BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020027
(332 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 172/318 (54%), Gaps = 27/318 (8%)
Query: 32 KKKP------VESEETLPIKLCAFA-YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLST 84
+KKP V +EE + L + L E+ A+D FS++ I+G+G G VY L+
Sbjct: 2 RKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD 61
Query: 85 GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMA 144
G LVAVKR+ F + ++ +S+A H N++ + GF P ER++V ++
Sbjct: 62 GTLVAVKRLKEERX-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFC 204
S+ L E + LDW +R RIA G+ARGL YLH P IIH +KA+NILL+E+F
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 205 ARVCDYGLSFLAPEEK-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL 257
A V D+GL+ L + RG G++ +Y G ++ ++DV+G+GV+LLE++
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYL---STGKSSEKTDVFGYGVMLLELI 237
Query: 258 SGRRC---------EEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACV 308
+G+R ++ +L+ W L+KE + L+D L + + + +L +VAL C
Sbjct: 238 TGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCT 297
Query: 309 GNSRKNRPSIVQVATILN 326
+S RP + +V +L
Sbjct: 298 QSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 161/292 (55%), Gaps = 20/292 (6%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVI 110
+ L E+ A+D F ++ I+G+G G VY L+ G LVAVKR+ F + +
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERT-QGGELQFQTEV 78
Query: 111 KTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIAT 170
+ +S+A H N++ + GF P ER++V ++ S+ L E + LDW +R RIA
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 171 GAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK-------RGL 223
G+ARGL YLH P IIH +KA+NILL+E+F A V D+GL+ L + RG
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGX 198
Query: 224 AGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRC---------EEGLLVKWALPL 274
G++ +Y G ++ ++DV+G+GV+LLE+++G+R ++ +L+ W L
Sbjct: 199 IGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 275 IKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326
+KE + L+D L + + + +L +VAL C +S RP + +V +L
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 23/289 (7%)
Query: 48 AFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFA 107
++ PL +++ AT+ F H+ +IG G G VY +L G VA+KR P S F
Sbjct: 26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFE 83
Query: 108 SVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLR 167
+ I+TLS +HP++V ++GF E I++ +++ +L +L+ ++ + W +RL
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 168 IATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK------- 220
I GAARGL YLH IIH +K+ NILL+E F ++ D+G+S E
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 221 -RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRC-------EEGLLVKWAL 272
+G GY+D +Y+ + G T +SDVY FGVVL E+L R E L +WA+
Sbjct: 201 VKGTLGYIDPEYFIK---GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 273 PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQV 321
+ +++DP LA + L + A+ C+ S ++RPS+ V
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 23/289 (7%)
Query: 48 AFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFA 107
++ PL +++ AT+ F H+ +IG G G VY +L G VA+KR P S F
Sbjct: 26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFE 83
Query: 108 SVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLR 167
+ I+TLS +HP++V ++GF E I++ +++ +L +L+ ++ + W +RL
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 168 IATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK------- 220
I GAARGL YLH IIH +K+ NILL+E F ++ D+G+S E
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 221 -RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRC-------EEGLLVKWAL 272
+G GY+D +Y+ + G T +SDVY FGVVL E+L R E L +WA+
Sbjct: 201 VKGTLGYIDPEYFIK---GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 273 PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQV 321
+ +++DP LA + L + A+ C+ S ++RPS+ V
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 32/303 (10%)
Query: 50 AYPLTEIDAATDGFSHRRI------IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG 103
++ E+ T+ F R I +G+G G VY ++ VAVK++ + ++
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEE 72
Query: 104 FG--FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLD 161
F IK ++ QH N+V +LGFS + +V ++ SL L DG L
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLS 131
Query: 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR 221
W+ R +IA GAA G+ +LH+ + IH IK++NILL+E F A++ D+GL+ + + +
Sbjct: 132 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 222 --------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG------RRCEEGLL 267
G Y+ E G T +SD+Y FGVVLLEI++G R + LL
Sbjct: 189 TVMXXRIVGTTAYM----APEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 268 VKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
+E + +D ++ + + + VA C+ + RP I +V +L
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 328 LVG 330
+
Sbjct: 304 MTA 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 32/303 (10%)
Query: 50 AYPLTEIDAATDGFSHRRI------IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG 103
++ E+ T+ F R I +G+G G VY ++ VAVK++ + ++
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEE 72
Query: 104 FG--FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLD 161
F IK ++ QH N+V +LGFS + +V ++ SL L DG L
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLS 131
Query: 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR 221
W+ R +IA GAA G+ +LH+ + IH IK++NILL+E F A++ D+GL+ + + +
Sbjct: 132 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 222 --------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG------RRCEEGLL 267
G Y+ E G T +SD+Y FGVVLLEI++G R + LL
Sbjct: 189 TVMXSRIVGTTAYM----APEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 268 VKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
+E + +D ++ + + + VA C+ + RP I +V +L
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 328 LVG 330
+
Sbjct: 304 MTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 32/303 (10%)
Query: 50 AYPLTEIDAATDGFSHRRI------IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG 103
++ E+ T+ F R I +G+G G VY ++ VAVK++ + ++
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE 66
Query: 104 FG--FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLD 161
F IK ++ QH N+V +LGFS + +V ++ SL L DG L
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLS 125
Query: 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR 221
W+ R +IA GAA G+ +LH+ + IH IK++NILL+E F A++ D+GL+ + + +
Sbjct: 126 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 222 --------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG------RRCEEGLL 267
G Y+ E G T +SD+Y FGVVLLEI++G R + LL
Sbjct: 183 XVMXXRIVGTTAYM----APEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 238
Query: 268 VKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
+E + +D ++ + + + VA C+ + RP I +V +L
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
Query: 328 LVG 330
+
Sbjct: 298 MTA 300
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 128/267 (47%), Gaps = 20/267 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTV+ A G VAVK + + + F + + +HPNIV +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P IV+E+++ SL LH++ LD RRL +A A+G+ YLH P I+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNRNPP-IV 161
Query: 189 HGCIKASNILLNEKFCARVCDYGLS------FLAPEEKRGLAGYVDDDYWHEKGGGNATR 242
H +K+ N+L+++K+ +VCD+GLS FL+ + G ++ + ++ +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP---SNE 218
Query: 243 ESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAK 302
+SDVY FGV+L E+ + ++ L ++ + F RL IP + P V A
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLN---PAQVVAAVGFK---CKRLEIPRNLNPQV--AA 270
Query: 303 VALACVGNSRKNRPSIVQVATILNNLV 329
+ C N RPS + +L L+
Sbjct: 271 IIEGCWTNEPWKRPSFATIMDLLRPLI 297
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 135/299 (45%), Gaps = 32/299 (10%)
Query: 50 AYPLTEIDAATDGFSHRRI------IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG 103
++ E+ T+ F R I G+G G VY ++ VAVK++ + ++
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE 63
Query: 104 FG--FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLD 161
F IK + QH N+V +LGFS + +V + SL L DG L
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLS 122
Query: 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR 221
W+ R +IA GAA G+ +LH+ + IH IK++NILL+E F A++ D+GL+ + + +
Sbjct: 123 WHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 222 --------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG------RRCEEGLL 267
G Y E G T +SD+Y FGVVLLEI++G R + LL
Sbjct: 180 XVXXSRIVGTTAYX----APEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 235
Query: 268 VKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326
+E + +D + + + VA C+ + RP I +V +L
Sbjct: 236 DIKEEIEDEEKTIEDYIDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 20/267 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTV+ A G VAVK + + + F + + +HPNIV +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P IV+E+++ SL LH++ LD RRL +A A+G+ YLH P I+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNRNPP-IV 161
Query: 189 HGCIKASNILLNEKFCARVCDYGLS------FLAPEEKRGLAGYVDDDYWHEKGGGNATR 242
H +K+ N+L+++K+ +VCD+GLS FL + G ++ + ++ +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEP---SNE 218
Query: 243 ESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAK 302
+SDVY FGV+L E+ + ++ L ++ + F RL IP + P V A
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLN---PAQVVAAVGFK---CKRLEIPRNLNPQV--AA 270
Query: 303 VALACVGNSRKNRPSIVQVATILNNLV 329
+ C N RPS + +L L+
Sbjct: 271 IIEGCWTNEPWKRPSFATIMDLLRPLI 297
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 21/268 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
AP + IV+++ +SL +LH + + + + + IA ARG++YLH A +II
Sbjct: 90 TAP-QLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-----FLAPEEKRGLAG---YVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + + L+G ++ + +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 241 TRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRL 300
+ +SDVY FG+VL E+++G+ + + I EM L P L+ P R+
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIEMVGRGSLSPDLSKVRSNCP-KRM 258
Query: 301 AKVALACVGNSRKNRPSIVQVATILNNL 328
++ C+ R RPS ++ + L
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 21/268 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P + IV+++ +SL +LH + + + + + IA ARG++YLH A +II
Sbjct: 78 TKP-QLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSII 130
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAP--------EEKRGLAGYVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + E+ G ++ + +
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 241 TRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRL 300
+ +SDVY FG+VL E+++G+ + + I EM L P L+ P R+
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIEMVGRGSLSPDLSKVRSNCP-KRM 246
Query: 301 AKVALACVGNSRKNRPSIVQVATILNNL 328
++ C+ R RPS ++ + L
Sbjct: 247 KRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 21/268 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P + IV+++ +SL +LH + + + + + IA ARG++YLH A +II
Sbjct: 90 TKP-QLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-----FLAPEEKRGLAG---YVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + + L+G ++ + +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 241 TRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRL 300
+ +SDVY FG+VL E+++G+ + + I EM L P L+ P R+
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIEMVGRGSLSPDLSKVRSNCP-KRM 258
Query: 301 AKVALACVGNSRKNRPSIVQVATILNNL 328
++ C+ R RPS ++ + L
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 120/290 (41%), Gaps = 39/290 (13%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGK-LVAVKRIHPRLVLSNAG---------FGFAS 108
A + + + IG+G G V+ L K +VA+K L+L ++ F
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKS----LILGDSEGETEMIEKFQEFQR 72
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ +S HPNIV + G P +V EF+ L H D A + W+ +LR+
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRL 127
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILL-----NEKFCARVCDYGLSFLAPEEKRGL 223
A G+EY+ Q P I+H +++ NI L N CA+V D+GLS + GL
Sbjct: 128 MLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL 186
Query: 224 AGYVDDDYWHEKGGGNATRES-----DVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM 278
G W A ES D Y F ++L IL+G EG +++ IK +
Sbjct: 187 LGNFQ---WMAPETIGAEEESYTEKADTYSFAMILYTILTG----EGPFDEYSYGKIKFI 239
Query: 279 RFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
R IP + P RL V C K RP + L+ L
Sbjct: 240 NMIREEGLRPTIPEDCPP--RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
E+DA S +++G G G V + L KL + K I + G+ F
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +IV+E++ SLD +L +++ +++ LR
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G A G++YL +H + A NIL+N +V D+GLS + PE G
Sbjct: 155 --GIASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+VL E++S G W + +IK +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKAVD 264
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 265 EGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
E+DA S +++G G G V + L KL + K I + G+ F
Sbjct: 39 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 93
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +IV+E++ SLD +L +++ +++ LR
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 152
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G A G++YL +H + A NIL+N +V D+GLS + PE G
Sbjct: 153 --GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+VL E++S G W + +IK +
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKAVD 262
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 263 EGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 309
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
AP + IV+++ +SL +LH ++ + + IA A+G++YLH A +II
Sbjct: 74 TAP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSII 126
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAP--------EEKRGLAGYVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + E+ G ++ + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 241 TRESDVYGFGVVLLEILSGR 260
+ +SDVY FG+VL E+++G+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
E+DA S +++G G G V + L KL + K I + G+ F
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +IV+E++ SLD +L +++ +++ LR
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G A G++YL +H + A NIL+N +V D+GLS + PE G
Sbjct: 155 --GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+VL E++S G W + +IK +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKAVD 264
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 265 EGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
E+DA S +++G G G V + L KL + K I + G+ F
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +IV+E++ SLD +L +++ +++ LR
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G A G++YL +H + A NIL+N +V D+GLS + PE G
Sbjct: 155 --GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+VL E++S G W + +IK +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKAVD 264
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 265 EGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
E+DA S +++G G G V + L KL + K I + G+ F
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +IV+E++ SLD +L +++ +++ LR
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G A G++YL +H + A NIL+N +V D+GLS + PE G
Sbjct: 155 --GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+VL E++S G W + +IK +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKAVD 264
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 265 EGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
E+DA S +++G G G V + L KL + K I + G+ F
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +IV+E++ SLD +L +++ +++ LR
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G A G++YL +H + A NIL+N +V D+GLS + PE G
Sbjct: 155 --GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+VL E++S G W + +IK +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKAVD 264
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 265 EGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 43/296 (14%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF---------G 105
E+DA S +++G G G V + L KL + K I + G+ G
Sbjct: 29 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 83
Query: 106 FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRR 165
AS++ HPNI+ + G +IV+E++ SLD +L +++ +++
Sbjct: 84 EASIMGQF---DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 140
Query: 166 LRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRG 222
LR G A G++YL +H + A NIL+N +V D+GLS + PE
Sbjct: 141 LR---GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 223 LAGYVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIK 276
G W T SDV+ +G+VL E++S G W + +IK
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIK 249
Query: 277 EMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
+ L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 250 AVDEGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 299
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 47/288 (16%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFASVIKTLSLAQHPN 120
++IG G G V + L KL + I + +G+ F S + HPN
Sbjct: 13 QVIGAGEFGEVCSGHL---KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
++ + G +I++EF+ SLD +L +N+ +++ LR G A G++YL
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL- 125
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA 240
N +H + A NIL+N +V D+GLS R L D + GG
Sbjct: 126 --ADMNYVHRALAARNILVNSNLVCKVSDFGLS-------RFLEDDTSDPTYTSALGGKI 176
Query: 241 ---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELL 284
T SDV+ +G+V+ E++S G R + + + I++
Sbjct: 177 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ------- 229
Query: 285 DPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
D RL P + L ++ L C R +RP Q+ L+ ++ +P
Sbjct: 230 DYRLPPPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 275
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 43/296 (14%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF---------G 105
E+DA S +++G G G V + L KL + K I + G+ G
Sbjct: 12 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 106 FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRR 165
AS++ HPNI+ + G +IV+E++ SLD +L +++ +++
Sbjct: 67 EASIMGQF---DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 123
Query: 166 LRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRG 222
LR G A G++YL +H + A NIL+N +V D+GLS + PE
Sbjct: 124 LR---GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 223 LAGYVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIK 276
G W T SDV+ +G+VL E++S G W + +IK
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIK 232
Query: 277 EMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
+ L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 233 AVDEGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 282
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 47/288 (16%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFASVIKTLSLAQHPN 120
++IG G G V + L KL + I + +G+ F S + HPN
Sbjct: 39 QVIGAGEFGEVCSGHL---KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
++ + G +I++EF+ SLD +L +N+ +++ LR G A G++YL
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLA 152
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA 240
N +H + A NIL+N +V D+GLS R L D + GG
Sbjct: 153 DM---NYVHRDLAARNILVNSNLVCKVSDFGLS-------RFLEDDTSDPTYTSALGGKI 202
Query: 241 ---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELL 284
T SDV+ +G+V+ E++S G R + + + I++
Sbjct: 203 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ------- 255
Query: 285 DPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
D RL P + L ++ L C R +RP Q+ L+ ++ +P
Sbjct: 256 DYRLPPPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 301
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
E+DA S +++G G G V + L KL + K I + G+ F
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +IV+E + SLD +L +++ +++ LR
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G A G++YL A +H + A NIL+N +V D+GLS + PE G
Sbjct: 155 --GIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+VL E++S G W + +IK +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKAVD 264
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 265 EGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 123/293 (41%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
E+DA S +++G G G V + L KL + K I + G+ F
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +IV+E++ SLD +L +++ +++ LR
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G A G++YL +H + A NIL+N +V D+GL+ + PE G
Sbjct: 155 --GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+VL E++S G W + +IK +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKAVD 264
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 265 EGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P + IV+++ +SL +LH ++ + + IA A+G++YLH A +II
Sbjct: 74 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSII 126
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAP--------EEKRGLAGYVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + E+ G ++ + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 241 TRESDVYGFGVVLLEILSGR 260
+ +SDVY FG+VL E+++G+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P + IV+++ +SL +LH ++ + + IA A+G++YLH A +II
Sbjct: 76 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSII 128
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAP--------EEKRGLAGYVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + E+ G ++ + +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 241 TRESDVYGFGVVLLEILSGR 260
+ +SDVY FG+VL E+++G+
Sbjct: 189 SFQSDVYAFGIVLYELMTGQ 208
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 118/290 (40%), Gaps = 39/290 (13%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGK-LVAVKRIHPRLVLSNAG---------FGFAS 108
A + + + IG+G G V+ L K +VA+K L+L ++ F
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKS----LILGDSEGETEMIEKFQEFQR 72
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ +S HPNIV + G P +V EF+ L H D A + W+ +LR+
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRL 127
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILL-----NEKFCARVCDYGLSFLAPEEKRGL 223
A G+EY+ P I+H +++ NI L N CA+V D+G S + GL
Sbjct: 128 MLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL 186
Query: 224 AGYVDDDYWHEKGGGNATRES-----DVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM 278
G W A ES D Y F ++L IL+G EG +++ IK +
Sbjct: 187 LGNFQ---WMAPETIGAEEESYTEKADTYSFAMILYTILTG----EGPFDEYSYGKIKFI 239
Query: 279 RFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
R IP + P RL V C K RP + L+ L
Sbjct: 240 NMIREEGLRPTIPEDCPP--RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P + IV+++ +SL +LH ++ + + IA A+G++YLH A +II
Sbjct: 79 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSII 131
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAP--------EEKRGLAGYVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + E+ G ++ + +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 241 TRESDVYGFGVVLLEILSGR 260
+ +SDVY FG+VL E+++G+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQ 211
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
E+DA S +++G G G V + L KL + K I + G+ F
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +IV+E++ SLD +L +++ +++ LR
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G A G++YL +H + A NIL+N +V D+GL + PE G
Sbjct: 155 --GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+VL E++S G W + +IK +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKAVD 264
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 265 EGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P + IV+++ +SL +LH ++ + + IA A+G++YLH A +II
Sbjct: 79 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSII 131
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAP--------EEKRGLAGYVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + E+ G ++ + +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 241 TRESDVYGFGVVLLEILSGR 260
+ +SDVY FG+VL E+++G+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQ 211
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
E+DA S +++G G G V + L KL + K I + G+ F
Sbjct: 41 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +IV+E + SLD +L +++ +++ LR
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR- 154
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G A G++YL +H + A NIL+N +V D+GLS + PE G
Sbjct: 155 --GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+VL E++S G W + +IK +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKAVD 264
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 265 EGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 125/296 (42%), Gaps = 43/296 (14%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF---------G 105
E+DA S +++G G G V + L KL + K I + G+ G
Sbjct: 12 ELDATN--ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 106 FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRR 165
AS++ HPNI+ + G +IV+E + SLD +L +++ +++
Sbjct: 67 EASIMGQF---DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 123
Query: 166 LRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRG 222
LR G A G++YL +H + A NIL+N +V D+GLS + PE
Sbjct: 124 LR---GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 223 LAGYVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIK 276
G W T SDV+ +G+VL E++S G W + +IK
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIK 232
Query: 277 EMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
+ L P + P L ++ L C R NRP Q+ +IL+ L+ +P
Sbjct: 233 AVDEGYRLPPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 282
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 118/290 (40%), Gaps = 39/290 (13%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGK-LVAVKRIHPRLVLSNAG---------FGFAS 108
A + + + IG+G G V+ L K +VA+K L+L ++ F
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKS----LILGDSEGETEMIEKFQEFQR 72
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ +S HPNIV + G P +V EF+ L H D A + W+ +LR+
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRL 127
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILL-----NEKFCARVCDYGLSFLAPEEKRGL 223
A G+EY+ P I+H +++ NI L N CA+V D+ LS + GL
Sbjct: 128 MLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL 186
Query: 224 AGYVDDDYWHEKGGGNATRES-----DVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM 278
G W A ES D Y F ++L IL+G EG +++ IK +
Sbjct: 187 LGNFQ---WMAPETIGAEEESYTEKADTYSFAMILYTILTG----EGPFDEYSYGKIKFI 239
Query: 279 RFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
R IP + P RL V C K RP + L+ L
Sbjct: 240 NMIREEGLRPTIPEDCPP--RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 28/281 (9%)
Query: 64 SHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA------Q 117
+ +++IG G G VY +L T K + + AG+ + L A
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSS--GKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
H NI+ + G +I++E++ +LD +L E + S+L LR G A G++
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMK 161
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAGYVDDDYWHE 234
YL N +H + A NIL+N +V D+GLS + PE +G W
Sbjct: 162 YLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 235 KGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291
T SDV+ FG+V+ E+++ G W L + M+ ++ +P
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMT-----YGERPYWELSNHEVMK---AINDGFRLP 270
Query: 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
+ + ++ + C R RP + +IL+ L+ P
Sbjct: 271 TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P + IV+++ +SL +LH ++ + + IA A+G++YLH A +II
Sbjct: 101 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSII 153
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAP--------EEKRGLAGYVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + E+ G ++ + +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 241 TRESDVYGFGVVLLEILSGR 260
+ +SDVY FG+VL E+++G+
Sbjct: 214 SFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P + IV+++ +SL +LH ++ + + IA A+G++YLH A +II
Sbjct: 102 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSII 154
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAP--------EEKRGLAGYVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + E+ G ++ + +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 241 TRESDVYGFGVVLLEILSGR 260
+ +SDVY FG+VL E+++G+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQ 234
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P + IV+++ +SL +LH ++ + + IA A+G++YLH A +II
Sbjct: 74 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSII 126
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-----FLAPEEKRGLAG---YVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + + L+G ++ + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 241 TRESDVYGFGVVLLEILSGR 260
+ +SDVY FG+VL E+++G+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P + IV+++ +SL +LH ++ + + IA A+G++YLH A +II
Sbjct: 94 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSII 146
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-----FLAPEEKRGLAG---YVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + + L+G ++ + +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 241 TRESDVYGFGVVLLEILSGR 260
+ +SDVY FG+VL E+++G+
Sbjct: 207 SFQSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G GTVY VAVK ++ F + + L +H NI+ +G+S
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
P + IV+++ +SL +LH ++ + + IA A+G++YLH A +II
Sbjct: 102 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSII 154
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-----FLAPEEKRGLAG---YVDDDYWHEKGGGNA 240
H +K++NI L+E ++ D+GL+ + + L+G ++ + +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 241 TRESDVYGFGVVLLEILSGR 260
+ +SDVY FG+VL E+++G+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQ 234
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
EIDA+ ++IG G G V + L K+ + I + AG+ F S
Sbjct: 25 EIDASC--IKIEKVIGVGEFGEVCSGRL---KVPGKREICVAIKTLKAGYTDKQRRDFLS 79
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +I++E++ SLD +L +N+ +++ LR
Sbjct: 80 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR- 138
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G G++YL A +H + A NIL+N +V D+G+S + PE G
Sbjct: 139 --GIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+V+ E++S G W + +IK +
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS-----YGERPYWDMSNQDVIKAIE 248
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P + L ++ L C R +RP Q+ +L+ L+ +P
Sbjct: 249 EGYRLPPPMDCP------IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNP 295
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 124/293 (42%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
EIDA+ ++IG G G V + L K+ + I + AG+ F S
Sbjct: 10 EIDASC--IKIEKVIGVGEFGEVCSGRL---KVPGKREICVAIKTLKAGYTDKQRRDFLS 64
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +I++E++ SLD +L +N+ +++ LR
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR- 123
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G G++YL + +H + A NIL+N +V D+G+S + PE G
Sbjct: 124 --GIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+V+ E++S G W + +IK +
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS-----YGERPYWDMSNQDVIKAIE 233
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P + L ++ L C R +RP Q+ +L+ L+ +P
Sbjct: 234 EGYRLPPPMDCP------IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNP 280
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 124/293 (42%), Gaps = 37/293 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFAS 108
EIDA+ ++IG G G V + L K+ + I + AG+ F S
Sbjct: 4 EIDASC--IKIEKVIGVGEFGEVCSGRL---KVPGKREICVAIKTLKAGYTDKQRRDFLS 58
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ HPNI+ + G +I++E++ SLD +L +N+ +++ LR
Sbjct: 59 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR- 117
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G G++YL + +H + A NIL+N +V D+G+S + PE G
Sbjct: 118 --GIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP---LIKEMR 279
W T SDV+ +G+V+ E++S G W + +IK +
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS-----YGERPYWDMSNQDVIKAIE 227
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
L P + P + L ++ L C R +RP Q+ +L+ L+ +P
Sbjct: 228 EGYRLPPPMDCP------IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNP 274
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 119/294 (40%), Gaps = 58/294 (19%)
Query: 68 IIGQGRLGTVYAALLSTGKL---VAVKRIHPRLVLSNAGFGFASVIKTL-SLAQHPNIVP 123
+IG+G G V A + L A+KR+ + FA ++ L L HPNI+
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHEN------------NDGASLLDWNRRLRIATG 171
+LG + G + E+ +L +L ++ N AS L + L A
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 172 AARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDY 231
ARG++YL Q IH + A NIL+ E + A++ D+GLS RG YV
Sbjct: 148 VARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLS-------RGQEVYVKKTM 197
Query: 232 ------WHEKGGGN---ATRESDVYGFGVVLLEILS-------GRRCEEGLLVKWALPLI 275
W N T SDV+ +GV+L EI+S G C E L
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---------LY 248
Query: 276 KEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
+++ L+ L E+ L+R C RPS Q+ LN ++
Sbjct: 249 EKLPQGYRLEKPLNCDDEVYDLMR------QCWREKPYERPSFAQILVSLNRML 296
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 119/294 (40%), Gaps = 58/294 (19%)
Query: 68 IIGQGRLGTVYAALLSTGKL---VAVKRIHPRLVLSNAGFGFASVIKTL-SLAQHPNIVP 123
+IG+G G V A + L A+KR+ + FA ++ L L HPNI+
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHEN------------NDGASLLDWNRRLRIATG 171
+LG + G + E+ +L +L ++ N AS L + L A
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 172 AARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDY 231
ARG++YL Q IH + A NIL+ E + A++ D+GLS RG YV
Sbjct: 141 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLS-------RGQEVYVKKTM 190
Query: 232 ------WHEKGGGN---ATRESDVYGFGVVLLEILS-------GRRCEEGLLVKWALPLI 275
W N T SDV+ +GV+L EI+S G C E L
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---------LY 241
Query: 276 KEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
+++ L+ L E+ L+R C RPS Q+ LN ++
Sbjct: 242 EKLPQGYRLEKPLNCDDEVYDLMR------QCWREKPYERPSFAQILVSLNRML 289
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 119/294 (40%), Gaps = 58/294 (19%)
Query: 68 IIGQGRLGTVYAALLSTGKL---VAVKRIHPRLVLSNAGFGFASVIKTL-SLAQHPNIVP 123
+IG+G G V A + L A+KR+ + FA ++ L L HPNI+
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHEN------------NDGASLLDWNRRLRIATG 171
+LG + G + E+ +L +L ++ N AS L + L A
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 172 AARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDY 231
ARG++YL Q IH + A NIL+ E + A++ D+GLS RG YV
Sbjct: 151 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLS-------RGQEVYVKKTM 200
Query: 232 ------WHEKGGGN---ATRESDVYGFGVVLLEILS-------GRRCEEGLLVKWALPLI 275
W N T SDV+ +GV+L EI+S G C E L
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---------LY 251
Query: 276 KEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
+++ L+ L E+ L+R C RPS Q+ LN ++
Sbjct: 252 EKLPQGYRLEKPLNCDDEVYDLMR------QCWREKPYERPSFAQILVSLNRML 299
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLS 114
EI+A+ S R IG G GTVY VAVK + F + + L
Sbjct: 32 EIEASEVMLSTR--IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
+H NI+ +G+ IV+++ +SL +LH + + + IA A+
Sbjct: 88 KTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQ 143
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP--------EEKRGLAGY 226
G++YLH A NIIH +K++NI L+E ++ D+GL+ + E+ G +
Sbjct: 144 GMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 227 VDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
+ + + + +SDVY +G+VL E+++G
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 106 FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRR 165
F S + +HPNI+ + G +I++EF+ +LD +L N+ +++
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 123
Query: 166 LRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLA-----PEE 219
LR G A G+ YL + + +H + A NIL+N +V D+GLS FL P E
Sbjct: 124 LR---GIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE 177
Query: 220 KRGLAGYVDDDYWHEKGGG--NATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIK 276
L G + + + T SD + +G+V+ E++S G R + + + I+
Sbjct: 178 TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE 237
Query: 277 EMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
+ D RL P + L ++ L C R RP QV + L+ ++ +P
Sbjct: 238 Q-------DYRLPPPPDCP--TSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNP 284
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 33/291 (11%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALLS-TGKL---VAVKRIHPRLVLSNAG--FGFAS 108
EI+A+ + R+IG G G V + L GK VA+K + G AS
Sbjct: 18 EIEASC--ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEAS 75
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
++ HPNI+ + G +IV+E++ SLD +L +N+ +++ LR
Sbjct: 76 IMGQFD---HPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR- 131
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG 225
G + G++YL +H + A NIL+N +V D+GLS + PE G
Sbjct: 132 --GISAGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 186
Query: 226 YVDDDYWHEKGG---GNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFS 281
W T SDV+ +G+V+ E++S G R + + + ++E
Sbjct: 187 GKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEE---- 242
Query: 282 ELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
+P + L ++ L C R +RP ++ +L+ L+ +P
Sbjct: 243 -----GYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRNP 288
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 36/242 (14%)
Query: 106 FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRR 165
F S + +HPNI+ + G +I++EF+ +LD +L N+ +++
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 121
Query: 166 LRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG 225
LR G A G+ YL + + +H + A NIL+N +V D+GLS E
Sbjct: 122 LR---GIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS---- 171
Query: 226 YVDDDYWHEKGGG--------------NATRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
D Y GG T SD + +G+V+ E++S G R + +
Sbjct: 172 --DPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 229
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330
+ I++ D RL P + L ++ L C R RP QV + L+ ++
Sbjct: 230 VINAIEQ-------DYRLPPPPDCP--TSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 280
Query: 331 DP 332
+P
Sbjct: 281 NP 282
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 23/265 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ A + VAVK + P + A A+V+KTL QH +V +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL---QHDKLVKLHAVV 252
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
++ P I++EF+ SL +L +D S + + + A G+ ++ Q N
Sbjct: 253 TKEP--IYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NY 305
Query: 188 IHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEKGG---GNATRE 243
IH ++A+NIL++ ++ D+GL+ + E G W G+ T +
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 244 SDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKV 303
SDV+ FG++L+EI++ R P + L+ +P L +
Sbjct: 366 SDVWSFGILLMEIVTYGRI--------PYPGMSNPEVIRALERGYRMPRPENCPEELYNI 417
Query: 304 ALACVGNSRKNRPSIVQVATILNNL 328
+ C N + RP+ + ++L++
Sbjct: 418 MMRCWKNRPEERPTFEYIQSVLDDF 442
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 23/265 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ A + VAVK + P + A A+V+KTL QH +V +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL---QHDKLVKLHAVV 79
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
++ P I++EF+ SL +L +D S + + + A G+ ++ Q N
Sbjct: 80 TKEP--IYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NY 132
Query: 188 IHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEKGG---GNATRE 243
IH ++A+NIL++ ++ D+GL+ + E G W G+ T +
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 244 SDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKV 303
SDV+ FG++L+EI++ R P + L+ +P L +
Sbjct: 193 SDVWSFGILLMEIVTYGRI--------PYPGMSNPEVIRALERGYRMPRPENCPEELYNI 244
Query: 304 ALACVGNSRKNRPSIVQVATILNNL 328
+ C N + RP+ + ++L++
Sbjct: 245 MMRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
+G G+ G V+ + VAVK + P + A A+++KTL QH +V +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL---QHDKLVRLYAVV 77
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
I++E++ SL +L + G LL + + + A G+ Y+ + N I
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERK---NYI 132
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG----------- 237
H ++A+N+L++E ++ D+GL+ + D++Y +G
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIE----------DNEYTAREGAKFPIKWTAPEA 182
Query: 238 ---GNATRESDVYGFGVVLLEILS 258
G T +SDV+ FG++L EI++
Sbjct: 183 INFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 38/259 (14%)
Query: 85 GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GERIIVSEFIN 142
G + VK + R + F L + HPN++P+LG Q+P +++ ++
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202
SL LHE + ++D ++ ++ A ARG+ +LH + P I + + +++++E
Sbjct: 93 YGSLYNVLHEGTNF--VVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDED 149
Query: 203 FCARV--CDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
AR+ D SF +P A +V + +K R +D++ F V+L E+++
Sbjct: 150 MTARISMADVKFSFQSPGRMYAPA-WVAPEALQKKPEDTNRRSADMWSFAVLLWELVT-- 206
Query: 261 RCEEGLLVKWALPLIKEMRFSELLDP-----------RLAIPCEIKPLVRLAKVALACVG 309
+E+ F++L + R IP I P V +K+ C+
Sbjct: 207 ---------------REVPFADLSNMEIGMKVALEGLRPTIPPGISPHV--SKLMKICMN 249
Query: 310 NSRKNRPSIVQVATILNNL 328
RP + IL +
Sbjct: 250 EDPAKRPKFDMIVPILEKM 268
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 118/294 (40%), Gaps = 41/294 (13%)
Query: 53 LTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVK--RIHPRLVLSNAGFGFASVI 110
L EID A + IIG G G VY A G VAVK R P +S
Sbjct: 1 LLEIDFAE--LTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEA 57
Query: 111 KTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLL-DWNRRLRIA 169
K ++ +HPNI+ + G +V EF L+ L +L +W A
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------A 111
Query: 170 TGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF--------CARVCDYGLSFLAPEEKR 221
ARG+ YLH IIH +K+SNIL+ +K ++ D+G LA E R
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG---LAREWHR 168
Query: 222 GLAGYVDDDY-WHEKGGGNA---TRESDVYGFGVVLLEILSGR---RCEEGLLVKWALPL 274
Y W A ++ SDV+ +GV+L E+L+G R +GL V + + +
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM 228
Query: 275 IKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
K LA+P AK+ C +RPS + L +
Sbjct: 229 NK-----------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
+G G+ G V+ + VAVK + P + A A+++KTL QH +V +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL---QHDKLVRLYAVV 76
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
I++EF+ SL +L + G LL + + + A G+ Y+ + N I
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIER---KNYI 131
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG----------- 237
H ++A+N+L++E ++ D+GL+ + D++Y +G
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIE----------DNEYTAREGAKFPIKWTAPEA 181
Query: 238 ---GNATRESDVYGFGVVLLEILS 258
G T +S+V+ FG++L EI++
Sbjct: 182 INFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 35/280 (12%)
Query: 64 SHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+ + +G G+ G VY + L VAVK + + A+V+K + +HPN+V
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI---KHPNLV 70
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRLRIATGAARGLEYL 179
+LG I++EF+ +L YL E N A +L L +AT + +EYL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL 125
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYW---HEK 235
+ N IH + A N L+ E +V D+GLS + + AG W
Sbjct: 126 EK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 236 GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELL--DPRLAIP-- 291
+ +SDV+ FGV+L EI + P I + ELL D R+ P
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMS--------PYPGIDPSQVYELLEKDYRMERPEG 234
Query: 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGD 331
C K + ++ AC + +RPS ++ + +
Sbjct: 235 CPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQE 270
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 43/270 (15%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ A + VAVK + P + A A+V+KTL QH +V +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL---QHDKLVKLHAVV 246
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
++ P I++EF+ SL +L +D S + + + A G+ ++ Q N
Sbjct: 247 TKEP--IYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NY 299
Query: 188 IHGCIKASNILLNEKFCARVCDYGLS---------FLAPEEKRGLAGYVDDDYWHEKGGG 238
IH ++A+NIL++ ++ D+GL+ + APE G
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPE---------------AINFG 344
Query: 239 NATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLV 298
+ T +SDV+ FG++L+EI++ R P + L+ +P
Sbjct: 345 SFTIKSDVWSFGILLMEIVTYGRI--------PYPGMSNPEVIRALERGYRMPRPENCPE 396
Query: 299 RLAKVALACVGNSRKNRPSIVQVATILNNL 328
L + + C N + RP+ + ++L++
Sbjct: 397 ELYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 31/279 (11%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF------GFASVIKTLSLAQHPN 120
R+IG G G V + L KL + + + G+ F + HPN
Sbjct: 49 RVIGAGEFGEVCSGRL---KLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
+V + G +IV EF+ +LD +L +++ +++ LR G A G+ YL
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR---GIAAGMRYL- 161
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAGYVDDDYWHEKGG 237
+H + A NIL+N +V D+GLS + PE G W
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 238 ---GNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293
T SDV+ +G+V+ E++S G R + + + I+E +P
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE---------GYRLPAP 270
Query: 294 IKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
+ L ++ L C R RP Q+ IL+ ++ +P
Sbjct: 271 MDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIRNP 309
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 10 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 67
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 68 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 119
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 176
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 120/290 (41%), Gaps = 48/290 (16%)
Query: 67 RIIGQGRLGTVYAALLS-----TGKLVAVKRIH----PRLVLSNAGFGFASVIKTLSLAQ 117
R +G+G G V TG++VAVK + P+L G+ I+ L
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQL-----RSGWQREIEILRTLY 69
Query: 118 HPNIVPILGFSQAPGERII--VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARG 175
H +IV G + GE+ + V E++ + SL YL + G + L L A G
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEG 124
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YW 232
+ YLH A + IH + A N+LL+ ++ D+GL+ PE D D +W
Sbjct: 125 MAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 181
Query: 233 HEKGGGNATR---ESDVYGFGVVLLEILSGRRCEEGLLVKWALPL------IKEMRFSEL 283
+ + SDV+ FGV L E+L+ + K+ + + +R +EL
Sbjct: 182 YAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTEL 241
Query: 284 LD-----PRL-AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
L+ PR PCEI L++ C RP+ + IL
Sbjct: 242 LERGERLPRPDRCPCEIYHLMK------NCWETEASFRPTFQNLVPILQT 285
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 120/290 (41%), Gaps = 48/290 (16%)
Query: 67 RIIGQGRLGTVYAALLS-----TGKLVAVKRIH----PRLVLSNAGFGFASVIKTLSLAQ 117
R +G+G G V TG++VAVK + P+L G+ I+ L
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQL-----RSGWQREIEILRTLY 68
Query: 118 HPNIVPILGFSQAPGERII--VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARG 175
H +IV G + GE+ + V E++ + SL YL + G + L L A G
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEG 123
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YW 232
+ YLH A + IH + A N+LL+ ++ D+GL+ PE D D +W
Sbjct: 124 MAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 180
Query: 233 HEKGGGNATR---ESDVYGFGVVLLEILSGRRCEEGLLVKWALPL------IKEMRFSEL 283
+ + SDV+ FGV L E+L+ + K+ + + +R +EL
Sbjct: 181 YAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTEL 240
Query: 284 LD-----PRL-AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
L+ PR PCEI L++ C RP+ + IL
Sbjct: 241 LERGERLPRPDRCPCEIYHLMK------NCWETEASFRPTFQNLVPILQT 284
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 44/289 (15%)
Query: 67 RIIGQGRLGTVYAALLS-----TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
R +G+G G V TG++VAVK + + G+ I L H +I
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS-GWKQEIDILRTLYHEHI 78
Query: 122 VPILGFSQAPGERII--VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
+ G + GE+ + V E++ + SL YL ++ G + L L A G+ YL
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYL 133
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKG 236
H A + IH + A N+LL+ ++ D+GL+ PE D D +W+
Sbjct: 134 H---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 237 GGNATR---ESDVYGFGVVLLEILSGRRCEEGL--------LVKWALPLIKEMRFSELLD 285
+ SDV+ FGV L E+L+ C+ L+ A + +R +ELL+
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT--HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
Query: 286 -----PRL-AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
PR PCE+ L++ C RP+ + IL +
Sbjct: 249 RGERLPRPDKCPCEVYHLMK------NCWETEASFRPTFENLIPILKTV 291
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 5 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 63 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 114
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 10 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 67
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 68 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 119
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 117/278 (42%), Gaps = 31/278 (11%)
Query: 64 SHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+ + +G G+ G VY + L VAVK + + A+V+K + +HPN+V
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI---KHPNLV 91
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRLRIATGAARGLEYL 179
+LG IV+E++ +L YL E N A +L L +AT + +EYL
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL-----LYMATQISSAMEYL 146
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYW---HEK 235
+ N IH + A N L+ E +V D+GLS + + AG W
Sbjct: 147 EK---KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 203
Query: 236 GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDP--RLAIPCE 293
+ +SDV+ FGV+L EI + P I + +LL+ R+ P
Sbjct: 204 AYNTFSIKSDVWAFGVLLWEIATYGMS--------PYPGIDLSQVYDLLEKGYRMEQPEG 255
Query: 294 IKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGD 331
P ++ ++ AC S +RPS + + D
Sbjct: 256 CPP--KVYELMRACWKWSPADRPSFAETHQAFETMFHD 291
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 32/234 (13%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+ +GR G V+ A L + VAVK I P + + + +L +H NI+ +G
Sbjct: 30 EVKARGRFGCVWKAQL-LNEYVAVK-IFP--IQDKQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 127 FSQAPGERI-----IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
++ G + +++ F SL +L A+++ WN IA ARGL YLH+
Sbjct: 86 -AEKRGTSVDVDLWLITAFHEKGSLSDFLK-----ANVVSWNELCHIAETMARGLAYLHE 139
Query: 182 -------GVAPNIIHGCIKASNILLNEKFCARVCDYGLS--FLAPEEKRGLAGYVDDDYW 232
G P I H IK+ N+LL A + D+GL+ F A + G V +
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 233 HE----KGGGNATRES----DVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM 278
+G N R++ D+Y G+VL E+ S +G + ++ LP +E+
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 5 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 63 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 114
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 7 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 65 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 116
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 117 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 7 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 65 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 116
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 173
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 6 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 63
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 64 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 115
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 116 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 172
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 9 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 66
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 67 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 118
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 119 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 175
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 7 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 65 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 116
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 117 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 18 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 75
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 76 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 127
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 128 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 184
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 185 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 5 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 63 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----L 114
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 115 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 10 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 67
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 68 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----L 119
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 120 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 79
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E++N SL +L + L + + ++ A G+ Y+ + N
Sbjct: 80 SEEP--IYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L ++D+ W + G
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARL-----------IEDNEWTARQGAKFPIKWTAP 181
Query: 238 -----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 182 EAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 5 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 63 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----L 114
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 115 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 35/280 (12%)
Query: 64 SHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+ + +G G+ G VY + L VAVK + + A+V+K + +HPN+V
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI---KHPNLV 70
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRLRIATGAARGLEYL 179
+LG I++EF+ +L YL E N A +L L +AT + +EYL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL 125
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYW---HEK 235
+ N IH + A N L+ E +V D+GLS + + AG W
Sbjct: 126 EK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESL 182
Query: 236 GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELL--DPRLAIP-- 291
+ +SDV+ FGV+L EI + P I + ELL D R+ P
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMS--------PYPGIDPSQVYELLEKDYRMERPEG 234
Query: 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGD 331
C K + ++ AC + +RPS ++ + +
Sbjct: 235 CPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQE 270
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 10 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 67
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 68 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 119
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 120 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 67 RIIGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
R +G+G G+V Y L +TG++VAVK++ F I+ L QH NI
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNI 76
Query: 122 VPILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
V G + G R ++ EF+ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER---IDHIKLLQYTSQICKGMEYL 133
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKG 236
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 134 G---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 237 GGNATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 44/289 (15%)
Query: 67 RIIGQGRLGTVYAALLS-----TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
R +G+G G V TG++VAVK + + G+ I L H +I
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS-GWKQEIDILRTLYHEHI 78
Query: 122 VPILGFSQAPGERII--VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
+ G + GE+ + V E++ + SL YL ++ G + L L A G+ YL
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYL 133
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKG 236
H + + IH + A N+LL+ ++ D+GL+ PE D D +W+
Sbjct: 134 H---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 237 GGNATR---ESDVYGFGVVLLEILSGRRCEEGL--------LVKWALPLIKEMRFSELLD 285
+ SDV+ FGV L E+L+ C+ L+ A + +R +ELL+
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT--HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
Query: 286 -----PRL-AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
PR PCE+ L++ C RP+ + IL +
Sbjct: 249 RGERLPRPDKCPCEVYHLMK------NCWETEASFRPTFENLIPILKTV 291
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 117/280 (41%), Gaps = 35/280 (12%)
Query: 64 SHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+ + +G G+ G VY + L VAVK + + A+V+K + +HPN+V
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI---KHPNLV 70
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRLRIATGAARGLEYL 179
+LG I+ EF+ +L YL E N A +L L +AT + +EYL
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL 125
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYW---HEK 235
+ N IH + A N L+ E +V D+GLS + + AG W
Sbjct: 126 EK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 236 GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELL--DPRLAIP-- 291
+ +SDV+ FGV+L EI + P I + ELL D R+ P
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMS--------PYPGIDPSQVYELLEKDYRMERPEG 234
Query: 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGD 331
C K + ++ AC + +RPS ++ + +
Sbjct: 235 CPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQE 270
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 6 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 63
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I+ EF+ +L YL E N A +L L
Sbjct: 64 MKEI---KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----L 115
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 116 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 172
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 65 HRRIIGQGRLGT-VYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
H ++G+G G + TG+++ +K + F +K + +HPN++
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELI--RFDEETQRTFLKEVKVMRCLEHPNVLK 71
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+G ++E+I +L + + S W++R+ A A G+ YLH
Sbjct: 72 FIGVLYKDKRLNFITEYIKGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLH--- 125
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGY--------------VDD 229
+ NIIH + + N L+ E V D+GL+ L +EK G V +
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 230 DYWHEK---GGGNATRESDVYGFGVVLLEIL 257
YW G + + DV+ FG+VL EI+
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 5 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I+ EF+ +L YL E N A +L L
Sbjct: 63 MKEI---KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----L 114
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 115 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 10 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 67
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I+ EF+ +L YL E N A +L L
Sbjct: 68 MKEI---KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----L 119
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 5 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I+ EF+ +L YL E N A +L L
Sbjct: 63 MKEI---KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----L 114
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 115 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 118/292 (40%), Gaps = 57/292 (19%)
Query: 67 RIIGQGRLGTV-YAALLSTGKL---VAVKRIHPRLVLSNAGF------GFASVIKTLSLA 116
+IIG G G V Y L G+ VA+K + AG+ F S +
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-------KAGYTERQRRDFLSEASIMGQF 107
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNI+ + G +IV+E++ SLD +L ++ +++ LR G G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGM 164
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKG 236
YL +H + A N+L++ +V D+GLS + + D D +
Sbjct: 165 RYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED---------DPDAAYTTT 212
Query: 237 GGNA---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG + SDV+ FGVV+ E+L+ G R + + + ++E
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-- 270
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
+P + L ++ L C R RP Q+ ++L+ L+ P
Sbjct: 271 -------YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 66 RRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPI 124
+ +G G+ G VY + L VAVK + + A+V+K + +HPN+V +
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI---KHPNLVQL 281
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRLRIATGAARGLEYLHQ 181
LG I++EF+ +L YL E N A +L L +AT + +EYL +
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEK 336
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYW---HEKGG 237
N IH + A N L+ E +V D+GLS + + AG W
Sbjct: 337 ---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 393
Query: 238 GNATRESDVYGFGVVLLEILS 258
+ +SDV+ FGV+L EI +
Sbjct: 394 NKFSIKSDVWAFGVLLWEIAT 414
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 35/235 (14%)
Query: 68 IIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
I +GR G V+ A L VAVK I P + + I + +H N++ +
Sbjct: 22 IKARGRFGCVWKAQL-MNDFVAVK-IFP--LQDKQSWQSEREIFSTPGMKHENLLQFIAA 77
Query: 128 ----SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
S E +++ F + SL YL N ++ WN +A +RGL YLH+ V
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGN-----IITWNELCHVAETMSRGLSYLHEDV 132
Query: 184 --------APNIIHGCIKASNILLNEKFCARVCDYGLSFL-----APEEKRGLAG---YV 227
P+I H K+ N+LL A + D+GL+ P + G G Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 228 DDDYWHEKGGGNATRES----DVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM 278
+ +G N R++ D+Y G+VL E++S + +G + ++ LP +E+
Sbjct: 193 APEVL--EGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEI 245
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV 109
Y E++ H+ +G G+ G VY + L VAVK + + A+V
Sbjct: 209 YDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 266
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRL 166
+K + +HPN+V +LG I++EF+ +L YL E N A +L L
Sbjct: 267 MKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----L 318
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAG 225
+AT + +EYL + N IH + A N L+ E +V D+GLS + + AG
Sbjct: 319 YMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 375
Query: 226 YVDDDYW---HEKGGGNATRESDVYGFGVVLLEILS 258
W + +SDV+ FGV+L EI +
Sbjct: 376 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 23/264 (8%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VA+K + P + + A ++K L +H +V +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL---KHDKLVQLYAVV 73
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E++N SL +L + A L + +A A G+ Y+ + N
Sbjct: 74 SEEP--IYIVTEYMNKGSLLDFLKDGEGRA--LKLPNLVDMAAQVAAGMAYIERM---NY 126
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG---GNATRE 243
IH ++++NIL+ ++ D+GL+ L + E G W G T +
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 244 SDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKV 303
SDV+ FG++L E+++ R P + E ++ +PC + L ++
Sbjct: 187 SDVWSFGILLTELVTKGRV--------PYPGMNNREVLEQVERGYRMPCPQDCPISLHEL 238
Query: 304 ALACVGNSRKNRPSIVQVATILNN 327
+ C + RP+ + + L +
Sbjct: 239 MIHCWKKDPEERPTFEYLQSFLED 262
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 33/277 (11%)
Query: 66 RRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPI 124
+ +G G+ G VY + L VAVK + + A+V+K + +HPN+V +
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI---KHPNLVQL 320
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDWNRRLRIATGAARGLEYLHQ 181
LG I++EF+ +L YL E N A +L L +AT + +EYL +
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEK 375
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYW---HEKGG 237
N IH + A N L+ E +V D+GLS + + AG W
Sbjct: 376 ---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 432
Query: 238 GNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP--CEI 294
+ +SDV+ FGV+L EI + G G+ + L+++ D R+ P C
Sbjct: 433 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-------DYRMERPEGCPE 485
Query: 295 KPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGD 331
K + ++ AC + +RPS ++ + +
Sbjct: 486 K----VYELMRACWQWNPSDRPSFAEIHQAFETMFQE 518
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 10/212 (4%)
Query: 52 PLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASV 109
PL A + F R +G+G+ G VY A K + ++ + L AG
Sbjct: 2 PLGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIA 169
++ S +HPNI+ + G+ ++ E+ + ++ + S D R
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYI 117
Query: 170 TGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVD 228
T A L Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLD 174
Query: 229 DDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 57/294 (19%)
Query: 69 IGQGRLGTV----YAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG LVAVK++ + + F I+ L IV
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 124 ILGFSQAPGERII--VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G S PG + + V E++ L +L + + LD +R L ++ +G+EYL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLG- 144
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA- 240
+ +H + A NIL+ + ++ D+GL+ L P +D DY+ + G +
Sbjct: 145 --SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---------LDKDYYVVREPGQSP 193
Query: 241 --------------TRESDVYGFGVVLLEILS--GRRCEEG------LLVKWALPLIKEM 278
+R+SDV+ FGVVL E+ + + C + + +P + +
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253
Query: 279 RFSELLDPRL----AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
RL A P E+ L++L C S ++RPS + L+ L
Sbjct: 254 LELLEEGQRLPAPPACPAEVHELMKL------CWAPSPQDRPSFSALGPQLDML 301
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 39/283 (13%)
Query: 67 RIIGQGRLGTV-YAALLSTGKL---VAVKRIHPRLVLSNAGF------GFASVIKTLSLA 116
+IIG G G V Y L G+ VA+K + AG+ F S +
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-------KAGYTERQRRDFLSEASIMGQF 107
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNI+ + G +IV+E++ SLD +L ++ +++ LR G G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGM 164
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAGYVDDDYWH 233
YL +H + A N+L++ +V D+GLS + P+ G W
Sbjct: 165 RYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT 221
Query: 234 EKGG---GNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289
+ SDV+ FGVV+ E+L+ G R + + + ++E
Sbjct: 222 APEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG---------YR 272
Query: 290 IPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
+P + L ++ L C R RP Q+ ++L+ L+ P
Sbjct: 273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 57/294 (19%)
Query: 69 IGQGRLGTV----YAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG LVAVK++ + + F I+ L IV
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 124 ILGFSQAPGERII--VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G S PG + + V E++ L +L + + LD +R L ++ +G+EYL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLG- 131
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA- 240
+ +H + A NIL+ + ++ D+GL+ L P +D DY+ + G +
Sbjct: 132 --SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---------LDKDYYVVREPGQSP 180
Query: 241 --------------TRESDVYGFGVVLLEILS--GRRCEEG------LLVKWALPLIKEM 278
+R+SDV+ FGVVL E+ + + C + + +P + +
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRL 240
Query: 279 RFSELLDPRL----AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
RL A P E+ L++L C S ++RPS + L+ L
Sbjct: 241 LELLEEGQRLPAPPACPAEVHELMKL------CWAPSPQDRPSFSALGPQLDML 288
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 78
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL + A +D + L+ + +G+EYL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH---AERIDHIKLLQYTSQICKGMEYLG- 134
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 135 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 79
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E++N SL +L + L + + ++ A G+ Y+ + N
Sbjct: 80 SEEP--IYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 182
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 74
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 130
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 131 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 73
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 129
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 130 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 75
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 131
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 132 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 75
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 131
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 132 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 79
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 135
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 136 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 27/219 (12%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ---HPNIVPIL 125
+G+G G VY A S G++VA+KRI RL + G ++ I+ +SL + HPNIV ++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI--RLDAEDEGIP-STAIREISLLKELHHPNIVSLI 85
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
+ +V EF+ L L EN G L D ++ + RG+ + HQ
Sbjct: 86 DVIHSERCLTLVFEFME-KDLKKVLDENKTG--LQDSQIKIYLYQ-LLRGVAHCHQH--- 138
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGL--SFLAPEEKRGLAGYVDD--DYWHEK-----G 236
I+H +K N+L+N ++ D+GL +F P + Y + W+ G
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIP-----VRSYTHEVVTLWYRAPDVLMG 193
Query: 237 GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI 275
+ D++ G + E+++G+ G+ LP I
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 27/219 (12%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ---HPNIVPIL 125
+G+G G VY A S G++VA+KRI RL + G ++ I+ +SL + HPNIV ++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI--RLDAEDEGIP-STAIREISLLKELHHPNIVSLI 85
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
+ +V EF+ L L EN G L D ++ + RG+ + HQ
Sbjct: 86 DVIHSERCLTLVFEFME-KDLKKVLDENKTG--LQDSQIKIYLYQ-LLRGVAHCHQH--- 138
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGL--SFLAPEEKRGLAGYVDD--DYWHEK-----G 236
I+H +K N+L+N ++ D+GL +F P + Y + W+ G
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIP-----VRSYTHEVVTLWYRAPDVLMG 193
Query: 237 GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI 275
+ D++ G + E+++G+ G+ LP I
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKI 232
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 75
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 131
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 132 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 81
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 137
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 138 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 78
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 134
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 135 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 80
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 136
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 137 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 93
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 149
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 150 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 106
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 162
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 163 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 57/294 (19%)
Query: 69 IGQGRLGTV----YAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG LVAVK++ + + F I+ L IV
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 124 ILGFSQAPGERII--VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G S PG + + V E++ L +L + + LD +R L ++ +G+EYL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLG- 132
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA- 240
+ +H + A NIL+ + ++ D+GL+ L P +D DY+ + G +
Sbjct: 133 --SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---------LDKDYYVVREPGQSP 181
Query: 241 --------------TRESDVYGFGVVLLEILS--GRRCEEG------LLVKWALPLIKEM 278
+R+SDV+ FGVVL E+ + + C + + +P + +
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRL 241
Query: 279 RFSELLDPRL----AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
RL A P E+ L++L C S ++RPS + L+ L
Sbjct: 242 LELLEEGQRLPAPPACPAEVHELMKL------CWAPSPQDRPSFSALGPQLDML 289
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 126
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXI 183
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 184 EGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 122 SYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI 178
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 93
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLG- 149
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 150 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 92 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 138
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R EGL+ + L E
Sbjct: 196 GTAQYVSPELLTEK---SAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL--E 250
Query: 278 MRFSELLDPRLAIPCEIKPLVRLAKVALAC 307
F E P+ E K LV A L C
Sbjct: 251 YDFPEKFFPKARDLVE-KLLVLDATKRLGC 279
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 76
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG- 132
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 133 --TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 72
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 73 SEEP--IXIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 125
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG---GNATRE 243
+H ++A+NIL+ E +V D+GL+ L + E G W G T +
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 244 SDVYGFGVVLLEILSGRR 261
SDV+ FG++L E+ + R
Sbjct: 186 SDVWSFGILLTELTTKGR 203
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 69 IGQGRLGTV----YAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG++VAVK++ F I+ L QH NIV
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVK 82
Query: 124 ILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G + G R ++ E++ SL YL ++ + +D + L+ + +G+EYL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLG- 138
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWHEKGGG 238
IH + NIL+ + ++ D+GL+ + P++K + +W+
Sbjct: 139 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 239 NATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGVVL E+ +
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 52 PLTEIDAATDGFSHR-----RIIGQGRLGTVYAALL-----STGKLVAVKRIHPRLVLSN 101
P TE+D F R R +G+G G V +TG+ VAVK + P +
Sbjct: 9 PATEVDPTH--FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKP----ES 62
Query: 102 AGFGFASVIKTLSLAQ---HPNIVPILGFSQAPGERII--VSEFINMASLDFYLHENNDG 156
G A + K + + + H NIV G G I + EF+ SL YL +N +
Sbjct: 63 GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK 122
Query: 157 ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
+L ++L+ A +G++YL + +H + A N+L+ + ++ D+GL+
Sbjct: 123 INL---KQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176
Query: 217 PEEKRGLAGYVDDD---YWHEKGGGNATR---ESDVYGFGVVLLEILS 258
+K D D +W+ ++ SDV+ FGV L E+L+
Sbjct: 177 ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 75
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 76 SEEP--IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 128
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 178
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 124
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI 181
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI 178
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 38/256 (14%)
Query: 85 GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GERIIVSEFIN 142
G + VK + R + F L + HPN++P+LG Q+P +++ +
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202
SL LHE + ++D ++ ++ A ARG +LH + P I + + ++ ++E
Sbjct: 93 YGSLYNVLHEGTN--FVVDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNSRSVXIDED 149
Query: 203 FCARV--CDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
AR+ D SF +P A +V + +K R +D + F V+L E+++
Sbjct: 150 XTARISXADVKFSFQSPGRXYAPA-WVAPEALQKKPEDTNRRSADXWSFAVLLWELVT-- 206
Query: 261 RCEEGLLVKWALPLIKEMRFSELLDP-----------RLAIPCEIKPLVRLAKVALACVG 309
+E+ F++L + R IP I P V +K+ C
Sbjct: 207 ---------------REVPFADLSNXEIGXKVALEGLRPTIPPGISPHV--SKLXKICXN 249
Query: 310 NSRKNRPSIVQVATIL 325
RP + IL
Sbjct: 250 EDPAKRPKFDXIVPIL 265
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 81
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 133
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 134 LRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 147
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 148 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMI 204
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 122
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG-LAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMI 179
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 122
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 179
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 125/330 (37%), Gaps = 67/330 (20%)
Query: 37 ESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAV 90
E E LP + +P D + +G+G G V A +T + VAV
Sbjct: 1 EHAERLPYDASKWEFP-------RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 53
Query: 91 KRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFY 149
K + S + + + + H N+V +LG PG ++++EF +L Y
Sbjct: 54 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTY 113
Query: 150 LHENNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNI 197
L + L + + A+G+E+L + IH + A NI
Sbjct: 114 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 170
Query: 198 LLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGN---------------ATR 242
LL+EK ++CD+GL+ R + Y D DY KG T
Sbjct: 171 LLSEKNVVKICDFGLA-------RDI--YKDPDY-VRKGDARLPLKWMAPETIFDRVYTI 220
Query: 243 ESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEIKPLVR 299
+SDV+ FGV+L EI S L P +K + F L R+ P P
Sbjct: 221 QSDVWSFGVLLWEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--E 270
Query: 300 LAKVALACVGNSRKNRPSIVQVATILNNLV 329
+ + L C RP+ ++ L NL+
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 147
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 148 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 204
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 120
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 121 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 177
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 178 EGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG-LAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMI 178
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 178
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 92 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 138
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R EGL+ + L E
Sbjct: 196 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL--E 250
Query: 278 MRFSELLDPRLAIPCEIKPLVRLAKVALAC 307
F E P+ E K LV A L C
Sbjct: 251 YDFPEKFFPKARDLVE-KLLVLDATKRLGC 279
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 126
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 183
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 124
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG-LAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMI 178
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 81
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 133
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 134 LRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILLAFRHE 83
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 135
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 136 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMI 178
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 81
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 133
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 134 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 71
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 72 SEEP--IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 124
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 174
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMI 181
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+ IG+G G V G VAVK I + A ASV+ L +H N+V +LG
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQL---RHSNLVQLLG 66
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
+ G IV+E++ SL YL G S+L + L+ + +EYL
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLE---GN 121
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK---RGLAGYVDDDYWHEKGGGNATR 242
N +H + A N+L++E A+V D+GL+ A + + + + EK +
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK---KFST 178
Query: 243 ESDVYGFGVVLLEILSGRR 261
+SDV+ FG++L EI S R
Sbjct: 179 KSDVWSFGILLWEIYSFGR 197
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 138
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 139 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 195
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 73
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 74 SEEP--IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 126
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 176
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYXQRTLREIKILLRFRHE 85
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 137
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 138 LRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 123
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 124 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMI 180
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 126
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 183
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 40/287 (13%)
Query: 67 RIIGQGRLGTVYAALLS-----TGKLVAVKRIHPRLVLSNAG----FGFASVIKTLSLAQ 117
R +G+G G V TG++VAVK + ++AG G+ I L
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-----ADAGPQHRSGWKQEIDILRTLY 91
Query: 118 HPNIVPILGFSQAPG--ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARG 175
H +I+ G + G +V E++ + SL YL ++ G + L L A G
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEG 146
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YW 232
+ YLH A + IH + A N+LL+ ++ D+GL+ PE D D +W
Sbjct: 147 MAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFW 203
Query: 233 HEKGGGNATR---ESDVYGFGVVLLEILSGRRCEEGL--------LVKWALPLIKEMRFS 281
+ + SDV+ FGV L E+L+ C+ L+ A + +R +
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELLT--HCDSSQSPPTKFLELIGIAQGQMTVLRLT 261
Query: 282 ELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
ELL+ +P K + + C RP+ + IL +
Sbjct: 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+ IG+G G V G VAVK I + A ASV+ L +H N+V +LG
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQL---RHSNLVQLLG 253
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
+ G IV+E++ SL YL G S+L + L+ + +EYL
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLE---GN 308
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK---RGLAGYVDDDYWHEKGGGNATR 242
N +H + A N+L++E A+V D+GL+ A + + + + EK +
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK---KFST 365
Query: 243 ESDVYGFGVVLLEILSGRR 261
+SDV+ FG++L EI S R
Sbjct: 366 KSDVWSFGILLWEIYSFGR 384
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 124/323 (38%), Gaps = 63/323 (19%)
Query: 40 ETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAVKRI 93
E LP + +P ++ + +G+G G V A +T + VAVK +
Sbjct: 13 ERLPYDASKWEFPRDRLNLG-------KPLGRGAFGQVIEADAFGIDKTATXRTVAVKML 65
Query: 94 HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFYLHE 152
S + + + + H N+V +LG PG +++ EF +L YL
Sbjct: 66 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 153 NNDG--------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFC 204
+ L + + A+G+E+L + IH + A NILL+EK
Sbjct: 126 KRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV 182
Query: 205 ARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGN---------------ATRESDVYGF 249
++CD+GL+ R + Y D DY KG T +SDV+ F
Sbjct: 183 VKICDFGLA-------RDI--YKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 232
Query: 250 GVVLLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEIKPLVRLAKVALA 306
GV+L EI S L P +K + F L R+ P P + + L
Sbjct: 233 GVLLWEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLD 282
Query: 307 CVGNSRKNRPSIVQVATILNNLV 329
C RP+ ++ L NL+
Sbjct: 283 CWHGEPSQRPTFSELVEHLGNLL 305
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 83
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 135
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 136 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 125
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 182
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 17/196 (8%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+ IG+G G V G VAVK I + A ASV+ L +H N+V +LG
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQL---RHSNLVQLLG 81
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
+ G IV+E++ SL YL G S+L + L+ + +EYL
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLE---GN 136
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK---RGLAGYVDDDYWHEKGGGNATR 242
N +H + A N+L++E A+V D+GL+ A + + + + EK +
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK---KFST 193
Query: 243 ESDVYGFGVVLLEILS 258
+SDV+ FG++L EI S
Sbjct: 194 KSDVWSFGILLWEIYS 209
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 82
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 83 SEEP--IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 185
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILLAFRHE 83
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 135
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 136 LRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 85
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 137
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 138 LRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 248
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 249 SEEP--IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 351
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 248
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 249 SEEP--IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 351
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 101
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 153
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 154 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 120/287 (41%), Gaps = 48/287 (16%)
Query: 67 RIIGQGRLGTVYAALL----STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+++G G GTVY + T K+ +I A F ++ HP++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENND--GASLLDWNRRLRIATGAARGLEYLH 180
+LG +P ++ V++ + L Y+HE+ D G+ LL L A+G+ YL
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLL-----LNWCVQIAKGMMYLE 134
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG-- 238
+ ++H + A N+L+ ++ D+GL+ R L G D+ ++ GG
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLA-------RLLEG--DEKEYNADGGKMP 182
Query: 239 ------------NATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD 285
T +SDV+ +GV + E+++ G + +G+ + +LL+
Sbjct: 183 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---------EIPDLLE 233
Query: 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
+P + + V + C +RP ++A + + DP
Sbjct: 234 KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 280
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 89
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 141
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 142 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 81
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 133
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 134 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 122
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L+G +D
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMI 179
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 118
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 119 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 175
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 176 EGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 79
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 80 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 132
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG---GNATRE 243
IH ++A+NIL+++ ++ D+GL+ L + E G W G T +
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 244 SDVYGFGVVLLEILSGRR 261
SDV+ FG++L EI++ R
Sbjct: 193 SDVWSFGILLTEIVTHGR 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 77
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 78 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG---GNATRE 243
IH ++A+NIL+++ ++ D+GL+ L + E G W G T +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 244 SDVYGFGVVLLEILSGRR 261
SDV+ FG++L EI++ R
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 52 PLTEIDAATDGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVI 110
P +I + F +++G+G G V+ A T + A+K + +VL + V
Sbjct: 9 PSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVE 68
Query: 111 K-TLSLA-QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
K LSLA +HP + + Q V E++N L +++ D +R
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ----SCHKFDLSRATFY 124
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL---SFLAPEEKRGLAG 225
A GL++LH + I++ +K NILL++ ++ D+G+ + L + G
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCG 181
Query: 226 YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
D G D + FGV+L E+L G+
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 83
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 84 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG---GNATRE 243
IH ++A+NIL+++ ++ D+GL+ L + E G W G T +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 244 SDVYGFGVVLLEILSGRR 261
SDV+ FG++L EI++ R
Sbjct: 197 SDVWSFGILLTEIVTHGR 214
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 85
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQ--------I 137
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 138 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 120/287 (41%), Gaps = 48/287 (16%)
Query: 67 RIIGQGRLGTVYAALL----STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+++G G GTVY + T K+ +I A F ++ HP++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENND--GASLLDWNRRLRIATGAARGLEYLH 180
+LG +P ++ V++ + L Y+HE+ D G+ LL L A+G+ YL
Sbjct: 104 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLL-----LNWCVQIAKGMMYLE 157
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG-- 238
+ ++H + A N+L+ ++ D+GL+ R L G D+ ++ GG
Sbjct: 158 ER---RLVHRDLAARNVLVKSPNHVKITDFGLA-------RLLEG--DEKEYNADGGKMP 205
Query: 239 ------------NATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD 285
T +SDV+ +GV + E+++ G + +G+ + +LL+
Sbjct: 206 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---------EIPDLLE 256
Query: 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
+P + + V + C +RP ++A + + DP
Sbjct: 257 KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 303
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 125/330 (37%), Gaps = 67/330 (20%)
Query: 37 ESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAV 90
E E LP + +P D + +G+G G V A +T + VAV
Sbjct: 1 EHCERLPYDASKWEFP-------RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 53
Query: 91 KRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFY 149
K + S + + + + H N+V +LG PG ++++EF +L Y
Sbjct: 54 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTY 113
Query: 150 LHENNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNI 197
L + L + + A+G+E+L + IH + A NI
Sbjct: 114 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 170
Query: 198 LLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGN---------------ATR 242
LL+EK ++CD+GL+ R + Y D DY KG T
Sbjct: 171 LLSEKNVVKICDFGLA-------RDI--YKDPDY-VRKGDARLPLKWMAPETIFDRVYTI 220
Query: 243 ESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEIKPLVR 299
+SDV+ FGV+L EI S L P +K + F L R+ P P
Sbjct: 221 QSDVWSFGVLLWEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--E 270
Query: 300 LAKVALACVGNSRKNRPSIVQVATILNNLV 329
+ + L C RP+ ++ L NL+
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 79
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 131
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 132 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 78
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 79 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 131
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG---GNATRE 243
IH ++A+NIL+++ ++ D+GL+ L + E G W G T +
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 244 SDVYGFGVVLLEILSGRR 261
SDV+ FG++L EI++ R
Sbjct: 192 SDVWSFGILLTEIVTHGR 209
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 79
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 131
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 132 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 86
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 87 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 139
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG---GNATRE 243
IH ++A+NIL+++ ++ D+GL+ L + E G W G T +
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 244 SDVYGFGVVLLEILSGRR 261
SDV+ FG++L EI++ R
Sbjct: 200 SDVWSFGILLTEIVTHGR 217
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 73
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 74 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 126
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
IH ++A+NIL+++ ++ D+GL+ L D++Y +G
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIE----------DNEYTAREGAKFPIKWTAPE 176
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L EI++ R
Sbjct: 177 AINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 77
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 78 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG---GNATRE 243
IH ++A+NIL+++ ++ D+GL+ L + E G W G T +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 244 SDVYGFGVVLLEILSGRR 261
SDV+ FG++L EI++ R
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 77
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 78 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
IH ++A+NIL+++ ++ D+GL+ L D++Y +G
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIE----------DNEYTAREGAKFPIKWTAPE 180
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L EI++ R
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 83
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 84 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
IH ++A+NIL+++ ++ D+GL+ L D++Y +G
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIE----------DNEYTAREGAKFPIKWTAPE 186
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L EI++ R
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 82
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 83 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 135
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
IH ++A+NIL+++ ++ D+GL+ L D++Y +G
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIE----------DNEYTAREGAKFPIKWTAPE 185
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L EI++ R
Sbjct: 186 AINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 86
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 138
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 139 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 87
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 139
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 140 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+ IG+G G V G VAVK I + A ASV+ L +H N+V +LG
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQL---RHSNLVQLLG 72
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
+ G IV+E++ SL YL G S+L + L+ + +EYL
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLE---GN 127
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS---------------FLAPEEKRGLAGYVDDD 230
N +H + A N+L++E A+V D+GL+ + APE R A
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAA------ 181
Query: 231 YWHEKGGGNATRESDVYGFGVVLLEILSGRR 261
+ +SDV+ FG++L EI S R
Sbjct: 182 ---------FSTKSDVWSFGILLWEIYSFGR 203
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 78
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 130
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 131 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 84/202 (41%), Gaps = 25/202 (12%)
Query: 69 IGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G V++ L + LVAVK L + F + L HPNIV ++G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIAT------GAARGLEYLHQ 181
IV E + DF +GA RLR+ T AA G+EYL
Sbjct: 181 CTQKQPIYIVMELVQGG--DFLTFLRTEGA-------RLRVKTLLQMVGDAAAGMEYLES 231
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDD--DYWHEKGGGN 239
IH + A N L+ EK ++ D+G+S + +G + W N
Sbjct: 232 KCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 240 ATR---ESDVYGFGVVLLEILS 258
R ESDV+ FG++L E S
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 85
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 137
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 138 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 85
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 86 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 138
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG---GNATRE 243
IH ++A+NIL+++ ++ D+GL+ L + E G W G T +
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 244 SDVYGFGVVLLEILSGRR 261
SDV+ FG++L EI++ R
Sbjct: 199 SDVWSFGILLTEIVTHGR 216
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLSTGK-LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
D + + +IG G V AA + K VA+KRI+ ++ I+ +S HP
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHP 68
Query: 120 NIVPILGFSQAPGERIIVSEFINMAS-LDFYLH---ENNDGASLLDWNRRLRIATGAARG 175
NIV E +V + ++ S LD H + + +LD + I G
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAP----EEKRGLAGYVDDD 230
LEYLH+ IH +KA NILL E ++ D+G+S FLA + +V
Sbjct: 129 LEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 231 YWHEKGGGNATR----ESDVYGFGVVLLEILSG 259
W R ++D++ FG+ +E+ +G
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLSTGK-LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
D + + +IG G V AA + K VA+KRI+ ++ I+ +S HP
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHP 73
Query: 120 NIVPILGFSQAPGERIIVSEFINMAS-LDFYLH---ENNDGASLLDWNRRLRIATGAARG 175
NIV E +V + ++ S LD H + + +LD + I G
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAP----EEKRGLAGYVDDD 230
LEYLH+ IH +KA NILL E ++ D+G+S FLA + +V
Sbjct: 134 LEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 231 YWHEKGGGNATR----ESDVYGFGVVLLEILSG 259
W R ++D++ FG+ +E+ +G
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 116/282 (41%), Gaps = 50/282 (17%)
Query: 66 RRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
++G+G G V A K VA+K+I + F ++ LS HPNIV +
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLY 67
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRLRIATGAARGLEYLHQG 182
G P +V E+ SL LH GA L + + ++G+ YLH
Sbjct: 68 GACLNP--VCLVMEYAEGGSLYNVLH----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 183 VAPNIIHGCIKASNILLNEKFCA-RVCDYGLSF---LAPEEKRGLAGYVDDDYWHEKGGG 238
+IH +K N+LL ++CD+G + +G A ++ + + G
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE---GS 178
Query: 239 NATRESDVYGFGVVLLEILSGRRCEE-----GLLVKWAL------PLIKEMRFSELLDPR 287
N + + DV+ +G++L E+++ R+ + + WA+ PLIK +
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLP-------- 230
Query: 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
KP+ L C RPS+ ++ I+ +L+
Sbjct: 231 -------KPIESLMT---RCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 72
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 73 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 125
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
IH ++A+NIL+++ ++ D+GL+ L D++Y +G
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIE----------DNEYTAREGAKFPIKWTAPE 175
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L EI++ R
Sbjct: 176 AINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 87
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 88 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 140
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
IH ++A+NIL+++ ++ D+GL+ L D++Y +G
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIE----------DNEYTAREGAKFPIKWTAPE 190
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L EI++ R
Sbjct: 191 AINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 37/209 (17%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 331
Query: 128 SQAPGERIIVSEFINMASL-DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186
S+ P IV+E+++ SL DF E L + + +A A G+ Y+ + N
Sbjct: 332 SEEP--IYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERM---N 383
Query: 187 IIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG--------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAP 433
Query: 238 -----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 434 EAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 82
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 83 SEEP--IYIVCEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 185
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 111/250 (44%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 92 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNGC-LLKYIRKIGSFDETCTRFYT 138
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A++ SD++ G ++ ++++G R E L+ + + L E
Sbjct: 196 GTAQYVSPELLTEK---SASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 250
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 251 YDFPEKFFPK 260
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 24/233 (10%)
Query: 60 TDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASV--IKTLSLA 116
+ F + ++G+G G V +A TG++VA+K+I P F ++ IK L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP---FDKPLFALRTLREIKILKHF 66
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+H NI+ I + +I + LH L D + + I R +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-TLRAV 125
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----------EKRGLAGY 226
+ LH N+IH +K SN+L+N +VCD+GL+ + E ++ G+ Y
Sbjct: 126 KVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 227 VDDDYWHEK----GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI 275
V ++ +R DV+ G +L E+ R G + L LI
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K + +H +V +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKI---RHEKLVQLYAVV 82
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 83 SEEP--IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 185
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 116/282 (41%), Gaps = 50/282 (17%)
Query: 66 RRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
++G+G G V A K VA+K+I + F ++ LS HPNIV +
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLY 68
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRLRIATGAARGLEYLHQG 182
G P +V E+ SL LH GA L + + ++G+ YLH
Sbjct: 69 GACLNP--VCLVMEYAEGGSLYNVLH----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 122
Query: 183 VAPNIIHGCIKASNILLNEKFCA-RVCDYGLSF---LAPEEKRGLAGYVDDDYWHEKGGG 238
+IH +K N+LL ++CD+G + +G A ++ + + G
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE---GS 179
Query: 239 NATRESDVYGFGVVLLEILSGRRCEE-----GLLVKWAL------PLIKEMRFSELLDPR 287
N + + DV+ +G++L E+++ R+ + + WA+ PLIK +
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLP-------- 231
Query: 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
KP+ L C RPS+ ++ I+ +L+
Sbjct: 232 -------KPIESLMT---RCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 84/202 (41%), Gaps = 25/202 (12%)
Query: 69 IGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G V++ L + LVAVK L + F + L HPNIV ++G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIAT------GAARGLEYLHQ 181
IV E + DF +GA RLR+ T AA G+EYL
Sbjct: 181 CTQKQPIYIVMELVQGG--DFLTFLRTEGA-------RLRVKTLLQMVGDAAAGMEYLES 231
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDD--DYWHEKGGGN 239
IH + A N L+ EK ++ D+G+S + +G + W N
Sbjct: 232 KCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 240 ATR---ESDVYGFGVVLLEILS 258
R ESDV+ FG++L E S
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 39/285 (13%)
Query: 69 IGQGRLGTV----YAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G G+V Y L +TG LVAVK++ + + F I+ L IV
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 124 ILGFSQAPG--ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
G S PG E +V E++ L +L + + LD +R L ++ +G+EYL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLG- 128
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWH--EKG 236
+ +H + A NIL+ + ++ D+GL+ L P +K +W+ E
Sbjct: 129 --SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 237 GGNA-TRESDVYGFGVVLLEILS--GRRCEEG------LLVKWALPLIKEMRFSELLDPR 287
N +R+SDV+ FGVVL E+ + + C + + +P + + R
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQR 246
Query: 288 L----AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
L A P E+ L++L C S ++RPS + L+ L
Sbjct: 247 LPAPPACPAEVHELMKL------CWAPSPQDRPSFSALGPQLDML 285
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRI----HPRLVLSNAGFGFASVIKTLSLAQ 117
++ IGQG GTVY A+ ++TG+ VA++++ P+ L + I + +
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL------IINEILVMRENK 76
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
+PNIV L E +V E++ SL + E + +D + + + LE
Sbjct: 77 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALE 131
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG 237
+LH +IH IK+ NILL ++ D+G E+ + V YW
Sbjct: 132 FLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM--AP 186
Query: 238 GNATRES-----DVYGFGVVLLEILSGR 260
TR++ D++ G++ +E++ G
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G G+ G V+ + VAVK + + +A A+++K L QH +V +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV 77
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+Q P I++E++ SL +L L N+ L +A A G+ ++ + N
Sbjct: 78 TQEP--IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG---GNATRE 243
IH ++A+NIL+++ ++ D+GL+ L + E G W G T +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 244 SDVYGFGVVLLEILSGRR 261
SDV+ FG++L EI++ R
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 248
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 249 SEEP--IYIVGEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 351
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 82
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 83 SEEP--IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H + A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 185
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRI----HPRLVLSNAGFGFASVIKTLSLAQ 117
++ IGQG GTVY A+ ++TG+ VA++++ P+ L + I + +
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL------IINEILVMRENK 75
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
+PNIV L E +V E++ SL + E + +D + + + LE
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALE 130
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG 237
+LH +IH IK+ NILL ++ D+G E+ + V YW
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM--AP 185
Query: 238 GNATRES-----DVYGFGVVLLEILSGR 260
TR++ D++ G++ +E++ G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 69 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 115
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 116 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 173 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 227
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 228 YDFPEKFFPK 237
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 52 PLTEIDAATDGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVI 110
P +I + F +++G+G G V+ A T + A+K + +VL + V
Sbjct: 8 PSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVE 67
Query: 111 K-TLSLA-QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
K LSLA +HP + + Q V E++N L +++ D +R
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ----SCHKFDLSRATFY 123
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL---SFLAPEEKRGLAG 225
A GL++LH + I++ +K NILL++ ++ D+G+ + L + G
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCG 180
Query: 226 YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
D G D + FGV+L E+L G+
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ S D R T A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANAL 126
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 183
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRI----HPRLVLSNAGFGFASVIKTLSLAQ 117
++ IGQG GTVY A+ ++TG+ VA++++ P+ L + I + +
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL------IINEILVMRENK 76
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
+PNIV L E +V E++ SL + E + +D + + + LE
Sbjct: 77 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALE 131
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG 237
+LH +IH IK+ NILL ++ D+G E+ + V YW
Sbjct: 132 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWM--AP 186
Query: 238 GNATRES-----DVYGFGVVLLEILSGR 260
TR++ D++ G++ +E++ G
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 10/202 (4%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLAQH 118
+ F R +G+G+ G VY A K + ++ + L AG ++ S +H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEY 178
PNI+ + G+ ++ E+ + ++ + S D R T A L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALSY 127
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG-LAGYVDDDYWHEKGG 237
H + +IH IK N+LL ++ D+G S AP +R L G +D G
Sbjct: 128 CH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 238 GNATRESDVYGFGVVLLEILSG 259
+ D++ GV+ E L G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 38/218 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 70 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 116
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 117 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
G A YV + EK +A + SD++ G ++ ++++G
Sbjct: 174 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 208
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRI----HPRLVLSNAGFGFASVIKTLSLAQ 117
++ IGQG GTVY A+ ++TG+ VA++++ P+ L + I + +
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL------IINEILVMRENK 75
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
+PNIV L E +V E++ SL + E + +D + + + LE
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALE 130
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG 237
+LH +IH IK+ NILL ++ D+G E+ + V YW
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWM--AP 185
Query: 238 GNATRES-----DVYGFGVVLLEILSGR 260
TR++ D++ G++ +E++ G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRI----HPRLVLSNAGFGFASVIKTLSLAQ 117
++ IGQG GTVY A+ ++TG+ VA++++ P+ L + I + +
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL------IINEILVMRENK 75
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
+PNIV L E +V E++ SL + E + +D + + + LE
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALE 130
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG 237
+LH +IH IK+ NILL ++ D+G E+ + V YW
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWM--AP 185
Query: 238 GNATRES-----DVYGFGVVLLEILSGR 260
TR++ D++ G++ +E++ G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 67 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 113
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 114 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 171 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 225
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 226 YDFPEKFFPK 235
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 74 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 120
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 121 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 178 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 232
Query: 278 MRFSELLDPRLAIPCEIKPLVRLAKVALAC 307
F E P+ E K LV A L C
Sbjct: 233 YDFPEKFFPKARDLVE-KLLVLDATKRLGC 261
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 10/202 (4%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLAQH 118
+ F R +G+G+ G VY A K + ++ + L AG ++ S +H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEY 178
PNI+ + G+ ++ E+ + ++ + S D R T A L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALSY 127
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEKGG 237
H + +IH IK N+LL ++ D+G S AP +R L G +D G
Sbjct: 128 CH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 238 GNATRESDVYGFGVVLLEILSG 259
+ D++ GV+ E L G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 67 RIIGQGRLGTVYAALL-----STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ---H 118
R +G+G G V +TG+ VAVK + P + G A + K + + + H
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKP----ESGGNHIADLKKEIEILRNLYH 70
Query: 119 PNIVPILGFSQAPGERII--VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
NIV G G I + EF+ SL YL +N + +L ++L+ A +G+
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL---KQQLKYAVQICKGM 127
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD---YWH 233
+YL + +H + A N+L+ + ++ D+GL+ +K D D +W+
Sbjct: 128 DYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY 184
Query: 234 EKGGGNATR---ESDVYGFGVVLLEILS 258
++ SDV+ FGV L E+L+
Sbjct: 185 APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 68 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 114
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 115 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 172 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 226
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 227 YDFPEKFFPK 236
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ S D R T A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANAL 126
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ D+G S AP +R L G +D
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMI 183
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 82
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 83 SEEP--IYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG---GNATRE 243
+H ++A+NIL+ E +V D+GL+ L + E G W G T +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 244 SDVYGFGVVLLEILSGRR 261
SDV+ FG++L E+ + R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 90 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 136
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 194 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 248
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 249 YDFPEKFFPK 258
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 90 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 136
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV 193
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 194 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 248
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 249 YDFPEKFFPK 258
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 93 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 139
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 140 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 197 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 251
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 252 YDFPEKFFPK 261
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 92 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 138
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 196 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 250
Query: 278 MRFSELLDPRLAIPCEIKPLVRLAKVALAC 307
F E P+ E K LV A L C
Sbjct: 251 YDFPEKFFPKARDLVE-KLLVLDATKRLGC 279
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ + S D R T A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ ++G S AP +R L G +D
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMI 181
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 93 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 139
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 140 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 197 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 251
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 252 YDFPEKFFPK 261
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 10/205 (4%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLA 116
A + F R +G+G+ G VY A K + ++ + L AG ++ S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HPNI+ + G+ ++ E+ + ++ L + S D R T A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 123
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-GLAGYVDDDYWHEK 235
Y H + +IH IK N+LL ++ ++G S AP +R L G +D
Sbjct: 124 SYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMI 180
Query: 236 GGGNATRESDVYGFGVVLLEILSGR 260
G + D++ GV+ E L G+
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+++I P + + ++ IK L +H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISP---FEHQTYCQRTLREIKILLRFRHE 85
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 137
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 138 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 92 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 138
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 196 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 250
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 251 YDFPEKFFPK 260
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 82
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 83 SEEP--IYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 185
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 92 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 138
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 196 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 250
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 251 YDFPEKFFPK 260
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 61 DGFSHRRIIGQGRLGT-VYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G T V A L+T + A+K + R ++ + + + +S H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 90 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 136
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 194 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 248
Query: 278 MRFSELLDPRLAIPCEIKPLVRLAKVALAC 307
F E P+ E K LV A L C
Sbjct: 249 YDFPEKFFPKARDLVE-KLLVLDATKRLGC 277
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 82
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E+++ L +L + L + + +A A G+ Y+ + N
Sbjct: 83 SEEP--IYIVTEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 185
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 90 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 136
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 194 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 248
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 249 YDFPEKFFPK 258
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 89 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 135
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 136 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 193 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 247
Query: 278 MRFSELLDPRLAIPCEIKPLVRLAKVALAC 307
F E P+ E K LV A L C
Sbjct: 248 YDFPEKFFPKARDLVE-KLLVLDATKRLGC 276
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 101
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + ++ ++ D Y H +ND +
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQ--------I 153
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A P+ L YV
Sbjct: 154 LRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 89 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 135
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 136 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 193 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 247
Query: 278 MRFSELLDPRLAIPCEIKPLVRLAKVALAC 307
F E P+ E K LV A L C
Sbjct: 248 YDFPEKFFPKARDLVE-KLLVLDATKRLGC 276
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 123/327 (37%), Gaps = 67/327 (20%)
Query: 40 ETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAVKRI 93
E LP + +P D + +G+G G V A +T + VAVK +
Sbjct: 15 ERLPYDASKWEFP-------RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML 67
Query: 94 HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFYLHE 152
S + + + + H N+V +LG PG +++ EF +L YL
Sbjct: 68 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 127
Query: 153 NNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLN 200
+ L + + A+G+E+L + IH + A NILL+
Sbjct: 128 KRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS 184
Query: 201 EKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGN---------------ATRESD 245
EK ++CD+GL+ R + Y D DY KG T +SD
Sbjct: 185 EKNVVKICDFGLA-------RDI--YKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSD 234
Query: 246 VYGFGVVLLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEIKPLVRLAK 302
V+ FGV+L EI S L P +K + F L R+ P P + +
Sbjct: 235 VWSFGVLLWEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQ 284
Query: 303 VALACVGNSRKNRPSIVQVATILNNLV 329
L C RP+ ++ L NL+
Sbjct: 285 TMLDCWHGEPSQRPTFSELVEHLGNLL 311
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 124/330 (37%), Gaps = 67/330 (20%)
Query: 37 ESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAV 90
E E LP + +P D + +G+G G V A +T + VAV
Sbjct: 10 EHCERLPYDASKWEFP-------RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 62
Query: 91 KRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFY 149
K + S + + + + H N+V +LG PG +++ EF +L Y
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 150 LHENNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNI 197
L + L + + A+G+E+L + IH + A NI
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 179
Query: 198 LLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGN---------------ATR 242
LL+EK ++CD+GL+ R + Y D DY KG T
Sbjct: 180 LLSEKNVVKICDFGLA-------RDI--YKDPDY-VRKGDARLPLKWMAPETIFDRVYTI 229
Query: 243 ESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEIKPLVR 299
+SDV+ FGV+L EI S L P +K + F L R+ P P
Sbjct: 230 QSDVWSFGVLLWEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--E 279
Query: 300 LAKVALACVGNSRKNRPSIVQVATILNNLV 329
+ + L C RP+ ++ L NL+
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 38/218 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F+ F + L F L +G LL + R++ R T
Sbjct: 95 PFFVK-LYFT-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 141
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 142 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
G A YV + EK +A + SD++ G ++ ++++G
Sbjct: 199 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAG 233
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 85
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 137
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDY- 231
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A + G++ +
Sbjct: 138 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLXEXVA 193
Query: 232 --WHEK-----GGGNATRESDVYGFGVVLLEILSGR 260
W+ T+ D++ G +L E+LS R
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 86
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 138
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDY- 231
RGL+Y+H N++H +K SN+LLN ++CD+GL+ +A + G++ +
Sbjct: 139 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLXEXVA 194
Query: 232 --WHEK-----GGGNATRESDVYGFGVVLLEILSGR 260
W+ T+ D++ G +L E+LS R
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 24/233 (10%)
Query: 60 TDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASV--IKTLSLA 116
+ F + ++G+G G V +A TG++VA+K+I P F ++ IK L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP---FDKPLFALRTLREIKILKHF 66
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+H NI+ I + +I + LH L D + + I R +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-TLRAV 125
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----------EKRGLAGY 226
+ LH N+IH +K SN+L+N +VCD+GL+ + E ++ G+ +
Sbjct: 126 KVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 227 VDDDYWHEK----GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI 275
V ++ +R DV+ G +L E+ R G + L LI
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 125/329 (37%), Gaps = 71/329 (21%)
Query: 40 ETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAVKRI 93
E LP + +P D + +G+G G V A +T + VAVK +
Sbjct: 50 ERLPYDASKWEFP-------RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML 102
Query: 94 HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFYLHE 152
S + + + + H N+V +LG PG +++ EF +L YL
Sbjct: 103 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 162
Query: 153 NNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLN 200
+ L + + A+G+E+L + IH + A NILL+
Sbjct: 163 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS 219
Query: 201 EKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA-----------------TRE 243
EK ++CD+GL+ R + Y D DY + G+A T +
Sbjct: 220 EKNVVKICDFGLA-------RDI--YKDPDYVRK---GDARLPLKWMAPETIFDRVYTIQ 267
Query: 244 SDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEIKPLVRL 300
SDV+ FGV+L EI S L P +K + F L R+ P P +
Sbjct: 268 SDVWSFGVLLWEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--EM 317
Query: 301 AKVALACVGNSRKNRPSIVQVATILNNLV 329
+ L C RP+ ++ L NL+
Sbjct: 318 YQTMLDCWHGEPSQRPTFSELVEHLGNLL 346
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 249
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV+E+++ SL +L + L + + +A A G+ Y+ + N
Sbjct: 250 SEEP--IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 302
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL L D++Y +G
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIE----------DNEYTARQGAKFPIKWTAPE 352
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 353 AALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 125/293 (42%), Gaps = 35/293 (11%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVY---AALLSTGKL---VAVKRIHPRLVLSN--AGFGF 106
E + + + + R +GQG G VY A + G+ VAVK ++ L
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDGASLL 160
ASV+K + ++V +LG ++V E + L YL ENN G
Sbjct: 71 ASVMKGFTCH---HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 161 DWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS---FLAP 217
+++A A G+ YL+ A +H + A N ++ F ++ D+G++ +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 218 EEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPL 274
++G G + + + G T SD++ FGVVL EI S + +GL + L
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 275 IKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
+ + + LD P + L+R+ C + K RP+ +++ +L +
Sbjct: 245 VMDGGY---LDQPDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLLKD 288
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 61 DGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQ- 117
D F R++G+G G V A + TG L AVK + ++L + K LSLA+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
HP + + Q P V EF+N L F++ + + D R A L
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALM 138
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL------SFLAPEEKRGLAGYVDDDY 231
+LH II+ +K N+LL+ + ++ D+G+ + + G Y+ +
Sbjct: 139 FLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI 195
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
E G A D + GV+L E+L G
Sbjct: 196 LQEMLYGPAV---DWWAMGVLLYEMLCG 220
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 125/293 (42%), Gaps = 35/293 (11%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVY---AALLSTGKL---VAVKRIHPRLVLSN--AGFGF 106
E + + + + R +GQG G VY A + G+ VAVK ++ L
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDGASLL 160
ASV+K + ++V +LG ++V E + L YL ENN G
Sbjct: 71 ASVMKGFTCH---HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 161 DWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS---FLAP 217
+++A A G+ YL+ A +H + A N ++ F ++ D+G++ +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETA 184
Query: 218 EEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPL 274
++G G + + + G T SD++ FGVVL EI S + +GL + L
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 275 IKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
+ + + LD P + L+R+ C + K RP+ +++ +L +
Sbjct: 245 VMDGGY---LDQPDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLLKD 288
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 124/335 (37%), Gaps = 77/335 (22%)
Query: 37 ESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAV 90
E E LP + +P D + +G+G G V A +T + VAV
Sbjct: 1 EHAERLPYDASKWEFP-------RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 53
Query: 91 KRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFY 149
K + S + + + + H N+V +LG PG ++++EF +L Y
Sbjct: 54 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTY 113
Query: 150 LHENNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNI 197
L + L + + A+G+E+L + IH + A NI
Sbjct: 114 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 170
Query: 198 LLNEKFCARVCDYGLS--------------------FLAPEEKRGLAGYVDDDYWHEKGG 237
LL+EK ++CD+GL+ ++APE D Y
Sbjct: 171 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPET------IFDRVY------ 218
Query: 238 GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEI 294
T +SDV+ FGV+L EI S L P +K + F L R+ P
Sbjct: 219 ---TIQSDVWSFGVLLWEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 267
Query: 295 KPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
P + + L C RP+ ++ L NL+
Sbjct: 268 TP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 47 CAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLS 100
A Y E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 101 N--AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------E 152
ASV+K + ++V +LG +++ E + L YL E
Sbjct: 71 ERIEFLNEASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 127
Query: 153 NNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212
NN + ++ +++A A G+ YL+ A +H + A N ++ E F ++ D+G+
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 184
Query: 213 S---FLAPEEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ + ++G G + + + G T SDV+ FGVVL EI + + +GL
Sbjct: 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244
Query: 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
+ L + E LLD P + L+R+ C + K RPS +++ +
Sbjct: 245 SNEQVLRFVME---GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIIS 292
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 123/323 (38%), Gaps = 63/323 (19%)
Query: 40 ETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAVKRI 93
E LP + +P ++ + +G+G G V A +T + VAVK +
Sbjct: 13 ERLPYDASKWEFPRDRLNLG-------KPLGRGAFGQVIEADAFGIDKTATXRTVAVKML 65
Query: 94 HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFYLHE 152
S + + + + H N+V +LG PG +++ EF +L YL
Sbjct: 66 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 153 NNDG--------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFC 204
+ L + + A+G+E+L + IH + A NILL+EK
Sbjct: 126 KRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV 182
Query: 205 ARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGN---------------ATRESDVYGF 249
++ D+GL+ R + Y D DY KG T +SDV+ F
Sbjct: 183 VKIXDFGLA-------RDI--YKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 232
Query: 250 GVVLLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEIKPLVRLAKVALA 306
GV+L EI S L P +K + F L R+ P P + + L
Sbjct: 233 GVLLWEIFS--------LGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTP--EMYQTMLD 282
Query: 307 CVGNSRKNRPSIVQVATILNNLV 329
C RP+ ++ L NL+
Sbjct: 283 CWHGEPSQRPTFSELVEHLGNLL 305
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 122/330 (36%), Gaps = 75/330 (22%)
Query: 40 ETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAVKRI 93
E LP + +P D + +G+G G V A +T + VAVK +
Sbjct: 15 ERLPYDASKWEFP-------RDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML 67
Query: 94 HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFYLHE 152
S + + + + H N+V +LG PG +++ EF +L YL
Sbjct: 68 KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 127
Query: 153 NNDG----------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202
+ L + + A+G+E+L + IH + A NILL+EK
Sbjct: 128 KRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEK 184
Query: 203 FCARVCDYGLS--------------------FLAPEEKRGLAGYVDDDYWHEKGGGNATR 242
++CD+GL+ ++APE D Y T
Sbjct: 185 NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPET------IFDRVY---------TI 229
Query: 243 ESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEIKPLVR 299
+SDV+ FGV+L EI S L P +K + F L R+ P P
Sbjct: 230 QSDVWSFGVLLWEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--E 279
Query: 300 LAKVALACVGNSRKNRPSIVQVATILNNLV 329
+ + L C RP+ ++ L NL+
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 39/214 (18%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G++YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL-- 146
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--HEKGGGN 239
+ +H + A N +L+EKF +V D+GL+ D +Y+ H K G
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLA----------RDMYDKEYYSVHNKTGAK 195
Query: 240 A---------------TRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 47 CAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLS 100
A Y E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 64
Query: 101 N--AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------E 152
ASV+K + ++V +LG +++ E + L YL E
Sbjct: 65 ERIEFLNEASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 153 NNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212
NN + ++ +++A A G+ YL+ A +H + A N ++ E F ++ D+G+
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 178
Query: 213 S---FLAPEEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ + ++G G + + + G T SDV+ FGVVL EI + + +GL
Sbjct: 179 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 238
Query: 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
+ L + E LLD P + L+R+ C + K RPS +++ +
Sbjct: 239 SNEQVLRFVME---GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIIS 286
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 39/213 (18%)
Query: 68 IIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 124 ILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQG 182
+LG ++ G ++V ++ L ++ ++ D + A+G++YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 141
Query: 183 VAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--HEKGGGNA 240
+ +H + A N +L+EKF +V D+GL+ D +Y+ H K G
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLA----------RDMYDKEYYSVHNKTGAKL 191
Query: 241 ---------------TRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 39/214 (18%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G++YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL-- 149
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--HEKGGGN 239
+ +H + A N +L+EKF +V D+GL+ D +Y+ H K G
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLA----------RDMYDKEYYSVHNKTGAK 198
Query: 240 A---------------TRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 39/214 (18%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G++YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL-- 149
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--HEKGGGN 239
+ +H + A N +L+EKF +V D+GL+ D +Y+ H K G
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLA----------RDMYDKEYYSVHNKTGAK 198
Query: 240 A---------------TRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 55/293 (18%)
Query: 67 RIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGF----GFASVIKTLS-LAQHPN 120
+ +G G G V A GK AV ++ +++ S A S +K +S L QH N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
IV +LG G ++++E+ L +L + +L+ + IA A + LH
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK---SRVLETDPAFAIANSTASTRDLLH 168
Query: 181 ------QGVA----PNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD 230
QG+A N IH + A N+LL A++ D+GL+ R + ++D
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA-------RDI---MNDS 218
Query: 231 YWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL-P 273
+ KG T +SDV+ +G++L EI S G G+LV
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326
L+K+ ++ P A P I +++ AC +RP+ Q+ + L
Sbjct: 279 LVKDGY--QMAQPAFA-PKNIYSIMQ------ACWALEPTHRPTFQQICSFLQ 322
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 122/290 (42%), Gaps = 53/290 (18%)
Query: 67 RIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGF----GFASVIKTLS-LAQHPN 120
+ +G G G V A GK AV ++ +++ S A S +K +S L QH N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLH-------ENNDGASLLDWNRRLRIATGAA 173
IV +LG G ++++E+ L +L + DG L + L ++ A
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL-ELRDLLHFSSQVA 162
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
+G+ +L + N IH + A N+LL A++ D+GL+ ++D +
Sbjct: 163 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA----------RDIMNDSNYI 209
Query: 234 EKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL-PLIK 276
KG T +SDV+ +G++L EI S G G+LV L+K
Sbjct: 210 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 269
Query: 277 EMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326
+ ++ P A P I +++ AC +RP+ Q+ + L
Sbjct: 270 DGY--QMAQPAFA-PKNIYSIMQ------ACWALEPTHRPTFQQICSFLQ 310
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 35/293 (11%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVY---AALLSTGKL---VAVKRIHPRLVLSN--AGFGF 106
E + + + + R +GQG G VY A + G+ VAVK ++ L
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDGASLL 160
ASV+K + ++V +LG ++V E + L YL ENN G
Sbjct: 71 ASVMKGFTCH---HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 161 DWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219
+++A A G+ YL+ A +H + A N ++ F ++ D+G++ E
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Query: 220 --KRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPL 274
++G G + + + G T SD++ FGVVL EI S + +GL + L
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 275 IKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
+ + + LD P + L+R+ C + K RP+ +++ +L +
Sbjct: 245 VMDGGY---LDQPDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLLKD 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 47 CAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLS 100
A Y E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 101 N--AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------E 152
ASV+K + ++V +LG +++ E + L YL E
Sbjct: 64 ERIEFLNEASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 153 NNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212
NN + ++ +++A A G+ YL+ A +H + A N ++ E F ++ D+G+
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 213 S---FLAPEEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ + ++G G + + + G T SDV+ FGVVL EI + + +GL
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 237
Query: 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
+ L + E LLD P + L+R+ C + K RPS +++ +
Sbjct: 238 SNEQVLRFVME---GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIIS 285
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 35/293 (11%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVY---AALLSTGKL---VAVKRIHPRLVLSN--AGFGF 106
E + + + + R +GQG G VY A + G+ VAVK ++ L
Sbjct: 8 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 67
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDGASLL 160
ASV+K + ++V +LG ++V E + L YL ENN G
Sbjct: 68 ASVMKGFTCH---HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 124
Query: 161 DWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219
+++A A G+ YL+ A +H + A N ++ F ++ D+G++ E
Sbjct: 125 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 181
Query: 220 --KRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPL 274
++G G + + + G T SD++ FGVVL EI S + +GL + L
Sbjct: 182 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 241
Query: 275 IKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
+ + + LD P + L+R+ C + K RP+ +++ +L +
Sbjct: 242 VMDGGY---LDQPDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLLKD 285
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 47 CAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLS 100
A Y E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 101 N--AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------E 152
ASV+K + ++V +LG +++ E + L YL E
Sbjct: 64 ERIEFLNEASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 153 NNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212
NN + ++ +++A A G+ YL+ A +H + A N ++ E F ++ D+G+
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 213 S---FLAPEEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ + ++G G + + + G T SDV+ FGVVL EI + + +GL
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 237
Query: 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
+ L + E LLD P + L+R+ C + K RPS +++ +
Sbjct: 238 SNEQVLRFVME---GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIIS 285
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 39/214 (18%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G++YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL-- 168
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--HEKGGGN 239
+ +H + A N +L+EKF +V D+GL+ D +Y+ H K G
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLA----------RDMYDKEYYSVHNKTGAK 217
Query: 240 A---------------TRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 218 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 39/214 (18%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G++YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL-- 144
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--HEKGGGN 239
+ +H + A N +L+EKF +V D+GL+ D +Y+ H K G
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLA----------RDMYDKEYYSVHNKTGAK 193
Query: 240 A---------------TRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 194 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 47 CAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLS 100
A Y E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 64
Query: 101 N--AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------E 152
ASV+K + ++V +LG +++ E + L YL E
Sbjct: 65 ERIEFLNEASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 153 NNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212
NN + ++ +++A A G+ YL+ A +H + A N ++ E F ++ D+G+
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 178
Query: 213 SFLAPEE---KRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ E ++G G + + + G T SDV+ FGVVL EI + + +GL
Sbjct: 179 TRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 238
Query: 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
+ L + E LLD P + L+R+ C + K RPS +++ +
Sbjct: 239 SNEQVLRFVME---GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIIS 286
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 35/208 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+GQG G V+ + VA+K + P + A A V+K L +H +V +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV 82
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
S+ P IV E+++ L +L + L + + +A A G+ Y+ + N
Sbjct: 83 SEEP--IYIVMEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGG---------- 237
+H ++A+NIL+ E +V D+GL+ L D++Y +G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIE----------DNEYTARQGAKFPIKWTAPE 185
Query: 238 ----GNATRESDVYGFGVVLLEILSGRR 261
G T +SDV+ FG++L E+ + R
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 39/214 (18%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G++YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL-- 147
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--HEKGGGN 239
+ +H + A N +L+EKF +V D+GL+ D +Y+ H K G
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLA----------RDMYDKEYYSVHNKTGAK 196
Query: 240 A---------------TRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH---PNIVPI 124
+G+G G+VY A+ TG++VA+K++ V S+ +IK +S+ Q P++V
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVP---VESD----LQEIIKEISIMQQCDSPHVVKY 89
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVA 184
G + IV E+ S+ + N L + I +GLEYLH
Sbjct: 90 YGSYFKNTDLWIVMEYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLH---F 143
Query: 185 PNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH-----EKGGGN 239
IH IKA NILLN + A++ D+G++ + + +W ++ G N
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 240 ATRESDVYGFGVVLLEILSGR 260
+D++ G+ +E+ G+
Sbjct: 204 CV--ADIWSLGITAIEMAEGK 222
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 39/214 (18%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G++YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL-- 148
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--HEKGGGN 239
+ +H + A N +L+EKF +V D+GL+ D +Y+ H K G
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLA----------RDMYDKEYYSVHNKTGAK 197
Query: 240 A---------------TRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 44/250 (17%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQH 118
+ F +I+G+G TV A L+T + A+K + R ++ + + + +S H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL--------RIAT 170
P V L F F + L F L +G LL + R++ R T
Sbjct: 97 PFFVK-LYFC-----------FQDDEKLYFGLSYAKNG-ELLKYIRKIGSFDETCTRFYT 143
Query: 171 GA-ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR------- 221
LEYLH IIH +K NILLNE ++ D+G + L+PE K+
Sbjct: 144 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG----RRCEEGLLVKWALPLIKE 277
G A YV + EK +A + SD++ G ++ ++++G R E L+ + + L E
Sbjct: 201 GTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--E 255
Query: 278 MRFSELLDPR 287
F E P+
Sbjct: 256 YDFPEKFFPK 265
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 51/289 (17%)
Query: 67 RIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGF----GFASVIKTLS-LAQHPN 120
+ +G G G V A GK AV ++ +++ S A S +K +S L QH N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHE------NNDGASLLDWNRRLRIATGAAR 174
IV +LG G ++++E+ L +L + + L+ L ++ A+
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHE 234
G+ +L + N IH + A N+LL A++ D+GL+ ++D +
Sbjct: 172 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA----------RDIMNDSNYIV 218
Query: 235 KGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL-PLIKE 277
KG T +SDV+ +G++L EI S G G+LV L+K+
Sbjct: 219 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 278
Query: 278 MRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326
++ P A P I +++ AC +RP+ Q+ + L
Sbjct: 279 G--YQMAQPAFA-PKNIYSIMQ------ACWALEPTHRPTFQQICSFLQ 318
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 39/214 (18%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G++YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL-- 167
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--HEKGGGN 239
+ +H + A N +L+EKF +V D+GL+ D +Y+ H K G
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLA----------RDMYDKEYYSVHNKTGAK 216
Query: 240 A---------------TRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 217 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 120/281 (42%), Gaps = 35/281 (12%)
Query: 67 RIIGQGRLGTVY---AALLSTGKL---VAVKRIHPRLVLSN--AGFGFASVIKTLSLAQH 118
R +GQG G VY A + G+ VAVK ++ L ASV+K +
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-- 79
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDGASLLDWNRRLRIATGA 172
++V +LG ++V E + L YL ENN G +++A
Sbjct: 80 -HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS---FLAPEEKRGLAGYVDD 229
A G+ YL+ A +H + A N ++ F ++ D+G++ + ++G G +
Sbjct: 139 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 230 DYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDP 286
+ + G T SD++ FGVVL EI S + +GL + L + + + LD
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY---LDQ 252
Query: 287 RLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
P + L+R+ C + K RP+ +++ +L +
Sbjct: 253 PDNCPERVTDLMRM------CWQFNPKMRPTFLEIVNLLKD 287
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 124/320 (38%), Gaps = 47/320 (14%)
Query: 37 ESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAV 90
E E LP + +P D + +G+G G V A +T + VAV
Sbjct: 10 EHCERLPYDASKWEFP-------RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 62
Query: 91 KRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFY 149
K + S + + + + H N+V +LG PG +++ EF +L Y
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 150 LHENNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNI 197
L + L + + A+G+E+L + IH + A NI
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 179
Query: 198 LLNEKFCARVCDYGLS---FLAPEEKRGLAGYVDDDYWHEKGGGNA--TRESDVYGFGVV 252
LL+EK ++CD+GL+ + P+ R + + + + T +SDV+ FGV+
Sbjct: 180 LLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 253 LLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEIKPLVRLAKVALACVG 309
L EI S L P +K + F L R+ P P + + L C
Sbjct: 240 LWEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWH 289
Query: 310 NSRKNRPSIVQVATILNNLV 329
RP+ ++ L NL+
Sbjct: 290 GEPSQRPTFSELVEHLGNLL 309
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 47 CAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLS 100
A Y E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 33 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 92
Query: 101 N--AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------E 152
ASV+K + ++V +LG +++ E + L YL E
Sbjct: 93 ERIEFLNEASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 149
Query: 153 NNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212
NN + ++ +++A A G+ YL+ A +H + A N ++ E F ++ D+G+
Sbjct: 150 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 206
Query: 213 S---FLAPEEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ + ++G G + + + G T SDV+ FGVVL EI + + +GL
Sbjct: 207 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 266
Query: 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
+ L + E LLD P + L+R+ C + K RPS +++ +
Sbjct: 267 SNEQVLRFVME---GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIIS 314
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 123/289 (42%), Gaps = 35/289 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSN--AGFGF 106
E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDGASLL 160
ASV+K + ++V +LG +++ E + L YL ENN +
Sbjct: 70 ASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 126
Query: 161 DWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS---FLAP 217
++ +++A A G+ YL+ A +H + A N ++ E F ++ D+G++ +
Sbjct: 127 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
Query: 218 EEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPL 274
++G G + + + G T SDV+ FGVVL EI + + +GL + L
Sbjct: 184 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 243
Query: 275 IKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
+ E LLD P + L+R+ C + K RPS +++ +
Sbjct: 244 VME---GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIIS 283
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 123/289 (42%), Gaps = 35/289 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSN--AGFGF 106
E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDGASLL 160
ASV+K + ++V +LG +++ E + L YL ENN +
Sbjct: 66 ASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 161 DWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS---FLAP 217
++ +++A A G+ YL+ A +H + A N ++ E F ++ D+G++ +
Sbjct: 123 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 218 EEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPL 274
++G G + + + G T SDV+ FGVVL EI + + +GL + L
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 239
Query: 275 IKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
+ E LLD P + L+R+ C + K RPS +++ +
Sbjct: 240 VME---GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIIS 279
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 35/289 (12%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSN--AGFGF 106
E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDGASLL 160
ASV+K + ++V +LG +++ E + L YL ENN +
Sbjct: 64 ASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 161 DWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219
++ +++A A G+ YL+ A +H + A N ++ E F ++ D+G++ E
Sbjct: 121 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
Query: 220 --KRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPL 274
++G G + + + G T SDV+ FGVVL EI + + +GL + L
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 237
Query: 275 IKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
+ E LLD P + L+R+ C + K RPS +++ +
Sbjct: 238 VME---GGLLDKPDNCPDMLLELMRM------CWQYNPKMRPSFLEIIS 277
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILG 126
+G+G G V+ ++ TG++VAVK+I S +A F ++ L+ H NIV +L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186
+A +R + F M + LH A++L+ + + + ++YLH G
Sbjct: 77 VLRADNDRDVYLVFDYMET---DLHAV-IRANILEPVHKQYVVYQLIKVIKYLHSG---G 129
Query: 187 IIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-----------GLAGYVDD-----D 230
++H +K SNILLN + +V D+GLS +R + DD D
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 231 Y----WHEK-----GGGNATRESDVYGFGVVLLEILSGR 260
Y W+ G T+ D++ G +L EIL G+
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 31/215 (14%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
+++ IG+G G V +A + K+ VA+K+I P + + ++ IK L +H
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHE 81
Query: 120 NIVPILGFSQAPGERIIVSEFI--NMASLDFY-----LHENNDGASLLDWNRRLRIATGA 172
NI+ I +AP + +I ++ D Y H +ND +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ--------I 133
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PEEKRG--LAGYVDD 229
RGL+Y+H N++H +K SN+LLN ++ D+GL+ +A P+ L YV
Sbjct: 134 LRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 230 DYWHEK----GGGNATRESDVYGFGVVLLEILSGR 260
++ T+ D++ G +L E+LS R
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 123/335 (36%), Gaps = 77/335 (22%)
Query: 37 ESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAV 90
E E LP + +P D + +G+G G V A +T + VAV
Sbjct: 1 EHAERLPYDASKWEFP-------RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 53
Query: 91 KRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFY 149
K + S + + + + H N+V +LG PG +++ EF +L Y
Sbjct: 54 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 113
Query: 150 LHENNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNI 197
L + L + + A+G+E+L + IH + A NI
Sbjct: 114 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 170
Query: 198 LLNEKFCARVCDYGLS--------------------FLAPEEKRGLAGYVDDDYWHEKGG 237
LL+EK ++CD+GL+ ++APE D Y
Sbjct: 171 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPET------IFDRVY------ 218
Query: 238 GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEI 294
T +SDV+ FGV+L EI S L P +K + F L R+ P
Sbjct: 219 ---TIQSDVWSFGVLLWEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 267
Query: 295 KPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
P + + L C RP+ ++ L NL+
Sbjct: 268 TP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 46/319 (14%)
Query: 37 ESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAV 90
E E LP + +P ++ + +G+G G V A +T + VAV
Sbjct: 11 EHCERLPYDASKWEFPRDRLNLG-------KPLGRGAFGQVIEADAFGIDKTATCRTVAV 63
Query: 91 KRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFY 149
K + S + + + + H N+V +LG PG +++ EF +L Y
Sbjct: 64 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 123
Query: 150 LHENNDG-----------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
L + L + + A+G+E+L + IH + A NIL
Sbjct: 124 LRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNIL 180
Query: 199 LNEKFCARVCDYGLS---FLAPEEKRGLAGYVDDDYWHEKGGGNA--TRESDVYGFGVVL 253
L+EK ++CD+GL+ P+ R + + + + T +SDV+ FGV+L
Sbjct: 181 LSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 254 LEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEIKPLVRLAKVALACVGN 310
EI S L P +K + F L R+ P P + + L C
Sbjct: 241 WEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHG 290
Query: 311 SRKNRPSIVQVATILNNLV 329
RP+ ++ L NL+
Sbjct: 291 EPSQRPTFSELVEHLGNLL 309
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 24/233 (10%)
Query: 60 TDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASV--IKTLSLA 116
+ F + ++G+G G V +A TG++VA+K+I P F ++ IK L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP---FDKPLFALRTLREIKILKHF 66
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+H NI+ I + +I + LH L D + + I R +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-TLRAV 125
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----------EKRGLAGY 226
+ LH N+IH +K SN+L+N +VCD+GL+ + E ++ G+
Sbjct: 126 KVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 227 VDDDYWHEK----GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI 275
V ++ +R DV+ G +L E+ R G + L LI
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 43/275 (15%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
+G G+ G V VAVK I + + F A + LS HP +V G
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS---HPKLVKFYGVC 72
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
IV+E+I+ L YL + G L+ ++ L + G+ +L + I
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKG---LEPSQLLEMCYDVCEGMAFLE---SHQFI 126
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG---------- 238
H + A N L++ C +V D+G++ YV DD + G
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMT-----------RYVLDDQYVSSVGTKFPVKWSAPE 175
Query: 239 -----NATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293
+ +SDV+ FG+++ E+ S + L + ++K + L P LA
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-SEVVLKVSQGHRLYRPHLASDT- 233
Query: 294 IKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
+ ++ +C + RP+ Q+ + + L
Sbjct: 234 ------IYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 81/200 (40%), Gaps = 16/200 (8%)
Query: 67 RIIGQGRLGTVYAALLSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
RI+G+G G VY + + K VAVK L N F S + HP+IV
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE-KFMSEAVIMKNLDHPHIV 72
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQG 182
++G + II+ E L YL N + +L + + + + YL
Sbjct: 73 KLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLE-- 126
Query: 183 VAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD-DDYWHEKGGGNAT 241
+ N +H I NIL+ C ++ D+GLS +E A W N
Sbjct: 127 -SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 185
Query: 242 R---ESDVYGFGVVLLEILS 258
R SDV+ F V + EILS
Sbjct: 186 RFTTASDVWMFAVCMWEILS 205
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
D F R++G+G G V+A + +TGKL A K+++ + + G+ A V K + H
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 120 NIVPILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEY 178
+ L ++ + + +V +N + ++++ ++ R + GLE+
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKG-- 236
LHQ NII+ +K N+LL++ R+ D GL+ + GY +
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 237 -GGNATRESDVYGFGVVLLEILSGR 260
G D + GV L E+++ R
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVY---AALLSTGKL---VAVKRIHPRLVLSN--A 102
Y E + + + + R +GQG G VY A + G+ VAVK ++ L
Sbjct: 7 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 103 GFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDG 156
ASV+K + ++V +LG ++V E + L YL ENN G
Sbjct: 67 FLNEASVMKGFTCH---HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 157 ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--- 213
+++A A G+ YL+ A +H + A N ++ F ++ D+G++
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 214 FLAPEEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
+ ++G G + + + G T SD++ FGVVL EI S + +GL +
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
L + + + LD P + L+R+ C + RP+ +++ +L +
Sbjct: 241 VLKFVMDGGY---LDQPDNCPERVTDLMRM------CWQFNPNMRPTFLEIVNLLKD 288
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVY---AALLSTGKL---VAVKRIHPRLVLSN--A 102
Y E + + + + R +GQG G VY A + G+ VAVK ++ L
Sbjct: 8 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 67
Query: 103 GFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDG 156
ASV+K + ++V +LG ++V E + L YL ENN G
Sbjct: 68 FLNEASVMKGFTCH---HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 124
Query: 157 ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--- 213
+++A A G+ YL+ A +H + A N ++ F ++ D+G++
Sbjct: 125 RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI 181
Query: 214 FLAPEEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
+ ++G G + + + G T SD++ FGVVL EI S + +GL +
Sbjct: 182 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 241
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
L + + + LD P + L+R+ C + RP+ +++ +L +
Sbjct: 242 VLKFVMDGGY---LDQPDNCPERVTDLMRM------CWQFNPNMRPTFLEIVNLLKD 289
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 55/293 (18%)
Query: 67 RIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGF----GFASVIKTLS-LAQHPN 120
+ +G G G V A GK AV ++ +++ S A S +K +S L QH N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENN-----DGA-----SLLDWNRRLRIAT 170
IV +LG G ++++E+ L +L + D A S L L ++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 171 GAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD 230
A+G+ +L + N IH + A N+LL A++ D+GL+ ++D
Sbjct: 172 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA----------RDIMNDS 218
Query: 231 YWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL-P 273
+ KG T +SDV+ +G++L EI S G G+LV
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326
L+K+ ++ P A P I +++ AC +RP+ Q+ + L
Sbjct: 279 LVKDGY--QMAQPAFA-PKNIYSIMQ------ACWALEPTHRPTFQQICSFLQ 322
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 81/200 (40%), Gaps = 16/200 (8%)
Query: 67 RIIGQGRLGTVYAALLSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
RI+G+G G VY + + K VAVK L N F S + HP+IV
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE-KFMSEAVIMKNLDHPHIV 88
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQG 182
++G + II+ E L YL N + +L + + + + YL
Sbjct: 89 KLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLE-- 142
Query: 183 VAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD-DDYWHEKGGGNAT 241
+ N +H I NIL+ C ++ D+GLS +E A W N
Sbjct: 143 -SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 242 R---ESDVYGFGVVLLEILS 258
R SDV+ F V + EILS
Sbjct: 202 RFTTASDVWMFAVCMWEILS 221
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 35/297 (11%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVY---AALLSTGKL---VAVKRIHPRLVLSN--A 102
Y E + + + + R +GQG G VY A + G+ VAVK ++ L
Sbjct: 7 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 103 GFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDG 156
ASV+K + ++V +LG ++V E + L YL ENN G
Sbjct: 67 FLNEASVMKGFTCH---HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 157 ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
+++A A G+ YL+ A +H + A N ++ F ++ D+G++
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 217 PEE---KRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
E ++G G + + + G T SD++ FGVVL EI S + +GL +
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327
L + + + LD P + L+R+ C + RP+ +++ +L +
Sbjct: 241 VLKFVMDGGY---LDQPDNCPERVTDLMRM------CWQFNPNMRPTFLEIVNLLKD 288
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
D F R++G+G G V+A + +TGKL A K+++ + + G+ A V K + H
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 120 NIVPILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEY 178
+ L ++ + + +V +N + ++++ ++ R + GLE+
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKG-- 236
LHQ NII+ +K N+LL++ R+ D GL+ + GY +
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 237 -GGNATRESDVYGFGVVLLEILSGR 260
G D + GV L E+++ R
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 39/219 (17%)
Query: 60 TDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQ 117
+D + +R++G+G G V TG+ AVK I R V ++ L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW--NRRLRIATGAAR- 174
HPNI+ + F + G +V E G L D +R+ AAR
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYT-------------GGELFDEIISRKRFSEVDAARI 137
Query: 175 ------GLEYLHQGVAPNIIHGCIKASNILLNEKF---CARVCDYGLS--FLAP---EEK 220
G+ Y+H+ I+H +K N+LL K R+ D+GLS F A ++K
Sbjct: 138 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 194
Query: 221 RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
G A Y+ + H G + DV+ GV+L +LSG
Sbjct: 195 IGTAYYIAPEVLH----GTYDEKCDVWSTGVILYILLSG 229
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 81/200 (40%), Gaps = 16/200 (8%)
Query: 67 RIIGQGRLGTVYAALLSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
RI+G+G G VY + + K VAVK L N F S + HP+IV
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE-KFMSEAVIMKNLDHPHIV 76
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQG 182
++G + II+ E L YL N + +L + + + + YL
Sbjct: 77 KLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLE-- 130
Query: 183 VAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD-DDYWHEKGGGNAT 241
+ N +H I NIL+ C ++ D+GLS +E A W N
Sbjct: 131 -SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 242 R---ESDVYGFGVVLLEILS 258
R SDV+ F V + EILS
Sbjct: 190 RFTTASDVWMFAVCMWEILS 209
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 35/293 (11%)
Query: 51 YPLTEIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSN--A 102
Y E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 61
Query: 103 GFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH------ENNDG 156
ASV+K + ++V +LG +++ E + L YL ENN
Sbjct: 62 FLNEASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 157 ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--- 213
+ ++ +++A A G+ YL+ A +H + A N + E F ++ D+G++
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDI 175
Query: 214 FLAPEEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
+ ++G G + + + G T SDV+ FGVVL EI + + +GL +
Sbjct: 176 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
L + E LLD P + L+R+ C + K RPS +++ +
Sbjct: 236 VLRFVME---GGLLDKPDNCPDMLLELMRM------CWQYNPKMRPSFLEIIS 279
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 39/219 (17%)
Query: 60 TDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQ 117
+D + +R++G+G G V TG+ AVK I R V ++ L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW--NRRLRIATGAAR- 174
HPNI+ + F + G +V E G L D +R+ AAR
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYT-------------GGELFDEIISRKRFSEVDAARI 131
Query: 175 ------GLEYLHQGVAPNIIHGCIKASNILLNEKF---CARVCDYGLS--FLAP---EEK 220
G+ Y+H+ I+H +K N+LL K R+ D+GLS F A ++K
Sbjct: 132 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 221 RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
G A Y+ + H G + DV+ GV+L +LSG
Sbjct: 189 IGTAYYIAPEVLH----GTYDEKCDVWSTGVILYILLSG 223
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G+++L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL-- 150
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLS-------FLAPEEKRGLAGYVDDDYWHE 234
+ +H + A N +L+EKF +V D+GL+ F + K G V
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 235 KGGGNATRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G+++L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL-- 150
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLS-------FLAPEEKRGLAGYVDDDYWHE 234
+ +H + A N +L+EKF +V D+GL+ F + K G V
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 235 KGGGNATRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
D F R++G+G G V+A + +TGKL A K+++ + + G+ A V K + H
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 120 NIVPILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEY 178
+ L ++ + + +V +N + ++++ ++ R + GLE+
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKG-- 236
LHQ NII+ +K N+LL++ R+ D GL+ + GY +
Sbjct: 305 LHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 237 -GGNATRESDVYGFGVVLLEILSGR 260
G D + GV L E+++ R
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
D F R++G+G G V+A + +TGKL A K+++ + + G+ A V K + H
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 120 NIVPILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEY 178
+ L ++ + + +V +N + ++++ ++ R + GLE+
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKG-- 236
LHQ NII+ +K N+LL++ R+ D GL+ + GY +
Sbjct: 305 LHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 237 -GGNATRESDVYGFGVVLLEILSGR 260
G D + GV L E+++ R
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G+++L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL-- 149
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLS-------FLAPEEKRGLAGYVDDDYWHE 234
+ +H + A N +L+EKF +V D+GL+ F + K G V
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 235 KGGGNATRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G+++L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL-- 147
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLS-------FLAPEEKRGLAGYVDDDYWHE 234
+ +H + A N +L+EKF +V D+GL+ F + K G V
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 235 KGGGNATRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G+++L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL-- 149
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLS-------FLAPEEKRGLAGYVDDDYWHE 234
+ +H + A N +L+EKF +V D+GL+ F + K G V
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 235 KGGGNATRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G+++L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL-- 208
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLS-------FLAPEEKRGLAGYVDDDYWHE 234
+ +H + A N +L+EKF +V D+GL+ F + K G V
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 235 KGGGNATRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G+++L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL-- 154
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLS-------FLAPEEKRGLAGYVDDDYWHE 234
+ +H + A N +L+EKF +V D+GL+ F + K G V
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 235 KGGGNATRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 69 IGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFG-FASVIKTLSLAQHPNIVPILG 126
+G G G V TG VAVK ++ + + S G I+ L L +HP+I+ +
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186
P + +V E+++ L Y+ +N LD R+ G++Y H+ +
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKN----GRLDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 187 IIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-----GLAGYVDDDYWHEKGGGNAT 241
++H +K N+LL+ A++ D+GLS + + + G Y + G A
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVI--SGRLYAG 194
Query: 242 RESDVYGFGVVLLEILSG 259
E D++ GV+L +L G
Sbjct: 195 PEVDIWSSGVILYALLCG 212
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 18/214 (8%)
Query: 57 DAATDGFSHRRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSL 115
D D F R IG+G G V T K+ A+K ++ + + +V K L +
Sbjct: 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEV--RNVFKELQI 68
Query: 116 AQ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGA 172
Q HP +V + Q + +V + + L ++L +N + +L I
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN---VHFKEETVKLFICE-L 124
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-----GLAGYV 227
L+YL IIH +K NILL+E + D+ ++ + P E + G Y+
Sbjct: 125 VMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYM 181
Query: 228 DDDYWHEKGGGNATRESDVYGFGVVLLEILSGRR 261
+ + + G + D + GV E+L GRR
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 35/297 (11%)
Query: 47 CAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLS 100
A Y E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 101 N--AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------ 152
ASV+K + ++V +LG +++ E + L YL
Sbjct: 71 ERIEFLNEASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 127
Query: 153 NNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212
NN + ++ +++A A G+ YL+ A +H + A N ++ E F ++ D+G+
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 184
Query: 213 S---FLAPEEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ + ++G G + + + G T SDV+ FGVVL EI + + +GL
Sbjct: 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244
Query: 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
+ L + E LLD P + L+R+ C + K RPS +++ +
Sbjct: 245 SNEQVLRFVME---GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIIS 292
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 67 RIIGQGRLGTVYAALL--STGKLV--AVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+IG+G G VY L + GK + AVK ++ R+ F + + HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 123 PILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
+LG ++ G ++V ++ L ++ ++ D + A+G++YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL-- 148
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLS-------FLAPEEKRGLAGYVDDDYWHE 234
+ +H + A N +L+EKF +V D+GL+ + K G V
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 235 KGGGNATRESDVYGFGVVLLEILS 258
T +SDV+ FGV+L E+++
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 123/320 (38%), Gaps = 47/320 (14%)
Query: 37 ESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAA------LLSTGKLVAV 90
E E LP + +P D + +G+G G V A +T + VAV
Sbjct: 10 EHCERLPYDASKWEFP-------RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 62
Query: 91 KRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ERIIVSEFINMASLDFY 149
K + S + + + + H N+V +LG PG +++ EF +L Y
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 150 LHENNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNI 197
L + L + + A+G+E+L + IH + A NI
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 179
Query: 198 LLNEKFCARVCDYGLS---FLAPEEKRGLAGYVDDDYWHEKGGGNA--TRESDVYGFGVV 252
LL+EK ++CD+GL+ P+ R + + + + T +SDV+ FGV+
Sbjct: 180 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 253 LLEILSGRRCEEGLLVKWALPLIK-EMRFSELLD--PRLAIPCEIKPLVRLAKVALACVG 309
L EI S L P +K + F L R+ P P + + L C
Sbjct: 240 LWEIFS--------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWH 289
Query: 310 NSRKNRPSIVQVATILNNLV 329
RP+ ++ L NL+
Sbjct: 290 GEPSQRPTFSELVEHLGNLL 309
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ---H 118
FS R IG G G VY A + ++VA+K++ SN + +IK + Q H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW--QDIIKEVRFLQKLRH 113
Query: 119 PNIVPILGFSQAPGERIIVSEF-INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
PN + G +V E+ + AS +H+ L + GA +GL
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP-----LQEVEIAAVTHGALQGLA 168
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG-LSFLAPEEKRGLAGYVDDDYWHEK- 235
YLH + N+IH +KA NILL+E ++ D+G S +AP +V YW
Sbjct: 169 YLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-----FVGTPYWMAPE 220
Query: 236 -----GGGNATRESDVYGFGVVLLEI 256
G + DV+ G+ +E+
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 35/297 (11%)
Query: 47 CAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLS 100
A Y E + A + + R +GQG G VY + VA+K ++ +
Sbjct: 1 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 60
Query: 101 N--AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------ 152
ASV+K + ++V +LG +++ E + L YL
Sbjct: 61 ERIEFLNEASVMKEFNCH---HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 117
Query: 153 NNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212
NN + ++ +++A A G+ YL+ A +H + A N ++ E F ++ D+G+
Sbjct: 118 NNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGM 174
Query: 213 S---FLAPEEKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ + ++G G + + + G T SDV+ FGVVL EI + + +GL
Sbjct: 175 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 234
Query: 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323
+ L + E LLD P + L+R+ C + K RPS +++ +
Sbjct: 235 SNEQVLRFVME---GGLLDKPDNCPDMLFELMRM------CWQYNPKMRPSFLEIIS 282
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 39/219 (17%)
Query: 60 TDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQ 117
+D + +R++G+G G V TG+ AVK I R V ++ L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW--NRRLRIATGAAR- 174
HPNI+ + F + G +V E G L D +R+ AAR
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYT-------------GGELFDEIISRKRFSEVDAARI 154
Query: 175 ------GLEYLHQGVAPNIIHGCIKASNILLNEKFCA---RVCDYGLS--FLAP---EEK 220
G+ Y+H+ I+H +K N+LL K R+ D+GLS F A ++K
Sbjct: 155 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 211
Query: 221 RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
G A Y+ + H G + DV+ GV+L +LSG
Sbjct: 212 IGTAYYIAPEVLH----GTYDEKCDVWSTGVILYILLSG 246
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 107/267 (40%), Gaps = 39/267 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
+G+G G V + +G+++AVKRI + + ++ P V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
G+ I E ++ SLD + + D + + +IA + LE+LH ++ +
Sbjct: 75 LFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 131
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG--------- 238
IH +K SN+L+N ++CD+G+S GY+ DD + G
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGIS-----------GYLVDDVAKDIDAGCKPYMAPER 180
Query: 239 --------NATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290
+ +SD++ G+ ++E+ R + W P + + E P+L
Sbjct: 181 INPELNQKGYSVKSDIWSLGITMIELAILRFPYDS----WGTPFQQLKQVVEEPSPQL-- 234
Query: 291 PCEIKPLVRLAKVALACVGNSRKNRPS 317
P + K C+ + K RP+
Sbjct: 235 PAD-KFSAEFVDFTSQCLKKNSKERPT 260
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 39/219 (17%)
Query: 60 TDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQ 117
+D + +R++G+G G V TG+ AVK I R V ++ L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW--NRRLRIATGAAR- 174
HPNI+ + F + G +V E G L D +R+ AAR
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYT-------------GGELFDEIISRKRFSEVDAARI 155
Query: 175 ------GLEYLHQGVAPNIIHGCIKASNILLNEKFCA---RVCDYGLS--FLAP---EEK 220
G+ Y+H+ I+H +K N+LL K R+ D+GLS F A ++K
Sbjct: 156 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 212
Query: 221 RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
G A Y+ + H G + DV+ GV+L +LSG
Sbjct: 213 IGTAYYIAPEVLH----GTYDEKCDVWSTGVILYILLSG 247
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ---H 118
FS R IG G G VY A + ++VA+K++ SN + +IK + Q H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW--QDIIKEVRFLQKLRH 74
Query: 119 PNIVPILGFSQAPGERIIVSEF-INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
PN + G +V E+ + AS +H+ L + GA +GL
Sbjct: 75 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP-----LQEVEIAAVTHGALQGLA 129
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG-LSFLAPEEKRGLAGYVDDDYWHEK- 235
YLH + N+IH +KA NILL+E ++ D+G S +AP +V YW
Sbjct: 130 YLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-----FVGTPYWMAPE 181
Query: 236 -----GGGNATRESDVYGFGVVLLEI 256
G + DV+ G+ +E+
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 40/231 (17%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG+GR G V+ G+ VAVK A + + I L +H NI LGF
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVF---FTTEEASWFRETEIYQTVLMRHENI---LGFI 97
Query: 129 QAP-------GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
A + +++++ SL YL ++ LD L++A + GL +LH
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYLK-----STTLDAKSMLKLAYSSVSGLCHLHT 152
Query: 182 GV-----APNIIHGCIKASNILLNEKFCARVCDYGLSF----------LAPEEKRGLAGY 226
+ P I H +K+ NIL+ + + D GL+ + P + G Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 227 VDDDYWHEKGGGNATRE---SDVYGFGVVLLEILSGRRCEEGLLV-KWALP 273
+ + E N + +D+Y FG++L E+ RRC G +V ++ LP
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLP 261
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 57/295 (19%)
Query: 67 RIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGF----GFASVIKTLS-LAQHPN 120
+ +G G G V A GK AV ++ +++ S A S +K +S L QH N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 121 IVPILGFSQAPGERIIVSEF------INM------ASLDFYLHENNDGASLLDWNRRLRI 168
IV +LG G ++++E+ +N L++ + +++ L L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD 228
++ A+G+ +L + N IH + A N+LL A++ D+GL+ R + ++
Sbjct: 172 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA-------RDI---MN 218
Query: 229 DDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL 272
D + KG T +SDV+ +G++L EI S G G+LV
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 278
Query: 273 -PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326
L+K+ ++ P A P I +++ AC +RP+ Q+ + L
Sbjct: 279 YKLVKDGY--QMAQPAFA-PKNIYSIMQ------ACWALEPTHRPTFQQICSFLQ 324
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 80/202 (39%), Gaps = 10/202 (4%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLAQH 118
D F R +G+G+ G VY A K + ++ + L G I+ S +H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEY 178
PNI+ + + ++ EF L L ++ D R A L Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELADALHY 129
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG 237
H+ +IH IK N+L+ K ++ D+G S AP +R + G +D G
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 238 GNATRESDVYGFGVVLLEILSG 259
+ D++ GV+ E L G
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 80/202 (39%), Gaps = 10/202 (4%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLAQH 118
D F R +G+G+ G VY A K + ++ + L G I+ S +H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEY 178
PNI+ + + ++ EF L L ++ D R A L Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELADALHY 129
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG 237
H+ +IH IK N+L+ K ++ D+G S AP +R + G +D G
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 238 GNATRESDVYGFGVVLLEILSG 259
+ D++ GV+ E L G
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 80/202 (39%), Gaps = 10/202 (4%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLAQH 118
D F R +G+G+ G VY A K + ++ + L G I+ S +H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEY 178
PNI+ + + ++ EF L L ++ D R A L Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELADALHY 130
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRGLAGYVDDDYWHEKGG 237
H+ +IH IK N+L+ K ++ D+G S AP +R + G +D G
Sbjct: 131 CHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEG 187
Query: 238 GNATRESDVYGFGVVLLEILSG 259
+ D++ GV+ E L G
Sbjct: 188 KTHDEKVDLWCAGVLCYEFLVG 209
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 120/299 (40%), Gaps = 61/299 (20%)
Query: 69 IGQGRLGTVYAA----LL--STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+G+G G V+ A LL LVAVK + + +A F + L++ QH +IV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAELLTMLQHQHIV 83
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLL-----------DWNRRLRIATG 171
G ++V E++ L+ +L + A LL + L +A+
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 172 AARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDY 231
A G+ YL + +H + N L+ + ++ D+G+S R + Y D Y
Sbjct: 144 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMS-------RDI--YSTDYY 191
Query: 232 WHEKGGGNA-----------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALP 273
+ GG T ESDV+ FGVVL EI + G++ L A+
Sbjct: 192 ---RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 248
Query: 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
I + R EL PR A P E+ ++R C + R SI V L L P
Sbjct: 249 CITQGR--ELERPR-ACPPEVYAIMR------GCWQREPQQRHSIKDVHARLQALAQAP 298
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 13/194 (6%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G+ G V+ VA+K I + A V+ LS HP +V + G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS---HPKLVQLYGVC 72
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
+V+EF+ L YL L L + G+ YL + +I
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEKGGGNATR---ES 244
H + A N L+ E +V D+G++ F+ ++ G W + +R +S
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 245 DVYGFGVVLLEILS 258
DV+ FGV++ E+ S
Sbjct: 187 DVWSFGVLMWEVFS 200
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 120/299 (40%), Gaps = 61/299 (20%)
Query: 69 IGQGRLGTVYAA----LL--STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+G+G G V+ A LL LVAVK + + +A F + L++ QH +IV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAELLTMLQHQHIV 77
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLL-----------DWNRRLRIATG 171
G ++V E++ L+ +L + A LL + L +A+
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 172 AARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDY 231
A G+ YL + +H + N L+ + ++ D+G+S R + Y D Y
Sbjct: 138 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMS-------RDI--YSTDYY 185
Query: 232 WHEKGGGNA-----------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALP 273
+ GG T ESDV+ FGVVL EI + G++ L A+
Sbjct: 186 ---RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 242
Query: 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
I + R EL PR A P E+ ++R C + R SI V L L P
Sbjct: 243 CITQGR--ELERPR-ACPPEVYAIMR------GCWQREPQQRHSIKDVHARLQALAQAP 292
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 116/296 (39%), Gaps = 59/296 (19%)
Query: 66 RRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
+R +G+G G V+ A LVAVK + + NA F + L+ QH
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTL--KDASDNARKDFHREAELLTNLQHE 75
Query: 120 NIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASL---------LDWNRRLRIAT 170
+IV G I+V E++ L+ +L + A L L ++ L IA
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 171 GAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD 230
A G+ YL + + +H + N L+ E ++ D+G+S D
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMS----------RDVYSTD 182
Query: 231 YWHEKGGGNA-----------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL 272
Y+ + GG+ T ESDV+ GVVL EI + G++ L +
Sbjct: 183 YY--RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 240
Query: 273 PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
I + R L PR P E+ L+ L C R +I + T+L NL
Sbjct: 241 ECITQGRV--LQRPR-TCPQEVYELM------LGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFG-FASVIKTLSLAQHPNIVPI 124
+ +G+G G V A +TG+ VA+K I+ +++ + G I L L +HP+I+ +
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVA 184
++ E I+V E+ D+ + + + R +EY H+
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHRH-- 122
Query: 185 PNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK---GGGNAT 241
I+H +K N+LL+E ++ D+GLS + + +Y + G A
Sbjct: 123 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 242 RESDVYGFGVVLLEILSGR 260
E DV+ GV+L +L R
Sbjct: 182 PEVDVWSCGVILYVMLCRR 200
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 120/299 (40%), Gaps = 61/299 (20%)
Query: 69 IGQGRLGTVYAA----LL--STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+G+G G V+ A LL LVAVK + + +A F + L++ QH +IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAELLTMLQHQHIV 106
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLL-----------DWNRRLRIATG 171
G ++V E++ L+ +L + A LL + L +A+
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 172 AARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDY 231
A G+ YL + +H + N L+ + ++ D+G+S R + Y D Y
Sbjct: 167 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMS-------RDI--YSTDYY 214
Query: 232 WHEKGGGNA-----------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALP 273
+ GG T ESDV+ FGVVL EI + G++ L A+
Sbjct: 215 ---RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 271
Query: 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
I + R EL PR A P E+ ++R C + R SI V L L P
Sbjct: 272 CITQGR--ELERPR-ACPPEVYAIMR------GCWQREPQQRHSIKDVHARLQALAQAP 321
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFG-FASVIKTLSLAQHPNIVPI 124
+ +G+G G V A +TG+ VA+K I+ +++ + G I L L +HP+I+ +
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVA 184
++ E I+V E+ D+ + + + R +EY H+
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHRH-- 126
Query: 185 PNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK---GGGNAT 241
I+H +K N+LL+E ++ D+GLS + + +Y + G A
Sbjct: 127 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 242 RESDVYGFGVVLLEILSGR 260
E DV+ GV+L +L R
Sbjct: 186 PEVDVWSCGVILYVMLCRR 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFG-FASVIKTLSLAQHPNIVPI 124
+ +G+G G V A +TG+ VA+K I+ +++ + G I L L +HP+I+ +
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVA 184
++ E I+V E+ D+ + + + R +EY H+
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHRH-- 132
Query: 185 PNIIHGCIKASNILLNEKFCARVCDYGLS 213
I+H +K N+LL+E ++ D+GLS
Sbjct: 133 -KIVHRDLKPENLLLDEHLNVKIADFGLS 160
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFG-FASVIKTLSLAQHPNIVPI 124
+ +G+G G V A +TG+ VA+K I+ +++ + G I L L +HP+I+ +
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVA 184
++ E I+V E+ D+ + + + R +EY H+
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHRH-- 131
Query: 185 PNIIHGCIKASNILLNEKFCARVCDYGLS 213
I+H +K N+LL+E ++ D+GLS
Sbjct: 132 -KIVHRDLKPENLLLDEHLNVKIADFGLS 159
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 123/302 (40%), Gaps = 64/302 (21%)
Query: 67 RIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGF----GFASVIKTLS-LAQHPN 120
+ +G G G V A GK AV ++ +++ S A S +K +S L QH N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASL----------------LD 161
IV +LG G ++++E+ L +L + G SL L+
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR 221
L ++ A+G+ +L + N IH + A N+LL A++ D+GL+
Sbjct: 157 LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA-------- 205
Query: 222 GLAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEG 265
++D + KG T +SDV+ +G++L EI S G G
Sbjct: 206 --RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 263
Query: 266 LLVKWAL-PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324
+LV L+K+ ++ P A P I +++ AC +RP+ Q+ +
Sbjct: 264 ILVNSKFYKLVKDGY--QMAQPAFA-PKNIYSIMQ------ACWALEPTHRPTFQQICSF 314
Query: 325 LN 326
L
Sbjct: 315 LQ 316
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 59
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++M DF G L L +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL---FQLLQ 116
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 17/256 (6%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
+G+G G V + +G+++AVKRI + + ++ P V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
G+ I E ++ SLD + + D + + +IA + LE+LH ++ +
Sbjct: 119 LFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 175
Query: 188 IHGCIKASNILLNEKFCARVCDYGLS-----FLAPEEKRGLAGYVDDDYWH-EKGGGNAT 241
IH +K SN+L+N ++CD+G+S +A G Y+ + + E +
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYS 235
Query: 242 RESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLA 301
+SD++ G+ ++E+ R + W P + + E P+L P + K
Sbjct: 236 VKSDIWSLGITMIELAILRFPYDS----WGTPFQQLKQVVEEPSPQL--PAD-KFSAEFV 288
Query: 302 KVALACVGNSRKNRPS 317
C+ + K RP+
Sbjct: 289 DFTSQCLKKNSKERPT 304
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 60
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++M DF G L L +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL---FQLLQ 117
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 20/259 (7%)
Query: 69 IGQGRLGTVYAALLSTGKL-VAVKRIH-PRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G + TVY A + + VA+K I P F + S H NIV ++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186
+ +V E+I +L Y+ + L + + G+++ H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQILDGIKHAHDM---R 131
Query: 187 IIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYV--DDDYWH-EKGGGNATRE 243
I+H IK NIL++ ++ D+G++ E +V Y+ E+ G AT E
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 244 -SDVYGFGVVLLEILSGRRCEEG-LLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLA 301
+D+Y G+VL E+L G G V A+ I++ + D R IP L+
Sbjct: 192 CTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQ------SLS 245
Query: 302 KVALACVGNSRKNRPSIVQ 320
V L + NR +Q
Sbjct: 246 NVILRATEKDKANRYKTIQ 264
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 66 RRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVL-SNAGFGFASVIKTLSLAQHPNIVP 123
R +G+G G V A T + VA+K I +L+ S+ I L L +HP+I+
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ P + ++V E+ D+ + + D RR A +EY H+
Sbjct: 74 LYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTE---DEGRRFFQQIICA--IEYCHRH- 127
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-----EKRGLAGYVDDDYWHEKGGG 238
I+H +K N+LL++ ++ D+GLS + + G Y + + G
Sbjct: 128 --KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIN--GKL 183
Query: 239 NATRESDVYGFGVVLLEILSGR 260
A E DV+ G+VL +L GR
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGR 205
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 20/236 (8%)
Query: 33 KKPVESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVK 91
+K +ES++ + C + I + FS RIIG+G G VY + TGK+ A+K
Sbjct: 163 QKFIESDKF--TRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 220
Query: 92 RIHPRLVLSNAGFGFA----SVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLD 147
+ + + G A ++ +S P IV + P + + + +N L
Sbjct: 221 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH 280
Query: 148 FYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARV 207
++L ++ + + R A GLE++H +++ +K +NILL+E R+
Sbjct: 281 YHLSQH---GVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRI 333
Query: 208 CDYGL----SFLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
D GL S P G GY+ + + +++ +D + G +L ++L G
Sbjct: 334 SDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 20/236 (8%)
Query: 33 KKPVESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVK 91
+K +ES++ + C + I + FS RIIG+G G VY + TGK+ A+K
Sbjct: 163 QKFIESDKF--TRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 220
Query: 92 RIHPRLVLSNAGFGFA----SVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLD 147
+ + + G A ++ +S P IV + P + + + +N L
Sbjct: 221 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH 280
Query: 148 FYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARV 207
++L ++ + + R A GLE++H +++ +K +NILL+E R+
Sbjct: 281 YHLSQH---GVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRI 333
Query: 208 CDYGL----SFLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
D GL S P G GY+ + + +++ +D + G +L ++L G
Sbjct: 334 SDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRG 387
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 13/194 (6%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G+ G V+ VA+K I + A V+ LS HP +V + G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS---HPKLVQLYGVC 71
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
+V EF+ L YL L L + G+ YL + ++I
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEA---SVI 125
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEKGGGNATR---ES 244
H + A N L+ E +V D+G++ F+ ++ G W + +R +S
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 245 DVYGFGVVLLEILS 258
DV+ FGV++ E+ S
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 69 IGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G+V + +G+++AVKRI + + + + P IV G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
G+ I E ++ + FY + + ++ +I + L +L + + I
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KI 147
Query: 188 IHGCIKASNILLNEKFCARVCDYGLS-----FLAPEEKRGLAGYVDDDYWHEKGGGNATR 242
IH IK SNILL+ ++CD+G+S +A G Y+ E+ +A+R
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMA----PERIDPSASR 203
Query: 243 E-----SDVYGFGVVLLEILSGR 260
+ SDV+ G+ L E+ +GR
Sbjct: 204 QGYDVRSDVWSLGITLYELATGR 226
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 20/236 (8%)
Query: 33 KKPVESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVK 91
+K +ES++ + C + I + FS RIIG+G G VY + TGK+ A+K
Sbjct: 162 QKFIESDKF--TRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 219
Query: 92 RIHPRLVLSNAGFGFA----SVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLD 147
+ + + G A ++ +S P IV + P + + + +N L
Sbjct: 220 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH 279
Query: 148 FYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARV 207
++L ++ + + R A GLE++H +++ +K +NILL+E R+
Sbjct: 280 YHLSQH---GVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRI 332
Query: 208 CDYGL----SFLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
D GL S P G GY+ + + +++ +D + G +L ++L G
Sbjct: 333 SDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 20/236 (8%)
Query: 33 KKPVESEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVK 91
+K +ES++ + C + I + FS RIIG+G G VY + TGK+ A+K
Sbjct: 163 QKFIESDKF--TRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 220
Query: 92 RIHPRLVLSNAGFGFA----SVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLD 147
+ + + G A ++ +S P IV + P + + + +N L
Sbjct: 221 CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH 280
Query: 148 FYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARV 207
++L ++ + + R A GLE++H +++ +K +NILL+E R+
Sbjct: 281 YHLSQH---GVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRI 333
Query: 208 CDYGL----SFLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
D GL S P G GY+ + + +++ +D + G +L ++L G
Sbjct: 334 SDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRG 387
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 90/219 (41%), Gaps = 39/219 (17%)
Query: 60 TDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQ 117
+D + +R++G+G G V TG+ AVK I R V ++ L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW--NRRLRIATGAAR- 174
HPNI + F + G +V E G L D +R+ AAR
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYT-------------GGELFDEIISRKRFSEVDAARI 131
Query: 175 ------GLEYLHQGVAPNIIHGCIKASNILLNEKFCA---RVCDYGLS--FLAPE---EK 220
G+ Y H+ I+H +K N+LL K R+ D+GLS F A + +K
Sbjct: 132 IRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK 188
Query: 221 RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
G A Y+ + H G + DV+ GV+L +LSG
Sbjct: 189 IGTAYYIAPEVLH----GTYDEKCDVWSTGVILYILLSG 223
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 13/194 (6%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G+ G V+ VA+K I + A V+ LS HP +V + G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS---HPKLVQLYGVC 71
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
+V EF+ L YL L L + G+ YL + +I
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEKGGGNATR---ES 244
H + A N L+ E +V D+G++ F+ ++ G W + +R +S
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 245 DVYGFGVVLLEILS 258
DV+ FGV++ E+ S
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 13/194 (6%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G+ G V+ VA+K I + A V+ LS HP +V + G
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS---HPKLVQLYGVC 69
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
+V EF+ L YL L L + G+ YL + +I
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEKGGGNATR---ES 244
H + A N L+ E +V D+G++ F+ ++ G W + +R +S
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 245 DVYGFGVVLLEILS 258
DV+ FGV++ E+ S
Sbjct: 184 DVWSFGVLMWEVFS 197
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 13/194 (6%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G+ G V+ VA+K I + + A V+ LS HP +V + G
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLS---HPKLVQLYGVC 91
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
+V EF+ L YL L L + G+ YL + +I
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEKGGGNATR---ES 244
H + A N L+ E +V D+G++ F+ ++ G W + +R +S
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 245 DVYGFGVVLLEILS 258
DV+ FGV++ E+ S
Sbjct: 206 DVWSFGVLMWEVFS 219
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG+GR G V+ G+ VAVK R + F A + +T+ L +H NI LGF
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVML-RHENI---LGFI 63
Query: 129 QAPG-------ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
A + +VS++ SL YL+ + +++A A GL +LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 118
Query: 182 GVA-----PNIIHGCIKASNILLNEKFCARVCDYGLSF----------LAPEE----KRG 222
+ P I H +K+ NIL+ + + D GL+ +AP KR
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265
+A V DD + K + R +D+Y G+V EI RRC G
Sbjct: 179 MAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEI--ARRCSIG 218
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 13/194 (6%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG G+ G V+ VA+K I + A V+ LS HP +V + G
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS---HPKLVQLYGVC 74
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
+V EF+ L YL L L + G+ YL + +I
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEKGGGNATR---ES 244
H + A N L+ E +V D+G++ F+ ++ G W + +R +S
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 245 DVYGFGVVLLEILS 258
DV+ FGV++ E+ S
Sbjct: 189 DVWSFGVLMWEVFS 202
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG+GR G V+ G+ VAVK R + F A + +T+ L +H NI LGF
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVML-RHENI---LGFI 64
Query: 129 QAPG-------ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
A + +VS++ SL YL+ + +++A A GL +LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 119
Query: 182 GVA-----PNIIHGCIKASNILLNEKFCARVCDYGLSF----------LAPEE----KRG 222
+ P I H +K+ NIL+ + + D GL+ +AP KR
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265
+A V DD + K + R +D+Y G+V EI RRC G
Sbjct: 180 MAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEI--ARRCSIG 219
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG+GR G V+ G+ VAVK R + F A + +T+ L +H NI LGF
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVML-RHENI---LGFI 89
Query: 129 QAPG-------ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
A + +VS++ SL YL+ + +++A A GL +LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 144
Query: 182 GVA-----PNIIHGCIKASNILLNEKFCARVCDYGLSF----------LAPEE----KRG 222
+ P I H +K+ NIL+ + + D GL+ +AP KR
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265
+A V DD + K + R +D+Y G+V EI RRC G
Sbjct: 205 MAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEI--ARRCSIG 244
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG+GR G V+ G+ VAVK R + F A + +T+ L +H NI LGF
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVML-RHENI---LGFI 102
Query: 129 QAPG-------ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
A + +VS++ SL YL+ + +++A A GL +LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 157
Query: 182 GVA-----PNIIHGCIKASNILLNEKFCARVCDYGLSF----------LAPEE----KRG 222
+ P I H +K+ NIL+ + + D GL+ +AP KR
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265
+A V DD + K + R +D+Y G+V EI RRC G
Sbjct: 218 MAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEI--ARRCSIG 257
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG+GR G V+ G+ VAVK R + F A + +T+ L +H NI LGF
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVML-RHENI---LGFI 66
Query: 129 QAPG-------ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
A + +VS++ SL YL+ + +++A A GL +LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 121
Query: 182 GVA-----PNIIHGCIKASNILLNEKFCARVCDYGLSF----------LAPEE----KRG 222
+ P I H +K+ NIL+ + + D GL+ +AP KR
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265
+A V DD + K + R +D+Y G+V EI RRC G
Sbjct: 182 MAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEI--ARRCSIG 221
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
IG+GR G V+ G+ VAVK R + F A + +T+ L +H NI LGF
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVML-RHENI---LGFI 69
Query: 129 QAPG-------ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
A + +VS++ SL YL+ + +++A A GL +LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 124
Query: 182 GVA-----PNIIHGCIKASNILLNEKFCARVCDYGLSF----------LAPEE----KRG 222
+ P I H +K+ NIL+ + + D GL+ +AP KR
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265
+A V DD + K + R +D+Y G+V EI RRC G
Sbjct: 185 MAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEI--ARRCSIG 224
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 104/240 (43%), Gaps = 33/240 (13%)
Query: 100 SNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASL 159
S + F AS++ LS H ++V G E I+V EF+ SLD YL +N + ++
Sbjct: 56 SESFFEAASMMSKLS---HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINI 112
Query: 160 LDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILL---------NEKFCARVCDY 210
L W +L +A A + +L + +IHG + A NILL N F ++ D
Sbjct: 113 L-W--KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFI-KLSDP 165
Query: 211 GLSF--LAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV 268
G+S L + + +V + + N +D + FG L EI SG G
Sbjct: 166 GISITVLPKDILQERIPWVPPECI--ENPKNLNLATDKWSFGTTLWEICSG-----GDKP 218
Query: 269 KWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
AL ++++F E R +P LA + C+ +RPS + LN+L
Sbjct: 219 LSALDSQRKLQFYE---DRHQLPA--PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH 118
F+ R++G+G G+V A L VAVK + ++ S+ F + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 119 PNIVPILGFS---QAPGER---IIVSEFINMASLDFYLHENNDGASL--LDWNRRLRIAT 170
P++ ++G S +A G +++ F+ L +L + G + L +R
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 171 GAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS---FLAPEEKRGLAGYV 227
A G+EYL + N IH + A N +L E V D+GLS + ++G A +
Sbjct: 145 DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 228 DDDYWHEKGGGNA--TRESDVYGFGVVLLEILS 258
+ + + T SDV+ FGV + EI++
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 49/249 (19%)
Query: 63 FSHRRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFA-SVIKTLSLAQHPN 120
F + +++G+G G V +TG+ A+K + ++++ + + L ++HP
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 212
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
+ + Q V E+ N L F+L + +R L+YLH
Sbjct: 213 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLH 268
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGL------------------SFLAPEEKRG 222
N+++ +K N++L++ ++ D+GL +LAPE
Sbjct: 269 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE---- 322
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR-----RCEEGLLVKWALPLIKE 277
D+DY R D +G GVV+ E++ GR + E L L L++E
Sbjct: 323 --VLEDNDY---------GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---ELILMEE 368
Query: 278 MRFSELLDP 286
+RF L P
Sbjct: 369 IRFPRTLGP 377
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 49/249 (19%)
Query: 63 FSHRRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFA-SVIKTLSLAQHPN 120
F + +++G+G G V +TG+ A+K + ++++ + + L ++HP
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
+ + Q V E+ N L F+L + +R L+YLH
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLH 265
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGL------------------SFLAPEEKRG 222
N+++ +K N++L++ ++ D+GL +LAPE
Sbjct: 266 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE---- 319
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR-----RCEEGLLVKWALPLIKE 277
D+DY R D +G GVV+ E++ GR + E L L L++E
Sbjct: 320 --VLEDNDY---------GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---ELILMEE 365
Query: 278 MRFSELLDP 286
+RF L P
Sbjct: 366 IRFPRTLGP 374
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 49/249 (19%)
Query: 63 FSHRRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFA-SVIKTLSLAQHPN 120
F + +++G+G G V +TG+ A+K + ++++ + + L ++HP
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 70
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
+ + Q V E+ N L F+L + +R L+YLH
Sbjct: 71 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLH 126
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGL------------------SFLAPEEKRG 222
N+++ +K N++L++ ++ D+GL +LAPE
Sbjct: 127 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE- 183
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR-----RCEEGLLVKWALPLIKE 277
D+DY R D +G GVV+ E++ GR + E L + L L++E
Sbjct: 184 -----DNDY---------GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FELILMEE 226
Query: 278 MRFSELLDP 286
+RF L P
Sbjct: 227 IRFPRTLGP 235
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 49/249 (19%)
Query: 63 FSHRRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFA-SVIKTLSLAQHPN 120
F + +++G+G G V +TG+ A+K + ++++ + + L ++HP
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
+ + Q V E+ N L F+L + +R L+YLH
Sbjct: 72 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLH 127
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGL------------------SFLAPEEKRG 222
N+++ +K N++L++ ++ D+GL +LAPE
Sbjct: 128 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE- 184
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR-----RCEEGLLVKWALPLIKE 277
D+DY R D +G GVV+ E++ GR + E L + L L++E
Sbjct: 185 -----DNDY---------GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FELILMEE 227
Query: 278 MRFSELLDP 286
+RF L P
Sbjct: 228 IRFPRTLGP 236
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 61 DGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
D F R+ GQG GTV STG VA+K++ N +++ L++ HP
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL---QIMQDLAVLHHP 79
Query: 120 NIVPILGFSQAPGERIIVSEFIN--MASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NIV + + GER ++N M + LH ++ RR ++A
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHR-----CCRNYYRR-QVAPPPILIKV 133
Query: 178 YLHQGV---------APNIIHGCIKASNILLNE-KFCARVCDYGLS-FLAPEEKRGLAGY 226
+L Q + + N+ H IK N+L+NE ++CD+G + L+P E Y
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN--VAY 191
Query: 227 VDDDYWHEK----GGGNATRESDVYGFGVVLLEILSG 259
+ Y+ G + T D++ G + E++ G
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 49/249 (19%)
Query: 63 FSHRRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFA-SVIKTLSLAQHPN 120
F + +++G+G G V +TG+ A+K + ++++ + + L ++HP
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
+ + Q V E+ N L F+L + +R L+YLH
Sbjct: 70 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLH 125
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGL------------------SFLAPEEKRG 222
N+++ +K N++L++ ++ D+GL +LAPE
Sbjct: 126 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE- 182
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR-----RCEEGLLVKWALPLIKE 277
D+DY R D +G GVV+ E++ GR + E L + L L++E
Sbjct: 183 -----DNDY---------GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FELILMEE 225
Query: 278 MRFSELLDP 286
+RF L P
Sbjct: 226 IRFPRTLGP 234
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 104/240 (43%), Gaps = 33/240 (13%)
Query: 100 SNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASL 159
S + F AS++ LS H ++V G E I+V EF+ SLD YL +N + ++
Sbjct: 56 SESFFEAASMMSKLS---HKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINI 112
Query: 160 LDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILL---------NEKFCARVCDY 210
L W +L +A A + +L + +IHG + A NILL N F ++ D
Sbjct: 113 L-W--KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFI-KLSDP 165
Query: 211 GLSF--LAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV 268
G+S L + + +V + + N +D + FG L EI SG G
Sbjct: 166 GISITVLPKDILQERIPWVPPECI--ENPKNLNLATDKWSFGTTLWEICSG-----GDKP 218
Query: 269 KWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
AL ++++F E R +P LA + C+ +RPS + LN+L
Sbjct: 219 LSALDSQRKLQFYE---DRHQLPA--PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 120/314 (38%), Gaps = 46/314 (14%)
Query: 38 SEETLPIKLCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRL 97
S + P K + L E D + +IG+GR G VY VA++ I
Sbjct: 10 SARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE--VAIRLIDIER 67
Query: 98 VLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGA 157
+ F + +H N+V +G +P I++ +L + D
Sbjct: 68 DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV---RDAK 124
Query: 158 SLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG------ 211
+LD N+ +IA +G+ YLH A I+H +K+ N+ + + D+G
Sbjct: 125 IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSISG 180
Query: 212 -----------------LSFLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLL 254
L LAPE R L+ ++D ++ SDV+ G +
Sbjct: 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEED------KLPFSKHSDVFALGTIWY 234
Query: 255 EILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKN 314
E L R E + A +I +M + P L+ +I ++ + L C ++
Sbjct: 235 E-LHAR--EWPFKTQPAEAIIWQM--GTGMKPNLS---QIGMGKEISDILLFCWAFEQEE 286
Query: 315 RPSIVQVATILNNL 328
RP+ ++ +L L
Sbjct: 287 RPTFTKLMDMLEKL 300
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ DYGL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 90/241 (37%), Gaps = 56/241 (23%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
D +IG+GR G VY L + VAVK + F I + L +H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDE-RPVAVKVFS---FANRQNFINEKNIYRVPLMEHDN 68
Query: 121 IVP-ILGFSQAPG----ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARG 175
I I+G + E ++V E+ SL YL + DW R+A RG
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRG 123
Query: 176 LEYLHQGV------APNIIHGCIKASNILLNEKFCARVCDYGLS---------------- 213
L YLH + P I H + + N+L+ + D+GLS
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 214 ----------FLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCE 263
++APE G D + +A ++ D+Y G++ EI RC
Sbjct: 184 AAISEVGTIRYMAPEVLEGAVNLRDXE--------SALKQVDMYALGLIYWEIFM--RCT 233
Query: 264 E 264
+
Sbjct: 234 D 234
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHP 119
++ + IG+G G V +A K VA+K+I P + + ++ I+ L +H
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP---FEHQTYCQRTLREIQILLRFRHE 101
Query: 120 NIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
N++ I +A + +I ++ L++ L + + RGL+Y+
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN-DHICYFLYQILRGLKYI 160
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-PE-EKRGLAGYVDDDYWHEK-- 235
H N++H +K SN+L+N ++CD+GL+ +A PE + G W+
Sbjct: 161 HSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 236 ---GGGNATRESDVYGFGVVLLEILSGR 260
T+ D++ G +L E+LS R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 34/267 (12%)
Query: 44 IKLCAFAYPLTEIDAATD--GFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN 101
IK A + + E D F +++GQG G V+ +G ++++ VL
Sbjct: 6 IKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGS--DARQLYAMKVLKK 63
Query: 102 AGFGFASVIKT------LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND 155
A ++T L HP IV + Q G+ ++ +F+ L L +
Sbjct: 64 ATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-- 121
Query: 156 GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215
+ + + +A A L++LH + II+ +K NILL+E+ ++ D+GLS
Sbjct: 122 -VMFTEEDVKFYLAE-LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 176
Query: 216 APEEKR------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVK 269
+ + ++ G Y+ + + +G T+ +D + FGV++ E+L+G +G K
Sbjct: 177 SIDHEKKAYSFCGTVEYMAPEVVNRRG---HTQSADWWSFGVLMFEMLTGTLPFQGKDRK 233
Query: 270 WALPLIKEMRFSELLDPRLAIPCEIKP 296
+ +I L +L +P + P
Sbjct: 234 ETMTMI--------LKAKLGMPQFLSP 252
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQ 117
+D + I+G G + V+ A L + VAVK + L + + F + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 118 HPNIVPI--LGFSQAPGERI--IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
HP IV + G ++ P + IV E+++ +L +H + R + + A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADAC 126
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR---------GLA 224
+ L + HQ IIH +K +NIL++ +V D+G++ + G A
Sbjct: 127 QALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 225 GYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
Y+ + + G + SDVY G VL E+L+G
Sbjct: 184 QYLSPE---QARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 57
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ DF G L L +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYL---FQLLQ 114
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 115 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA 150
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 34/267 (12%)
Query: 44 IKLCAFAYPLTEIDAATD--GFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN 101
IK A + + E D F +++GQG G V+ +G ++++ VL
Sbjct: 5 IKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGS--DARQLYAMKVLKK 62
Query: 102 AGFGFASVIKT------LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND 155
A ++T L HP IV + Q G+ ++ +F+ L L +
Sbjct: 63 ATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-- 120
Query: 156 GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215
+ + + +A A L++LH + II+ +K NILL+E+ ++ D+GLS
Sbjct: 121 -VMFTEEDVKFYLAE-LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175
Query: 216 APEEKR------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVK 269
+ + ++ G Y+ + + +G T+ +D + FGV++ E+L+G +G K
Sbjct: 176 SIDHEKKAYSFCGTVEYMAPEVVNRRG---HTQSADWWSFGVLMFEMLTGTLPFQGKDRK 232
Query: 270 WALPLIKEMRFSELLDPRLAIPCEIKP 296
+ +I L +L +P + P
Sbjct: 233 ETMTMI--------LKAKLGMPQFLSP 251
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 65/309 (21%)
Query: 63 FSHRRIIGQGRLG-----TVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASVIKTLS-L 115
S + +G G G T Y + S + VAVK + P L+ S +K LS L
Sbjct: 48 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE-ALMSELKVLSYL 106
Query: 116 AQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDG--------------ASLLD 161
H NIV +LG G ++++E+ L +L D LD
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR 221
L + A+G+ +L + N IH + A NILL ++CD+GL+ + +
Sbjct: 167 LEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLA----RDIK 219
Query: 222 GLAGYVDDDYWHEKGGGNA-----------------TRESDVYGFGVVLLEILS-GRRCE 263
+ YV GNA T ESDV+ +G+ L E+ S G
Sbjct: 220 NDSNYVVK--------GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 271
Query: 264 EGLLVKWAL-PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVA 322
G+ V +IKE +L P A P E+ +++ C RP+ Q+
Sbjct: 272 PGMPVDSKFYKMIKEG--FRMLSPEHA-PAEMYDIMK------TCWDADPLKRPTFKQIV 322
Query: 323 TILNNLVGD 331
++ + +
Sbjct: 323 QLIEKQISE 331
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 65/309 (21%)
Query: 63 FSHRRIIGQGRLG-----TVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASVIKTLS-L 115
S + +G G G T Y + S + VAVK + P L+ S +K LS L
Sbjct: 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE-ALMSELKVLSYL 83
Query: 116 AQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDG--------------ASLLD 161
H NIV +LG G ++++E+ L +L D LD
Sbjct: 84 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143
Query: 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR 221
L + A+G+ +L + N IH + A NILL ++CD+GL+ + +
Sbjct: 144 LEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLA----RDIK 196
Query: 222 GLAGYVDDDYWHEKGGGNA-----------------TRESDVYGFGVVLLEILS-GRRCE 263
+ YV GNA T ESDV+ +G+ L E+ S G
Sbjct: 197 NDSNYVVK--------GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 248
Query: 264 EGLLVKWAL-PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVA 322
G+ V +IKE +L P A P E+ +++ C RP+ Q+
Sbjct: 249 PGMPVDSKFYKMIKEG--FRMLSPEHA-PAEMYDIMK------TCWDADPLKRPTFKQIV 299
Query: 323 TILNNLVGD 331
++ + +
Sbjct: 300 QLIEKQISE 308
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 65/309 (21%)
Query: 63 FSHRRIIGQGRLG-----TVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASVIKTLS-L 115
S + +G G G T Y + S + VAVK + P L+ S +K LS L
Sbjct: 41 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE-ALMSELKVLSYL 99
Query: 116 AQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDG--------------ASLLD 161
H NIV +LG G ++++E+ L +L D LD
Sbjct: 100 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 159
Query: 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR 221
L + A+G+ +L + N IH + A NILL ++CD+GL+ + +
Sbjct: 160 LEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLA----RDIK 212
Query: 222 GLAGYVDDDYWHEKGGGNA-----------------TRESDVYGFGVVLLEILS-GRRCE 263
+ YV GNA T ESDV+ +G+ L E+ S G
Sbjct: 213 NDSNYVVK--------GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 264
Query: 264 EGLLVKWAL-PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVA 322
G+ V +IKE +L P A P E+ +++ C RP+ Q+
Sbjct: 265 PGMPVDSKFYKMIKEG--FRMLSPEHA-PAEMYDIMK------TCWDADPLKRPTFKQIV 315
Query: 323 TILNNLVGD 331
++ + +
Sbjct: 316 QLIEKQISE 324
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
IG G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 94 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 145 YIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAPEI 198
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 50/288 (17%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA----QHPNI 121
+++G G GTV+ + + G+ + + + +++ +G + LA H +I
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIP-VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 95
Query: 122 VPILGFSQAPGERI-IVSEFINMASLDFYLHENNDGAS---LLDWNRRLRIATGAARGLE 177
V +LG PG + +V++++ + SL ++ ++ LL+W ++ A+G+
Sbjct: 96 VRLLGL--CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMY 147
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDY-WHEK 235
YL + ++H + A N+LL +V D+G++ L P++K+ L W
Sbjct: 148 YLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 236 GG---GNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD-----P 286
G T +SDV+ +GV + E+++ G GL R +E+ D
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL------------RLAEVPDLLEKGE 252
Query: 287 RLAIP--CEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
RLA P C I + V + C RP+ ++A + DP
Sbjct: 253 RLAQPQICTID----VYMVMVKCWMIDENIRPTFKELANEFTRMARDP 296
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 50/288 (17%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA----QHPNI 121
+++G G GTV+ + + G+ + + + +++ +G + LA H +I
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIP-VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 122 VPILGFSQAPGERI-IVSEFINMASLDFYLHENNDGAS---LLDWNRRLRIATGAARGLE 177
V +LG PG + +V++++ + SL ++ ++ LL+W ++ A+G+
Sbjct: 78 VRLLGL--CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMY 129
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDY-WHEK 235
YL + ++H + A N+LL +V D+G++ L P++K+ L W
Sbjct: 130 YLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 236 GG---GNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD-----P 286
G T +SDV+ +GV + E+++ G GL R +E+ D
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL------------RLAEVPDLLEKGE 234
Query: 287 RLAIP--CEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
RLA P C I + V + C RP+ ++A + DP
Sbjct: 235 RLAQPQICTID----VYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 65/309 (21%)
Query: 63 FSHRRIIGQGRLG-----TVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASVIKTLS-L 115
S + +G G G T Y + S + VAVK + P L+ S +K LS L
Sbjct: 43 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE-ALMSELKVLSYL 101
Query: 116 AQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDG--------------ASLLD 161
H NIV +LG G ++++E+ L +L D LD
Sbjct: 102 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 161
Query: 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR 221
L + A+G+ +L + N IH + A NILL ++CD+GL+ + +
Sbjct: 162 LEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLA----RDIK 214
Query: 222 GLAGYVDDDYWHEKGGGNA-----------------TRESDVYGFGVVLLEILS-GRRCE 263
+ YV GNA T ESDV+ +G+ L E+ S G
Sbjct: 215 NDSNYVVK--------GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 266
Query: 264 EGLLVKWAL-PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVA 322
G+ V +IKE +L P A P E+ +++ C RP+ Q+
Sbjct: 267 PGMPVDSKFYKMIKEG--FRMLSPEHA-PAEMYDIMK------TCWDADPLKRPTFKQIV 317
Query: 323 TILNNLVGD 331
++ + +
Sbjct: 318 QLIEKQISE 326
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E +AG+V ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 31/212 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 85 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLK 135
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 136 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 189
Query: 236 --GGGNATRESDVYGFGVVLLEILSGRRCEEG 265
+ + D++ G ++ E+L+GR G
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 34/267 (12%)
Query: 44 IKLCAFAYPLTEIDAATD--GFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN 101
IK A + + E D F +++GQG G V+ +G ++++ VL
Sbjct: 5 IKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGS--DARQLYAMKVLKK 62
Query: 102 AGFGFASVIKT------LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND 155
A ++T L HP IV + Q G+ ++ +F+ L L +
Sbjct: 63 ATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-- 120
Query: 156 GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215
+ + + +A A L++LH + II+ +K NILL+E+ ++ D+GLS
Sbjct: 121 -VMFTEEDVKFYLAE-LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175
Query: 216 APEEKR------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVK 269
+ + ++ G Y+ + + +G T+ +D + FGV++ E+L+G +G K
Sbjct: 176 SIDHEKKAYSFCGTVEYMAPEVVNRRG---HTQSADWWSFGVLMFEMLTGTLPFQGKDRK 232
Query: 270 WALPLIKEMRFSELLDPRLAIPCEIKP 296
+ +I L +L +P + P
Sbjct: 233 ETMTMI--------LKAKLGMPQFLSP 251
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 60
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++M F G L L +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL---FQLLQ 117
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 118 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA 153
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 98
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 99 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 149
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 150 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 203
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 58
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++M F G L L +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL---FQLLQ 115
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 116 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 61 DGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRL--VLSNAGFGFASVIKTLSLAQ 117
D F +G G G V+ + +G ++A K IH + + N ++ L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQVLHECN 65
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
P IV G + GE I E ++ SLD L + A + +++ +GL
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLT 121
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR----GLAGYVDDDYWH 233
YL + I+H +K SNIL+N + ++CD+G+S +E G Y+ +
Sbjct: 122 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQ 179
Query: 234 EKGGGNATRESDVYGFGVVLLEILSGR 260
G + + +SD++ G+ L+E+ GR
Sbjct: 180 ---GTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E +AG+V ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 68 IIGQGRLGTVYAAL-LSTGKLVAVKRI---HPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G+G+ TVY A +T ++VA+K+I H IK L HPNI+
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII- 75
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
G A G + +S + D + ++ L + + + +GLEYLHQ
Sbjct: 76 --GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM-TLQGLEYLHQHW 132
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGL--SFLAP 217
I+H +K +N+LL+E ++ D+GL SF +P
Sbjct: 133 ---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 32/225 (14%)
Query: 67 RIIGQGRLGTVYAALLST----GKLVAVKRIHPRLVLSNAGFGFASVIKT------LSLA 116
+++GQG G V+ T G L A+K VL A ++T L+
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMK------VLKKATLKVRDRVRTKMERDILADV 87
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HP +V + Q G+ ++ +F+ L L + + + + +A A GL
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAE-LALGL 143
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR------GLAGYVDDD 230
++LH + II+ +K NILL+E+ ++ D+GLS A + ++ G Y+ +
Sbjct: 144 DHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE 200
Query: 231 YWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI 275
+ +G ++ +D + +GV++ E+L+G +G K + LI
Sbjct: 201 VVNRQGHSHS---ADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 85 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 136 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 189
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 107
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 108 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 158
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 159 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 212
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 69 IGQGRLGTVYAAL---LSTGKLVAVKRIHPRLVLSNAG-FGFASVIKTLSL----AQHPN 120
+G+G G V A L K V ++ +++ S+A + +I + + +H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLH------------ENNDGASLLDWNRRLRI 168
I+ +LG G ++ E+ + +L YL +++ L +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD 228
A ARG+EYL + IH + A N+L+ E ++ D+GL+ R +
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-------RDIHHI-- 192
Query: 229 DDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL 272
DY+ + G T +SDV+ FGV+L EI + G G+ V+
Sbjct: 193 -DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 251
Query: 273 PLIKE 277
L+KE
Sbjct: 252 KLLKE 256
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 108
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 109 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 160 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 213
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 95 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 146 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 199
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI---HPRLVLSNAGFGFASVIKTLSLAQHPNIVPI 124
IG+G G V+ TG++VA+K+ V+ ++K L +HPN+V +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL---KHPNLVNL 67
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVA 184
L + +V E+ + L HE + + + I + + + H+
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVKSITWQTLQAVNFCHKH-- 121
Query: 185 PNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDY---WHEK-----G 236
N IH +K NIL+ + ++CD+G + L G + Y DD+ W+ G
Sbjct: 122 -NCIHRDVKPENILITKHSVIKLCDFGFARLL----TGPSDYYDDEVATRWYRSPELLVG 176
Query: 237 GGNATRESDVYGFGVVLLEILSG 259
DV+ G V E+LSG
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 121/299 (40%), Gaps = 62/299 (20%)
Query: 66 RRIIGQGRLGTVYAAL---LSTGK---LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
+R +G+G G V+ A LS K LVAVK + + + F + + L+ QH
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREA--ELLTNLQHE 77
Query: 120 NIVPILGFSQAPGERIIVSEFINMASLDFYLHENN-DGASLLDWNRR-----------LR 167
+IV G I+V E++ L+ +L + D L+D R L
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 168 IATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYV 227
IA+ A G+ YL + + +H + N L+ ++ D+G+S
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMS----------RDVY 184
Query: 228 DDDYWHEKGGGNA-----------------TRESDVYGFGVVLLEILS-GRRCEEGLLVK 269
DY+ + GG+ T ESDV+ FGV+L EI + G++ L
Sbjct: 185 STDYY--RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 242
Query: 270 WALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328
+ I + R E PR+ P E+ V L C + R +I ++ IL+ L
Sbjct: 243 EVIECITQGRVLE--RPRVC-PKEV------YDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRI----HPRLVLSNAGFGFASVIKTL 113
+ + + + ++G+G G V TG++VA+K+ ++V A IK L
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA----MREIKLL 78
Query: 114 SLAQHPNIVPILGFSQAPGERIIVSEFINMASLD-FYLHENNDGASLLDWNRRLRIATGA 172
+H N+V +L + +V EF++ LD L N LD+ +
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQI 133
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLA--GYVDDD 230
G+ + H + NIIH IK NIL+++ ++CD+G + R LA G V DD
Sbjct: 134 INGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFA-------RTLAAPGEVYDD 183
Query: 231 ----YWHEK-----GGGNATRESDVYGFGVVLLEILSG 259
W+ G + DV+ G ++ E+ G
Sbjct: 184 EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 33/204 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
+G G+ G V VA+K I + + A V+ LS H +V + G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS---HEKLVQLYGVC 73
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
I++E++ L YL E + L + +EYL + +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNATR------ 242
H + A N L+N++ +V D+GLS +DD+Y +G R
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYV----------LDDEYTSSRGSKFPVRWSPPEV 177
Query: 243 --------ESDVYGFGVVLLEILS 258
+SD++ FGV++ EI S
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQ 117
+D + I+G G + V+ A L + VAVK + L + + F + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 118 HPNIVPI--LGFSQAPGERI--IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
HP IV + G ++ P + IV E+++ +L +H + R + + A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADAC 126
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR---------GLA 224
+ L + HQ IIH +K +NI+++ +V D+G++ + G A
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 225 GYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
Y+ + + G + SDVY G VL E+L+G
Sbjct: 184 QYLSPE---QARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 85 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E +AG+V ++
Sbjct: 136 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRAPEI 189
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 69 IGQGRLGTVYAAL---LSTGKLVAVKRIHPRLVLSNAG-FGFASVIKTLSL----AQHPN 120
+G+G G V A L K V ++ +++ S+A + +I + + +H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLH------------ENNDGASLLDWNRRLRI 168
I+ +LG G ++ E+ + +L YL +++ L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD 228
A ARG+EYL + IH + A N+L+ E ++ D+GL+ R +
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-------RDIHHI-- 188
Query: 229 DDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL 272
DY+ + G T +SDV+ FGV+L EI + G G+ V+
Sbjct: 189 -DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
Query: 273 PLIKE 277
L+KE
Sbjct: 248 KLLKE 252
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 99
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 100 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 150
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 151 YIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAPEI 204
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 94 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 145 YIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRAPEI 198
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 119/309 (38%), Gaps = 65/309 (21%)
Query: 63 FSHRRIIGQGRLG-----TVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASVIKTLS-L 115
S + +G G G T Y + S + VAVK + P L+ S +K LS L
Sbjct: 48 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE-ALMSELKVLSYL 106
Query: 116 AQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDG--------------ASLLD 161
H NIV +LG G ++++E+ L +L D LD
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR 221
L + A+G+ +L + N IH + A NILL ++CD+GL+ +
Sbjct: 167 LEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLA----RHIK 219
Query: 222 GLAGYVDDDYWHEKGGGNA-----------------TRESDVYGFGVVLLEILS-GRRCE 263
+ YV GNA T ESDV+ +G+ L E+ S G
Sbjct: 220 NDSNYVVK--------GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 271
Query: 264 EGLLVKWAL-PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVA 322
G+ V +IKE +L P A P E+ +++ C RP+ Q+
Sbjct: 272 PGMPVDSKFYKMIKEG--FRMLSPEHA-PAEMYDIMK------TCWDADPLKRPTFKQIV 322
Query: 323 TILNNLVGD 331
++ + +
Sbjct: 323 QLIEKQISE 331
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 102/267 (38%), Gaps = 39/267 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
+G+G G V + +G++ AVKRI + + + P V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
G+ I E + SLD + + D + + +IA + LE+LH ++ +
Sbjct: 102 LFREGDVWICXELXD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 158
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG--------- 238
IH +K SN+L+N + CD+G+S GY+ DD + G
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGIS-----------GYLVDDVAKDIDAGCKPYXAPER 207
Query: 239 --------NATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290
+ +SD++ G+ +E+ R + W P + + E P+L
Sbjct: 208 INPELNQKGYSVKSDIWSLGITXIELAILRFPYDS----WGTPFQQLKQVVEEPSPQL-- 261
Query: 291 PCEIKPLVRLAKVALACVGNSRKNRPS 317
P + K C+ + K RP+
Sbjct: 262 PAD-KFSAEFVDFTSQCLKKNSKERPT 287
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 69 IGQGRLGTVYAAL---LSTGKLVAVKRIHPRLVLSNAG-FGFASVIKTLSL----AQHPN 120
+G+G G V A L K V ++ +++ S+A + +I + + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLH------------ENNDGASLLDWNRRLRI 168
I+ +LG G ++ E+ + +L YL +++ L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD 228
A ARG+EYL + IH + A N+L+ E ++ D+GL+ R +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-------RDIHHI-- 203
Query: 229 DDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL 272
DY+ + G T +SDV+ FGV+L EI + G G+ V+
Sbjct: 204 -DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 273 PLIKE 277
L+KE
Sbjct: 263 KLLKE 267
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 69 IGQGRLGTVYAAL---LSTGKLVAVKRIHPRLVLSNAG-FGFASVIKTLSL----AQHPN 120
+G+G G V A L K V ++ +++ S+A + +I + + +H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLH------------ENNDGASLLDWNRRLRI 168
I+ +LG G ++ E+ + +L YL +++ L +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD 228
A ARG+EYL + IH + A N+L+ E ++ D+GL+ R +
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-------RDIHHI-- 195
Query: 229 DDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL 272
DY+ + G T +SDV+ FGV+L EI + G G+ V+
Sbjct: 196 -DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 254
Query: 273 PLIKE 277
L+KE
Sbjct: 255 KLLKE 259
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 69 IGQGRLGTVYAAL---LSTGKLVAVKRIHPRLVLSNAG-FGFASVIKTLSL----AQHPN 120
+G+G G V A L K V ++ +++ S+A + +I + + +H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLH------------ENNDGASLLDWNRRLRI 168
I+ +LG G ++ E+ + +L YL +++ L +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD 228
A ARG+EYL + IH + A N+L+ E ++ D+GL+ R +
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-------RDIHHI-- 196
Query: 229 DDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL 272
DY+ + G T +SDV+ FGV+L EI + G G+ V+
Sbjct: 197 -DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 255
Query: 273 PLIKE 277
L+KE
Sbjct: 256 KLLKE 260
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 17/197 (8%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
+G G G VY A TG L A K I + + I+ L+ HP IV +LG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
G+ I+ EF ++D + E + G + +I + LE L+ + I
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLT------EPQIQVVCRQMLEALNFLHSKRI 130
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--------HEKGGGN 239
IH +KA N+L+ + R+ D+G+S + + ++ YW
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 240 ATRESDVYGFGVVLLEI 256
++D++ G+ L+E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 69 IGQGRLGTVYAAL---LSTGKLVAVKRIHPRLVLSNAG-FGFASVIKTLSL----AQHPN 120
+G+G G V A L K V ++ +++ S+A + +I + + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLH------------ENNDGASLLDWNRRLRI 168
I+ +LG G ++ E+ + +L YL +++ L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD 228
A ARG+EYL + IH + A N+L+ E ++ D+GL+ R +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-------RDIHHI-- 203
Query: 229 DDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL 272
DY+ + G T +SDV+ FGV+L EI + G G+ V+
Sbjct: 204 -DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 273 PLIKE 277
L+KE
Sbjct: 263 KLLKE 267
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQ 117
+D + I+G G + V+ A L + VAVK + L + + F + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 118 HPNIVPI--LGFSQAPGERI--IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
HP IV + G ++ P + IV E+++ +L +H + R + + A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADAC 126
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR---------GLA 224
+ L + HQ IIH +K +NI+++ +V D+G++ + G A
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 225 GYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
Y+ + + G + SDVY G VL E+L+G
Sbjct: 184 QYLSPE---QARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 49/227 (21%)
Query: 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQ 117
+D + I+G G + V+ A L + VAVK + L + + F + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 118 HPNIVPI--LGFSQAPGERI--IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
HP IV + G ++ P + IV E+++ +L +H + R + + A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADAC 126
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-------------------- 213
+ L + HQ IIH +K +NI+++ +V D+G++
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 214 -FLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
+L+PE+ RG + SDVY G VL E+L+G
Sbjct: 184 QYLSPEQARG---------------DSVDARSDVYSLGCVLYEVLTG 215
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 96 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 147 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAPEI 200
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 22/139 (15%)
Query: 110 IKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIA 169
++ L P IV G + GE I E ++ SLD L E A + +++
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE----AKRIPEEILGKVS 120
Query: 170 TGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL----------------S 213
RGL YL + I+H +K SNIL+N + ++CD+G+ S
Sbjct: 121 IAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 178
Query: 214 FLAPEEKRGLAGYVDDDYW 232
++APE +G V D W
Sbjct: 179 YMAPERLQGTHYSVQSDIW 197
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQ 117
+D + I+G G + V+ A L + VAVK + L + + F + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 118 HPNIVPI--LGFSQAPGERI--IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
HP IV + G ++ P + IV E+++ +L +H + R + + A
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADAC 126
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR---------GLA 224
+ L + HQ IIH +K +NI+++ +V D+G++ + G A
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 225 GYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
Y+ + + G + SDVY G VL E+L+G
Sbjct: 184 QYLSPE---QARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 94 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 145 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 198
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 69 IGQGRLGTVYAAL---LSTGKLVAVKRIHPRLVLSNAG-FGFASVIKTLSL----AQHPN 120
+G+G G V A L K V ++ +++ S+A + +I + + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLH------------ENNDGASLLDWNRRLRI 168
I+ +LG G ++ E+ + +L YL +++ L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD 228
A ARG+EYL + IH + A N+L+ E ++ D+GL+ R +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-------RDIHHI-- 203
Query: 229 DDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL 272
DY+ + G T +SDV+ FGV+L EI + G G+ V+
Sbjct: 204 -DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 273 PLIKE 277
L+KE
Sbjct: 263 KLLKE 267
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 96 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 147 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAPEI 200
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 111/312 (35%), Gaps = 69/312 (22%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL------LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLS 114
+ + R IG+G G V+ A +VAVK + ++ F ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMA 105
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE--------------------NN 154
+PNIV +LG ++ E++ L+ +L ++
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 155 DGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214
G L +L IA A G+ YL + +H + N L+ E ++ D+GLS
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLS- 221
Query: 215 LAPEEKRGLAGYVDDDYWHEKGG---------------GNATRESDVYGFGVVLLEILSG 259
DY+ G T ESDV+ +GVVL EI S
Sbjct: 222 ---------RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS- 271
Query: 260 RRCEEGLLVKWALP---LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRP 316
GL + + +I +R +L P E+ L+RL C +RP
Sbjct: 272 ----YGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRL------CWSKLPADRP 321
Query: 317 SIVQVATILNNL 328
S + IL +
Sbjct: 322 SFCSIHRILQRM 333
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 96 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 147 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 200
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 94 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 145 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 198
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 87
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 88 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 138
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 139 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 192
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 96 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 147 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAPEI 200
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 85
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 86 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 136
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 137 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 190
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 17/197 (8%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
+G G G VY A TG L A K I + + I+ L+ HP IV +LG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
G+ I+ EF ++D + E + G + +I + LE L+ + I
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLT------EPQIQVVCRQMLEALNFLHSKRI 138
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--------HEKGGGN 239
IH +KA N+L+ + R+ D+G+S + + ++ YW
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 240 ATRESDVYGFGVVLLEI 256
++D++ G+ L+E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 91 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 142 YIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---MTGYVATRWYRAPEI 195
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 85
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 86 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 136
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 137 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 190
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 91 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 142 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 195
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 85 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 136 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 189
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 95 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 146 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 199
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 91 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 142 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 195
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 95 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 146 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 199
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 91 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 142 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 195
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 101 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 152 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 205
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 101 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 152 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 205
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQ 117
+D + I+G G + V+ A L + VAVK + L + + F + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 118 HPNIVPI--LGFSQAPGERI--IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
HP IV + G ++ P + IV E+++ +L +H + R + + A
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADAC 143
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR---------GLA 224
+ L + HQ IIH +K +NI+++ +V D+G++ + G A
Sbjct: 144 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 225 GYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
Y+ + + G + SDVY G VL E+L+G
Sbjct: 201 QYLSPE---QARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 99
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 100 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 150
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 151 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 204
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 95 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 146 YIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---MTGYVATRWYRAPEI 199
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 111
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 112 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 162
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 163 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 216
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 107
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 108 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 158
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 159 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 212
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 29/235 (12%)
Query: 69 IGQGRLGTVYAAL---LSTGKLVAVKRIHPRLVLSNAG-FGFASVIKTLSL----AQHPN 120
+G+G G V A L K V ++ +++ S+A + +I + + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 121 IVPILGFSQAPGERIIVSEFINMAS------------LDFYLHENNDGASLLDWNRRLRI 168
I+ +LG G ++ E+ + + L+F + +++ L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS---FLAPEEKRGLAG 225
A ARG+EYL + IH + A N+L+ E ++ D+GL+ K+ G
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 226 YVDDDYWHEKGGGNA--TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKE 277
+ + + + T +SDV+ FGV+L EI + G G+ V+ L+KE
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 37/213 (17%)
Query: 67 RIIGQGRLGTVY-------------AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTL 113
R+IG+G G VY A+ S ++ ++++ A +++ L
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV-------EAFLREGLLMRGL 79
Query: 114 SLAQHPNIVPILGFSQAP-GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGA 172
+ HPN++ ++G P G ++ ++ L ++ ++ D +
Sbjct: 80 N---HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQV 133
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-------FLAPEEKRGLAG 225
ARG+EYL + +H + A N +L+E F +V D+GL+ + + ++ R
Sbjct: 134 ARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 226 YVDDDYWHEKGGGNATRESDVYGFGVVLLEILS 258
V T +SDV+ FGV+L E+L+
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 69 IGQGRLGTVYAAL---LSTGKLVAVKRIHPRLVLSNAG-FGFASVIKTLSL----AQHPN 120
+G+G G V A L K V ++ +++ S+A + +I + + +H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLH------------ENNDGASLLDWNRRLRI 168
I+ +LG G ++ E+ + +L YL +++ L +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVD 228
A ARG+EYL + IH + A N+L+ E ++ D+GL+ R +
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-------RDIHHI-- 244
Query: 229 DDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL 272
DY+ + G T +SDV+ FGV+L EI + G G+ V+
Sbjct: 245 -DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303
Query: 273 PLIKE 277
L+KE
Sbjct: 304 KLLKE 308
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 101 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 152 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 205
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 86
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 87 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 137
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 138 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 191
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 108
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 109 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 160 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 213
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 19/216 (8%)
Query: 54 TEIDAATDGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGF--GFASVI 110
T I + F ++G+G VY A + TG VA+K I + + AG + +
Sbjct: 4 TCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKK-AMYKAGMVQRVQNEV 62
Query: 111 KTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIAT 170
K +HP+I+ + + + +V E + ++ YL + N
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMH 119
Query: 171 GAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--FLAPEEKR----GLA 224
G+ YLH + I+H + SN+LL ++ D+GL+ P EK G
Sbjct: 120 QIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTP 176
Query: 225 GYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
Y+ + G ESDV+ G + +L GR
Sbjct: 177 NYISPEIATRSAHG---LESDVWSLGCMFYTLLIGR 209
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 111
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 112 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 162
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 163 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MXGYVATRWYRAPEI 216
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 67 RIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ IG+G V A + TGK VAVK I + S++ ++ + + HPNIV +
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRLRIATGAAR------GL 176
E I + + E G + D+ + R++ A+ +
Sbjct: 80 -------------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--FLAPEEKRGLAG---YVDDDY 231
+Y HQ I+H +KA N+LL+ ++ D+G S F + G Y +
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPEL 183
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
+ +G E DV+ GV+L ++SG
Sbjct: 184 F--QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 20/237 (8%)
Query: 32 KKKPVESEETLPIKLCAFAYPLTEI-DAATDGFSHRRIIGQGRLGTVY-AALLSTGKLVA 89
K + +E +E +L AF ++ + D F +G G G V+ + +G ++A
Sbjct: 3 KLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA 62
Query: 90 VKRIHPRL--VLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLD 147
K IH + + N ++ L P IV G + GE I E ++ SLD
Sbjct: 63 RKLIHLEIKPAIRNQ---IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 119
Query: 148 FYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARV 207
L + A + +++ +GL YL + I+H +K SNIL+N + ++
Sbjct: 120 QVLKK----AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKL 173
Query: 208 CDYGLSFLAPEEKR----GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
CD+G+S + G Y+ + G + + +SD++ G+ L+E+ GR
Sbjct: 174 CDFGVSGQLIDSMANSFVGTRSYMSPERLQ---GTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 56 IDAATDGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRL--VLSNAGFGFASVIKT 112
++ D F +G G G V+ + +G ++A K IH + + N ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQV 57
Query: 113 LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGA 172
L P IV G + GE I E ++ SLD L + A + +++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAV 113
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR----GLAGYVD 228
+GL YL + I+H +K SNIL+N + ++CD+G+S + G Y+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 171
Query: 229 DDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
+ G + + +SD++ G+ L+E+ GR
Sbjct: 172 PERLQ---GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 68 IIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA---QHPNIVP 123
+IG+G V + TG+ AVK + S+ G + + S+ +HP+IV
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+L + G +V EF++ A L F + + D + L Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 149
Query: 184 APNIIHGCIKASNILLNEKFCA---RVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA 240
NIIH +K N+LL K + ++ D+G++ E G V H
Sbjct: 150 --NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP--HFMAPEVV 205
Query: 241 TRES-----DVYGFGVVLLEILSG 259
RE DV+G GV+L +LSG
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSG 229
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 56 IDAATDGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRL--VLSNAGFGFASVIKT 112
++ D F +G G G V+ + +G ++A K IH + + N ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQV 57
Query: 113 LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGA 172
L P IV G + GE I E ++ SLD L + A + +++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAV 113
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR----GLAGYVD 228
+GL YL + I+H +K SNIL+N + ++CD+G+S + G Y+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 171
Query: 229 DDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
+ G + + +SD++ G+ L+E+ GR
Sbjct: 172 PERLQ---GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 56 IDAATDGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRL--VLSNAGFGFASVIKT 112
++ D F +G G G V+ + +G ++A K IH + + N ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQV 57
Query: 113 LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGA 172
L P IV G + GE I E ++ SLD L + A + +++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAV 113
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR----GLAGYVD 228
+GL YL + I+H +K SNIL+N + ++CD+G+S + G Y+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 171
Query: 229 DDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
+ G + + +SD++ G+ L+E+ GR
Sbjct: 172 PERLQ---GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 74
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 133
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG Y+ Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSYICSRY 187
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 56 IDAATDGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRL--VLSNAGFGFASVIKT 112
++ D F +G G G V+ + +G ++A K IH + + N ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQV 57
Query: 113 LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGA 172
L P IV G + GE I E ++ SLD L + A + +++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAV 113
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR----GLAGYVD 228
+GL YL + I+H +K SNIL+N + ++CD+G+S + G Y+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 171
Query: 229 DDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
+ G + + +SD++ G+ L+E+ GR
Sbjct: 172 PERLQ---GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
RGL+Y+H + IIH +K SN+ +NE R+ D+GL+ A EE + GYV ++
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE---MTGYVATRWYR 195
Query: 234 EK----GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL F ++ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQGKAFK-NRELQIMRKLDHCN 74
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 133
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG Y+ Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSYICSRY 187
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 21/159 (13%)
Query: 66 RRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTL----SLAQHPN 120
RR++ +G VY A + +G+ A+KR+ LSN ++I+ + L+ HPN
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRL-----LSNEEEKNRAIIQEVCFMKKLSGHPN 87
Query: 121 IVPILGFSQ--------APGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGA 172
IV + E ++++E ++F + G L + L+I
Sbjct: 88 IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP--LSCDTVLKIFYQT 145
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211
R ++++H+ P IIH +K N+LL+ + ++CD+G
Sbjct: 146 CRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 45/241 (18%)
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL 166
A+V++ L +P IV ++G +A ++V E + L+ YL +N + D N +
Sbjct: 421 ANVMQQLD---NPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNR---HVKDKNI-I 472
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGY 226
+ + G++YL + N +H + A N+LL + A++ D+GLS A
Sbjct: 473 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS---------KALR 520
Query: 227 VDDDYWHEKGGGNA---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
D++Y+ + G + +SDV+ FGV++ E S G++ G+
Sbjct: 521 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 580
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330
++++ E + P E+ L+ L C +NRP V L N
Sbjct: 581 VTAMLEK---GERMGCPAGCPREMYDLMNL------CWTYDVENRPGFAAVELRLRNYYY 631
Query: 331 D 331
D
Sbjct: 632 D 632
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ IG+G V A + TGK VAVK I + S++ ++ + + HPNIV +
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRLRIATGAAR------GL 176
E I + + E G + D+ + R++ A+ +
Sbjct: 80 -------------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--FLAPEEKRGLAG---YVDDDY 231
+Y HQ I+H +KA N+LL+ ++ D+G S F + G Y +
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL 183
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
+ +G E DV+ GV+L ++SG
Sbjct: 184 F--QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 78/204 (38%), Gaps = 33/204 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
+G G+ G V VA+K I + + A V+ LS H +V + G
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS---HEKLVQLYGVC 68
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
I++E++ L YL E + L + +EYL + +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFL 122
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNATR------ 242
H + A N L+N++ +V D+GLS +DD+Y G R
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYV----------LDDEYTSSVGSKFPVRWSPPEV 172
Query: 243 --------ESDVYGFGVVLLEILS 258
+SD++ FGV++ EI S
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 78/204 (38%), Gaps = 33/204 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
+G G+ G V VA+K I + + A V+ LS H +V + G
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS---HEKLVQLYGVC 72
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
I++E++ L YL E + L + +EYL + +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFL 126
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNATR------ 242
H + A N L+N++ +V D+GLS +DD+Y G R
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYV----------LDDEYTSSVGSKFPVRWSPPEV 176
Query: 243 --------ESDVYGFGVVLLEILS 258
+SD++ FGV++ EI S
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 59
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 116
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 117 SFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 45/241 (18%)
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL 166
A+V++ L +P IV ++G +A ++V E + L+ YL +N + D N +
Sbjct: 422 ANVMQQLD---NPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNR---HVKDKNI-I 473
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGY 226
+ + G++YL + N +H + A N+LL + A++ D+GLS A
Sbjct: 474 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS---------KALR 521
Query: 227 VDDDYWHEKGGGNA---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
D++Y+ + G + +SDV+ FGV++ E S G++ G+
Sbjct: 522 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 581
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330
++++ E + P E+ L+ L C +NRP V L N
Sbjct: 582 VTAMLEK---GERMGCPAGCPREMYDLMNL------CWTYDVENRPGFAAVELRLRNYYY 632
Query: 331 D 331
D
Sbjct: 633 D 633
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ IG+G V A + TGK VAVK I + S++ ++ + + HPNIV +
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRLRIATGAAR------GL 176
E I + + E G + D+ + R++ A+ +
Sbjct: 80 -------------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--FLAPEEKRGLAG---YVDDDY 231
+Y HQ I+H +KA N+LL+ ++ D+G S F + G Y +
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL 183
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
+ +G E DV+ GV+L ++SG
Sbjct: 184 F--QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
RGL+Y+H IIH +K SN+ +NE R+ D+GL+ A EE + GYV ++
Sbjct: 134 RGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEE---MTGYVATRWYR 187
Query: 234 EK----GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L G+
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
RGL+Y+H + IIH +K SN+ +NE R+ D+GL+ A EE + GYV ++
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE---MTGYVATRWYR 195
Query: 234 EK----GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 56 IDAATDGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRL--VLSNAGFGFASVIKT 112
++ D F +G G G V+ + +G ++A K IH + + N ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQV 57
Query: 113 LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGA 172
L P IV G + GE I E ++ SLD L + A + +++
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAV 113
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR----GLAGYVD 228
+GL YL + I+H +K SNIL+N + ++CD+G+S + G Y+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMS 171
Query: 229 DDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
+ G + + +SD++ G+ L+E+ GR
Sbjct: 172 PERLQ---GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 57
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 114
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 57
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 114
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 78/204 (38%), Gaps = 33/204 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
+G G+ G V VA+K I + + A V+ LS H +V + G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS---HEKLVQLYGVC 73
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
I++E++ L YL E + L + +EYL + +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNATR------ 242
H + A N L+N++ +V D+GLS +DD+Y G R
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYV----------LDDEYTSSVGSKFPVRWSPPEV 177
Query: 243 --------ESDVYGFGVVLLEILS 258
+SD++ FGV++ EI S
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL F ++ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQGKAFKNRE-LQIMRKLDHCN 74
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 133
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG Y+ Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSYICSRY 187
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 57
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 114
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASV----IKTLSLAQHPNIVP 123
IGQG G V+ A TG+ VA+K++ ++ N GF IK L L +H N+V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV----LMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 124 ILGFSQ---APGERIIVSEFINMASLDFYLHENNDGASLLD-------WNRRLRIATGAA 173
++ + +P R S ++ DF H D A LL + R+
Sbjct: 82 LIEICRTKASPYNRCKASIYL---VFDFCEH---DLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL Y+H+ I+H +KA+N+L+ ++ D+GL+
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 87
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 146
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG Y+ Y
Sbjct: 147 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSYICSRY 200
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 61 DGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRL--VLSNAGFGFASVIKTLSLAQ 117
D F +G G G V+ + +G ++A K IH + + N +I+ L +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------QIIRELQVLH 121
Query: 118 HPNIVPILGFSQA---PGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
N I+GF A GE I E ++ SLD L + A + +++ +
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIK 177
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR----GLAGYVDDD 230
GL YL + I+H +K SNIL+N + ++CD+G+S + G Y+ +
Sbjct: 178 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 235
Query: 231 YWHEKGGGNATRESDVYGFGVVLLEILSGR 260
G + + +SD++ G+ L+E+ GR
Sbjct: 236 RLQ---GTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 60
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 117
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 59
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 116
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 59
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 116
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 117 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA 152
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+ +LA + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDF---YLARHTDDEMTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 45/241 (18%)
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL 166
A+V++ L +P IV ++G +A ++V E + L+ YL +N + D N +
Sbjct: 77 ANVMQQLD---NPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNR---HVKDKNI-I 128
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGY 226
+ + G++YL + N +H + A N+LL + A++ D+GLS A
Sbjct: 129 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS---------KALR 176
Query: 227 VDDDYWHEKGGGNA---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
D++Y+ + G + +SDV+ FGV++ E S G++ G+
Sbjct: 177 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 236
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330
++++ E + P E+ L+ L C +NRP V L N
Sbjct: 237 VTAMLEK---GERMGCPAGCPREMYDLMNL------CWTYDVENRPGFAAVELRLRNYYY 287
Query: 331 D 331
D
Sbjct: 288 D 288
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 59
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 116
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 63
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 120
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 60
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 117
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 57
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 114
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H + ++H +K N+L+N + ++ D+GL+
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 69 IGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G V A + S+GKLVAVK++ R F V+ + QH N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVV-IMRDYQHENVVEMYNS 85
Query: 128 SQAPGERIIVSEFINMASL-DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186
E +V EF+ +L D H + + + + L LH A
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLH---AQG 136
Query: 187 IIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNAT---RE 243
+IH IK+ +ILL ++ D+G +E V YW + E
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 244 SDVYGFGVVLLEILSG 259
D++ G++++E++ G
Sbjct: 197 VDIWSLGIMVIEMVDG 212
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL 166
A+V++ L +P IV ++G +A ++V E + L+ YL +N +
Sbjct: 63 ANVMQQLD---NPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNII 114
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGY 226
+ + G++YL + N +H + A N+LL + A++ D+GLS A
Sbjct: 115 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS---------KALR 162
Query: 227 VDDDYWHEKGGGNA---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
D++Y+ + G + +SDV+ FGV++ E S G++ G+
Sbjct: 163 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330
++++ E + P E+ L+ L C +NRP V L N
Sbjct: 223 VTAMLEK---GERMGCPAGCPREMYDLMNL------CWTYDVENRPGFAAVELRLRNYYY 273
Query: 331 D 331
D
Sbjct: 274 D 274
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 69 IGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G V A + S+GKLVAVK++ R F V+ + QH N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVV-IMRDYQHENVVEMYNS 94
Query: 128 SQAPGERIIVSEFINMASL-DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186
E +V EF+ +L D H + + + + L LH A
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLH---AQG 145
Query: 187 IIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNAT---RE 243
+IH IK+ +ILL ++ D+G +E V YW + E
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 244 SDVYGFGVVLLEILSG 259
D++ G++++E++ G
Sbjct: 206 VDIWSLGIMVIEMVDG 221
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 58
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 115
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 59
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 116
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 58
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 115
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 58
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 115
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 116 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 78/204 (38%), Gaps = 33/204 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
+G G+ G V VA+K I + + A V+ LS H +V + G
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS---HEKLVQLYGVC 79
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
I++E++ L YL E + L + +EYL + +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFL 133
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNATR------ 242
H + A N L+N++ +V D+GLS +DD+Y G R
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYV----------LDDEYTSSVGSKFPVRWSPPEV 183
Query: 243 --------ESDVYGFGVVLLEILS 258
+SD++ FGV++ EI S
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 43/219 (19%)
Query: 63 FSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTL--SLAQHP 119
F R+IG+G V L T ++ A+K + LV + + K + + HP
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 120 NIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
+V + Q V E++N L F++ L + + R A + L YL
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAE-ISLALNYL 137
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGL------------------SFLAPEEKR 221
H+ II+ +K N+LL+ + ++ DYG+ +++APE R
Sbjct: 138 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 194
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
G D+W GV++ E+++GR
Sbjct: 195 GEDYGFSVDWW---------------ALGVLMFEMMAGR 218
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 58
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 115
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL 166
A+V++ L +P IV ++G +A ++V E + L+ YL +N +
Sbjct: 69 ANVMQQLD---NPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNII 120
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGY 226
+ + G++YL + N +H + A N+LL + A++ D+GLS A
Sbjct: 121 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS---------KALR 168
Query: 227 VDDDYWHEKGGGNA---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
D++Y+ + G + +SDV+ FGV++ E S G++ G+
Sbjct: 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 228
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330
++++ E + P E+ L+ L C +NRP V L N
Sbjct: 229 VTAMLEK---GERMGCPAGCPREMYDLMNL------CWTYDVENRPGFAAVELRLRNYYY 279
Query: 331 D 331
D
Sbjct: 280 D 280
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL 166
A+V++ L +P IV ++G +A ++V E + L+ YL +N +
Sbjct: 79 ANVMQQLD---NPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNII 130
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGY 226
+ + G++YL + N +H + A N+LL + A++ D+GLS A
Sbjct: 131 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS---------KALR 178
Query: 227 VDDDYWHEKGGGNA---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
D++Y+ + G + +SDV+ FGV++ E S G++ G+
Sbjct: 179 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330
++++ E + P E+ L+ L C +NRP V L N
Sbjct: 239 VTAMLEK---GERMGCPAGCPREMYDLMNL------CWTYDVENRPGFAAVELRLRNYYY 289
Query: 331 D 331
D
Sbjct: 290 D 290
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL 166
A+V++ L +P IV ++G +A ++V E + L+ YL +N +
Sbjct: 79 ANVMQQLD---NPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNII 130
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGY 226
+ + G++YL + N +H + A N+LL + A++ D+GLS A
Sbjct: 131 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS---------KALR 178
Query: 227 VDDDYWHEKGGGNA---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
D++Y+ + G + +SDV+ FGV++ E S G++ G+
Sbjct: 179 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330
++++ E + P E+ L+ L C +NRP V L N
Sbjct: 239 VTAMLEK---GERMGCPAGCPREMYDLMNL------CWTYDVENRPGFAAVELRLRNYYY 289
Query: 331 D 331
D
Sbjct: 290 D 290
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 108
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 109 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E G W+
Sbjct: 160 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVA----TRWYRAPE 212
Query: 236 ---GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 58
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 115
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 41/191 (21%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ E+ + +L YL N + +
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG 222
+ ARG+EYL + IH + A N+L+ E R+ D+GL+ R
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLA-------RD 206
Query: 223 LAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ DY+ + G T +SDV+ FGV++ EI + G G+
Sbjct: 207 INNI---DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
Query: 267 LVKWALPLIKE 277
V+ L+KE
Sbjct: 264 PVEELFKLLKE 274
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 58
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 115
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 66
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 123
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 124 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 61
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQ 118
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 119 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 43/219 (19%)
Query: 63 FSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTL--SLAQHP 119
F R+IG+G V L T ++ A+K + LV + + K + + HP
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 120 NIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
+V + Q V E++N L F++ L + + R A + L YL
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAE-ISLALNYL 122
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGL------------------SFLAPEEKR 221
H+ II+ +K N+LL+ + ++ DYG+ +++APE R
Sbjct: 123 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 179
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
G D+W GV++ E+++GR
Sbjct: 180 GEDYGFSVDWW---------------ALGVLMFEMMAGR 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 60
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V EF++ F G L L +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL---FQLLQ 117
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL + H ++H +K N+L+N + ++ D+GL+
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 58
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 115
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 69 IGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G V A + S+GKLVAVK++ R F V+ + QH N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVV-IMRDYQHENVVEMYNS 96
Query: 128 SQAPGERIIVSEFINMASL-DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186
E +V EF+ +L D H + ++ + + + L LH A
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLH---AQG 147
Query: 187 IIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNAT---RE 243
+IH IK+ +ILL ++ D+G +E V YW + E
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 244 SDVYGFGVVLLEILSG 259
D++ G++++E++ G
Sbjct: 208 VDIWSLGIMVIEMVDG 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL 166
A+V++ L +P IV ++G +A ++V E + L+ YL +N +
Sbjct: 59 ANVMQQLD---NPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNII 110
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGY 226
+ + G++YL + N +H + A N+LL + A++ D+GLS A
Sbjct: 111 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS---------KALR 158
Query: 227 VDDDYWHEKGGGNA---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
D++Y+ + G + +SDV+ FGV++ E S G++ G+
Sbjct: 159 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330
++++ E + P E+ L+ L C +NRP V L N
Sbjct: 219 VTAMLEK---GERMGCPAGCPREMYDLMNL------CWTYDVENRPGFAAVELRLRNYYY 269
Query: 331 D 331
D
Sbjct: 270 D 270
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 78/204 (38%), Gaps = 33/204 (16%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
+G G+ G V VA+K I + + A V+ LS H +V + G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS---HEKLVQLYGVC 88
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
I++E++ L YL E + L + +EYL + +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 189 HGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNATR------ 242
H + A N L+N++ +V D+GLS +DD+Y G R
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYV----------LDDEYTSSVGSKFPVRWSPPEV 192
Query: 243 --------ESDVYGFGVVLLEILS 258
+SD++ FGV++ EI S
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 69 IGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ---HPNIVPI 124
+G+G TVY T LVA+K I L + + I+ +SL + H NIV +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIR----LEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVA 184
+V E+++ L YL +D ++++ + RGL Y H+
Sbjct: 66 HDIIHTEKSLTLVFEYLD-KDLKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCHR--- 118
Query: 185 PNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDD----YWHEK----- 235
++H +K N+L+NE+ ++ D+GL+ + + D+ W+
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLA-----RAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 236 GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI 275
G + + + D++G G + E+ +GR G V+ L I
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 59
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 116
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 24/244 (9%)
Query: 52 PLTEI-DAATDGFSHRR-----IIGQGRLGTVYAALLSTGKLVAVKRIHPRLVL--SNAG 103
PL EI D D + +R +G+G Y K V ++ P+ +L +
Sbjct: 27 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 86
Query: 104 FGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWN 163
++ I +P++V GF + +V E SL LH+ + +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEAR 145
Query: 164 RRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF---LAPEEK 220
+R +G++YLH +IH +K N+ LN+ ++ D+GL+ E K
Sbjct: 146 YFMR---QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 221 RGLAG---YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE 277
+ L G Y+ + +KG + E D++ G +L +L G+ E +K IK+
Sbjct: 200 KDLCGTPNYIAPEVLCKKG---HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
Query: 278 MRFS 281
+S
Sbjct: 257 NEYS 260
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 24/244 (9%)
Query: 52 PLTEI-DAATDGFSHRR-----IIGQGRLGTVYAALLSTGKLVAVKRIHPRLVL--SNAG 103
PL EI D D + +R +G+G Y K V ++ P+ +L +
Sbjct: 11 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 70
Query: 104 FGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWN 163
++ I +P++V GF + +V E SL LH+ + +
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEAR 129
Query: 164 RRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF---LAPEEK 220
+R +G++YLH +IH +K N+ LN+ ++ D+GL+ E K
Sbjct: 130 YFMR---QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 183
Query: 221 RGLAG---YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE 277
+ L G Y+ + +KG + E D++ G +L +L G+ E +K IK+
Sbjct: 184 KDLCGTPNYIAPEVLCKKG---HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 240
Query: 278 MRFS 281
+S
Sbjct: 241 NEYS 244
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 66
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 123
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 124 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 69 IGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G V A + S+GKLVAVK++ R F V+ + QH N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVV-IMRDYQHENVVEMYNS 89
Query: 128 SQAPGERIIVSEFINMASL-DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186
E +V EF+ +L D H + ++ + + + L LH A
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLH---AQG 140
Query: 187 IIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNAT---RE 243
+IH IK+ +ILL ++ D+G +E V YW + E
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 244 SDVYGFGVVLLEILSG 259
D++ G++++E++ G
Sbjct: 201 VDIWSLGIMVIEMVDG 216
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL 166
A+V++ L +P IV ++G +A ++V E + L+ YL +N +
Sbjct: 57 ANVMQQLD---NPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNII 108
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGY 226
+ + G++YL + N +H + A N+LL + A++ D+GLS A
Sbjct: 109 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS---------KALR 156
Query: 227 VDDDYWHEKGGGNA---------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKW 270
D++Y+ + G + +SDV+ FGV++ E S G++ G+
Sbjct: 157 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
Query: 271 ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330
++++ E + P E+ L+ L C +NRP V L N
Sbjct: 217 VTAMLEK---GERMGCPAGCPREMYDLMNL------CWTYDVENRPGFAAVELRLRNYYY 267
Query: 331 D 331
D
Sbjct: 268 D 268
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 60
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 117
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 79
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 138
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG Y+ Y
Sbjct: 139 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSYICSRY 192
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 61 DGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRL--VLSNAGFGFASVIKTLSLAQ 117
D F +G G G V+ + +G ++A K IH + + N ++ L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQVLHECN 81
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
P IV G + GE I E ++ SLD L + A + +++ +GL
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLT 137
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR----GLAGYVDDDYWH 233
YL + I+H +K SNIL+N + ++CD+G+S + G Y+ +
Sbjct: 138 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 195
Query: 234 EKGGGNATRESDVYGFGVVLLEILSGR 260
G + + +SD++ G+ L+E+ GR
Sbjct: 196 ---GTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 59
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 116
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 13/194 (6%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
+G G+ G V VA+K I + + A V+ LS H +V + G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS---HEKLVQLYGVC 88
Query: 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNII 188
I++E++ L YL E + L + +EYL + +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 189 HGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEKG---GGNATRES 244
H + A N L+N++ +V D+GLS ++ +E+ G W + +S
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 245 DVYGFGVVLLEILS 258
D++ FGV++ EI S
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 43/219 (19%)
Query: 63 FSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTL--SLAQHP 119
F R+IG+G V L T ++ A+K + LV + + K + + HP
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 120 NIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
+V + Q V E++N L F++ L + + R A + L YL
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAE-ISLALNYL 126
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGL------------------SFLAPEEKR 221
H+ II+ +K N+LL+ + ++ DYG+ +++APE R
Sbjct: 127 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
G D+W GV++ E+++GR
Sbjct: 184 GEDYGFSVDWW---------------ALGVLMFEMMAGR 207
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E G W+
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVA----TRWYRAPE 192
Query: 236 ---GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 119/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I+ LD+ H++N G+ LL+W ++ A+G+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 179
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 230
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 282
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 119/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I+ LD+ H++N G+ LL+W ++ A+G+
Sbjct: 77 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 177
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 228
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 102
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 161
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG Y+ Y
Sbjct: 162 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSYICSRY 215
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 119/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I+ LD+ H++N G+ LL+W ++ A+G+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 134
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 181
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 232
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 233 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 284
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 119/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I+ LD+ H++N G+ LL+W ++ A+G+
Sbjct: 80 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 180
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 231
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 119/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I+ LD+ H++N G+ LL+W ++ A+G+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 131
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 178
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 229
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 230 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 281
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 119/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I+ LD+ H++N G+ LL+W ++ A+G+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGM 131
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 178
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 229
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 230 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 281
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 39/225 (17%)
Query: 56 IDAATDGFSH------RRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFAS 108
I +ATD H ++ IG+G V A + TG+ VAVK I + +
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR 63
Query: 109 VIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRR 165
++ + + HPNIV + E I + + E G + D+ + R
Sbjct: 64 EVRIMKILNHPNIVKLF-------------EVIETEKTLYLVMEYASGGEVFDYLVAHGR 110
Query: 166 LRIATGAAR------GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--FLAP 217
++ A+ ++Y HQ I+H +KA N+LL+ ++ D+G S F
Sbjct: 111 MKEKEARAKFRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG 167
Query: 218 EEKRGLAG---YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
+ G Y + + +G E DV+ GV+L ++SG
Sbjct: 168 NKLDTFCGSPPYAAPELF--QGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 32/212 (15%)
Query: 68 IIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSL----AQHPNIV 122
++G G G VY + TG+L A+K V+ G + + +++ + H NI
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIK------VMDVTGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 123 PILGF---SQAPG---ERIIVSEFINMASLDFYLHENNDGASLLD-WNRRLRIATGAARG 175
G PG + +V EF S+ + +N G +L + W I RG
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI-KNTKGNTLKEEW--IAYICREILRG 141
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--- 232
L +LHQ +IH IK N+LL E ++ D+G+S ++ YW
Sbjct: 142 LSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
Query: 233 -----HEKGGGNATRESDVYGFGVVLLEILSG 259
E +SD++ G+ +E+ G
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 124
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 125 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 171
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 172 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 222
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 223 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 274
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 24/244 (9%)
Query: 52 PLTEI-DAATDGFSHRR-----IIGQGRLGTVYAALLSTGKLVAVKRIHPRLVL--SNAG 103
PL EI D D + +R +G+G Y K V ++ P+ +L +
Sbjct: 27 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 86
Query: 104 FGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWN 163
++ I +P++V GF + +V E SL LH+ + +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEAR 145
Query: 164 RRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF---LAPEEK 220
+R +G++YLH +IH +K N+ LN+ ++ D+GL+ E K
Sbjct: 146 YFMR---QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 221 RGLAG---YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE 277
+ L G Y+ + +KG + E D++ G +L +L G+ E +K IK+
Sbjct: 200 KTLCGTPNYIAPEVLCKKG---HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
Query: 278 MRFS 281
+S
Sbjct: 257 NEYS 260
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 41/191 (21%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ E+ + +L YL N + +
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG 222
+ ARG+EYL + IH + A N+L+ E ++ D+GL+ R
Sbjct: 203 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA-------RD 252
Query: 223 LAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ DY+ + G T +SDV+ FGV++ EI + G G+
Sbjct: 253 INNI---DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309
Query: 267 LVKWALPLIKE 277
V+ L+KE
Sbjct: 310 PVEELFKLLKE 320
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 180
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 231
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 102 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 155
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 156 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 202
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 203 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 253
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 254 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 305
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 24/244 (9%)
Query: 52 PLTEI-DAATDGFSHRR-----IIGQGRLGTVYAALLSTGKLVAVKRIHPRLVL--SNAG 103
PL EI D D + +R +G+G Y K V ++ P+ +L +
Sbjct: 27 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 86
Query: 104 FGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWN 163
++ I +P++V GF + +V E SL LH+ + +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEAR 145
Query: 164 RRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF---LAPEEK 220
+R +G++YLH +IH +K N+ LN+ ++ D+GL+ E K
Sbjct: 146 YFMR---QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 221 RGLAG---YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE 277
+ L G Y+ + +KG + E D++ G +L +L G+ E +K IK+
Sbjct: 200 KXLCGTPNYIAPEVLCKKG---HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
Query: 278 MRFS 281
+S
Sbjct: 257 NEYS 260
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 180
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 231
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 232 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 27/232 (11%)
Query: 107 ASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL 166
A+V++ L +P IV ++G +A ++V E + L+ YL +N +
Sbjct: 63 ANVMQQLD---NPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNII 114
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGY 226
+ + G++YL + N +H + A N+LL + A++ D+GLS ++
Sbjct: 115 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
Query: 227 VDDDY---WHEKGGGNATR---ESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMR 279
+ W+ N + +SDV+ FGV++ E S G++ G+ ++++
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-- 229
Query: 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGD 331
E + P E+ L+ L C +NRP V L N D
Sbjct: 230 -GERMGCPAGCPREMYDLMNL------CWTYDVENRPGFAAVELRLRNYYYD 274
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 177
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 228
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 83 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 136
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 137 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 183
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 184 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 234
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 235 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 286
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 108
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 167
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG Y+ Y
Sbjct: 168 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSYICSRY 221
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQHPN 120
F R +G G G V+ G+ A+K + +V+ + + LS+ HP
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLR------IATGAAR 174
I+ + G Q + ++ ++I L SLL ++R A
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGEL----------FSLLRKSQRFPNPVAKFYAAEVCL 117
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHE 234
LEYLH + +II+ +K NILL++ ++ D+G + P+ L G D
Sbjct: 118 ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEV 174
Query: 235 KGGGNATRESDVYGFGVVLLEILSG 259
+ D + FG+++ E+L+G
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 177
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 228
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 179
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 230
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 282
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 67 RIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ IG+G V A + TGK VAVK I + S++ ++ + + HPNIV +
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR----GLEYLHQ 181
+ +V E+ + + YL + W + + A R ++Y HQ
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYLVAHG-------WMKE-KEARAKFRQIVSAVQYCHQ 124
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLS--FLAPEEKRGLAG---YVDDDYWHEKG 236
I+H +KA N+LL+ ++ D+G S F + G Y + + +G
Sbjct: 125 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF--QG 179
Query: 237 GGNATRESDVYGFGVVLLEILSG 259
E DV+ GV+L ++SG
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 41/191 (21%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ E+ + +L YL N + +
Sbjct: 97 IGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG 222
+ ARG+EYL + IH + A N+L+ E ++ D+GL+ R
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA-------RD 206
Query: 223 LAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ DY+ + G T +SDV+ FGV++ EI + G G+
Sbjct: 207 INNI---DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
Query: 267 LVKWALPLIKE 277
V+ L+KE
Sbjct: 264 PVEELFKLLKE 274
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 40/217 (18%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 177
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS 258
GG T +SDV+ +GV + E+++
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 41/191 (21%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ E+ + +L YL N + +
Sbjct: 84 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG 222
+ ARG+EYL + IH + A N+L+ E ++ D+GL+ R
Sbjct: 144 KDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLA-------RD 193
Query: 223 LAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ DY+ + G T +SDV+ FGV++ EI + G G+
Sbjct: 194 INNI---DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 250
Query: 267 LVKWALPLIKE 277
V+ L+KE
Sbjct: 251 PVEELFKLLKE 261
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 16/196 (8%)
Query: 69 IGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G V A + S+GKLVAVK++ R F V+ + QH N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVV-IMRDYQHENVVEMYNS 139
Query: 128 SQAPGERIIVSEFINMASL-DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186
E +V EF+ +L D H + ++ + + + L LH A
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLH---AQG 190
Query: 187 IIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK---GGGNATRE 243
+IH IK+ +ILL ++ D+G +E V YW E
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 244 SDVYGFGVVLLEILSG 259
D++ G++++E++ G
Sbjct: 251 VDIWSLGIMVIEMVDG 266
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ IG+G V A + TGK VAV+ I + S++ ++ + + HPNIV +
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRLRIATGAAR------GL 176
E I + + E G + D+ + R++ A+ +
Sbjct: 80 -------------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--FLAPEEKRGLAG---YVDDDY 231
+Y HQ I+H +KA N+LL+ ++ D+G S F + G Y +
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL 183
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
+ +G E DV+ GV+L ++SG
Sbjct: 184 F--QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 40/217 (18%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 87 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 140
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 141 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 187
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS 258
GG T +SDV+ +GV + E+++
Sbjct: 188 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 47/218 (21%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFS 128
+G+GR G V+ L G+ VAVK R + F + T+ L +H NI LGF
Sbjct: 16 VGKGRYGEVWRGLWH-GESVAVKIFSSRD--EQSWFRETEIYNTV-LLRHDNI---LGF- 67
Query: 129 QAPGERIIVSEFI--NMASLDFYLHENNDGASLLDWNRR--------LRIATGAARGLEY 178
I S+ N ++ + + ++ SL D+ +R LR+A AA GL +
Sbjct: 68 -------IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAH 120
Query: 179 LH------QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-------------- 218
LH QG P I H K+ N+L+ + D GL+ + +
Sbjct: 121 LHVEIFGTQG-KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVG 179
Query: 219 EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEI 256
KR +A V D+ + + +D++ FG+VL EI
Sbjct: 180 TKRYMAPEVLDEQ-IRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ IG+G V A + TGK VAV+ I + S++ ++ + + HPNIV +
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRLRIATGAAR------GL 176
E I + + E G + D+ + R++ A+ +
Sbjct: 80 -------------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP-----EEKRGLAGYVDDDY 231
+Y HQ I+H +KA N+LL+ ++ D+G S +E G Y +
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPEL 183
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
+ +G E DV+ GV+L ++SG
Sbjct: 184 F--QGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 16/196 (8%)
Query: 69 IGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G V A + S+GKLVAVK++ R F V+ + QH N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVV-IMRDYQHENVVEMYNS 216
Query: 128 SQAPGERIIVSEFINMASL-DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186
E +V EF+ +L D H + ++ + + + L LH A
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLH---AQG 267
Query: 187 IIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK---GGGNATRE 243
+IH IK+ +ILL ++ D+G +E V YW E
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 244 SDVYGFGVVLLEILSG 259
D++ G++++E++ G
Sbjct: 328 VDIWSLGIMVIEMVDG 343
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 40/217 (18%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 180
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS 258
GG T +SDV+ +GV + E+++
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 110
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 169
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG Y+ Y
Sbjct: 170 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSYICSRY 223
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 184
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 235
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASV----IKTLSLAQHPNIVP 123
IGQG G V+ A TG+ VA+K++ ++ N GF IK L L +H N+V
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV----LMENEKEGFPITALREIKILQLLKHENVVN 80
Query: 124 ILGFSQ---APGERIIVSEFINMASLDFYLHENNDGASLLD-------WNRRLRIATGAA 173
++ + +P R S ++ DF H D A LL + R+
Sbjct: 81 LIEICRTKASPYNRCKGSIYL---VFDFCEH---DLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL Y+H+ I+H +KA+N+L+ ++ D+GL+
Sbjct: 135 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 46/214 (21%)
Query: 67 RIIGQGRLGTVYAALLST----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
R IG+G+ G V+ + + VA+K + F T+ HP+IV
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 123 PILG-FSQAPGERIIVSEFINMASLDFYLHENN---DGASLLDWNRRLRIATGAARGLEY 178
++G ++ P I+ E + L +L D ASL+ + +L A +
Sbjct: 75 KLIGVITENPV--WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG 238
+H+ +A A N+L++ C ++ D+GLS Y++D +++ G
Sbjct: 133 VHRDIA---------ARNVLVSSNDCVKLGDFGLS-----------RYMEDSTYYKASKG 172
Query: 239 NA---------------TRESDVYGFGVVLLEIL 257
T SDV+ FGV + EIL
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 46/214 (21%)
Query: 67 RIIGQGRLGTVYAALLSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
R IG+G+ G V+ + + + VA+K + F T+ HP+IV
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 123 PILG-FSQAPGERIIVSEFINMASLDFYLHENN---DGASLLDWNRRLRIATGAARGLEY 178
++G ++ P I+ E + L +L D ASL+ + +L A +
Sbjct: 75 KLIGVITENPV--WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG 238
+H+ +A A N+L++ C ++ D+GLS Y++D +++ G
Sbjct: 133 VHRDIA---------ARNVLVSSNDCVKLGDFGLS-----------RYMEDSTYYKASKG 172
Query: 239 NA---------------TRESDVYGFGVVLLEIL 257
T SDV+ FGV + EIL
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 46/214 (21%)
Query: 67 RIIGQGRLGTVYAALLSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
R IG+G+ G V+ + + + VA+K + F T+ HP+IV
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 123 PILG-FSQAPGERIIVSEFINMASLDFYLHENN---DGASLLDWNRRLRIATGAARGLEY 178
++G ++ P I+ E + L +L D ASL+ + +L A +
Sbjct: 72 KLIGVITENPV--WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 129
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG 238
+H+ +A A N+L++ C ++ D+GLS Y++D +++ G
Sbjct: 130 VHRDIA---------ARNVLVSSNDCVKLGDFGLS-----------RYMEDSTYYKASKG 169
Query: 239 NA---------------TRESDVYGFGVVLLEIL 257
T SDV+ FGV + EIL
Sbjct: 170 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 114 SLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
+A HP+I+ ++ ++ +V + + L YL E +L + R I
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETR-SIMRSLL 210
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR----GLAGYVD 228
+ +LH A NI+H +K NILL++ R+ D+G S L P EK G GY+
Sbjct: 211 EAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLA 267
Query: 229 DDYWH---EKGGGNATRESDVYGFGVVLLEILSG 259
+ ++ +E D++ GV+L +L+G
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 153
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 212
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG Y+ Y
Sbjct: 213 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSYICSRY 266
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASV----IKTLSLAQHPNIVP 123
IGQG G V+ A TG+ VA+K++ ++ N GF IK L L +H N+V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV----LMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 124 ILGFSQ---APGERIIVSEFINMASLDFYLHENNDGASLLD-------WNRRLRIATGAA 173
++ + +P R S ++ DF H D A LL + R+
Sbjct: 82 LIEICRTKASPYNRCKGSIYL---VFDFCEH---DLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL Y+H+ I+H +KA+N+L+ ++ D+GL+
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 41/191 (21%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ E+ + +L YL N + +
Sbjct: 89 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 148
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG 222
+ ARG+EYL + IH + A N+L+ E ++ D+GL+ R
Sbjct: 149 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA-------RD 198
Query: 223 LAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ DY+ + G T +SDV+ FGV++ EI + G G+
Sbjct: 199 INNI---DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 255
Query: 267 LVKWALPLIKE 277
V+ L+KE
Sbjct: 256 PVEELFKLLKE 266
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 112
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 171
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG Y+ Y
Sbjct: 172 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSYICSRY 225
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASV----IKTLSLAQHPNIVP 123
IGQG G V+ A TG+ VA+K++ ++ N GF IK L L +H N+V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV----LMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 124 ILGFSQ---APGERIIVSEFINMASLDFYLHENNDGASLLD-------WNRRLRIATGAA 173
++ + +P R S ++ DF H D A LL + R+
Sbjct: 82 LIEICRTKASPYNRCKGSIYL---VFDFCEH---DLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
GL Y+H+ I+H +KA+N+L+ ++ D+GL+
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 46/214 (21%)
Query: 67 RIIGQGRLGTVYAALLSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
R IG+G+ G V+ + + + VA+K + F T+ HP+IV
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 123 PILG-FSQAPGERIIVSEFINMASLDFYLHENN---DGASLLDWNRRLRIATGAARGLEY 178
++G ++ P I+ E + L +L D ASL+ + +L A +
Sbjct: 77 KLIGVITENPV--WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 134
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG 238
+H+ +A A N+L++ C ++ D+GLS Y++D +++ G
Sbjct: 135 VHRDIA---------ARNVLVSSNDCVKLGDFGLS-----------RYMEDSTYYKASKG 174
Query: 239 NA---------------TRESDVYGFGVVLLEIL 257
T SDV+ FGV + EIL
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 43/219 (19%)
Query: 63 FSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTL--SLAQHP 119
F R+IG+G V L T ++ A++ + LV + + K + + HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 120 NIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
+V + Q V E++N L F++ L + + R A + L YL
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAE-ISLALNYL 169
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGL------------------SFLAPEEKR 221
H+ II+ +K N+LL+ + ++ DYG+ +++APE R
Sbjct: 170 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 226
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
G D+W GV++ E+++GR
Sbjct: 227 GEDYGFSVDWW---------------ALGVLMFEMMAGR 250
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 41/191 (21%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ E+ + +L YL N + +
Sbjct: 97 IGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG 222
+ ARG+EYL + IH + A N+L+ E ++ D+GL+ R
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA-------RD 206
Query: 223 LAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ DY+ + G T +SDV+ FGV++ EI + G G+
Sbjct: 207 INNI---DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
Query: 267 LVKWALPLIKE 277
V+ L+KE
Sbjct: 264 PVEELFKLLKE 274
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 46/214 (21%)
Query: 67 RIIGQGRLGTVYAALLSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
R IG+G+ G V+ + + + VA+K + F T+ HP+IV
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 123 PILG-FSQAPGERIIVSEFINMASLDFYLHENN---DGASLLDWNRRLRIATGAARGLEY 178
++G ++ P I+ E + L +L D ASL+ + +L A +
Sbjct: 78 KLIGVITENPV--WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 135
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG 238
+H+ +A A N+L++ C ++ D+GLS Y++D +++ G
Sbjct: 136 VHRDIA---------ARNVLVSSNDCVKLGDFGLS-----------RYMEDSTYYKASKG 175
Query: 239 NA---------------TRESDVYGFGVVLLEIL 257
T SDV+ FGV + EIL
Sbjct: 176 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 91/217 (41%), Gaps = 40/217 (18%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W A+G+
Sbjct: 111 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 164
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 165 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 211
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS 258
GG T +SDV+ +GV + E+++
Sbjct: 212 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 41/191 (21%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ E+ + +L YL N + +
Sbjct: 86 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG 222
+ ARG+EYL + IH + A N+L+ E ++ D+GL+ R
Sbjct: 146 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA-------RD 195
Query: 223 LAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ DY+ + G T +SDV+ FGV++ EI + G G+
Sbjct: 196 INNI---DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 252
Query: 267 LVKWALPLIKE 277
V+ L+KE
Sbjct: 253 PVEELFKLLKE 263
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 46/214 (21%)
Query: 67 RIIGQGRLGTVYAALLSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
R IG+G+ G V+ + + + VA+K + F T+ HP+IV
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 123 PILG-FSQAPGERIIVSEFINMASLDFYLHENN---DGASLLDWNRRLRIATGAARGLEY 178
++G ++ P I+ E + L +L D ASL+ + +L A +
Sbjct: 103 KLIGVITENPV--WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 160
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG 238
+H+ +A A N+L++ C ++ D+GLS Y++D +++ G
Sbjct: 161 VHRDIA---------ARNVLVSSNDCVKLGDFGLS-----------RYMEDSTYYKASKG 200
Query: 239 NA---------------TRESDVYGFGVVLLEIL 257
T SDV+ FGV + EIL
Sbjct: 201 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 46/214 (21%)
Query: 67 RIIGQGRLGTVYAALLSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
R IG+G+ G V+ + + + VA+K + F T+ HP+IV
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 123 PILG-FSQAPGERIIVSEFINMASLDFYLHENN---DGASLLDWNRRLRIATGAARGLEY 178
++G ++ P I+ E + L +L D ASL+ + +L A +
Sbjct: 80 KLIGVITENPV--WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 137
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG 238
+H+ +A A N+L++ C ++ D+GLS Y++D +++ G
Sbjct: 138 VHRDIA---------ARNVLVSSNDCVKLGDFGLS-----------RYMEDSTYYKASKG 177
Query: 239 NA---------------TRESDVYGFGVVLLEIL 257
T SDV+ FGV + EIL
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLKEL 58
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARG- 175
HPNIV +L + +V E H + D + +D + I +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFE-----------HVHQDLKTFMDASALTGIPLPLIKSY 107
Query: 176 LEYLHQGVA----PNIIHGCIKASNILLNEKFCARVCDYGLS 213
L L QG+A ++H +K N+L+N + ++ D+GL+
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 41/191 (21%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ E+ + +L YL N + +
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG 222
+ ARG+EYL + IH + A N+L+ E ++ D+GL+ R
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA-------RD 206
Query: 223 LAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ DY+ + G T +SDV+ FGV++ EI + G G+
Sbjct: 207 INNI---DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
Query: 267 LVKWALPLIKE 277
V+ L+KE
Sbjct: 264 PVEELFKLLKE 274
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 46/214 (21%)
Query: 67 RIIGQGRLGTVYAALLST----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
R IG+G+ G V+ + + VA+K + F T+ HP+IV
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 123 PILG-FSQAPGERIIVSEFINMASLDFYLHENN---DGASLLDWNRRLRIATGAARGLEY 178
++G ++ P I+ E + L +L D ASL+ + +L A +
Sbjct: 75 KLIGVITENPV--WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG 238
+H+ +A A N+L++ C ++ D+GLS Y++D +++ G
Sbjct: 133 VHRDIA---------ARNVLVSATDCVKLGDFGLS-----------RYMEDSTYYKASKG 172
Query: 239 NA---------------TRESDVYGFGVVLLEIL 257
T SDV+ FGV + EIL
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 117/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A G+
Sbjct: 74 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEGM 127
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 128 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 174
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 175 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 225
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 226 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 277
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 42/233 (18%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G+GR G V+ G+ VAVK R + F + T+ L +H NI LGF
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRD--EKSWFRETELYNTVML-RHENI---LGFI 68
Query: 128 ------SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH- 180
+ + +++ + M SL YL + LD LRI A GL +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 181 -----QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE--------------KR 221
QG P I H +K+ NIL+ + + D GL+ + + KR
Sbjct: 124 EIFGTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPL 274
+A V D+ + ++ + D++ FG+VL E+ + R G++ + P
Sbjct: 183 YMAPEVLDET-IQVDCFDSYKRVDIWAFGLVLWEV-ARRMVSNGIVEDYKPPF 233
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 42/233 (18%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G+GR G V+ G+ VAVK R + F + T+ L +H NI LGF
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRD--EKSWFRETELYNTVML-RHENI---LGFI 68
Query: 128 ------SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH- 180
+ + +++ + M SL YL + LD LRI A GL +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 181 -----QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE--------------KR 221
QG P I H +K+ NIL+ + + D GL+ + + KR
Sbjct: 124 EIFGTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPL 274
+A V D+ + ++ + D++ FG+VL E+ + R G++ + P
Sbjct: 183 YMAPEVLDET-IQVDCFDSYKRVDIWAFGLVLWEV-ARRMVSNGIVEDYKPPF 233
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ + F IG+G G VY A TG++VA+K+I RL G ++ I+ +SL +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVP-STAIREISLLK 60
Query: 118 ---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
HPNIV +L + +V E H + D +D + I +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFE-----------HVDQDLKKFMDASALTGIPLPLIK 109
Query: 175 G-LEYLHQGVA----PNIIHGCIKASNILLNEKFCARVCDYGLS 213
L L QG+A ++H +K N+L+N + ++ D+GL+
Sbjct: 110 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 41/175 (23%)
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW 232
A+G+E+L + IH + A NILL+EK ++CD+GL+ R + Y D DY
Sbjct: 210 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA-------RDI--YKDPDYV 257
Query: 233 HEKGGGN---------------ATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK- 276
KG T +SDV+ FGV+L EI S L P +K
Sbjct: 258 R-KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------LGASPYPGVKI 308
Query: 277 EMRFSELLD--PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
+ F L R+ P P + + L C RP+ ++ L NL+
Sbjct: 309 DEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 361
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 90/217 (41%), Gaps = 17/217 (7%)
Query: 53 LTEIDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK 111
L E D D R ++G+G G VYA LS +A+K I R S I
Sbjct: 14 LLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIA 71
Query: 112 TLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATG 171
+H NIV LG G I E + SL L + L D + + T
Sbjct: 72 LHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR--SKWGPLKDNEQTIGFYTK 129
Query: 172 AA-RGLEYLHQGVAPNIIHGCIKASNILLNE-KFCARVCDYG----LSFLAP--EEKRGL 223
GL+YLH I+H IK N+L+N ++ D+G L+ + P E G
Sbjct: 130 QILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGT 186
Query: 224 AGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
Y+ + +KG + +D++ G ++E+ +G+
Sbjct: 187 LQYMAPEII-DKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 18/197 (9%)
Query: 69 IGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G V A TGK VAVK++ R F V+ + H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLR-KQQRRELLFNEVV-IMRDYHHDNVVDMYSS 110
Query: 128 SQAPGERIIVSEFINMASL-DFYLHENNDGASLLDWNRRLRIATGAARGLEYLH-QGVAP 185
E +V EF+ +L D H + + + R L YLH QGV
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYLHNQGV-- 162
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNAT---R 242
IH IK+ +ILL ++ D+G +E V YW +
Sbjct: 163 --IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 243 ESDVYGFGVVLLEILSG 259
E D++ G++++E++ G
Sbjct: 221 EVDIWSLGIMVIEMIDG 237
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 46/214 (21%)
Query: 67 RIIGQGRLGTVYAALLST----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
R IG+G+ G V+ + + VA+K + F T+ HP+IV
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 123 PILG-FSQAPGERIIVSEFINMASLDFYLHENN---DGASLLDWNRRLRIATGAARGLEY 178
++G ++ P I+ E + L +L D ASL+ + +L A +
Sbjct: 455 KLIGVITENPV--WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG 238
+H+ +A A N+L++ C ++ D+GLS Y++D +++ G
Sbjct: 513 VHRDIA---------ARNVLVSSNDCVKLGDFGLS-----------RYMEDSTYYKASKG 552
Query: 239 NA---------------TRESDVYGFGVVLLEIL 257
T SDV+ FGV + EIL
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 41/175 (23%)
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW 232
A+G+E+L + IH + A NILL+EK ++CD+GL+ R + Y D DY
Sbjct: 201 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA-------RDI--YKDPDYV 248
Query: 233 HEKGGGN---------------ATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK- 276
KG T +SDV+ FGV+L EI S L P +K
Sbjct: 249 R-KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------LGASPYPGVKI 299
Query: 277 EMRFSELLD--PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
+ F L R+ P P + + L C RP+ ++ L NL+
Sbjct: 300 DEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 352
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V AA TG VAVK++ P + +A + ++ L +H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 89 VFTPARS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ +GL+ +E + GYV ++
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE---MTGYVATRWYRAPEI 193
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ + D++ G ++ E+L+GR
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 41/191 (21%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ E+ + +L YL N + +
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG 222
+ ARG+EYL + IH + A N+L+ E ++ D+GL+ R
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA-------RD 206
Query: 223 LAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ DY+ G T +SDV+ FGV++ EI + G G+
Sbjct: 207 INNI---DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
Query: 267 LVKWALPLIKE 277
V+ L+KE
Sbjct: 264 PVEELFKLLKE 274
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 41/175 (23%)
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW 232
A+G+E+L + IH + A NILL+EK ++CD+GL+ R + Y D DY
Sbjct: 208 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA-------RDI--YKDPDYV 255
Query: 233 HEKGGGN---------------ATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK- 276
KG T +SDV+ FGV+L EI S L P +K
Sbjct: 256 R-KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------LGASPYPGVKI 306
Query: 277 EMRFSELLD--PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
+ F L R+ P P + + L C RP+ ++ L NL+
Sbjct: 307 DEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 359
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 41/175 (23%)
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW 232
A+G+E+L + IH + A NILL+EK ++CD+GL+ R + Y D DY
Sbjct: 203 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA-------RDI--YKDPDYV 250
Query: 233 HEKGGGN---------------ATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK- 276
KG T +SDV+ FGV+L EI S L P +K
Sbjct: 251 R-KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------LGASPYPGVKI 301
Query: 277 EMRFSELLD--PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
+ F L R+ P P + + L C RP+ ++ L NL+
Sbjct: 302 DEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ IG+G V A + TGK VAVK I + S++ ++ + HPNIV +
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
+ +V E+ + + YL + + +I + ++Y HQ
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS----AVQYCHQKF-- 133
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS--FLAPEEKRGLAG---YVDDDYWHEKGGGNA 240
I+H +KA N+LL+ ++ D+G S F + G Y + + +G
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF--QGKKYD 190
Query: 241 TRESDVYGFGVVLLEILSG 259
E DV+ GV+L ++SG
Sbjct: 191 GPEVDVWSLGVILYTLVSG 209
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 42/233 (18%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF- 127
+G+GR G V+ G+ VAVK R + F + T+ L +H NI LGF
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRD--EKSWFRETELYNTVML-RHENI---LGFI 97
Query: 128 ------SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH- 180
+ + +++ + M SL YL + LD LRI A GL +LH
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 181 -----QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE--------------KR 221
QG P I H +K+ NIL+ + + D GL+ + + KR
Sbjct: 153 EIFGTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPL 274
+A V D+ + ++ + D++ FG+VL E+ + R G++ + P
Sbjct: 212 YMAPEVLDET-IQVDCFDSYKRVDIWAFGLVLWEV-ARRMVSNGIVEDYKPPF 262
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 15/182 (8%)
Query: 84 TGKLVAVKRIHPRLVLSNAGFG-FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFIN 142
TG VAVK ++ + + S G I+ L L +HP+I+ + P + +V E+++
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202
L Y+ ++ + R+ ++Y H+ + ++H +K N+LL+
Sbjct: 95 GGELFDYICKHGRVEEM----EARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAH 147
Query: 203 FCARVCDYGLSFLAPE-----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL 257
A++ D+GLS + + + G Y + G A E D++ GV+L +L
Sbjct: 148 MNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVI--SGRLYAGPEVDIWSCGVILYALL 205
Query: 258 SG 259
G
Sbjct: 206 CG 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 34/216 (15%)
Query: 60 TDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKR----IHPRLVLSNAGFGFASVIKTLSL 115
++ + + +G G G V LL K+ V+R I V +++ + L L
Sbjct: 36 SEMYQRVKKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKL 92
Query: 116 AQHPNIVPILGFSQAPGERIIVSEFINMASL-DFYLHE---NNDGASLLDWNRRLRIATG 171
HPNI+ + F + +V E L D +H N A++ I
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV--------IIKQ 144
Query: 172 AARGLEYLHQGVAPNIIHGCIKASNILLNEK---FCARVCDYGLSFLAPEEKR-----GL 223
G+ YLH+ NI+H +K N+LL K ++ D+GLS + +K+ G
Sbjct: 145 VLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT 201
Query: 224 AGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
A Y+ + +K + DV+ GV+L +L+G
Sbjct: 202 AYYIAPEVLRKK----YDEKCDVWSIGVILFILLAG 233
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+ +I RL G ++ I+ +SL +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVP-STAIREISLLKEL 59
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 116
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-- 117
+ F IG+G G VY A TG++VA+ +I RL G ++ I+ +SL +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVP-STAIREISLLKEL 58
Query: 118 -HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
HPNIV +L + +V EF++ F G L L +GL
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 115
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+ H ++H +K N+L+N + ++ D+GL+
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 46/214 (21%)
Query: 67 RIIGQGRLGTVYAALLST----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
R IG+G+ G V+ + + VA+K + F T+ HP+IV
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 123 PILG-FSQAPGERIIVSEFINMASLDFYLHENN---DGASLLDWNRRLRIATGAARGLEY 178
++G ++ P I+ E + L +L D ASL+ + +L A +
Sbjct: 455 KLIGVITENPV--WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG 238
+H+ +A A N+L++ C ++ D+GLS Y++D +++ G
Sbjct: 513 VHRDIA---------ARNVLVSATDCVKLGDFGLS-----------RYMEDSTYYKASKG 552
Query: 239 NA---------------TRESDVYGFGVVLLEIL 257
T SDV+ FGV + EIL
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL F ++ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQGKAFKNRE-LQIMRKLDHCN 74
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 133
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
L Y+H I H IK N+LL+ + ++CD+G + + ++ Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 234 EK---GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 75
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 134
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG + Y
Sbjct: 135 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSXICSRY 188
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 11/180 (6%)
Query: 84 TGKLVAVKRIHPRLVLSNAGFG-FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFIN 142
TG VAVK ++ + + S G I+ L L +HP+I+ + P + +V E+++
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202
L Y+ ++ + R+ ++Y H+ + ++H +K N+LL+
Sbjct: 95 GGELFDYICKHGRVEEM----EARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAH 147
Query: 203 FCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK---GGGNATRESDVYGFGVVLLEILSG 259
A++ D+GLS + + + +Y + G A E D++ GV+L +L G
Sbjct: 148 MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 74
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 133
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG + Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSXICSRY 187
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 19/218 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRL-VLSNAGFGFASVIKTLSLAQH 118
D + IG G G V +A TG+ VA+K+I V++NA +K L +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRE-LKILKHFKH 112
Query: 119 PNIVPI---LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARG 175
NI+ I L + GE V +++ D LH+ + L RG
Sbjct: 113 DNIIAIKDILRPTVPYGEFKSVYVVLDLMESD--LHQIIHSSQPLTLEHVRYFLYQLLRG 170
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF---LAPEEKRGLAGYVDDDYW 232
L+Y+H +IH +K SN+L+NE ++ D+G++ +P E + W
Sbjct: 171 LKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 233 HEKGG-----GNATRESDVYGFGVVLLEILSGRRCEEG 265
+ T+ D++ G + E+L+ R+ G
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Query: 64 SHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+H+ +G+G G V+ TG AVK++ + + A + P IV
Sbjct: 77 THQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS-------PRIV 129
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQG 182
P+ G + I E + SL + E L +R L A GLEYLH
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLVKEQG----CLPEDRALYYLGQALEGLEYLH-- 183
Query: 183 VAPNIIHGCIKASNILLNEKFC-ARVCDYG 211
+ I+HG +KA N+LL+ A +CD+G
Sbjct: 184 -SRRILHGDVKADNVLLSSDGSHAALCDFG 212
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 74
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 133
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG + Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSXICSRY 187
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Query: 64 SHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+H+ +G+G G V+ TG AVK++ + + A + P IV
Sbjct: 96 THQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS-------PRIV 148
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQG 182
P+ G + I E + SL + E L +R L A GLEYLH
Sbjct: 149 PLYGAVREGPWVNIFMELLEGGSLGQLVKEQG----CLPEDRALYYLGQALEGLEYLH-- 202
Query: 183 VAPNIIHGCIKASNILLNEKFC-ARVCDYG 211
+ I+HG +KA N+LL+ A +CD+G
Sbjct: 203 -SRRILHGDVKADNVLLSSDGSHAALCDFG 231
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ F R++G+G G V A + +TGK+ A K++ + + G A K +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 118 HPNIVPILGFSQAPGERI-IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+ V L ++ + + +V +N L F+++ + G + R + A GL
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY--HMGQAGFPEARAVFYAAEICCGL 299
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-----GLAGYVDDDY 231
E LH+ I++ +K NILL++ R+ D GL+ PE + G GY+ +
Sbjct: 300 EDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSGR 260
+ T D + G +L E+++G+
Sbjct: 357 VKNE---RYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 74
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 133
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGL--AGYVDDDY 231
L Y+H I H IK N+LL+ + ++CD+G A + RG + Y
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG---SAKQLVRGEPNVSXICSRY 187
Query: 232 WHEK----GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 17/215 (7%)
Query: 55 EIDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTL 113
E D D R ++G+G G VYA LS +A+K I R S I
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALH 59
Query: 114 SLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
+H NIV LG G I E + SL L + L D + + T
Sbjct: 60 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR--SKWGPLKDNEQTIGFYTKQI 117
Query: 174 -RGLEYLHQGVAPNIIHGCIKASNILLNE-KFCARVCDYG----LSFLAP--EEKRGLAG 225
GL+YLH I+H IK N+L+N ++ D+G L+ + P E G
Sbjct: 118 LEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ 174
Query: 226 YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
Y+ + +KG + +D++ G ++E+ +G+
Sbjct: 175 YMAPEII-DKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I+ LD+ H++N G+ LL+W ++ A+G+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 134
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+G + L EEK +H +
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----------YHAE 181
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 232
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 233 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 284
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++ G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I+ LD+ H++N G+ LL+W ++ A+G+
Sbjct: 84 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 184
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 235
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V ++ + +G +AVK++ P + +A + ++ L +H N++ +L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 117
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA--------RGLE 177
F+ A + EF D YL + GA L + + ++ RGL+
Sbjct: 118 VFTPATS----LEEFN-----DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 168
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK-- 235
Y+H +IIH +K SN+ +NE ++ D+GL+ +E + GYV ++
Sbjct: 169 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEI 222
Query: 236 --GGGNATRESDVYGFGVVLLEILSGR 260
+ D++ G ++ E+L+GR
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 78
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 137
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
L Y+H I H IK N+LL+ + ++CD+G + + ++ Y
Sbjct: 138 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 194
Query: 234 EK---GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 195 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 118/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I+ LD+ H++N G+ LL+W ++ A+G+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+G + L EEK +H +
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----------YHAE 179
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 230
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 231 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 282
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 93
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 152
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
L Y+H I H IK N+LL+ + ++CD+G + + ++ Y
Sbjct: 153 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 209
Query: 234 EK---GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
+H+ +G+G G V+ TG AVK++ RL + F ++ L+ P I
Sbjct: 76 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV--RLEV----FRVEELVACAGLSS-PRI 128
Query: 122 VPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
VP+ G + I E + SL + + L +R L A GLEYLH
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLH- 183
Query: 182 GVAPNIIHGCIKASNILLNEKFC-ARVCDYG 211
I+HG +KA N+LL+ A +CD+G
Sbjct: 184 --TRRILHGDVKADNVLLSSDGSRAALCDFG 212
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 82
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 141
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
L Y+H I H IK N+LL+ + ++CD+G + + ++ Y
Sbjct: 142 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 198
Query: 234 EK---GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 40/217 (18%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I+ LD+ H++N G+ LL+W ++ A+G+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+G + L EEK +H +
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----------YHAE 179
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS 258
GG T +SDV+ +GV + E+++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 117/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++ G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 177
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 228
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 86
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 145
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
L Y+H I H IK N+LL+ + ++CD+G + + ++ Y
Sbjct: 146 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 202
Query: 234 EK---GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 19/218 (8%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRL-VLSNAGFGFASVIKTLSLAQH 118
D + IG G G V +A TG+ VA+K+I V++NA +K L +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRE-LKILKHFKH 113
Query: 119 PNIVPI---LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARG 175
NI+ I L + GE V +++ D LH+ + L RG
Sbjct: 114 DNIIAIKDILRPTVPYGEFKSVYVVLDLMESD--LHQIIHSSQPLTLEHVRYFLYQLLRG 171
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF---LAPEEKRGLAGYVDDDYW 232
L+Y+H +IH +K SN+L+NE ++ D+G++ +P E + W
Sbjct: 172 LKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 233 HEKGG-----GNATRESDVYGFGVVLLEILSGRRCEEG 265
+ T+ D++ G + E+L+ R+ G
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 266
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ 117
+ F R++G+G G V A + +TGK+ A K++ + + G A K +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 118 HPNIVPILGFSQAPGERI-IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+ V L ++ + + +V +N L F+++ + G + R + A GL
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY--HMGQAGFPEARAVFYAAEICCGL 299
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-----GLAGYVDDDY 231
E LH+ I++ +K NILL++ R+ D GL+ PE + G GY+ +
Sbjct: 300 EDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSGR 260
+ T D + G +L E+++G+
Sbjct: 357 VKNE---RYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 33/208 (15%)
Query: 67 RIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ IG+G V A + TG+ VA+K I + + ++ + + HPNIV +
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRLRIATGAAR------GL 176
E I + + E G + D+ + R++ ++ +
Sbjct: 81 -------------EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV 127
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--FLAPEEKRGLAG---YVDDDY 231
+Y HQ I+H +KA N+LL+ ++ D+G S F + G Y +
Sbjct: 128 QYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPEL 184
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
+ +G E DV+ GV+L ++SG
Sbjct: 185 F--QGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 51/196 (26%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ E+ + +L YL N + +
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF 156
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--------- 213
+ ARG+EYL + IH + A N+L+ E ++ D+GL+
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 214 -----------FLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRR 261
++APE D Y H +SDV+ FGV++ EI + G
Sbjct: 214 KKTTNGRLPVKWMAPE------ALFDRVYTH---------QSDVWSFGVLMWEIFTLGGS 258
Query: 262 CEEGLLVKWALPLIKE 277
G+ V+ L+KE
Sbjct: 259 PYPGIPVEELFKLLKE 274
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
+H+ +G+G G V+ TG AVK++ RL + F ++ L+ P I
Sbjct: 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV--RLEV----FRVEELVACAGLSS-PRI 112
Query: 122 VPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
VP+ G + I E + SL + + L +R L A GLEYLH
Sbjct: 113 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLH- 167
Query: 182 GVAPNIIHGCIKASNILLNEKFC-ARVCDYG 211
I+HG +KA N+LL+ A +CD+G
Sbjct: 168 --TRRILHGDVKADNVLLSSDGSRAALCDFG 196
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 51/196 (26%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ E+ + +L YL N + +
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--------- 213
+ ARG+EYL + IH + A N+L+ E ++ D+GL+
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 214 -----------FLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRR 261
++APE D Y H +SDV+ FGV++ EI + G
Sbjct: 214 KKTTNGRLPVKWMAPE------ALFDRVYTH---------QSDVWSFGVLMWEIFTLGGS 258
Query: 262 CEEGLLVKWALPLIKE 277
G+ V+ L+KE
Sbjct: 259 PYPGIPVEELFKLLKE 274
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 117/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+G + L EEK +H +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----------YHAE 177
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 228
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 86
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 145
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
L Y+H I H IK N+LL+ + ++CD+G + + ++ Y
Sbjct: 146 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 202
Query: 234 EK---GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 39/225 (17%)
Query: 67 RIIGQGRLGTVYAA----LLSTGK--LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
+++G G G V A + TG VAVK + + S + + L H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLH-------------------ENNDGASLLD 161
IV +LG G ++ E+ L YL E + ++L
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-------- 213
+ L A A+G+E+L + +H + A N+L+ ++CD+GL+
Sbjct: 171 FEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 214 FLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS 258
++ R ++ + E G T +SDV+ +G++L EI S
Sbjct: 228 YVVRGNARLPVKWMAPESLFE---GIYTIKSDVWSYGILLWEIFS 269
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 114 SLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
SLA H ++V GF + +V E SL LH+ + + LR
Sbjct: 73 SLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLR---QIV 127
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP---EEKRGLAG---YV 227
G +YLH+ +IH +K N+ LNE ++ D+GL+ E K+ L G Y+
Sbjct: 128 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI 184
Query: 228 DDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287
+ +KG + E DV+ G ++ +L G+ E +K IK+ +S
Sbjct: 185 APEVLSKKG---HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS------ 235
Query: 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQV 321
IP I P+ A + + RP+I ++
Sbjct: 236 --IPKHINPVA--ASLIQKMLQTDPTARPTINEL 265
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 89/214 (41%), Gaps = 31/214 (14%)
Query: 62 GFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTL--SLAQHP 119
F + ++G G GT+ + + VAVKRI P F FA L +HP
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC------FSFADREVQLLRESDEHP 78
Query: 120 NIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASL-LDWNRRLRIATGAARGLEY 178
N++ + + I E + A+L Y+ E D A L L+ L+ T GL +
Sbjct: 79 NVIRYFCTEKDRQFQYIAIE-LCAATLQEYV-EQKDFAHLGLEPITLLQQTTS---GLAH 133
Query: 179 LHQGVAPNIIHGCIKASNILLNE-----KFCARVCDYGL---------SFLAPEEKRGLA 224
LH + NI+H +K NIL++ K A + D+GL SF G
Sbjct: 134 LH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 225 GYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS 258
G++ + E N T D++ G V ++S
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 117/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++ G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+GL+ L EEK +H +
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----------YHAE 184
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 235
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 114 SLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
SLA H ++V GF + +V E SL LH+ + + LR
Sbjct: 77 SLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLR---QIV 131
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP---EEKRGLAG---YV 227
G +YLH+ +IH +K N+ LNE ++ D+GL+ E K+ L G Y+
Sbjct: 132 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI 188
Query: 228 DDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287
+ +KG + E DV+ G ++ +L G+ E +K IK+ +S
Sbjct: 189 APEVLSKKG---HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS------ 239
Query: 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQV 321
IP I P+ A + + RP+I ++
Sbjct: 240 --IPKHINPVA--ASLIQKMLQTDPTARPTINEL 269
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 40/217 (18%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+G + L EEK +H +
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----------YHAE 179
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS 258
GG T +SDV+ +GV + E+++
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 117/292 (40%), Gaps = 50/292 (17%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIK---TLSLAQH 118
F +++G G GTVY L + G+ V + L + + ++ ++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYL-HENNDGAS-LLDWNRRLRIATGAARGL 176
P++ +LG ++I LD+ H++N G+ LL+W ++ A+G+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKRGLAGYVDDDYWHEK 235
YL ++H + A N+L+ ++ D+G + L EEK +H +
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----------YHAE 184
Query: 236 GGGNA--------------TRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280
GG T +SDV+ +GV + E+++ G + +G I
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG---------IPASEI 235
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332
S +L+ +P + + + + C +RP ++ + + DP
Sbjct: 236 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 114 SLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
SLA H ++V GF + +V E SL LH+ + + LR
Sbjct: 73 SLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLR---QIV 127
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP---EEKRGLAG---YV 227
G +YLH+ +IH +K N+ LNE ++ D+GL+ E K+ L G Y+
Sbjct: 128 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI 184
Query: 228 DDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287
+ +KG + E DV+ G ++ +L G+ E +K IK+ +S
Sbjct: 185 APEVLSKKG---HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS------ 235
Query: 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQV 321
IP I P+ A + + RP+I ++
Sbjct: 236 --IPKHINPVA--ASLIQKMLQTDPTARPTINEL 265
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
+H+ +G+G G V+ TG AVK++ RL + F ++ L+ P I
Sbjct: 74 MTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKV--RLEV----FRVEELVACAGLSS-PRI 126
Query: 122 VPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ 181
VP+ G + I E + SL + + L +R L A GLEYLH
Sbjct: 127 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLH- 181
Query: 182 GVAPNIIHGCIKASNILLNEKFC-ARVCDYG 211
I+HG +KA N+LL+ A +CD+G
Sbjct: 182 --TRRILHGDVKADNVLLSSDGSRAALCDFG 210
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 41/191 (21%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ + + +L YL N + +
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG 222
+ ARG+EYL + IH + A N+L+ E ++ D+GL+ R
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA-------RD 206
Query: 223 LAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ DY+ + G T +SDV+ FGV++ EI + G G+
Sbjct: 207 INNI---DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
Query: 267 LVKWALPLIKE 277
V+ L+KE
Sbjct: 264 PVEELFKLLKE 274
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 62 GFSHRRIIGQGRLGTVYAA-LLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
++ ++IG G G VY A L +G+LVA+K+ VL + F ++ + H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQDKRFKNRE-LQIMRKLDHCN 108
Query: 121 IVPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR 174
IV + F + GE+ +V +++ H + +L +L + R
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFR 167
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
L Y+H I H IK N+LL+ + ++CD+G + + ++ Y
Sbjct: 168 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 224
Query: 234 EK---GGGNATRESDVYGFGVVLLEILSGR 260
+ G + T DV+ G VL E+L G+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 46/214 (21%)
Query: 67 RIIGQGRLGTVYAALLST----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
R IG+G+ G V+ + + VA+K + F T+ HP+IV
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 123 PILG-FSQAPGERIIVSEFINMASLDFYLHENN---DGASLLDWNRRLRIATGAARGLEY 178
++G ++ P I+ E + L +L D ASL+ + +L A +
Sbjct: 75 KLIGVITENPV--WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG 238
+H+ +A A N+L++ C ++ D+GLS Y++D + G
Sbjct: 133 VHRDIA---------ARNVLVSSNDCVKLGDFGLS-----------RYMEDSTXXKASKG 172
Query: 239 NA---------------TRESDVYGFGVVLLEIL 257
T SDV+ FGV + EIL
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 27/211 (12%)
Query: 114 SLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
SLA H ++V GF + +V E SL LH+ + + LR
Sbjct: 71 SLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLR---QIV 125
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP---EEKRGLAG---YV 227
G +YLH+ +IH +K N+ LNE ++ D+GL+ E K+ L G Y+
Sbjct: 126 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 182
Query: 228 DDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287
+ +KG + E DV+ G ++ +L G+ E +K IK+ +S
Sbjct: 183 APEVLSKKG---HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS------ 233
Query: 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSI 318
IP I P+ A + + RP+I
Sbjct: 234 --IPKHINPVA--ASLIQKMLQTDPTARPTI 260
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 33/208 (15%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ IG+G V A + TG+ VA+K I + + ++ + + HPNIV +
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRLRIATGAAR------GL 176
E I + + E G + D+ + R++ ++ +
Sbjct: 78 -------------EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV 124
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--FLAPEEKRGLAG---YVDDDY 231
+Y HQ I+H +KA N+LL+ ++ D+G S F + G Y +
Sbjct: 125 QYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPEL 181
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
+ +G E DV+ GV+L ++SG
Sbjct: 182 F--QGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 28/161 (17%)
Query: 69 IGQGRLGTVYAA--LLSTGKLVAVKRIHPRLVLSNAGFGFAS-----VIKTLSLAQHPNI 121
IG+G G V+ A L + G+ VA+KR+ R+ G ++ V++ L +HPN+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 122 VPILGFSQAPGERIIVSEFINMASLDF-YLHENNDGASLLDWNRRLRIATGAA------- 173
V + VS L + H + D + LD + T
Sbjct: 77 VRLFDVC-------TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 174 -RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
RGL++LH + ++H +K NIL+ ++ D+GL+
Sbjct: 130 LRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 28/161 (17%)
Query: 69 IGQGRLGTVYAA--LLSTGKLVAVKRIHPRLVLSNAGFGFAS-----VIKTLSLAQHPNI 121
IG+G G V+ A L + G+ VA+KR+ R+ G ++ V++ L +HPN+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 122 VPILGFSQAPGERIIVSEFINMASLDF-YLHENNDGASLLDWNRRLRIATGAA------- 173
V + VS L + H + D + LD + T
Sbjct: 77 VRLFDVC-------TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 174 -RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
RGL++LH + ++H +K NIL+ ++ D+GL+
Sbjct: 130 LRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 15/203 (7%)
Query: 63 FSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
F+ IG+G G V+ + + T K+VA+K I + I LS P +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 122 VPILGFSQAPGERIIVSEFINMAS-LDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
G + I+ E++ S LD LD + I +GL+YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLH 141
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK---GG 237
+ IH IKA+N+LL+E ++ D+G++ + + +V +W
Sbjct: 142 ---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 238 GNATRESDVYGFGVVLLEILSGR 260
++D++ G+ +E+ G
Sbjct: 199 SAYDSKADIWSLGITAIELARGE 221
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 114 SLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
SLA H ++V GF + +V E SL LH+ + + LR
Sbjct: 95 SLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLR---QIV 149
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP---EEKRGLAG---YV 227
G +YLH+ +IH +K N+ LNE ++ D+GL+ E K+ L G Y+
Sbjct: 150 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 206
Query: 228 DDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287
+ +KG + E DV+ G ++ +L G+ E +K IK+ +S
Sbjct: 207 APEVLSKKG---HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS------ 257
Query: 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQV 321
IP I P+ A + + RP+I ++
Sbjct: 258 --IPKHINPVA--ASLIQKMLQTDPTARPTINEL 287
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 15/203 (7%)
Query: 63 FSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
F+ IG+G G V+ + + T K+VA+K I + I LS P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 122 VPILGFSQAPGERIIVSEFINMAS-LDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
G + I+ E++ S LD LD + I +GL+YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLH 121
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK---GG 237
+ IH IKA+N+LL+E ++ D+G++ + + +V +W
Sbjct: 122 ---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 238 GNATRESDVYGFGVVLLEILSGR 260
++D++ G+ +E+ G
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 114 SLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAA 173
SLA H ++V GF + +V E SL LH+ + + LR
Sbjct: 97 SLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLR---QIV 151
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP---EEKRGLAG---YV 227
G +YLH+ +IH +K N+ LNE ++ D+GL+ E K+ L G Y+
Sbjct: 152 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 208
Query: 228 DDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287
+ +KG + E DV+ G ++ +L G+ E +K IK+ +S
Sbjct: 209 APEVLSKKG---HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS------ 259
Query: 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQV 321
IP I P+ A + + RP+I ++
Sbjct: 260 --IPKHINPVA--ASLIQKMLQTDPTARPTINEL 289
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 28/161 (17%)
Query: 69 IGQGRLGTVYAA--LLSTGKLVAVKRIHPRLVLSNAGFGFAS-----VIKTLSLAQHPNI 121
IG+G G V+ A L + G+ VA+KR+ R+ G ++ V++ L +HPN+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 122 VPILGFSQAPGERIIVSEFINMASLDF-YLHENNDGASLLDWNRRLRIATGAA------- 173
V + VS L + H + D + LD + T
Sbjct: 77 VRLFDVC-------TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 174 -RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
RGL++LH + ++H +K NIL+ ++ D+GL+
Sbjct: 130 LRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 15/203 (7%)
Query: 63 FSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
F+ IG+G G V+ + + T K+VA+K I + I LS P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 122 VPILGFSQAPGERIIVSEFINMAS-LDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
G + I+ E++ S LD LD + I +GL+YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLH 121
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK---GG 237
+ IH IKA+N+LL+E ++ D+G++ + + +V +W
Sbjct: 122 ---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 238 GNATRESDVYGFGVVLLEILSGR 260
++D++ G+ +E+ G
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 15/203 (7%)
Query: 63 FSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
F+ IG+G G V+ + + T K+VA+K I + I LS P +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 122 VPILGFSQAPGERIIVSEFINMAS-LDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH 180
G + I+ E++ S LD LD + I +GL+YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLH 136
Query: 181 QGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK---GG 237
+ IH IKA+N+LL+E ++ D+G++ + + +V +W
Sbjct: 137 ---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 238 GNATRESDVYGFGVVLLEILSGR 260
++D++ G+ +E+ G
Sbjct: 194 SAYDSKADIWSLGITAIELARGE 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 41/191 (21%)
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHE------------NNDGASLLDW 162
+ +H NI+ +LG G ++ + + +L YL N + +
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 163 NRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG 222
+ ARG+EYL + IH + A N+L+ E ++ D+GL+ R
Sbjct: 157 KDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA-------RD 206
Query: 223 LAGYVDDDYWHEKGGGN---------------ATRESDVYGFGVVLLEILS-GRRCEEGL 266
+ DY+ + G T +SDV+ FGV++ EI + G G+
Sbjct: 207 INNI---DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
Query: 267 LVKWALPLIKE 277
V+ L+KE
Sbjct: 264 PVEELFKLLKE 274
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 63 FSHRRIIGQGRLGTVYAAL----LSTGKLVAVKRIHPRLVLSNAGFGFASVIK--TLSLA 116
F R++G+G G V+ +TGK+ A+K + +++ NA + + L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HP IV ++ Q G+ ++ E+++ L ++ +G + D A G
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALG- 135
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212
+LHQ II+ +K NI+LN + ++ D+GL
Sbjct: 136 -HLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 63 FSHRRIIGQGRLGTVYAAL----LSTGKLVAVKRIHPRLVLSNAGFGFASVIK--TLSLA 116
F R++G+G G V+ +TGK+ A+K + +++ NA + + L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176
+HP IV ++ Q G+ ++ E+++ L ++ +G + D A G
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALG- 135
Query: 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212
+LHQ II+ +K NI+LN + ++ D+GL
Sbjct: 136 -HLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 99/254 (38%), Gaps = 31/254 (12%)
Query: 52 PLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLV-AVKRIHPRLVLSNAGFGFASVI 110
P + A F ++IG+G G V A ++ AVK + + +L
Sbjct: 29 PSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSE 88
Query: 111 KTLSL--AQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRI 168
+ + L +HP +V + Q + V ++IN L ++L L+ R
Sbjct: 89 RNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER---CFLEPRARF-Y 144
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR------G 222
A A L YLH + NI++ +K NILL+ + + D+GL E G
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCG 201
Query: 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSE 282
Y+ + H++ R D + G VL E+L G LP +E
Sbjct: 202 TPEYLAPEVLHKQP---YDRTVDWWCLGAVLYEMLYG------------LPPFYSRNTAE 246
Query: 283 LLDPRLAIPCEIKP 296
+ D L P ++KP
Sbjct: 247 MYDNILNKPLQLKP 260
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 19/151 (12%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHPNIVPILG 126
IG+G G VY A + G+ A+K+I RL + G ++ I L +H NIV +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVA-- 184
++V E H + D LLD + A L L G+A
Sbjct: 68 VIHTKKRLVLVFE-----------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 185 --PNIIHGCIKASNILLNEKFCARVCDYGLS 213
++H +K N+L+N + ++ D+GL+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 19/151 (12%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHPNIVPILG 126
IG+G G VY A + G+ A+K+I RL + G ++ I L +H NIV +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVA-- 184
++V E H + D LLD + A L L G+A
Sbjct: 68 VIHTKKRLVLVFE-----------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 185 --PNIIHGCIKASNILLNEKFCARVCDYGLS 213
++H +K N+L+N + ++ D+GL+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 19/151 (12%)
Query: 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHPNIVPILG 126
IG+G G VY A + G+ A+K+I RL + G ++ I L +H NIV +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVA-- 184
++V E H + D LLD + A L L G+A
Sbjct: 68 VIHTKKRLVLVFE-----------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 185 --PNIIHGCIKASNILLNEKFCARVCDYGLS 213
++H +K N+L+N + ++ D+GL+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA 116
+++ F +G G TVY L +TG VA+K + L + ++ I+ +SL
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK----LDSEEGTPSTAIREISLM 57
Query: 117 Q---HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASL--LDWNRRLRIATG 171
+ H NIV + + +V EF++ L Y+ G + L+ N
Sbjct: 58 KELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 172 AARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+GL + H+ I+H +K N+L+N++ ++ D+GL+
Sbjct: 117 LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLA 155
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHPNIVPIL 125
IG+G GTV+ A T ++VA+KR+ RL + G +++ I L +H NIV +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV--RLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
+ + +V EF + ++ N D LD +GL + H +
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGD----LDPEIVKSFLFQLLKGLGFCH---SR 120
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
N++H +K N+L+N ++ D+GL+
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 10/202 (4%)
Query: 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--GFASVIKTLSLAQH 118
D F R +G+G+ G VY A + ++ + + G I+ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEY 178
PNI+ + + ++ E+ L ++ + D R I A L Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKSCTFDEQRTATIMEELADALMY 138
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRG-LAGYVDDDYWHEKGG 237
H +IH IK N+LL K ++ D+G S AP +R + G +D G
Sbjct: 139 CH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 238 GNATRESDVYGFGVVLLEILSG 259
+ D++ GV+ E+L G
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVG 217
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 86/218 (39%), Gaps = 14/218 (6%)
Query: 46 LCAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFG 105
L FA + +D + F+ IG+G G VY + + K V +I +
Sbjct: 5 LRGFANQHSRVDPE-ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIED 63
Query: 106 FASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMAS-LDFYLHENNDGASLLDWNR 164
I LS P I G + I+ E++ S LD L+
Sbjct: 64 IQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL------KPGPLEETY 117
Query: 165 RLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLA 224
I +GL+YLH + IH IKA+N+LL+E+ ++ D+G++ + +
Sbjct: 118 IATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 174
Query: 225 GYVDDDYWHEK---GGGNATRESDVYGFGVVLLEILSG 259
+V +W ++D++ G+ +E+ G
Sbjct: 175 XFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 81/210 (38%), Gaps = 38/210 (18%)
Query: 68 IIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
++G+G G V T + AVK I+ + ++ L HPNI+ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRL------RIATGAARGLE 177
+ IV E G L D +R RI G+
Sbjct: 89 ILEDSSSFYIVGELYT-------------GGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 178 YLHQGVAPNIIHGCIKASNILL--NEKFCA-RVCDYGLSFLAPEEKR-----GLAGYVDD 229
Y+H+ NI+H +K NILL EK C ++ D+GLS + + G A Y+
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 230 DYWHEKGGGNATRESDVYGFGVVLLEILSG 259
+ G + DV+ GV+L +LSG
Sbjct: 193 EVLR----GTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 81/210 (38%), Gaps = 38/210 (18%)
Query: 68 IIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
++G+G G V T + AVK I+ + ++ L HPNI+ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRL------RIATGAARGLE 177
+ IV E G L D +R RI G+
Sbjct: 89 ILEDSSSFYIVGELYT-------------GGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 178 YLHQGVAPNIIHGCIKASNILL--NEKFCA-RVCDYGLSFLAPEEKR-----GLAGYVDD 229
Y+H+ NI+H +K NILL EK C ++ D+GLS + + G A Y+
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 230 DYWHEKGGGNATRESDVYGFGVVLLEILSG 259
+ G + DV+ GV+L +LSG
Sbjct: 193 EVLR----GTYDEKCDVWSAGVILYILLSG 218
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 74/203 (36%), Gaps = 29/203 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
+G G G VY A T L A K I + + I L+ HPNIV +L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLR------IATGAARGLEYLHQ 181
I+ EF ++D A +L+ R L + L YLH
Sbjct: 103 FYYENNLWILIEFCAGGAVD---------AVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--------H 233
IIH +KA NIL ++ D+G+S + ++ YW
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 234 EKGGGNATRESDVYGFGVVLLEI 256
++DV+ G+ L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 74/203 (36%), Gaps = 29/203 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
+G G G VY A T L A K I + + I L+ HPNIV +L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLR------IATGAARGLEYLHQ 181
I+ EF ++D A +L+ R L + L YLH
Sbjct: 103 FYYENNLWILIEFCAGGAVD---------AVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--------H 233
IIH +KA NIL ++ D+G+S + ++ YW
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 234 EKGGGNATRESDVYGFGVVLLEI 256
++DV+ G+ L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 88/232 (37%), Gaps = 53/232 (22%)
Query: 67 RIIGQGRLGTVYAALLSTGK------LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ +G+G G V A K VAVK + S S L HP+
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELR-DLLSEFNVLKQVNHPH 87
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHE--------------------NNDGASLL 160
++ + G G +++ E+ SL +L E ++ L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 161 DWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219
+ A ++G++YL + +++H + A NIL+ E ++ D+GLS EE
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 220 ---KR----------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS 258
KR + D Y T +SDV+ FGV+L EI++
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIY---------TTQSDVWSFGVLLWEIVT 247
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 81/210 (38%), Gaps = 38/210 (18%)
Query: 68 IIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
++G+G G V T + AVK I+ + ++ L HPNI+ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDW---NRRL------RIATGAARGLE 177
+ IV E G L D +R RI G+
Sbjct: 89 ILEDSSSFYIVGELYT-------------GGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 178 YLHQGVAPNIIHGCIKASNILL--NEKFCA-RVCDYGLSFLAPEEKR-----GLAGYVDD 229
Y+H+ NI+H +K NILL EK C ++ D+GLS + + G A Y+
Sbjct: 136 YMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
Query: 230 DYWHEKGGGNATRESDVYGFGVVLLEILSG 259
+ G + DV+ GV+L +LSG
Sbjct: 193 EVLR----GTYDEKCDVWSAGVILYILLSG 218
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 87/232 (37%), Gaps = 53/232 (22%)
Query: 67 RIIGQGRLGTVYAALLSTGK------LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ +G+G G V A K VAVK + S S L HP+
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELR-DLLSEFNVLKQVNHPH 87
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHE--------------------NNDGASLL 160
++ + G G +++ E+ SL +L E ++ L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 161 DWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219
+ A ++G++YL + ++H + A NIL+ E ++ D+GLS EE
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 220 ---KR----------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS 258
KR + D Y T +SDV+ FGV+L EI++
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIY---------TTQSDVWSFGVLLWEIVT 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 87/232 (37%), Gaps = 53/232 (22%)
Query: 67 RIIGQGRLGTVYAALLSTGK------LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ +G+G G V A K VAVK + S S L HP+
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELR-DLLSEFNVLKQVNHPH 87
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHE--------------------NNDGASLL 160
++ + G G +++ E+ SL +L E ++ L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 161 DWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219
+ A ++G++YL + ++H + A NIL+ E ++ D+GLS EE
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 220 ---KR----------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS 258
KR + D Y T +SDV+ FGV+L EI++
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIY---------TTQSDVWSFGVLLWEIVT 247
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 29/211 (13%)
Query: 69 IGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
+G G G V +A+ TG VA+K+++ ++ L +H N++ +L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASL--------LDWNRRLRIATGAARGLEYL 179
P E + +F DFYL G L L +R + +GL Y+
Sbjct: 93 F-TPDE--TLDDFT-----DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 144
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK---- 235
H A IIH +K N+ +NE ++ D+GL+ A E G W+
Sbjct: 145 H---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAPEVI 197
Query: 236 -GGGNATRESDVYGFGVVLLEILSGRRCEEG 265
T+ D++ G ++ E+++G+ +G
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 17/204 (8%)
Query: 68 IIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA---QHPNIVP 123
+IG+G V + TG+ AVK + S+ G + + S+ +HP+IV
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+L + G +V EF++ A L F + + D + L Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 149
Query: 184 APNIIHGCIKASNILLNEKFCA---RVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA 240
NIIH +K +LL K + ++ +G++ E G V H
Sbjct: 150 --NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP--HFMAPEVV 205
Query: 241 TRES-----DVYGFGVVLLEILSG 259
RE DV+G GV+L +LSG
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSG 229
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 74/203 (36%), Gaps = 29/203 (14%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
+G G G VY A T L A K I + + I L+ HPNIV +L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLR------IATGAARGLEYLHQ 181
I+ EF ++D A +L+ R L + L YLH
Sbjct: 103 FYYENNLWILIEFCAGGAVD---------AVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW--------H 233
IIH +KA NIL ++ D+G+S + ++ YW
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 234 EKGGGNATRESDVYGFGVVLLEI 256
++DV+ G+ L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 29/169 (17%)
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS---FLAPEEKRGLAGYVDD 229
ARG+E+L + IH + A NILL+E ++CD+GL+ + P+ R +
Sbjct: 209 ARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPL 265
Query: 230 DYWHEKGGGNA--TRESDVYGFGVVLLEILS-------GRRCEEGLLVKWALPLIKEMRF 280
+ + + + +SDV+ +GV+L EI S G + +E + L + MR
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSR----LREGMR- 320
Query: 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329
+ P + P + ++ L C K RP ++ L +L+
Sbjct: 321 --MRAPEYSTP-------EIYQIMLDCWHRDPKERPRFAELVEKLGDLL 360
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 17/204 (8%)
Query: 68 IIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA---QHPNIVP 123
+IG+G V + TG+ AVK + S+ G + + S+ +HP+IV
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+L + G +V EF++ A L F + + D + L Y H
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 151
Query: 184 APNIIHGCIKASNILLNEKFCA---RVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA 240
NIIH +K +LL K + ++ +G++ E G V H
Sbjct: 152 --NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP--HFMAPEVV 207
Query: 241 TRES-----DVYGFGVVLLEILSG 259
RE DV+G GV+L +LSG
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSG 231
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 61 DGFSHRRIIGQGRLGTVYAALL----STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA 116
+ F +++G G G V+ TGKL A+K + ++ A + + L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 117 ---QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGA- 172
Q P +V + Q + ++ ++IN L +L + ++I G
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE-----HEVQIYVGEI 168
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--FLAPEEKR-----GLAG 225
LE+LH+ II+ IK NILL+ + D+GLS F+A E +R G
Sbjct: 169 VLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE 225
Query: 226 YVDDDYWHEKGGGNATRES-DVYGFGVVLLEILSG 259
Y+ D +GG + ++ D + GV++ E+L+G
Sbjct: 226 YMAPDIV--RGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 13/163 (7%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASV-----IKT 112
AT + IG G GTVY A +G VA+K + R+ G ++V ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRR 59
Query: 113 LSLAQHPNIVPILGF--SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIAT 170
L +HPN+V ++ + I V+ D + + L +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 171 GAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
RGL++LH I+H +K NIL+ ++ D+GL+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 13/163 (7%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASV-----IKT 112
AT + IG G GTVY A +G VA+K + R+ G ++V ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRR 59
Query: 113 LSLAQHPNIVPILGF--SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIAT 170
L +HPN+V ++ + I V+ D + + L +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 171 GAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
RGL++LH I+H +K NIL+ ++ D+GL+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 62 GFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
+++ ++IG G G V+ A L VA+K+ VL + F ++ + + +HPN+
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKK-----VLQDKRFKNRE-LQIMRIVKHPNV 94
Query: 122 VPILGFSQAPGERI------IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARG 175
V + F + G++ +V E++ H ++ +L + R
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ-LLRS 153
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKF-CARVCDYGLSFLAPEEKRGLAGYVDDDYWHE 234
L Y+H + I H IK N+LL+ ++ D+G + + + ++ Y
Sbjct: 154 LAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAP 210
Query: 235 K---GGGNATRESDVYGFGVVLLEILSGR 260
+ G N T D++ G V+ E++ G+
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 117 QHPNIVPILGF--SQAPGERII-------VSEFINMASLDFYLHENNDG---ASLLDWNR 164
QHPN+V +LG P I + EF+ M S + +D S L+
Sbjct: 87 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 146
Query: 165 RLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL--SFLAPEEKRG 222
+ + A G+EYL + +++H + N+L+ +K ++ D GL A + +
Sbjct: 147 FVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 203
Query: 223 LAGYVDDDYWHEKGG---GNATRESDVYGFGVVLLEILS 258
L + W G + +SD++ +GVVL E+ S
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 13/163 (7%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASV-----IKT 112
AT + IG G GTVY A +G VA+K + R+ G ++V ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRR 59
Query: 113 LSLAQHPNIVPILGF--SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIAT 170
L +HPN+V ++ + I V+ D + + L +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 171 GAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
RGL++LH I+H +K NIL+ ++ D+GL+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 117 QHPNIVPILGF--SQAPGERII-------VSEFINMASLDFYLHENNDG---ASLLDWNR 164
QHPN+V +LG P I + EF+ M S + +D S L+
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 165 RLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL--SFLAPEEKRG 222
+ + A G+EYL + +++H + N+L+ +K ++ D GL A + +
Sbjct: 130 FVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 186
Query: 223 LAGYVDDDYWHEKGG---GNATRESDVYGFGVVLLEILS 258
L + W G + +SD++ +GVVL E+ S
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
+GL+YLH + IH IKA+N+LL+E+ ++ D+G++ + + +V +W
Sbjct: 131 KGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 187
Query: 234 EK---GGGNATRESDVYGFGVVLLEILSGR 260
++D++ G+ +E+ G
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V +A+ +G+ VA+K++ P A + ++ L QH N++ +L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL-LLKHMQHENVIGLLD 108
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
F+ A R ++ M + L + G + + + +GL+Y+H +
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIM-GMEFSE-EKIQYLVYQMLKGLKYIH---SA 163
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK----GGGNAT 241
++H +K N+ +NE ++ D+GL+ A E + GYV ++ +
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYN 220
Query: 242 RESDVYGFGVVLLEILSGRRCEEG 265
+ D++ G ++ E+L+G+ +G
Sbjct: 221 QTVDIWSVGCIMAEMLTGKTLFKG 244
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+G G G+V +A+ +G+ VA+K++ P A + ++ L QH N++ +L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL-LLKHMQHENVIGLLD 90
Query: 127 -FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
F+ A R ++ M + L + G + + + +GL+Y+H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIM-GLKFSE-EKIQYLVYQMLKGLKYIHSA--- 145
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK----GGGNAT 241
++H +K N+ +NE ++ D+GL+ A E + GYV ++ +
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYN 202
Query: 242 RESDVYGFGVVLLEILSGRRCEEG 265
+ D++ G ++ E+L+G+ +G
Sbjct: 203 QTVDIWSVGCIMAEMLTGKTLFKG 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASV--IKTLSLAQHPNIVPIL 125
IG+G GTV+ A T ++VA+KR+ RL + G +++ I L +H NIV +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV--RLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
+ + +V EF + ++ N D LD +GL + H +
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGD----LDPEIVKSFLFQLLKGLGFCH---SR 120
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
N++H +K N+L+N ++ ++GL+
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 36/217 (16%)
Query: 63 FSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI 121
F +IG G G V+ A GK +KR+ +N +K L+ H NI
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK----YNNEKA--EREVKALAKLDHVNI 66
Query: 122 VPI----LGFSQAPGER------------IIVSEFINMASLDFYLHENNDGASLLDWNRR 165
V GF P I EF + +L+ ++ + LD
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLA 124
Query: 166 LRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL-SFLAPEEKR--- 221
L + +G++Y+H + +I+ +K SNI L + ++ D+GL + L + KR
Sbjct: 125 LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS 181
Query: 222 -GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL 257
G Y+ + + G +E D+Y G++L E+L
Sbjct: 182 KGTLRYMSPEQISSQDYG---KEVDLYALGLILAELL 215
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHE 234
G++YL + N +H + A N+LL + A++ D+GLS + L DD Y+
Sbjct: 448 GMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLS-------KALGA--DDSYYTA 495
Query: 235 KGGGNA---------------TRESDVYGFGVVLLEILS 258
+ G + SDV+ +GV + E LS
Sbjct: 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHE 234
G++YL + N +H + A N+LL + A++ D+GLS + L DD Y+
Sbjct: 122 GMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLS-------KALGA--DDSYYTA 169
Query: 235 KGGGNA---------------TRESDVYGFGVVLLEILS 258
+ G + SDV+ +GV + E LS
Sbjct: 170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 20/198 (10%)
Query: 69 IGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G V A +G+ VAVK + R F V+ + QH N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLR-KQQRRELLFNEVV-IMRDYQHFNVVEMYKS 110
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIAT---GAARGLEYLHQGVA 184
E ++ EF+ +L D S + N +IAT + L YLH A
Sbjct: 111 YLVGEELWVLMEFLQGGAL-------TDIVSQVRLNEE-QIATVCEAVLQALAYLH---A 159
Query: 185 PNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEK---GGGNAT 241
+IH IK+ +ILL ++ D+G ++ V YW
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYA 219
Query: 242 RESDVYGFGVVLLEILSG 259
E D++ G++++E++ G
Sbjct: 220 TEVDIWSLGIMVIEMVDG 237
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 41/261 (15%)
Query: 60 TDGFSHRRIIGQGRLGTVYAALLSTGKLV----AVKRIHPRLVLSNAGFG-FASVIKTLS 114
+D + + +G G G V LL KL A+K I V + + G + L
Sbjct: 20 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASL--DFYLHENN---DGASLLDWNRRLRIA 169
HPNI+ + F + +V E L + L + D A ++
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM--------- 127
Query: 170 TGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF---CARVCDYGLSFL-----APEEKR 221
G YLH+ NI+H +K N+LL K ++ D+GLS +E+
Sbjct: 128 KQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL 184
Query: 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFS 281
G A Y+ + +K + DV+ GV+L +L G G + L +++ +FS
Sbjct: 185 GTAYYIAPEVLRKK----YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS 240
Query: 282 ELLDP--RLAIPCEIKPLVRL 300
DP + E K LV+L
Sbjct: 241 --FDPPDWTQVSDEAKQLVKL 259
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIH-PRLVLSNAGFGFASV-----IK 111
AT + IG G GTVY A +G VA+K + P G ++V ++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 112 TLSLAQHPNIVPILGF--SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIA 169
L +HPN+V ++ + I V+ D + + L +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 170 TGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
RGL++LH I+H +K NIL+ ++ D+GL+
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 167
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARV--CDYGLSF----------LAPEEKRGL 223
LEY+H+ +HG IKASN+LLN K +V DYGL++ A + KR
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCH 221
Query: 224 AGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
G ++ G +R D+ G +++ L+G
Sbjct: 222 DGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTG 257
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 7/181 (3%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG--FSQAPGERIIVSEF 140
S GK++ K + + S + L +HPNIV + IV E+
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV--APNIIHGCIKASNIL 198
L + + LD LR+ T L+ H+ ++H +K +N+
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 199 LNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA---TRESDVYGFGVVLLE 255
L+ K ++ D+GL+ + + +V Y+ N +SD++ G +L E
Sbjct: 149 LDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 256 I 256
+
Sbjct: 209 L 209
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 28/197 (14%)
Query: 82 LSTGKLVAVKRIHPRLVLSNAGFGFASV------------IKTLSLAQHPNIVPILGFSQ 129
L TG V R+ R +N F I+T+S+ +HP +V + +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 130 APGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIH 189
E +++ EF++ L + D + + + + +GL ++H+ N +H
Sbjct: 225 DDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVH 278
Query: 190 GCIKASNILLNEKFCA--RVCDYGLS-FLAPEEK----RGLAGYVDDDYWHEKGGGNATR 242
+K NI+ K ++ D+GL+ L P++ G A + + K G T
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT- 337
Query: 243 ESDVYGFGVVLLEILSG 259
D++ GV+ +LSG
Sbjct: 338 --DMWSVGVLSYILLSG 352
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 22/160 (13%)
Query: 108 SVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLR 167
S++K+L HPNI+ + + +V+EF L E D
Sbjct: 98 SLLKSLD---HPNIIKLFDVFEDKKYFYLVTEFYEGGEL----FEQIINRHKFDECDAAN 150
Query: 168 IATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK---FCARVCDYGL-SFLAPE----E 219
I G+ YLH+ NI+H IK NILL K ++ D+GL SF + + +
Sbjct: 151 IMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 220 KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
+ G A Y+ + +K + DV+ GV++ +L G
Sbjct: 208 RLGTAYYIAPEVLKKK----YNEKCDVWSCGVIMYILLCG 243
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 167 RIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL-----APEEKR 221
++ + L YL + +IH +K SNILL+E+ ++CD+G+S A +
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 222 GLAGYVDDDYWHEKGGGNATRE--SDVYGFGVVLLEILSGR 260
G A Y+ + + +DV+ G+ L+E+ +G+
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKA 194
I EF + +L+ ++ + LD L + +G++Y+H + +IH +K
Sbjct: 110 FIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKP 164
Query: 195 SNILLNEKFCARVCDYGL-SFLAPEEKR----GLAGYVDDDYWHEKGGGNATRESDVYGF 249
SNI L + ++ D+GL + L + KR G Y+ + + G +E D+Y
Sbjct: 165 SNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYG---KEVDLYAL 221
Query: 250 GVVLLEIL 257
G++L E+L
Sbjct: 222 GLILAELL 229
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKVVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH--EK 235
+LH IIH +K SNI++ ++ D+GL+ A + YV Y+ E
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEV 196
Query: 236 GGGNATRES-DVYGFGVVLLEILSG 259
G +E+ D++ GV++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 71/181 (39%), Gaps = 7/181 (3%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG--FSQAPGERIIVSEF 140
S GK++ K + + S + L +HPNIV + IV E+
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV--APNIIHGCIKASNIL 198
L + + LD LR+ T L+ H+ ++H +K +N+
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 199 LNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA---TRESDVYGFGVVLLE 255
L+ K ++ D+GL+ + ++ +V Y+ N +SD++ G +L E
Sbjct: 149 LDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 256 I 256
+
Sbjct: 209 L 209
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 28/197 (14%)
Query: 82 LSTGKLVAVKRIHPRLVLSNAGFGFASV------------IKTLSLAQHPNIVPILGFSQ 129
L TG V R+ R +N F I+T+S+ +HP +V + +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 130 APGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIH 189
E +++ EF++ L + D + + + + +GL ++H+ N +H
Sbjct: 119 DDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVH 172
Query: 190 GCIKASNILLNEKFCA--RVCDYGLS-FLAPEEK----RGLAGYVDDDYWHEKGGGNATR 242
+K NI+ K ++ D+GL+ L P++ G A + + K G T
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT- 231
Query: 243 ESDVYGFGVVLLEILSG 259
D++ GV+ +LSG
Sbjct: 232 --DMWSVGVLSYILLSG 246
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 104/258 (40%), Gaps = 35/258 (13%)
Query: 60 TDGFSHRRIIGQGRLGTVYAALLSTGKLV----AVKRIHPRLVLSNAGFG-FASVIKTLS 114
+D + + +G G G V LL KL A+K I V + + G + L
Sbjct: 3 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 59
Query: 115 LAQHPNIVPILGFSQAPGERIIVSEFINMASL--DFYLHENNDGASLLDWNRRLRIATGA 172
HPNI+ + F + +V E L + L + S +D I
Sbjct: 60 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVD---AAVIMKQV 113
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNILLNEKF---CARVCDYGLSFL-----APEEKRGLA 224
G YLH+ NI+H +K N+LL K ++ D+GLS +E+ G A
Sbjct: 114 LSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 170
Query: 225 GYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELL 284
Y+ + +K + DV+ GV+L +L G G + L +++ +FS
Sbjct: 171 YYIAPEVLRKK----YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS--F 224
Query: 285 DP--RLAIPCEIKPLVRL 300
DP + E K LV+L
Sbjct: 225 DPPDWTQVSDEAKQLVKL 242
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 78/209 (37%), Gaps = 35/209 (16%)
Query: 67 RIIGQ-GRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPI 124
IIG+ G G VY A T L A K I + + I L+ HPNIV +
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKL 72
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLR------IATGAARGLEY 178
L I+ EF ++D A +L+ R L + L Y
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVD---------AVMLELERPLTESQIQVVCKQTLDALNY 123
Query: 179 LHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLA---GYVDDDYW--- 232
LH IIH +KA NIL ++ D+G+S A + + ++ YW
Sbjct: 124 LHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRTXIQRRDSFIGTPYWMAP 178
Query: 233 -----HEKGGGNATRESDVYGFGVVLLEI 256
++DV+ G+ L+E+
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 7/181 (3%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG--FSQAPGERIIVSEF 140
S GK++ K + + S + L +HPNIV + IV E+
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV--APNIIHGCIKASNIL 198
L + + LD LR+ T L+ H+ ++H +K +N+
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 199 LNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNA---TRESDVYGFGVVLLE 255
L+ K ++ D+GL+ + + +V Y+ N +SD++ G +L E
Sbjct: 149 LDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 256 I 256
+
Sbjct: 209 L 209
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + + H
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKVVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH--EK 235
+LH IIH +K SNI++ ++ D+GL+ A + YV Y+ E
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEV 196
Query: 236 GGGNATRES-DVYGFGVVLLEILSG 259
G +E+ D++ GV++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 68 IIGQG--RLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPI 124
+IG+G L TV A TG+ V V+RI+ + + L HPNIVP
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 75
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIA---TGAARGLEYLHQ 181
A E +V+ F+ S + +D L IA G + L+Y+H
Sbjct: 76 RATFIADNELWVVTSFMAYGSAKDLI-----CTHFMDGMNELAIAYILQGVLKALDYIHH 130
Query: 182 GVAPNIIHGCIKASNILLN 200
+H +KAS+IL++
Sbjct: 131 M---GYVHRSVKASHILIS 146
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 68 IIGQG--RLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPI 124
+IG+G L TV A TG+ V V+RI+ + + L HPNIVP
Sbjct: 32 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 125 LGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIA---TGAARGLEYLHQ 181
A E +V+ F+ S + +D L IA G + L+Y+H
Sbjct: 92 RATFIADNELWVVTSFMAYGSAKDLI-----CTHFMDGMNELAIAYILQGVLKALDYIHH 146
Query: 182 GVAPNIIHGCIKASNILLN 200
+H +KAS+IL++
Sbjct: 147 M---GYVHRSVKASHILIS 162
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 26/164 (15%)
Query: 61 DGFSHRRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
D + R ++G G V A T KLVA+K I + + G + I L +HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG-SMENEIAVLHKIKHP 76
Query: 120 NIVPILGFSQAPGERIIVSEFINMASL-------DFYLHENNDGASLLDWNRRLRIATGA 172
NIV + ++ G ++ + ++ L FY + R+
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----------RLIFQV 125
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNIL---LNEKFCARVCDYGLS 213
++YLH I+H +K N+L L+E + D+GLS
Sbjct: 126 LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 63 FSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQHPN 120
F+ ++G+G G V A T +L A+K + +V+ + V K L+L P
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 121 IVPILGFSQAPGERI-IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
+ L +R+ V E++N L +++ + + + A + GL +L
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISIGLFFL 136
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYG------LSFLAPEEKRGLAGYVDDDYWH 233
H+ II+ +K N++L+ + ++ D+G + + E G Y+ +
Sbjct: 137 HKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIA 193
Query: 234 EKGGGNATRESDVYGFGVVLLEILSGR 260
+ G + D + +GV+L E+L+G+
Sbjct: 194 YQPYGKSV---DWWAYGVLLYEMLAGQ 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 26/164 (15%)
Query: 61 DGFSHRRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
D + R ++G G V A T KLVA+K I + G + I L +HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG-SMENEIAVLHKIKHP 76
Query: 120 NIVPILGFSQAPGERIIVSEFINMASL-------DFYLHENNDGASLLDWNRRLRIATGA 172
NIV + ++ G ++ + ++ L FY + R+
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----------RLIFQV 125
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNIL---LNEKFCARVCDYGLS 213
++YLH I+H +K N+L L+E + D+GLS
Sbjct: 126 LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 34/215 (15%)
Query: 61 DGFSHRRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
D + R ++G G V A T KLVA+K I + G + I L +HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG-SMENEIAVLHKIKHP 76
Query: 120 NIVPILGFSQAPGERIIVSEFINMASL-------DFYLHENNDGASLLDWNRRLRIATGA 172
NIV + ++ G ++ + ++ L FY + R+
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----------RLIFQV 125
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNIL---LNEKFCARVCDYGLSFLAP-----EEKRGLA 224
++YLH I+H +K N+L L+E + D+GLS + G
Sbjct: 126 LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 225 GYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
GYV + +K A D + GV+ +L G
Sbjct: 183 GYVAPEVLAQKPYSKAV---DCWSIGVIAYILLCG 214
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 110 IKTLSLAQHPNIVPILGFSQAPGER--IIVSEFINMASLDFYLHENNDGASLLDWNRRLR 167
I L HPN+V ++ P E +V E +N + E L + R
Sbjct: 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----MEVPTLKPLSEDQARFY 142
Query: 168 IATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
+G+EYLH IIH IK SN+L+ E ++ D+G+S
Sbjct: 143 FQD-LIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARV--CDYGLSF----------LAPEEKRGL 223
LEY+H+ +HG IKA+N+LL K +V DYGLS+ ++G
Sbjct: 164 LEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGH 220
Query: 224 AGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR 260
G ++ G +R SDV G +L L G+
Sbjct: 221 NGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGK 257
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 34/215 (15%)
Query: 61 DGFSHRRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP 119
D + R ++G G V A T KLVA+K I + G + I L +HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG-SMENEIAVLHKIKHP 76
Query: 120 NIVPILGFSQAPGERIIVSEFINMASL-------DFYLHENNDGASLLDWNRRLRIATGA 172
NIV + ++ G ++ + ++ L FY + R+
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----------RLIFQV 125
Query: 173 ARGLEYLHQGVAPNIIHGCIKASNIL---LNEKFCARVCDYGLSFLAP-----EEKRGLA 224
++YLH I+H +K N+L L+E + D+GLS + G
Sbjct: 126 LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 225 GYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
GYV + +K A D + GV+ +L G
Sbjct: 183 GYVAPEVLAQKPYSKAV---DCWSIGVIAYILLCG 214
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 21/163 (12%)
Query: 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA-----GFGFASV-IKT 112
+ +S +G G G V+ A+ K V VK I VL + G ++ I
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 113 LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYL----HENNDGASLLDWNRRLRI 168
LS +H NI+ +L + G +V E + + LD + H D R+L
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVME-KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVS 141
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211
A G R +IIH IK NI++ E F ++ D+G
Sbjct: 142 AVGYLR---------LKDIIHRDIKDENIVIAEDFTIKLIDFG 175
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 36/210 (17%)
Query: 69 IGQGRLGTVYAALLS--TGKLV--AVKRIHPR-LVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G G G V +GK V AVK + P L A F + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ G P ++ V+E + SL L ++ G LL R A A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLL--GTLSRYAVQVAEGMGYLE--- 128
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW----HEK---- 235
+ IH + A N+LL + ++ D+GL P+ +DD++ H K
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---------NDDHYVMQEHRKVPFA 179
Query: 236 -------GGGNATRESDVYGFGVVLLEILS 258
+ SD + FGV L E+ +
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 85/211 (40%), Gaps = 38/211 (18%)
Query: 69 IGQGRLGTVYAALLS--TGKLV--AVKRIHPRLVLSN--AGFGFASVIKTLSLAQHPNIV 122
+G G G V +GK V AVK + P VLS A F + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPD-VLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQG 182
+ G P ++ V+E + SL L ++ G LL R A A G+ YL
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLL--GTLSRYAVQVAEGMGYLE-- 128
Query: 183 VAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW----HEK--- 235
+ IH + A N+LL + ++ D+GL P+ +DD++ H K
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---------NDDHYVMQEHRKVPF 178
Query: 236 --------GGGNATRESDVYGFGVVLLEILS 258
+ SD + FGV L E+ +
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 33/153 (21%)
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARV--CDYGLSF-LAPE---------EKRGL 223
LEY+H+ +HG IKASN+LLN K +V DYGL++ PE KR
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCH 221
Query: 224 AGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSEL 283
G ++ G +R D+ G +++ L+G + W L
Sbjct: 222 DGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH-------LPWE---------DNL 265
Query: 284 LDPRLAIPCEIKPLVRLAKVALACVGNSRKNRP 316
DP+ +I+ +A + C KN+P
Sbjct: 266 KDPKYVRDSKIRYRENIASLMDKCF--PEKNKP 296
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 33/153 (21%)
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARV--CDYGLSF-LAPE---------EKRGL 223
LEY+H+ +HG IKASN+LLN K +V DYGL++ PE KR
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCH 221
Query: 224 AGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSEL 283
G ++ G +R D+ G +++ L+G + W L
Sbjct: 222 DGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH-------LPWE---------DNL 265
Query: 284 LDPRLAIPCEIKPLVRLAKVALACVGNSRKNRP 316
DP+ +I+ +A + C KN+P
Sbjct: 266 KDPKYVRDSKIRYRENIASLMDKCF--PEKNKP 296
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 35/140 (25%)
Query: 136 IVSEFINMASLDFYLHENND---GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCI 192
+V++ + L ++ EN LL+W ++ A+G+ YL ++H +
Sbjct: 95 LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYLED---VRLVHRDL 145
Query: 193 KASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGG-------------- 238
A N+L+ ++ D+GL+ L +D+ +H GG
Sbjct: 146 AARNVLVKSPNHVKITDFGLARLLD---------IDETEYHADGGKVPIKWMALESILRR 196
Query: 239 NATRESDVYGFGVVLLEILS 258
T +SDV+ +GV + E+++
Sbjct: 197 RFTHQSDVWSYGVTVWELMT 216
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 36/210 (17%)
Query: 69 IGQGRLGTVYAALLS--TGKLV--AVKRIHPR-LVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G G G V +GK V AVK + P L A F + + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ G P ++ V+E + SL L ++ G LL R A A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLL--GTLSRYAVQVAEGMGYLE--- 132
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW----HEK---- 235
+ IH + A N+LL + ++ D+GL P+ +DD++ H K
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---------NDDHYVMQEHRKVPFA 183
Query: 236 -------GGGNATRESDVYGFGVVLLEILS 258
+ SD + FGV L E+ +
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 36/210 (17%)
Query: 69 IGQGRLGTVYAALLS--TGKLV--AVKRIHPR-LVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G G G V +GK V AVK + P L A F + + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ G P ++ V+E + SL L ++ G LL R A A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLL--GTLSRYAVQVAEGMGYLE--- 132
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW----HEK---- 235
+ IH + A N+LL + ++ D+GL P+ +DD++ H K
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---------NDDHYVMQEHRKVPFA 183
Query: 236 -------GGGNATRESDVYGFGVVLLEILS 258
+ SD + FGV L E+ +
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 36/210 (17%)
Query: 69 IGQGRLGTVYAALLS--TGKLV--AVKRIHPR-LVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G G G V +GK V AVK + P L A F + + H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ G P ++ V+E + SL L ++ G LL R A A G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLL--GTLSRYAVQVAEGMGYLE--- 138
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYW----HEK---- 235
+ IH + A N+LL + ++ D+GL P+ +DD++ H K
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---------NDDHYVMQEHRKVPFA 189
Query: 236 -------GGGNATRESDVYGFGVVLLEILS 258
+ SD + FGV L E+ +
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 16/215 (7%)
Query: 69 IGQGRLG-TVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
IG+G G + G+ +K I+ + S + L+ +HPNIV
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187
+ G IV ++ D + N L ++ L L+++H I
Sbjct: 92 FEENGSLYIVMDYCEGG--DLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KI 146
Query: 188 IHGCIKASNILLNEKFCARVCDYGLSFL---APEEKRGLAG---YVDDDYWHEKGGGNAT 241
+H IK+ NI L + ++ D+G++ + E R G Y+ + K N
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNN-- 204
Query: 242 RESDVYGFGVVLLEILSGRRC-EEGLLVKWALPLI 275
+SD++ G VL E+ + + E G + L +I
Sbjct: 205 -KSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 36/130 (27%)
Query: 158 SLLDW-NRR-----------LRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCA 205
+L DW NRR L I A +E+LH + ++H +K SNI
Sbjct: 147 NLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVV 203
Query: 206 RVCDYGL--SFLAPEEKR----------------GLAGYVDDDYWHEKGGGNATRESDVY 247
+V D+GL + EE++ G Y+ + H G N + + D++
Sbjct: 204 KVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIH---GNNYSHKVDIF 260
Query: 248 GFGVVLLEIL 257
G++L E+L
Sbjct: 261 SLGLILFELL 270
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 25/215 (11%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + IG G G V AA + G VAVK++ P ++A + ++ L H N
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV-LLKCVNHKN 82
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASL-------LDWNRRLRIATGAA 173
I+ +L P + + EF D YL A+L LD R +
Sbjct: 83 IISLLNVF-TPQKTL--EEF-----QDVYLVMELMDANLCQVIHMELDHERMSYLLYQML 134
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
G+++LH IIH +K SNI++ ++ D+GL+ A + YV Y+
Sbjct: 135 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-STNFMMTPYVVTRYYR 190
Query: 234 --EKGGGNATRES-DVYGFGVVLLEILSGRRCEEG 265
E G +E+ D++ G ++ E++ G +G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 40/167 (23%)
Query: 113 LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLR----- 167
L QHPNI+ + +V+E + G LLD R +
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMR-------------GGELLDKILRQKFFSER 121
Query: 168 ----IATGAARGLEYLH-QGVAPNIIHGCIKASNILLNEKF----CARVCDYGLSFLAPE 218
+ + +EYLH QGV +H +K SNIL ++ C R+CD+G +
Sbjct: 122 EASFVLHTIGKTVEYLHSQGV----VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA 177
Query: 219 EKRGL------AGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
E L A +V + +G D++ G++L +L+G
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEG---CDIWSLGILLYTMLAG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 38/166 (22%)
Query: 113 LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIAT-- 170
L QHPNI+ + +V+E + G LLD R + +
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMR-------------GGELLDKILRQKFFSER 121
Query: 171 -------GAARGLEYLHQGVAPNIIHGCIKASNILLNEKF----CARVCDYGLSFLAPEE 219
+ +EYLH + ++H +K SNIL ++ C R+CD+G + E
Sbjct: 122 EASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
Query: 220 KRGL------AGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
L A +V + +G D++ G++L +L+G
Sbjct: 179 NGLLMTPCYTANFVAPEVLKRQGYDEG---CDIWSLGILLYTMLAG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKVVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH--EK 235
+LH IIH +K SNI++ ++ D+GL+ A + YV Y+ E
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEV 196
Query: 236 GGGNATRES-DVYGFGVVLLEILSG 259
G +E+ D++ G ++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 63 FSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQHPN 120
F+ ++G+G G V + T +L AVK + +V+ + V K L+L P
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 121 IVPILGFSQAPGERI-IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
+ L +R+ V E++N L +++ + + A A GL +L
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFL 137
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGL------SFLAPEEKRGLAGYVDDDYWH 233
+ II+ +K N++L+ + ++ D+G+ + + G Y+ +
Sbjct: 138 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 194
Query: 234 EKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265
+ G + D + FGV+L E+L+G+ EG
Sbjct: 195 YQPYGKSV---DWWAFGVLLYEMLAGQAPFEG 223
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 48/273 (17%)
Query: 68 IIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127
++G+G GTV+A T +L ++ PR N G++ + +++ ++ +G
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPR----NRVLGWSPLSDSVTCPLEVALLWKVGA 93
Query: 128 SQA-PGERIIVSEFINMASLDFYLHENNDGASLLDW-NRRLRIATGAAR--------GLE 177
PG ++ F L L D+ + + G +R ++
Sbjct: 94 GGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ 153
Query: 178 YLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLAPEEKRGLAGYVDDD------ 230
+ H + ++H IK NIL++ + CA++ D+G L +E Y D D
Sbjct: 154 HCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP-----YTDFDGTRVYS 205
Query: 231 --YWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRL 288
W + +A + V+ G++L +++ G I R E+L+ L
Sbjct: 206 PPEWISRHQYHAL-PATVWSLGILLYDMVCGD--------------IPFERDQEILEAEL 250
Query: 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQV 321
P + P + C+ +RPS+ ++
Sbjct: 251 HFPAHVSP--DCCALIRRCLAPKPSSRPSLEEI 281
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 33/181 (18%)
Query: 53 LTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRL-------VLSNAGF- 104
+ E+ A ++ +R I G G V A + S G VA+KR+ + +LS++
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 105 -GFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHEN---NDGASLL 160
I+ L+ HPNI+ G R I F A YL D A ++
Sbjct: 74 KRVLREIRLLNHFHHPNIL---------GLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI 124
Query: 161 DWNRRLRIATGAAR--------GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212
++R+ I+ + GL LH+ ++H + NILL + +CD+ L
Sbjct: 125 H-DQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNL 180
Query: 213 S 213
+
Sbjct: 181 A 181
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 53 LTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRL-------VLSNAGFG 105
+ E+ A ++ +R I G G V A + S G VA+KR+ + +LS++ F
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDS-FL 72
Query: 106 FASVIKTLSLA---QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHEN---NDGASL 159
V++ + L HPNI+ G R I F A YL D A +
Sbjct: 73 CKRVLREIRLLNHFHHPNIL---------GLRDIFVHFEEPAMHKLYLVTELMRTDLAQV 123
Query: 160 LDWNRRLRIATGAAR--------GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211
+ ++R+ I+ + GL LH+ ++H + NILL + +CD+
Sbjct: 124 IH-DQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFN 179
Query: 212 LS 213
L+
Sbjct: 180 LA 181
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKVVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH--EK 235
+LH IIH +K SNI++ ++ D+GL+ A + YV Y+ E
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEV 196
Query: 236 GGGNATRES-DVYGFGVVLLEILSG 259
G +E+ D++ G ++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 24/204 (11%)
Query: 69 IGQGRLGTVYAALLS--TGKLV--AVKRIHPR-LVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G G G V +GK V AVK + P L A F + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ G P ++ V+E + SL L ++ G LL R A A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLL--GTLSRYAVQVAEGMGYLE--- 128
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAP---------EEKRGLAGYVDDDYWHE 234
+ IH + A N+LL + ++ D+GL P E ++ + +
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 235 KGGGNATRESDVYGFGVVLLEILS 258
+ +A SD + FGV L E+ +
Sbjct: 189 RTFSHA---SDTWMFGVTLWEMFT 209
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 34/115 (29%)
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF-------------LAPEE-- 219
G++Y+H I+H +K +N L+N+ +VCD+GL+ ++P E
Sbjct: 168 GVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 220 ------------KRGLAGYVDDDYWHEKG----GGNATRESDVYGFGVVLLEILS 258
KR L G+V ++ N T DV+ G + E+L+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
HPNI+ + + +V + + L YL E +L + R +I +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETR-KIMRALLEVIC 125
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF-LAPEEKR----GLAGYVDDDYW 232
LH+ NI+H +K NILL++ ++ D+G S L P EK G Y+ +
Sbjct: 126 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 182
Query: 233 HEKGGGNAT---RESDVYGFGVVLLEILSG 259
N +E D++ GV++ +L+G
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 20/204 (9%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVL--SNAGFGFASVIKTLSLAQHPNIVP 123
++IG+G G V ST K+ A+K + ++ S++ F F ++ A P +V
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF-FWEERDIMAFANSPWVVQ 138
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ Q +V E++ L L N D W R A L+ +H
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPE--KWARFYTAEVVLA--LDAIH--- 190
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-------GLAGYVDDDYWHEKG 236
+ IH +K N+LL++ ++ D+G +E G Y+ + +G
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 237 G-GNATRESDVYGFGVVLLEILSG 259
G G RE D + GV L E+L G
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + IG G G V AA + G VAVK++ P ++A + ++ L H N
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV-LLKCVNHKN 84
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASL-------LDWNRRLRIATGAA 173
I+ +L P + + EF D YL A+L LD R +
Sbjct: 85 IISLLNVF-TPQKTL--EEF-----QDVYLVMELMDANLCQVIHMELDHERMSYLLYQML 136
Query: 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH 233
G+++LH IIH +K SNI++ ++ D+GL+ A + YV Y+
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAC-TNFMMTPYVVTRYYR 192
Query: 234 EK----GGGNATRESDVYGFGVVLLEILSG 259
G G A D++ G ++ E++ G
Sbjct: 193 APEVILGMGYAAN-VDIWSVGCIMGELVKG 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
HPNI+ + + +V + + L YL E +L + R +I +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETR-KIMRALLEVIC 138
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR----GLAGYVDDDYW 232
LH+ NI+H +K NILL++ ++ D+G S L P EK G Y+ +
Sbjct: 139 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEII 195
Query: 233 HEKGGGNAT---RESDVYGFGVVLLEILSG 259
N +E D++ GV++ +L+G
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 20/204 (9%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVL--SNAGFGFASVIKTLSLAQHPNIVP 123
++IG+G G V ST K+ A+K + ++ S++ F F ++ A P +V
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF-FWEERDIMAFANSPWVVQ 138
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ Q +V E++ L L N D W R A L+ +H
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPE--KWARFYTAEVVLA--LDAIH--- 190
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-------GLAGYVDDDYWHEKG 236
+ IH +K N+LL++ ++ D+G +E G Y+ + +G
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 237 G-GNATRESDVYGFGVVLLEILSG 259
G G RE D + GV L E+L G
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 118 HPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
HPNI+ + + +V + + L YL E +L + R +I +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETR-KIMRALLEVIC 138
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS-FLAPEEKR----GLAGYVDDDYW 232
LH+ NI+H +K NILL++ ++ D+G S L P EK G Y+ +
Sbjct: 139 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 195
Query: 233 HEKGGGNAT---RESDVYGFGVVLLEILSG 259
N +E D++ GV++ +L+G
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 24/204 (11%)
Query: 69 IGQGRLGTVYAALLS--TGKLV--AVKRIHPR-LVLSNAGFGFASVIKTLSLAQHPNIVP 123
+G G G V +GK V AVK + P L A F + + H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ G P ++ V+E + SL L ++ G LL R A A G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLL--GTLSRYAVQVAEGMGYLE--- 138
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAP---------EEKRGLAGYVDDDYWHE 234
+ IH + A N+LL + ++ D+GL P E ++ + +
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 235 KGGGNATRESDVYGFGVVLLEILS 258
+ +A SD + FGV L E+ +
Sbjct: 199 RTFSHA---SDTWMFGVTLWEMFT 219
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 20/204 (9%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVL--SNAGFGFASVIKTLSLAQHPNIVP 123
++IG+G G V ST K+ A+K + ++ S++ F F ++ A P +V
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF-FWEERDIMAFANSPWVVQ 133
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ Q +V E++ L L N D W R A L+ +H
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPE--KWARFYTAEVVLA--LDAIH--- 185
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-------GLAGYVDDDYWHEKG 236
+ IH +K N+LL++ ++ D+G +E G Y+ + +G
Sbjct: 186 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 237 G-GNATRESDVYGFGVVLLEILSG 259
G G RE D + GV L E+L G
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 51/232 (21%)
Query: 63 FSHRRIIGQGRLGTVYAALLSTGKL-VAVKRIHPRLVLSNAGFGFASV---IKTLSLAQH 118
F + +G+G G V+ A A+KRI L N V +K L+ +H
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR----LPNRELAREKVMREVKALAKLEH 62
Query: 119 PNIVPILGFSQAPGERIIVSEFINMASLDFYLHENND---GASLLDW-NRR--------- 165
P IV + A E+ +E + +S YL+ +L DW N R
Sbjct: 63 PGIV---RYFNAWLEKN-TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 166 --LRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL--SFLAPEEKR 221
L I A +E+LH + ++H +K SNI +V D+GL + EE++
Sbjct: 119 VCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 222 ----------------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL 257
G Y+ + H G + + + D++ G++L E+L
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIH---GNSYSHKVDIFSLGLILFELL 224
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 63 FSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIK-TLSLAQHPN 120
F+ ++G+G G V + T +L AVK + +V+ + V K L+L P
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 121 IVPILGFSQAPGERI-IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
+ L +R+ V E++N L +++ + + A A GL +L
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFL 458
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGL------SFLAPEEKRGLAGYVDDDYWH 233
+ II+ +K N++L+ + ++ D+G+ + + G Y+ +
Sbjct: 459 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 515
Query: 234 EKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265
+ G + D + FGV+L E+L+G+ EG
Sbjct: 516 YQPYGKSV---DWWAFGVLLYEMLAGQAPFEG 544
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKCVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH--EK 235
+LH IIH +K SNI++ ++ D+GL+ A + YV Y+ E
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEV 196
Query: 236 GGGNATRES-DVYGFGVVLLEILSG 259
G +E+ D++ G ++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK 220
G ++H+ IIH +K +N LLN+ +VCD+GL+ EK
Sbjct: 141 GENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKCVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH--EK 235
+LH IIH +K SNI++ ++ D+GL+ A + YV Y+ E
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEV 196
Query: 236 GGGNATRES-DVYGFGVVLLEILSG 259
G +E+ D++ G ++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 20/204 (9%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVL---SNAGFGFASVIKTLSLAQHPNIVP 123
++IG+G G V + V ++ + + S++ F F ++ A P +V
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAF-FWEERDIMAFANSPWVVQ 139
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ Q +V E++ L L N D W + A L+ +H
Sbjct: 140 LFCAFQDDKYLYMVMEYMPGGDL-VNLMSNYDVPE--KWAKFYTAEVVLA--LDAIH--- 191
Query: 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR-------GLAGYVDDDYWHEKG 236
+ +IH +K N+LL++ ++ D+G E G Y+ + +G
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 237 G-GNATRESDVYGFGVVLLEILSG 259
G G RE D + GV L E+L G
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELV-LMKXVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ ++ M +D L + LD R + G++
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
+LH IIH +K SNI++ ++ D+GL+ A
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKCVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH--EK 235
+LH IIH +K SNI++ ++ D+GL+ A + YV Y+ E
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEV 196
Query: 236 GGGNATRES-DVYGFGVVLLEILSG 259
G +E+ D++ G ++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKCVNH 83
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 141
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH--EK 235
+LH IIH +K SNI++ ++ D+GL+ A + YV Y+ E
Sbjct: 142 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEV 197
Query: 236 GGGNATRES-DVYGFGVVLLEILSG 259
G +E+ D++ G ++ E++ G
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 111 KTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGAS--LLDWNRRLRI 168
+T Q P++VPI F + G+ + IN L L A + R++
Sbjct: 86 RTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGS 145
Query: 169 ATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK-RGLAGYV 227
A AA H+ V P NIL++ A + D+G++ +EK L V
Sbjct: 146 ALDAAHAAGATHRDVKPE---------NILVSADDFAYLVDFGIASATTDEKLTQLGNTV 196
Query: 228 DDDYWHEK---GGGNATRESDVYGFGVVLLEILSG 259
Y+ +AT +D+Y VL E L+G
Sbjct: 197 GTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 22/163 (13%)
Query: 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVK---RIHPRLVLSNAGFGFASVIKTLS-- 114
D + + +IG+G G VY A + K VA+K R+ L+ +++ L
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 115 --LAQHPNIVP--ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIAT 170
+ H I+P +L F + +I + D L + L I
Sbjct: 88 YIIRLHDLIIPEDLLKFDEL---------YIVLEIADSDLKKLFKTPIFLTEQHVKTILY 138
Query: 171 GAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213
G +++H+ IIH +K +N LLN+ ++CD+GL+
Sbjct: 139 NLLLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 84
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIKHL 142
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 69 IGQGRLGTVYAALLST------GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122
+G+G G V+ + ++ K V VK LV I L++A+H NI+
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKE--------ISILNIARHRNIL 64
Query: 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ- 181
+ ++ E +++ EFI + LD + N A L+ + L++LH
Sbjct: 65 HLHESFESMEELVMIFEFI--SGLDIF-ERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 182 -----GVAP-NIIHGCIKASNILLNEKFCARVC----DYGLSFLAPEEKRGLAGYVDDDY 231
+ P NII+ ++S I + E AR ++ L F APE Y + +
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE------YYAPEVH 175
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
H+ + +D++ G ++ +LSG
Sbjct: 176 QHDV----VSTATDMWSLGTLVYVLLSG 199
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKCVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH--EK 235
+LH IIH +K SNI++ ++ D+GL+ A + YV Y+ E
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEV 196
Query: 236 GGGNATRES-DVYGFGVVLLEILSG 259
G +E+ D++ G ++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 77
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIKHL 135
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 136 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA 169
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEIXINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEIXINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEIXINKMLNHENVVKFY 71
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 125
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 82/219 (37%), Gaps = 36/219 (16%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+I+G G GTV G+ VAVK R+++ + HPN++
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVK----RMLIDFCDIALMEIKLLTESDDHPNVIRY-- 92
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP- 185
+ +R + +I + + L + + ++ D N +L+ L + GVA
Sbjct: 93 YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 186 ---NIIHGCIKASNILL--NEKFCAR-----------VCDYGLSFLAPEEK--------- 220
IIH +K NIL+ + +F A + D+GL +
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 221 -RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS 258
G +G+ + E TR D++ G V ILS
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 82/219 (37%), Gaps = 36/219 (16%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+I+G G GTV G+ VAVK R+++ + HPN++
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVK----RMLIDFCDIALMEIKLLTESDDHPNVIRY-- 92
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP- 185
+ +R + +I + + L + + ++ D N +L+ L + GVA
Sbjct: 93 YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 186 ---NIIHGCIKASNILL--NEKFCAR-----------VCDYGLSFLAPEEK--------- 220
IIH +K NIL+ + +F A + D+GL +
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 221 -RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS 258
G +G+ + E TR D++ G V ILS
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 168 IATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK----RGL 223
I Y+H NI H +K SNIL+++ ++ D+G S ++K RG
Sbjct: 156 IIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGT 213
Query: 224 AGYVDDDYWHEKGGGNATRESDVYGFGVVL 253
++ +++ + N + D++ G+ L
Sbjct: 214 YEFMPPEFFSNESSYNGAK-VDIWSLGICL 242
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 40/230 (17%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRI-HPRLVLSN--------AGFGFAS 108
A+D F ++GQG G V A + + A+K+I H LS A
Sbjct: 5 ASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQY 63
Query: 109 VIKTLS-LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLR 167
V++ + + N V + + I E+ +L +H N ++ R R
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 168 IATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--------FLAPEE 219
A L Y+H + IIH +K NI ++E ++ D+GL+ L +
Sbjct: 124 QILEA---LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 220 KR------------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL 257
+ G A YV + G G+ + D+Y G++ E++
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVL--DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKXVNHKN 84
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLCGIKHL 142
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 40/230 (17%)
Query: 59 ATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRI-HPRLVLSN--------AGFGFAS 108
A+D F ++GQG G V A + + A+K+I H LS A
Sbjct: 5 ASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQY 63
Query: 109 VIKTLS-LAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLR 167
V++ + + N V + + I E+ +L +H N ++ R R
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 168 IATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS--------FLAPEE 219
A L Y+H + IIH +K NI ++E ++ D+GL+ L +
Sbjct: 124 QILEA---LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 220 KR------------GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL 257
+ G A YV + G G+ + D+Y G++ E++
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVL--DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKCVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
+LH IIH +K SNI++ ++ D+GL+ A
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKCVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
+LH IIH +K SNI++ ++ D+GL+ A
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I ++ H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINAMLNHENVVKFY 71
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 125
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKCVNH 76
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 134
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
+LH IIH +K SNI++ ++ D+GL+ A
Sbjct: 135 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKCVNH 87
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 145
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
+LH IIH +K SNI++ ++ D+GL+ A
Sbjct: 146 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 181
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKCVNH 84
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 142
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWH--EK 235
+LH IIH +K SNI++ ++ D+GL+ A + +V Y+ E
Sbjct: 143 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-MVPFVVTRYYRAPEV 198
Query: 236 GGGNATRES-DVYGFGVVLLEILSG 259
G +E+ D++ G ++ E++ G
Sbjct: 199 ILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 71
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 125
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3T6B|A Chain A, Structure Of Human Dppiii In Complex With The Opioid
Peptide Tynorphin, At 2.4 Angstroms
pdb|3T6B|B Chain B, Structure Of Human Dppiii In Complex With The Opioid
Peptide Tynorphin, At 2.4 Angstroms
pdb|3T6J|A Chain A, Structure Of Human Dppiii In Complex With The Opioid
Peptide Tynorphin, At 3.0 Angstroms
Length = 726
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 113 LSLAQHPNIVPILGFSQAPGERIIVSEFINMA-----SLDFYLHE 152
L L HP ++ I GF A E +I ++NM +L+FY E
Sbjct: 516 LYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAGLLALEFYTPE 560
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 69
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 70 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 123
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 124 -ITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|3FVY|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iii
Length = 728
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 113 LSLAQHPNIVPILGFSQAPGERIIVSEFINMA-----SLDFYLHE 152
L L HP ++ I GF A E +I ++NM +L+FY E
Sbjct: 518 LYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAGLLALEFYTPE 562
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 63 FSHRRIIGQGRLGTV---YAALLSTGKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQH 118
+ + + IG G G V Y A+L VA+K++ P ++A + ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV-LMKCVNH 82
Query: 119 PNIVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177
NI+ +L F+ +I M +D L + LD R + G++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIK 140
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
+LH IIH +K SNI++ ++ D+GL+ A
Sbjct: 141 HLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 71
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 125
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 71
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 125
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 71
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 125
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 71
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 125
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 84 TGKLVAVKRIHPR-LVLSNAGFGFASV---IKTLSLAQHPNIVPILGFSQAPGERIIVSE 139
TGK A K I R L S G + + L +HPNI+ + + + +++ E
Sbjct: 50 TGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 109
Query: 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILL 199
++ L +L E L + + G+ YLH + I H +K NI+L
Sbjct: 110 LVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIML 162
Query: 200 NEKFCA----RVCDYGLS 213
+K ++ D+G++
Sbjct: 163 LDKNVPNPRIKLIDFGIA 180
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 84 TGKLVAVKRIHPR-LVLSNAGFGFASV---IKTLSLAQHPNIVPILGFSQAPGERIIVSE 139
TGK A K I R L S G + + L +HPNI+ + + + +++ E
Sbjct: 36 TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 95
Query: 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILL 199
++ L +L E L + + G+ YLH + I H +K NI+L
Sbjct: 96 LVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIML 148
Query: 200 NEKFCA----RVCDYGLS 213
+K ++ D+G++
Sbjct: 149 LDKNVPNPRIKLIDFGIA 166
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 19/202 (9%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR--------GLAGYVDDDYWHEKGG 237
I H IK N+LL+E+ ++ D+GL+ + R G YV + +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 238 GNATRESDVYGFGVVLLEILSG 259
DV+ G+VL +L+G
Sbjct: 184 --HAEPVDVWSCGIVLTAMLAG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 70
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 71 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 124
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPIL 125
+ +G+G G V A+ T + VAVK + + + + I + H N+V
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFY 71
Query: 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185
G + + + E+ + L F E + G D R G+ YLH G+
Sbjct: 72 GHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH-GIG- 125
Query: 186 NIIHGCIKASNILLNEKFCARVCDYGLS 213
I H IK N+LL+E+ ++ D+GL+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 84 TGKLVAVKRIHPR-LVLSNAGFGFASV---IKTLSLAQHPNIVPILGFSQAPGERIIVSE 139
TGK A K I R L S G + + L +HPNI+ + + + +++ E
Sbjct: 29 TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 88
Query: 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILL 199
++ L +L E L + + G+ YLH + I H +K NI+L
Sbjct: 89 LVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIML 141
Query: 200 NEKFCA----RVCDYGLS 213
+K ++ D+G++
Sbjct: 142 LDKNVPNPRIKLIDFGIA 159
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKXVNHKN 84
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHL 142
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 84
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHL 142
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 85
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHL 143
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 144 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 122
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHL 180
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 181 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 122
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHL 180
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 181 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 83
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 84 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHL 141
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 142 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 175
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 78
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHL 136
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 137 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 85
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHL 143
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 144 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 78
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHL 136
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 137 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 84
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHL 142
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKRI-HPRLVLSNAGFGFASVIKTLSLAQHPN 120
+ + + IG G G V AA + + VA+K++ P ++A + ++ + H N
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKN 77
Query: 121 IVPILG-FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL 179
I+ +L F+ ++ M +D L + LD R + G+++L
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHL 135
Query: 180 HQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216
H IIH +K SNI++ ++ D+GL+ A
Sbjct: 136 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 24/204 (11%)
Query: 63 FSHRRIIGQGRLGTVYAALLST-GKLVAVKR-IHPRLVLSNAGFGFASVIKTLSLAQHPN 120
F +G G G V+ G+L AVKR + P + A V + QHP
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLD---WNRRLRIATGAARGLE 177
V + QA E I+ + H GASL + W LR A L
Sbjct: 119 CVRL---EQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGY-LRDTLLA---LA 171
Query: 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL-----SFLAPEEKRGLAGYVDDDYW 232
+LH + ++H +K +NI L + ++ D+GL + A E + G Y+ +
Sbjct: 172 HLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL 228
Query: 233 HEKGGGNATRESDVYGFGVVLLEI 256
G+ +DV+ G+ +LE+
Sbjct: 229 Q----GSYGTAADVFSLGLTILEV 248
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDYW 232
EYLH + ++I+ +K N+L++++ +V D+G + LAG Y+ +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEII 210
Query: 233 HEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 211 LSKGYNKAV---DWWALGVLIYEMAAG 234
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 83/223 (37%), Gaps = 40/223 (17%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+I+G G GTV G+ VAVK R+++ + HPN+ I
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVK----RMLIDFCDIALMEIKLLTESDDHPNV--IRY 74
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP- 185
+ +R + +I + + L + + ++ D N +L+ L + GVA
Sbjct: 75 YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 186 ---NIIHGCIKASNILL--NEKFCAR-----------VCDYGL---------SFLAP-EE 219
IIH +K NIL+ + +F A + D+GL SF
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 220 KRGLAGYVDDDYWHEKGGGNA----TRESDVYGFGVVLLEILS 258
G +G+ + E TR D++ G V ILS
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 85/215 (39%), Gaps = 31/215 (14%)
Query: 58 AATDGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA 116
A D F + IG G G V + TG A+K + + V+K +
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ-----------KVVKLKQIE 86
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL-RIATGAAR- 174
N IL P + F + ++L + + E G + RR+ R + AR
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNL-YMVMEYMPGGDMFSHLRRIGRFSEPHARF 145
Query: 175 -------GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG-- 225
EYLH + ++I+ +K N+L++++ +V D+G + L G
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTP 202
Query: 226 -YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
Y+ + KG A D + GV++ E+ +G
Sbjct: 203 EYLAPEIILSKGYNKAV---DWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 85/215 (39%), Gaps = 31/215 (14%)
Query: 58 AATDGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA 116
A D F + IG G G V + TG A+K + + V+K +
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ-----------KVVKLKQIE 86
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL-RIATGAAR- 174
N IL P + F + ++L + + E G + RR+ R + AR
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNL-YMVMEYMPGGDMFSHLRRIGRFSEPHARF 145
Query: 175 -------GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG-- 225
EYLH + ++I+ +K N+L++++ +V D+G + L G
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTP 202
Query: 226 -YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
Y+ + KG A D + GV++ E+ +G
Sbjct: 203 EYLAPEIILSKGYNKAV---DWWALGVLIYEMAAG 234
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIG 93
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 146
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 147 LLDRNVPKPRIKIIDFGLA 165
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 40/208 (19%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--------PNIVPILGFSQAPGER 134
+T L +RI L FG ++K + H +V + E+
Sbjct: 36 NTAHLDQFERIK---TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 135 IIVS--EFINMASLDFYLHENND---------GASLLDWNRRL-RIATGAAR-------- 174
I+ F + L+F +N++ G + RR+ R + AR
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDY 231
EYLH + ++I+ +K N+L++++ +V D+G + L G Y+ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEI 209
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 210 ILSKGYNKAV---DWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 40/208 (19%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--------PNIVPILGFSQAPGER 134
+T L +RI L FG ++K + H +V + E+
Sbjct: 37 NTAHLDQFERIK---TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 135 IIVS--EFINMASLDFYLHENND---------GASLLDWNRRL-RIATGAAR-------- 174
I+ F + L+F +N++ G + RR+ R + AR
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDY 231
EYLH + ++I+ +K N+L++++ +V D+G + L G Y+ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEI 210
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 211 ILSKGYNKAV---DWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 40/208 (19%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--------PNIVPILGFSQAPGER 134
+T L +RI L FG ++K + H +V + E+
Sbjct: 36 NTAHLDQFERIK---TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 135 IIVS--EFINMASLDFYLHENND---------GASLLDWNRRL-RIATGAAR-------- 174
I+ F + L+F +N++ G + RR+ R + AR
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDY 231
EYLH + ++I+ +K N+L++++ +V D+G + L G Y+ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEI 209
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 210 ILSKGYNKAV---DWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 40/208 (19%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--------PNIVPILGFSQAPGER 134
+T L +RI L FG ++K + H +V + E+
Sbjct: 36 NTAHLDQFERIK---TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 135 IIVS--EFINMASLDFYLHENND---------GASLLDWNRRL-RIATGAAR-------- 174
I+ F + L+F +N++ G + RR+ R + AR
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDY 231
EYLH + ++I+ +K N+L++++ +V D+G + L G Y+ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEI 209
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 210 ILSKGYNKAV---DWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 40/208 (19%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--------PNIVPILGFSQAPGER 134
+T L +RI L FG ++K + H +V + E+
Sbjct: 36 NTAHLDQFERIK---TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 135 IIVS--EFINMASLDFYLHENND---------GASLLDWNRRL-RIATGAAR-------- 174
I+ F + L+F +N++ G + RR+ R + AR
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDY 231
EYLH + ++I+ +K N+L++++ +V D+G + L G Y+ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEI 209
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 210 ILSKGYNKAV---DWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDYW 232
EYLH + ++I+ +K N+L++E+ +V D+G + L G Y+ +
Sbjct: 141 FEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII 197
Query: 233 HEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 198 LSKGYNKAV---DWWALGVLIYEMAAG 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 85/215 (39%), Gaps = 31/215 (14%)
Query: 58 AATDGFSHRRIIGQGRLGTVY-AALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA 116
A D F + IG G G V + TG A+K + + V+K +
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ-----------KVVKLKQIE 86
Query: 117 QHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRL-RIATGAAR- 174
N IL P + F + ++L + + E G + RR+ R + AR
Sbjct: 87 HTLNEKRILQAVNFPFLVKLEFSFKDNSNL-YMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 175 -------GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG-- 225
EYLH + ++I+ +K N+L++++ +V D+G + L G
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTP 202
Query: 226 -YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG 259
Y+ + KG A D + GV++ E+ +G
Sbjct: 203 EYLAPEIILSKGYNKAV---DWWALGVLIYEMAAG 234
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 16/154 (10%)
Query: 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVP 123
+G G+ V STG A K I R S+ G + + +S+ QHPN++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183
+ + + I++ E + L +L E L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH--- 131
Query: 184 APNIIHGCIKASNILLNEKFCA----RVCDYGLS 213
+ I H +K NI+L ++ ++ D+GL+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 264
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 15/72 (20%)
Query: 49 FAYPLTEIDAATDGFSHRRI---IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFG 105
F +P ++ A D +S RR+ +G GR A LLS KL A +H G
Sbjct: 140 FQFPTSKYGLALDNWSIRRLSSLVGHGR---ARAMLLSAEKLTAEIALH---------TG 187
Query: 106 FASVIKTLSLAQ 117
A+ I TL+ AQ
Sbjct: 188 MANRIGTLADAQ 199
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 13/138 (9%)
Query: 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126
+I+G G GTV G+ VAVK R+++ + HPN+ I
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVK----RMLIDFCDIALMEIKLLTESDDHPNV--IRY 74
Query: 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP- 185
+ +R + +I + + L + + ++ D N +L+ L + GVA
Sbjct: 75 YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 186 ---NIIHGCIKASNILLN 200
IIH +K NIL++
Sbjct: 132 HSLKIIHRDLKPQNILVS 149
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 93
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 146
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 147 LLDRNVPKPRIKIIDFGLA 165
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 93
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 146
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 147 LLDRNVPKPRIKIIDFGLA 165
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 93
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 146
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 147 LLDRNVPKPRIKIIDFGLA 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 93
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 146
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 147 LLDRNVPKPRIKIIDFGLA 165
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 93
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 146
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 147 LLDRNVPKPRIKIIDFGLA 165
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 33 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 92
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 93 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 145
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 146 LLDRNVPKPRIKIIDFGLA 164
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 93
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 146
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 147 LLDRNVPKPRIKIIDFGLA 165
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 80/208 (38%), Gaps = 40/208 (19%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--------PNIVPILGFSQAPGER 134
+T L +RI L FG ++K + H +V + E+
Sbjct: 37 NTAHLDQFERIK---TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 135 IIVS--EFINMASLDFYLHENND---------GASLLDWNRRL-RIATGAAR-------- 174
I+ F + L+F +N++ G + RR+ R AR
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDY 231
EYLH + ++I+ +K N+L++++ +V D+G + L G Y+ +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEI 210
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 211 ILSKGYNKAV---DWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 80/208 (38%), Gaps = 40/208 (19%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--------PNIVPILGFSQAPGER 134
+T L +RI L FG ++K + H +V + E+
Sbjct: 36 NTAHLDQFERIK---TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 135 IIVS--EFINMASLDFYLHENND---------GASLLDWNRRL-RIATGAAR-------- 174
I+ F + L+F +N++ G + RR+ R AR
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDY 231
EYLH + ++I+ +K N+L++++ +V D+G + L G Y+ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEI 209
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 210 ILSKGYNKAV---DWWALGVLIYEMAAG 234
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 33 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 92
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 93 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 145
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 146 LLDRNVPKPRIKIIDFGLA 164
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 23/190 (12%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 93
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 146
Query: 199 LNEKFCA----RVCDYGLSF---LAPEEKR--GLAGYVDDDYWHEKGGGNATRESDVYGF 249
L ++ ++ D+GL+ E K G +V + + + G E+D++
Sbjct: 147 LLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLG---LEADMWSI 203
Query: 250 GVVLLEILSG 259
GV+ +LSG
Sbjct: 204 GVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 93
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 146
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 147 LLDRNVPKPRIKIIDFGLA 165
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 93
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 146
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 147 LLDRNVPKPRIKIIDFGLA 165
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 80/208 (38%), Gaps = 40/208 (19%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--------PNIVPILGFSQAPGER 134
+T L +RI L FG ++K + H +V + E+
Sbjct: 36 NTAHLDQFERIK---TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 135 IIVS--EFINMASLDFYLHENND---------GASLLDWNRRL-RIATGAAR-------- 174
I+ F + L+F +N++ G + RR+ R AR
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDY 231
EYLH + ++I+ +K N+L++++ +V D+G + L G Y+ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEI 209
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 210 ILSKGYNKAV---DWWALGVLIYEMAAG 234
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 83 STGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSL---AQHPNIVPILGFSQAPGERIIVS 138
STG A K I R S+ G + + +S+ QHPN++ + + + I++
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 93
Query: 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198
E + L +L E L G+ YLH + I H +K NI+
Sbjct: 94 ELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIM 146
Query: 199 LNEKFCA----RVCDYGLS 213
L ++ ++ D+GL+
Sbjct: 147 LLDRNVPKPRIKIIDFGLA 165
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 80/208 (38%), Gaps = 40/208 (19%)
Query: 83 STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--------PNIVPILGFSQAPGER 134
+T +L RI L FG ++K H +V + E+
Sbjct: 36 NTAQLDQFDRIK---TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 135 IIVS--EFINMASLDFYLHENND---------GASLLDWNRRL-RIATGAAR-------- 174
I+ F + L+F +N++ G + RR+ R A AR
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVL 152
Query: 175 GLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDY 231
EYLH + ++I+ +K N+L++++ +V D+G + L G Y+ +
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEI 209
Query: 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 210 ILSKGYNKAV---DWWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 176 LEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAG---YVDDDYW 232
EYLH + ++I+ +K N+L++++ +V D+G + L G Y+ +
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 233 HEKGGGNATRESDVYGFGVVLLEILSG 259
KG A D + GV++ E+ +G
Sbjct: 212 LSKGYNKAV---DWWALGVLIYEMAAG 235
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,323,929
Number of Sequences: 62578
Number of extensions: 378190
Number of successful extensions: 2408
Number of sequences better than 100.0: 889
Number of HSP's better than 100.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 546
Number of HSP's that attempted gapping in prelim test: 1190
Number of HSP's gapped (non-prelim): 935
length of query: 332
length of database: 14,973,337
effective HSP length: 99
effective length of query: 233
effective length of database: 8,778,115
effective search space: 2045300795
effective search space used: 2045300795
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)