BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020024
(332 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UUE0|YNZC_SCHPO UPF0655 protein C17G9.12c OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPBC17G9.12c PE=3 SV=1
Length = 274
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 126/312 (40%), Gaps = 50/312 (16%)
Query: 32 LIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYT 91
++ DFD T T D+ +LAE N+PE W ++S +Y
Sbjct: 1 MLYIVDFDETITTYDTIHLLAEAV---------NKPEE-------------WSVISDKYW 38
Query: 92 EEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG 151
+EY E+ S + ++ L + E+ + R+ +S G++ +
Sbjct: 39 QEYLAWREALPHSTTLTSY-----LPLLGGSRYLEEASIKRIEKSQYFSGLSEGALDNIV 93
Query: 152 ERLSLQDGCTTFFQKVVKNENLNANV-HVLSYCWCGDLIRASF---SSAGLNALNVHANE 207
+ ++L+ G F +V + ++ + HVLS W +I + + + L VHAN+
Sbjct: 94 QLITLRAGFVEFINALVPDLRVSKTIFHVLSVNWSARVIEQTLLHHTDLTADLLCVHAND 153
Query: 208 FSFKESIST--GEIIEKVESPI-----DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 260
F F S +T G I+ + S + DKV+ F ++ VYIGDS D C
Sbjct: 154 FDFDTSTNTTNGRILARNASSLLMNSTDKVREFRRIVQTDAVSSPLNVVYIGDSPTDFGC 213
Query: 261 LLEADIGIVIGSSSSLRRVGSQF-GVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTV 319
L + I I++ S+ + S+F V + + V+K I+YT
Sbjct: 214 LQISPISILMRSNQKYYDILSRFEDVQLVDISEFPVQKA-----------VPGKKIIYTC 262
Query: 320 SSWAEVHAFILG 331
S W + L
Sbjct: 263 SDWCAIQKAFLA 274
>sp|P25616|YCQ5_YEAST UPF0655 protein YCR015C OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YCR015C PE=3 SV=2
Length = 317
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 48/261 (18%)
Query: 31 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQY 90
+ II SDFD T T VD+ +A++ + P+ L+ WG +K Y
Sbjct: 2 KTIIISDFDETITRVDTICTIAKLPYLLNPR-----------------LKPEWGHFTKTY 44
Query: 91 TEEYEQ----------CIESFMPSEKVE-NFNYETLHKALEQLSH---FEKRANSRVIES 136
+ Y + + S +P+ + NFN + L+ +H E + + + +
Sbjct: 45 MDGYHKYKYNGTRSLPLLSSGVPTIISQSNFN-KLFADELKYQNHNRVVELNSVNEITKQ 103
Query: 137 GVLKGINLEDIK-----KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA 191
+ K I+L+ +K + E L+DG TF VVK N ++ +VLS W + I
Sbjct: 104 QIFKSISLDQMKTFARDQNHEDCLLRDGFKTFCSSVVK--NFESDFYVLSINWSKEFIHE 161
Query: 192 SFSSAGLNALNVHANEF---SFKESIS-TGEIIEKVESPIDKVQAFNNTLEKY--GTDRK 245
L ++ N+ S K S S GE ++ + DKV+ L+K G +++
Sbjct: 162 VIGDRRLKNSHIFCNDLKKVSDKCSQSYNGEFDCRLLTGSDKVKILGEILDKIDSGCNKE 221
Query: 246 NLSV---YIGDSVGDLLCLLE 263
S YIGDS DLL +L
Sbjct: 222 GNSCSYWYIGDSETDLLSILH 242
>sp|P44997|SERB_HAEIN Phosphoserine phosphatase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=serB PE=3 SV=1
Length = 314
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 12/174 (6%)
Query: 96 QCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLS 155
+CI+ V A+ FE+ RV G LKG +++ E L
Sbjct: 118 ECIDEIAKLAGVGELVSAITESAMRGELDFEQSLRCRV---GTLKGAPESILQQVRENLP 174
Query: 156 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFSFKESI 214
L G Q + K + + + D ++A L L+ A N+F ++
Sbjct: 175 LMSGLVETIQTLQKY-GWKTAIASGGFTYFADYLKA------LLQLDFAASNQFDIEDGK 227
Query: 215 STGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 268
TG + V K + + LE+YG D ++ S+ IGD DL + A +G+
Sbjct: 228 LTGLVKGDVVDAQYKAKTLQHLLEEYGIDSRH-SIAIGDGANDLAMMNVAGLGV 280
>sp|P0A504|CTPE_MYCTU Probable cation-transporting ATPase E OS=Mycobacterium tuberculosis
GN=ctpE PE=3 SV=1
Length = 797
Score = 35.0 bits (79), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 228 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQF 283
D+ +A + L+ +G + GD V D+L L +ADIG+ +GS S R +Q
Sbjct: 515 DQKRAIVHALQSHG----HTVAMTGDGVNDVLALKDADIGVAMGSGSPASRAVAQI 566
>sp|P0A505|CTPE_MYCBO Probable cation-transporting ATPase E OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=ctpE PE=3 SV=1
Length = 797
Score = 35.0 bits (79), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 228 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQF 283
D+ +A + L+ +G + GD V D+L L +ADIG+ +GS S R +Q
Sbjct: 515 DQKRAIVHALQSHG----HTVAMTGDGVNDVLALKDADIGVAMGSGSPASRAVAQI 566
>sp|Q9SFB5|SCP27_ARATH Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27
PE=2 SV=1
Length = 459
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 22/138 (15%)
Query: 119 LEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCT-----TFFQKVVKNENL 173
++ S F K NS V LKG + +A D CT +F ++ + L
Sbjct: 278 IDPYSIFTKPCNSTVALKRFLKG-RYPWMSRA------YDPCTERYSNVYFNRLDVQKAL 330
Query: 174 NANVHVLSYCW--CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 231
+ANV LSY W C D++ + + + L+ L + +KE I+ G I D V
Sbjct: 331 HANVTRLSYPWKACSDIVGSYWDDSPLSMLPI------YKELITAGLKIWVFSGDTDAVV 384
Query: 232 AFNNTLEKYGTDRKNLSV 249
T +Y D L+
Sbjct: 385 PITAT--RYSVDALKLAT 400
>sp|P48016|ATH1_YEAST Vacuolar acid trehalase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ATH1 PE=1 SV=1
Length = 1211
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 22/185 (11%)
Query: 75 SSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENF------NYETLHKALEQLSHFEKR 128
+ G L N W L + ++ + P NF Y T+ ++ Q ++ +
Sbjct: 176 APGALNNGWPLRNHRFAGAFVSDFYCLQPKLNSTNFPELDDVGYSTVISSIPQWTNLQF- 234
Query: 129 ANSRVIESGVL--KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 186
S V +S + + L+D+ + LS++DG T + + LN+ +HV S W
Sbjct: 235 --SLVNDSKWFNPQNVTLDDVTNYSQNLSMKDGIVT-----TELDWLNSQIHVKSEIWAH 287
Query: 187 DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN 246
I G+ +L + N + ++ + +D + L GTD KN
Sbjct: 288 RHIHP----LGVVSLEISLNTDHLPSDFDSLDV--NIWDILDFNTSHRTVLHSTGTDEKN 341
Query: 247 LSVYI 251
+V++
Sbjct: 342 NAVFM 346
>sp|Q9ZL53|HMCT_HELPJ Cadmium, zinc and cobalt-transporting ATPase OS=Helicobacter pylori
(strain J99) GN=cadA PE=3 SV=1
Length = 686
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGV 285
P +K F E+Y K ++++GD + D L AD+GI +G S L + + +
Sbjct: 560 PEEKTSVFKTFKERY----KAPAIFVGDGINDAPTLASADVGIGMGKGSELSKQSADIVI 615
Query: 286 T 286
T
Sbjct: 616 T 616
>sp|Q59465|HMCT_HELPY Cadmium, zinc and cobalt-transporting ATPase OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=cadA PE=1 SV=2
Length = 686
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGV 285
P +K F E+Y K ++++GD + D L AD+GI +G S L + + +
Sbjct: 560 PEEKTSVFKTFKERY----KAPAIFVGDGINDAPTLASADVGIGMGKGSELSKQSADIVI 615
Query: 286 T 286
T
Sbjct: 616 T 616
>sp|Q4DCH3|JBP2_TRYCC Bifunctional helicase and thymine dioxygenase JBP2 OS=Trypanosoma
cruzi (strain CL Brener) GN=JBP2 PE=3 SV=1
Length = 1086
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 137 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCW 184
GV +G +L IKK G+ L+ G FF + E+ N VH YCW
Sbjct: 411 GVFEGCHLA-IKKLGKAFRLETGDVLFFDTSL--EHGNTEVHNFDYCW 455
>sp|Q9RQB4|HMCT_HELFE Cadmium, zinc and cobalt-transporting ATPase OS=Helicobacter felis
GN=cadA PE=3 SV=1
Length = 681
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGV 285
P DK+ AF + + + S+++GD + D L AD+ + +GS+S + + + +
Sbjct: 555 PEDKLNAFKD----FQAQHAHKSMFVGDGINDAPTLARADVSMSMGSASQISKESADIVI 610
Query: 286 T 286
T
Sbjct: 611 T 611
>sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1
SV=2
Length = 948
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 213 SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 272
SI E+IEK + + K +RK++ GD V D L +ADIGI +
Sbjct: 548 SIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD 607
Query: 273 SSSLRRVGSQFGVTFIPLYPGL 294
++ R S +T PGL
Sbjct: 608 ATDAARGASDIVLT----EPGL 625
>sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana
GN=ALA8 PE=3 SV=1
Length = 1189
Score = 32.3 bits (72), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRV-GSQFGV 285
K +A L K GT R L+ IGD D+ L EADIG+ I + ++ V S F +
Sbjct: 843 KQKALVTRLVKNGTGRTTLA--IGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAI 898
>sp|P20649|PMA1_ARATH ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1
SV=3
Length = 949
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 213 SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 272
SI E+IEK + + K +RK++ GD V D L +ADIGI +
Sbjct: 548 SIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD 607
Query: 273 SSSLRRVGSQFGVTFIPLYPGL 294
++ R S +T PGL
Sbjct: 608 ATDAARGASDIVLT----EPGL 625
>sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1
Length = 951
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 212 ESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 271
ES+ E+IEK + + K ++K++ GD V D L +ADIGI +
Sbjct: 547 ESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVD 606
Query: 272 SSSSLRRVGSQFGVTFIPLYPGL 294
++ R S +T PGL
Sbjct: 607 DATDAARSASDIVLT----EPGL 625
>sp|O32219|CADA_BACSU Cadmium, zinc and cobalt-transporting ATPase OS=Bacillus subtilis
(strain 168) GN=cadA PE=1 SV=1
Length = 702
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 87/225 (38%), Gaps = 44/225 (19%)
Query: 84 GLLSKQYTEEYE-QCIESFMPSEKVENFNYETLHK----ALEQLSHFEKRANSRVIES-- 136
G L+K E E + E F +E Y LH A + K +S IES
Sbjct: 404 GTLTKGSFEVTEIKPAEGFTKDRLLEAAAYAELHSQHPIAESVRKAYGKMLSSDEIESYE 463
Query: 137 -----GVLKGINLEDI----KKAGERLSLQDGCTTFFQKVVKNENLNANVHV-LSYCWCG 186
G+ +N +I KK ER ++D V +EN VHV + + G
Sbjct: 464 EISGHGIFAKVNGTEILAGNKKLMEREQIED---------VPDENAGTIVHVAVDQRYAG 514
Query: 187 DLI-------RASFSSAGLNALNVHANEFSFKESISTGEIIEKVES---------PIDKV 230
+I A+ + A L +L + +S TGE + K P DKV
Sbjct: 515 AIIIADEIKEDAAQAVADLKSLGIKQTAMLTGDSKQTGEAVGKQLGIGEVYAELLPQDKV 574
Query: 231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 275
A LE + L +++GD + D L ADIG+ +G S
Sbjct: 575 -AQVEALEAKLLPSEKL-IFVGDGINDTPVLARADIGVAMGGLGS 617
>sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica
GN=Os04g0656100 PE=2 SV=1
Length = 951
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 212 ESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 271
E++ E+IEK + + K ++K++ GD V D L +ADIGI +
Sbjct: 547 EALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVA 606
Query: 272 SSSSLRRVGSQFGVTFIPLYPGL 294
++ R S +T PGL
Sbjct: 607 DATDAARSASDIVLT----EPGL 625
>sp|Q58077|Y663_METJA Uncharacterized protein MJ0663 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0663 PE=3 SV=1
Length = 494
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 208 FSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIG--DSVGDLLCLLEAD 265
S+KE + +I+EK+ PI T G + L IG GDL LLEAD
Sbjct: 205 LSYKEIVKISKILEKINCPIA------TTFPARGVINEKLENCIGLVGRRGDLKSLLEAD 258
Query: 266 IGIVIGSSSS 275
I IGSS S
Sbjct: 259 KIINIGSSLS 268
>sp|A0QJI1|SERB_MYCA1 Phosphoserine phosphatase OS=Mycobacterium avium (strain 104)
GN=serB PE=1 SV=1
Length = 411
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 203 VHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLL 262
V ANE + TG ++ + K A ++ G +V +GD D+ L
Sbjct: 294 VAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQ-TVAVGDGANDIDMLA 352
Query: 263 EADIGIVIGSSSSLRRV 279
A +GI + +LR V
Sbjct: 353 AAGLGIAFNAKPALREV 369
>sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1
SV=1
Length = 948
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 214 ISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 273
I E+IEK + + K +RK++ GD V D L +ADIGI + +
Sbjct: 552 IPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADA 611
Query: 274 SSLRRVGSQFGVTFIPLYPGL 294
+ R S +T PGL
Sbjct: 612 TDAARSASDIVLT----EPGL 628
>sp|A8FKT2|SYA_CAMJ8 Alanine--tRNA ligase OS=Campylobacter jejuni subsp. jejuni serotype
O:6 (strain 81116 / NCTC 11828) GN=alaS PE=3 SV=1
Length = 842
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 17/72 (23%)
Query: 114 TLHKAL--EQLSHFEKRANSRVIES--GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVK 169
T HKAL E+L + EKR N +I S +L+ + LE+ KK+ G F
Sbjct: 584 THHKALSKEELENIEKRVNEMIINSSEAILENMPLEEAKKS--------GAIALF----- 630
Query: 170 NENLNANVHVLS 181
NE NV VL+
Sbjct: 631 NEKYQGNVRVLT 642
>sp|P42962|YCSE_BACSU Uncharacterized protein YcsE OS=Bacillus subtilis (strain 168)
GN=ycsE PE=3 SV=2
Length = 249
Score = 31.2 bits (69), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 227 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVT 286
I+K A EK G +N+ + +GDS+ D+ + EA +G+ +G++ + + + + +T
Sbjct: 175 INKAAALAKVTEKLGFTMENV-MAMGDSLNDIAMIKEAGLGVAMGNAQDIVKETADY-IT 232
Query: 287 FIPLYPGLVKKQKEY 301
+ G+ K + +
Sbjct: 233 DTNIEDGVAKAIRHW 247
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,890,604
Number of Sequences: 539616
Number of extensions: 5140294
Number of successful extensions: 15035
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 15024
Number of HSP's gapped (non-prelim): 51
length of query: 332
length of database: 191,569,459
effective HSP length: 118
effective length of query: 214
effective length of database: 127,894,771
effective search space: 27369480994
effective search space used: 27369480994
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)