-g~iv~isS 133 (273)
T PRK06182 69 IAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-S-GRIINISS 133 (273)
T ss_pred HHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-C-CEEEEEcc
Confidence 3789999999975321 112 23445566543 566666776654 2 45667664
No 236
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0066 Score=54.47 Aligned_cols=157 Identities=11% Similarity=0.082 Sum_probs=79.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC--chhhhhhhHHHHhhhhcC---CccceEeeCChhhh-
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFP---LLKGVVATTDAVEA- 78 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~--~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~a- 78 (332)
.+++.|+||+|.+|.+++..|+..|. ++++++.+. ..+.++....++...... ...++....+..++
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~-------~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 80 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGA-------KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLF 80 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCC-------cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHH
Confidence 46899999999999999999998763 445554432 112222222222211100 00011111111111
Q ss_pred ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEe-cCcccchHHHHHHhC
Q 020022 79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVV-ANPANTNALILKEFA 145 (332)
Q Consensus 79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~-tNP~~~~~~~~~~~~ 145 (332)
+...|++|++||..... ..+ ....+..|+.....+.+.+.+...+.+.++++ +..... .
T Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-------~- 152 (257)
T PRK12744 81 DDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-------F- 152 (257)
T ss_pred HHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-------c-
Confidence 24679999999974321 122 23345667655444444444332222334443 332221 0
Q ss_pred CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.|....++.++.....+-+.+++.++ +..|+
T Consensus 153 --~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~ 183 (257)
T PRK12744 153 --TPFYSAYAGSKAPVEHFTRAASKEFG--ARGIS 183 (257)
T ss_pred --CCCcccchhhHHHHHHHHHHHHHHhC--cCceE
Confidence 12122456677767788888888876 34565
No 237
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.42 E-value=0.0013 Score=67.74 Aligned_cols=95 Identities=13% Similarity=0.132 Sum_probs=61.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEE--EEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH--MLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~--L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~ 81 (332)
..|||.|+||+|++|++++..|...+. ++. .-|+.+ .+ .+... ..+ .+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~-------~v~~~~~~l~d-~~-------~v~~~-------------i~~--~~ 428 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGI-------AYEYGKGRLED-RS-------SLLAD-------------IRN--VK 428 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCC-------eEEeecccccc-HH-------HHHHH-------------HHh--hC
Confidence 357999999999999999999987652 342 112110 00 00000 000 26
Q ss_pred CcEEEEeCCCCCCCC-----CCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 82 VNIAVMVGGFPRKEG-----MERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 82 aDiVi~~ag~~~~~~-----~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
.|+||++|+....+. .+..+.+..|+....++++.++++.. +++++|
T Consensus 429 pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~---~~v~~S 480 (668)
T PLN02260 429 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL---LMMNFA 480 (668)
T ss_pred CCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC---eEEEEc
Confidence 899999998753221 24556778999999999999998752 344553
No 238
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.42 E-value=0.00095 Score=61.65 Aligned_cols=65 Identities=20% Similarity=0.316 Sum_probs=46.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.+||+||| .|.+|+.++..|+..|. ++.++|+++ ++.+ .+... ......+..+++++||+
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~g~-------~v~~~d~~~--~~~~----~~~~~------g~~~~~~~~e~~~~~d~ 61 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKAGY-------SLVVYDRNP--EAVA----EVIAA------GAETASTAKAVAEQCDV 61 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHC------CCeecCCHHHHHhcCCE
Confidence 35899999 79999999999988653 788999874 2222 11111 12234456778899999
Q ss_pred EEEeC
Q 020022 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||++.
T Consensus 62 vi~~v 66 (296)
T PRK11559 62 IITML 66 (296)
T ss_pred EEEeC
Confidence 99984
No 239
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0056 Score=55.63 Aligned_cols=35 Identities=20% Similarity=0.187 Sum_probs=29.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
.+++.|+||+|++|++++..|+..|. .|+++++++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-------~V~~~~r~~ 37 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-------LVIATMRNP 37 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-------EEEEEeCCH
Confidence 45799999999999999999998763 688888764
No 240
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.41 E-value=0.0019 Score=58.72 Aligned_cols=68 Identities=18% Similarity=0.273 Sum_probs=46.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
|||++|| .|.||++++..|+..+... +.+|..+ |+++ ++++ .+.+. .+....+..+++++||+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~---~~~i~v~~~r~~--~~~~----~~~~~------g~~~~~~~~e~~~~aDv 64 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVP---PSRISTADDSNP--ARRD----VFQSL------GVKTAASNTEVVKSSDV 64 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCC---cceEEEEeCCCH--HHHH----HHHHc------CCEEeCChHHHHhcCCE
Confidence 5899999 7999999999999876321 2267888 7763 3322 12211 22344566677889999
Q ss_pred EEEeC
Q 020022 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||++.
T Consensus 65 Vil~v 69 (266)
T PLN02688 65 IILAV 69 (266)
T ss_pred EEEEE
Confidence 99985
No 241
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.40 E-value=0.0022 Score=57.69 Aligned_cols=154 Identities=14% Similarity=0.113 Sum_probs=79.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC--CccceEeeCChh-------
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP--LLKGVVATTDAV------- 76 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~--~~~~~~~~~~~~------- 76 (332)
|+|.|+||+|.+|.+++..|+..|. ++.+.++++ +.+.....++.+.... ...++....+..
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~ 71 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA-------RVVISSRNE--ENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAW 71 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHH
Confidence 4899999999999999999998874 789999874 3343333333321100 000110000111
Q ss_pred hhcCCCcEEEEeCCCCCC-C----CCCHHHH---HHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022 77 EACTGVNIAVMVGGFPRK-E----GMERKDV---MSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 77 ~al~~aDiVi~~ag~~~~-~----~~~r~~~---~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~ 144 (332)
+.+...|++|+.+|.... + ..+.+++ +..|+ -..+.+.+.+.+.. +.+.||++|.-...
T Consensus 72 ~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~g~iv~isS~~~~-------- 142 (259)
T PRK08340 72 ELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK-MKGVLVYLSSVSVK-------- 142 (259)
T ss_pred HhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC-CCCEEEEEeCcccC--------
Confidence 123468999999997421 1 1222222 23332 23444555554322 23567776643221
Q ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
...|....++.++---..+-+.+++.++ +..|+
T Consensus 143 -~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~gI~ 175 (259)
T PRK08340 143 -EPMPPLVLADVTRAGLVQLAKGVSRTYG--GKGIR 175 (259)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHHhC--CCCEE
Confidence 1122212233344444566667777665 45565
No 242
>PRK06196 oxidoreductase; Provisional
Probab=97.40 E-value=0.0014 Score=60.94 Aligned_cols=157 Identities=10% Similarity=0.056 Sum_probs=81.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCCh-------hh
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA-------VE 77 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~-------~~ 77 (332)
.++|.|+||+|++|.+++..|+..|. +|++.++++ +.++....++..... ...++.-..+. .+
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~-------~Vv~~~R~~--~~~~~~~~~l~~v~~-~~~Dl~d~~~v~~~~~~~~~ 95 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGA-------HVIVPARRP--DVAREALAGIDGVEV-VMLDLADLESVRAFAERFLD 95 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhhhCeE-EEccCCCHHHHHHHHHHHHh
Confidence 36899999999999999999998763 788999874 333322222221100 00011100011 11
Q ss_pred hcCCCcEEEEeCCCCCCCC----CCHHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH---hCC
Q 020022 78 ACTGVNIAVMVGGFPRKEG----MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE---FAP 146 (332)
Q Consensus 78 al~~aDiVi~~ag~~~~~~----~~r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~---~~~ 146 (332)
.+...|++|+.||....+. ...+..+..|... ++.+.+.+.+.. .++||++|............ ...
T Consensus 96 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~~~~~~~~~~~~~~~~ 173 (315)
T PRK06196 96 SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA--GARVVALSSAGHRRSPIRWDDPHFTR 173 (315)
T ss_pred cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC--CCeEEEECCHHhccCCCCccccCccC
Confidence 2356899999999743221 1233445556544 566666666543 35677776421110000000 000
Q ss_pred CCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 147 SIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 147 ~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.+++...++.++.....+.+.+++.+.
T Consensus 174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~ 200 (315)
T PRK06196 174 GYDKWLAYGQSKTANALFAVHLDKLGK 200 (315)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhc
Confidence 112122355566665666667777653
No 243
>PRK07985 oxidoreductase; Provisional
Probab=97.40 E-value=0.0047 Score=56.95 Aligned_cols=151 Identities=16% Similarity=0.118 Sum_probs=78.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC----------
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---------- 74 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---------- 74 (332)
+++.|+||+|.+|.+++..|+..|. ++.+.+++.+.+.++.....+.... .....+... ++
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~-------~Vi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~ 121 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGA-------DVAISYLPVEEEDAQDVKKIIEECG-RKAVLLPGDLSDEKFARSLVHE 121 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC-------EEEEecCCcchhhHHHHHHHHHHcC-CeEEEEEccCCCHHHHHHHHHH
Confidence 6899999999999999999998774 6788776532222221111111110 000001110 11
Q ss_pred hhhhcCCCcEEEEeCCCCCC--C--CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022 75 AVEACTGVNIAVMVGGFPRK--E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 75 ~~~al~~aDiVi~~ag~~~~--~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~ 147 (332)
..+.+...|++|+.||.... + ..+. ...+..|+...-.+.+.+..+..+++.||++|..... .+
T Consensus 122 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~---------~~ 192 (294)
T PRK07985 122 AHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAY---------QP 192 (294)
T ss_pred HHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhc---------cC
Confidence 11234567999999986421 1 2233 3445677765555555554432234567777653221 11
Q ss_pred CCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 148 IPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 148 ~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.+....++.++..-..+-+.+++.++
T Consensus 193 ~~~~~~Y~asKaal~~l~~~la~el~ 218 (294)
T PRK07985 193 SPHLLDYAATKAAILNYSRGLAKQVA 218 (294)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHh
Confidence 22112345555444556666666653
No 244
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0012 Score=60.97 Aligned_cols=118 Identities=19% Similarity=0.182 Sum_probs=65.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhh---
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVE--- 77 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~--- 77 (332)
..++|.|+||+|.+|.+++..|+..|. +|.+.+++. +.++....++...... ...++....+..+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-------~Vi~~~R~~--~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~ 109 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-------TVVAVARRE--DLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVA 109 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 347899999999999999999998763 799999874 4444333333211000 0001100011112
Q ss_pred ----hcCCCcEEEEeCCCCCCCC-----CCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022 78 ----ACTGVNIAVMVGGFPRKEG-----MER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 78 ----al~~aDiVi~~ag~~~~~~-----~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+...|++|+.||...... .+. ...+..|.. .++.+.+.+.+.. ...++++|.
T Consensus 110 ~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--~g~iv~isS 178 (293)
T PRK05866 110 DVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG--DGHIINVAT 178 (293)
T ss_pred HHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECC
Confidence 2347899999998753211 011 223445543 3555555555543 245666654
No 245
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=97.39 E-value=0.0013 Score=61.15 Aligned_cols=125 Identities=20% Similarity=0.242 Sum_probs=74.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||+|+| +|.||+.++..|.+.+ . .+.++-+++..+.++..-+.+.+... .......+....+.+..+|+|
T Consensus 1 mkI~IlG-aGAvG~l~g~~L~~~g-~------~V~~~~R~~~~~~l~~~GL~i~~~~~-~~~~~~~~~~~~~~~~~~Dlv 71 (307)
T COG1893 1 MKILILG-AGAIGSLLGARLAKAG-H------DVTLLVRSRRLEALKKKGLRIEDEGG-NFTTPVVAATDAEALGPADLV 71 (307)
T ss_pred CeEEEEC-CcHHHHHHHHHHHhCC-C------eEEEEecHHHHHHHHhCCeEEecCCC-ccccccccccChhhcCCCCEE
Confidence 5999999 6999999999999986 2 46666655311222211122222111 001122233455667899999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEechH
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTRL 159 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~l 159 (332)
|++.-.. -..+..+.+..+..++++|+..-|=++..- .+.++ ++.+++ .|.|..
T Consensus 72 iv~vKa~----------------q~~~al~~l~~~~~~~t~vl~lqNG~g~~e-~l~~~---~~~~~il~G~~~~ 126 (307)
T COG1893 72 IVTVKAY----------------QLEEALPSLAPLLGPNTVVLFLQNGLGHEE-ELRKI---LPKETVLGGVTTH 126 (307)
T ss_pred EEEeccc----------------cHHHHHHHhhhcCCCCcEEEEEeCCCcHHH-HHHHh---CCcceEEEEEeee
Confidence 9995322 133666777777777777887888766444 44443 465654 444544
No 246
>PRK06924 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0013 Score=58.74 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=29.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
++|.|+||+|.+|+.++..|+..|. +|.++++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~-------~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT-------HVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC-------EEEEEeCCc
Confidence 4799999999999999999998763 688888764
No 247
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.39 E-value=0.0036 Score=56.90 Aligned_cols=35 Identities=26% Similarity=0.344 Sum_probs=30.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
.+++.|+||+|.+|++++..|+..|. +++++|+++
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G~-------~V~~~~r~~ 44 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGA-------KVAILDRNQ 44 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 46899999999999999999998764 789999874
No 248
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0011 Score=61.46 Aligned_cols=156 Identities=13% Similarity=0.069 Sum_probs=83.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-eCC------hhh
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-TTD------AVE 77 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-~~~------~~~ 77 (332)
.++|.|+||+|++|++++..|+..|. ++++++++. +.+.....++.... + ..++.. ..| ..+
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G~-------~vi~~~r~~--~~~~~~~~~l~~~~-~-~~~~~~~~~Dl~d~~~v~~ 84 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKGA-------HVVLAVRNL--DKGKAAAARITAAT-P-GADVTLQELDLTSLASVRA 84 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhC-C-CCceEEEECCCCCHHHHHH
Confidence 46899999999999999999998763 688888864 33322222332110 0 001110 011 111
Q ss_pred -------hcCCCcEEEEeCCCCCCCC----CCHHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccch-HHH-
Q 020022 78 -------ACTGVNIAVMVGGFPRKEG----MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTN-ALI- 140 (332)
Q Consensus 78 -------al~~aDiVi~~ag~~~~~~----~~r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~-~~~- 140 (332)
.+...|+||+.||....+. ...+..+..|... .+.+.+.+++.. .++||++|...... ...
T Consensus 85 ~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~~~~~~~~~ 162 (306)
T PRK06197 85 AADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP--GSRVVTVSSGGHRIRAAIH 162 (306)
T ss_pred HHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC--CCEEEEECCHHHhccCCCC
Confidence 1246899999998643211 1223345566554 666777766543 34677776432110 000
Q ss_pred HHHh--CCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 141 LKEF--APSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 141 ~~~~--~~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.... ...+++...++.+.+-...+.+.+++.+.
T Consensus 163 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~ 197 (306)
T PRK06197 163 FDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLA 197 (306)
T ss_pred ccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0000 00112222356666666777777888765
No 249
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.37 E-value=0.0045 Score=56.53 Aligned_cols=156 Identities=19% Similarity=0.213 Sum_probs=92.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-c----cceEeeCChh--
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-L----KGVVATTDAV-- 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~----~~~~~~~~~~-- 76 (332)
..+.|.|+||+..+|.++|+.|+..|. .++|+.+.. ++++....++....... . ..++-..+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-------~l~lvar~~--rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~ 81 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-------KLVLVARRA--RRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKF 81 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-------ceEEeehhh--hhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHH
Confidence 457899999999999999999999875 466776653 45554445554432211 0 0111111111
Q ss_pred -----hhcCCCcEEEEeCCCCCCCCC----CH---HHHHH----hhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022 77 -----EACTGVNIAVMVGGFPRKEGM----ER---KDVMS----KNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI 140 (332)
Q Consensus 77 -----~al~~aDiVi~~ag~~~~~~~----~r---~~~~~----~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~ 140 (332)
.-+.+.|+.|..||+.+ .+. +. ...+. ..+-..+...+.+++.. ++.|++++....-+
T Consensus 82 ~~~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~--~GhIVvisSiaG~~--- 155 (282)
T KOG1205|consen 82 VEWAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN--DGHIVVISSIAGKM--- 155 (282)
T ss_pred HHHHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC--CCeEEEEecccccc---
Confidence 34568999999999987 331 11 12333 34578888999998875 46777777655421
Q ss_pred HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+|..-++..+.-.-..|-..|...+.-....|.
T Consensus 156 ------~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~ 189 (282)
T KOG1205|consen 156 ------PLPFRSIYSASKHALEGFFETLRQELIPLGTIII 189 (282)
T ss_pred ------CCCcccccchHHHHHHHHHHHHHHHhhccCceEE
Confidence 2343335555555444555555555544333343
No 250
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=97.37 E-value=0.00077 Score=61.38 Aligned_cols=151 Identities=13% Similarity=0.185 Sum_probs=93.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC--CCc
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--GVN 83 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--~aD 83 (332)
|||.|+|++|++|+.|...|. .+ .++.-.|..+ +|+.+.. ...+.++ .-|
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~-------~~v~a~~~~~---------~Ditd~~-----------~v~~~i~~~~PD 52 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GE-------FEVIATDRAE---------LDITDPD-----------AVLEVIRETRPD 52 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CC-------ceEEeccCcc---------ccccChH-----------HHHHHHHhhCCC
Confidence 469999999999999998886 22 1666666542 4554432 2334444 459
Q ss_pred EEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC-cc--cchHHHHHHhCCCC-CCCcEEEec
Q 020022 84 IAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-PA--NTNALILKEFAPSI-PAKNITCLT 157 (332)
Q Consensus 84 iVi~~ag~~~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN-P~--~~~~~~~~~~~~~~-~~~~i~~~t 157 (332)
+||++|.++.- ...+++.-+..|+.....+++...+.+ +++|.+|. -| ..-. -.++. +.. .|-.++|-|
T Consensus 53 vVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g---a~lVhiSTDyVFDG~~~-~~Y~E-~D~~~P~nvYG~s 127 (281)
T COG1091 53 VVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG---ARLVHISTDYVFDGEKG-GPYKE-TDTPNPLNVYGRS 127 (281)
T ss_pred EEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC---CeEEEeecceEecCCCC-CCCCC-CCCCCChhhhhHH
Confidence 99999998753 234566677899999999999999886 56677763 22 1000 00000 111 233578888
Q ss_pred hHHHHHHHHHHHHHcCCCCCCeeeeEEEeccCCcee
Q 020022 158 RLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 193 (332)
Q Consensus 158 ~lds~r~~~~la~~l~v~~~~v~~~~v~G~hg~~~v 193 (332)
++....+.... +-+.-=++...|+|++|.+.+
T Consensus 128 Kl~GE~~v~~~----~~~~~I~Rtswv~g~~g~nFv 159 (281)
T COG1091 128 KLAGEEAVRAA----GPRHLILRTSWVYGEYGNNFV 159 (281)
T ss_pred HHHHHHHHHHh----CCCEEEEEeeeeecCCCCCHH
Confidence 88765554333 222233455556899886554
No 251
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0096 Score=56.02 Aligned_cols=116 Identities=19% Similarity=0.136 Sum_probs=65.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh---
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE--- 77 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~--- 77 (332)
.++|.|+||+|.+|..++..|+..|. +|+++++++ +.++....++...... ..-+... ++ ..+
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~-------~Vvl~~R~~--~~l~~~~~~l~~~g~~-~~~v~~Dv~d~~~v~~~~~ 77 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGA-------KVVLLARGE--EGLEALAAEIRAAGGE-ALAVVADVADAEAVQAAAD 77 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHHcCCc-EEEEEecCCCHHHHHHHHH
Confidence 36899999999999999999998764 789999874 4444333333321100 0001110 11 111
Q ss_pred ----hcCCCcEEEEeCCCCCCC---CCCHHH---HHHhh----HHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 78 ----ACTGVNIAVMVGGFPRKE---GMERKD---VMSKN----VSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 78 ----al~~aDiVi~~ag~~~~~---~~~r~~---~~~~n----~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+...|++|+.+|..... ..+.++ .+..| +...+.+.+.+.+.. ...+|+++.
T Consensus 78 ~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~--~g~iV~isS 144 (334)
T PRK07109 78 RAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD--RGAIIQVGS 144 (334)
T ss_pred HHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEeCC
Confidence 134689999999874321 122222 23333 445566666666543 245666664
No 252
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0016 Score=58.54 Aligned_cols=39 Identities=38% Similarity=0.489 Sum_probs=32.5
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
|++ ..+++.|+||+|.+|++++..|+..|. +++++++++
T Consensus 1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~-------~Vv~~~r~~ 40 (263)
T PRK08226 1 MGKLTGKTALITGALQGIGEGIARVFARHGA-------NLILLDISP 40 (263)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCCH
Confidence 543 457999999999999999999998764 789999874
No 253
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0011 Score=59.00 Aligned_cols=121 Identities=17% Similarity=0.190 Sum_probs=66.2
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---h
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---A 75 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~ 75 (332)
|+. .++++.|+||+|.+|..++..|+..|. .|.++++++ +.+.....++...... ..-+... ++ .
T Consensus 1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~ 70 (241)
T PRK07454 1 MSLNSMPRALITGASSGIGKATALAFAKAGW-------DLALVARSQ--DALEALAAELRSTGVK-AAAYSIDLSNPEAI 70 (241)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhCCCc-EEEEEccCCCHHHH
Confidence 664 346899999999999999999998764 689999874 2232222222211000 0001110 11 1
Q ss_pred hhh-------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCc
Q 020022 76 VEA-------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 76 ~~a-------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP 133 (332)
..+ +...|+||+.+|..... ..+ ....+..|+.. .+.+.+.+.+.. ...++++|..
T Consensus 71 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS~ 143 (241)
T PRK07454 71 APGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG--GGLIINVSSI 143 (241)
T ss_pred HHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC--CcEEEEEccH
Confidence 112 24589999999975321 112 23345556554 444445454432 3456666643
No 254
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=97.36 E-value=0.0015 Score=64.26 Aligned_cols=98 Identities=13% Similarity=0.011 Sum_probs=60.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC---CC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---GV 82 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~---~a 82 (332)
.+|+||| .|.+|+++|..|+..|. +|.+||+++ ++.+ ++.+........+....+..++++ ++
T Consensus 2 ~~IgvIG-LG~MG~~lA~nL~~~G~-------~V~v~dr~~--~~~~----~l~~~~~~~g~~i~~~~s~~e~v~~l~~~ 67 (470)
T PTZ00142 2 SDIGLIG-LAVMGQNLALNIASRGF-------KISVYNRTY--EKTE----EFVKKAKEGNTRVKGYHTLEELVNSLKKP 67 (470)
T ss_pred CEEEEEe-EhHHHHHHHHHHHHCCC-------eEEEEeCCH--HHHH----HHHHhhhhcCCcceecCCHHHHHhcCCCC
Confidence 4899999 79999999999998774 799999984 3332 222110000112334556666665 58
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
|+||+..- +-+.++++.+.+..+-.++.++|..+|
T Consensus 68 d~Iil~v~---------------~~~~v~~vi~~l~~~L~~g~iIID~gn 102 (470)
T PTZ00142 68 RKVILLIK---------------AGEAVDETIDNLLPLLEKGDIIIDGGN 102 (470)
T ss_pred CEEEEEeC---------------ChHHHHHHHHHHHhhCCCCCEEEECCC
Confidence 98887732 112344444455544446667777876
No 255
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00099 Score=58.38 Aligned_cols=115 Identities=22% Similarity=0.253 Sum_probs=61.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC---
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT--- 80 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~--- 80 (332)
++++|.|+||+|++|+.++..|+.. . ++.+++++. +.++....++.+.. ....++.-..+..++++
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 70 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-H-------TLLLGGRPA--ERLDELAAELPGAT-PFPVDLTDPEAIAAAVEQLG 70 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-C-------CEEEEeCCH--HHHHHHHHHhccce-EEecCCCCHHHHHHHHHhcC
Confidence 4568999999999999999999875 2 688998873 22211111111100 00011111112334443
Q ss_pred CCcEEEEeCCCCCCC---CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022 81 GVNIAVMVGGFPRKE---GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN 132 (332)
+.|+||+++|..... ..+.. ..+..|... .+.+.+.+++. ...++++|.
T Consensus 71 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~v~~ss 129 (227)
T PRK08219 71 RLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA---HGHVVFINS 129 (227)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCeEEEEcc
Confidence 689999999875321 11222 234555555 44444444433 234666654
No 256
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.35 E-value=0.0023 Score=58.65 Aligned_cols=101 Identities=13% Similarity=0.136 Sum_probs=60.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
+||+||| +|.+|++++..|...+.+. +.++.++++++ +++++ .+... . ..+..+.+..++++++|+|
T Consensus 2 ~~I~iIG-~G~mG~ala~~L~~~g~~~---~~~V~~~~r~~-~~~~~----~l~~~-~---~~~~~~~~~~e~~~~aDvV 68 (277)
T PRK06928 2 EKIGFIG-YGSMADMIATKLLETEVAT---PEEIILYSSSK-NEHFN----QLYDK-Y---PTVELADNEAEIFTKCDHS 68 (277)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCC---cccEEEEeCCc-HHHHH----HHHHH-c---CCeEEeCCHHHHHhhCCEE
Confidence 5899999 7999999999998876321 12688998763 22222 11111 0 1223445666778999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~ 135 (332)
|++.-. ..++++++.+..+-.++..+|.+.+-++
T Consensus 69 ilavpp----------------~~~~~vl~~l~~~l~~~~~ivS~~aGi~ 102 (277)
T PRK06928 69 FICVPP----------------LAVLPLLKDCAPVLTPDRHVVSIAAGVS 102 (277)
T ss_pred EEecCH----------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 988421 2233555555444334555666666443
No 257
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.35 E-value=0.003 Score=57.04 Aligned_cols=150 Identities=14% Similarity=0.161 Sum_probs=79.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCCh-----
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDA----- 75 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~----- 75 (332)
..+++.|+||+|.+|.+++..|+..|. ++++.++++ +.++....++....... ..++.-....
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-------~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 79 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-------TIVFNDINQ--ELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVS 79 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 346899999999999999999998763 688888764 33433333332211000 0011000011
Q ss_pred --hhhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022 76 --VEACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 76 --~~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~ 143 (332)
.+.+...|++|+.+|..... ..+.+ ..+..|.. ..+.+.+.+.+.. .+.|++++.....
T Consensus 80 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~isS~~~~------- 150 (265)
T PRK07097 80 QIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG--HGKIINICSMMSE------- 150 (265)
T ss_pred HHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC--CcEEEEEcCcccc-------
Confidence 12234579999999974311 12222 23345554 3344455554432 3567777754321
Q ss_pred hCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 144 FAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.+.+....++.++.--..+.+.+++.++
T Consensus 151 --~~~~~~~~Y~~sKaal~~l~~~la~e~~ 178 (265)
T PRK07097 151 --LGRETVSAYAAAKGGLKMLTKNIASEYG 178 (265)
T ss_pred --CCCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence 1112222455555554566667777654
No 258
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.34 E-value=0.002 Score=58.54 Aligned_cols=170 Identities=14% Similarity=0.073 Sum_probs=102.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CC---c-cceEeeCChhhhcC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PL---L-KGVVATTDAVEACT 80 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~---~-~~~~~~~~~~~al~ 80 (332)
|++.|+||+||+|++++..++.... + .+|..+|.-.- .|....|.+... +. . ..+.........++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~---d--~~v~~~DkLTY----Agn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~ 71 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHP---D--DHVVNLDKLTY----AGNLENLADVEDSPRYRFVQGDICDRELVDRLFK 71 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCC---C--ceEEEEecccc----cCCHHHHHhhhcCCCceEEeccccCHHHHHHHHH
Confidence 5899999999999999998887532 1 26788885431 222222322221 11 0 11111112334455
Q ss_pred --CCcEEEEeCCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC-cc--cchH--HHHHHhCCCCCCC
Q 020022 81 --GVNIAVMVGGFPR--KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN-PA--NTNA--LILKEFAPSIPAK 151 (332)
Q Consensus 81 --~aDiVi~~ag~~~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN-P~--~~~~--~~~~~~~~~~~~~ 151 (332)
+.|+|++.|.-+. +.-.....+.+.|+--...+.+.++++.. .-+++-+|. -| ++.. ..+.+. +.+.|+
T Consensus 72 ~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~-~frf~HISTDEVYG~l~~~~~~FtE~-tp~~Ps 149 (340)
T COG1088 72 EYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWG-KFRFHHISTDEVYGDLGLDDDAFTET-TPYNPS 149 (340)
T ss_pred hcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcc-cceEEEeccccccccccCCCCCcccC-CCCCCC
Confidence 6899999875432 11134567899999999999999999973 235666653 11 1100 012222 346666
Q ss_pred cEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe
Q 020022 152 NITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186 (332)
Q Consensus 152 ~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G 186 (332)
.-++.+.-.+--|.+...+.+|++..=.++.+-.|
T Consensus 150 SPYSASKAasD~lVray~~TYglp~~ItrcSNNYG 184 (340)
T COG1088 150 SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYG 184 (340)
T ss_pred CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcC
Confidence 77777777777888889999999754444443334
No 259
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.34 E-value=0.0033 Score=56.40 Aligned_cols=154 Identities=14% Similarity=0.090 Sum_probs=78.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChh----
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV---- 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~---- 76 (332)
..+.+.|+||+|.+|.+++..|+..|. +++++|..+.++ ...++...... ...++....+..
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-------~vv~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 77 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-------DIVGINIVEPTE----TIEQVTALGRRFLSLTADLRKIDGIPALLE 77 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEecCcchHH----HHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 346899999999999999999998763 678888754211 11122111000 000110000111
Q ss_pred ---hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022 77 ---EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 77 ---~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~~~~~~~~~~ 143 (332)
+.+...|++|++||..... +.+ ....+..|....-.+ .+.+.+.. +.+.++++|.-...
T Consensus 78 ~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~g~iv~isS~~~~------- 149 (253)
T PRK08993 78 RAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQG-NGGKIINIASMLSF------- 149 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC-CCeEEEEECchhhc-------
Confidence 1234689999999975321 122 334456666544434 44443332 23567776642211
Q ss_pred hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+..-.++.++.--..+-+.+++.+. +..|+
T Consensus 150 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~ 182 (253)
T PRK08993 150 --QGGIRVPSYTASKSGVMGVTRLMANEWA--KHNIN 182 (253)
T ss_pred --cCCCCCcchHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence 1111111345555544455666666654 34554
No 260
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.34 E-value=0.0029 Score=57.89 Aligned_cols=69 Identities=19% Similarity=0.338 Sum_probs=46.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
+||+||| +|.||++++..|+..+... +.+|..+|+++ +.++ .+.+. . .+....+..+.+++||+|
T Consensus 3 ~~IgfIG-~G~MG~aia~~L~~~g~~~---~~~I~v~~r~~--~~~~----~l~~~-~----g~~~~~~~~e~~~~aDiI 67 (272)
T PRK12491 3 KQIGFIG-CGNMGIAMIGGMINKNIVS---PDQIICSDLNV--SNLK----NASDK-Y----GITITTNNNEVANSADIL 67 (272)
T ss_pred CeEEEEC-ccHHHHHHHHHHHHCCCCC---CceEEEECCCH--HHHH----HHHHh-c----CcEEeCCcHHHHhhCCEE
Confidence 4799999 7999999999999876422 12689999863 3332 12211 0 123345566778999999
Q ss_pred EEeC
Q 020022 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 68 iLav 71 (272)
T PRK12491 68 ILSI 71 (272)
T ss_pred EEEe
Confidence 9984
No 261
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.33 E-value=0.00059 Score=61.36 Aligned_cols=112 Identities=15% Similarity=0.137 Sum_probs=62.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcC-CccceEe-eCChhhhc-
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP-LLKGVVA-TTDAVEAC- 79 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~-~~~~~~~-~~~~~~al- 79 (332)
.++||.|+||+|++|+.++..|+..+. +|+++.++. +.+... +.+. ... ...++.. .....+++
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-------~V~~~~R~~--~~~~~~---~~~~~~~~~~~~Dl~d~~~~l~~~~~ 83 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-------AVKAGVRDV--DKAKTS---LPQDPSLQIVRADVTEGSDKLVEAIG 83 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-------EEEEEecCH--HHHHHh---cccCCceEEEEeeCCCCHHHHHHHhh
Confidence 357999999999999999999988653 677766653 222111 1100 000 0001100 01234556
Q ss_pred CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
.++|+||+++|.....+. .+....|......+.+.+.+... .+++++|
T Consensus 84 ~~~d~vi~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~--~~iV~iS 131 (251)
T PLN00141 84 DDSDAVICATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGV--TRFILVS 131 (251)
T ss_pred cCCCEEEECCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCC--CEEEEEc
Confidence 689999999886432211 11123455556677777776542 3555554
No 262
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.32 E-value=0.0013 Score=52.84 Aligned_cols=102 Identities=17% Similarity=0.108 Sum_probs=53.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEE-eCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHML-DIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~-D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
.+||+||| +|.||.+|+..|...|. +|.-+ .++. + ....+.+.. ..... .+..+.++.+|
T Consensus 10 ~l~I~iIG-aGrVG~~La~aL~~ag~-------~v~~v~srs~--~----sa~~a~~~~----~~~~~-~~~~~~~~~aD 70 (127)
T PF10727_consen 10 RLKIGIIG-AGRVGTALARALARAGH-------EVVGVYSRSP--A----SAERAAAFI----GAGAI-LDLEEILRDAD 70 (127)
T ss_dssp --EEEEEC-TSCCCCHHHHHHHHTTS-------EEEEESSCHH-------HHHHHHC------TT------TTGGGCC-S
T ss_pred ccEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEEeCCc--c----ccccccccc----ccccc-cccccccccCC
Confidence 48999999 69999999999998763 45444 3331 1 112222111 11112 24668889999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh--cCCCeEEEEec--CcccchHHHH
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH--AAPNCKVLVVA--NPANTNALIL 141 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~--~~~~~~viv~t--NP~~~~~~~~ 141 (332)
++|++. ++. .+.+++++|..+ -.|+.+|+-.| -+++++..+.
T Consensus 71 lv~iav-----pDd-----------aI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~~ 116 (127)
T PF10727_consen 71 LVFIAV-----PDD-----------AIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPAR 116 (127)
T ss_dssp EEEE-S------CC-----------HHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHHH
T ss_pred EEEEEe-----chH-----------HHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhHH
Confidence 999994 221 245677777765 22454444443 3566666643
No 263
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0031 Score=55.67 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=29.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
||+.|+||+|.+|++++..|+..|. +++++++++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~-------~v~~~~r~~ 34 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH-------KVTLVGARR 34 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 4799999999999999999998763 788998874
No 264
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.014 Score=53.01 Aligned_cols=154 Identities=14% Similarity=0.113 Sum_probs=79.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC----------
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---------- 74 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---------- 74 (332)
+++.|+||+|.+|..++..|+..|. .+.++++++ +.++....++..........+... ++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-------~vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 71 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-------ELFLTDRDA--DGLAQTVADARALGGTVPEHRALDISDYDAVAAFAAD 71 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH
Confidence 4799999999999999999998763 688998874 333323233322110000001110 11
Q ss_pred hhhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHH----HHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022 75 AVEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 75 ~~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~----i~~~~~~~~~viv~tNP~~~~~~~~~~~ 144 (332)
..+.+...|+||+.+|..... ..+. ...+..|+.....+.+. +.+.. +.+.++++|.....
T Consensus 72 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~g~ii~isS~~~~-------- 142 (272)
T PRK07832 72 IHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAG-RGGHLVNVSSAAGL-------- 142 (272)
T ss_pred HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCcEEEEEcccccc--------
Confidence 112245689999999875321 1222 23456666544444444 33322 23567777654321
Q ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.|....++.+......+...++..+. +.+|+
T Consensus 143 -~~~~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~i~ 175 (272)
T PRK07832 143 -VALPWHAAYSASKFGLRGLSEVLRFDLA--RHGIG 175 (272)
T ss_pred -CCCCCCcchHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence 1222222344454444445555655443 34455
No 265
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.31 E-value=0.0029 Score=56.40 Aligned_cols=116 Identities=18% Similarity=0.195 Sum_probs=63.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeC-------Ch
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATT-------DA 75 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~-------~~ 75 (332)
++|.|+||+|++|+.++..|+..|. +++++++++ +..+....++....... ..++.-.. ..
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-------NVVVNDLGE--AGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAA 72 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 4799999999999999999998763 789999874 22322222222111000 00000000 12
Q ss_pred hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecC
Q 020022 76 VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVAN 132 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tN 132 (332)
.+.+.+.|+||+.+|..... ..+. ...+..|......+.+.+ ++.. ...++++|.
T Consensus 73 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~~~v~~ss 137 (255)
T TIGR01963 73 AAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG--WGRIINIAS 137 (255)
T ss_pred HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEEcc
Confidence 23456789999999864311 1122 233455665544444443 4443 235666654
No 266
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.30 E-value=0.0019 Score=57.13 Aligned_cols=30 Identities=37% Similarity=0.357 Sum_probs=25.1
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhccc
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVM 30 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~ 30 (332)
|+. ++++|.|+||+|.+|+.++..|++.|.
T Consensus 1 ~~~~~~~~vlItGasg~iG~~l~~~l~~~g~ 31 (249)
T PRK12825 1 MGSLMGRVALVTGAARGLGRAIALRLARAGA 31 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCC
Confidence 443 456899999999999999999998764
No 267
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.30 E-value=0.0013 Score=60.73 Aligned_cols=63 Identities=24% Similarity=0.337 Sum_probs=45.4
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEE
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAV 86 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi 86 (332)
||+||| .|.+|+.++..|+..|. +|.++|+++ ++++ .+.+.. ....++..+++++||+||
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~-------~V~~~dr~~--~~~~----~~~~~g------~~~~~~~~~~~~~aDivi 60 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGY-------QLHVTTIGP--EVAD----ELLAAG------AVTAETARQVTEQADVIF 60 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHCC------CcccCCHHHHHhcCCEEE
Confidence 599999 79999999999998763 799999874 3332 122211 112345678899999999
Q ss_pred EeC
Q 020022 87 MVG 89 (332)
Q Consensus 87 ~~a 89 (332)
++.
T Consensus 61 ~~v 63 (291)
T TIGR01505 61 TMV 63 (291)
T ss_pred Eec
Confidence 984
No 268
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0062 Score=54.00 Aligned_cols=117 Identities=21% Similarity=0.254 Sum_probs=65.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC--chhhhhhhHHHHhhhhcCCccceEe-eC------C
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVA-TT------D 74 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~--~~~~l~~~~~dl~~~~~~~~~~~~~-~~------~ 74 (332)
+.++|.|+||+|++|++++..|+..|. ++++++... +++.++....++... ..++.. .. .
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~ 73 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGA-------DVIVLDIHPMRGRAEADAVAAGIEAA----GGKALGLAFDVRDFAA 73 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEcCcccccHHHHHHHHHHHHhc----CCcEEEEEccCCCHHH
Confidence 457999999999999999999998763 688877532 112222111122111 011111 01 1
Q ss_pred hhhh-------cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHH-----hhcCCCeEEEEecCc
Q 020022 75 AVEA-------CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE-----QHAAPNCKVLVVANP 133 (332)
Q Consensus 75 ~~~a-------l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~-----~~~~~~~~viv~tNP 133 (332)
..++ ....|+||+.+|..... ..+. ...+..|......+.+.+. +.. . ..+++++..
T Consensus 74 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~-~~iv~~sS~ 148 (249)
T PRK12827 74 TRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-G-GRIVNIASV 148 (249)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-C-eEEEEECCc
Confidence 1122 24689999999975421 1222 2345677777777776665 222 2 456666643
No 269
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.29 E-value=0.0027 Score=56.67 Aligned_cols=35 Identities=31% Similarity=0.302 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (332)
..+++.|+||+|++|+.++..|+..|. ++.+++++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-------~v~~~~~~ 41 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-------KVIGFDQA 41 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecc
Confidence 347899999999999999999998764 78888876
No 270
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.29 E-value=0.0014 Score=58.86 Aligned_cols=146 Identities=16% Similarity=0.065 Sum_probs=77.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeC--Chhh----
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATT--DAVE---- 77 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~--~~~~---- 77 (332)
.+++.|+||+|++|++++..|+..|. +++++|+++. ......++....... ......+. +..+
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~-------~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGA-------RVVLVDRSEL---VHEVAAELRAAGGEALALTADLETYAGAQAAMAA 77 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCchH---HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHH
Confidence 46899999999999999999998764 7889998631 111122222110000 00011110 1111
Q ss_pred ---hcCCCcEEEEeCCCCC--CC--CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022 78 ---ACTGVNIAVMVGGFPR--KE--GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 78 ---al~~aDiVi~~ag~~~--~~--~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~ 143 (332)
.+...|++|+.||... .+ ..+.. ..+..|+ ...+.+.+.+.+.. . .+|+++|....
T Consensus 78 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-g~iv~~sS~~~-------- 147 (260)
T PRK12823 78 AVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-G-GAIVNVSSIAT-------- 147 (260)
T ss_pred HHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-CeEEEEcCccc--------
Confidence 1346899999998532 11 12222 2334444 34556666665543 2 45666664221
Q ss_pred hCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 144 FAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
+ + +..-.++.++.-...+.+.+++.+.
T Consensus 148 ~--~-~~~~~Y~~sK~a~~~~~~~la~e~~ 174 (260)
T PRK12823 148 R--G-INRVPYSAAKGGVNALTASLAFEYA 174 (260)
T ss_pred c--C-CCCCccHHHHHHHHHHHHHHHHHhc
Confidence 0 1 1112356666665677777777763
No 271
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.28 E-value=0.0051 Score=55.16 Aligned_cols=157 Identities=16% Similarity=0.101 Sum_probs=80.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEee--CC------
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVAT--TD------ 74 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~--~~------ 74 (332)
..++|.|+||+|.+|++++..|+..|. ++++.+++. +.++....++.+..... ......+ .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-------~vv~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~ 80 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-------SVVVSDINA--DAANHVVDEIQQLGGQAFACRCDITSEQELSALAD 80 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 357999999999999999999998764 688888764 33332333333211000 0001111 01
Q ss_pred -hhhhcCCCcEEEEeCCCCCC--CCCCHHH---HHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCcccchHHHHHHhCC
Q 020022 75 -AVEACTGVNIAVMVGGFPRK--EGMERKD---VMSKNVSIYKAQASALEQHA--APNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 75 -~~~al~~aDiVi~~ag~~~~--~~~~r~~---~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP~~~~~~~~~~~~~ 146 (332)
..+.+...|++|+.+|.... ...+..+ .+..|+.-...+.+.+..+- .+.+.++++|.-... .
T Consensus 81 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~---------~ 151 (255)
T PRK06113 81 FALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE---------N 151 (255)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc---------C
Confidence 11223467999999986432 1223333 35667665555555543221 122456666643221 1
Q ss_pred CCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 147 SIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 147 ~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
+.+....++.+..-...+.+.+++.+. +..|+
T Consensus 152 ~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~i~ 183 (255)
T PRK06113 152 KNINMTSYASSKAAASHLVRNMAFDLG--EKNIR 183 (255)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence 112112344444444455555665543 45565
No 272
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.27 E-value=0.0026 Score=58.99 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=57.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||+||| .|.+|+.++..|+..+. +|.++|+++ ++++. +...... ......+..++++++|+|
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~-------~V~~~dr~~--~~~~~----l~~~g~~---~~~s~~~~~~~~~~~dvI 63 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGH-------DCVGYDHDQ--DAVKA----MKEDRTT---GVANLRELSQRLSAPRVV 63 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHH----HHHcCCc---ccCCHHHHHhhcCCCCEE
Confidence 4899999 79999999999988763 789999984 33322 2221100 000011233456789999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP 133 (332)
+++. | . ..++++++.+.....++.+||..||.
T Consensus 64 i~~v--p---~-----------~~~~~v~~~l~~~l~~g~ivid~st~ 95 (298)
T TIGR00872 64 WVMV--P---H-----------GIVDAVLEELAPTLEKGDIVIDGGNS 95 (298)
T ss_pred EEEc--C---c-----------hHHHHHHHHHHhhCCCCCEEEECCCC
Confidence 9983 1 1 12334444555554456667777764
No 273
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.26 E-value=0.001 Score=61.47 Aligned_cols=167 Identities=15% Similarity=0.085 Sum_probs=89.1
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-c-CCccceEeeCChhhhcC--CC
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-F-PLLKGVVATTDAVEACT--GV 82 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~-~~~~~~~~~~~~~~al~--~a 82 (332)
||.|+||+|++|+.++..|+..+. ++.++|.... .... ....+.... . ....++.......++++ +.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~-------~V~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH-------EVVVLDNLSN-GSPE-ALKRGERITRVTFVEGDLRDRELLDRLFEEHKI 71 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC-------eEEEEeCCCc-cchh-hhhhhccccceEEEECCCCCHHHHHHHHHhCCC
Confidence 689999999999999999988753 6778875421 1111 001111100 0 00001111112233443 68
Q ss_pred cEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHH------HHHhCCCCCCCcEE
Q 020022 83 NIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALI------LKEFAPSIPAKNIT 154 (332)
Q Consensus 83 DiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~------~~~~~~~~~~~~i~ 154 (332)
|+||+++|..... .....+.+..|+.....+++.+.+... ..++++|. .. .+. ..+- ....+...+
T Consensus 72 d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~ss-~~--~~g~~~~~~~~e~-~~~~~~~~y 145 (328)
T TIGR01179 72 DAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGV--KKFIFSSS-AA--VYGEPSSIPISED-SPLGPINPY 145 (328)
T ss_pred cEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCC--CEEEEecc-hh--hcCCCCCCCcccc-CCCCCCCch
Confidence 9999999865322 123345677899999999998887652 24555543 11 010 0000 001112234
Q ss_pred EechHHHHHHHHHHHHH-cCCCCCCeeeeEEEecc
Q 020022 155 CLTRLDHNRALGQISEK-LNVQVSDVKNVIIWGNH 188 (332)
Q Consensus 155 ~~t~lds~r~~~~la~~-l~v~~~~v~~~~v~G~h 188 (332)
+.+.....++...+++. .+++..-++...++|.+
T Consensus 146 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~ 180 (328)
T TIGR01179 146 GRSKLMSERILRDLSKADPGLSYVILRYFNVAGAD 180 (328)
T ss_pred HHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCC
Confidence 55555555655556655 56666666655556653
No 274
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0029 Score=56.69 Aligned_cols=157 Identities=17% Similarity=0.192 Sum_probs=81.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCCh-----
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDA----- 75 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~----- 75 (332)
+.+++.|+||+|.+|.+++..|+..|. +|.+.+++. +.++....++...... ...++....+.
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-------QVAIAARHL--DALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLD 78 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 446899999999999999999998764 789999874 3343333333221100 00011000111
Q ss_pred --hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022 76 --VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 76 --~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~ 143 (332)
.+.+...|++|+.+|..... ..+. ...+..|+.. .+.+.+.+.+.. ....+++++.-.. .
T Consensus 79 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~-------~ 150 (253)
T PRK05867 79 QVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQG-QGGVIINTASMSG-------H 150 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcC-CCcEEEEECcHHh-------c
Confidence 12234789999999875321 1222 2334556544 334444444432 2245555543111 1
Q ss_pred hCCCCCCC-cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 144 FAPSIPAK-NITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 144 ~~~~~~~~-~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
. ...|.. -.++.++.--..+-+.+++.+. +..|+
T Consensus 151 ~-~~~~~~~~~Y~asKaal~~~~~~la~e~~--~~gI~ 185 (253)
T PRK05867 151 I-INVPQQVSHYCASKAAVIHLTKAMAVELA--PHKIR 185 (253)
T ss_pred C-CCCCCCccchHHHHHHHHHHHHHHHHHHh--HhCeE
Confidence 0 111211 1344555555566667776654 34555
No 275
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.25 E-value=0.0018 Score=59.17 Aligned_cols=64 Identities=14% Similarity=0.260 Sum_probs=47.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh-hhcCCccceEeeCChhhhcCCCcE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD-AAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~-~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
+||++|| .|.||+.++..|+..|. +++.||+++ ++. ...+.. .. .......++.++||+
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~-------~v~v~~r~~--~ka---~~~~~~~Ga-------~~a~s~~eaa~~aDv 60 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGH-------EVTVYNRTP--EKA---AELLAAAGA-------TVAASPAEAAAEADV 60 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCC-------EEEEEeCCh--hhh---hHHHHHcCC-------cccCCHHHHHHhCCE
Confidence 4899999 89999999999999874 899999985 332 122222 22 123456789999999
Q ss_pred EEEeC
Q 020022 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||..-
T Consensus 61 Vitmv 65 (286)
T COG2084 61 VITML 65 (286)
T ss_pred EEEec
Confidence 99984
No 276
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0034 Score=56.14 Aligned_cols=119 Identities=21% Similarity=0.208 Sum_probs=63.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChh------
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAV------ 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~------ 76 (332)
..++|.|+||+|.+|++++..|++.|. ++.+.++++. . .....++..... ....++.-..+..
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-------~Vi~~~r~~~--~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-------RVALLDRSED--V-AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAV 83 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCHH--H-HHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence 346899999999999999999998763 7889988742 1 111112211000 0000110001111
Q ss_pred -hhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecC
Q 020022 77 -EACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASALEQHA--APNCKVLVVAN 132 (332)
Q Consensus 77 -~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tN 132 (332)
+.+...|+||+.+|...... .+. ...+..|+.....+.+.+..+. .+..+++++|.
T Consensus 84 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 148 (255)
T PRK06841 84 ISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS 148 (255)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 12346799999998753211 122 2345666665555555544321 01346666664
No 277
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0095 Score=53.19 Aligned_cols=37 Identities=24% Similarity=0.177 Sum_probs=31.5
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
.+.++|.|+||+|++|.+++..|+..|. .+.++|++.
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~-------~Vi~~~r~~ 42 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGA-------HVIVSSRKL 42 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 3457899999999999999999998763 689999874
No 278
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0014 Score=58.88 Aligned_cols=119 Identities=16% Similarity=0.113 Sum_probs=62.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe----eCChhhh-
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA----TTDAVEA- 78 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~----~~~~~~a- 78 (332)
+.+++.|+||+|++|.+++..|+..|. .+++.+... .+.+......+.+.. ....-+.. ..+..++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~ 78 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-------DVAVHYNRS-RDEAEALAAEIRALG-RRAVALQADLADEAEVRALV 78 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHH
Confidence 356899999999999999999988763 566666532 222222222221111 00000111 0111122
Q ss_pred ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcC--CCeEEEEec
Q 020022 79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAA--PNCKVLVVA 131 (332)
Q Consensus 79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~--~~~~viv~t 131 (332)
+...|+||+.||..... ..+ ....+..|+.-...+.+.+..+.. ....+++++
T Consensus 79 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~ 145 (258)
T PRK09134 79 ARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMI 145 (258)
T ss_pred HHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence 23479999999874321 122 234566777655555555444321 124455543
No 279
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=97.23 E-value=0.002 Score=59.62 Aligned_cols=64 Identities=22% Similarity=0.453 Sum_probs=46.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
+||+||| .|.+|..++..|+..|. +|..||+++ ++++ .+... ......+..+++++||+|
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~-------~V~v~d~~~--~~~~----~~~~~------g~~~~~s~~~~~~~aDvV 61 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGH-------QLQVFDVNP--QAVD----ALVDK------GATPAASPAQAAAGAEFV 61 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHc------CCcccCCHHHHHhcCCEE
Confidence 4899999 79999999999998763 799999874 3332 22221 112334567888999999
Q ss_pred EEeC
Q 020022 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 62 i~~v 65 (296)
T PRK15461 62 ITML 65 (296)
T ss_pred EEec
Confidence 9984
No 280
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=97.23 E-value=0.004 Score=57.92 Aligned_cols=120 Identities=13% Similarity=0.194 Sum_probs=66.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH----HhhhhcCCccceEeeCChhhhcC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME----LVDAAFPLLKGVVATTDAVEACT 80 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d----l~~~~~~~~~~~~~~~~~~~al~ 80 (332)
.|||+|+| +|.||+.++..|...|. ++.|+++.. +.++....+ +.+.... ..+.......+...
T Consensus 2 ~m~I~IiG-aGaiG~~~a~~L~~~G~-------~V~lv~r~~--~~~~~i~~~~Gl~i~~~g~~--~~~~~~~~~~~~~~ 69 (305)
T PRK05708 2 SMTWHILG-AGSLGSLWACRLARAGL-------PVRLILRDR--QRLAAYQQAGGLTLVEQGQA--SLYAIPAETADAAE 69 (305)
T ss_pred CceEEEEC-CCHHHHHHHHHHHhCCC-------CeEEEEech--HHHHHHhhcCCeEEeeCCcc--eeeccCCCCccccc
Confidence 46899999 69999999999998763 689999863 222211110 1000000 01111111123346
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcEEEe
Q 020022 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL 156 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i~~~ 156 (332)
..|+||++.-.. . ..+..+.+..+..++..++.+-|=++....+.. + ++.+++.++
T Consensus 70 ~~D~viv~vK~~------------~----~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l~~-~---~~~~~v~~g 125 (305)
T PRK05708 70 PIHRLLLACKAY------------D----AEPAVASLAHRLAPGAELLLLQNGLGSQDAVAA-R---VPHARCIFA 125 (305)
T ss_pred ccCEEEEECCHH------------h----HHHHHHHHHhhCCCCCEEEEEeCCCCCHHHHHH-h---CCCCcEEEE
Confidence 789999984211 1 223444555554467777788887765444433 2 354555444
No 281
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.23 E-value=0.0024 Score=56.81 Aligned_cols=117 Identities=17% Similarity=0.169 Sum_probs=64.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh---
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA--- 78 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a--- 78 (332)
.++|.|+||+|++|++++..|+..|. ++.++|++. +.......++....... ..++.......++
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 73 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA-------KVAVFDLNR--EAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAA 73 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEecCCH--HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 46899999999999999999998764 789999874 33332223332211000 0011000011122
Q ss_pred ----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecC
Q 020022 79 ----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVAN 132 (332)
Q Consensus 79 ----l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tN 132 (332)
+...|+||+.+|..... ..+. ...+..|+.....+.+.+. +.. ...+++++.
T Consensus 74 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~iss 139 (250)
T TIGR03206 74 AEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG--AGRIVNIAS 139 (250)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEECc
Confidence 23589999999864221 1222 2335667665555544443 332 245666664
No 282
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.018 Score=51.63 Aligned_cols=39 Identities=23% Similarity=0.255 Sum_probs=32.0
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCC
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPP 46 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~ 46 (332)
|+. +.++|.|+||+|.+|+.++..|+..|. + |.++++++
T Consensus 1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~-------~~V~~~~r~~ 41 (260)
T PRK06198 1 MGRLDGKVALVTGGTQGLGAAIARAFAERGA-------AGLVICGRNA 41 (260)
T ss_pred CCCCCCcEEEEeCCCchHHHHHHHHHHHCCC-------CeEEEEcCCH
Confidence 544 457899999999999999999998763 4 88999864
No 283
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.22 E-value=0.0039 Score=49.92 Aligned_cols=73 Identities=22% Similarity=0.209 Sum_probs=46.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
|||+|+|++|.||+.++..+....- .+ +..+|.+++ + .. ..|+.+........+.++.++.+.++.+|+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~------~~lv~~v~~~~~-~-~~--g~d~g~~~~~~~~~~~v~~~l~~~~~~~DV 70 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPG------FELVGAVDRKPS-A-KV--GKDVGELAGIGPLGVPVTDDLEELLEEADV 70 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTT------EEEEEEEETTTS-T-TT--TSBCHHHCTSST-SSBEBS-HHHHTTH-SE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCC------cEEEEEEecCCc-c-cc--cchhhhhhCcCCcccccchhHHHhcccCCE
Confidence 5899999779999999999988431 14 456666531 1 21 234433322223455566788899999999
Q ss_pred EEEe
Q 020022 85 AVMV 88 (332)
Q Consensus 85 Vi~~ 88 (332)
||-.
T Consensus 71 vIDf 74 (124)
T PF01113_consen 71 VIDF 74 (124)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9887
No 284
>PRK08589 short chain dehydrogenase; Validated
Probab=97.22 E-value=0.003 Score=57.42 Aligned_cols=156 Identities=13% Similarity=0.098 Sum_probs=82.3
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeC--Chh
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATT--DAV 76 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~--~~~ 76 (332)
|+. +.+++.|+||+|.+|.+++..|+..|. ++.++++++ .+.....++.+..... ......+. +..
T Consensus 1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~-------~vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 70 (272)
T PRK08589 1 MKRLENKVAVITGASTGIGQASAIALAQEGA-------YVLAVDIAE---AVSETVDKIKSNGGKAKAYHVDISDEQQVK 70 (272)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCcH---HHHHHHHHHHhcCCeEEEEEeecCCHHHHH
Confidence 553 356899999999999999999998764 788998872 2332333333211000 00111110 111
Q ss_pred -------hhcCCCcEEEEeCCCCCCCC----CCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022 77 -------EACTGVNIAVMVGGFPRKEG----MER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNA 138 (332)
Q Consensus 77 -------~al~~aDiVi~~ag~~~~~~----~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~ 138 (332)
+.+...|++|+.||.....+ .+. ...+..|+. +.+.+.+.+.+. ++.+|+++.....
T Consensus 71 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~-- 145 (272)
T PRK08589 71 DFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ---GGSIINTSSFSGQ-- 145 (272)
T ss_pred HHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CCEEEEeCchhhc--
Confidence 12345799999999753221 122 223344543 445555555433 2567777653321
Q ss_pred HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+..-.++.++.--..+.+.+++.++ +..|+
T Consensus 146 -------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~ 178 (272)
T PRK08589 146 -------AADLYRSGYNAAKGAVINFTKSIAIEYG--RDGIR 178 (272)
T ss_pred -------CCCCCCchHHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 1112111344444444566777777664 34565
No 285
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.21 E-value=0.0022 Score=60.35 Aligned_cols=90 Identities=17% Similarity=0.207 Sum_probs=57.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.+||+||| .|.+|+.++..|...|. +|..||+.+. .. .+. . ....+..+++++||+
T Consensus 146 g~~VgIIG-~G~IG~~vA~~L~~~G~-------~V~~~d~~~~--~~----~~~---~-------~~~~~l~ell~~aDi 201 (330)
T PRK12480 146 NMTVAIIG-TGRIGAATAKIYAGFGA-------TITAYDAYPN--KD----LDF---L-------TYKDSVKEAIKDADI 201 (330)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEeCChh--Hh----hhh---h-------hccCCHHHHHhcCCE
Confidence 36999999 79999999999987653 7999998741 11 111 0 122467889999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
|++..-... .+...+ .+.+-...++++++|+++-
T Consensus 202 Vil~lP~t~-----------~t~~li---~~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 202 ISLHVPANK-----------ESYHLF---DKAMFDHVKKGAILVNAAR 235 (330)
T ss_pred EEEeCCCcH-----------HHHHHH---hHHHHhcCCCCcEEEEcCC
Confidence 999853221 111111 2223333457788888874
No 286
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=97.21 E-value=0.0016 Score=59.64 Aligned_cols=94 Identities=10% Similarity=0.128 Sum_probs=56.5
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh---hhHHHHhhhhcCCccceEeeCChhhhc----
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN---GVKMELVDAAFPLLKGVVATTDAVEAC---- 79 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~---~~~~dl~~~~~~~~~~~~~~~~~~~al---- 79 (332)
||.|+||+|++|++++..|+..|. +++...+++...... ....|+.| ...+.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-------~V~~~~R~~~~~~~~~~~~~~~d~~d-----------~~~l~~a~~~~~ 62 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-------PFLVASRSSSSSAGPNEKHVKFDWLD-----------EDTWDNPFSSDD 62 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-------cEEEEeCCCccccCCCCccccccCCC-----------HHHHHHHHhccc
Confidence 589999999999999999988763 688888875211100 01112221 12344555
Q ss_pred --CC-CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 80 --TG-VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 80 --~~-aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
++ +|.|++.++... .. .+..+.+++..++.+.+ +|+..|
T Consensus 63 ~~~g~~d~v~~~~~~~~----~~-------~~~~~~~i~aa~~~gv~--~~V~~S 104 (285)
T TIGR03649 63 GMEPEISAVYLVAPPIP----DL-------APPMIKFIDFARSKGVR--RFVLLS 104 (285)
T ss_pred CcCCceeEEEEeCCCCC----Ch-------hHHHHHHHHHHHHcCCC--EEEEee
Confidence 67 999998865321 11 13345666777666532 455555
No 287
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.004 Score=55.74 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=62.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEee--CChhhhcC-C
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVAT--TDAVEACT-G 81 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~--~~~~~al~-~ 81 (332)
++|.|+||+|.+|++++..|+..|. ++++.++++ +.+.....+........ ......+ .....++. +
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH-------NVIAGVQIA--PQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWD 73 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCC
Confidence 4799999999999999999998763 677887763 22221111111110000 0001111 12233444 7
Q ss_pred CcEEEEeCCCCCCC---CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022 82 VNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 82 aDiVi~~ag~~~~~---~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.|+||+.+|..... ..+.+ ..+..|+. ..+.+.+.+.+.. . ..+|++|.
T Consensus 74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-~~iv~~SS 132 (257)
T PRK09291 74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-K-GKVVFTSS 132 (257)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-ceEEEEcC
Confidence 99999999975421 11222 23344544 3344445554443 2 46777764
No 288
>PRK09242 tropinone reductase; Provisional
Probab=97.20 E-value=0.003 Score=56.66 Aligned_cols=153 Identities=16% Similarity=0.180 Sum_probs=81.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeCC--------
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATTD-------- 74 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~~-------- 74 (332)
..+++.|+||+|.+|..++..|+..|. +|.+.+++. +.++....++.... +. .++. ...|
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~~~ 76 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-------DVLIVARDA--DALAQARDELAEEF-PE-REVHGLAADVSDDEDRR 76 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhC-CC-CeEEEEECCCCCHHHHH
Confidence 346899999999999999999998764 789999874 34443333343221 00 0111 0111
Q ss_pred -----hhhhcCCCcEEEEeCCCCCC-C--CCCHH---HHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecCcccchHH
Q 020022 75 -----AVEACTGVNIAVMVGGFPRK-E--GMERK---DVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVANPANTNAL 139 (332)
Q Consensus 75 -----~~~al~~aDiVi~~ag~~~~-~--~~~r~---~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tNP~~~~~~ 139 (332)
..+.+...|+||+++|.... + ..+.+ ..+..|+.-...+ .+.+++.. ...++++|.-...
T Consensus 77 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~ii~~sS~~~~--- 151 (257)
T PRK09242 77 AILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA--SSAIVNIGSVSGL--- 151 (257)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CceEEEECccccC---
Confidence 12234568999999987421 1 12222 3345565544444 44444432 3456666643221
Q ss_pred HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+..-.++.+..-...+-..++..+. +..++
T Consensus 152 ------~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~ 184 (257)
T PRK09242 152 ------THVRSGAPYGMTKAALLQMTRNLAVEWA--EDGIR 184 (257)
T ss_pred ------CCCCCCcchHHHHHHHHHHHHHHHHHHH--HhCeE
Confidence 1112222345555555566666665543 33454
No 289
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0059 Score=52.60 Aligned_cols=105 Identities=17% Similarity=0.173 Sum_probs=59.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|++.|+||+|.+|.+++..|+.. . ++.+.++++ +. ...|+.+.... ....+.+...|++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~-------~vi~~~r~~--~~---~~~D~~~~~~~--------~~~~~~~~~id~l 59 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H-------EVITAGRSS--GD---VQVDITDPASI--------RALFEKVGKVDAV 59 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C-------cEEEEecCC--Cc---eEecCCChHHH--------HHHHHhcCCCCEE
Confidence 47999999999999999999875 2 688888763 11 12344332100 0011223468999
Q ss_pred EEeCCCCCCC---CCCHHH---HHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 86 VMVGGFPRKE---GMERKD---VMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 86 i~~ag~~~~~---~~~r~~---~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
|+.+|..... +.+.++ .+..|+.....+.+....+-.+...++++|
T Consensus 60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 9999974311 123332 344555544444444433322234555655
No 290
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.018 Score=50.98 Aligned_cols=154 Identities=16% Similarity=0.114 Sum_probs=80.0
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEeeC----
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVATT---- 73 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~~---- 73 (332)
|.. +.++|.|+||+|++|.+++..|+..|. .|+++++++ +.++....++........ .......
T Consensus 1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~ 71 (239)
T PRK08703 1 MATLSDKTILVTGASQGLGEQVAKAYAAAGA-------TVILVARHQ--KKLEKVYDAIVEAGHPEPFAIRFDLMSAEEK 71 (239)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHcCC-------EEEEEeCCh--HHHHHHHHHHHHcCCCCcceEEeeecccchH
Confidence 544 347899999999999999999998763 789999875 333333233321110000 0111110
Q ss_pred C-------hhhhc-CCCcEEEEeCCCCC--CC--CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022 74 D-------AVEAC-TGVNIAVMVGGFPR--KE--GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPA 134 (332)
Q Consensus 74 ~-------~~~al-~~aDiVi~~ag~~~--~~--~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~ 134 (332)
+ ..+.+ ...|+||+.||... .+ ..+.+ ..+..|+. +.+.+.+.+.+.. .+.+++++...
T Consensus 72 ~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--~~~iv~~ss~~ 149 (239)
T PRK08703 72 EFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP--DASVIFVGESH 149 (239)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC--CCEEEEEeccc
Confidence 1 11112 46799999999642 11 12222 23455664 3445555554443 24566655422
Q ss_pred cchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCC
Q 020022 135 NTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNV 174 (332)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v 174 (332)
.. .+.+....++.++.-...+-+.++..++-
T Consensus 150 ~~---------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~ 180 (239)
T PRK08703 150 GE---------TPKAYWGGFGASKAALNYLCKVAADEWER 180 (239)
T ss_pred cc---------cCCCCccchHHhHHHHHHHHHHHHHHhcc
Confidence 11 01111112444555445666666776653
No 291
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.19 E-value=0.0044 Score=55.14 Aligned_cols=39 Identities=23% Similarity=0.374 Sum_probs=32.7
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
|..+.+++.|+||+|.+|+.++..|+..|. ++.++|+++
T Consensus 1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~-------~vi~~~r~~ 39 (253)
T PRK08217 1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGA-------KLALIDLNQ 39 (253)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 655567999999999999999999988763 688899874
No 292
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0052 Score=57.81 Aligned_cols=150 Identities=15% Similarity=0.096 Sum_probs=79.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEee--CChhhh--
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVAT--TDAVEA-- 78 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~--~~~~~a-- 78 (332)
..++|.|+||+|.+|.+++..|+..|. +|+++++++ +.++....++....... .....++ .+..++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-------~Vvl~~R~~--~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~ 76 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-------RLVLAARDE--EALQAVAEECRALGAEVLVVPTDVTDADQVKALAT 76 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence 457899999999999999999998874 789999874 44543333333211000 0011111 111111
Q ss_pred -----cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022 79 -----CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 79 -----l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~ 143 (332)
+...|++|+.||+.... ..+. ...+..|.- ..+.+.+.+.+.. .+.+|+++.-...
T Consensus 77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~--~g~iV~isS~~~~------- 147 (330)
T PRK06139 77 QAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG--HGIFINMISLGGF------- 147 (330)
T ss_pred HHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC--CCEEEEEcChhhc-------
Confidence 24679999999975321 1222 234555554 3344555555543 2456666542211
Q ss_pred hCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 144 FAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
.+.|..-.++.++.-...|-..++..+.
T Consensus 148 --~~~p~~~~Y~asKaal~~~~~sL~~El~ 175 (330)
T PRK06139 148 --AAQPYAAAYSASKFGLRGFSEALRGELA 175 (330)
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHHhC
Confidence 1122212344444444455556666554
No 293
>KOG2711 consensus Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase [Energy production and conversion]
Probab=97.18 E-value=0.0089 Score=55.29 Aligned_cols=109 Identities=23% Similarity=0.322 Sum_probs=67.1
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhh---HHHH---hhhhc------CCccceE
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGV---KMEL---VDAAF------PLLKGVV 70 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~---~~dl---~~~~~------~~~~~~~ 70 (332)
+.+.||+|+| +|+=|++++..+...-.-.+....+|+..-..+ ...+. ..|. .|... .++.++.
T Consensus 19 ~~~~kV~ivG-sGnWGsaiaki~~~n~~~~~~f~~~Vrmwv~ee---~i~~~~~~L~eiIN~~heN~KYlpg~~lP~Nvv 94 (372)
T KOG2711|consen 19 RDPLKVCIVG-SGNWGSAIAKIVGENVKEFPIFDPQVRMWVFEE---EINGEAEKLTEIINSRHENVKYLPGIKLPENVV 94 (372)
T ss_pred cCceEEEEEc-cChHHHHHHHHHhhhhhhccccCceeeEEEecc---ccCChhHHHHHHhccccccccccCCccCCCCeE
Confidence 4568999999 799999999887653211111112455554432 23331 1111 11111 1346788
Q ss_pred eeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 71 ATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 71 ~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
..+|+.++++|||++|+.. | - +.+.+++++|..+-+|++..|-.+
T Consensus 95 Av~dl~ea~~dADilvf~v--P---h-----------Qf~~~ic~~l~g~vk~~~~aISL~ 139 (372)
T KOG2711|consen 95 AVPDLVEAAKDADILVFVV--P---H-----------QFIPRICEQLKGYVKPGATAISLI 139 (372)
T ss_pred ecchHHHHhccCCEEEEeC--C---h-----------hhHHHHHHHHhcccCCCCeEEEee
Confidence 8899999999999999983 2 1 345578888888877776554443
No 294
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0056 Score=55.07 Aligned_cols=118 Identities=24% Similarity=0.198 Sum_probs=64.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh---
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA--- 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a--- 78 (332)
++|.|+||+|++|+.++..|+..|. ++.++++++ +..+....++.... ....-+... ++ ..++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~ 71 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-------QLVLAARNE--TRLASLAQELADHG-GEALVVPTDVSDAEACERLIEA 71 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHH
Confidence 4799999999999999999988763 788999874 33332222332211 000001110 11 1111
Q ss_pred ----cCCCcEEEEeCCCCCCCC---C-CH---HHHHHhhHHHHHHHHHHHHhhcC-CCeEEEEecCc
Q 020022 79 ----CTGVNIAVMVGGFPRKEG---M-ER---KDVMSKNVSIYKAQASALEQHAA-PNCKVLVVANP 133 (332)
Q Consensus 79 ----l~~aDiVi~~ag~~~~~~---~-~r---~~~~~~n~~i~~~i~~~i~~~~~-~~~~viv~tNP 133 (332)
+.+.|+||+++|...... . +. .+.+..|+.....+.+.+..+.. ....++++|..
T Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~ 138 (263)
T PRK06181 72 AVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSL 138 (263)
T ss_pred HHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 236799999998753221 1 22 23356677666666555543211 12456666653
No 295
>PLN02996 fatty acyl-CoA reductase
Probab=97.16 E-value=0.0069 Score=60.13 Aligned_cols=111 Identities=20% Similarity=0.148 Sum_probs=65.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcc-cCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhh-c-------C--C----cc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALN-GVKMELVDAA-F-------P--L----LK 67 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~-~-------~--~----~~ 67 (332)
+.++|.||||+||+|++++..|+..+ -.+ +|.++.+....+... ....++.+.. + + . ..
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~-----~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~ 84 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVK-----KLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISE 84 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCC-----EEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhc
Confidence 34689999999999999999988642 111 566666543211111 0000111000 0 0 0 01
Q ss_pred ceEe-eCC-------------hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Q 020022 68 GVVA-TTD-------------AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQH 120 (332)
Q Consensus 68 ~~~~-~~~-------------~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~ 120 (332)
++.. ..| ..+.++++|+|||+|+... ...+..+....|+...+++.+...+.
T Consensus 85 kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 150 (491)
T PLN02996 85 KVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKC 150 (491)
T ss_pred CEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 2211 111 2345678999999998654 23455667788999999999988775
No 296
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=97.13 E-value=0.0038 Score=55.01 Aligned_cols=118 Identities=19% Similarity=0.198 Sum_probs=65.3
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhhc-----
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEAC----- 79 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~al----- 79 (332)
|.|+|++|++|+.++..|+..|. ++.+.+++. .+.+.....++.+..... ..++.......+++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA-------KVIITYRSS-EEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEE 72 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCc-hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 46999999999999999998763 688888764 122322223332211000 00111111112222
Q ss_pred --CCCcEEEEeCCCCCCC---CC---CHHHHHHhhHHHHHHHHHHHHhhc--CCCeEEEEecCc
Q 020022 80 --TGVNIAVMVGGFPRKE---GM---ERKDVMSKNVSIYKAQASALEQHA--APNCKVLVVANP 133 (332)
Q Consensus 80 --~~aDiVi~~ag~~~~~---~~---~r~~~~~~n~~i~~~i~~~i~~~~--~~~~~viv~tNP 133 (332)
...|+||+.+|..... +. .....+..|......+.+.+.++. .+...++++|..
T Consensus 73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 136 (239)
T TIGR01830 73 ELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV 136 (239)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 3469999999875321 11 223456677777666766665542 123456666654
No 297
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0062 Score=54.57 Aligned_cols=147 Identities=20% Similarity=0.145 Sum_probs=74.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhc-----
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEAC----- 79 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al----- 79 (332)
+++.|+||+|++|..++..|+..|. ++.+++++. +.++....++..... .....+.-..+...++
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD-------RVLALDIDA--AALAAFADALGDARFVPVACDLTDAASLAAALANAAA 73 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4799999999999999999998763 789999874 333222222211000 0000000001111222
Q ss_pred --CCCcEEEEeCCCCCCCC---CCHHH---HHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcccchHHHHHHhCCC
Q 020022 80 --TGVNIAVMVGGFPRKEG---MERKD---VMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEFAPS 147 (332)
Q Consensus 80 --~~aDiVi~~ag~~~~~~---~~r~~---~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~~~~~~~~~~~~~~ 147 (332)
.+.|+||+.+|...... .+.++ .+..|......+.+.+ .+.. ...++++|..... .. .+
T Consensus 74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~------~~-~~ 144 (257)
T PRK07074 74 ERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS--RGAVVNIGSVNGM------AA-LG 144 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEEcchhhc------CC-CC
Confidence 35799999998753221 22222 2345555444444443 3322 3456666652211 00 11
Q ss_pred CCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 148 IPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 148 ~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
. ..++.+..-..++.+.+++.++
T Consensus 145 ~---~~y~~sK~a~~~~~~~~a~~~~ 167 (257)
T PRK07074 145 H---PAYSAAKAGLIHYTKLLAVEYG 167 (257)
T ss_pred C---cccHHHHHHHHHHHHHHHHHHh
Confidence 1 1345555555566677777665
No 298
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=97.12 E-value=0.0066 Score=53.62 Aligned_cols=154 Identities=14% Similarity=0.162 Sum_probs=76.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhh----hhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEA----LNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~----l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~ 81 (332)
|+|.|+||+|.+|++++..|+..+. + ..+.+.+++...+. +.-...|+.+... . ....+.+..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~-~----~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~~-------~-~~~~~~~~~ 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYP-D----ATVHATYRHHKPDFQHDNVQWHALDVTDEAE-------I-KQLSEQFTQ 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCC-C----CEEEEEccCCccccccCceEEEEecCCCHHH-------H-HHHHHhcCC
Confidence 4899999999999999999988642 1 14666665431110 0001122221110 0 012344678
Q ss_pred CcEEEEeCCCCCCC---------CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhC
Q 020022 82 VNIAVMVGGFPRKE---------GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFA 145 (332)
Q Consensus 82 aDiVi~~ag~~~~~---------~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~ 145 (332)
.|++|+++|..... +.+.+ ..+..|+ .+.+.+.+.+++.. ...++++|-...... .
T Consensus 68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~--~~~i~~iss~~~~~~----~-- 139 (235)
T PRK09009 68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE--SAKFAVISAKVGSIS----D-- 139 (235)
T ss_pred CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC--CceEEEEeecccccc----c--
Confidence 99999999975321 11222 2233443 44555555554432 245666653222110 0
Q ss_pred CCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 146 PSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 146 ~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
..++....++.++.--..+-+.++..+.-...+++
T Consensus 140 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~ 174 (235)
T PRK09009 140 NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGV 174 (235)
T ss_pred CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeE
Confidence 01121123444555445666667766553223454
No 299
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=97.11 E-value=0.0087 Score=56.58 Aligned_cols=115 Identities=19% Similarity=0.219 Sum_probs=68.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH--------HHHhhhh--cCCccceEeeCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK--------MELVDAA--FPLLKGVVATTD 74 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~--------~dl~~~~--~~~~~~~~~~~~ 74 (332)
.++|+|+| .|+||..+|-.++..|. .+.-+|+++ .+..... -++...- .-...+++.+++
T Consensus 9 ~~~I~ViG-LGYVGLPlA~~fA~~G~-------~ViG~DIn~--~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lraTtd 78 (436)
T COG0677 9 SATIGVIG-LGYVGLPLAAAFASAGF-------KVIGVDINQ--KKVDKLNRGESYIEEPDLDEVVKEAVESGKLRATTD 78 (436)
T ss_pred ceEEEEEc-cccccHHHHHHHHHcCC-------ceEeEeCCH--HHHHHHhCCcceeecCcHHHHHHHHHhcCCceEecC
Confidence 47999999 99999999999998874 689999985 2222110 0111000 001245777776
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEE-ecCcccc
Q 020022 75 AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLV-VANPANT 136 (332)
Q Consensus 75 ~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv-~tNP~~~ 136 (332)
. +.++.||++|++.-.|.+...+ -.+..+.+-++.|.++-.++..||+ .|-|...
T Consensus 79 ~-~~l~~~dv~iI~VPTPl~~~~~------pDls~v~~aa~sIa~~L~kG~LVIlEST~~PGT 134 (436)
T COG0677 79 P-EELKECDVFIICVPTPLKKYRE------PDLSYVESAARSIAPVLKKGDLVILESTTPPGT 134 (436)
T ss_pred h-hhcccCCEEEEEecCCcCCCCC------CChHHHHHHHHHHHHhcCCCCEEEEecCCCCCc
Confidence 5 4478999999998776544221 1223344444555555444444433 4566654
No 300
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0033 Score=56.92 Aligned_cols=115 Identities=20% Similarity=0.159 Sum_probs=64.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh----
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE---- 77 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~---- 77 (332)
++|.|+||+|.+|+.++..|+..|. ++.+.+++. +.++....++...... ..-+... ++ ..+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~l~~~~~~-~~~~~~D~~~~~~~~~~~~~ 70 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-------RLALADVNE--EGGEETLKLLREAGGD-GFYQRCDVRDYSQLTALAQA 70 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCc-eEEEEccCCCHHHHHHHHHH
Confidence 4799999999999999999998764 688998874 3333333333221100 0001110 11 111
Q ss_pred ---hcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022 78 ---ACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 78 ---al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+...|+||+.+|..... ..+. +..+..|.. ..+.+.+.+++.. . ..++++|.
T Consensus 71 i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-~~iv~vsS 136 (270)
T PRK05650 71 CEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-S-GRIVNIAS 136 (270)
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-C-CEEEEECC
Confidence 224689999999975321 1222 234556643 4445555555543 2 45666664
No 301
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.11 E-value=0.0034 Score=58.17 Aligned_cols=64 Identities=14% Similarity=0.155 Sum_probs=43.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC---C
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG---V 82 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~---a 82 (332)
|||+||| .|.+|+.++..|+..+. +|..+|+++ ++++ .+.+. ......+..+.+++ +
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~-------~v~v~dr~~--~~~~----~~~~~------g~~~~~s~~~~~~~~~~a 60 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGH-------EVVGYDVNQ--EAVD----VAGKL------GITARHSLEELVSKLEAP 60 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCC-------EEEEEECCH--HHHH----HHHHC------CCeecCCHHHHHHhCCCC
Confidence 4899999 79999999999988763 788999874 3322 12221 12233455565554 6
Q ss_pred cEEEEeC
Q 020022 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+||++.
T Consensus 61 dvVi~~v 67 (299)
T PRK12490 61 RTIWVMV 67 (299)
T ss_pred CEEEEEe
Confidence 8998873
No 302
>PRK09186 flagellin modification protein A; Provisional
Probab=97.11 E-value=0.0031 Score=56.39 Aligned_cols=163 Identities=17% Similarity=0.124 Sum_probs=81.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcC---C-ccceEeeCChhhh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP---L-LKGVVATTDAVEA 78 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~---~-~~~~~~~~~~~~a 78 (332)
+.++|.|+||+|.+|.+++..|+..|. ++++.++++ +.++....++... ... . ..++.-..+..++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~ 73 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-------IVIAADIDK--EALNELLESLGKEFKSKKLSLVELDITDQESLEEF 73 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEecCh--HHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHH
Confidence 356899999999999999999998763 688888764 3333233333211 000 0 0011111112222
Q ss_pred cC-------CCcEEEEeCCCCCC------CCCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022 79 CT-------GVNIAVMVGGFPRK------EGMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNA 138 (332)
Q Consensus 79 l~-------~aDiVi~~ag~~~~------~~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~ 138 (332)
++ ..|+||+.||.... .+.+.. ..+..|+ ...+.+.+.+.+.. ..++|++|.-.....
T Consensus 74 ~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~ 151 (256)
T PRK09186 74 LSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG--GGNLVNISSIYGVVA 151 (256)
T ss_pred HHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC--CceEEEEechhhhcc
Confidence 32 37999999875321 112222 2234444 45556666665543 246666653111100
Q ss_pred HHHHHhCCCCCCC--cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 139 LILKEFAPSIPAK--NITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 139 ~~~~~~~~~~~~~--~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.-...+ .+.+.. ..++.+......+.+.+++.+. +..++
T Consensus 152 ~~~~~~-~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~i~ 192 (256)
T PRK09186 152 PKFEIY-EGTSMTSPVEYAAIKAGIIHLTKYLAKYFK--DSNIR 192 (256)
T ss_pred ccchhc-cccccCCcchhHHHHHHHHHHHHHHHHHhC--cCCeE
Confidence 000000 111111 1355556555566666777653 34555
No 303
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=97.11 E-value=0.0026 Score=58.54 Aligned_cols=169 Identities=15% Similarity=0.113 Sum_probs=91.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC---ChhhhcC-
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT---DAVEACT- 80 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~---~~~~al~- 80 (332)
.++|.||||+|++|+|.+..|+..|. +++.+|.-.+ ..+... .-..+.. .....+.+.. .+.++|+
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy-------~v~~vDNl~n-~~~~sl-~r~~~l~-~~~~~v~f~~~Dl~D~~~L~k 71 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY-------GVVIVDNLNN-SYLESL-KRVRQLL-GEGKSVFFVEGDLNDAEALEK 71 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC-------cEEEEecccc-cchhHH-HHHHHhc-CCCCceEEEEeccCCHHHHHH
Confidence 46899999999999999999998874 7899996532 122111 0011111 1112332211 1223332
Q ss_pred -----CCcEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc---hHH-HHHHhCCCCC
Q 020022 81 -----GVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT---NAL-ILKEFAPSIP 149 (332)
Q Consensus 81 -----~aDiVi~~ag~~~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~---~~~-~~~~~~~~~~ 149 (332)
.-|-|+|.|+..... -+.+..+...|+--.-.+.+.++++..+ . ++..| .+.+ .+. -+.+..+-.-
T Consensus 72 vF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~-~-~V~ss-satvYG~p~~ip~te~~~t~~ 148 (343)
T KOG1371|consen 72 LFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVK-A-LVFSS-SATVYGLPTKVPITEEDPTDQ 148 (343)
T ss_pred HHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCc-e-EEEec-ceeeecCcceeeccCcCCCCC
Confidence 358899988754321 1344567788888888999999988743 2 33333 2211 000 0111111111
Q ss_pred CCcEEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe
Q 020022 150 AKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186 (332)
Q Consensus 150 ~~~i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G 186 (332)
+-..++-|..........+.+..+.....+|.+.+.|
T Consensus 149 p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~g 185 (343)
T KOG1371|consen 149 PTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIG 185 (343)
T ss_pred CCCcchhhhHHHHHHHHhhhccccceEEEEEeccccC
Confidence 2234566666555555555555555555555444444
No 304
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0029 Score=56.77 Aligned_cols=118 Identities=21% Similarity=0.260 Sum_probs=64.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-C---Chh---
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-T---DAV--- 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~---~~~--- 76 (332)
+.+++.|+||+|.+|++++..|+..|. ++.+.|+++. +.++....++.+... ....+... + +..
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-------~v~~~~r~~~-~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~ 77 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-------DVALFDLRTD-DGLAETAEHIEAAGR-RAIQIAADVTSKADLRAAV 77 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCcc-hHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHH
Confidence 456899999999999999999998774 7888888642 222322223332110 00001110 1 111
Q ss_pred ----hhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecC
Q 020022 77 ----EACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 77 ----~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tN 132 (332)
+.+..-|++|+.+|...... .+. ...+..|+... +.+.+.+.+.. ...++++|.
T Consensus 78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS 145 (254)
T PRK06114 78 ARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG--GGSIVNIAS 145 (254)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC--CcEEEEECc
Confidence 12334699999999753211 122 23455665544 44444444332 245666654
No 305
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.10 E-value=0.03 Score=49.76 Aligned_cols=156 Identities=17% Similarity=0.094 Sum_probs=76.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee----CChhh---
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT----TDAVE--- 77 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~----~~~~~--- 77 (332)
+++|.|+||+|++|+.++..|+..|. ++.+.+.+. ++.++....++.... ....-+... .+..+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~-------~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~ 72 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGW-------SVGINYARD-AAAAEETADAVRAAG-GRACVVAGDVANEADVIAMFD 72 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhcC-CcEEEEEeccCCHHHHHHHHH
Confidence 45899999999999999999998763 566654322 233333323332211 000011111 11111
Q ss_pred ----hcCCCcEEEEeCCCCCCC----CCCHH---HHHHhhHHHHH----HHHHHHHhhcC-CCeEEEEecCcccchHHHH
Q 020022 78 ----ACTGVNIAVMVGGFPRKE----GMERK---DVMSKNVSIYK----AQASALEQHAA-PNCKVLVVANPANTNALIL 141 (332)
Q Consensus 78 ----al~~aDiVi~~ag~~~~~----~~~r~---~~~~~n~~i~~----~i~~~i~~~~~-~~~~viv~tNP~~~~~~~~ 141 (332)
.+...|++|+.+|..... ..+.+ ..+..|..... .+.+.+....+ +...+|++|.....
T Consensus 73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~----- 147 (248)
T PRK06947 73 AVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR----- 147 (248)
T ss_pred HHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-----
Confidence 134689999999864221 12332 23455654433 33433332210 13456677653321
Q ss_pred HHhCCCCCCC-cEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 142 KEFAPSIPAK-NITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 142 ~~~~~~~~~~-~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+.. ..++.+..-...+-..+++.+. +.+++
T Consensus 148 ----~~~~~~~~~Y~~sK~~~~~~~~~la~~~~--~~~i~ 181 (248)
T PRK06947 148 ----LGSPNEYVDYAGSKGAVDTLTLGLAKELG--PHGVR 181 (248)
T ss_pred ----CCCCCCCcccHhhHHHHHHHHHHHHHHhh--hhCcE
Confidence 011111 1345555554556666666654 33454
No 306
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=97.10 E-value=0.0079 Score=56.45 Aligned_cols=117 Identities=18% Similarity=0.121 Sum_probs=68.1
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhh-hhhHHHHhhhhcC---Cc-cceEe-eCC------
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL-NGVKMELVDAAFP---LL-KGVVA-TTD------ 74 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l-~~~~~dl~~~~~~---~~-~~~~~-~~~------ 74 (332)
+|.|+||+|++|++++..|+..+.. .+|+++.++.+.+.. +.....+...... .. .++.. ..|
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-----~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-----AKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-----CEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 5899999999999999999986521 157777776421111 1111111111000 00 12221 111
Q ss_pred ------hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 75 ------AVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 75 ------~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
..+...++|+||++|+... ...+..++...|+.....+.+...+... . .++++|
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~-~~~~~~~~~~~nv~g~~~ll~~a~~~~~-~-~~v~iS 135 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVN-WVYPYSELRAANVLGTREVLRLAASGRA-K-PLHYVS 135 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEec-cCCcHHHHhhhhhHHHHHHHHHHhhCCC-c-eEEEEc
Confidence 2334578999999998653 2234556677899888888888877653 2 355555
No 307
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.10 E-value=0.0028 Score=58.31 Aligned_cols=77 Identities=23% Similarity=0.250 Sum_probs=53.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.+||+|+| +|.+|.+++..|+..|. . +|.++|++. +++++.+.++.+.. +. ..+....+..++++++|+
T Consensus 127 ~k~vlIlG-aGGaaraia~aL~~~G~-~-----~I~I~nR~~--~ka~~la~~l~~~~-~~-~~~~~~~~~~~~~~~aDi 195 (284)
T PRK12549 127 LERVVQLG-AGGAGAAVAHALLTLGV-E-----RLTIFDVDP--ARAAALADELNARF-PA-ARATAGSDLAAALAAADG 195 (284)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHcCC-C-----EEEEECCCH--HHHHHHHHHHHhhC-CC-eEEEeccchHhhhCCCCE
Confidence 36899999 69999999999998774 2 799999984 56666666654422 11 122222344567899999
Q ss_pred EEEe--CCCC
Q 020022 85 AVMV--GGFP 92 (332)
Q Consensus 85 Vi~~--ag~~ 92 (332)
||.+ +|..
T Consensus 196 VInaTp~Gm~ 205 (284)
T PRK12549 196 LVHATPTGMA 205 (284)
T ss_pred EEECCcCCCC
Confidence 9998 5654
No 308
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.09 E-value=0.0037 Score=57.11 Aligned_cols=157 Identities=15% Similarity=0.169 Sum_probs=80.7
Q ss_pred CCCCCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCc-hhhhhhhHHHHhhhhcCCccceEeeCC---
Q 020022 1 MAKEPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPA-AEALNGVKMELVDAAFPLLKGVVATTD--- 74 (332)
Q Consensus 1 m~~~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~-~~~l~~~~~dl~~~~~~~~~~~~~~~~--- 74 (332)
|.+..+.+.|+||+ +.+|.+++..|+..|. .+.+.|+++. .+.++....++... .....++.-...
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~-------~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~ 72 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGA-------ELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKS 72 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHH
Confidence 66667899999976 6899999999998774 6888888631 01111111111100 000000000000
Q ss_pred ----hhhhcCCCcEEEEeCCCCCC-----C--CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 75 ----AVEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 75 ----~~~al~~aDiVi~~ag~~~~-----~--~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
..+.+...|++|+.||+... + ..+.+ ..+..|+.. .+.+.+.+.+ .+.|+++|.-...
T Consensus 73 ~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~----~g~Iv~isS~~~~ 148 (274)
T PRK08415 73 LAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND----GASVLTLSYLGGV 148 (274)
T ss_pred HHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc----CCcEEEEecCCCc
Confidence 11223567999999997431 1 22333 345666544 4444444432 3456666532110
Q ss_pred hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
...|....++.++---..|-+.+|..+. +..|+
T Consensus 149 ---------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr 181 (274)
T PRK08415 149 ---------KYVPHYNVMGVAKAALESSVRYLAVDLG--KKGIR 181 (274)
T ss_pred ---------cCCCcchhhhhHHHHHHHHHHHHHHHhh--hcCeE
Confidence 0112112345555555666777777664 45565
No 309
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.015 Score=52.19 Aligned_cols=118 Identities=18% Similarity=0.172 Sum_probs=66.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCc--cceEee--CC---hh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLL--KGVVAT--TD---AV 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~--~~~~~~--~~---~~ 76 (332)
..+++.|+||+|.+|.+++..|+..|. +|.+.++++ +.++....++........ .....+ .+ ..
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 76 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-------HLHLVARDA--DALEALAADLRAAHGVDVAVHALDLSSPEAREQLA 76 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHH
Confidence 457999999999999999999998764 689999874 334333333322110000 000111 01 11
Q ss_pred hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022 77 EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 77 ~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
+.+...|++|+.+|..... ..+. ...+..|+. ..+.+.+.+.+.. .+.++++|.
T Consensus 77 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~iss 140 (259)
T PRK06125 77 AEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG--SGVIVNVIG 140 (259)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CcEEEEecC
Confidence 2345789999999875321 1222 233455654 4445555555442 245666654
No 310
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.09 E-value=0.0059 Score=63.02 Aligned_cols=150 Identities=15% Similarity=0.131 Sum_probs=79.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-C----CccceEeeCChhhhc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-P----LLKGVVATTDAVEAC 79 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~----~~~~~~~~~~~~~al 79 (332)
.++|.|+||+|++|.+++..|++.|. +|++.|++. +.++....++..... . ...+++-..+..+++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga-------~Vvi~~r~~--~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~ 484 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGA-------HVVLADLNL--EAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAF 484 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHH
Confidence 36899999999999999999998764 799999874 333332233321100 0 001111111122222
Q ss_pred -------CCCcEEEEeCCCCCCC---CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022 80 -------TGVNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 80 -------~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~ 142 (332)
.+.|+||+.||..... ..+.. ..+..|+. ..+...+.+.+... .+.++++|.-...
T Consensus 485 ~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~-~g~IV~iSS~~a~------ 557 (676)
T TIGR02632 485 ADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGL-GGNIVFIASKNAV------ 557 (676)
T ss_pred HHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEeChhhc------
Confidence 3689999999975321 12222 22333433 34455566655432 3456665532211
Q ss_pred HhCCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
+ +.+....++.++.....+.+.++..++
T Consensus 558 -~--~~~~~~aY~aSKaA~~~l~r~lA~el~ 585 (676)
T TIGR02632 558 -Y--AGKNASAYSAAKAAEAHLARCLAAEGG 585 (676)
T ss_pred -C--CCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 112112355566666677777777665
No 311
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0031 Score=56.61 Aligned_cols=36 Identities=25% Similarity=0.279 Sum_probs=31.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
+.++|.|+||+|++|.+++..|+..|. ++.++|++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-------~v~~~~r~~ 41 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-------TVVVGDIDP 41 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-------EEEEEeCCH
Confidence 346899999999999999999998763 789999874
No 312
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=97.08 E-value=0.0017 Score=53.51 Aligned_cols=116 Identities=16% Similarity=0.291 Sum_probs=67.8
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc----CC-ccce---EeeCChhhhc
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF----PL-LKGV---VATTDAVEAC 79 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~----~~-~~~~---~~~~~~~~al 79 (332)
|+|+| +|.+|..++..|.+.+. ++.|+++.+ .++. +..... .. ...+ .......+..
T Consensus 1 I~I~G-~GaiG~~~a~~L~~~g~-------~V~l~~r~~---~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQAGH-------DVTLVSRSP---RLEA----IKEQGLTITGPDGDETVQPPIVISAPSADA 65 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHHTTC-------EEEEEESHH---HHHH----HHHHCEEEEETTEEEEEEEEEEESSHGHHH
T ss_pred CEEEC-cCHHHHHHHHHHHHCCC-------ceEEEEccc---cHHh----hhheeEEEEecccceecccccccCcchhcc
Confidence 78999 69999999999988653 799999862 2221 111110 11 0111 1122222457
Q ss_pred CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCCCcE-EEech
Q 020022 80 TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI-TCLTR 158 (332)
Q Consensus 80 ~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~~~i-~~~t~ 158 (332)
...|+||++.-.. -..+..+.++.+..|+..|+.+-|=++..-.+ .++ +|+.++ .+.+.
T Consensus 66 ~~~D~viv~vKa~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~~l-~~~---~~~~~v~~g~~~ 125 (151)
T PF02558_consen 66 GPYDLVIVAVKAY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGNEEVL-AEY---FPRPRVLGGVTT 125 (151)
T ss_dssp STESEEEE-SSGG----------------GHHHHHHHHCTGEETTEEEEEESSSSSHHHHH-HCH---STGSGEEEEEEE
T ss_pred CCCcEEEEEeccc----------------chHHHHHHHhhccCCCcEEEEEeCCCCcHHHH-HHH---cCCCcEEEEEEe
Confidence 8999999995221 12356666778877777788888866644333 333 344564 44443
No 313
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0021 Score=57.71 Aligned_cols=151 Identities=18% Similarity=0.173 Sum_probs=80.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhh----hHHHHhhhhcCCccceEeeCChhhhcC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNG----VKMELVDAAFPLLKGVVATTDAVEACT 80 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~----~~~dl~~~~~~~~~~~~~~~~~~~al~ 80 (332)
.++|.|+||+|.+|+.++..|+..|. ++.++++++.+ ...+ ...|+.+.... .. ......+.+.
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~r~~~~-~~~~~~~~~~~D~~~~~~~--~~--~~~~~~~~~~ 76 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAGA-------RVVTTARSRPD-DLPEGVEFVAADLTTAEGC--AA--VARAVLERLG 76 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCCC-------EEEEEeCChhh-hcCCceeEEecCCCCHHHH--HH--HHHHHHHHcC
Confidence 37899999999999999999998764 78889886421 1110 11122111100 00 0001223345
Q ss_pred CCcEEEEeCCCCCCC-----CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCC
Q 020022 81 GVNIAVMVGGFPRKE-----GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSI 148 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~-----~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~ 148 (332)
..|+||+.||..... ..+ ....+..|+. +.+.+.+.+.+.. . ..+|++|..... .+.
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-g~ii~isS~~~~---------~~~ 145 (260)
T PRK06523 77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-S-GVIIHVTSIQRR---------LPL 145 (260)
T ss_pred CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-C-cEEEEEeccccc---------CCC
Confidence 789999999864211 112 2234455654 3455556665543 2 456677654321 111
Q ss_pred C-CCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 149 P-AKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 149 ~-~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
+ ....++.++.-...+-+.+++.++ +..|+
T Consensus 146 ~~~~~~Y~~sK~a~~~l~~~~a~~~~--~~gi~ 176 (260)
T PRK06523 146 PESTTAYAAAKAALSTYSKSLSKEVA--PKGVR 176 (260)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHh--hcCcE
Confidence 2 112345455544556666666553 34555
No 314
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.08 E-value=0.017 Score=51.58 Aligned_cols=116 Identities=21% Similarity=0.237 Sum_probs=63.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhhh---
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVEA--- 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~a--- 78 (332)
+++.|+||+|.+|.+++..|++.|. ++.+++.++ +.++....++..... ...-+... ++ ..++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~i~~~~~~ 70 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-------AVAVADLNE--ETAKETAKEINQAGG-KAVAYKLDVSDKDQVFSAIDQ 70 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHH
Confidence 3689999999999999999998764 688898763 333322222322110 00001110 11 1111
Q ss_pred ----cCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022 79 ----CTGVNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 79 ----l~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
+...|+||+++|..... +.+.. ..+..|+. +++.+.+.+++... ...++++|.
T Consensus 71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~~iv~~sS 137 (254)
T TIGR02415 71 AAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH-GGKIINAAS 137 (254)
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-CeEEEEecc
Confidence 23579999999874321 22333 33455654 33455555555442 356666653
No 315
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0051 Score=54.73 Aligned_cols=156 Identities=13% Similarity=0.106 Sum_probs=78.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhhhc---
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEAC--- 79 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~al--- 79 (332)
+.+.|+||+|++|++++..|+..|. .+++.+.+. ++.+.....++...... ...++.......+++
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~-------~vv~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGY-------AVCLNYLRN-RDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAV 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-------eEEEecCCC-HHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHH
Confidence 4699999999999999999998763 567776442 23333222222211100 000111111122222
Q ss_pred ----CCCcEEEEeCCCCCCC----CCCHH---HHHHhhHHHHHHHHHHHHhhc-----CCCeEEEEecCcccchHHHHHH
Q 020022 80 ----TGVNIAVMVGGFPRKE----GMERK---DVMSKNVSIYKAQASALEQHA-----APNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 80 ----~~aDiVi~~ag~~~~~----~~~r~---~~~~~n~~i~~~i~~~i~~~~-----~~~~~viv~tNP~~~~~~~~~~ 143 (332)
...|+||+++|..... ..+.+ ..+..|+.....+.+.+.+.. .+.+.++++|.....
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~------- 147 (248)
T PRK06123 75 DRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR------- 147 (248)
T ss_pred HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc-------
Confidence 3679999999875321 12222 345667665444443333221 112457777754321
Q ss_pred hCCCCCCCc-EEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 144 FAPSIPAKN-ITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 144 ~~~~~~~~~-i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+... -++.++.....+-..+++.+. +.+++
T Consensus 148 --~~~~~~~~~Y~~sKaa~~~~~~~la~~~~--~~~i~ 181 (248)
T PRK06123 148 --LGSPGEYIDYAASKGAIDTMTIGLAKEVA--AEGIR 181 (248)
T ss_pred --CCCCCCccchHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence 1112111 245555555566666777763 33454
No 316
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0039 Score=54.86 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=30.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
++|.|+||+|.+|++++..|+..|. +|.++|+++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-------~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-------QVTATVRGP 35 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-------EEEEEeCCC
Confidence 5799999999999999999998763 789999875
No 317
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.05 E-value=0.028 Score=50.58 Aligned_cols=156 Identities=12% Similarity=0.115 Sum_probs=81.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC----CccceEeeCC-----
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP----LLKGVVATTD----- 74 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~----~~~~~~~~~~----- 74 (332)
+.++|.|+||++.+|.+++..|+..|. .|.+.+... ++.++....++...... ...+++...+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 78 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-------NIAFTYNSN-VEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELF 78 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEcCCC-HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 347899999999999999999998764 577765432 23443333333321000 0001110001
Q ss_pred --hhhhcCCCcEEEEeCCCCCC-------C--CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 75 --AVEACTGVNIAVMVGGFPRK-------E--GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 75 --~~~al~~aDiVi~~ag~~~~-------~--~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
..+.+...|++|+.||.... + ..+.+ ..+..|+ ...+.+.+.+++.. .+.||++|.....
T Consensus 79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~ 156 (260)
T PRK08416 79 KKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG--GGSIISLSSTGNL 156 (260)
T ss_pred HHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC--CEEEEEEeccccc
Confidence 11223468999999985321 1 11111 2233343 33455555555432 3567777643221
Q ss_pred hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
...|..-.++.++.....+-+.+++.+. +..|+
T Consensus 157 ---------~~~~~~~~Y~asK~a~~~~~~~la~el~--~~gi~ 189 (260)
T PRK08416 157 ---------VYIENYAGHGTSKAAVETMVKYAATELG--EKNIR 189 (260)
T ss_pred ---------cCCCCcccchhhHHHHHHHHHHHHHHhh--hhCeE
Confidence 0112112356667666777777887765 34554
No 318
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.021 Score=51.74 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=29.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
+++.|+||+|++|..++..|+..|. +|.+.++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-------~V~~~~r~~ 35 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-------EVWATARKA 35 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 4799999999999999999988763 788898874
No 319
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0029 Score=55.77 Aligned_cols=36 Identities=31% Similarity=0.212 Sum_probs=30.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
..++|.|+||+|.+|+.++..|+..|. +++++++++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-------~v~~~~r~~ 37 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-------QVIGIARSA 37 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-------EEEEEeCCc
Confidence 346899999999999999999998763 788888864
No 320
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0048 Score=55.43 Aligned_cols=99 Identities=11% Similarity=0.043 Sum_probs=57.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee--CChhhhcCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT--TDAVEACTGV 82 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~--~~~~~al~~a 82 (332)
.+++.|+||+|.+|.+++..|+..|. ++.+.++++. +.++ .. . +.. ........+ .+..+.+...
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-------~Vi~~~r~~~-~~~~-~~--~-~~~-~~~~~~D~~~~~~~~~~~~~i 80 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-------KVIGLTHSKI-NNSE-SN--D-ESP-NEWIKWECGKEESLDKQLASL 80 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-------EEEEEECCch-hhhh-hh--c-cCC-CeEEEeeCCCHHHHHHhcCCC
Confidence 36899999999999999999998764 6888887641 1111 00 0 100 000011111 1223456789
Q ss_pred cEEEEeCCCCCCCCCCH---HHHHHhhHHHHHHHHHH
Q 020022 83 NIAVMVGGFPRKEGMER---KDVMSKNVSIYKAQASA 116 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r---~~~~~~n~~i~~~i~~~ 116 (332)
|++|+.||.......+. .+.+..|+...-.+++.
T Consensus 81 DilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 117 (245)
T PRK12367 81 DVLILNHGINPGGRQDPENINKALEINALSSWRLLEL 117 (245)
T ss_pred CEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999753322332 34556676544444433
No 321
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.02 E-value=0.0029 Score=51.50 Aligned_cols=76 Identities=21% Similarity=0.190 Sum_probs=51.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
...||.|+| +|.+|..++..|...|. . +|.+++++. ++++..+..+... ...+....+..+.+.++|
T Consensus 11 ~~~~vlviG-aGg~ar~v~~~L~~~g~-~-----~i~i~nRt~--~ra~~l~~~~~~~----~~~~~~~~~~~~~~~~~D 77 (135)
T PF01488_consen 11 KGKRVLVIG-AGGAARAVAAALAALGA-K-----EITIVNRTP--ERAEALAEEFGGV----NIEAIPLEDLEEALQEAD 77 (135)
T ss_dssp TTSEEEEES-SSHHHHHHHHHHHHTTS-S-----EEEEEESSH--HHHHHHHHHHTGC----SEEEEEGGGHCHHHHTES
T ss_pred CCCEEEEEC-CHHHHHHHHHHHHHcCC-C-----EEEEEECCH--HHHHHHHHHcCcc----ccceeeHHHHHHHHhhCC
Confidence 357999999 69999999999998875 2 699999873 5554443333110 112223345667889999
Q ss_pred EEEEeCCCC
Q 020022 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.+-+.+
T Consensus 78 ivI~aT~~~ 86 (135)
T PF01488_consen 78 IVINATPSG 86 (135)
T ss_dssp EEEE-SSTT
T ss_pred eEEEecCCC
Confidence 999986655
No 322
>PRK05855 short chain dehydrogenase; Validated
Probab=97.02 E-value=0.0067 Score=60.89 Aligned_cols=156 Identities=15% Similarity=0.052 Sum_probs=81.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChh----
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAV---- 76 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~---- 76 (332)
..+++.|+||+|++|.+++..|+..|. +|.+.+++. +.++....++...... ....++-.....
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~ 384 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-------EVVASDIDE--AAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAE 384 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 346899999999999999999998764 789999874 3343333333221100 000110000111
Q ss_pred ---hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH
Q 020022 77 ---EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILKE 143 (332)
Q Consensus 77 ---~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~ 143 (332)
+.+...|++|+.||..... ..+. ...+..|+. ..+.+.+.+.+.. +.+.||++|.-...
T Consensus 385 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~------- 456 (582)
T PRK05855 385 WVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG-TGGHIVNVASAAAY------- 456 (582)
T ss_pred HHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEECChhhc-------
Confidence 1123579999999985421 1222 233456654 3444555555544 23567777643221
Q ss_pred hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 144 FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 144 ~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.+..-.++.++.....+...++..+. +.+|+
T Consensus 457 --~~~~~~~~Y~~sKaa~~~~~~~l~~e~~--~~gi~ 489 (582)
T PRK05855 457 --APSRSLPAYATSKAAVLMLSECLRAELA--AAGIG 489 (582)
T ss_pred --cCCCCCcHHHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence 1112122344455444455556666543 33454
No 323
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.02 E-value=0.0052 Score=57.50 Aligned_cols=156 Identities=17% Similarity=0.166 Sum_probs=84.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-cc--ceEeeCC-------
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LK--GVVATTD------- 74 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~--~~~~~~~------- 74 (332)
.+.+.|+||+|.+|.+++..|+..|. +|.++++++ ++++....++....... .. ....+.+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~ 123 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGL-------NLVLVARNP--DKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKR 123 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-------CEEEEECCH--HHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHH
Confidence 35799999999999999999998774 689999984 55555445554311000 00 0111111
Q ss_pred hhhhcC--CCcEEEEeCCCCCC---C--CCCHH---HHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022 75 AVEACT--GVNIAVMVGGFPRK---E--GMERK---DVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALI 140 (332)
Q Consensus 75 ~~~al~--~aDiVi~~ag~~~~---~--~~~r~---~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~ 140 (332)
..+.+. +.|++|+.||.... + +.+.+ ..+..|+... +.+.+.+.+.. .+.+|++|.-...
T Consensus 124 l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~g~IV~iSS~a~~---- 197 (320)
T PLN02780 124 IKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIINIGSGAAI---- 197 (320)
T ss_pred HHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC--CcEEEEEechhhc----
Confidence 122333 35599999997531 1 22322 3455666544 44444454433 3456677643221
Q ss_pred HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
..++.|....++.+..-...+-..++..+. +..|+
T Consensus 198 ---~~~~~p~~~~Y~aSKaal~~~~~~L~~El~--~~gI~ 232 (320)
T PLN02780 198 ---VIPSDPLYAVYAATKAYIDQFSRCLYVEYK--KSGID 232 (320)
T ss_pred ---cCCCCccchHHHHHHHHHHHHHHHHHHHHh--ccCeE
Confidence 001112222455555555566666776664 34454
No 324
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.02 E-value=0.0032 Score=56.45 Aligned_cols=156 Identities=13% Similarity=0.121 Sum_probs=80.9
Q ss_pred CCC--CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCCh--
Q 020022 1 MAK--EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDA-- 75 (332)
Q Consensus 1 m~~--~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~-- 75 (332)
|++ ..+++.|+||+|.+|.+++..|+..|. ++.+.+.+. ++.++ ++.+... ....++.-..+.
T Consensus 1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~----~l~~~~~~~~~~Dl~~~~~~~~ 68 (255)
T PRK06463 1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGA-------KVAVLYNSA-ENEAK----ELREKGVFTIKCDVGNRDQVKK 68 (255)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCc-HHHHH----HHHhCCCeEEEecCCCHHHHHH
Confidence 554 347899999999999999999998763 577766542 12111 1211100 000000000011
Q ss_pred -----hhhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchHHH
Q 020022 76 -----VEACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNALI 140 (332)
Q Consensus 76 -----~~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~ 140 (332)
.+.+...|+||+.+|..... ..+.+ ..+..|+.- .+.+.+.+++.. .+.||++|.....
T Consensus 69 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS~~~~---- 142 (255)
T PRK06463 69 SKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK--NGAIVNIASNAGI---- 142 (255)
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CcEEEEEcCHHhC----
Confidence 12234679999999875321 12222 334556554 566667666543 3566676642211
Q ss_pred HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+..+..-.++.++.-...+-+.++..+. +.+|+
T Consensus 143 ----~~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~~i~ 176 (255)
T PRK06463 143 ----GTAAEGTTFYAITKAGIIILTRRLAFELG--KYGIR 176 (255)
T ss_pred ----CCCCCCccHhHHHHHHHHHHHHHHHHHhh--hcCeE
Confidence 00011112345555555566666666654 34565
No 325
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.014 Score=51.85 Aligned_cols=117 Identities=16% Similarity=0.195 Sum_probs=63.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEee-CC--------
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVAT-TD-------- 74 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~-~~-------- 74 (332)
.+++.|+||+|.+|.+++..|+..|. .+.+.++++ +.++....++...... ...-+... ++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 72 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-------DLALCARRT--DRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVF 72 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHH
Confidence 35799999999999999999998763 688998874 3333333333221100 00000110 11
Q ss_pred --hhhhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHH----HHhhcCCCeEEEEecC
Q 020022 75 --AVEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNVSIYKAQASA----LEQHAAPNCKVLVVAN 132 (332)
Q Consensus 75 --~~~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~~i~~~i~~~----i~~~~~~~~~viv~tN 132 (332)
..+.+...|+||+.+|+..... .+. ...+..|+.....+.+. +.+.. . ..++++|.
T Consensus 73 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~-~~iv~~sS 140 (248)
T PRK08251 73 AEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-S-GHLVLISS 140 (248)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C-CeEEEEec
Confidence 1223457899999999754321 111 23345666544444443 34433 2 35666653
No 326
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.01 E-value=0.0098 Score=52.94 Aligned_cols=27 Identities=30% Similarity=0.283 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhccc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVM 30 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~ 30 (332)
..+++.|+||+|.+|.+++..|+..|.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~ 29 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY 29 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC
Confidence 346899999999999999999998763
No 327
>PRK06484 short chain dehydrogenase; Validated
Probab=97.01 E-value=0.0067 Score=60.44 Aligned_cols=156 Identities=17% Similarity=0.166 Sum_probs=84.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh-------h
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV-------E 77 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~-------~ 77 (332)
.+++.|+||+|.+|.+++..|+..|. .|.+.++++ +.++.....+.........++.-..+.. +
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 339 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD-------RLLIIDRDA--EGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQA 339 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHH
Confidence 36899999999999999999998773 789999874 3333222212100000000110001111 1
Q ss_pred hcCCCcEEEEeCCCCCC--C--CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCCCCCC
Q 020022 78 ACTGVNIAVMVGGFPRK--E--GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPA 150 (332)
Q Consensus 78 al~~aDiVi~~ag~~~~--~--~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~ 150 (332)
.+...|++|+.||.... + ..+ .+..+..|+.....+.+.+..+-.+.+.||++|..... .+.|.
T Consensus 340 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~---------~~~~~ 410 (520)
T PRK06484 340 RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL---------LALPP 410 (520)
T ss_pred HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc---------CCCCC
Confidence 22457999999997521 1 122 23446667765555555544432234567777754331 11222
Q ss_pred CcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 151 KNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 151 ~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.-.++.++.--..+-+.+++.+. +..|+
T Consensus 411 ~~~Y~asKaal~~l~~~la~e~~--~~gI~ 438 (520)
T PRK06484 411 RNAYCASKAAVTMLSRSLACEWA--PAGIR 438 (520)
T ss_pred CchhHHHHHHHHHHHHHHHHHhh--hhCeE
Confidence 22345555555566677777664 34555
No 328
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.00 E-value=0.005 Score=57.10 Aligned_cols=64 Identities=19% Similarity=0.290 Sum_probs=42.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC---CC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT---GV 82 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~---~a 82 (332)
|||+||| .|.+|+.++..|+..+. ++.++|+++ ++.+ .+.+. ......+..+.++ ++
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~-------~v~v~dr~~--~~~~----~~~~~------g~~~~~~~~e~~~~~~~~ 60 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGH-------EVVGYDRNP--EAVE----ALAEE------GATGADSLEELVAKLPAP 60 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCC-------eEEEEECCH--HHHH----HHHHC------CCeecCCHHHHHhhcCCC
Confidence 4899999 79999999999998763 799999874 3332 12221 1123334445444 46
Q ss_pred cEEEEeC
Q 020022 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+||++.
T Consensus 61 dvvi~~v 67 (301)
T PRK09599 61 RVVWLMV 67 (301)
T ss_pred CEEEEEe
Confidence 8988873
No 329
>PRK06484 short chain dehydrogenase; Validated
Probab=96.99 E-value=0.0047 Score=61.56 Aligned_cols=122 Identities=19% Similarity=0.160 Sum_probs=66.9
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCC------
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD------ 74 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~------ 74 (332)
|+.+.+.+.|+||++.+|..++..|+..|. .|.+++++. +.++....++.........++....+
T Consensus 1 ~~~~~k~~lITGas~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 71 (520)
T PRK06484 1 SKAQSRVVLVTGAAGGIGRAACQRFARAGD-------QVVVADRNV--ERARERADSLGPDHHALAMDVSDEAQIREGFE 71 (520)
T ss_pred CCCCCeEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhCCceeEEEeccCCHHHHHHHHH
Confidence 455567899999999999999999998763 689998874 33332222221100000001100001
Q ss_pred -hhhhcCCCcEEEEeCCCCC---CC--CCC---HHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022 75 -AVEACTGVNIAVMVGGFPR---KE--GME---RKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 75 -~~~al~~aDiVi~~ag~~~---~~--~~~---r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
..+.+...|++|+.||... .+ ..+ ....+..|+. .++.+.+.+.+.. ..+.+++++.
T Consensus 72 ~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~~iv~isS 141 (520)
T PRK06484 72 QLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG-HGAAIVNVAS 141 (520)
T ss_pred HHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCCeEEEECC
Confidence 1122346899999998731 11 122 2334556654 4455555554433 2336777764
No 330
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0026 Score=56.58 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=29.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
|+|.|+||+|++|.+++..|+..|. ++.+++++.
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~-------~v~~~~r~~ 35 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGI-------AVLGVARSR 35 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCC-------EEEEEecCc
Confidence 5899999999999999999998763 688888764
No 331
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0081 Score=54.63 Aligned_cols=35 Identities=23% Similarity=0.132 Sum_probs=29.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
.+.+.|+||+|++|.+++..|+..|. +|.+.+++.
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-------~V~~~~r~~ 44 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-------PVALGARRV 44 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 35799999999999999999998764 688888763
No 332
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=96.95 E-value=0.0051 Score=60.78 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=46.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcCCccceEeeCChhhhcC--
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFPLLKGVVATTDAVEACT-- 80 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~~~~~~~~~~~~~~al~-- 80 (332)
+.++|++|| .|.||+.++..|+..|. +|+.||++. ++.+ ++.+. .......+....+..++++
T Consensus 5 ~~~~IG~IG-LG~MG~~mA~nL~~~G~-------~V~V~NRt~--~k~~----~l~~~~~~~Ga~~~~~a~s~~e~v~~l 70 (493)
T PLN02350 5 ALSRIGLAG-LAVMGQNLALNIAEKGF-------PISVYNRTT--SKVD----ETVERAKKEGNLPLYGFKDPEDFVLSI 70 (493)
T ss_pred CCCCEEEEe-eHHHHHHHHHHHHhCCC-------eEEEECCCH--HHHH----HHHHhhhhcCCcccccCCCHHHHHhcC
Confidence 457999999 89999999999998774 799999974 3333 22221 0000011223344555555
Q ss_pred -CCcEEEEeC
Q 020022 81 -GVNIAVMVG 89 (332)
Q Consensus 81 -~aDiVi~~a 89 (332)
.+|+||+..
T Consensus 71 ~~~dvIi~~v 80 (493)
T PLN02350 71 QKPRSVIILV 80 (493)
T ss_pred CCCCEEEEEC
Confidence 499999983
No 333
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.013 Score=52.70 Aligned_cols=120 Identities=12% Similarity=0.185 Sum_probs=66.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCcc--ceEee--CC----h
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLK--GVVAT--TD----A 75 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~--~~~~~--~~----~ 75 (332)
..++|.|+||+|.+|.+++..|+..+-. .+.+++++++ ..++....++......... ....+ .+ .
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~------~V~~~~r~~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~ 79 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPA------RVVLAALPDD-PRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVI 79 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCC------eEEEEeCCcc-hhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHH
Confidence 4578999999999999999999876411 6889988752 1133333334321100000 00111 11 1
Q ss_pred hhhc--CCCcEEEEeCCCCCCCCC---CH---HHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecC
Q 020022 76 VEAC--TGVNIAVMVGGFPRKEGM---ER---KDVMSKNVS----IYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 76 ~~al--~~aDiVi~~ag~~~~~~~---~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+.. .+.|++|+.+|....... +. .+.+..|.. ..+.+.+.+.+.. . ..++++|.
T Consensus 80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~-~~iv~isS 146 (253)
T PRK07904 80 DAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-F-GQIIAMSS 146 (253)
T ss_pred HHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-C-ceEEEEec
Confidence 1111 369999998887532211 11 124566653 3355677776654 2 45666664
No 334
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.93 E-value=0.0064 Score=57.90 Aligned_cols=68 Identities=24% Similarity=0.323 Sum_probs=44.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
+||+||| .|.||.+++..|...|. ++.++|.+++...+ .... ...... ...++..+++++||+|
T Consensus 1 ~~I~iIG-~GliG~siA~~L~~~G~-------~v~i~~~~~~~~~~---~~a~---~~~~~~--~~~~~~~~~~~~aDlV 64 (359)
T PRK06545 1 RTVLIVG-LGLIGGSLALAIKAAGP-------DVFIIGYDPSAAQL---ARAL---GFGVID--ELAADLQRAAAEADLI 64 (359)
T ss_pred CeEEEEE-eCHHHHHHHHHHHhcCC-------CeEEEEeCCCHHHH---HHHh---cCCCCc--ccccCHHHHhcCCCEE
Confidence 4799999 79999999999998763 57788877532111 1101 111111 1234567788999999
Q ss_pred EEeC
Q 020022 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 65 ilav 68 (359)
T PRK06545 65 VLAV 68 (359)
T ss_pred EEeC
Confidence 9984
No 335
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.018 Score=51.40 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=30.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
.++|.|+||+|++|++++..|+..|. ++.+.++++
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G~-------~Vi~~~r~~ 43 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAGA-------KVVLASRRV 43 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 47999999999999999999998763 688888874
No 336
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.92 E-value=0.014 Score=51.91 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhccc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVM 30 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~ 30 (332)
.+.+.|+||+|++|.+++..|+..|.
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~ 28 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF 28 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC
Confidence 35789999999999999999998763
No 337
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.91 E-value=0.057 Score=48.46 Aligned_cols=156 Identities=13% Similarity=0.107 Sum_probs=78.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CCh-------
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TDA------- 75 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~~------- 75 (332)
+.+++.|+||+|.+|.+++..|+..|. .+++..++. .+.++....++...... ...+... ++.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-------~vvi~~~~~-~~~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~i~~~~ 76 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-------KVVINYRSD-EEEANDVAEEIKKAGGE-AIAVKGDVTVESDVVNLI 76 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHHcCCe-EEEEEecCCCHHHHHHHH
Confidence 347999999999999999999998763 566766542 22222222233221100 0001110 111
Q ss_pred ---hhhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022 76 ---VEACTGVNIAVMVGGFPRKE---GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 76 ---~~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~ 142 (332)
.+.+...|++|+.+|..... ..+.+ ..+..|+. ..+.+.+.+.+.. ..+.++++|.-..
T Consensus 77 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~~sS~~~------- 148 (261)
T PRK08936 77 QTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIINMSSVHE------- 148 (261)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEccccc-------
Confidence 11123579999999975321 12222 33556643 3345555555543 2356666664111
Q ss_pred HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
. ...|..-.++.++.-...+-..+++.+. +..|+
T Consensus 149 -~-~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~ 182 (261)
T PRK08936 149 -Q-IPWPLFVHYAASKGGVKLMTETLAMEYA--PKGIR 182 (261)
T ss_pred -c-CCCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeE
Confidence 0 1122222345555444455555665553 34565
No 338
>PLN00016 RNA-binding protein; Provisional
Probab=96.91 E-value=0.0045 Score=59.25 Aligned_cols=36 Identities=19% Similarity=0.318 Sum_probs=31.1
Q ss_pred CCcEEEEE----cCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 4 EPVRVLVT----GAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 4 ~~~kI~Ii----Ga~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
+++||.|+ ||+|++|++++..|+..|. +|++++++.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-------~V~~l~R~~ 90 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-------EVTLFTRGK 90 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCC-------EEEEEecCC
Confidence 45799999 9999999999999998763 788898874
No 339
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.91 E-value=0.048 Score=49.22 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=26.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI 44 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~ 44 (332)
..+.|+||+|.+|.+++..|+..|. ++.+.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~-------~V~~~~~ 33 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGY-------RVVLHYH 33 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCC-------eEEEEcC
Confidence 3688999999999999999998774 5777654
No 340
>PRK08324 short chain dehydrogenase; Validated
Probab=96.90 E-value=0.0083 Score=62.04 Aligned_cols=117 Identities=21% Similarity=0.198 Sum_probs=63.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc--CCccceEeeCChhhh-----
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF--PLLKGVVATTDAVEA----- 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~--~~~~~~~~~~~~~~a----- 78 (332)
++|.|+||+|++|+.++..|+..|. +|+++|+++ +.++.....+..... ....++.......++
T Consensus 423 k~vLVTGasggIG~~la~~L~~~Ga-------~Vvl~~r~~--~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~ 493 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEGA-------CVVLADLDE--EAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAA 493 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcC-------EEEEEeCCH--HHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHH
Confidence 6899999999999999999998763 799999874 333322222221100 000000000111122
Q ss_pred --cCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHH----HHHHHhhcCCCeEEEEecC
Q 020022 79 --CTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQ----ASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 79 --l~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i----~~~i~~~~~~~~~viv~tN 132 (332)
+.+.|+||+++|..... ..+. ...+..|......+ .+.+++.. ..+.++++|.
T Consensus 494 ~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~vsS 558 (681)
T PRK08324 494 LAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVFIAS 558 (681)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEEECC
Confidence 23689999999975322 1222 22344555444444 44444433 2245666664
No 341
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.055 Score=48.67 Aligned_cols=117 Identities=19% Similarity=0.182 Sum_probs=65.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEee-CCh-------
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVAT-TDA------- 75 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~-~~~------- 75 (332)
.+.+.|+||+|.+|.+++..|+..|. +|.+.++++ +.++....++...... ....+... ++.
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 78 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAGA-------SVAICGRDE--ERLASAEARLREKFPGARLLAARCDVLDEADVAAFA 78 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------eEEEEeCCH--HHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHH
Confidence 36899999999999999999998764 688999874 3444333333221100 00001110 111
Q ss_pred ---hhhcCCCcEEEEeCCCCCCC---CCCHH---HHHHhh----HHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 76 ---VEACTGVNIAVMVGGFPRKE---GMERK---DVMSKN----VSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 76 ---~~al~~aDiVi~~ag~~~~~---~~~r~---~~~~~n----~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+.+...|++|+.||..... ..+.+ ..+..| ....+.+.+.+++.. .+.|+++|.
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~isS 146 (265)
T PRK07062 79 AAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA--AASIVCVNS 146 (265)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC--CcEEEEecc
Confidence 11234679999999975321 11222 223333 344566666666543 246666664
No 342
>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=96.89 E-value=0.0035 Score=54.78 Aligned_cols=109 Identities=18% Similarity=0.285 Sum_probs=71.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhh----hhhHHHH---hhhh-cC--C-----ccce
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEAL----NGVKMEL---VDAA-FP--L-----LKGV 69 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l----~~~~~dl---~~~~-~~--~-----~~~~ 69 (332)
.-||+|+| +|-+|+.+|..++..|. ++.|||+.+ +.+ +....|| ++.. .. + ...+
T Consensus 3 ~~ki~ivg-Sgl~g~~WAmlFAs~Gy-------qVqlYDI~e--~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~i 72 (313)
T KOG2305|consen 3 FGKIAIVG-SGLVGSSWAMLFASSGY-------QVQLYDILE--KQLQTALENVEKELRKLEEHGLLRGNLSADEQLALI 72 (313)
T ss_pred ccceeEee-cccccchHHHHHhccCc-------eEEEeeccH--HHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHH
Confidence 45999999 89999999999999875 899999975 222 1122222 2211 11 0 1345
Q ss_pred EeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022 70 VATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNAL 139 (332)
Q Consensus 70 ~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~ 139 (332)
..++++.|..++|=.| .+...+.+...+.+.+++.+...|. .|+.|....+|..
T Consensus 73 s~t~~l~E~vk~Ai~i--------------QEcvpE~L~lkk~ly~qlD~i~d~~--tIlaSSTSt~mpS 126 (313)
T KOG2305|consen 73 SGTTSLNELVKGAIHI--------------QECVPEDLNLKKQLYKQLDEIADPT--TILASSTSTFMPS 126 (313)
T ss_pred hCCccHHHHHhhhhhH--------------HhhchHhhHHHHHHHHHHHHhcCCc--eEEeccccccChH
Confidence 6677888888887433 1223445677788999999988554 5667665555443
No 343
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.87 E-value=0.0086 Score=55.53 Aligned_cols=36 Identities=28% Similarity=0.214 Sum_probs=30.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
+.+++.|+||+|.+|.+++..|+..|. ++++.|...
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-------~Vv~~~~~~ 46 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-------TVVVNDVAS 46 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-------EEEEecCCc
Confidence 347899999999999999999998763 688888753
No 344
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.87 E-value=0.0061 Score=58.37 Aligned_cols=53 Identities=15% Similarity=0.234 Sum_probs=42.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.+||+||||.|.+|..++..|...|. ++.++|+++. .+..+++++||+
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~-------~V~~~d~~~~-------------------------~~~~~~~~~aDl 145 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY-------QVRILEQDDW-------------------------DRAEDILADAGM 145 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC-------eEEEeCCCcc-------------------------hhHHHHHhcCCE
Confidence 37999999789999999999998763 7999997520 123466789999
Q ss_pred EEEeC
Q 020022 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||++.
T Consensus 146 Vilav 150 (374)
T PRK11199 146 VIVSV 150 (374)
T ss_pred EEEeC
Confidence 99984
No 345
>PRK12743 oxidoreductase; Provisional
Probab=96.85 E-value=0.071 Score=47.75 Aligned_cols=118 Identities=12% Similarity=0.104 Sum_probs=61.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hh----
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AV---- 76 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~---- 76 (332)
+++|.|+||+|.+|++++..|+..|. ++.+.+... .+.++....++..... ...-+... ++ ..
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-------~V~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~ 72 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-------DIGITWHSD-EEGAKETAEEVRSHGV-RAEIRQLDLSDLPEGAQALD 72 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCC-hHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHH
Confidence 35899999999999999999998763 576665432 2223222222221110 00001110 11 11
Q ss_pred ---hhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHH----hhcCCCeEEEEecC
Q 020022 77 ---EACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALE----QHAAPNCKVLVVAN 132 (332)
Q Consensus 77 ---~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~----~~~~~~~~viv~tN 132 (332)
+.+...|+||+.+|..... ..+. ...+..|+.....+.+.+. +.. +.+++|++|.
T Consensus 73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~g~ii~isS 140 (256)
T PRK12743 73 KLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQG-QGGRIINITS 140 (256)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEEEee
Confidence 1224579999999875321 1222 2345566654444444433 322 2356777765
No 346
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.85 E-value=0.019 Score=50.70 Aligned_cols=148 Identities=14% Similarity=0.057 Sum_probs=76.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCC-------hh
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTD-------AV 76 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~-------~~ 76 (332)
++++.|+||+|.+|.+++..|+..|. ++.+.|+++. + . ..++.+... ....++....+ ..
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~-~-~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 69 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-------PVIVSYRTHY-P-A---IDGLRQAGAQCIQADFSTNAGIMAFIDELK 69 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-------eEEEEeCCch-h-H---HHHHHHcCCEEEEcCCCCHHHHHHHHHHHH
Confidence 35799999999999999999998763 6888888742 1 1 111211100 00001100001 11
Q ss_pred hhcCCCcEEEEeCCCCCC--C-CCCH---HHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHHHHHHhCC
Q 020022 77 EACTGVNIAVMVGGFPRK--E-GMER---KDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNALILKEFAP 146 (332)
Q Consensus 77 ~al~~aDiVi~~ag~~~~--~-~~~r---~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~~~ 146 (332)
+.+...|++|+.+|.... + ..+. +..+..|+... +.+.+.+.+...+.+.++++|.... . .
T Consensus 70 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~-------~--~ 140 (236)
T PRK06483 70 QHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV-------E--K 140 (236)
T ss_pred hhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh-------c--c
Confidence 223458999999986422 1 1222 23344555433 3444444443211245666553211 1 1
Q ss_pred CCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 147 SIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 147 ~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
+.+..-.++.++.--..+-+.+++.+.
T Consensus 141 ~~~~~~~Y~asKaal~~l~~~~a~e~~ 167 (236)
T PRK06483 141 GSDKHIAYAASKAALDNMTLSFAAKLA 167 (236)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHC
Confidence 222222455566555677777888775
No 347
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.84 E-value=0.005 Score=54.52 Aligned_cols=35 Identities=23% Similarity=0.133 Sum_probs=29.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
+++|.|+||+|.+|++++..|+..|. .+.+.++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~-------~vi~~~r~~ 36 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGY-------RVIATYFSG 36 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEeCCc
Confidence 35899999999999999999998763 688888874
No 348
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.017 Score=53.25 Aligned_cols=119 Identities=23% Similarity=0.187 Sum_probs=64.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC--Ch-------
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT--DA------- 75 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~--~~------- 75 (332)
.++|.|+||+|.+|..++..|+..|. ++.+.++++ +.++....++............++. +.
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGA-------KLALVDLEE--AELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEA 79 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999998774 789999874 3443333333211000000011110 11
Q ss_pred hhhcCCCcEEEEeCCCCCCC---CCCH---HHHHHhhHHHHHHHHHHHHhhc-CCCeEEEEecC
Q 020022 76 VEACTGVNIAVMVGGFPRKE---GMER---KDVMSKNVSIYKAQASALEQHA-APNCKVLVVAN 132 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~~---~~~r---~~~~~~n~~i~~~i~~~i~~~~-~~~~~viv~tN 132 (332)
.+.+...|+||+.+|..... ..+. ...+..|+.....+.+.+..+. .+.+.++++|.
T Consensus 80 ~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 80 VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 12235689999999975321 1222 2345566655544444443221 11245666664
No 349
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.83 E-value=0.013 Score=52.77 Aligned_cols=155 Identities=15% Similarity=0.241 Sum_probs=78.9
Q ss_pred CCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCC----
Q 020022 4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTD---- 74 (332)
Q Consensus 4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~---- 74 (332)
+.+.+.|+||+ +.+|..++..|+..|. ++.+.+++.+..+.+....++.+.... ...++.-..+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~ 77 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-------ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEET 77 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHH
Confidence 45678999975 6899999999998764 677776542111222112222211000 0001100001
Q ss_pred ---hhhhcCCCcEEEEeCCCCCC-----C--CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccch
Q 020022 75 ---AVEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTN 137 (332)
Q Consensus 75 ---~~~al~~aDiVi~~ag~~~~-----~--~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~ 137 (332)
..+.+...|++|+.+|.... + ..+.+ ..+..|+ ...+.+.+.+++ .++|+++|.....
T Consensus 78 ~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~----~g~Iv~isS~~~~- 152 (258)
T PRK07370 78 FETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE----GGSIVTLTYLGGV- 152 (258)
T ss_pred HHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh----CCeEEEEeccccc-
Confidence 11223468999999997531 1 11222 3344454 334555555542 2467777643221
Q ss_pred HHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 138 ALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 138 ~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.|..-.++.++.--..+-+.++..++ +..|+
T Consensus 153 --------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~ 185 (258)
T PRK07370 153 --------RAIPNYNVMGVAKAALEASVRYLAAELG--PKNIR 185 (258)
T ss_pred --------cCCcccchhhHHHHHHHHHHHHHHHHhC--cCCeE
Confidence 1122222355556555677777877775 45665
No 350
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.83 E-value=0.01 Score=53.46 Aligned_cols=35 Identities=17% Similarity=0.234 Sum_probs=29.3
Q ss_pred CcEEEEEcC--CCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 5 PVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 5 ~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
.+++.|+|| ++.+|.+++..|+..|. .|++.|++.
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~G~-------~v~l~~r~~ 43 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQGA-------EVVLTGFGR 43 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHCCC-------EEEEecCcc
Confidence 468999998 68999999999998764 688988753
No 351
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.032 Score=51.93 Aligned_cols=162 Identities=10% Similarity=0.036 Sum_probs=86.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE---ee-CC------
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV---AT-TD------ 74 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~---~~-~~------ 74 (332)
.+++.|+||+|.+|.+++..|+..|. +|++.+++. ++++....++.... +. .++. .. ++
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~-------~Vil~~R~~--~~~~~~~~~l~~~~-~~-~~v~~~~~Dl~d~~sv~~ 82 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGA-------EVILPVRNR--AKGEAAVAAIRTAV-PD-AKLSLRALDLSSLASVAA 82 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHHhC-CC-CceEEEEecCCCHHHHHH
Confidence 46899999999999999999998763 788998874 34433333332211 00 0111 10 11
Q ss_pred ----hhhhcCCCcEEEEeCCCCCCC--CC---CHHHHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcccchHHHH
Q 020022 75 ----AVEACTGVNIAVMVGGFPRKE--GM---ERKDVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPANTNALIL 141 (332)
Q Consensus 75 ----~~~al~~aDiVi~~ag~~~~~--~~---~r~~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~ 141 (332)
..+.....|++|+.||....+ .. ..+..+..|.- +.+.+.+.+++. .++|+++|.-.......-
T Consensus 83 ~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~---~~riv~vsS~~~~~~~~~ 159 (313)
T PRK05854 83 LGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG---RARVTSQSSIAARRGAIN 159 (313)
T ss_pred HHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC---CCCeEEEechhhcCCCcC
Confidence 112234589999999974322 11 22334555543 355555555442 245666654322110000
Q ss_pred H-H--hCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 142 K-E--FAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 142 ~-~--~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
. . ....++....++.+++-...+-+.+++++......|+
T Consensus 160 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~ 201 (313)
T PRK05854 160 WDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGIT 201 (313)
T ss_pred cccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeE
Confidence 0 0 0001222234666777767777778876655455665
No 352
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.034 Score=49.20 Aligned_cols=121 Identities=12% Similarity=0.051 Sum_probs=67.5
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe----eCCh-
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA----TTDA- 75 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~----~~~~- 75 (332)
|+.+.+.+.|+||++.+|.+++..|+..|. .|.++++++ +.++....++...... ...+.. ..+.
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~-------~V~~~~r~~--~~l~~~~~~i~~~~~~-~~~~~~D~~~~~~~~ 70 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGA-------TLILCDQDQ--SALKDTYEQCSALTDN-VYSFQLKDFSQESIR 70 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhcCCC-eEEEEccCCCHHHHH
Confidence 666667999999999999999999998874 789998874 4443333333221100 000100 0011
Q ss_pred ------hhhcC-CCcEEEEeCCCCCCC----CCCHHHH---HHhhH----HHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 76 ------VEACT-GVNIAVMVGGFPRKE----GMERKDV---MSKNV----SIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 76 ------~~al~-~aDiVi~~ag~~~~~----~~~r~~~---~~~n~----~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+.+. ..|++|+.+|....+ ..+.+++ +..|. ...+.+.+.+.+.. +.+.|+++|.
T Consensus 71 ~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS 144 (227)
T PRK08862 71 HLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRN-KKGVIVNVIS 144 (227)
T ss_pred HHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCceEEEEec
Confidence 12234 689999999753222 1233332 22333 34455566666543 2356777764
No 353
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=96.81 E-value=0.0014 Score=59.05 Aligned_cols=168 Identities=15% Similarity=0.126 Sum_probs=79.6
Q ss_pred EEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhhc--C----CccceEe-eCC-------
Q 020022 10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAF--P----LLKGVVA-TTD------- 74 (332)
Q Consensus 10 IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~~--~----~~~~~~~-~~~------- 74 (332)
||||+||+|+++...|+..+- . .+|.++-+..+..... .....+.+... . ...++++ ..|
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~---~--~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPP---D--VKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS----T--TEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHcCCC---C--cEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 699999999999999887642 1 1466665554221111 11111111000 0 0122222 112
Q ss_pred ----hhhhc-CCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHH------
Q 020022 75 ----AVEAC-TGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKE------ 143 (332)
Q Consensus 75 ----~~~al-~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~------ 143 (332)
.++.+ +.+|+|||+|+.-. ...+..++...|+..++++++...+... ..++.+|. .-+....-..
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~-~~~~~~~~~~~NV~gt~~ll~la~~~~~--~~~~~iST-a~v~~~~~~~~~~~~~ 151 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVN-FNAPYSELRAVNVDGTRNLLRLAAQGKR--KRFHYIST-AYVAGSRPGTIEEKVY 151 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-S-BS-S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEE-GGGTTS-TTT--SSS-
T ss_pred CChHHhhccccccceeeecchhhh-hcccchhhhhhHHHHHHHHHHHHHhccC--cceEEecc-ccccCCCCCccccccc
Confidence 23333 68999999987542 2234455678899999999999886442 25666665 2111110000
Q ss_pred --hCCCC-CCCc---EEEechHHHHHHHHHHHHHcCCCCCCeeeeEEEe
Q 020022 144 --FAPSI-PAKN---ITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWG 186 (332)
Q Consensus 144 --~~~~~-~~~~---i~~~t~lds~r~~~~la~~l~v~~~~v~~~~v~G 186 (332)
..... +... -+.-++..+.++.+..+++.|++..=++...|.|
T Consensus 152 ~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 152 PEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG 200 (249)
T ss_dssp HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred ccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence 00000 1112 3455788888888888888888877777666555
No 354
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.79 E-value=0.012 Score=51.35 Aligned_cols=34 Identities=26% Similarity=0.445 Sum_probs=30.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (332)
..||+|+| +|.+|+.++..|+..|+ + +++|+|.+
T Consensus 21 ~~~V~IvG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICG-LGGLGSNVAINLARAGI-G-----KLILVDFD 54 (200)
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHcCC-C-----EEEEECCC
Confidence 46999999 69999999999999885 3 79999987
No 355
>PLN02256 arogenate dehydrogenase
Probab=96.79 E-value=0.015 Score=54.07 Aligned_cols=65 Identities=15% Similarity=0.254 Sum_probs=43.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc-CCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-TGV 82 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al-~~a 82 (332)
+.+||+||| .|.+|..++..|...|. +|..+|.+. . ...+.++ .+...++..+.+ .++
T Consensus 35 ~~~kI~IIG-~G~mG~slA~~L~~~G~-------~V~~~d~~~--~--~~~a~~~---------gv~~~~~~~e~~~~~a 93 (304)
T PLN02256 35 RKLKIGIVG-FGNFGQFLAKTFVKQGH-------TVLATSRSD--Y--SDIAAEL---------GVSFFRDPDDFCEEHP 93 (304)
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCC-------EEEEEECcc--H--HHHHHHc---------CCeeeCCHHHHhhCCC
Confidence 457999999 79999999999987652 788999873 1 1111111 111234555555 479
Q ss_pred cEEEEeC
Q 020022 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+||++.
T Consensus 94 DvVilav 100 (304)
T PLN02256 94 DVVLLCT 100 (304)
T ss_pred CEEEEec
Confidence 9999984
No 356
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.79 E-value=0.0093 Score=55.63 Aligned_cols=102 Identities=18% Similarity=0.246 Sum_probs=62.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
..+||+|+| +|.+|..++..|...+. . +|.++|+++ +++...+..+.. .+....+..+++.++|
T Consensus 177 ~~~~V~ViG-aG~iG~~~a~~L~~~g~-~-----~V~v~~r~~--~ra~~la~~~g~-------~~~~~~~~~~~l~~aD 240 (311)
T cd05213 177 KGKKVLVIG-AGEMGELAAKHLAAKGV-A-----EITIANRTY--ERAEELAKELGG-------NAVPLDELLELLNEAD 240 (311)
T ss_pred cCCEEEEEC-cHHHHHHHHHHHHHcCC-C-----EEEEEeCCH--HHHHHHHHHcCC-------eEEeHHHHHHHHhcCC
Confidence 357999999 69999999988887542 1 689999874 333322222211 1111234677889999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
+||.+.+.+.. ........ .....++.+++-+++|-|+
T Consensus 241 vVi~at~~~~~------------~~~~~~~~---~~~~~~~~~viDlavPrdi 278 (311)
T cd05213 241 VVISATGAPHY------------AKIVERAM---KKRSGKPRLIVDLAVPRDI 278 (311)
T ss_pred EEEECCCCCch------------HHHHHHHH---hhCCCCCeEEEEeCCCCCC
Confidence 99999765521 11111211 1111134677789999884
No 357
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.78 E-value=0.008 Score=53.21 Aligned_cols=94 Identities=19% Similarity=0.186 Sum_probs=55.3
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeCChhhhcCCCcEEE
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATTDAVEACTGVNIAV 86 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~~~~~al~~aDiVi 86 (332)
|+|+||+|.+|+.++..|+..+. +|+.+=++++.+.. ..+.+..... ..++.-...+.++++|+|.||
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-------~V~~l~R~~~~~~~----~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~ 69 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-------SVRALVRDPSSDRA----QQLQALGAEVVEADYDDPESLVAALKGVDAVF 69 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-------CEEEEESSSHHHHH----HHHHHTTTEEEES-TT-HHHHHHHHTTCSEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCC-------CcEEEEeccchhhh----hhhhcccceEeecccCCHHHHHHHHcCCceEE
Confidence 78999999999999999998542 56666665421111 1222211100 001111124668899999999
Q ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcC
Q 020022 87 MVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 122 (332)
Q Consensus 87 ~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~ 122 (332)
++-+... . .-.+..+.+++...+.+-
T Consensus 70 ~~~~~~~---~-------~~~~~~~~li~Aa~~agV 95 (233)
T PF05368_consen 70 SVTPPSH---P-------SELEQQKNLIDAAKAAGV 95 (233)
T ss_dssp EESSCSC---C-------CHHHHHHHHHHHHHHHT-
T ss_pred eecCcch---h-------hhhhhhhhHHHhhhcccc
Confidence 9866442 1 123445577777777763
No 358
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.77 E-value=0.0079 Score=54.00 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=31.0
Q ss_pred CCCC--CcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022 1 MAKE--PVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (332)
Q Consensus 1 m~~~--~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (332)
|+++ .+.+.|+||+ +.+|..++..|+..|. +|.+.+++
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~-------~Vi~~~r~ 42 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGA-------TVIYTYQN 42 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCC-------EEEEecCc
Confidence 6653 4689999987 6899999999998774 68888876
No 359
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.76 E-value=0.012 Score=53.82 Aligned_cols=66 Identities=12% Similarity=0.118 Sum_probs=41.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||+||| .|.+|..++..|...+.. .+|..+|+++ +.++. +.+... .....+..+ +.+||+|
T Consensus 1 m~I~iIG-~G~mG~sla~~l~~~g~~-----~~v~~~d~~~--~~~~~----~~~~g~-----~~~~~~~~~-~~~aD~V 62 (275)
T PRK08507 1 MKIGIIG-LGLMGGSLGLALKEKGLI-----SKVYGYDHNE--LHLKK----ALELGL-----VDEIVSFEE-LKKCDVI 62 (275)
T ss_pred CEEEEEc-cCHHHHHHHHHHHhcCCC-----CEEEEEcCCH--HHHHH----HHHCCC-----CcccCCHHH-HhcCCEE
Confidence 4899999 799999999999987641 2688899874 32221 111110 001123444 3469999
Q ss_pred EEeC
Q 020022 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 63 ilav 66 (275)
T PRK08507 63 FLAI 66 (275)
T ss_pred EEeC
Confidence 9984
No 360
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.74 E-value=0.013 Score=57.40 Aligned_cols=117 Identities=27% Similarity=0.300 Sum_probs=66.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC--Chh------
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT--DAV------ 76 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~--~~~------ 76 (332)
.+++.|+||+|.+|..++..|+..|. ++.++|.....+.+.....++. .. .....++. ...
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga-------~vi~~~~~~~~~~l~~~~~~~~---~~-~~~~Dv~~~~~~~~~~~~~ 278 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGA-------HVVCLDVPAAGEALAAVANRVG---GT-ALALDITAPDAPARIAEHL 278 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-------EEEEEeCCccHHHHHHHHHHcC---Ce-EEEEeCCCHHHHHHHHHHH
Confidence 36899999999999999999998764 7888887532222221111111 00 00011110 111
Q ss_pred -hhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHh--hcCCCeEEEEecC
Q 020022 77 -EACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQ--HAAPNCKVLVVAN 132 (332)
Q Consensus 77 -~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~--~~~~~~~viv~tN 132 (332)
+.....|+||+++|..... ..+ ....+..|+.-...+.+.+.. ...+..+++++|.
T Consensus 279 ~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 279 AERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 1123589999999976422 122 234456777777777666654 2123456777764
No 361
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=96.74 E-value=0.014 Score=52.89 Aligned_cols=63 Identities=22% Similarity=0.240 Sum_probs=44.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
..|||+||| +|.+|++++..|...+...+ -++..+|+++ +.+ .+....+..++++++|
T Consensus 2 ~~mkI~iIG-~G~mG~ai~~~l~~~~~~~~---~~i~~~~~~~--~~~----------------~~~~~~~~~~~~~~~D 59 (260)
T PTZ00431 2 ENIRVGFIG-LGKMGSALAYGIENSNIIGK---ENIYYHTPSK--KNT----------------PFVYLQSNEELAKTCD 59 (260)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHhCCCCCc---ceEEEECCCh--hcC----------------CeEEeCChHHHHHhCC
Confidence 346999999 79999999999998764321 1588888763 211 0112345566778999
Q ss_pred EEEEe
Q 020022 84 IAVMV 88 (332)
Q Consensus 84 iVi~~ 88 (332)
+||++
T Consensus 60 ~Vila 64 (260)
T PTZ00431 60 IIVLA 64 (260)
T ss_pred EEEEE
Confidence 99988
No 362
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.044 Score=48.97 Aligned_cols=148 Identities=9% Similarity=0.029 Sum_probs=77.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC---hhh----
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---AVE---- 77 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---~~~---- 77 (332)
+++.|+||+|.+|.+++..|+..|. .|.+.|++. +.++....++.... ....-+... ++ ..+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~-------~Vi~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~ 71 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA-------NVVITGRTK--EKLEEAKLEIEQFP-GQVLTVQMDVRNPEDVQKMVEQ 71 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHH
Confidence 5789999999999999999998764 688999874 33333333332211 000001110 11 111
Q ss_pred ---hcCCCcEEEEeCCCCCC-C--CCCH---HHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcccchHHHHHHh
Q 020022 78 ---ACTGVNIAVMVGGFPRK-E--GMER---KDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 78 ---al~~aDiVi~~ag~~~~-~--~~~r---~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~~~~~~~~~~~ 144 (332)
.+...|+||+.+|.... + ..+. ...+..|+...-.+.+.+ .+.. +.+.++++|.-.. ..
T Consensus 72 ~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~ii~isS~~~-------~~ 143 (252)
T PRK07677 72 IDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKG-IKGNIINMVATYA-------WD 143 (252)
T ss_pred HHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CCEEEEEEcChhh-------cc
Confidence 12467999999885321 1 2233 334566665444444444 3322 2356777763211 00
Q ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHcC
Q 020022 145 APSIPAKNITCLTRLDHNRALGQISEKLN 173 (332)
Q Consensus 145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~ 173 (332)
+. +..-.++.+......+-+.+|+.+.
T Consensus 144 -~~-~~~~~Y~~sKaa~~~~~~~la~e~~ 170 (252)
T PRK07677 144 -AG-PGVIHSAAAKAGVLAMTRTLAVEWG 170 (252)
T ss_pred -CC-CCCcchHHHHHHHHHHHHHHHHHhC
Confidence 11 1111244455555566667777654
No 363
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.72 E-value=0.0049 Score=56.33 Aligned_cols=74 Identities=22% Similarity=0.274 Sum_probs=46.0
Q ss_pred CC-CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEE-EEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022 1 MA-KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA 78 (332)
Q Consensus 1 m~-~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a 78 (332)
|+ |+++||+||| .|.+|+.++..|... . + ..++ .++|+++ ++.+..+..+. . ....++..+.
T Consensus 1 ~~~m~~irIGIIG-~G~IG~~~a~~L~~~-~--~--~~el~aV~dr~~--~~a~~~a~~~g---~-----~~~~~~~eel 64 (271)
T PRK13302 1 MSSRPELRVAIAG-LGAIGKAIAQALDRG-L--P--GLTLSAVAVRDP--QRHADFIWGLR---R-----PPPVVPLDQL 64 (271)
T ss_pred CCCCCeeEEEEEC-ccHHHHHHHHHHHhc-C--C--CeEEEEEECCCH--HHHHHHHHhcC---C-----CcccCCHHHH
Confidence 55 3568999999 799999999888753 0 0 1244 4788864 33322211111 0 0123456677
Q ss_pred cCCCcEEEEeCC
Q 020022 79 CTGVNIAVMVGG 90 (332)
Q Consensus 79 l~~aDiVi~~ag 90 (332)
+.++|+|++++.
T Consensus 65 l~~~D~Vvi~tp 76 (271)
T PRK13302 65 ATHADIVVEAAP 76 (271)
T ss_pred hcCCCEEEECCC
Confidence 789999999964
No 364
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.72 E-value=0.018 Score=51.84 Aligned_cols=36 Identities=19% Similarity=0.091 Sum_probs=29.3
Q ss_pred CCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
+.+.+.|+||+ +.+|.+++..|+..|. .|.+.|+++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-------~v~l~~r~~ 46 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-------ELAVTYLND 46 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-------EEEEEeCCh
Confidence 34678999976 3899999999998763 688888874
No 365
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.70 E-value=0.0085 Score=55.37 Aligned_cols=63 Identities=24% Similarity=0.358 Sum_probs=44.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||+||| .|.||+.++..|+..|. ++..+|+++ . .+ .+... ......+..++.++||+|
T Consensus 1 m~Ig~IG-lG~MG~~ma~~L~~~G~-------~v~v~~~~~--~-~~----~~~~~------g~~~~~s~~~~~~~advV 59 (292)
T PRK15059 1 MKLGFIG-LGIMGTPMAINLARAGH-------QLHVTTIGP--V-AD----ELLSL------GAVSVETARQVTEASDII 59 (292)
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCCC-------eEEEEeCCH--h-HH----HHHHc------CCeecCCHHHHHhcCCEE
Confidence 3899999 79999999999998763 688999863 1 11 12211 112234566778999999
Q ss_pred EEeC
Q 020022 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 60 i~~v 63 (292)
T PRK15059 60 FIMV 63 (292)
T ss_pred EEeC
Confidence 9984
No 366
>PLN02503 fatty acyl-CoA reductase 2
Probab=96.68 E-value=0.011 Score=59.92 Aligned_cols=111 Identities=20% Similarity=0.166 Sum_probs=65.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhccc-CCCCCceEEEEEeCCCchhhh-hhhHHHHhhhh--------cC------Cccc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVM-LGTDQPVILHMLDIPPAAEAL-NGVKMELVDAA--------FP------LLKG 68 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~-~~~~~~~ei~L~D~~~~~~~l-~~~~~dl~~~~--------~~------~~~~ 68 (332)
.++|.|+||+||+|++++..|+...- .. +|.++.+..+.+.. +....++.+.. .+ ...+
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~-----kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K 193 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDVG-----KIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSK 193 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCCc-----EEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence 57999999999999999999886431 11 56777664321111 11101111100 00 0111
Q ss_pred eEe-eCC-----------h-hhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhc
Q 020022 69 VVA-TTD-----------A-VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA 121 (332)
Q Consensus 69 ~~~-~~~-----------~-~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~ 121 (332)
+.. ..| . ....+++|+|||+|+... ...+.......|+...+++.+.+.+..
T Consensus 194 i~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~~ 258 (605)
T PLN02503 194 LVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKCK 258 (605)
T ss_pred EEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 211 111 1 223367999999988653 334566778889999999999887753
No 367
>PRK05599 hypothetical protein; Provisional
Probab=96.67 E-value=0.082 Score=47.19 Aligned_cols=153 Identities=14% Similarity=0.199 Sum_probs=81.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE--eeC---------C
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV--ATT---------D 74 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~--~~~---------~ 74 (332)
|.+.|+||++.+|.+++..|++ |. .+.+.++++ +.++....++..........+. ++. .
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 70 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE-------DVVLAARRP--EAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQ 70 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC-------EEEEEeCCH--HHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHH
Confidence 3589999999999999999884 42 688998874 4555444444332100000011 100 1
Q ss_pred hhhhcCCCcEEEEeCCCCCCCC---CCH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022 75 AVEACTGVNIAVMVGGFPRKEG---MER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 75 ~~~al~~aDiVi~~ag~~~~~~---~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~ 144 (332)
..+.+...|++|+.+|...... .+. .+....|. ...+.+.+.+.+.. +.+.|+++|.-...
T Consensus 71 ~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~~g~Iv~isS~~~~-------- 141 (246)
T PRK05599 71 TQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT-APAAIVAFSSIAGW-------- 141 (246)
T ss_pred HHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC-CCCEEEEEeccccc--------
Confidence 1222346899999999753211 111 12222232 33445556665543 23567777754331
Q ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.|..-.++.+.--...+-+.++..++ +..|+
T Consensus 142 -~~~~~~~~Y~asKaa~~~~~~~la~el~--~~~I~ 174 (246)
T PRK05599 142 -RARRANYVYGSTKAGLDAFCQGLADSLH--GSHVR 174 (246)
T ss_pred -cCCcCCcchhhHHHHHHHHHHHHHHHhc--CCCce
Confidence 1112122455566555667777777764 34555
No 368
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.027 Score=51.30 Aligned_cols=115 Identities=19% Similarity=0.206 Sum_probs=60.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeC--Chhhh-----
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATT--DAVEA----- 78 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~--~~~~a----- 78 (332)
.+.|+| +|.+|.+++..|. .|. +|++.|+++ +.++....++.+..... .....++. +...+
T Consensus 4 ~~lItG-a~gIG~~la~~l~-~G~-------~Vv~~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~ 72 (275)
T PRK06940 4 VVVVIG-AGGIGQAIARRVG-AGK-------KVLLADYNE--ENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQ 72 (275)
T ss_pred EEEEEC-CChHHHHHHHHHh-CCC-------EEEEEeCCH--HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHH
Confidence 567778 5899999999985 442 789999874 33332222332210000 00111110 11111
Q ss_pred -cCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022 79 -CTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 79 -l~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP 133 (332)
+...|++|+.||... ...+....+..|+...-.+.+.+...-.+...+++++..
T Consensus 73 ~~g~id~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 73 TLGPVTGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred hcCCCCEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 246899999999753 223455667777766555555544432122334555543
No 369
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.67 E-value=0.011 Score=48.72 Aligned_cols=76 Identities=14% Similarity=0.119 Sum_probs=49.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
+.++|+|+| +|.+|..++..|...+ .. ++.++|++. ++++..+.++.... ... ...+..+.++++|
T Consensus 18 ~~~~i~iiG-~G~~g~~~a~~l~~~g-~~-----~v~v~~r~~--~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~D 83 (155)
T cd01065 18 KGKKVLILG-AGGAARAVAYALAELG-AA-----KIVIVNRTL--EKAKALAERFGELG----IAI-AYLDLEELLAEAD 83 (155)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCC-CC-----EEEEEcCCH--HHHHHHHHHHhhcc----cce-eecchhhccccCC
Confidence 357999999 5999999999998764 12 799999874 33333333222110 011 1235556689999
Q ss_pred EEEEeCCCCC
Q 020022 84 IAVMVGGFPR 93 (332)
Q Consensus 84 iVi~~ag~~~ 93 (332)
+||.+.....
T Consensus 84 vvi~~~~~~~ 93 (155)
T cd01065 84 LIINTTPVGM 93 (155)
T ss_pred EEEeCcCCCC
Confidence 9999876543
No 370
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.66 E-value=0.0085 Score=51.73 Aligned_cols=76 Identities=18% Similarity=0.201 Sum_probs=48.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-----CChhhh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-----TDAVEA 78 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-----~~~~~a 78 (332)
+.+++.|+||+|.+|..++..|+..+. ++.+++++. ++++....++.+.. ...+... .+..++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-------~V~l~~R~~--~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~ 94 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-------RVVLVGRDL--ERAQKAADSLRARF---GEGVGAVETSDDAARAAA 94 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEcCCH--HHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHH
Confidence 347999999889999999999987652 689998873 44443333332111 1111111 123478
Q ss_pred cCCCcEEEEeCCC
Q 020022 79 CTGVNIAVMVGGF 91 (332)
Q Consensus 79 l~~aDiVi~~ag~ 91 (332)
++++|+||.+...
T Consensus 95 ~~~~diVi~at~~ 107 (194)
T cd01078 95 IKGADVVFAAGAA 107 (194)
T ss_pred HhcCCEEEECCCC
Confidence 8999998886543
No 371
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=96.64 E-value=0.023 Score=50.94 Aligned_cols=75 Identities=21% Similarity=0.266 Sum_probs=44.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
++||+|.||+|.||+.++..+.+.+-+ . =+..+|..+. . . ...|...........+.++.++.....++|+
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~----~-L~aa~~~~~~-~-~--~g~d~ge~~g~~~~gv~v~~~~~~~~~~~DV 72 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDL----E-LVAAFDRPGS-L-S--LGSDAGELAGLGLLGVPVTDDLLLVKADADV 72 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCc----e-EEEEEecCCc-c-c--cccchhhhccccccCceeecchhhcccCCCE
Confidence 579999999999999999999876421 1 1455666531 1 1 1122222221112233444556666788888
Q ss_pred EEEe
Q 020022 85 AVMV 88 (332)
Q Consensus 85 Vi~~ 88 (332)
+|=.
T Consensus 73 ~IDF 76 (266)
T COG0289 73 LIDF 76 (266)
T ss_pred EEEC
Confidence 8754
No 372
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.64 E-value=0.015 Score=52.63 Aligned_cols=159 Identities=19% Similarity=0.193 Sum_probs=78.8
Q ss_pred CCC-CCcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-C--CccceEeeCC
Q 020022 1 MAK-EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-P--LLKGVVATTD 74 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~--~~~~~~~~~~ 74 (332)
|.+ +.+.+.|+||++ .+|.+++..|++.|. .|.+.+++. +++....++..... . ...++....+
T Consensus 1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~G~-------~vil~~r~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 70 (262)
T PRK07984 1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGA-------ELAFTYQND---KLKGRVEEFAAQLGSDIVLPCDVAEDAS 70 (262)
T ss_pred CcccCCCEEEEeCCCCCccHHHHHHHHHHHCCC-------EEEEEecch---hHHHHHHHHHhccCCceEeecCCCCHHH
Confidence 544 336788999764 799999999998773 688888752 22222222322100 0 0001100001
Q ss_pred h-------hhhcCCCcEEEEeCCCCCCC--------CCCHH---HHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 75 A-------VEACTGVNIAVMVGGFPRKE--------GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 75 ~-------~~al~~aDiVi~~ag~~~~~--------~~~r~---~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
. .+.+...|++|+.||+.... +.+.+ ..+..|+...-.+.+.+...-.+.+.|+++|.-...
T Consensus 71 v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~ 150 (262)
T PRK07984 71 IDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE 150 (262)
T ss_pred HHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC
Confidence 1 11233579999999974311 12222 234556543323333322221123566666642210
Q ss_pred hHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 137 NALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 137 ~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
...|....++.++.--..+-+.+|..+. +.+|+
T Consensus 151 ---------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr 183 (262)
T PRK07984 151 ---------RAIPNYNVMGLAKASLEANVRYMANAMG--PEGVR 183 (262)
T ss_pred ---------CCCCCcchhHHHHHHHHHHHHHHHHHhc--ccCcE
Confidence 1112112345556555677777887764 34565
No 373
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.019 Score=50.28 Aligned_cols=114 Identities=20% Similarity=0.139 Sum_probs=62.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcC-CccceEeeCChhh---hcC-
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFP-LLKGVVATTDAVE---ACT- 80 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~-~~~~~~~~~~~~~---al~- 80 (332)
+++.|+||+|.+|++++..|+..|. ++.++|++. +.++ ++...... ...++....+..+ .+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-------~v~~~~r~~--~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 68 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-------RVIATARDA--AALA----ALQALGAEALALDVADPASVAGLAWKLDG 68 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-------EEEEEECCH--HHHH----HHHhccceEEEecCCCHHHHHHHHHHhcC
Confidence 4799999999999999999987763 789999874 2222 11111000 0001111111111 133
Q ss_pred -CCcEEEEeCCCCCC---C--CCCH---HHHHHhhHHHHHHHHHHHHhhcC-CCeEEEEecC
Q 020022 81 -GVNIAVMVGGFPRK---E--GMER---KDVMSKNVSIYKAQASALEQHAA-PNCKVLVVAN 132 (332)
Q Consensus 81 -~aDiVi~~ag~~~~---~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~-~~~~viv~tN 132 (332)
..|+||+++|.... + ..+. +..+..|+.....+.+.+.++-. ....+++++.
T Consensus 69 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS 130 (222)
T PRK06953 69 EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSS 130 (222)
T ss_pred CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcC
Confidence 47999999987521 1 1132 34456777666666555544311 1234555553
No 374
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.60 E-value=0.024 Score=51.91 Aligned_cols=69 Identities=16% Similarity=0.352 Sum_probs=44.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhhcCCccceEeeCC-hhhhcCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFPLLKGVVATTD-AVEACTG 81 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~~~~~~~~~~~~~-~~~al~~ 81 (332)
..+||+|+| .|.||..++..|...|. .+..++.+.+.+.++ +..+++.+. .+.+ ..++.++
T Consensus 2 ~~~~v~IvG-~GliG~s~a~~l~~~g~-------~v~i~g~d~~~~~~~~a~~lgv~d~---------~~~~~~~~~~~~ 64 (279)
T COG0287 2 ASMKVGIVG-LGLMGGSLARALKEAGL-------VVRIIGRDRSAATLKAALELGVIDE---------LTVAGLAEAAAE 64 (279)
T ss_pred CCcEEEEEC-CchHHHHHHHHHHHcCC-------eEEEEeecCcHHHHHHHhhcCcccc---------cccchhhhhccc
Confidence 357999999 79999999999999875 455666554222221 111222221 1122 2677889
Q ss_pred CcEEEEeC
Q 020022 82 VNIAVMVG 89 (332)
Q Consensus 82 aDiVi~~a 89 (332)
||+||++.
T Consensus 65 aD~Vivav 72 (279)
T COG0287 65 ADLVIVAV 72 (279)
T ss_pred CCEEEEec
Confidence 99999984
No 375
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.058 Score=48.48 Aligned_cols=153 Identities=16% Similarity=0.069 Sum_probs=77.8
Q ss_pred CcEEEEEcCCC-chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceE-eeCC------hh
Q 020022 5 PVRVLVTGAAG-QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVV-ATTD------AV 76 (332)
Q Consensus 5 ~~kI~IiGa~G-~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~-~~~~------~~ 76 (332)
.+++.|+||+| .+|.+++..|+..|. +|.+.|++. +.++....++.... . ..++. ...| ..
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~-------~V~~~~~~~--~~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~~~ 85 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGA-------RVVISDIHE--RRLGETADELAAEL-G-LGRVEAVVCDVTSEAQVD 85 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCC-------EEEEEeCCH--HHHHHHHHHHHHhc-C-CceEEEEEccCCCHHHHH
Confidence 46899999877 699999999998764 688888764 33433333332210 0 00111 1111 11
Q ss_pred h-------hcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHH----HHHHHHHHhhcCCCeEEEEecCcccchHH
Q 020022 77 E-------ACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIY----KAQASALEQHAAPNCKVLVVANPANTNAL 139 (332)
Q Consensus 77 ~-------al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~----~~i~~~i~~~~~~~~~viv~tNP~~~~~~ 139 (332)
+ .+...|++|+.+|..... ..+ ....+..|+... +.+.+.+.+.. ....+++++.....
T Consensus 86 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~g~iv~~ss~~~~--- 161 (262)
T PRK07831 86 ALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARG-HGGVIVNNASVLGW--- 161 (262)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEeCchhhc---
Confidence 1 124679999999974311 112 223344455433 34444444332 13455555532211
Q ss_pred HHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 140 ILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 140 ~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
...+..-.++.++.--..+-+.++..+. +..|+
T Consensus 162 ------~~~~~~~~Y~~sKaal~~~~~~la~e~~--~~gI~ 194 (262)
T PRK07831 162 ------RAQHGQAHYAAAKAGVMALTRCSALEAA--EYGVR 194 (262)
T ss_pred ------CCCCCCcchHHHHHHHHHHHHHHHHHhC--ccCeE
Confidence 1112222445555544566666666543 34555
No 376
>PRK06720 hypothetical protein; Provisional
Probab=96.55 E-value=0.044 Score=46.33 Aligned_cols=36 Identities=22% Similarity=0.205 Sum_probs=30.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
+.+.+.|+||+|.+|..++..|+..|. ++.+.|+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-------~V~l~~r~~ 50 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-------KVIVTDIDQ 50 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-------EEEEEECCH
Confidence 457899999989999999999998763 789999764
No 377
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.52 E-value=0.048 Score=45.17 Aligned_cols=121 Identities=21% Similarity=0.203 Sum_probs=70.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee-CC----------
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT-TD---------- 74 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~-~~---------- 74 (332)
+.+.|+||+|.+|..++..|+..+- ..+.+++++++.+.+......+.... ....-+... ++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~------~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~ 73 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA------RVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEE 73 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT------EEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc------eEEEEeeecccccccccccccccccc-cccccccccccccccccccccc
Confidence 3688999999999999999998742 16888888722233332333333111 000000100 01
Q ss_pred hhhhcCCCcEEEEeCCCCCCCC---C---CHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc
Q 020022 75 AVEACTGVNIAVMVGGFPRKEG---M---ERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN 135 (332)
Q Consensus 75 ~~~al~~aDiVi~~ag~~~~~~---~---~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~ 135 (332)
..+.....|++|+.+|...... . .....+..|+.....+.+.+.. . +.+.++++|....
T Consensus 74 ~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~-~~g~iv~~sS~~~ 138 (167)
T PF00106_consen 74 VIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-Q-GGGKIVNISSIAG 138 (167)
T ss_dssp HHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-H-TTEEEEEEEEGGG
T ss_pred cccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-c-cccceEEecchhh
Confidence 1123457899999999875221 1 1224556676666666666666 4 3567888876554
No 378
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.52 E-value=0.017 Score=54.05 Aligned_cols=65 Identities=12% Similarity=0.007 Sum_probs=44.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.+||+||| .|.+|.+++..|...|+ +++.++.+.. +....+. .. .+.. .+..+++++||+
T Consensus 17 gktIgIIG-~GsmG~AlA~~L~~sG~-------~Vvv~~r~~~--~s~~~A~---~~------G~~~-~s~~eaa~~ADV 76 (330)
T PRK05479 17 GKKVAIIG-YGSQGHAHALNLRDSGV-------DVVVGLREGS--KSWKKAE---AD------GFEV-LTVAEAAKWADV 76 (330)
T ss_pred CCEEEEEe-eHHHHHHHHHHHHHCCC-------EEEEEECCch--hhHHHHH---HC------CCee-CCHHHHHhcCCE
Confidence 47999999 79999999999988764 6777766531 1111111 11 1112 267788999999
Q ss_pred EEEeC
Q 020022 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
|+++.
T Consensus 77 VvLaV 81 (330)
T PRK05479 77 IMILL 81 (330)
T ss_pred EEEcC
Confidence 99984
No 379
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.52 E-value=0.012 Score=52.84 Aligned_cols=38 Identities=24% Similarity=0.178 Sum_probs=31.0
Q ss_pred CCCCCcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022 1 MAKEPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (332)
Q Consensus 1 m~~~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (332)
|+.+.++|.|+||+| .+|.+++..|+..|. ++.+.+++
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~-------~vi~~~r~ 40 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGI-------DIFFTYWS 40 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCC-------cEEEEcCC
Confidence 566667899999874 699999999998763 68888775
No 380
>PRK07574 formate dehydrogenase; Provisional
Probab=96.51 E-value=0.018 Score=55.15 Aligned_cols=66 Identities=18% Similarity=0.197 Sum_probs=46.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.||+.++..|..-|+ +|..+|+... . . +..... .+....++.+.++.||+
T Consensus 192 gktVGIvG-~G~IG~~vA~~l~~fG~-------~V~~~dr~~~--~-~----~~~~~~-----g~~~~~~l~ell~~aDv 251 (385)
T PRK07574 192 GMTVGIVG-AGRIGLAVLRRLKPFDV-------KLHYTDRHRL--P-E----EVEQEL-----GLTYHVSFDSLVSVCDV 251 (385)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCC--c-h----hhHhhc-----CceecCCHHHHhhcCCE
Confidence 37999999 79999999999987554 7999997631 0 1 111100 12223468889999999
Q ss_pred EEEeCC
Q 020022 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
|++..-
T Consensus 252 V~l~lP 257 (385)
T PRK07574 252 VTIHCP 257 (385)
T ss_pred EEEcCC
Confidence 999854
No 381
>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases. It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.
Probab=96.51 E-value=0.017 Score=51.48 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=51.2
Q ss_pred HHHHHHHHHHcCCCCceEEEeeeecCCC-CCCCCceEEEEeeEe-cCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 020022 250 SACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALA 327 (332)
Q Consensus 250 ~~~~~i~~~i~~~~~~~i~~~sv~~~g~-ygi~~~~~~s~Pv~~-~~Gv~~~~~~~~l~~~E~~~l~~s~~~i~~~~~~~ 327 (332)
.++++| .+| .+.++.++|..+|. -++|.|.++.+||++ ++|+.++.. .+|++....+++.....-+-.++++
T Consensus 141 ~~i~~i----~~~-~~~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~-g~lP~~~~~li~~~~~~e~L~veAa 214 (232)
T PF11975_consen 141 AAIEAI----YND-KPKRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAV-GPLPPAIAGLIQQVKAYERLTVEAA 214 (232)
T ss_dssp HHHHHH----HHS-SEEEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-S-B---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH----hcC-CCeEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 455544 456 78889999999997 789999999999998 999999776 7999999987776655554444444
No 382
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.51 E-value=0.0067 Score=55.23 Aligned_cols=119 Identities=15% Similarity=0.248 Sum_probs=71.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHhc----ccCCCCCc-eEEEEEeCCCchhhhhhhHHHHhhhhcCCccce--EeeCChhhh
Q 020022 6 VRVLVTGAAGQIGYALVPMIARG----VMLGTDQP-VILHMLDIPPAAEALNGVKMELVDAAFPLLKGV--VATTDAVEA 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~~-~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~--~~~~~~~~a 78 (332)
.||.|.| +|..|..++.+|... |+ +..+. -.+.++|.+. .+.....|+.+...++.+.. ....++.++
T Consensus 26 ~~iv~~G-AGsAg~gia~ll~~~~~~~G~-~~eeA~~~i~~vD~~G---ll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~ 100 (279)
T cd05312 26 QRILFLG-AGSAGIGIADLIVSAMVREGL-SEEEARKKIWLVDSKG---LLTKDRKDLTPFKKPFARKDEEKEGKSLLEV 100 (279)
T ss_pred cEEEEEC-cCHHHHHHHHHHHHHHHHcCC-ChhhccCeEEEEcCCC---eEeCCCCcchHHHHHHHhhcCcccCCCHHHH
Confidence 6999999 699999999888775 54 11111 1689999863 22111122222111111111 123579999
Q ss_pred cC--CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc---chHHHHHHh
Q 020022 79 CT--GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN---TNALILKEF 144 (332)
Q Consensus 79 l~--~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~---~~~~~~~~~ 144 (332)
++ ++|++|=+.+.+ |- +.+++.+.+.++| ++.+|.-.|||.. +...-+.+.
T Consensus 101 i~~v~ptvlIG~S~~~---g~-----------ft~evv~~Ma~~~-~~PIIFaLSNPt~~~E~~pe~a~~~ 156 (279)
T cd05312 101 VKAVKPTVLIGLSGVG---GA-----------FTEEVVRAMAKSN-ERPIIFALSNPTSKAECTAEDAYKW 156 (279)
T ss_pred HHhcCCCEEEEeCCCC---CC-----------CCHHHHHHHHhcC-CCCEEEECCCcCCccccCHHHHHHh
Confidence 99 889988765433 21 2347778888888 4677777899974 444444443
No 383
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.50 E-value=0.015 Score=54.53 Aligned_cols=74 Identities=22% Similarity=0.237 Sum_probs=50.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
...+++||| +|.+|...+..+....-+. +|.++|++. ++++..+.++.+. ...+....+..+++++||
T Consensus 127 ~~~~lgiiG-~G~qA~~~l~al~~~~~~~-----~v~V~~r~~--~~~~~~~~~~~~~----g~~v~~~~~~~eav~~aD 194 (325)
T TIGR02371 127 DSSVLGIIG-AGRQAWTQLEALSRVFDLE-----EVSVYCRTP--STREKFALRASDY----EVPVRAATDPREAVEGCD 194 (325)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCCC-----EEEEECCCH--HHHHHHHHHHHhh----CCcEEEeCCHHHHhccCC
Confidence 357999999 7999998666665432122 899999984 4554444444321 223556678899999999
Q ss_pred EEEEeC
Q 020022 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+.+-
T Consensus 195 iVitaT 200 (325)
T TIGR02371 195 ILVTTT 200 (325)
T ss_pred EEEEec
Confidence 999864
No 384
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.49 E-value=0.0091 Score=56.30 Aligned_cols=76 Identities=18% Similarity=0.431 Sum_probs=49.5
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCce-EEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPV-ILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC 79 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~-ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al 79 (332)
|+.+.+||+|+||+|.+|..+...|....-+. + ++.++.-.. -.|....+.. .++.+..-..+.+
T Consensus 1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~----v~~l~~~aS~~----saGk~~~~~~------~~l~v~~~~~~~~ 66 (347)
T PRK06728 1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFN----IAEVTLLSSKR----SAGKTVQFKG------REIIIQEAKINSF 66 (347)
T ss_pred CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCC----cccEEEEECcc----cCCCCeeeCC------cceEEEeCCHHHh
Confidence 77788999999999999999999988544332 2 477775432 2333332211 1333432234567
Q ss_pred CCCcEEEEeCC
Q 020022 80 TGVNIAVMVGG 90 (332)
Q Consensus 80 ~~aDiVi~~ag 90 (332)
+++|+|+++++
T Consensus 67 ~~~Divf~a~~ 77 (347)
T PRK06728 67 EGVDIAFFSAG 77 (347)
T ss_pred cCCCEEEECCC
Confidence 89999999865
No 385
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.47 E-value=0.11 Score=47.49 Aligned_cols=116 Identities=18% Similarity=0.182 Sum_probs=72.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh--hcCCccceEe-------eCChh
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA--AFPLLKGVVA-------TTDAV 76 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~--~~~~~~~~~~-------~~~~~ 76 (332)
..|.|+||++.+|..+|..++..+- .++|.|++.. -.+..+..+.+. ...+..+++- ....+
T Consensus 39 ~~vLITGgg~GlGr~ialefa~rg~-------~~vl~Din~~--~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 39 EIVLITGGGSGLGRLIALEFAKRGA-------KLVLWDINKQ--GNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVK 109 (300)
T ss_pred CEEEEeCCCchHHHHHHHHHHHhCC-------eEEEEecccc--chHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHH
Confidence 5799999988999999999998763 6999999962 222233333321 0001001100 11245
Q ss_pred hhcCCCcEEEEeCCCCC-CCC--CCHHHH---HHhh----HHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 77 EACTGVNIAVMVGGFPR-KEG--MERKDV---MSKN----VSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 77 ~al~~aDiVi~~ag~~~-~~~--~~r~~~---~~~n----~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
+...+.|++|..||+.. ++- .+++++ +..| ...++.+.+.+.+.+ ++.++.++.
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~--~GHIV~IaS 173 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN--NGHIVTIAS 173 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC--CceEEEehh
Confidence 66788999999999743 222 333322 2333 477899999999875 456666654
No 386
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=96.45 E-value=0.0086 Score=58.94 Aligned_cols=100 Identities=14% Similarity=0.099 Sum_probs=58.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChh---hhcCCCc
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAV---EACTGVN 83 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~---~al~~aD 83 (332)
+|+||| .|.||.+++..|+..|. +|.+||+++ ++.+. +.+.... ...+....+.. ++++++|
T Consensus 1 ~IG~IG-LG~MG~~mA~nL~~~G~-------~V~v~drt~--~~~~~----l~~~~~~-g~~~~~~~s~~e~v~~l~~~d 65 (467)
T TIGR00873 1 DIGVIG-LAVMGSNLALNMADHGF-------TVSVYNRTP--EKTDE----FLAEHAK-GKKIVGAYSIEEFVQSLERPR 65 (467)
T ss_pred CEEEEe-eHHHHHHHHHHHHhcCC-------eEEEEeCCH--HHHHH----HHhhccC-CCCceecCCHHHHHhhcCCCC
Confidence 489999 89999999999998763 799999974 33332 2211000 00122222333 3456799
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC--cccc
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN--PANT 136 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN--P~~~ 136 (332)
+|+++.- ++ +.+.++...+..+..++.+||..|| |.+.
T Consensus 66 vIil~v~----~~-----------~~v~~Vi~~l~~~L~~g~iIID~gns~~~~t 105 (467)
T TIGR00873 66 KIMLMVK----AG-----------APVDAVINQLLPLLEKGDIIIDGGNSHYPDT 105 (467)
T ss_pred EEEEECC----Cc-----------HHHHHHHHHHHhhCCCCCEEEECCCcCHHHH
Confidence 8888742 11 2223333445444445667777876 5553
No 387
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.45 E-value=0.02 Score=50.61 Aligned_cols=118 Identities=15% Similarity=0.116 Sum_probs=61.3
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhh-------
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVE------- 77 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~------- 77 (332)
|.|+||+|++|.+++..|+..|. ++.+.++.. .+.+.....++.+..... ..++.-..+..+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~-------~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 72 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF-------EICVHYHSG-RSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIA 72 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 57999999999999999998764 677776543 233332223332211000 000000001111
Q ss_pred hcCCCcEEEEeCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHH----HhhcCCCeEEEEecCcc
Q 020022 78 ACTGVNIAVMVGGFPRKEG---ME---RKDVMSKNVSIYKAQASAL----EQHAAPNCKVLVVANPA 134 (332)
Q Consensus 78 al~~aDiVi~~ag~~~~~~---~~---r~~~~~~n~~i~~~i~~~i----~~~~~~~~~viv~tNP~ 134 (332)
.+...|.+|+.+|...... .+ ....+..|+.....+.+.+ .+.. +...++++|...
T Consensus 73 ~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~ 138 (239)
T TIGR01831 73 EHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITLASVS 138 (239)
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEEcchh
Confidence 2335689999998753221 22 3345566766554444432 1222 335677776543
No 388
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.45 E-value=0.016 Score=49.40 Aligned_cols=93 Identities=19% Similarity=0.160 Sum_probs=57.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.+|+.++..+..-|+ +|..+|+.... . . ...+.. + ...++.+.++.||+
T Consensus 36 g~tvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~---~-~--~~~~~~------~-~~~~l~ell~~aDi 94 (178)
T PF02826_consen 36 GKTVGIIG-YGRIGRAVARRLKAFGM-------RVIGYDRSPKP---E-E--GADEFG------V-EYVSLDELLAQADI 94 (178)
T ss_dssp TSEEEEES-TSHHHHHHHHHHHHTT--------EEEEEESSCHH---H-H--HHHHTT------E-EESSHHHHHHH-SE
T ss_pred CCEEEEEE-EcCCcCeEeeeeecCCc-------eeEEecccCCh---h-h--hccccc------c-eeeehhhhcchhhh
Confidence 47999999 79999999999987654 89999987421 1 1 111111 1 22468889999999
Q ss_pred EEEeCCCCC-CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022 85 AVMVGGFPR-KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 85 Vi~~ag~~~-~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP 133 (332)
|++..-... ..+. -|. +.+.+ .++++++|+++--
T Consensus 95 v~~~~plt~~T~~l-------i~~-------~~l~~-mk~ga~lvN~aRG 129 (178)
T PF02826_consen 95 VSLHLPLTPETRGL-------INA-------EFLAK-MKPGAVLVNVARG 129 (178)
T ss_dssp EEE-SSSSTTTTTS-------BSH-------HHHHT-STTTEEEEESSSG
T ss_pred hhhhhcccccccee-------eee-------eeeec-cccceEEEeccch
Confidence 999864332 1121 111 12233 3578889888753
No 389
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.03 Score=57.44 Aligned_cols=117 Identities=17% Similarity=0.118 Sum_probs=64.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhhc--
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEAC-- 79 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~al-- 79 (332)
.+++.|+||+|.+|.+++..|+..|. +|.++++++ +.++....++....... ..++.-..+..+++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 441 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-------TVFLVARNG--EALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKD 441 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-------EEEEEECCH--HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 46899999999999999999998763 789999874 33333333332211000 00111011122222
Q ss_pred -----CCCcEEEEeCCCCCCCC--------CCHHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022 80 -----TGVNIAVMVGGFPRKEG--------MERKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 80 -----~~aDiVi~~ag~~~~~~--------~~r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN 132 (332)
...|++|+.||...... .+....+..|+.. ++.+.+.+++.. .+.+|++|.
T Consensus 442 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~g~iv~isS 509 (657)
T PRK07201 442 ILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR--FGHVVNVSS 509 (657)
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--CCEEEEECC
Confidence 36899999999743211 1122345566554 344455555443 346777764
No 390
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.40 E-value=0.13 Score=45.21 Aligned_cols=118 Identities=16% Similarity=0.180 Sum_probs=60.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-ccceEeeC---------Ch
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-LKGVVATT---------DA 75 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-~~~~~~~~---------~~ 75 (332)
+.+.|+||+|++|+.++..|+..|. ++++..+.. .+.++....++....... ......+. ..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-------~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-------RVAANCGPN-EERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKV 72 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCC-HHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence 3578999999999999999998763 567766521 222222112221110000 00000110 01
Q ss_pred hhhcCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCc
Q 020022 76 VEACTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSI----YKAQASALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP 133 (332)
.+.+...|+||+.+|..... ..+ ....+..|..- .+.+.+.+++.. ...++++|..
T Consensus 73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~iss~ 138 (242)
T TIGR01829 73 EAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG--WGRIINISSV 138 (242)
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CcEEEEEcch
Confidence 12235689999999875321 122 23344566654 334455554443 2456677643
No 391
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.031 Score=51.29 Aligned_cols=38 Identities=34% Similarity=0.304 Sum_probs=31.0
Q ss_pred CCC-CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022 1 MAK-EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (332)
|.. +.+.+.|+||++.+|.+++..|+..|. .+.+.|++
T Consensus 1 m~~l~~k~~lITGas~GIG~aia~~la~~G~-------~vii~~~~ 39 (286)
T PRK07791 1 MGLLDGRVVIVTGAGGGIGRAHALAFAAEGA-------RVVVNDIG 39 (286)
T ss_pred CCccCCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeeCC
Confidence 543 347899999999999999999998763 68888865
No 392
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.39 E-value=0.16 Score=46.13 Aligned_cols=151 Identities=15% Similarity=0.140 Sum_probs=78.9
Q ss_pred CcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcC--CccceEeeCC-----
Q 020022 5 PVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFP--LLKGVVATTD----- 74 (332)
Q Consensus 5 ~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~--~~~~~~~~~~----- 74 (332)
.+.+.|+||++ .+|.+++..|+..|. .|++.++++ +..+ ...++.+. ... ...++....+
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga-------~V~~~~r~~--~~~~-~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~ 76 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGA-------ELAFTYQGE--ALGK-RVKPLAESLGSDFVLPCDVEDIASVDAVF 76 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCC-------EEEEecCch--HHHH-HHHHHHHhcCCceEEeCCCCCHHHHHHHH
Confidence 46788999765 899999999998874 688888763 1111 11222111 000 0001110000
Q ss_pred --hhhhcCCCcEEEEeCCCCCC-----C--CCCHH---HHHHhhHHH----HHHHHHHHHhhcCCCeEEEEecCcccchH
Q 020022 75 --AVEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSI----YKAQASALEQHAAPNCKVLVVANPANTNA 138 (332)
Q Consensus 75 --~~~al~~aDiVi~~ag~~~~-----~--~~~r~---~~~~~n~~i----~~~i~~~i~~~~~~~~~viv~tNP~~~~~ 138 (332)
..+.+...|++|+.||.... + ..+.+ ..+..|+.. .+.+.+.+. +.+.||++|.....
T Consensus 77 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~----~~G~Iv~isS~~~~-- 150 (271)
T PRK06505 77 EALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP----DGGSMLTLTYGGST-- 150 (271)
T ss_pred HHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc----cCceEEEEcCCCcc--
Confidence 11223568999999997532 1 12332 334455543 344444443 22456676643221
Q ss_pred HHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 139 LILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 139 ~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.|....++.++.--..+-+.+|..+. +..|+
T Consensus 151 -------~~~~~~~~Y~asKaAl~~l~r~la~el~--~~gIr 183 (271)
T PRK06505 151 -------RVMPNYNVMGVAKAALEASVRYLAADYG--PQGIR 183 (271)
T ss_pred -------ccCCccchhhhhHHHHHHHHHHHHHHHh--hcCeE
Confidence 0122222456666666677777888764 44555
No 393
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.39 E-value=0.014 Score=55.07 Aligned_cols=64 Identities=13% Similarity=-0.040 Sum_probs=45.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.||+.++..|...|+ +|..||+... .. .+.... .. ..++.+.+++||+
T Consensus 150 gktvgIiG-~G~IG~~vA~~l~~~G~-------~V~~~d~~~~--~~----~~~~~~-------~~-~~~l~ell~~aDi 207 (333)
T PRK13243 150 GKTIGIIG-FGRIGQAVARRAKGFGM-------RILYYSRTRK--PE----AEKELG-------AE-YRPLEELLRESDF 207 (333)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCCCC--hh----hHHHcC-------CE-ecCHHHHHhhCCE
Confidence 37999999 79999999999987654 7899998641 11 111111 11 2357788999999
Q ss_pred EEEeCC
Q 020022 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
|++..-
T Consensus 208 V~l~lP 213 (333)
T PRK13243 208 VSLHVP 213 (333)
T ss_pred EEEeCC
Confidence 999853
No 394
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.37 E-value=0.066 Score=48.19 Aligned_cols=159 Identities=11% Similarity=0.103 Sum_probs=78.0
Q ss_pred CCcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCC-chhhhhhhHHHHhhhhc-CCccceEeeCC-----
Q 020022 4 EPVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAAF-PLLKGVVATTD----- 74 (332)
Q Consensus 4 ~~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-~~~~l~~~~~dl~~~~~-~~~~~~~~~~~----- 74 (332)
..+.+.|+||+ +.+|.+++..|++.|. ++.+.+++. .++.++....++..... ....++....+
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 78 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-------KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACF 78 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-------EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHH
Confidence 34689999976 7999999999998774 688887642 11222222121110000 00001100001
Q ss_pred --hhhhcCCCcEEEEeCCCCCC-----C--CCCHHHH---HHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022 75 --AVEACTGVNIAVMVGGFPRK-----E--GMERKDV---MSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 75 --~~~al~~aDiVi~~ag~~~~-----~--~~~r~~~---~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~ 142 (332)
..+.+...|++|+.+|.... + ..+.+++ +..|......+.+.+..+-.+.+.||++|.-...
T Consensus 79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~------ 152 (257)
T PRK08594 79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE------ 152 (257)
T ss_pred HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc------
Confidence 11223557999999987431 1 1233322 3344443333333322221223567777743221
Q ss_pred HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.|..-.++.++.--..|-+.++..+. +..|+
T Consensus 153 ---~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr 185 (257)
T PRK08594 153 ---RVVQNYNVMGVAKASLEASVKYLANDLG--KDGIR 185 (257)
T ss_pred ---cCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCCE
Confidence 0112112355566655677777777664 34454
No 395
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.34 E-value=0.019 Score=53.34 Aligned_cols=75 Identities=7% Similarity=-0.009 Sum_probs=52.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
...+++|+| +|..|...+..++...-+. +|+++|++. ++.+..+.++.+. ....+....+.++++++||
T Consensus 116 da~~l~iiG-aG~QA~~~~~a~~~v~~i~-----~v~v~~r~~--~~a~~f~~~~~~~---~~~~v~~~~~~~eav~~aD 184 (301)
T PRK06407 116 NVENFTIIG-SGFQAETQLEGMASVYNPK-----RIRVYSRNF--DHARAFAERFSKE---FGVDIRPVDNAEAALRDAD 184 (301)
T ss_pred CCcEEEEEC-CcHHHHHHHHHHHhcCCCC-----EEEEECCCH--HHHHHHHHHHHHh---cCCcEEEeCCHHHHHhcCC
Confidence 457899999 7999987776666532122 899999984 5555555555432 1235666678899999999
Q ss_pred EEEEeC
Q 020022 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+.+-
T Consensus 185 IV~taT 190 (301)
T PRK06407 185 TITSIT 190 (301)
T ss_pred EEEEec
Confidence 998753
No 396
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.33 E-value=0.037 Score=47.03 Aligned_cols=33 Identities=30% Similarity=0.565 Sum_probs=28.9
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
||+|+| +|.+|+.++..|+..|+ + +++|+|.+.
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGV-G-----NLKLVDFDV 33 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC-C-----eEEEEeCCE
Confidence 699999 69999999999999876 3 799999874
No 397
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.33 E-value=0.019 Score=53.60 Aligned_cols=92 Identities=14% Similarity=0.143 Sum_probs=58.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.||+.++..|..-|+ ++..+|... +...+ .... ....++.+.+++||+
T Consensus 136 g~tvgIvG-~G~IG~~vA~~l~afG~-------~V~~~~~~~--~~~~~----~~~~--------~~~~~l~e~l~~aDv 193 (312)
T PRK15469 136 DFTIGILG-AGVLGSKVAQSLQTWGF-------PLRCWSRSR--KSWPG----VQSF--------AGREELSAFLSQTRV 193 (312)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCC--CCCCC----ceee--------cccccHHHHHhcCCE
Confidence 47999999 89999999999987654 789999753 11110 1000 012367899999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
|+++.-.. ..+..++- .+.+.+. +|++++|+++-
T Consensus 194 vv~~lPlt-----------~~T~~li~--~~~l~~m-k~ga~lIN~aR 227 (312)
T PRK15469 194 LINLLPNT-----------PETVGIIN--QQLLEQL-PDGAYLLNLAR 227 (312)
T ss_pred EEECCCCC-----------HHHHHHhH--HHHHhcC-CCCcEEEECCC
Confidence 99985322 11222221 2334444 47888888873
No 398
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.32 E-value=0.0033 Score=56.48 Aligned_cols=120 Identities=16% Similarity=0.232 Sum_probs=70.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhc----ccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCChhhh
Q 020022 6 VRVLVTGAAGQIGYALVPMIARG----VMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDAVEA 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~----~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~~~a 78 (332)
.||.+.| +|..|..++.+|... |+-.++-.-.+.|+|.+. .+.....|+.+...++ ........++.++
T Consensus 26 ~riv~~G-AGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~G---ll~~~r~~l~~~~~~~a~~~~~~~~~~~L~ea 101 (255)
T PF03949_consen 26 QRIVFFG-AGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKG---LLTDDREDLNPHKKPFARKTNPEKDWGSLLEA 101 (255)
T ss_dssp -EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTE---EEBTTTSSHSHHHHHHHBSSSTTT--SSHHHH
T ss_pred cEEEEeC-CChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccc---eEeccCccCChhhhhhhccCcccccccCHHHH
Confidence 5999999 699999999988876 652000001699999863 2221223332222111 1111112578999
Q ss_pred cCCC--cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc---chHHHHHHh
Q 020022 79 CTGV--NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN---TNALILKEF 144 (332)
Q Consensus 79 l~~a--DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~---~~~~~~~~~ 144 (332)
++++ |++|=+.|.+ |. +.+++++.+.+++ ++.+|.-.|||.. +...-+.+.
T Consensus 102 v~~~kPtvLIG~S~~~---g~-----------ft~evv~~Ma~~~-erPIIF~LSNPt~~aE~~peda~~~ 157 (255)
T PF03949_consen 102 VKGAKPTVLIGLSGQG---GA-----------FTEEVVRAMAKHN-ERPIIFPLSNPTPKAECTPEDAYEW 157 (255)
T ss_dssp HHCH--SEEEECSSST---TS-----------S-HHHHHHCHHHS-SSEEEEE-SSSCGGSSS-HHHHHHT
T ss_pred HHhcCCCEEEEecCCC---Cc-----------CCHHHHHHHhccC-CCCEEEECCCCCCcccCCHHHHHhh
Confidence 9999 9998876643 21 2447788888888 4677777899976 333444443
No 399
>PLN02712 arogenate dehydrogenase
Probab=96.32 E-value=0.035 Score=57.07 Aligned_cols=64 Identities=16% Similarity=0.248 Sum_probs=43.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc-CCCc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC-TGVN 83 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al-~~aD 83 (332)
++||+||| .|.||..++..|...|. +|..+|++. ... .+.++ .+...++..+.+ ++||
T Consensus 52 ~~kIgIIG-~G~mG~slA~~L~~~G~-------~V~~~dr~~--~~~--~A~~~---------Gv~~~~d~~e~~~~~aD 110 (667)
T PLN02712 52 QLKIAIIG-FGNYGQFLAKTLISQGH-------TVLAHSRSD--HSL--AARSL---------GVSFFLDPHDLCERHPD 110 (667)
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCC-------EEEEEeCCH--HHH--HHHHc---------CCEEeCCHHHHhhcCCC
Confidence 57999999 79999999999988763 788999863 111 11111 112234555534 5799
Q ss_pred EEEEeC
Q 020022 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+||++.
T Consensus 111 vViLav 116 (667)
T PLN02712 111 VILLCT 116 (667)
T ss_pred EEEEcC
Confidence 999983
No 400
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=96.31 E-value=0.017 Score=52.99 Aligned_cols=82 Identities=21% Similarity=0.237 Sum_probs=54.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH--------Hhhhhc-CCccceEeeCCh
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME--------LVDAAF-PLLKGVVATTDA 75 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d--------l~~~~~-~~~~~~~~~~~~ 75 (332)
++|||-|| +|+||......++. ++-.+++.++|++. .+..+..-| |.+.-. ....++.++++.
T Consensus 1 ~~kiccig-agyvggptcavia~-----kcp~i~vtvvd~s~--~ri~~wnsd~lpiyepgldevv~~crgknlffstdi 72 (481)
T KOG2666|consen 1 MVKICCIG-AGYVGGPTCAVIAL-----KCPDIEVTVVDISV--PRINAWNSDKLPIYEPGLDEVVKQCRGKNLFFSTDI 72 (481)
T ss_pred CceEEEec-CcccCCcchheeee-----cCCceEEEEEecCc--hHhhcccCCCCcccCCCHHHHHHHhcCCceeeecch
Confidence 36999999 69999875544332 23356899999985 333322111 111111 234678889999
Q ss_pred hhhcCCCcEEEEeCCCCCC
Q 020022 76 VEACTGVNIAVMVGGFPRK 94 (332)
Q Consensus 76 ~~al~~aDiVi~~ag~~~~ 94 (332)
+.+++.||+|++....|.+
T Consensus 73 ekai~eadlvfisvntptk 91 (481)
T KOG2666|consen 73 EKAIKEADLVFISVNTPTK 91 (481)
T ss_pred HHHhhhcceEEEEecCCcc
Confidence 9999999999998776654
No 401
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=96.28 E-value=0.02 Score=53.49 Aligned_cols=73 Identities=26% Similarity=0.226 Sum_probs=48.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
...+++|+| +|..+..-+..++...-+. +|+++|+++ ++++..+.++.+ ....+....+.++|+++||
T Consensus 127 ~~~~l~viG-aG~QA~~~~~a~~~~~~i~-----~v~v~~r~~--~~~~~~~~~~~~----~~~~v~~~~~~~~av~~aD 194 (313)
T PF02423_consen 127 DARTLGVIG-AGVQARWHLRALAAVRPIK-----EVRVYSRSP--ERAEAFAARLRD----LGVPVVAVDSAEEAVRGAD 194 (313)
T ss_dssp T--EEEEE---SHHHHHHHHHHHHHS--S-----EEEEE-SSH--HHHHHHHHHHHC----CCTCEEEESSHHHHHTTSS
T ss_pred CCceEEEEC-CCHHHHHHHHHHHHhCCce-----EEEEEccCh--hHHHHHHHhhcc----ccccceeccchhhhcccCC
Confidence 356899999 7999988776665522133 899999984 556555555554 2446667778999999999
Q ss_pred EEEEe
Q 020022 84 IAVMV 88 (332)
Q Consensus 84 iVi~~ 88 (332)
+|+.+
T Consensus 195 ii~ta 199 (313)
T PF02423_consen 195 IIVTA 199 (313)
T ss_dssp EEEE-
T ss_pred EEEEc
Confidence 98865
No 402
>PRK08605 D-lactate dehydrogenase; Validated
Probab=96.28 E-value=0.0097 Score=56.02 Aligned_cols=64 Identities=25% Similarity=0.297 Sum_probs=44.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.+||+|+| .|.+|+.++..|+. + ++ .+|..+|.... .. .... +....++.+++++||+
T Consensus 146 g~~VgIIG-~G~IG~~vA~~L~~-~-~g----~~V~~~d~~~~-~~-------~~~~-------~~~~~~l~ell~~aDv 203 (332)
T PRK08605 146 DLKVAVIG-TGRIGLAVAKIFAK-G-YG----SDVVAYDPFPN-AK-------AATY-------VDYKDTIEEAVEGADI 203 (332)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHh-c-CC----CEEEEECCCcc-Hh-------HHhh-------ccccCCHHHHHHhCCE
Confidence 47999999 79999999999853 2 12 17889997641 10 1111 1123467889999999
Q ss_pred EEEeCC
Q 020022 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
|+++.-
T Consensus 204 Ivl~lP 209 (332)
T PRK08605 204 VTLHMP 209 (332)
T ss_pred EEEeCC
Confidence 999863
No 403
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.26 E-value=0.25 Score=44.88 Aligned_cols=157 Identities=15% Similarity=0.151 Sum_probs=79.8
Q ss_pred CcEEEEEcCC--CchHHHHHHHHHhcccCCCCCceEEEEEeCCCc-hhhhhhhHHHHhhhhcCCccceEeeCC-------
Q 020022 5 PVRVLVTGAA--GQIGYALVPMIARGVMLGTDQPVILHMLDIPPA-AEALNGVKMELVDAAFPLLKGVVATTD------- 74 (332)
Q Consensus 5 ~~kI~IiGa~--G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~-~~~l~~~~~dl~~~~~~~~~~~~~~~~------- 74 (332)
.+++.|+||+ +.+|.+++..|+..|. .|++.++++. .+.++....++... .....++....+
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~-------~V~l~~r~~~~~~~~~~l~~~~~~~-~~~~~Dl~~~~~v~~~~~~ 81 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGA-------ELAFTYQGDALKKRVEPLAAELGAF-VAGHCDVTDEASIDAVFET 81 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCchHHHHHHHHHHHhcCCc-eEEecCCCCHHHHHHHHHH
Confidence 3678999975 6899999999998874 6788776421 11221111111100 000001100001
Q ss_pred hhhhcCCCcEEEEeCCCCCC-----C--CCCH---HHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHHHh
Q 020022 75 AVEACTGVNIAVMVGGFPRK-----E--GMER---KDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEF 144 (332)
Q Consensus 75 ~~~al~~aDiVi~~ag~~~~-----~--~~~r---~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~~~ 144 (332)
..+.+...|++|+.||+... + ..+. ...+..|+...-.+.+.+...-.+++.++++|.....
T Consensus 82 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-------- 153 (272)
T PRK08159 82 LEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE-------- 153 (272)
T ss_pred HHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc--------
Confidence 11223467999999997531 1 1232 3345566644444444433322223566666642210
Q ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 145 APSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 145 ~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
...|....++.++.-...+-+.++..+. +..|+
T Consensus 154 -~~~p~~~~Y~asKaal~~l~~~la~el~--~~gIr 186 (272)
T PRK08159 154 -KVMPHYNVMGVAKAALEASVKYLAVDLG--PKNIR 186 (272)
T ss_pred -cCCCcchhhhhHHHHHHHHHHHHHHHhc--ccCeE
Confidence 1123222456666666677777777765 34555
No 404
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.25 E-value=0.028 Score=52.33 Aligned_cols=119 Identities=11% Similarity=0.021 Sum_probs=64.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcc-cCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC---ccceEeeCCh-----
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL---LKGVVATTDA----- 75 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~---~~~~~~~~~~----- 75 (332)
.+.+.|+||++.+|.+++..|+..| . .|++.++++ +.++....++....... ..++....+.
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 73 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-------HVIMACRDF--LKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQ 73 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-------EEEEEeCCH--HHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHH
Confidence 4579999999999999999999876 3 688888774 33332222222100000 0000000011
Q ss_pred --hhhcCCCcEEEEeCCCCCC----CCCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 76 --VEACTGVNIAVMVGGFPRK----EGMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 76 --~~al~~aDiVi~~ag~~~~----~~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.+.....|++|+.||+... +..+.+ ..+..|. -+++.+.+.+++.....++||++|.
T Consensus 74 ~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS 143 (314)
T TIGR01289 74 QFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGS 143 (314)
T ss_pred HHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEec
Confidence 1113468999999997422 122322 3345555 4466667777654211256777654
No 405
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=96.24 E-value=0.071 Score=49.42 Aligned_cols=107 Identities=20% Similarity=0.124 Sum_probs=63.4
Q ss_pred cEEEEEcCCCc--------------------hHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhh-hhHHHHhhhhcC
Q 020022 6 VRVLVTGAAGQ--------------------IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALN-GVKMELVDAAFP 64 (332)
Q Consensus 6 ~kI~IiGa~G~--------------------vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~-~~~~dl~~~~~~ 64 (332)
|||+|-|| |+ -|+++|..|+..|. +++++|++. +++. .....+.+.
T Consensus 1 ~~~~~~g~-gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh-------eV~V~Drnr--sa~e~e~~e~Laea--- 67 (341)
T TIGR01724 1 MKVSVYGA-GNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH-------DVVLAEPNR--EFMSDDLWKKVEDA--- 67 (341)
T ss_pred CeeEEecC-cchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC-------EEEEEeCCh--hhhhhhhhHHHHHC---
Confidence 58888884 64 37889999988763 799999874 2221 122223332
Q ss_pred CccceEeeCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec-CcccchHHHHHH
Q 020022 65 LLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA-NPANTNALILKE 143 (332)
Q Consensus 65 ~~~~~~~~~~~~~al~~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t-NP~~~~~~~~~~ 143 (332)
.....++..++.++||+||++-. |-+.+++++..+....+++.++|..| -+.+.+.+.+..
T Consensus 68 ---GA~~AaS~aEAAa~ADVVIL~LP---------------d~aaV~eVl~GLaa~L~~GaIVID~STIsP~t~~~~~e~ 129 (341)
T TIGR01724 68 ---GVKVVSDDKEAAKHGEIHVLFTP---------------FGKGTFSIARTIIEHVPENAVICNTCTVSPVVLYYSLEK 129 (341)
T ss_pred ---CCeecCCHHHHHhCCCEEEEecC---------------CHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHH
Confidence 12344567899999999999842 22233333344545555666565553 344455555544
No 406
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.24 E-value=0.011 Score=53.42 Aligned_cols=69 Identities=12% Similarity=0.105 Sum_probs=45.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
|||+||| +|.+|++++..|...+. . ...+.++|+++ ++++ .+.+.. ..+....+..+++++||+|
T Consensus 1 m~IgiIG-~G~mG~aia~~L~~~g~-~---~~~i~v~~r~~--~~~~----~l~~~~----~~~~~~~~~~~~~~~aDvV 65 (258)
T PRK06476 1 MKIGFIG-TGAITEAMVTGLLTSPA-D---VSEIIVSPRNA--QIAA----RLAERF----PKVRIAKDNQAVVDRSDVV 65 (258)
T ss_pred CeEEEEC-cCHHHHHHHHHHHhCCC-C---hheEEEECCCH--HHHH----HHHHHc----CCceEeCCHHHHHHhCCEE
Confidence 4899999 79999999999987653 1 11467888763 3332 122110 0123445666778899999
Q ss_pred EEeC
Q 020022 86 VMVG 89 (332)
Q Consensus 86 i~~a 89 (332)
|++.
T Consensus 66 ilav 69 (258)
T PRK06476 66 FLAV 69 (258)
T ss_pred EEEe
Confidence 9985
No 407
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.24 E-value=0.084 Score=47.58 Aligned_cols=155 Identities=11% Similarity=0.138 Sum_probs=79.4
Q ss_pred CcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh-hcCCccceEeeC--C-----
Q 020022 5 PVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA-AFPLLKGVVATT--D----- 74 (332)
Q Consensus 5 ~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~-~~~~~~~~~~~~--~----- 74 (332)
.+.+.|+||++ .+|.+++..|+..|. .|.+.++++ .+.....++.+. .........++. +
T Consensus 8 ~k~~lITGas~~~GIG~a~a~~la~~G~-------~v~~~~r~~---~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~ 77 (260)
T PRK06603 8 GKKGLITGIANNMSISWAIAQLAKKHGA-------ELWFTYQSE---VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLF 77 (260)
T ss_pred CcEEEEECCCCCcchHHHHHHHHHHcCC-------EEEEEeCch---HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHH
Confidence 35788999875 699999999998764 688888752 111112222211 000000011110 1
Q ss_pred --hhhhcCCCcEEEEeCCCCCC-----C--CCCHH---HHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccchHHHHH
Q 020022 75 --AVEACTGVNIAVMVGGFPRK-----E--GMERK---DVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILK 142 (332)
Q Consensus 75 --~~~al~~aDiVi~~ag~~~~-----~--~~~r~---~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~~~~~~~ 142 (332)
..+.+...|++|..+|.... + ..+.+ ..+..|+...-.+.+.+...-.+.+.||+++.....
T Consensus 78 ~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~------ 151 (260)
T PRK06603 78 DDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE------ 151 (260)
T ss_pred HHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc------
Confidence 11224568999999886421 1 12322 334555544333333322222123567777753321
Q ss_pred HhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 143 EFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 143 ~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.+.|..-.++.++---..|-+.++..+. +..|+
T Consensus 152 ---~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr 184 (260)
T PRK06603 152 ---KVIPNYNVMGVAKAALEASVKYLANDMG--ENNIR 184 (260)
T ss_pred ---cCCCcccchhhHHHHHHHHHHHHHHHhh--hcCeE
Confidence 1122222456666666777778888765 34565
No 408
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.22 E-value=0.013 Score=56.15 Aligned_cols=36 Identities=22% Similarity=0.333 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (332)
+++||+|+||+|.+|..+...|..... .+|+++..+
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~------~el~~l~s~ 72 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPD------FEITVMTAD 72 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCC------CeEEEEECh
Confidence 356999999999999999999887642 278887654
No 409
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.22 E-value=0.026 Score=53.06 Aligned_cols=74 Identities=19% Similarity=0.176 Sum_probs=50.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
.++|+|+| +|..|...+..+.. .+ +. ++.+++++. ++++..+.++++. +...+....+..+++++||
T Consensus 132 ~~~v~IiG-aG~~a~~~~~al~~~~~-~~-----~V~v~~R~~--~~a~~l~~~~~~~---~g~~v~~~~d~~~al~~aD 199 (330)
T PRK08291 132 ASRAAVIG-AGEQARLQLEALTLVRP-IR-----EVRVWARDA--AKAEAYAADLRAE---LGIPVTVARDVHEAVAGAD 199 (330)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCC-CC-----EEEEEcCCH--HHHHHHHHHHhhc---cCceEEEeCCHHHHHccCC
Confidence 46999999 69999887777764 33 22 799999874 5555554444321 1123445667889999999
Q ss_pred EEEEeCC
Q 020022 84 IAVMVGG 90 (332)
Q Consensus 84 iVi~~ag 90 (332)
+||.+..
T Consensus 200 iVi~aT~ 206 (330)
T PRK08291 200 IIVTTTP 206 (330)
T ss_pred EEEEeeC
Confidence 9988743
No 410
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.076 Score=49.29 Aligned_cols=159 Identities=11% Similarity=0.037 Sum_probs=81.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc--------hhhhhhhHHHHhhhhcC---CccceEeeC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--------AEALNGVKMELVDAAFP---LLKGVVATT 73 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~--------~~~l~~~~~dl~~~~~~---~~~~~~~~~ 73 (332)
.+.+.|+||++.+|.+++..|+..|. .|++.+++.. ++.+......+...... ...++....
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~ 80 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAAGA-------TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPE 80 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-------EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 46899999999999999999998764 6888888631 12222222222211100 000110001
Q ss_pred Ch-------hhhcCCCcEEEEeC-CCCC-----CC--CCCHH---HHHHhhH----HHHHHHHHHHHhhcCCCeEEEEec
Q 020022 74 DA-------VEACTGVNIAVMVG-GFPR-----KE--GMERK---DVMSKNV----SIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 74 ~~-------~~al~~aDiVi~~a-g~~~-----~~--~~~r~---~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
+. .+.+...|++|+.+ |... .+ ..+.+ +.+..|+ -..+.+.+.+.+.. .+.||++|
T Consensus 81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~--~g~IV~is 158 (305)
T PRK08303 81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP--GGLVVEIT 158 (305)
T ss_pred HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC--CcEEEEEC
Confidence 11 12234679999998 7421 11 12222 2233343 44556666665432 35677776
Q ss_pred CcccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 132 NPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 132 NP~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
...... . ..+.+..-.++.+..--..|-+.+|..++ +..|+
T Consensus 159 S~~~~~-----~-~~~~~~~~~Y~asKaal~~lt~~La~el~--~~gIr 199 (305)
T PRK08303 159 DGTAEY-----N-ATHYRLSVFYDLAKTSVNRLAFSLAHELA--PHGAT 199 (305)
T ss_pred Cccccc-----c-CcCCCCcchhHHHHHHHHHHHHHHHHHhh--hcCcE
Confidence 532100 0 00111111355566655677777887765 45665
No 411
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.21 E-value=0.012 Score=55.39 Aligned_cols=75 Identities=24% Similarity=0.379 Sum_probs=44.7
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~ 80 (332)
|+ +++||+|+||+|.+|..++..|...+. + ..+++++.-.+ -.|..+.+.. ....+.....++++
T Consensus 1 m~-~~~~IaIvGATG~vG~eLlrlL~~~~h--P--~~~l~~v~s~~----~aG~~l~~~~------~~l~~~~~~~~~~~ 65 (336)
T PRK05671 1 MS-QPLDIAVVGATGTVGEALVQILEERDF--P--VGTLHLLASSE----SAGHSVPFAG------KNLRVREVDSFDFS 65 (336)
T ss_pred CC-CCCEEEEEccCCHHHHHHHHHHhhCCC--C--ceEEEEEECcc----cCCCeeccCC------cceEEeeCChHHhc
Confidence 64 347999999999999999999986431 1 12566664332 1222222211 12333222223468
Q ss_pred CCcEEEEeCC
Q 020022 81 GVNIAVMVGG 90 (332)
Q Consensus 81 ~aDiVi~~ag 90 (332)
++|+|+++.+
T Consensus 66 ~vD~vFla~p 75 (336)
T PRK05671 66 QVQLAFFAAG 75 (336)
T ss_pred CCCEEEEcCC
Confidence 9999999854
No 412
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.18 E-value=0.0059 Score=54.23 Aligned_cols=70 Identities=17% Similarity=0.303 Sum_probs=44.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC----Chhhh-cC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT----DAVEA-CT 80 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~----~~~~a-l~ 80 (332)
|+++|+| +|.+|++++..|...|. +++++|.++ ++++....|-.+. .-+.... -+.+| +.
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~-------~Vv~Id~d~--~~~~~~~~~~~~~-----~~v~gd~t~~~~L~~agi~ 65 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGH-------NVVLIDRDE--ERVEEFLADELDT-----HVVIGDATDEDVLEEAGID 65 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCC-------ceEEEEcCH--HHHHHHhhhhcce-----EEEEecCCCHHHHHhcCCC
Confidence 5899999 69999999999998763 799999984 3333211110011 1111111 23343 67
Q ss_pred CCcEEEEeCC
Q 020022 81 GVNIAVMVGG 90 (332)
Q Consensus 81 ~aDiVi~~ag 90 (332)
++|++|.+-|
T Consensus 66 ~aD~vva~t~ 75 (225)
T COG0569 66 DADAVVAATG 75 (225)
T ss_pred cCCEEEEeeC
Confidence 8999998854
No 413
>PLN03139 formate dehydrogenase; Provisional
Probab=96.16 E-value=0.035 Score=53.25 Aligned_cols=93 Identities=15% Similarity=0.095 Sum_probs=57.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.||+.++..|..-|+ ++..||.... .. ... .+. .+....++.+.+++||+
T Consensus 199 gktVGIVG-~G~IG~~vA~~L~afG~-------~V~~~d~~~~--~~--~~~--~~~------g~~~~~~l~ell~~sDv 258 (386)
T PLN03139 199 GKTVGTVG-AGRIGRLLLQRLKPFNC-------NLLYHDRLKM--DP--ELE--KET------GAKFEEDLDAMLPKCDV 258 (386)
T ss_pred CCEEEEEe-ecHHHHHHHHHHHHCCC-------EEEEECCCCc--ch--hhH--hhc------CceecCCHHHHHhhCCE
Confidence 47999999 79999999999986553 7888997631 11 111 111 11223468888999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
|++..-.. .+...++ | .+.+... +|++++|+++
T Consensus 259 V~l~lPlt----~~T~~li--~-------~~~l~~m-k~ga~lIN~a 291 (386)
T PLN03139 259 VVINTPLT----EKTRGMF--N-------KERIAKM-KKGVLIVNNA 291 (386)
T ss_pred EEEeCCCC----HHHHHHh--C-------HHHHhhC-CCCeEEEECC
Confidence 99985322 1111222 2 1334444 4788888876
No 414
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=96.16 E-value=0.043 Score=48.08 Aligned_cols=90 Identities=18% Similarity=0.263 Sum_probs=60.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
+||+||| .|.+|..+...+..... + .+ -+.+||.++ ++++ .+.... ... ..++..+.+.+.|++
T Consensus 1 l~vgiVG-cGaIG~~l~e~v~~~~~-~--~e-~v~v~D~~~--ek~~----~~~~~~---~~~--~~s~ide~~~~~Dlv 64 (255)
T COG1712 1 LKVGIVG-CGAIGKFLLELVRDGRV-D--FE-LVAVYDRDE--EKAK----ELEASV---GRR--CVSDIDELIAEVDLV 64 (255)
T ss_pred CeEEEEe-ccHHHHHHHHHHhcCCc-c--ee-EEEEecCCH--HHHH----HHHhhc---CCC--ccccHHHHhhcccee
Confidence 5899999 79999999888765421 1 11 478899874 3332 222211 111 125677777999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEE
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVL 128 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~vi 128 (332)
|.+|+ .+.+++++.++-+.+ .|.+|+
T Consensus 65 VEaAS----------------~~Av~e~~~~~L~~g-~d~iV~ 90 (255)
T COG1712 65 VEAAS----------------PEAVREYVPKILKAG-IDVIVM 90 (255)
T ss_pred eeeCC----------------HHHHHHHhHHHHhcC-CCEEEE
Confidence 99975 356889999999886 465443
No 415
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.15 E-value=0.03 Score=52.27 Aligned_cols=73 Identities=19% Similarity=0.191 Sum_probs=49.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a 82 (332)
...+|+|+| +|.+|...+..++. .+. . +|.++++++ ++.+..+.++.+. ..++....+.++++++|
T Consensus 124 ~~~~v~iiG-~G~~a~~~~~al~~~~~~-~-----~V~V~~Rs~--~~a~~~a~~~~~~----g~~~~~~~~~~~av~~a 190 (314)
T PRK06141 124 DASRLLVVG-TGRLASLLALAHASVRPI-K-----QVRVWGRDP--AKAEALAAELRAQ----GFDAEVVTDLEAAVRQA 190 (314)
T ss_pred CCceEEEEC-CcHHHHHHHHHHHhcCCC-C-----EEEEEcCCH--HHHHHHHHHHHhc----CCceEEeCCHHHHHhcC
Confidence 357999999 79999998876554 332 2 799999874 5555444444321 11344556778899999
Q ss_pred cEEEEeC
Q 020022 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+|+.+-
T Consensus 191 DIVi~aT 197 (314)
T PRK06141 191 DIISCAT 197 (314)
T ss_pred CEEEEee
Confidence 9996653
No 416
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=96.15 E-value=0.046 Score=49.04 Aligned_cols=44 Identities=30% Similarity=0.326 Sum_probs=31.9
Q ss_pred EEEEEcCCCchHHHHHHHHHh----cccCCCCCceEEEEEeCCCchhhhhhhHHHHh
Q 020022 7 RVLVTGAAGQIGYALVPMIAR----GVMLGTDQPVILHMLDIPPAAEALNGVKMELV 59 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~----~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~ 59 (332)
.+.|+||++.+|.+++..|+. .|. .|.+.++++ +.++....++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~-------~V~~~~r~~--~~~~~~~~~l~ 49 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS-------VLVLSARND--EALRQLKAEIG 49 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc-------EEEEEEcCH--HHHHHHHHHHH
Confidence 478999999999999999986 332 688998874 44444444443
No 417
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=96.15 E-value=0.18 Score=46.67 Aligned_cols=38 Identities=32% Similarity=0.439 Sum_probs=27.7
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 3 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 3 ~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
|+++||+||| +|++|..++..+....-+ + -..++|+++
T Consensus 2 m~klrVAIIG-tG~IGt~hm~~l~~~~~v----e-lvAVvdid~ 39 (302)
T PRK08300 2 MSKLKVAIIG-SGNIGTDLMIKILRSEHL----E-PGAMVGIDP 39 (302)
T ss_pred CCCCeEEEEc-CcHHHHHHHHHHhcCCCc----E-EEEEEeCCh
Confidence 4568999999 899999988877753211 1 256888875
No 418
>PRK08017 oxidoreductase; Provisional
Probab=96.15 E-value=0.23 Score=44.22 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=29.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
++|.|+||+|++|.+++..|+..|. ++.+++++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-------~v~~~~r~~ 36 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-------RVLAACRKP 36 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-------EEEEEeCCH
Confidence 4799999999999999999998763 688888864
No 419
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=96.15 E-value=0.024 Score=52.18 Aligned_cols=60 Identities=23% Similarity=0.399 Sum_probs=42.8
Q ss_pred EEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEEEEeC
Q 020022 10 VTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVG 89 (332)
Q Consensus 10 IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiVi~~a 89 (332)
||| .|.+|..++..|+..|. ++.++|+++ ++.+ .+... ....+.+..+++++||+||++.
T Consensus 1 ~IG-lG~mG~~mA~~L~~~G~-------~V~v~dr~~--~~~~----~l~~~------g~~~~~s~~~~~~~advVil~v 60 (288)
T TIGR01692 1 FIG-LGNMGGPMAANLLKAGH-------PVRVFDLFP--DAVE----EAVAA------GAQAAASPAEAAEGADRVITML 60 (288)
T ss_pred CCc-ccHhHHHHHHHHHhCCC-------eEEEEeCCH--HHHH----HHHHc------CCeecCCHHHHHhcCCEEEEeC
Confidence 579 79999999999998763 799999874 3332 22221 1223446778899999999985
No 420
>PRK07589 ornithine cyclodeaminase; Validated
Probab=96.13 E-value=0.029 Score=53.02 Aligned_cols=73 Identities=19% Similarity=0.196 Sum_probs=51.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
..+++||| +|..+...+..++.-.-+. +|.++++++ ++.+..+.++.+. ..++....+.++++++||+
T Consensus 129 a~~l~iiG-aG~QA~~~l~a~~~vr~i~-----~V~v~~r~~--~~a~~~~~~~~~~----~~~v~~~~~~~~av~~ADI 196 (346)
T PRK07589 129 SRTMALIG-NGAQSEFQALAFKALLGIE-----EIRLYDIDP--AATAKLARNLAGP----GLRIVACRSVAEAVEGADI 196 (346)
T ss_pred CcEEEEEC-CcHHHHHHHHHHHHhCCce-----EEEEEeCCH--HHHHHHHHHHHhc----CCcEEEeCCHHHHHhcCCE
Confidence 57899999 7999887766655422122 899999984 5555555555431 2245666788999999999
Q ss_pred EEEeC
Q 020022 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
|+.+-
T Consensus 197 IvtaT 201 (346)
T PRK07589 197 ITTVT 201 (346)
T ss_pred EEEec
Confidence 98864
No 421
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.13 E-value=0.021 Score=53.03 Aligned_cols=73 Identities=12% Similarity=0.031 Sum_probs=50.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a 82 (332)
...+|+|+| +|.+|...+..+.. .+. . ++.++|+++ ++++..+..+.+. ...+. ..+.++++.+|
T Consensus 124 ~~~~v~IiG-aG~qa~~~~~al~~~~~~-~-----~v~v~~r~~--~~a~~~a~~~~~~----~~~~~-~~~~~~av~~a 189 (304)
T PRK07340 124 PPGDLLLIG-TGVQARAHLEAFAAGLPV-R-----RVWVRGRTA--ASAAAFCAHARAL----GPTAE-PLDGEAIPEAV 189 (304)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHhCCC-C-----EEEEEcCCH--HHHHHHHHHHHhc----CCeeE-ECCHHHHhhcC
Confidence 357999999 79999998888865 332 2 799999984 5555555444321 11222 35678899999
Q ss_pred cEEEEeCC
Q 020022 83 NIAVMVGG 90 (332)
Q Consensus 83 DiVi~~ag 90 (332)
|+||.+-.
T Consensus 190 DiVitaT~ 197 (304)
T PRK07340 190 DLVVTATT 197 (304)
T ss_pred CEEEEccC
Confidence 99998743
No 422
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.10 E-value=0.02 Score=55.69 Aligned_cols=72 Identities=21% Similarity=0.231 Sum_probs=48.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
..+|+|+| +|.+|..++..|...|.. ++.++|++. +++...+..+.. ......+..+++.++|+
T Consensus 180 ~~~VlViG-aG~iG~~~a~~L~~~G~~------~V~v~~rs~--~ra~~la~~~g~-------~~i~~~~l~~~l~~aDv 243 (417)
T TIGR01035 180 GKKALLIG-AGEMGELVAKHLLRKGVG------KILIANRTY--ERAEDLAKELGG-------EAVKFEDLEEYLAEADI 243 (417)
T ss_pred CCEEEEEC-ChHHHHHHHHHHHHCCCC------EEEEEeCCH--HHHHHHHHHcCC-------eEeeHHHHHHHHhhCCE
Confidence 46999999 699999999999876632 699999874 333322222211 11111356778899999
Q ss_pred EEEeCCCC
Q 020022 85 AVMVGGFP 92 (332)
Q Consensus 85 Vi~~ag~~ 92 (332)
||.+.+.+
T Consensus 244 Vi~aT~s~ 251 (417)
T TIGR01035 244 VISSTGAP 251 (417)
T ss_pred EEECCCCC
Confidence 99986655
No 423
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.09 E-value=0.0037 Score=59.97 Aligned_cols=74 Identities=23% Similarity=0.350 Sum_probs=44.0
Q ss_pred EEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEee----CChhhhcCCCc
Q 020022 8 VLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVAT----TDAVEACTGVN 83 (332)
Q Consensus 8 I~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~----~~~~~al~~aD 83 (332)
|.|+|| |.+|+.++..|++..-.. ++++.|++. ++++.....+.. ......... ..+.+.++++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~-----~v~va~r~~--~~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~~~~~d 69 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFE-----EVTVADRNP--EKAERLAEKLLG---DRVEAVQVDVNDPESLAELLRGCD 69 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE------EEEEEESSH--HHHHHHHT--TT---TTEEEEE--TTTHHHHHHHHTTSS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCC-----cEEEEECCH--HHHHHHHhhccc---cceeEEEEecCCHHHHHHHHhcCC
Confidence 789996 999999999999865322 799999984 444433222210 111111111 12566789999
Q ss_pred EEEEeCCCC
Q 020022 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.++|..
T Consensus 70 vVin~~gp~ 78 (386)
T PF03435_consen 70 VVINCAGPF 78 (386)
T ss_dssp EEEE-SSGG
T ss_pred EEEECCccc
Confidence 999998744
No 424
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.06 E-value=0.029 Score=52.63 Aligned_cols=74 Identities=14% Similarity=0.092 Sum_probs=49.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
..+++|+| +|.+|...+..++...-+. +|.++|+++ ++.+....++.+. +..++....+.+++++++|+
T Consensus 127 ~~~v~iiG-aG~~a~~~~~al~~~~~~~-----~v~v~~r~~--~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~aDi 195 (325)
T PRK08618 127 AKTLCLIG-TGGQAKGQLEAVLAVRDIE-----RVRVYSRTF--EKAYAFAQEIQSK---FNTEIYVVNSADEAIEEADI 195 (325)
T ss_pred CcEEEEEC-CcHHHHHHHHHHHhcCCcc-----EEEEECCCH--HHHHHHHHHHHHh---cCCcEEEeCCHHHHHhcCCE
Confidence 57899999 7999987776665321122 799999984 5555444444321 11234455677889999999
Q ss_pred EEEeC
Q 020022 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||.+-
T Consensus 196 Vi~aT 200 (325)
T PRK08618 196 IVTVT 200 (325)
T ss_pred EEEcc
Confidence 98874
No 425
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.06 E-value=0.32 Score=43.75 Aligned_cols=156 Identities=14% Similarity=0.186 Sum_probs=77.9
Q ss_pred CCC-CCcEEEEEcC--CCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhh--h-cCCccceEeeCC
Q 020022 1 MAK-EPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDA--A-FPLLKGVVATTD 74 (332)
Q Consensus 1 m~~-~~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~--~-~~~~~~~~~~~~ 74 (332)
|.. +.+.+.|+|| ++.+|.+++..|+..|. .+.+.++++ +......++... . .....++.-..+
T Consensus 1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~-------~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 70 (261)
T PRK08690 1 MGFLQGKKILITGMISERSIAYGIAKACREQGA-------ELAFTYVVD---KLEERVRKMAAELDSELVFRCDVASDDE 70 (261)
T ss_pred CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCC-------EEEEEcCcH---HHHHHHHHHHhccCCceEEECCCCCHHH
Confidence 544 3468999996 56899999999998774 677776542 111112222111 0 000001111111
Q ss_pred -------hhhhcCCCcEEEEeCCCCCCC--------CCCHHHH---HHhhHHH----HHHHHHHHHhhcCCCeEEEEecC
Q 020022 75 -------AVEACTGVNIAVMVGGFPRKE--------GMERKDV---MSKNVSI----YKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 75 -------~~~al~~aDiVi~~ag~~~~~--------~~~r~~~---~~~n~~i----~~~i~~~i~~~~~~~~~viv~tN 132 (332)
..+.+...|++|+.||..... ..+.+++ +..|+.. .+.+.+.+++. + +.|+++|.
T Consensus 71 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~-g~Iv~iss 147 (261)
T PRK08690 71 INQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--N-SAIVALSY 147 (261)
T ss_pred HHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--C-cEEEEEcc
Confidence 112234689999999985321 1222222 3445432 34444444322 2 45667764
Q ss_pred cccchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 133 PANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 133 P~~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.... .+.|..-.++.++---..+-+.+|..+. +..|+
T Consensus 148 ~~~~---------~~~~~~~~Y~asKaal~~l~~~la~e~~--~~gIr 184 (261)
T PRK08690 148 LGAV---------RAIPNYNVMGMAKASLEAGIRFTAACLG--KEGIR 184 (261)
T ss_pred cccc---------cCCCCcccchhHHHHHHHHHHHHHHHhh--hcCeE
Confidence 3321 1122222455555555566677776654 44565
No 426
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=96.04 E-value=0.019 Score=51.60 Aligned_cols=120 Identities=14% Similarity=0.132 Sum_probs=71.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccC---CCCC-ceEEEEEeCCCchhhhhhhHHHHhhhhcC---CccceEeeCChhhh
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVML---GTDQ-PVILHMLDIPPAAEALNGVKMELVDAAFP---LLKGVVATTDAVEA 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~---~~~~-~~ei~L~D~~~~~~~l~~~~~dl~~~~~~---~~~~~~~~~~~~~a 78 (332)
.||.|.| +|..|..++.+|...+.- +.++ .-.+.++|... .+....-|+.....+ +.+.-....++.++
T Consensus 26 ~riv~~G-AGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~G---ll~~~r~~l~~~~~~~~~~~~~~~~~~~L~ea 101 (254)
T cd00762 26 HKVLFNG-AGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKG---LLVKNRKETCPNEYHLARFANPERESGDLEDA 101 (254)
T ss_pred cEEEEEC-cCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCC---eEeCCCCccCHHHHHHHHHcCcccccCCHHHH
Confidence 6999999 699999999988775432 1000 01589999763 121111111111001 11111123579999
Q ss_pred cC--CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCccc---chHHHHHHh
Q 020022 79 CT--GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPAN---TNALILKEF 144 (332)
Q Consensus 79 l~--~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~---~~~~~~~~~ 144 (332)
++ ++|++|=+.+.+ | -+.+++.+.+.++| ++.+|.-.|||.. +...-+.+.
T Consensus 102 v~~~kptvlIG~S~~~---g-----------~ft~evv~~Ma~~~-~~PIIFaLSNPt~~aE~tpe~a~~~ 157 (254)
T cd00762 102 VEAAKPDFLIGVSRVG---G-----------AFTPEVIRAXAEIN-ERPVIFALSNPTSKAECTAEEAYTA 157 (254)
T ss_pred HHhhCCCEEEEeCCCC---C-----------CCCHHHHHHHhhcC-CCCEEEECCCcCCccccCHHHHHhh
Confidence 99 999998776544 2 12347778888888 4567777899974 444555554
No 427
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.04 E-value=0.045 Score=47.72 Aligned_cols=71 Identities=8% Similarity=0.045 Sum_probs=43.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
..+||.|+| +|.+|...+..|+..|. +|++++.+.. + ...++.+.. .-......-.++.+.++|
T Consensus 9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga-------~V~VIs~~~~----~-~l~~l~~~~---~i~~~~~~~~~~~l~~ad 72 (202)
T PRK06718 9 SNKRVVIVG-GGKVAGRRAITLLKYGA-------HIVVISPELT----E-NLVKLVEEG---KIRWKQKEFEPSDIVDAF 72 (202)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCC-------eEEEEcCCCC----H-HHHHHHhCC---CEEEEecCCChhhcCCce
Confidence 357999999 69999999999988762 6888875421 1 112222111 001111122345689999
Q ss_pred EEEEeCC
Q 020022 84 IAVMVGG 90 (332)
Q Consensus 84 iVi~~ag 90 (332)
+||.+-+
T Consensus 73 lViaaT~ 79 (202)
T PRK06718 73 LVIAATN 79 (202)
T ss_pred EEEEcCC
Confidence 9888743
No 428
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.022 Score=50.01 Aligned_cols=112 Identities=15% Similarity=0.099 Sum_probs=60.2
Q ss_pred EEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhh-cC-CccceEeeCChhhhc---CCCc
Q 020022 9 LVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAA-FP-LLKGVVATTDAVEAC---TGVN 83 (332)
Q Consensus 9 ~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~-~~-~~~~~~~~~~~~~al---~~aD 83 (332)
.|+||+|++|+.++..|++.|. ++.+.++++ +.+.....++.... .. ...++....+..+++ ...|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~-------~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id 71 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA-------RVTIASRSR--DRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFD 71 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence 3899999999999999998764 789999874 33332222232100 00 000111111122223 3479
Q ss_pred EEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 84 IAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 84 iVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
++|+.+|..... ..+ ....+..|+.....+.+ +.... +...+++++
T Consensus 72 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~-~~~~~-~~g~iv~~s 123 (230)
T PRK07041 72 HVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR-AARIA-PGGSLTFVS 123 (230)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh-hhhhc-CCeEEEEEC
Confidence 999999874321 112 23445666665555555 22332 335566554
No 429
>PLN02928 oxidoreductase family protein
Probab=96.02 E-value=0.022 Score=53.91 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=58.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhc-CCccceEeeCChhhhcCCCc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAF-PLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~-~~~~~~~~~~~~~~al~~aD 83 (332)
.++|+|+| .|.||+.++..|..-|+ +|..+|+....+.. ....+..... ..........++.+.++.||
T Consensus 159 gktvGIiG-~G~IG~~vA~~l~afG~-------~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~~aD 228 (347)
T PLN02928 159 GKTVFILG-YGAIGIELAKRLRPFGV-------KLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAGEAD 228 (347)
T ss_pred CCEEEEEC-CCHHHHHHHHHHhhCCC-------EEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHhhCC
Confidence 37999999 79999999999987654 78999975311100 0000000000 00000001246889999999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
+|++..-... .+ ..++ | .+.+.+. +|++++|+++-
T Consensus 229 iVvl~lPlt~---~T-~~li--~-------~~~l~~M-k~ga~lINvaR 263 (347)
T PLN02928 229 IVVLCCTLTK---ET-AGIV--N-------DEFLSSM-KKGALLVNIAR 263 (347)
T ss_pred EEEECCCCCh---Hh-hccc--C-------HHHHhcC-CCCeEEEECCC
Confidence 9999864321 11 1111 1 2333444 47888888874
No 430
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.00 E-value=0.16 Score=44.02 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=73.6
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEe-------eC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVA-------TT 73 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~-------~~ 73 (332)
|+.....|.|+||+..+|..+|..+.+.|- ++....+++ ++|........... .....+.. ..
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN-------~VIi~gR~e--~~L~e~~~~~p~~~-t~v~Dv~d~~~~~~lve 70 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGN-------TVIICGRNE--ERLAEAKAENPEIH-TEVCDVADRDSRRELVE 70 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCC-------EEEEecCcH--HHHHHHHhcCcchh-eeeecccchhhHHHHHH
Confidence 666677999999999999999999998753 788888874 55542211111100 00000000 01
Q ss_pred ChhhhcCCCcEEEEeCCCCCCCCCC-----H---HHHH----HhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 74 DAVEACTGVNIAVMVGGFPRKEGME-----R---KDVM----SKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 74 ~~~~al~~aDiVi~~ag~~~~~~~~-----r---~~~~----~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
-..+...+-+++|..||+.+..+.+ . ++.. ..-+.....+.+.+.+. |.+.||++|.
T Consensus 71 wLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q--~~a~IInVSS 139 (245)
T COG3967 71 WLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ--PEATIINVSS 139 (245)
T ss_pred HHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC--CCceEEEecc
Confidence 1234456789999999998755422 1 1122 23346677778888764 4688899884
No 431
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.99 E-value=0.034 Score=48.51 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=30.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (332)
..||+|+| .|.+|+.++..|+..|+ + +++|+|.+
T Consensus 21 ~~~VlviG-~GglGs~ia~~La~~Gv-~-----~i~lvD~d 54 (202)
T TIGR02356 21 NSHVLIIG-AGGLGSPAALYLAGAGV-G-----TIVIVDDD 54 (202)
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEecCC
Confidence 46999999 79999999999999885 4 79999976
No 432
>PRK06823 ornithine cyclodeaminase; Validated
Probab=95.99 E-value=0.043 Score=51.24 Aligned_cols=74 Identities=16% Similarity=0.062 Sum_probs=51.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
...+++|+| +|..+...+..++...-+. +|+++|+++ ++.+..+..+.+. ..++....+.++++++||
T Consensus 127 d~~~l~iiG-~G~qA~~~~~a~~~v~~i~-----~v~v~~r~~--~~a~~~~~~~~~~----~~~v~~~~~~~~av~~AD 194 (315)
T PRK06823 127 HVSAIGIVG-TGIQARMQLMYLKNVTDCR-----QLWVWGRSE--TALEEYRQYAQAL----GFAVNTTLDAAEVAHAAN 194 (315)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhcCCCC-----EEEEECCCH--HHHHHHHHHHHhc----CCcEEEECCHHHHhcCCC
Confidence 357999999 7999988777766532122 899999984 5554444333321 234555677889999999
Q ss_pred EEEEeC
Q 020022 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+.+-
T Consensus 195 IV~taT 200 (315)
T PRK06823 195 LIVTTT 200 (315)
T ss_pred EEEEec
Confidence 998764
No 433
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.97 E-value=0.15 Score=45.79 Aligned_cols=36 Identities=22% Similarity=0.235 Sum_probs=27.6
Q ss_pred CCC-CCcEEEEEcCCC--chHHHHHHHHHhcccCCCCCceEEEEEe
Q 020022 1 MAK-EPVRVLVTGAAG--QIGYALVPMIARGVMLGTDQPVILHMLD 43 (332)
Q Consensus 1 m~~-~~~kI~IiGa~G--~vG~~la~~l~~~~~~~~~~~~ei~L~D 43 (332)
|.. +.++|.|+||+| .+|.+++..|+..|. ++.+.+
T Consensus 1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~-------~vi~~~ 39 (256)
T PRK12859 1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGA-------DIFFTY 39 (256)
T ss_pred CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCC-------eEEEEe
Confidence 543 347899999874 799999999998763 566664
No 434
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.96 E-value=0.073 Score=46.77 Aligned_cols=34 Identities=29% Similarity=0.527 Sum_probs=30.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (332)
..||+|+| +|.+|+.++..|+..|+ + +++|+|.+
T Consensus 28 ~~~V~ViG-~GglGs~ia~~La~~Gv-g-----~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAG-AGGLGSNIAVALARSGV-G-----NLKLVDFD 61 (212)
T ss_pred CCCEEEEC-cCHHHHHHHHHHHHcCC-C-----eEEEEeCC
Confidence 46899999 69999999999999886 3 79999987
No 435
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.95 E-value=0.12 Score=46.52 Aligned_cols=157 Identities=17% Similarity=0.216 Sum_probs=77.5
Q ss_pred CCC-CCcEEEEEcC--CCchHHHHHHHHHhcccCCCCCceEEEEEeCCC-chhhhhhhHHHHhhhhcCCccceEeeCCh-
Q 020022 1 MAK-EPVRVLVTGA--AGQIGYALVPMIARGVMLGTDQPVILHMLDIPP-AAEALNGVKMELVDAAFPLLKGVVATTDA- 75 (332)
Q Consensus 1 m~~-~~~kI~IiGa--~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~-~~~~l~~~~~dl~~~~~~~~~~~~~~~~~- 75 (332)
|+. ..+++.|+|| ++.+|.+++..|+..|. ++.+.++.. +.+.++....++... .....++....+.
T Consensus 1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~-------~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~ 72 (260)
T PRK06997 1 MGFLAGKRILITGLLSNRSIAYGIAKACKREGA-------ELAFTYVGDRFKDRITEFAAEFGSD-LVFPCDVASDEQID 72 (260)
T ss_pred CCccCCcEEEEeCCCCCCcHHHHHHHHHHHCCC-------eEEEEccchHHHHHHHHHHHhcCCc-ceeeccCCCHHHHH
Confidence 443 3467999996 46899999999998774 677776431 112222111111100 0000011100111
Q ss_pred ------hhhcCCCcEEEEeCCCCCCC--------CCCHH---HHHHhhHH----HHHHHHHHHHhhcCCCeEEEEecCcc
Q 020022 76 ------VEACTGVNIAVMVGGFPRKE--------GMERK---DVMSKNVS----IYKAQASALEQHAAPNCKVLVVANPA 134 (332)
Q Consensus 76 ------~~al~~aDiVi~~ag~~~~~--------~~~r~---~~~~~n~~----i~~~i~~~i~~~~~~~~~viv~tNP~ 134 (332)
.+.+...|++|+.||..... ..+.+ ..+..|+. ..+.+.+.+. +.+.++++|.-.
T Consensus 73 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~----~~g~Ii~iss~~ 148 (260)
T PRK06997 73 ALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS----DDASLLTLSYLG 148 (260)
T ss_pred HHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC----CCceEEEEeccc
Confidence 12235689999999975321 12322 23445554 3444444442 234566666422
Q ss_pred cchHHHHHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 135 NTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
.. .+.|..-.++.++---..+-+.+|..+. +..|+
T Consensus 149 ~~---------~~~~~~~~Y~asKaal~~l~~~la~el~--~~gIr 183 (260)
T PRK06997 149 AE---------RVVPNYNTMGLAKASLEASVRYLAVSLG--PKGIR 183 (260)
T ss_pred cc---------cCCCCcchHHHHHHHHHHHHHHHHHHhc--ccCeE
Confidence 11 1112112345555555667777777764 34565
No 436
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.94 E-value=0.05 Score=51.38 Aligned_cols=35 Identities=31% Similarity=0.474 Sum_probs=30.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
..||+|+| +|.+|+.++..|+..|+ + +|.|+|.+.
T Consensus 24 ~~~VlVvG-~GglGs~va~~La~aGv-g-----~i~lvD~D~ 58 (339)
T PRK07688 24 EKHVLIIG-AGALGTANAEMLVRAGV-G-----KVTIVDRDY 58 (339)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCC-C-----eEEEEeCCc
Confidence 46999999 69999999999999886 4 799999863
No 437
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=95.94 E-value=0.026 Score=51.15 Aligned_cols=95 Identities=20% Similarity=0.245 Sum_probs=60.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
++||++|| +|+||++++..|+..+... +-+|...|+++ +++. ++... ++. . .+++..++...+|+
T Consensus 1 ~~~IgfIG-~G~Mg~Ai~~gl~~~g~~~---~~~I~v~~~~~--e~~~----~l~~~-~g~--~--~~~~~~~~~~~adv 65 (266)
T COG0345 1 MMKIGFIG-AGNMGEAILSGLLKSGALP---PEEIIVTNRSE--EKRA----ALAAE-YGV--V--TTTDNQEAVEEADV 65 (266)
T ss_pred CceEEEEc-cCHHHHHHHHHHHhcCCCC---cceEEEeCCCH--HHHH----HHHHH-cCC--c--ccCcHHHHHhhCCE
Confidence 46899999 6999999999999887332 22688888774 3322 22221 111 1 15566788899999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
||++. || ..+.++...++.. .++..||-+.
T Consensus 66 v~Lav----KP------------q~~~~vl~~l~~~-~~~~lvISia 95 (266)
T COG0345 66 VFLAV----KP------------QDLEEVLSKLKPL-TKDKLVISIA 95 (266)
T ss_pred EEEEe----Ch------------HhHHHHHHHhhcc-cCCCEEEEEe
Confidence 99984 33 2244666666652 3454444443
No 438
>PLN02712 arogenate dehydrogenase
Probab=95.93 E-value=0.085 Score=54.32 Aligned_cols=65 Identities=14% Similarity=0.223 Sum_probs=44.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC-CC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT-GV 82 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~-~a 82 (332)
+++||+||| .|.||..++..|...|. +|..+|++. . .+ .+.++ . +...++..+.+. ++
T Consensus 368 ~~~kIgIIG-lG~mG~slA~~L~~~G~-------~V~~~dr~~--~-~~-~a~~~--G-------v~~~~~~~el~~~~a 426 (667)
T PLN02712 368 SKLKIAIVG-FGNFGQFLAKTMVKQGH-------TVLAYSRSD--Y-SD-EAQKL--G-------VSYFSDADDLCEEHP 426 (667)
T ss_pred CCCEEEEEe-cCHHHHHHHHHHHHCcC-------EEEEEECCh--H-HH-HHHHc--C-------CeEeCCHHHHHhcCC
Confidence 458999999 79999999999987652 789999873 1 11 11111 1 123345556554 58
Q ss_pred cEEEEeC
Q 020022 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+||++.
T Consensus 427 DvVILav 433 (667)
T PLN02712 427 EVILLCT 433 (667)
T ss_pred CEEEECC
Confidence 9999984
No 439
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.92 E-value=0.026 Score=53.47 Aligned_cols=35 Identities=23% Similarity=0.341 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDI 44 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~ 44 (332)
+++||+|+||+|++|+.++..|...+. .+++++..
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~------~el~~~~~ 36 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPW------FEVTALAA 36 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEEc
Confidence 468999999999999999998886432 26777743
No 440
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.91 E-value=0.034 Score=51.44 Aligned_cols=67 Identities=16% Similarity=0.127 Sum_probs=45.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
..||+|+| .|.+|..++..|...|. ++..+|+++ +..+ .+.++ .. ......+..+.++++|+
T Consensus 152 g~kvlViG-~G~iG~~~a~~L~~~Ga-------~V~v~~r~~--~~~~-~~~~~---G~----~~~~~~~l~~~l~~aDi 213 (296)
T PRK08306 152 GSNVLVLG-FGRTGMTLARTLKALGA-------NVTVGARKS--AHLA-RITEM---GL----SPFHLSELAEEVGKIDI 213 (296)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHCCC-------EEEEEECCH--HHHH-HHHHc---CC----eeecHHHHHHHhCCCCE
Confidence 57999999 69999999999987663 799999874 2211 11111 10 11111346678899999
Q ss_pred EEEeC
Q 020022 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||.+.
T Consensus 214 VI~t~ 218 (296)
T PRK08306 214 IFNTI 218 (296)
T ss_pred EEECC
Confidence 99985
No 441
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.91 E-value=0.041 Score=51.64 Aligned_cols=73 Identities=19% Similarity=0.181 Sum_probs=50.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHh-cccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIAR-GVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~-~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
..+++|+| +|..|...+..|+. .++ . ++.+++++. ++++..+.++.+. ...++....+.++++++||
T Consensus 129 ~~~v~iiG-aG~qA~~~~~al~~~~~i-~-----~v~V~~R~~--~~a~~~a~~~~~~---~g~~v~~~~~~~~av~~aD 196 (326)
T TIGR02992 129 SSVVAIFG-AGMQARLQLEALTLVRDI-R-----SARIWARDS--AKAEALALQLSSL---LGIDVTAATDPRAAMSGAD 196 (326)
T ss_pred CcEEEEEC-CCHHHHHHHHHHHHhCCc-c-----EEEEECCCH--HHHHHHHHHHHhh---cCceEEEeCCHHHHhccCC
Confidence 46899999 69999888888764 332 2 799999984 5555554444321 1123444567888999999
Q ss_pred EEEEeC
Q 020022 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+||.+-
T Consensus 197 iVvtaT 202 (326)
T TIGR02992 197 IIVTTT 202 (326)
T ss_pred EEEEec
Confidence 999874
No 442
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=95.91 E-value=0.067 Score=50.74 Aligned_cols=72 Identities=13% Similarity=0.143 Sum_probs=44.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeC-ChhhhcCCCcE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATT-DAVEACTGVNI 84 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~-~~~~al~~aDi 84 (332)
+||+|+||+|.||+.+...|....-|. ..+++++.... ..+....+.. ....+.. +..++++++|+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp---~~~~~~~ss~~----s~g~~~~f~~------~~~~v~~~~~~~~~~~vDi 67 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFD---AIRPVFFSTSQ----LGQAAPSFGG------TTGTLQDAFDIDALKALDI 67 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCc---cccEEEEEchh----hCCCcCCCCC------CcceEEcCcccccccCCCE
Confidence 489999999999999999888443332 12678886532 2222222211 1222222 22247899999
Q ss_pred EEEeCC
Q 020022 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
+++++|
T Consensus 68 vffa~g 73 (366)
T TIGR01745 68 IITCQG 73 (366)
T ss_pred EEEcCC
Confidence 999876
No 443
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=95.89 E-value=0.033 Score=51.31 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=45.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.+||+|+| .|.+|..++..|...|. +|.++|+++ +.+. . ...... ..+ ...++.+.++++|+
T Consensus 151 gk~v~IiG-~G~iG~avA~~L~~~G~-------~V~v~~R~~--~~~~-~---~~~~g~---~~~-~~~~l~~~l~~aDi 212 (287)
T TIGR02853 151 GSNVMVLG-FGRTGMTIARTFSALGA-------RVFVGARSS--ADLA-R---ITEMGL---IPF-PLNKLEEKVAEIDI 212 (287)
T ss_pred CCEEEEEc-ChHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHH-H---HHHCCC---eee-cHHHHHHHhccCCE
Confidence 46999999 69999999999987663 799999874 2221 1 111100 011 11245677899999
Q ss_pred EEEeC
Q 020022 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
||.+.
T Consensus 213 Vint~ 217 (287)
T TIGR02853 213 VINTI 217 (287)
T ss_pred EEECC
Confidence 99985
No 444
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.84 E-value=0.075 Score=50.16 Aligned_cols=35 Identities=31% Similarity=0.431 Sum_probs=30.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
..||+|+| +|.+|+.++..|+..|+ + +|+|+|.+.
T Consensus 24 ~~~VlIiG-~GglGs~va~~La~aGv-g-----~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVG-AGALGAANAEALVRAGI-G-----KLTIADRDY 58 (338)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCC-C-----EEEEEcCCc
Confidence 46899999 69999999999999885 4 799999874
No 445
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.82 E-value=0.027 Score=51.04 Aligned_cols=67 Identities=22% Similarity=0.331 Sum_probs=42.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
++||+|+|++|.||+.++..+...+- .+ +.++|.++ +..... .. ..+..+++..+.++++|
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~------~elvav~d~~~--~~~~~~----~~------~~i~~~~dl~~ll~~~D 62 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAED------LELVAAVDRPG--SPLVGQ----GA------LGVAITDDLEAVLADAD 62 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCC--cccccc----CC------CCccccCCHHHhccCCC
Confidence 46999999669999999987765321 13 45588764 222211 11 12334567777778899
Q ss_pred EEEEeC
Q 020022 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+||...
T Consensus 63 vVid~t 68 (257)
T PRK00048 63 VLIDFT 68 (257)
T ss_pred EEEECC
Confidence 998664
No 446
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=95.79 E-value=0.054 Score=56.58 Aligned_cols=94 Identities=19% Similarity=0.207 Sum_probs=57.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
.||+||| .|.+|..++..|...|... +|..+|+++ ++++ .+.++ .. .....++..++++++|+|
T Consensus 4 ~~I~IIG-~G~mG~ala~~l~~~G~~~-----~V~~~d~~~--~~~~-~a~~~--g~-----~~~~~~~~~~~~~~aDvV 67 (735)
T PRK14806 4 GRVVVIG-LGLIGGSFAKALRERGLAR-----EVVAVDRRA--KSLE-LAVSL--GV-----IDRGEEDLAEAVSGADVI 67 (735)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCCCC-----EEEEEECCh--hHHH-HHHHC--CC-----CCcccCCHHHHhcCCCEE
Confidence 6899999 7999999999998876311 689999874 3322 11111 11 001234566778999999
Q ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 86 VMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 86 i~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
|++... ..+.++.+.+..+.+++.+|+.++
T Consensus 68 ilavp~----------------~~~~~vl~~l~~~~~~~~ii~d~~ 97 (735)
T PRK14806 68 VLAVPV----------------LAMEKVLADLKPLLSEHAIVTDVG 97 (735)
T ss_pred EECCCH----------------HHHHHHHHHHHHhcCCCcEEEEcC
Confidence 998531 123455555555544555444443
No 447
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.78 E-value=0.093 Score=51.35 Aligned_cols=104 Identities=22% Similarity=0.215 Sum_probs=60.7
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcC
Q 020022 1 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACT 80 (332)
Q Consensus 1 m~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~ 80 (332)
|.++.++|.|+| +|.+|..++..|+..|. +|+++|.+.. +.+.....++... ..++.......+...
T Consensus 1 ~~~~~k~v~iiG-~g~~G~~~A~~l~~~G~-------~V~~~d~~~~-~~~~~~~~~l~~~----~~~~~~~~~~~~~~~ 67 (450)
T PRK14106 1 MELKGKKVLVVG-AGVSGLALAKFLKKLGA-------KVILTDEKEE-DQLKEALEELGEL----GIELVLGEYPEEFLE 67 (450)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCch-HHHHHHHHHHHhc----CCEEEeCCcchhHhh
Confidence 545568999999 58899999999998874 7999998742 2222111222211 111211111224457
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHH
Q 020022 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALE 118 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~ 118 (332)
++|+||.++|.+... ......-..++++++......+
T Consensus 68 ~~d~vv~~~g~~~~~-~~~~~a~~~~i~~~~~~~~~~~ 104 (450)
T PRK14106 68 GVDLVVVSPGVPLDS-PPVVQAHKKGIEVIGEVELAYR 104 (450)
T ss_pred cCCEEEECCCCCCCC-HHHHHHHHCCCcEEeHHHHHHh
Confidence 899999999875321 1111222456666666555444
No 448
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=95.77 E-value=0.1 Score=43.01 Aligned_cols=117 Identities=15% Similarity=0.087 Sum_probs=62.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhH---HHHhhhhcC---CccceEeeCChhhh-
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVK---MELVDAAFP---LLKGVVATTDAVEA- 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~---~dl~~~~~~---~~~~~~~~~~~~~a- 78 (332)
.++.|+||+|.+|.+++..|+..+.. .+.+.++++. ...... .++...... ...++.-..+..+.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~------~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 72 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGAR------HLVLLSRSGP--DAPGAAELLAELEALGAEVTVVACDVADRAALAAAL 72 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCC------eEEEEeCCCC--CCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 36899999999999999999876531 4666666531 111111 122111100 00000000011111
Q ss_pred ------cCCCcEEEEeCCCCCCC---CCC---HHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 79 ------CTGVNIAVMVGGFPRKE---GME---RKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 79 ------l~~aDiVi~~ag~~~~~---~~~---r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
....|.||+.+|..... ..+ ....+..|+.....+.+.+.+.. + .+++++|.
T Consensus 73 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~ii~~ss 136 (180)
T smart00822 73 AAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-L-DFFVLFSS 136 (180)
T ss_pred HHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-c-ceEEEEcc
Confidence 23359999999864321 112 23446778877788888776543 3 45666654
No 449
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.75 E-value=0.024 Score=53.39 Aligned_cols=72 Identities=21% Similarity=0.330 Sum_probs=43.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
++||+|+||+|.+|..++..|...+. + ..+++.+-.+.. .+...++.. ..+.+......+++++|+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~h--p--~~~l~~l~s~~~----~g~~l~~~g------~~i~v~d~~~~~~~~vDv 66 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNF--P--VDKLRLLASARS----AGKELSFKG------KELKVEDLTTFDFSGVDI 66 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC--C--cceEEEEEcccc----CCCeeeeCC------ceeEEeeCCHHHHcCCCE
Confidence 36999999999999999999987432 1 125666644321 222222211 123332222345689999
Q ss_pred EEEeCC
Q 020022 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
||++.|
T Consensus 67 Vf~A~g 72 (334)
T PRK14874 67 ALFSAG 72 (334)
T ss_pred EEECCC
Confidence 999865
No 450
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.74 E-value=0.048 Score=53.11 Aligned_cols=105 Identities=17% Similarity=0.212 Sum_probs=62.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
..++|+|+| +|.+|..++..|...|. . ++.++|++. +++...+.++. ..+....+..+++.++|
T Consensus 181 ~~~~vlViG-aG~iG~~~a~~L~~~G~-~-----~V~v~~r~~--~ra~~la~~~g-------~~~~~~~~~~~~l~~aD 244 (423)
T PRK00045 181 SGKKVLVIG-AGEMGELVAKHLAEKGV-R-----KITVANRTL--ERAEELAEEFG-------GEAIPLDELPEALAEAD 244 (423)
T ss_pred cCCEEEEEC-chHHHHHHHHHHHHCCC-C-----eEEEEeCCH--HHHHHHHHHcC-------CcEeeHHHHHHHhccCC
Confidence 347999999 69999999998887653 2 689999874 33332222221 01111234567789999
Q ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcccc
Q 020022 84 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANT 136 (332)
Q Consensus 84 iVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~~~ 136 (332)
+||.+.|.+.. -.+ .+.++.. +..-..++.+++-+++|-|+
T Consensus 245 vVI~aT~s~~~-~i~--------~~~l~~~---~~~~~~~~~vviDla~Prdi 285 (423)
T PRK00045 245 IVISSTGAPHP-IIG--------KGMVERA---LKARRHRPLLLVDLAVPRDI 285 (423)
T ss_pred EEEECCCCCCc-EEc--------HHHHHHH---HhhccCCCeEEEEeCCCCCC
Confidence 99998765521 111 1111111 11111124678889999875
No 451
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.72 E-value=0.05 Score=48.13 Aligned_cols=25 Identities=32% Similarity=0.359 Sum_probs=22.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHhccc
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVM 30 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~ 30 (332)
+.+.|+||+|++|++++..|+..|.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~ 26 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY 26 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC
Confidence 3689999999999999999998763
No 452
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=95.71 E-value=0.034 Score=52.64 Aligned_cols=24 Identities=25% Similarity=0.427 Sum_probs=21.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARG 28 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~ 28 (332)
++||+|+||+|.+|..++..|...
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~ 25 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNH 25 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcC
Confidence 369999999999999999888864
No 453
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=95.66 E-value=0.039 Score=51.94 Aligned_cols=75 Identities=23% Similarity=0.260 Sum_probs=44.8
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCC
Q 020022 2 AKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTG 81 (332)
Q Consensus 2 ~~~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~ 81 (332)
-++.+||+|+||+|.+|..+...|..... +. .+|+++--+. -.|....+.. ..+.+....+.++.+
T Consensus 1 ~~~~~~vaIvGATG~vG~ellrlL~~~~h--P~--~~l~~laS~~----saG~~~~~~~------~~~~v~~~~~~~~~~ 66 (336)
T PRK08040 1 MSEGWNIALLGATGAVGEALLELLAERQF--PV--GELYALASEE----SAGETLRFGG------KSVTVQDAAEFDWSQ 66 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhcCCC--Cc--eEEEEEEccC----cCCceEEECC------cceEEEeCchhhccC
Confidence 03567999999999999999998887421 11 1677774321 1232222211 133343222344578
Q ss_pred CcEEEEeCC
Q 020022 82 VNIAVMVGG 90 (332)
Q Consensus 82 aDiVi~~ag 90 (332)
+|+|+++.+
T Consensus 67 ~Dvvf~a~p 75 (336)
T PRK08040 67 AQLAFFVAG 75 (336)
T ss_pred CCEEEECCC
Confidence 999999864
No 454
>PLN02858 fructose-bisphosphate aldolase
Probab=95.65 E-value=0.068 Score=59.32 Aligned_cols=70 Identities=17% Similarity=0.294 Sum_probs=49.2
Q ss_pred CCCC-CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022 1 MAKE-PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEAC 79 (332)
Q Consensus 1 m~~~-~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al 79 (332)
|+.+ .+||++|| .|.||..++..|+..|. ++..+|+++ +++. .+.+.. .....+..+++
T Consensus 319 ~~~~~~~~IGfIG-lG~MG~~mA~~L~~~G~-------~V~v~dr~~--~~~~----~l~~~G------a~~~~s~~e~~ 378 (1378)
T PLN02858 319 MQAKPVKRIGFIG-LGAMGFGMASHLLKSNF-------SVCGYDVYK--PTLV----RFENAG------GLAGNSPAEVA 378 (1378)
T ss_pred ccccCCCeEEEEC-chHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHH----HHHHcC------CeecCCHHHHH
Confidence 4433 47999999 89999999999998763 799999874 3322 222211 11234567888
Q ss_pred CCCcEEEEeCC
Q 020022 80 TGVNIAVMVGG 90 (332)
Q Consensus 80 ~~aDiVi~~ag 90 (332)
++||+||++..
T Consensus 379 ~~aDvVi~~V~ 389 (1378)
T PLN02858 379 KDVDVLVIMVA 389 (1378)
T ss_pred hcCCEEEEecC
Confidence 99999999854
No 455
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.65 E-value=0.043 Score=51.90 Aligned_cols=74 Identities=19% Similarity=0.295 Sum_probs=44.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
.++||+|+||+|.+|..+...|...+. +. .++..+.-.. -.|...+... ..+.+..-..+++.++|
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~h--P~--~~l~~las~r----saGk~~~~~~------~~~~v~~~~~~~~~~~D 71 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDF--PY--SSLKMLASAR----SAGKKVTFEG------RDYTVEELTEDSFDGVD 71 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCC--Cc--ceEEEEEccC----CCCCeeeecC------ceeEEEeCCHHHHcCCC
Confidence 468999999999999999988876432 11 1565554321 1222222211 12333322345678999
Q ss_pred EEEEeCCC
Q 020022 84 IAVMVGGF 91 (332)
Q Consensus 84 iVi~~ag~ 91 (332)
+||++++.
T Consensus 72 ~vf~a~p~ 79 (344)
T PLN02383 72 IALFSAGG 79 (344)
T ss_pred EEEECCCc
Confidence 99998753
No 456
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.65 E-value=0.1 Score=46.33 Aligned_cols=77 Identities=22% Similarity=0.315 Sum_probs=47.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCc--hhh---hhhhHHHHhhhhcCCccceEeeCChhhhc
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPA--AEA---LNGVKMELVDAAFPLLKGVVATTDAVEAC 79 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~--~~~---l~~~~~dl~~~~~~~~~~~~~~~~~~~al 79 (332)
..||.|+| +|.+|..++..|...|+- .-++.++|++.. .++ +......+.+.... .. ...++.+++
T Consensus 25 ~~rvlvlG-AGgAg~aiA~~L~~~G~~----~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~--~~--~~~~l~~~l 95 (226)
T cd05311 25 EVKIVING-AGAAGIAIARLLLAAGAK----PENIVVVDSKGVIYEGREDDLNPDKNEIAKETNP--EK--TGGTLKEAL 95 (226)
T ss_pred CCEEEEEC-chHHHHHHHHHHHHcCcC----cceEEEEeCCCccccccchhhhHHHHHHHHHhcc--Cc--ccCCHHHHH
Confidence 46999999 699999999999887652 015999999720 011 21122223221100 11 113566889
Q ss_pred CCCcEEEEeCC
Q 020022 80 TGVNIAVMVGG 90 (332)
Q Consensus 80 ~~aDiVi~~ag 90 (332)
+++|+||-+-+
T Consensus 96 ~~~dvlIgaT~ 106 (226)
T cd05311 96 KGADVFIGVSR 106 (226)
T ss_pred hcCCEEEeCCC
Confidence 99999998754
No 457
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=95.61 E-value=0.067 Score=51.89 Aligned_cols=65 Identities=20% Similarity=0.151 Sum_probs=45.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.+|..++..+...|. +|..+|+++ .++....+ +.. .. .+..++++++|+
T Consensus 212 Gk~VlViG-~G~IG~~vA~~lr~~Ga-------~ViV~d~dp--~ra~~A~~---~G~-------~v-~~l~eal~~aDV 270 (425)
T PRK05476 212 GKVVVVAG-YGDVGKGCAQRLRGLGA-------RVIVTEVDP--ICALQAAM---DGF-------RV-MTMEEAAELGDI 270 (425)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEcCCc--hhhHHHHh---cCC-------Ee-cCHHHHHhCCCE
Confidence 46899999 69999999999987764 789999875 22211111 111 11 245678899999
Q ss_pred EEEeCC
Q 020022 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
||.+.|
T Consensus 271 VI~aTG 276 (425)
T PRK05476 271 FVTATG 276 (425)
T ss_pred EEECCC
Confidence 988754
No 458
>PRK06199 ornithine cyclodeaminase; Validated
Probab=95.61 E-value=0.069 Score=51.21 Aligned_cols=77 Identities=13% Similarity=0.244 Sum_probs=53.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcc-cCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGV-MLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~-~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a 82 (332)
...+++|+| +|..+...+..++... -+. +|.++|+++ ++++..+.++.+. ++....+....+.++++++|
T Consensus 154 da~~l~iiG-~G~QA~~~l~a~~~v~~~i~-----~V~v~~r~~--~~a~~f~~~~~~~-~~~~~~v~~~~s~~eav~~A 224 (379)
T PRK06199 154 DSKVVGLLG-PGVMGKTILAAFMAVCPGID-----TIKIKGRGQ--KSLDSFATWVAET-YPQITNVEVVDSIEEVVRGS 224 (379)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHhcCCcc-----EEEEECCCH--HHHHHHHHHHHHh-cCCCceEEEeCCHHHHHcCC
Confidence 357899999 7999988777766521 123 899999984 5555555555432 11112466677899999999
Q ss_pred cEEEEeC
Q 020022 83 NIAVMVG 89 (332)
Q Consensus 83 DiVi~~a 89 (332)
|+|+.+-
T Consensus 225 DIVvtaT 231 (379)
T PRK06199 225 DIVTYCN 231 (379)
T ss_pred CEEEEcc
Confidence 9998753
No 459
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=95.60 E-value=0.035 Score=50.66 Aligned_cols=68 Identities=16% Similarity=0.247 Sum_probs=50.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|..|| .|.+|++++..|+..|. .++.||++. + ...+|++... ++.....|-.++||+
T Consensus 35 ~~~iGFIG-LG~MG~~M~~nLik~G~-------kVtV~dr~~--~----k~~~f~~~Ga------~v~~sPaeVae~sDv 94 (327)
T KOG0409|consen 35 KTRIGFIG-LGNMGSAMVSNLIKAGY-------KVTVYDRTK--D----KCKEFQEAGA------RVANSPAEVAEDSDV 94 (327)
T ss_pred cceeeEEe-eccchHHHHHHHHHcCC-------EEEEEeCcH--H----HHHHHHHhch------hhhCCHHHHHhhcCE
Confidence 36999999 99999999999998874 799999873 2 3345554321 123456788899999
Q ss_pred EEEeCCCC
Q 020022 85 AVMVGGFP 92 (332)
Q Consensus 85 Vi~~ag~~ 92 (332)
||...+.+
T Consensus 95 vitmv~~~ 102 (327)
T KOG0409|consen 95 VITMVPNP 102 (327)
T ss_pred EEEEcCCh
Confidence 99986654
No 460
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.59 E-value=0.14 Score=41.83 Aligned_cols=32 Identities=31% Similarity=0.594 Sum_probs=28.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022 7 RVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (332)
Q Consensus 7 kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (332)
||+|+| +|.+|+.++..|+..|+ + ++.++|.+
T Consensus 1 ~VliiG-~GglGs~ia~~L~~~Gv-~-----~i~ivD~d 32 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLARSGV-G-----KITLIDFD 32 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCC-C-----EEEEEcCC
Confidence 689999 69999999999999886 3 79999976
No 461
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.58 E-value=0.12 Score=48.25 Aligned_cols=65 Identities=12% Similarity=0.053 Sum_probs=42.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.+||+||| .|.+|.+++..|...|+ ++..++... .+... .+... .+... +..+++++||+
T Consensus 3 ~kkIgiIG-~G~mG~AiA~~L~~sG~-------~Viv~~~~~-~~~~~----~a~~~------Gv~~~-s~~ea~~~ADi 62 (314)
T TIGR00465 3 GKTVAIIG-YGSQGHAQALNLRDSGL-------NVIVGLRKG-GASWK----KATED------GFKVG-TVEEAIPQADL 62 (314)
T ss_pred cCEEEEEe-EcHHHHHHHHHHHHCCC-------eEEEEECcC-hhhHH----HHHHC------CCEEC-CHHHHHhcCCE
Confidence 46899999 79999999999998763 455555432 11111 11111 11222 46778899999
Q ss_pred EEEeC
Q 020022 85 AVMVG 89 (332)
Q Consensus 85 Vi~~a 89 (332)
|+++.
T Consensus 63 VvLaV 67 (314)
T TIGR00465 63 IMNLL 67 (314)
T ss_pred EEEeC
Confidence 99985
No 462
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=95.58 E-value=0.05 Score=49.55 Aligned_cols=68 Identities=19% Similarity=0.268 Sum_probs=44.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceE-EEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVI-LHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~e-i~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
+||+||| .|.+|..++..+...+. + .+ +.++|++. ++.+ ++.+.. .....++..+.+.++|+
T Consensus 2 mrIgIIG-~G~iG~~ia~~l~~~~~-~----~elv~v~d~~~--~~a~----~~a~~~-----~~~~~~~~~ell~~~Dv 64 (265)
T PRK13304 2 LKIGIVG-CGAIASLITKAILSGRI-N----AELYAFYDRNL--EKAE----NLASKT-----GAKACLSIDELVEDVDL 64 (265)
T ss_pred CEEEEEC-ccHHHHHHHHHHHcCCC-C----eEEEEEECCCH--HHHH----HHHHhc-----CCeeECCHHHHhcCCCE
Confidence 6999999 79999999988876431 1 13 56788873 3322 222210 11234566676789999
Q ss_pred EEEeCC
Q 020022 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
|++++.
T Consensus 65 Vvi~a~ 70 (265)
T PRK13304 65 VVECAS 70 (265)
T ss_pred EEEcCC
Confidence 999863
No 463
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional
Probab=95.56 E-value=0.15 Score=48.12 Aligned_cols=57 Identities=18% Similarity=0.161 Sum_probs=36.6
Q ss_pred HHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHH-HhhhhcCCccceEeeCChhhhcCCCcEEEEeC
Q 020022 18 GYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKME-LVDAAFPLLKGVVATTDAVEACTGVNIAVMVG 89 (332)
Q Consensus 18 G~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~d-l~~~~~~~~~~~~~~~~~~~al~~aDiVi~~a 89 (332)
|..++..|+..|. +|+++|+++ +.+.....+ +.. ..++..++..+++++||+||++.
T Consensus 32 G~~MA~~La~aG~-------~V~v~Dr~~--~~l~~~~~~~l~~------~Gi~~asd~~eaa~~ADvVIlaV 89 (342)
T PRK12557 32 GSRMAIEFAEAGH-------DVVLAEPNR--SILSEELWKKVED------AGVKVVSDDAEAAKHGEIHILFT 89 (342)
T ss_pred HHHHHHHHHhCCC-------eEEEEECCH--HHhhHHHHHHHHH------CCCEEeCCHHHHHhCCCEEEEEC
Confidence 6778888887662 799999874 222111111 111 13445567778889999999983
No 464
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=95.53 E-value=0.074 Score=51.31 Aligned_cols=65 Identities=17% Similarity=0.088 Sum_probs=44.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.+|..++..+...|. ++..+|+++ .+.. .+. .+.. .. .+..++++++|+
T Consensus 195 Gk~VvViG-~G~IG~~vA~~ak~~Ga-------~ViV~d~dp--~r~~-~A~--~~G~-------~v-~~leeal~~aDV 253 (406)
T TIGR00936 195 GKTVVVAG-YGWCGKGIAMRARGMGA-------RVIVTEVDP--IRAL-EAA--MDGF-------RV-MTMEEAAKIGDI 253 (406)
T ss_pred cCEEEEEC-CCHHHHHHHHHHhhCcC-------EEEEEeCCh--hhHH-HHH--hcCC-------Ee-CCHHHHHhcCCE
Confidence 46999999 79999999999887653 788899875 2221 111 1111 11 134678899999
Q ss_pred EEEeCC
Q 020022 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
||.+.|
T Consensus 254 VItaTG 259 (406)
T TIGR00936 254 FITATG 259 (406)
T ss_pred EEECCC
Confidence 988754
No 465
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=95.52 E-value=0.044 Score=52.38 Aligned_cols=62 Identities=16% Similarity=0.135 Sum_probs=43.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.||+.++..|..-|+ ++..+|... . . . .... ...++.+.++.||+
T Consensus 116 gktvGIIG-~G~IG~~vA~~l~a~G~-------~V~~~dp~~--~--~-~----~~~~--------~~~~L~ell~~sDi 170 (378)
T PRK15438 116 DRTVGIVG-VGNVGRRLQARLEALGI-------KTLLCDPPR--A--D-R----GDEG--------DFRSLDELVQEADI 170 (378)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCcc--c--c-c----cccc--------ccCCHHHHHhhCCE
Confidence 47999999 79999999999987664 799998532 1 0 0 0000 01357888899999
Q ss_pred EEEeCCC
Q 020022 85 AVMVGGF 91 (332)
Q Consensus 85 Vi~~ag~ 91 (332)
|++..-.
T Consensus 171 I~lh~PL 177 (378)
T PRK15438 171 LTFHTPL 177 (378)
T ss_pred EEEeCCC
Confidence 9986543
No 466
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.48 E-value=0.07 Score=53.45 Aligned_cols=64 Identities=17% Similarity=0.093 Sum_probs=45.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.+|+.++..|..-|+ +|..||.....+ ...++ .+... ++.+.++.||+
T Consensus 140 gktvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~~----~~~~~---------g~~~~-~l~ell~~aDi 197 (526)
T PRK13581 140 GKTLGIIG-LGRIGSEVAKRAKAFGM-------KVIAYDPYISPE----RAAQL---------GVELV-SLDELLARADF 197 (526)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCChh----HHHhc---------CCEEE-cHHHHHhhCCE
Confidence 47999999 79999999999987554 799999753111 11111 11222 57888999999
Q ss_pred EEEeCC
Q 020022 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
|++..-
T Consensus 198 V~l~lP 203 (526)
T PRK13581 198 ITLHTP 203 (526)
T ss_pred EEEccC
Confidence 999854
No 467
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.47 E-value=0.04 Score=50.81 Aligned_cols=55 Identities=20% Similarity=0.349 Sum_probs=44.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|||.+|.||..++..|+..|. ++.+++... .+..+.++.||+
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~ga-------tVtv~~~~t--------------------------~~l~e~~~~ADI 205 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHC-------SVTVVHSRS--------------------------TDAKALCRQADI 205 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCC-------EEEEECCCC--------------------------CCHHHHHhcCCE
Confidence 47999999656999999999998763 788887542 135677899999
Q ss_pred EEEeCCCC
Q 020022 85 AVMVGGFP 92 (332)
Q Consensus 85 Vi~~ag~~ 92 (332)
||.+.|.+
T Consensus 206 VIsavg~~ 213 (301)
T PRK14194 206 VVAAVGRP 213 (301)
T ss_pred EEEecCCh
Confidence 99998866
No 468
>PRK08818 prephenate dehydrogenase; Provisional
Probab=95.45 E-value=0.14 Score=48.94 Aligned_cols=57 Identities=14% Similarity=0.161 Sum_probs=41.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
..+||+|||.+|-||..++..|.... + .+|+.+|+.. . ...+..+++++||
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~--~----~~V~g~D~~d--------------~---------~~~~~~~~v~~aD 53 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRM--Q----LEVIGHDPAD--------------P---------GSLDPATLLQRAD 53 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcC--C----CEEEEEcCCc--------------c---------ccCCHHHHhcCCC
Confidence 34699999944999999999998641 2 1788888631 0 0124567789999
Q ss_pred EEEEeC
Q 020022 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+||++.
T Consensus 54 lVilav 59 (370)
T PRK08818 54 VLIFSA 59 (370)
T ss_pred EEEEeC
Confidence 999984
No 469
>PLN02306 hydroxypyruvate reductase
Probab=95.44 E-value=0.084 Score=50.70 Aligned_cols=105 Identities=15% Similarity=0.078 Sum_probs=58.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHH-hcccCCCCCceEEEEEeCCCchhhhhhhHHHHhh-h--hcCCccceEeeCChhhhcC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIA-RGVMLGTDQPVILHMLDIPPAAEALNGVKMELVD-A--AFPLLKGVVATTDAVEACT 80 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~-~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~-~--~~~~~~~~~~~~~~~~al~ 80 (332)
.++|+|+| .|.||+.++..+. .-|+ +|..||.... .........+.. . .......+....++.+.++
T Consensus 165 gktvGIiG-~G~IG~~vA~~l~~~fGm-------~V~~~d~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~ 235 (386)
T PLN02306 165 GQTVGVIG-AGRIGSAYARMMVEGFKM-------NLIYYDLYQS-TRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLR 235 (386)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCC-------EEEEECCCCc-hhhhhhhhhhcccccccccccccccccCCHHHHHh
Confidence 37999999 7999999999875 3332 7899997642 111100001100 0 0000011222347889999
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecC
Q 020022 81 GVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVAN 132 (332)
Q Consensus 81 ~aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tN 132 (332)
.||+|++..-... .+ ..++ |. +.+... +|++++|+++-
T Consensus 236 ~sDiV~lh~Plt~---~T-~~li--n~-------~~l~~M-K~ga~lIN~aR 273 (386)
T PLN02306 236 EADVISLHPVLDK---TT-YHLI--NK-------ERLALM-KKEAVLVNASR 273 (386)
T ss_pred hCCEEEEeCCCCh---hh-hhhc--CH-------HHHHhC-CCCeEEEECCC
Confidence 9999999753321 11 1111 11 233333 47888888873
No 470
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.43 E-value=0.52 Score=43.97 Aligned_cols=162 Identities=15% Similarity=0.115 Sum_probs=94.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCC-----------ccceE-ee
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPL-----------LKGVV-AT 72 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~-----------~~~~~-~~ 72 (332)
.+.+.||||++.+|..+|..|+..|. +|++..++. ++.+..+.++....... ...+. ..
T Consensus 35 ~~~~vVTGansGIG~eta~~La~~Ga-------~Vv~~~R~~--~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa 105 (314)
T KOG1208|consen 35 GKVALVTGATSGIGFETARELALRGA-------HVVLACRNE--ERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFA 105 (314)
T ss_pred CcEEEEECCCCchHHHHHHHHHhCCC-------EEEEEeCCH--HHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHH
Confidence 45788999999999999999999873 788998874 44444455555411100 01111 11
Q ss_pred CChhhhcCCCcEEEEeCCCCCCCCC-CH---HHHHHhhH----HHHHHHHHHHHhhcCCCeEEEEecCccc----chHHH
Q 020022 73 TDAVEACTGVNIAVMVGGFPRKEGM-ER---KDVMSKNV----SIYKAQASALEQHAAPNCKVLVVANPAN----TNALI 140 (332)
Q Consensus 73 ~~~~~al~~aDiVi~~ag~~~~~~~-~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~~viv~tNP~~----~~~~~ 140 (332)
.........-|+.|..||+...+.. +. +..+..|- -++..+.+.+++.+ | ++||++|.=.. -+..+
T Consensus 106 ~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~-~RIV~vsS~~~~~~~~~~~l 183 (314)
T KOG1208|consen 106 EEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-P-SRIVNVSSILGGGKIDLKDL 183 (314)
T ss_pred HHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-C-CCEEEEcCccccCccchhhc
Confidence 1223345678999999998554332 11 12233333 45667778887765 4 68888875221 01111
Q ss_pred HHHhCCCCCCCcEEEechHHHHHHHHHHHHHcCCCCCCee
Q 020022 141 LKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVK 180 (332)
Q Consensus 141 ~~~~~~~~~~~~i~~~t~lds~r~~~~la~~l~v~~~~v~ 180 (332)
-.+..+.+...+.++.+.+...-+-..+++++.- +|+
T Consensus 184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~---~V~ 220 (314)
T KOG1208|consen 184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK---GVT 220 (314)
T ss_pred cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc---Cce
Confidence 1111111332234677788777888888888864 555
No 471
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=95.43 E-value=0.15 Score=49.36 Aligned_cols=66 Identities=15% Similarity=0.104 Sum_probs=45.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
..+|+|+| .|.+|..++..+...|. ++..+|+++ .++. .+.. ... .. ....++++++|+
T Consensus 202 GktVvViG-~G~IG~~va~~ak~~Ga-------~ViV~d~d~--~R~~-~A~~--~G~-------~~-~~~~e~v~~aDV 260 (413)
T cd00401 202 GKVAVVAG-YGDVGKGCAQSLRGQGA-------RVIVTEVDP--ICAL-QAAM--EGY-------EV-MTMEEAVKEGDI 260 (413)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEECCh--hhHH-HHHh--cCC-------EE-ccHHHHHcCCCE
Confidence 46999999 69999999999887764 678899874 3322 1221 111 11 124577899999
Q ss_pred EEEeCCC
Q 020022 85 AVMVGGF 91 (332)
Q Consensus 85 Vi~~ag~ 91 (332)
||.+.|.
T Consensus 261 VI~atG~ 267 (413)
T cd00401 261 FVTTTGN 267 (413)
T ss_pred EEECCCC
Confidence 9988663
No 472
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.35 E-value=0.1 Score=43.61 Aligned_cols=65 Identities=12% Similarity=0.076 Sum_probs=41.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.+||.|+| +|.+|...+..|+..|. ++++++.+ ..+ ...++.. ..+....-.++.+.++|+
T Consensus 13 ~~~vlVvG-GG~va~rka~~Ll~~ga-------~V~VIsp~----~~~-~l~~l~~------i~~~~~~~~~~dl~~a~l 73 (157)
T PRK06719 13 NKVVVIIG-GGKIAYRKASGLKDTGA-------FVTVVSPE----ICK-EMKELPY------ITWKQKTFSNDDIKDAHL 73 (157)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEEcCc----cCH-HHHhccC------cEEEecccChhcCCCceE
Confidence 47999999 69999999999988763 78888643 221 1112211 011111223456899999
Q ss_pred EEEe
Q 020022 85 AVMV 88 (332)
Q Consensus 85 Vi~~ 88 (332)
||.+
T Consensus 74 Viaa 77 (157)
T PRK06719 74 IYAA 77 (157)
T ss_pred EEEC
Confidence 8887
No 473
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.35 E-value=0.054 Score=51.52 Aligned_cols=73 Identities=14% Similarity=0.204 Sum_probs=42.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
+||+|+||+|.+|..+...++...-+. ..+++++.... ..+....+... ..........+.++++|+|
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~---~~~l~~~ss~~----sg~~~~~f~g~-----~~~v~~~~~~~~~~~~Div 69 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFD---LIEPVFFSTSQ----AGGAAPSFGGK-----EGTLQDAFDIDALKKLDII 69 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCC---cCcEEEecchh----hCCcccccCCC-----cceEEecCChhHhcCCCEE
Confidence 689999999999999998666654332 11477765431 11122122110 0111221223557899999
Q ss_pred EEeCC
Q 020022 86 VMVGG 90 (332)
Q Consensus 86 i~~ag 90 (332)
++++|
T Consensus 70 f~a~~ 74 (369)
T PRK06598 70 ITCQG 74 (369)
T ss_pred EECCC
Confidence 99876
No 474
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=95.33 E-value=0.053 Score=51.94 Aligned_cols=62 Identities=15% Similarity=0.099 Sum_probs=44.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+||| .|.||+.++..+..-|+ ++..+|... .... .. . ...++.+.+++||+
T Consensus 116 gktvGIIG-~G~IG~~va~~l~a~G~-------~V~~~Dp~~--~~~~-------~~-------~-~~~~l~ell~~aDi 170 (381)
T PRK00257 116 ERTYGVVG-AGHVGGRLVRVLRGLGW-------KVLVCDPPR--QEAE-------GD-------G-DFVSLERILEECDV 170 (381)
T ss_pred cCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEECCcc--cccc-------cC-------c-cccCHHHHHhhCCE
Confidence 47899999 79999999999987664 799999742 1110 00 0 01357788899999
Q ss_pred EEEeCCC
Q 020022 85 AVMVGGF 91 (332)
Q Consensus 85 Vi~~ag~ 91 (332)
|++..-.
T Consensus 171 V~lh~Pl 177 (381)
T PRK00257 171 ISLHTPL 177 (381)
T ss_pred EEEeCcC
Confidence 9987543
No 475
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.30 E-value=0.046 Score=50.98 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP 45 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~ 45 (332)
++||+|+||+|..|..+...|...+ .+|+.++.-.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp------~ve~~~~ss~ 36 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHP------DVELILISSR 36 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCC------CeEEEEeech
Confidence 5799999999999999999998754 2377777654
No 476
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.28 E-value=0.11 Score=47.58 Aligned_cols=74 Identities=11% Similarity=0.077 Sum_probs=49.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++++|+| +|.+|.+++..|...|.. +|.+++++. ++++..+.++.... .+....+..+.+.++|+
T Consensus 123 ~k~vlVlG-aGg~a~ai~~aL~~~g~~------~V~v~~R~~--~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~~Di 188 (278)
T PRK00258 123 GKRILILG-AGGAARAVILPLLDLGVA------EITIVNRTV--ERAEELAKLFGALG-----KAELDLELQEELADFDL 188 (278)
T ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCC------EEEEEeCCH--HHHHHHHHHhhhcc-----ceeecccchhccccCCE
Confidence 46899999 699999999999987642 799999974 44443333332110 12221234567889999
Q ss_pred EEEeCCCC
Q 020022 85 AVMVGGFP 92 (332)
Q Consensus 85 Vi~~ag~~ 92 (332)
||.+....
T Consensus 189 vInaTp~g 196 (278)
T PRK00258 189 IINATSAG 196 (278)
T ss_pred EEECCcCC
Confidence 99985443
No 477
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=95.23 E-value=0.073 Score=53.33 Aligned_cols=65 Identities=20% Similarity=0.099 Sum_probs=45.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.+|+.+|..|..-|+ ++..||.....+ ...++ .+....++.+.+++||+
T Consensus 138 gktvgIiG-~G~IG~~vA~~l~~fG~-------~V~~~d~~~~~~----~~~~~---------g~~~~~~l~ell~~aDv 196 (525)
T TIGR01327 138 GKTLGVIG-LGRIGSIVAKRAKAFGM-------KVLAYDPYISPE----RAEQL---------GVELVDDLDELLARADF 196 (525)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCC-------EEEEECCCCChh----HHHhc---------CCEEcCCHHHHHhhCCE
Confidence 36999999 89999999999986553 799999742111 11111 11222467888999999
Q ss_pred EEEeCC
Q 020022 85 AVMVGG 90 (332)
Q Consensus 85 Vi~~ag 90 (332)
|++...
T Consensus 197 V~l~lP 202 (525)
T TIGR01327 197 ITVHTP 202 (525)
T ss_pred EEEccC
Confidence 999854
No 478
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.22 E-value=0.054 Score=50.33 Aligned_cols=88 Identities=10% Similarity=0.075 Sum_probs=55.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.||+.++..+..-|+ ++..+|+... .. ... ....++.+.++.||+
T Consensus 122 gktvgIiG-~G~IG~~vA~~l~afG~-------~V~~~~r~~~---~~-------~~~-------~~~~~l~ell~~aDi 176 (303)
T PRK06436 122 NKSLGILG-YGGIGRRVALLAKAFGM-------NIYAYTRSYV---ND-------GIS-------SIYMEPEDIMKKSDF 176 (303)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHCCC-------EEEEECCCCc---cc-------Ccc-------cccCCHHHHHhhCCE
Confidence 47999999 89999999987765453 7999997521 00 000 012357888999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
|++...... .+ ..++ | .+.+... +|++++|+++
T Consensus 177 v~~~lp~t~---~T-~~li--~-------~~~l~~m-k~ga~lIN~s 209 (303)
T PRK06436 177 VLISLPLTD---ET-RGMI--N-------SKMLSLF-RKGLAIINVA 209 (303)
T ss_pred EEECCCCCc---hh-hcCc--C-------HHHHhcC-CCCeEEEECC
Confidence 999853321 11 1111 1 2233333 4788888886
No 479
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.17 E-value=0.096 Score=47.10 Aligned_cols=35 Identities=34% Similarity=0.557 Sum_probs=30.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
..||+|+| +|.+|+.++..|+..|+ + +++++|-+.
T Consensus 32 ~~~VliiG-~GglGs~va~~La~~Gv-g-----~i~lvD~D~ 66 (245)
T PRK05690 32 AARVLVVG-LGGLGCAASQYLAAAGV-G-----TLTLVDFDT 66 (245)
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCC-C-----EEEEEcCCE
Confidence 46999999 69999999999999885 4 799999764
No 480
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.16 E-value=0.053 Score=46.68 Aligned_cols=77 Identities=9% Similarity=0.103 Sum_probs=48.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|||.+.-||..++.+|+..+. .+..+|++....+..+. .+.|...+. -....++.+.++.||+
T Consensus 62 GK~vvVIGrS~iVGkPla~lL~~~~A-------tVti~~~~~~~~~~~~~--~~~hs~t~~---~~~~~~l~~~~~~ADI 129 (197)
T cd01079 62 GKTITIINRSEVVGRPLAALLANDGA-------RVYSVDINGIQVFTRGE--SIRHEKHHV---TDEEAMTLDCLSQSDV 129 (197)
T ss_pred CCEEEEECCCccchHHHHHHHHHCCC-------EEEEEecCccccccccc--ccccccccc---cchhhHHHHHhhhCCE
Confidence 47999999888999999999998763 78999876421111110 011111000 0001125678899999
Q ss_pred EEEeCCCCC
Q 020022 85 AVMVGGFPR 93 (332)
Q Consensus 85 Vi~~ag~~~ 93 (332)
||.+.|.+.
T Consensus 130 VIsAvG~~~ 138 (197)
T cd01079 130 VITGVPSPN 138 (197)
T ss_pred EEEccCCCC
Confidence 999998763
No 481
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.15 E-value=0.088 Score=44.08 Aligned_cols=56 Identities=20% Similarity=0.259 Sum_probs=40.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
..++|+|+|.++.||..++.+|...+. .+.+.+... .++.+.++.||
T Consensus 35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~a-------tVt~~h~~T--------------------------~~l~~~~~~AD 81 (160)
T PF02882_consen 35 EGKKVVVVGRSNIVGKPLAMLLLNKGA-------TVTICHSKT--------------------------KNLQEITRRAD 81 (160)
T ss_dssp TT-EEEEE-TTTTTHHHHHHHHHHTT--------EEEEE-TTS--------------------------SSHHHHHTTSS
T ss_pred CCCEEEEECCcCCCChHHHHHHHhCCC-------eEEeccCCC--------------------------Ccccceeeecc
Confidence 347999999888899999999998753 677776431 24556678999
Q ss_pred EEEEeCCCC
Q 020022 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.++|.+
T Consensus 82 IVVsa~G~~ 90 (160)
T PF02882_consen 82 IVVSAVGKP 90 (160)
T ss_dssp EEEE-SSST
T ss_pred EEeeeeccc
Confidence 999999876
No 482
>PRK06046 alanine dehydrogenase; Validated
Probab=95.13 E-value=0.11 Score=48.72 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=49.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
.+.+|+|+| +|.+|...+..+....-+. ++.++|+++ ++++..+.++.+. ....+....+..++++ +|
T Consensus 128 ~~~~vgiiG-~G~qa~~h~~al~~~~~i~-----~v~v~~r~~--~~~~~~~~~~~~~---~~~~v~~~~~~~~~l~-aD 195 (326)
T PRK06046 128 DSKVVGIIG-AGNQARTQLLALSEVFDLE-----EVRVYDRTK--SSAEKFVERMSSV---VGCDVTVAEDIEEACD-CD 195 (326)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhhCCce-----EEEEECCCH--HHHHHHHHHHHhh---cCceEEEeCCHHHHhh-CC
Confidence 357899999 7999998887776432222 799999984 4444444444321 1223455567778886 99
Q ss_pred EEEEeC
Q 020022 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+|+++-
T Consensus 196 iVv~aT 201 (326)
T PRK06046 196 ILVTTT 201 (326)
T ss_pred EEEEec
Confidence 999874
No 483
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.13 E-value=0.084 Score=51.73 Aligned_cols=90 Identities=14% Similarity=0.098 Sum_probs=57.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.+|..++..+...|. +|..+|+++ .+.. .+.. +. +.. .+..++++.||+
T Consensus 254 GKtVgVIG-~G~IGr~vA~rL~a~Ga-------~ViV~e~dp--~~a~-~A~~--~G-------~~~-~~leell~~ADI 312 (476)
T PTZ00075 254 GKTVVVCG-YGDVGKGCAQALRGFGA-------RVVVTEIDP--ICAL-QAAM--EG-------YQV-VTLEDVVETADI 312 (476)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCc--hhHH-HHHh--cC-------cee-ccHHHHHhcCCE
Confidence 46999999 79999999999987654 688898874 2211 1111 11 111 246788999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP 133 (332)
||.+.|... ++. .+.+... +|++++++++-.
T Consensus 313 VI~atGt~~---------------iI~--~e~~~~M-KpGAiLINvGr~ 343 (476)
T PTZ00075 313 FVTATGNKD---------------IIT--LEHMRRM-KNNAIVGNIGHF 343 (476)
T ss_pred EEECCCccc---------------ccC--HHHHhcc-CCCcEEEEcCCC
Confidence 999865321 110 1233333 467889888754
No 484
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=95.11 E-value=0.084 Score=49.48 Aligned_cols=73 Identities=21% Similarity=0.220 Sum_probs=50.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
...++||| +|..+..-+..+...--+. +|+++|+++ +..+..+.++.... ...+....+.++|+++||+
T Consensus 130 a~~laiIG-aG~qA~~ql~a~~~v~~~~-----~I~i~~r~~--~~~e~~a~~l~~~~---~~~v~a~~s~~~av~~aDi 198 (330)
T COG2423 130 ASTLAIIG-AGAQARTQLEALKAVRDIR-----EIRVYSRDP--EAAEAFAARLRKRG---GEAVGAADSAEEAVEGADI 198 (330)
T ss_pred CcEEEEEC-CcHHHHHHHHHHHhhCCcc-----EEEEEcCCH--HHHHHHHHHHHhhc---CccceeccCHHHHhhcCCE
Confidence 45789999 6998887776666532112 899999985 45555555554432 1245556678999999999
Q ss_pred EEEe
Q 020022 85 AVMV 88 (332)
Q Consensus 85 Vi~~ 88 (332)
|+.+
T Consensus 199 Ivt~ 202 (330)
T COG2423 199 VVTA 202 (330)
T ss_pred EEEe
Confidence 8876
No 485
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=95.10 E-value=0.21 Score=45.17 Aligned_cols=85 Identities=14% Similarity=0.121 Sum_probs=54.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEE-EEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhh-cCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVIL-HMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEA-CTGV 82 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei-~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~a-l~~a 82 (332)
.+||+||| .|.+|+.++..|..... ...++ .++|++. ++.+ .+... ....+++.+- ....
T Consensus 2 ~~rvgiIG-~GaIG~~va~~l~~~~~----~~~~l~~V~~~~~--~~~~----~~~~~-------~~~~~~l~~ll~~~~ 63 (267)
T PRK13301 2 THRIAFIG-LGAIASDVAAGLLADAA----QPCQLAALTRNAA--DLPP----ALAGR-------VALLDGLPGLLAWRP 63 (267)
T ss_pred ceEEEEEC-ccHHHHHHHHHHhcCCC----CceEEEEEecCCH--HHHH----Hhhcc-------CcccCCHHHHhhcCC
Confidence 46999999 79999999999876432 11233 4466542 2222 22221 1133455553 4789
Q ss_pred cEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCC
Q 020022 83 NIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPN 124 (332)
Q Consensus 83 DiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~ 124 (332)
|+||.+|+ ...++++++.+-+.+ .|
T Consensus 64 DlVVE~A~----------------~~av~e~~~~iL~~g-~d 88 (267)
T PRK13301 64 DLVVEAAG----------------QQAIAEHAEGCLTAG-LD 88 (267)
T ss_pred CEEEECCC----------------HHHHHHHHHHHHhcC-CC
Confidence 99999986 356889999998876 45
No 486
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.09 E-value=0.1 Score=45.34 Aligned_cols=35 Identities=31% Similarity=0.413 Sum_probs=29.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
..++|+|+| .|.+|++++..|...|. +|+.+|+++
T Consensus 27 ~gk~v~I~G-~G~vG~~~A~~L~~~G~-------~Vvv~D~~~ 61 (200)
T cd01075 27 EGKTVAVQG-LGKVGYKLAEHLLEEGA-------KLIVADINE 61 (200)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEcCCH
Confidence 347999999 79999999999998764 788999874
No 487
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.08 E-value=0.068 Score=45.19 Aligned_cols=55 Identities=16% Similarity=0.286 Sum_probs=42.0
Q ss_pred CCcEEEEEcCCCc-hHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCC
Q 020022 4 EPVRVLVTGAAGQ-IGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGV 82 (332)
Q Consensus 4 ~~~kI~IiGa~G~-vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~a 82 (332)
..+||+|+| +|. +|..++..|...+. ++.+.+++. .++.+.+++|
T Consensus 43 ~gk~vlViG-~G~~~G~~~a~~L~~~g~-------~V~v~~r~~--------------------------~~l~~~l~~a 88 (168)
T cd01080 43 AGKKVVVVG-RSNIVGKPLAALLLNRNA-------TVTVCHSKT--------------------------KNLKEHTKQA 88 (168)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhhCCC-------EEEEEECCc--------------------------hhHHHHHhhC
Confidence 347999999 576 58889999987653 578887541 2456778999
Q ss_pred cEEEEeCCCC
Q 020022 83 NIAVMVGGFP 92 (332)
Q Consensus 83 DiVi~~ag~~ 92 (332)
|+||.+.+.+
T Consensus 89 DiVIsat~~~ 98 (168)
T cd01080 89 DIVIVAVGKP 98 (168)
T ss_pred CEEEEcCCCC
Confidence 9999997766
No 488
>PLN02494 adenosylhomocysteinase
Probab=95.01 E-value=0.11 Score=50.90 Aligned_cols=90 Identities=12% Similarity=0.141 Sum_probs=57.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++|+|+| .|.+|..++..+...|. +|..+|+++ .++. .+. .+.. . . ....++++.+|+
T Consensus 254 GKtVvViG-yG~IGr~vA~~aka~Ga-------~VIV~e~dp--~r~~-eA~--~~G~-~------v-v~leEal~~ADV 312 (477)
T PLN02494 254 GKVAVICG-YGDVGKGCAAAMKAAGA-------RVIVTEIDP--ICAL-QAL--MEGY-Q------V-LTLEDVVSEADI 312 (477)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCC-------EEEEEeCCc--hhhH-HHH--hcCC-e------e-ccHHHHHhhCCE
Confidence 47899999 79999999999986653 688899874 2211 111 1111 0 1 135678899999
Q ss_pred EEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCc
Q 020022 85 AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANP 133 (332)
Q Consensus 85 Vi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP 133 (332)
||.+.|... ++. .+.+... ++++++++++-+
T Consensus 313 VI~tTGt~~---------------vI~--~e~L~~M-K~GAiLiNvGr~ 343 (477)
T PLN02494 313 FVTTTGNKD---------------IIM--VDHMRKM-KNNAIVCNIGHF 343 (477)
T ss_pred EEECCCCcc---------------chH--HHHHhcC-CCCCEEEEcCCC
Confidence 998765321 110 1233333 467899999875
No 489
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=95.00 E-value=0.084 Score=44.66 Aligned_cols=109 Identities=16% Similarity=0.170 Sum_probs=65.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchh-----hhhhhHHHHhhhhcCCccceEeeCChhhh
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAE-----ALNGVKMELVDAAFPLLKGVVATTDAVEA 78 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~-----~l~~~~~dl~~~~~~~~~~~~~~~~~~~a 78 (332)
.++...|+||+|-.|+.+...++..+.|+ .++++-+.+-.+ .+.....|++.. .+..++
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E~~~FS-----KV~~i~RR~~~d~at~k~v~q~~vDf~Kl-----------~~~a~~ 80 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQEAPQFS-----KVYAILRRELPDPATDKVVAQVEVDFSKL-----------SQLATN 80 (238)
T ss_pred hccceEEEeccccccHHHHHHHHhcccce-----eEEEEEeccCCCccccceeeeEEechHHH-----------HHHHhh
Confidence 45678999999999999999999999988 666665542110 011112233222 245677
Q ss_pred cCCCcEEEEeCCCCC-CCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEec
Q 020022 79 CTGVNIAVMVGGFPR-KEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVA 131 (332)
Q Consensus 79 l~~aDiVi~~ag~~~-~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~t 131 (332)
..+.|+.+++-|..| +.|- +.+....-+.+.+.++..++-+.+ .++++.|
T Consensus 81 ~qg~dV~FcaLgTTRgkaGa--dgfykvDhDyvl~~A~~AKe~Gck-~fvLvSS 131 (238)
T KOG4039|consen 81 EQGPDVLFCALGTTRGKAGA--DGFYKVDHDYVLQLAQAAKEKGCK-TFVLVSS 131 (238)
T ss_pred hcCCceEEEeeccccccccc--CceEeechHHHHHHHHHHHhCCCe-EEEEEec
Confidence 899999999888776 3332 122233334444556655555433 3444444
No 490
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=94.99 E-value=0.065 Score=51.96 Aligned_cols=73 Identities=14% Similarity=0.129 Sum_probs=50.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.+||+|+| +|.+|..++..|...|. . +|.++.++. ++++..+..+.. .......++.+.+.++|+
T Consensus 181 ~kkvlviG-aG~~a~~va~~L~~~g~-~-----~I~V~nRt~--~ra~~La~~~~~------~~~~~~~~l~~~l~~aDi 245 (414)
T PRK13940 181 SKNVLIIG-AGQTGELLFRHVTALAP-K-----QIMLANRTI--EKAQKITSAFRN------ASAHYLSELPQLIKKADI 245 (414)
T ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCC-C-----EEEEECCCH--HHHHHHHHHhcC------CeEecHHHHHHHhccCCE
Confidence 46999999 69999999999988764 2 699999873 333333222211 112222456788999999
Q ss_pred EEEeCCCC
Q 020022 85 AVMVGGFP 92 (332)
Q Consensus 85 Vi~~ag~~ 92 (332)
||.+-+.|
T Consensus 246 VI~aT~a~ 253 (414)
T PRK13940 246 IIAAVNVL 253 (414)
T ss_pred EEECcCCC
Confidence 99987765
No 491
>PLN02858 fructose-bisphosphate aldolase
Probab=94.97 E-value=0.14 Score=56.82 Aligned_cols=66 Identities=14% Similarity=0.184 Sum_probs=48.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
...||++|| .|.||+.++..|+..|. ++..||+++ ++.+ ++.+.. ........++.++||
T Consensus 3 ~~~~IGfIG-LG~MG~~mA~~L~~~G~-------~v~v~dr~~--~~~~----~l~~~G------a~~~~s~~e~a~~ad 62 (1378)
T PLN02858 3 SAGVVGFVG-LDSLSFELASSLLRSGF-------KVQAFEIST--PLME----KFCELG------GHRCDSPAEAAKDAA 62 (1378)
T ss_pred CCCeEEEEc-hhHHHHHHHHHHHHCCC-------eEEEEcCCH--HHHH----HHHHcC------CeecCCHHHHHhcCC
Confidence 346899999 89999999999998763 799999974 3332 233211 123346778889999
Q ss_pred EEEEeC
Q 020022 84 IAVMVG 89 (332)
Q Consensus 84 iVi~~a 89 (332)
+||++.
T Consensus 63 vVi~~l 68 (1378)
T PLN02858 63 ALVVVL 68 (1378)
T ss_pred EEEEEc
Confidence 999984
No 492
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=94.96 E-value=0.098 Score=52.27 Aligned_cols=119 Identities=17% Similarity=0.256 Sum_probs=71.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhc-----ccCCCCCc-eEEEEEeCCCchhhhhhhHHH-HhhhhcCCccceEeeCChhhh
Q 020022 6 VRVLVTGAAGQIGYALVPMIARG-----VMLGTDQP-VILHMLDIPPAAEALNGVKME-LVDAAFPLLKGVVATTDAVEA 78 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~-----~~~~~~~~-~ei~L~D~~~~~~~l~~~~~d-l~~~~~~~~~~~~~~~~~~~a 78 (332)
.||.+.| +|..|..++.+|... |+ +.++. -.+.++|.+. .+.....| +.+...++.+......++.++
T Consensus 322 ~riv~~G-AGsAgigia~ll~~~~~~~~Gl-s~eeA~~~i~~vD~~G---Li~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 396 (581)
T PLN03129 322 QRILFAG-AGEAGTGIAELIALAMSRQTGI-SEEEARKRIWLVDSKG---LVTKSRKDSLQPFKKPFAHDHEPGASLLEA 396 (581)
T ss_pred ceEEEEC-CCHHHHHHHHHHHHHHHhhcCC-ChhhhcCcEEEEcCCC---eEeCCCCccChHHHHHHHhhcccCCCHHHH
Confidence 6999999 699999999888763 43 11111 1689999763 22111111 222111111111123579999
Q ss_pred cCC--CcEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhcCCCeEEEEecCcc---cchHHHHHHh
Q 020022 79 CTG--VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPA---NTNALILKEF 144 (332)
Q Consensus 79 l~~--aDiVi~~ag~~~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~~viv~tNP~---~~~~~~~~~~ 144 (332)
+++ +|++|=+.+.+ |- +.+++++.+.+++ +..+|.-.|||. .+...-+.+.
T Consensus 397 v~~vkptvLIG~S~~~---g~-----------Ft~evi~~Ma~~~-~rPIIFaLSNPt~~~E~~pe~a~~~ 452 (581)
T PLN03129 397 VKAIKPTVLIGLSGVG---GT-----------FTKEVLEAMASLN-ERPIIFALSNPTSKAECTAEEAYTW 452 (581)
T ss_pred HhccCCCEEEEecCCC---CC-----------CCHHHHHHHHhcC-CCCEEEECCCCCCCcCcCHHHHHHh
Confidence 999 89988765543 21 2346777777787 456677789997 4555555554
No 493
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.96 E-value=0.11 Score=42.59 Aligned_cols=56 Identities=20% Similarity=0.264 Sum_probs=43.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCc
Q 020022 4 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN 83 (332)
Q Consensus 4 ~~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aD 83 (332)
+.++|+|+|.+..+|..++..|...+. ++.+.+.+. .+..+++++||
T Consensus 27 ~gk~v~VvGrs~~vG~pla~lL~~~ga-------tV~~~~~~t--------------------------~~l~~~v~~AD 73 (140)
T cd05212 27 DGKKVLVVGRSGIVGAPLQCLLQRDGA-------TVYSCDWKT--------------------------IQLQSKVHDAD 73 (140)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-------EEEEeCCCC--------------------------cCHHHHHhhCC
Confidence 357999999888999999999987653 677776431 14566789999
Q ss_pred EEEEeCCCC
Q 020022 84 IAVMVGGFP 92 (332)
Q Consensus 84 iVi~~ag~~ 92 (332)
+||.+.|.+
T Consensus 74 IVvsAtg~~ 82 (140)
T cd05212 74 VVVVGSPKP 82 (140)
T ss_pred EEEEecCCC
Confidence 999998866
No 494
>PLN00203 glutamyl-tRNA reductase
Probab=94.95 E-value=0.15 Score=50.85 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=48.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
..||+|+| +|.+|..++..|...|. . +|.+++++. +++......+... ...+....+..+++.++|+
T Consensus 266 ~kkVlVIG-AG~mG~~~a~~L~~~G~-~-----~V~V~nRs~--era~~La~~~~g~----~i~~~~~~dl~~al~~aDV 332 (519)
T PLN00203 266 SARVLVIG-AGKMGKLLVKHLVSKGC-T-----KMVVVNRSE--ERVAALREEFPDV----EIIYKPLDEMLACAAEADV 332 (519)
T ss_pred CCEEEEEe-CHHHHHHHHHHHHhCCC-C-----eEEEEeCCH--HHHHHHHHHhCCC----ceEeecHhhHHHHHhcCCE
Confidence 57999999 69999999999887663 2 689999874 4443322222110 0011122356788999999
Q ss_pred EEEeCCCC
Q 020022 85 AVMVGGFP 92 (332)
Q Consensus 85 Vi~~ag~~ 92 (332)
||.+-+.+
T Consensus 333 VIsAT~s~ 340 (519)
T PLN00203 333 VFTSTSSE 340 (519)
T ss_pred EEEccCCC
Confidence 98875443
No 495
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=94.95 E-value=0.083 Score=44.18 Aligned_cols=66 Identities=26% Similarity=0.313 Sum_probs=42.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
-++++|+| -|.+|+.+|..|...|. .+..+|+++- ..+++ .+ +. +... ...++++.+|+
T Consensus 23 Gk~vvV~G-YG~vG~g~A~~lr~~Ga-------~V~V~e~DPi-~alqA-~~---dG-------f~v~-~~~~a~~~adi 81 (162)
T PF00670_consen 23 GKRVVVIG-YGKVGKGIARALRGLGA-------RVTVTEIDPI-RALQA-AM---DG-------FEVM-TLEEALRDADI 81 (162)
T ss_dssp TSEEEEE---SHHHHHHHHHHHHTT--------EEEEE-SSHH-HHHHH-HH---TT--------EEE--HHHHTTT-SE
T ss_pred CCEEEEeC-CCcccHHHHHHHhhCCC-------EEEEEECChH-HHHHh-hh---cC-------cEec-CHHHHHhhCCE
Confidence 36899999 79999999999998774 7999999851 11211 11 22 1222 47889999999
Q ss_pred EEEeCCC
Q 020022 85 AVMVGGF 91 (332)
Q Consensus 85 Vi~~ag~ 91 (332)
+|.+-|.
T Consensus 82 ~vtaTG~ 88 (162)
T PF00670_consen 82 FVTATGN 88 (162)
T ss_dssp EEE-SSS
T ss_pred EEECCCC
Confidence 9887664
No 496
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.88 E-value=0.16 Score=46.19 Aligned_cols=73 Identities=12% Similarity=0.059 Sum_probs=46.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.++++|+| +|.+|.+++..|+..+. ++.++|+++ ++++..+.++... . .....+.....+.++|+
T Consensus 117 ~k~vliiG-aGg~g~aia~~L~~~g~-------~v~v~~R~~--~~~~~la~~~~~~--~---~~~~~~~~~~~~~~~Di 181 (270)
T TIGR00507 117 NQRVLIIG-AGGAARAVALPLLKADC-------NVIIANRTV--SKAEELAERFQRY--G---EIQAFSMDELPLHRVDL 181 (270)
T ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHhhc--C---ceEEechhhhcccCccE
Confidence 46899999 59999999999987652 688999874 4444333333221 0 11122222234568999
Q ss_pred EEEeCCCC
Q 020022 85 AVMVGGFP 92 (332)
Q Consensus 85 Vi~~ag~~ 92 (332)
||.+.+..
T Consensus 182 vInatp~g 189 (270)
T TIGR00507 182 IINATSAG 189 (270)
T ss_pred EEECCCCC
Confidence 99987654
No 497
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=94.85 E-value=0.082 Score=50.06 Aligned_cols=34 Identities=21% Similarity=0.375 Sum_probs=26.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEE-EEeCC
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILH-MLDIP 45 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~-L~D~~ 45 (332)
+||+|+||+|.+|..++..|..... .+++ +++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~------~el~~l~~s~ 35 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPE------VEITYLVSSR 35 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEeccc
Confidence 5899999999999999999886532 1566 66654
No 498
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.83 E-value=0.09 Score=48.32 Aligned_cols=76 Identities=17% Similarity=0.122 Sum_probs=47.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcE
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNI 84 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 84 (332)
.+++.|+| +|.+|.+++..|+..|. . +|.+++++. ++++..+.++.... . ...+....+..+.+.++|+
T Consensus 125 ~k~vlvlG-aGGaarai~~aL~~~G~-~-----~i~I~nRt~--~ka~~La~~~~~~~-~-~~~~~~~~~~~~~~~~~Di 193 (282)
T TIGR01809 125 GFRGLVIG-AGGTSRAAVYALASLGV-T-----DITVINRNP--DKLSRLVDLGVQVG-V-ITRLEGDSGGLAIEKAAEV 193 (282)
T ss_pred CceEEEEc-CcHHHHHHHHHHHHcCC-C-----eEEEEeCCH--HHHHHHHHHhhhcC-c-ceeccchhhhhhcccCCCE
Confidence 46899999 69999999999998774 2 699999873 45544443332110 0 0011000123355688999
Q ss_pred EEEeCCC
Q 020022 85 AVMVGGF 91 (332)
Q Consensus 85 Vi~~ag~ 91 (332)
||.+-..
T Consensus 194 VInaTp~ 200 (282)
T TIGR01809 194 LVSTVPA 200 (282)
T ss_pred EEECCCC
Confidence 9997443
No 499
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.83 E-value=0.17 Score=44.92 Aligned_cols=35 Identities=34% Similarity=0.466 Sum_probs=30.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCC
Q 020022 5 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP 46 (332)
Q Consensus 5 ~~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~ 46 (332)
..||+|+| +|.+|+.++..|+..|+ + +++|+|-+.
T Consensus 21 ~~~VlivG-~GglGs~va~~La~~Gv-g-----~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVG-AGGLGSPAAEYLAAAGV-G-----KLGLVDDDV 55 (228)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCC-C-----EEEEEcCCE
Confidence 46999999 79999999999999886 4 799998653
No 500
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.82 E-value=0.099 Score=46.95 Aligned_cols=75 Identities=23% Similarity=0.302 Sum_probs=48.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHhcccCCCCCceEEEEEeCCCchhhhhhhHHHHhhhhcCCccceEeeCChhhhcCCCcEE
Q 020022 6 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIA 85 (332)
Q Consensus 6 ~kI~IiGa~G~vG~~la~~l~~~~~~~~~~~~ei~L~D~~~~~~~l~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDiV 85 (332)
++|.|+||+|++|++++..|+..+. +++..-+++ +.+.... .... ....++.....+..+++|.|.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~-------~v~~~~r~~--~~~~~~~---~~v~-~~~~d~~~~~~l~~a~~G~~~~ 67 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH-------EVRAAVRNP--EAAAALA---GGVE-VVLGDLRDPKSLVAGAKGVDGV 67 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC-------EEEEEEeCH--HHHHhhc---CCcE-EEEeccCCHhHHHHHhccccEE
Confidence 4899999999999999999998752 666666653 3332211 0110 0011222233567889999999
Q ss_pred EEeCCCCC
Q 020022 86 VMVGGFPR 93 (332)
Q Consensus 86 i~~ag~~~ 93 (332)
++..+...
T Consensus 68 ~~i~~~~~ 75 (275)
T COG0702 68 LLISGLLD 75 (275)
T ss_pred EEEecccc
Confidence 99876543
Done!