Query 020027
Match_columns 332
No_of_seqs 218 out of 2657
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 06:26:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020027.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020027hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.4E-56 3.1E-61 404.9 27.1 276 47-329 61-353 (361)
2 KOG0192 Tyrosine kinase specif 100.0 3.3E-53 7.2E-58 380.6 21.5 261 56-330 36-305 (362)
3 KOG0197 Tyrosine kinases [Sign 100.0 1.5E-53 3.2E-58 382.8 18.6 252 58-329 203-462 (468)
4 KOG0615 Serine/threonine prote 100.0 5.8E-52 1.3E-56 360.2 14.1 252 59-323 170-436 (475)
5 KOG0575 Polo-like serine/threo 100.0 5.9E-51 1.3E-55 370.0 20.9 243 61-323 18-268 (592)
6 KOG0595 Serine/threonine-prote 100.0 5.6E-51 1.2E-55 354.2 19.2 247 59-322 8-266 (429)
7 KOG0591 NIMA (never in mitosis 100.0 4.5E-52 9.7E-57 344.8 8.4 256 61-327 19-284 (375)
8 KOG0196 Tyrosine kinase, EPH ( 100.0 1.5E-51 3.3E-56 381.2 12.7 253 61-332 629-895 (996)
9 KOG0581 Mitogen-activated prot 100.0 1.2E-50 2.6E-55 349.0 17.2 244 61-323 79-334 (364)
10 KOG1026 Nerve growth factor re 100.0 2E-51 4.3E-56 386.2 12.7 254 60-329 485-763 (774)
11 KOG0193 Serine/threonine prote 100.0 1.1E-48 2.3E-53 354.2 13.4 264 53-330 384-655 (678)
12 KOG1095 Protein tyrosine kinas 100.0 1.7E-47 3.7E-52 371.6 16.5 255 60-330 691-963 (1025)
13 KOG0593 Predicted protein kina 100.0 2E-47 4.4E-52 320.0 14.5 254 61-323 2-283 (396)
14 KOG0194 Protein tyrosine kinas 100.0 1.1E-47 2.5E-52 349.7 14.1 260 54-330 150-422 (474)
15 KOG0661 MAPK related serine/th 100.0 2.1E-47 4.5E-52 337.2 11.5 254 60-324 9-291 (538)
16 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.8E-46 8.2E-51 338.4 19.6 258 58-331 4-337 (338)
17 KOG0598 Ribosomal protein S6 k 100.0 1.6E-46 3.5E-51 323.4 15.8 240 58-316 22-269 (357)
18 KOG0600 Cdc2-related protein k 100.0 1.9E-46 4.1E-51 333.3 16.5 257 58-323 114-399 (560)
19 KOG1094 Discoidin domain recep 100.0 3.8E-46 8.3E-51 335.8 18.4 258 62-330 539-806 (807)
20 KOG0198 MEKK and related serin 100.0 3.2E-46 6.9E-51 326.2 16.6 247 60-324 16-276 (313)
21 KOG0582 Ste20-like serine/thre 100.0 1.5E-45 3.3E-50 323.2 20.2 261 56-323 21-292 (516)
22 PHA02988 hypothetical protein; 100.0 6.2E-45 1.3E-49 322.3 23.3 249 64-328 23-279 (283)
23 KOG0659 Cdk activating kinase 100.0 2.2E-45 4.7E-50 302.7 18.6 255 61-324 2-281 (318)
24 KOG4721 Serine/threonine prote 100.0 6.2E-47 1.3E-51 340.1 10.2 239 60-326 123-366 (904)
25 KOG0592 3-phosphoinositide-dep 100.0 1.1E-45 2.4E-50 330.9 17.3 246 58-323 70-337 (604)
26 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.4E-45 1.6E-49 319.0 21.3 251 60-329 4-266 (266)
27 KOG0583 Serine/threonine prote 100.0 1E-44 2.2E-49 328.5 22.8 248 58-322 14-273 (370)
28 KOG4278 Protein tyrosine kinas 100.0 1.2E-45 2.6E-50 334.8 14.1 258 54-331 260-526 (1157)
29 KOG0597 Serine-threonine prote 100.0 2.1E-45 4.6E-50 330.1 15.4 242 61-323 2-250 (808)
30 cd05096 PTKc_DDR1 Catalytic do 100.0 3.8E-44 8.3E-49 320.5 23.5 259 60-327 4-304 (304)
31 cd05612 STKc_PRKX_like Catalyt 100.0 1.4E-44 3E-49 321.4 18.5 243 61-323 1-253 (291)
32 KOG0578 p21-activated serine/t 100.0 8E-45 1.7E-49 327.6 16.8 243 61-323 273-522 (550)
33 KOG2345 Serine/threonine prote 100.0 4E-45 8.7E-50 298.4 13.4 263 57-329 17-301 (302)
34 KOG4257 Focal adhesion tyrosin 100.0 6.6E-45 1.4E-49 330.0 15.8 249 62-330 390-651 (974)
35 cd05108 PTKc_EGFR Catalytic do 100.0 9.4E-44 2E-48 319.7 22.0 253 60-332 6-272 (316)
36 KOG0605 NDR and related serine 100.0 2.3E-44 5E-49 322.5 17.8 242 59-317 139-435 (550)
37 PTZ00263 protein kinase A cata 100.0 2.3E-44 5E-49 325.4 17.8 243 60-322 17-269 (329)
38 cd05104 PTKc_Kit Catalytic dom 100.0 5.6E-44 1.2E-48 328.3 20.5 256 57-328 31-374 (375)
39 KOG1025 Epidermal growth facto 100.0 1.7E-44 3.6E-49 335.9 16.9 250 63-332 698-961 (1177)
40 cd05106 PTKc_CSF-1R Catalytic 100.0 4.8E-44 1E-48 328.5 19.5 259 56-329 33-373 (374)
41 cd05631 STKc_GRK4 Catalytic do 100.0 6.5E-44 1.4E-48 316.2 19.5 248 62-323 1-260 (285)
42 cd05048 PTKc_Ror Catalytic Dom 100.0 1.7E-43 3.7E-48 312.8 22.0 252 61-328 5-283 (283)
43 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.1E-43 4.6E-48 307.8 22.0 245 61-326 4-256 (256)
44 PF07714 Pkinase_Tyr: Protein 100.0 3.3E-44 7.1E-49 313.7 16.7 242 66-325 4-259 (259)
45 cd06649 PKc_MEK2 Catalytic dom 100.0 2.5E-43 5.4E-48 318.9 22.8 255 60-324 4-301 (331)
46 cd05571 STKc_PKB Catalytic dom 100.0 6.7E-44 1.5E-48 321.6 18.7 237 67-323 1-250 (323)
47 PLN00113 leucine-rich repeat r 100.0 7.7E-43 1.7E-47 356.7 28.9 254 60-330 689-953 (968)
48 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 8.7E-44 1.9E-48 322.2 19.4 252 61-324 1-257 (333)
49 KOG0611 Predicted serine/threo 100.0 2E-44 4.4E-49 312.7 14.4 247 58-324 50-303 (668)
50 cd05072 PTKc_Lyn Catalytic dom 100.0 1.8E-43 3.8E-48 309.1 20.6 250 59-328 4-261 (261)
51 cd05052 PTKc_Abl Catalytic dom 100.0 2.5E-43 5.4E-48 308.7 21.6 249 60-328 5-262 (263)
52 cd07848 STKc_CDKL5 Catalytic d 100.0 3.2E-43 6.9E-48 311.8 22.4 253 61-323 1-283 (287)
53 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3E-43 6.6E-48 312.3 21.9 254 60-323 4-284 (288)
54 cd05033 PTKc_EphR Catalytic do 100.0 5.7E-43 1.2E-47 306.8 22.9 251 60-329 3-266 (266)
55 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.9E-43 4.1E-48 308.8 19.2 252 58-328 3-261 (261)
56 cd05068 PTKc_Frk_like Catalyti 100.0 6.8E-43 1.5E-47 305.5 22.7 250 59-328 4-261 (261)
57 cd05111 PTK_HER3 Pseudokinase 100.0 7.2E-43 1.6E-47 308.5 22.9 252 61-332 7-272 (279)
58 KOG0663 Protein kinase PITSLRE 100.0 1.2E-43 2.6E-48 301.0 17.0 257 58-323 73-360 (419)
59 PTZ00283 serine/threonine prot 100.0 2.5E-43 5.4E-48 333.9 21.1 255 55-324 26-297 (496)
60 cd08228 STKc_Nek6 Catalytic do 100.0 5.5E-43 1.2E-47 306.9 21.6 254 61-328 2-265 (267)
61 KOG1989 ARK protein kinase fam 100.0 1.3E-43 2.7E-48 334.9 18.5 258 56-330 32-313 (738)
62 cd05585 STKc_YPK1_like Catalyt 100.0 1.5E-43 3.2E-48 317.9 18.0 231 69-319 1-239 (312)
63 KOG0616 cAMP-dependent protein 100.0 9E-44 2E-48 297.3 15.0 237 59-315 42-283 (355)
64 cd05075 PTKc_Axl Catalytic dom 100.0 1.3E-42 2.9E-47 305.3 23.3 251 64-329 2-272 (272)
65 cd05595 STKc_PKB_beta Catalyti 100.0 3.5E-43 7.7E-48 316.9 19.9 237 67-323 1-250 (323)
66 cd05062 PTKc_IGF-1R Catalytic 100.0 6.6E-43 1.4E-47 308.3 21.1 254 58-327 3-277 (277)
67 cd05593 STKc_PKB_gamma Catalyt 100.0 3.8E-43 8.3E-48 317.2 19.9 237 67-323 1-250 (328)
68 cd05054 PTKc_VEGFR Catalytic d 100.0 3.6E-43 7.8E-48 318.5 19.3 258 59-332 5-337 (337)
69 PTZ00426 cAMP-dependent protei 100.0 2.5E-43 5.4E-48 319.7 18.1 245 59-323 28-283 (340)
70 cd05116 PTKc_Syk Catalytic dom 100.0 1.6E-42 3.4E-47 302.5 22.3 240 68-327 2-254 (257)
71 cd07862 STKc_CDK6 Catalytic do 100.0 9E-43 1.9E-47 309.4 21.1 254 61-323 1-286 (290)
72 cd05105 PTKc_PDGFR_alpha Catal 100.0 8.6E-43 1.9E-47 321.9 21.6 259 56-330 32-399 (400)
73 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.4E-42 3E-47 302.8 21.8 245 61-326 4-256 (256)
74 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.6E-42 3.6E-47 309.8 22.8 254 60-323 4-287 (303)
75 cd05628 STKc_NDR1 Catalytic do 100.0 7.3E-43 1.6E-47 319.8 20.8 248 61-324 1-293 (363)
76 KOG0588 Serine/threonine prote 100.0 3.6E-43 7.8E-48 321.1 18.3 244 61-323 12-262 (786)
77 PTZ00267 NIMA-related protein 100.0 7.3E-43 1.6E-47 330.2 20.9 245 62-323 68-322 (478)
78 cd05043 PTK_Ryk Pseudokinase d 100.0 1.3E-42 2.8E-47 306.8 21.1 257 58-330 3-278 (280)
79 cd06650 PKc_MEK1 Catalytic dom 100.0 1.3E-42 2.8E-47 314.4 21.6 254 59-323 3-298 (333)
80 cd05093 PTKc_TrkB Catalytic do 100.0 1.7E-42 3.7E-47 307.5 21.9 254 60-330 4-281 (288)
81 cd05035 PTKc_Axl_like Catalyti 100.0 2.4E-42 5.2E-47 303.6 22.6 252 63-329 1-273 (273)
82 KOG0589 Serine/threonine prote 100.0 1.5E-43 3.2E-48 317.2 14.9 247 61-324 4-258 (426)
83 cd05059 PTKc_Tec_like Catalyti 100.0 1.7E-42 3.7E-47 302.2 21.4 245 61-326 4-256 (256)
84 cd05053 PTKc_FGFR Catalytic do 100.0 7.8E-43 1.7E-47 310.2 19.5 258 56-329 7-292 (293)
85 cd05084 PTKc_Fes Catalytic dom 100.0 2.8E-42 6E-47 300.0 22.5 242 67-327 1-252 (252)
86 KOG0580 Serine/threonine prote 100.0 1.8E-43 3.9E-48 287.4 13.8 247 59-323 20-272 (281)
87 cd05049 PTKc_Trk Catalytic dom 100.0 2E-42 4.4E-47 305.4 21.7 252 60-327 4-280 (280)
88 cd05599 STKc_NDR_like Catalyti 100.0 4.3E-43 9.3E-48 321.5 18.0 246 61-323 1-295 (364)
89 KOG0201 Serine/threonine prote 100.0 3.3E-44 7.1E-49 314.4 9.8 244 60-323 12-262 (467)
90 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.1E-42 4.6E-47 303.5 21.3 251 60-329 4-268 (268)
91 cd05626 STKc_LATS2 Catalytic d 100.0 9.7E-43 2.1E-47 320.9 20.1 246 62-323 2-304 (381)
92 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.2E-43 6.9E-48 320.6 16.4 247 61-324 1-285 (350)
93 KOG0594 Protein kinase PCTAIRE 100.0 8.4E-43 1.8E-47 300.1 17.8 259 60-324 10-302 (323)
94 cd08529 STKc_FA2-like Catalyti 100.0 3.8E-42 8.3E-47 299.5 22.3 246 62-324 1-253 (256)
95 cd05045 PTKc_RET Catalytic dom 100.0 3.4E-42 7.4E-47 305.8 22.3 254 62-331 1-289 (290)
96 cd05109 PTKc_HER2 Catalytic do 100.0 3.6E-42 7.9E-47 303.9 22.3 253 60-332 6-272 (279)
97 cd05089 PTKc_Tie1 Catalytic do 100.0 3.8E-42 8.2E-47 306.6 22.3 253 61-329 2-276 (297)
98 cd05589 STKc_PKN Catalytic dom 100.0 1.9E-42 4.2E-47 312.2 20.6 240 63-323 1-256 (324)
99 cd08229 STKc_Nek7 Catalytic do 100.0 2.3E-42 4.9E-47 303.0 20.4 254 61-328 2-265 (267)
100 cd05090 PTKc_Ror1 Catalytic do 100.0 3.5E-42 7.7E-47 304.6 21.7 251 61-327 5-282 (283)
101 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.7E-42 3.6E-47 314.3 20.1 253 62-323 1-289 (338)
102 cd05582 STKc_RSK_N N-terminal 100.0 2.8E-43 6E-48 316.9 14.7 234 67-320 2-245 (318)
103 cd05115 PTKc_Zap-70 Catalytic 100.0 5.3E-42 1.1E-46 299.4 22.2 241 68-328 2-255 (257)
104 cd05584 STKc_p70S6K Catalytic 100.0 1.6E-42 3.5E-47 312.6 19.5 237 67-323 2-255 (323)
105 cd05594 STKc_PKB_alpha Catalyt 100.0 6.7E-43 1.5E-47 315.4 17.1 237 67-323 1-251 (325)
106 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 5.5E-42 1.2E-46 300.4 22.2 255 61-329 2-266 (267)
107 cd05590 STKc_nPKC_eta Catalyti 100.0 1.6E-42 3.5E-47 312.1 19.2 232 67-318 1-241 (320)
108 cd05629 STKc_NDR_like_fungal C 100.0 1E-42 2.2E-47 320.5 18.0 247 61-324 1-305 (377)
109 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.5E-42 1.2E-46 299.6 21.8 248 59-327 4-259 (260)
110 PLN00034 mitogen-activated pro 100.0 1.6E-42 3.5E-47 316.4 19.1 247 60-324 73-328 (353)
111 cd05032 PTKc_InsR_like Catalyt 100.0 2.4E-42 5.2E-47 304.5 19.5 253 59-327 4-277 (277)
112 cd05085 PTKc_Fer Catalytic dom 100.0 1.1E-41 2.4E-46 295.8 23.1 241 67-326 1-249 (250)
113 cd05601 STKc_CRIK Catalytic do 100.0 6.2E-43 1.3E-47 316.3 15.9 250 61-323 1-262 (330)
114 cd05607 STKc_GRK7 Catalytic do 100.0 4.4E-42 9.5E-47 303.2 20.9 244 69-325 1-251 (277)
115 cd05596 STKc_ROCK Catalytic do 100.0 9.5E-43 2.1E-47 319.6 17.3 252 58-323 40-303 (370)
116 cd05592 STKc_nPKC_theta_delta 100.0 3.5E-42 7.5E-47 309.5 20.4 236 67-322 1-246 (316)
117 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.7E-42 8E-47 304.5 20.0 254 64-329 7-282 (283)
118 KOG0660 Mitogen-activated prot 100.0 3.8E-43 8.3E-48 301.5 13.2 254 60-323 21-309 (359)
119 cd07853 STKc_NLK Catalytic dom 100.0 4.3E-42 9.3E-47 315.7 21.2 252 62-323 1-287 (372)
120 cd05066 PTKc_EphR_A Catalytic 100.0 8E-42 1.7E-46 299.8 21.8 251 60-329 3-267 (267)
121 cd05570 STKc_PKC Catalytic dom 100.0 3.3E-42 7.2E-47 309.9 19.8 237 67-323 1-251 (318)
122 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.1E-41 2.4E-46 297.6 22.6 247 60-327 5-259 (260)
123 cd05605 STKc_GRK4_like Catalyt 100.0 3.8E-42 8.2E-47 304.8 19.8 248 62-323 1-260 (285)
124 cd05591 STKc_nPKC_epsilon Cata 100.0 2.2E-42 4.8E-47 311.4 18.6 237 67-323 1-253 (321)
125 cd05088 PTKc_Tie2 Catalytic do 100.0 4.5E-42 9.7E-47 307.0 20.4 255 60-330 6-282 (303)
126 PTZ00036 glycogen synthase kin 100.0 3.3E-42 7.2E-47 322.3 20.4 252 60-323 65-350 (440)
127 cd06646 STKc_MAP4K5 Catalytic 100.0 5.4E-42 1.2E-46 300.7 20.5 252 60-325 8-266 (267)
128 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.6E-42 1.2E-46 306.5 20.9 258 57-330 11-298 (304)
129 cd05071 PTKc_Src Catalytic dom 100.0 1.3E-41 2.9E-46 297.6 22.9 248 60-328 5-260 (262)
130 cd05094 PTKc_TrkC Catalytic do 100.0 8E-42 1.7E-46 303.6 21.7 253 61-330 5-284 (291)
131 KOG3653 Transforming growth fa 100.0 3.3E-42 7.1E-47 304.0 18.9 255 60-329 209-504 (534)
132 cd05107 PTKc_PDGFR_beta Cataly 100.0 4E-42 8.7E-47 317.3 20.4 259 55-329 31-400 (401)
133 cd05091 PTKc_Ror2 Catalytic do 100.0 3E-42 6.4E-47 305.0 18.7 251 61-327 5-282 (283)
134 cd05619 STKc_nPKC_theta Cataly 100.0 4.8E-42 1E-46 308.5 20.3 236 67-322 1-246 (316)
135 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.8E-42 1.5E-46 301.9 20.8 253 59-327 4-277 (277)
136 cd05587 STKc_cPKC Catalytic do 100.0 4.2E-42 9.2E-47 310.0 19.8 237 62-318 1-246 (324)
137 KOG0585 Ca2+/calmodulin-depend 100.0 3.7E-42 8.1E-47 303.8 18.8 250 59-323 95-371 (576)
138 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.9E-41 4.2E-46 297.7 23.5 251 67-326 1-268 (269)
139 cd05061 PTKc_InsR Catalytic do 100.0 8.6E-42 1.9E-46 303.0 21.2 256 58-329 3-279 (288)
140 cd05608 STKc_GRK1 Catalytic do 100.0 4.2E-42 9.1E-47 303.8 19.1 243 69-323 1-256 (280)
141 cd05034 PTKc_Src_like Catalyti 100.0 1.9E-41 4.1E-46 296.2 22.9 250 58-327 3-260 (261)
142 cd05097 PTKc_DDR_like Catalyti 100.0 1.1E-41 2.4E-46 303.2 21.9 259 60-327 4-295 (295)
143 cd05039 PTKc_Csk_like Catalyti 100.0 2.2E-41 4.7E-46 295.0 23.2 248 60-328 5-256 (256)
144 cd05057 PTKc_EGFR_like Catalyt 100.0 1.7E-41 3.7E-46 299.6 22.6 253 60-332 6-272 (279)
145 cd05620 STKc_nPKC_delta Cataly 100.0 6E-42 1.3E-46 308.0 20.0 236 67-322 1-246 (316)
146 cd05082 PTKc_Csk Catalytic dom 100.0 1.8E-41 4E-46 295.6 22.5 247 60-328 5-256 (256)
147 cd05047 PTKc_Tie Catalytic dom 100.0 1.6E-41 3.5E-46 298.4 22.3 248 67-330 1-270 (270)
148 cd05621 STKc_ROCK2 Catalytic d 100.0 2.6E-42 5.7E-47 316.4 17.9 255 56-324 38-304 (370)
149 cd05051 PTKc_DDR Catalytic dom 100.0 1.8E-41 3.9E-46 301.8 22.6 259 60-327 4-296 (296)
150 KOG0658 Glycogen synthase kina 100.0 6E-43 1.3E-47 300.9 12.6 250 62-323 25-305 (364)
151 cd05069 PTKc_Yes Catalytic dom 100.0 3.3E-41 7.2E-46 294.7 23.8 246 61-327 6-259 (260)
152 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.8E-42 1.7E-46 306.0 20.2 257 58-330 15-301 (307)
153 cd05616 STKc_cPKC_beta Catalyt 100.0 5.6E-42 1.2E-46 309.1 19.3 237 62-318 1-246 (323)
154 cd05598 STKc_LATS Catalytic do 100.0 2E-42 4.4E-47 318.4 16.7 246 61-323 1-300 (376)
155 cd05055 PTKc_PDGFR Catalytic d 100.0 1.2E-41 2.7E-46 304.0 21.3 256 57-329 31-302 (302)
156 cd05050 PTKc_Musk Catalytic do 100.0 1.2E-41 2.7E-46 301.8 20.7 253 59-327 3-288 (288)
157 cd05095 PTKc_DDR2 Catalytic do 100.0 2.4E-41 5.2E-46 301.3 22.6 258 61-327 5-296 (296)
158 cd05065 PTKc_EphR_B Catalytic 100.0 1.6E-41 3.5E-46 298.1 21.1 248 62-328 5-268 (269)
159 cd05625 STKc_LATS1 Catalytic d 100.0 4E-42 8.7E-47 317.0 18.1 245 62-323 2-304 (382)
160 PHA03212 serine/threonine kina 100.0 1.9E-41 4.1E-46 312.6 22.5 245 60-323 91-375 (391)
161 cd05575 STKc_SGK Catalytic dom 100.0 4E-42 8.6E-47 310.1 17.6 233 67-319 1-242 (323)
162 cd05060 PTKc_Syk_like Catalyti 100.0 2.6E-41 5.6E-46 294.8 22.2 242 67-329 1-256 (257)
163 cd07863 STKc_CDK4 Catalytic do 100.0 2.1E-41 4.6E-46 300.2 21.7 253 62-323 1-284 (288)
164 cd05588 STKc_aPKC Catalytic do 100.0 9.7E-42 2.1E-46 308.3 19.8 232 67-318 1-250 (329)
165 KOG0599 Phosphorylase kinase g 100.0 1.5E-42 3.3E-47 287.1 13.3 252 59-323 15-282 (411)
166 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.5E-41 3.3E-46 300.6 20.6 256 61-328 4-283 (284)
167 cd05092 PTKc_TrkA Catalytic do 100.0 1.9E-41 4.1E-46 299.5 21.0 251 60-327 4-280 (280)
168 cd06625 STKc_MEKK3_like Cataly 100.0 4.2E-41 9.1E-46 294.2 22.9 246 61-324 2-260 (263)
169 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.7E-41 1.2E-45 294.6 23.8 250 68-326 2-267 (268)
170 KOG0199 ACK and related non-re 100.0 1.8E-42 4E-47 317.6 14.5 243 64-325 113-369 (1039)
171 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.8E-41 6.1E-46 302.7 22.0 253 61-323 6-285 (309)
172 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.3E-41 7.1E-46 295.2 21.9 238 67-325 1-261 (262)
173 cd08221 STKc_Nek9 Catalytic do 100.0 3.9E-41 8.4E-46 293.4 22.2 246 62-324 1-253 (256)
174 cd05058 PTKc_Met_Ron Catalytic 100.0 4.5E-41 9.7E-46 294.0 22.6 245 67-330 1-261 (262)
175 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.5E-41 5.4E-46 303.7 21.2 256 58-329 9-294 (314)
176 KOG0694 Serine/threonine prote 100.0 6.2E-42 1.4E-46 314.8 17.5 241 57-318 364-613 (694)
177 cd05622 STKc_ROCK1 Catalytic d 100.0 9.3E-42 2E-46 313.0 18.7 257 54-324 36-304 (371)
178 cd05618 STKc_aPKC_iota Catalyt 100.0 1.3E-41 2.8E-46 307.4 19.4 232 67-318 1-250 (329)
179 cd05110 PTKc_HER4 Catalytic do 100.0 3.3E-41 7.1E-46 301.4 21.6 252 60-331 6-271 (303)
180 cd05042 PTKc_Aatyk Catalytic d 100.0 5.4E-41 1.2E-45 294.8 22.6 251 67-326 1-268 (269)
181 cd06654 STKc_PAK1 Catalytic do 100.0 3.9E-41 8.5E-46 300.0 21.8 244 60-323 19-269 (296)
182 cd05040 PTKc_Ack_like Catalyti 100.0 4.8E-41 1E-45 293.0 21.9 242 67-326 1-256 (257)
183 cd05614 STKc_MSK2_N N-terminal 100.0 6.9E-42 1.5E-46 309.7 17.2 243 62-323 1-266 (332)
184 cd05602 STKc_SGK1 Catalytic do 100.0 9.3E-42 2E-46 307.9 17.9 239 67-325 1-248 (325)
185 cd08219 STKc_Nek3 Catalytic do 100.0 3.8E-41 8.3E-46 293.3 21.1 245 62-324 1-252 (255)
186 cd08227 PK_STRAD_alpha Pseudok 100.0 3.3E-41 7.1E-46 304.6 21.3 253 65-323 2-306 (327)
187 cd07876 STKc_JNK2 Catalytic do 100.0 3.8E-41 8.2E-46 308.0 21.6 252 59-323 19-314 (359)
188 cd06637 STKc_TNIK Catalytic do 100.0 3.7E-41 8E-46 296.1 20.7 249 59-323 4-268 (272)
189 cd05627 STKc_NDR2 Catalytic do 100.0 6.6E-42 1.4E-46 313.1 16.5 246 61-323 1-292 (360)
190 cd07875 STKc_JNK1 Catalytic do 100.0 4E-41 8.7E-46 308.4 21.6 252 59-323 22-317 (364)
191 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.6E-41 1E-45 296.2 21.0 238 68-326 2-274 (274)
192 cd05615 STKc_cPKC_alpha Cataly 100.0 3E-41 6.5E-46 304.3 20.0 237 62-318 1-246 (323)
193 cd05073 PTKc_Hck Catalytic dom 100.0 7E-41 1.5E-45 292.7 21.7 248 59-327 4-259 (260)
194 cd05604 STKc_SGK3 Catalytic do 100.0 8.9E-42 1.9E-46 308.1 16.5 238 67-324 1-247 (325)
195 KOG0033 Ca2+/calmodulin-depend 100.0 1.7E-43 3.6E-48 288.6 4.7 248 60-323 10-266 (355)
196 cd05041 PTKc_Fes_like Catalyti 100.0 9E-41 2E-45 290.2 22.1 242 67-327 1-251 (251)
197 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.2E-41 7E-46 306.6 20.0 256 59-330 5-341 (343)
198 cd00192 PTKc Catalytic domain 100.0 1.2E-40 2.7E-45 290.4 22.9 244 67-326 1-262 (262)
199 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.1E-41 4.6E-46 299.3 18.2 259 61-329 4-284 (284)
200 cd07861 STKc_CDK1_euk Catalyti 100.0 8.2E-41 1.8E-45 295.9 21.9 255 62-323 1-281 (285)
201 cd06619 PKc_MKK5 Catalytic dom 100.0 4.1E-41 8.9E-46 297.2 19.9 248 61-324 1-253 (279)
202 KOG0577 Serine/threonine prote 100.0 1.8E-42 3.9E-47 312.6 11.3 248 62-324 27-278 (948)
203 cd07874 STKc_JNK3 Catalytic do 100.0 3.8E-41 8.2E-46 307.6 20.2 254 58-324 14-311 (355)
204 cd05603 STKc_SGK2 Catalytic do 100.0 1.8E-41 3.9E-46 305.5 17.8 233 67-319 1-242 (321)
205 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.7E-41 1.2E-45 303.9 21.1 257 57-329 8-294 (334)
206 cd05112 PTKc_Itk Catalytic dom 100.0 1E-40 2.3E-45 290.7 21.9 245 61-326 4-256 (256)
207 cd06615 PKc_MEK Catalytic doma 100.0 9.5E-41 2.1E-45 299.1 22.2 251 61-324 1-287 (308)
208 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.1E-40 4.5E-45 293.4 24.1 254 61-323 1-282 (286)
209 cd08220 STKc_Nek8 Catalytic do 100.0 1.4E-40 3.1E-45 289.6 22.5 245 62-323 1-252 (256)
210 cd05056 PTKc_FAK Catalytic dom 100.0 7.1E-41 1.5E-45 294.2 20.6 253 59-331 4-268 (270)
211 cd08223 STKc_Nek4 Catalytic do 100.0 1.3E-40 2.8E-45 290.1 22.1 245 62-323 1-253 (257)
212 cd06645 STKc_MAP4K3 Catalytic 100.0 4.6E-41 1E-45 294.8 19.4 249 61-323 9-264 (267)
213 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 9.5E-41 2.1E-45 295.6 21.4 257 62-329 5-284 (284)
214 cd05083 PTKc_Chk Catalytic dom 100.0 1E-40 2.3E-45 290.5 21.3 244 61-327 6-253 (254)
215 cd06638 STKc_myosinIIIA Cataly 100.0 6.7E-41 1.5E-45 296.7 20.2 258 54-324 11-283 (286)
216 cd06613 STKc_MAP4K3_like Catal 100.0 2.9E-40 6.2E-45 288.7 23.8 251 60-323 2-259 (262)
217 cd06644 STKc_STK10_LOK Catalyt 100.0 1.5E-40 3.3E-45 295.5 22.5 249 60-323 11-268 (292)
218 cd05632 STKc_GRK5 Catalytic do 100.0 9.5E-41 2.1E-45 295.9 21.0 247 63-323 2-260 (285)
219 cd06631 STKc_YSK4 Catalytic do 100.0 1.7E-40 3.8E-45 290.8 22.4 245 62-323 1-261 (265)
220 PRK13184 pknD serine/threonine 100.0 5.3E-41 1.1E-45 328.1 21.0 256 61-329 2-291 (932)
221 cd08218 STKc_Nek1 Catalytic do 100.0 1.1E-40 2.5E-45 290.4 21.0 245 62-323 1-252 (256)
222 cd06612 STKc_MST1_2 Catalytic 100.0 1.4E-40 3.1E-45 289.6 21.6 244 60-323 2-252 (256)
223 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.3E-40 5.1E-45 290.3 22.8 242 63-323 2-263 (267)
224 cd06643 STKc_SLK Catalytic dom 100.0 1.2E-40 2.5E-45 294.7 20.9 246 63-323 7-261 (282)
225 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.2E-41 6.9E-46 294.6 17.0 239 67-326 1-258 (258)
226 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.2E-40 4.8E-45 288.9 21.9 238 67-326 1-259 (259)
227 cd08528 STKc_Nek10 Catalytic d 100.0 2.7E-40 5.7E-45 290.3 22.6 252 62-327 1-269 (269)
228 cd07878 STKc_p38beta_MAPK11 Ca 100.0 8.6E-41 1.9E-45 303.9 20.1 254 59-323 13-297 (343)
229 PF00069 Pkinase: Protein kina 100.0 2.4E-41 5.2E-46 295.0 15.8 249 63-323 1-256 (260)
230 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.7E-40 3.7E-45 296.4 21.6 254 60-323 5-285 (301)
231 cd06655 STKc_PAK2 Catalytic do 100.0 2.1E-40 4.5E-45 295.3 22.0 244 60-323 18-268 (296)
232 cd07846 STKc_CDKL2_3 Catalytic 100.0 6.6E-41 1.4E-45 296.7 18.7 254 61-323 1-282 (286)
233 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-40 2.6E-45 301.4 20.7 252 61-324 1-266 (331)
234 cd06642 STKc_STK25-YSK1 Cataly 100.0 9.1E-41 2E-45 294.6 19.4 241 62-323 5-252 (277)
235 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.5E-40 5.4E-45 291.0 22.1 251 63-328 1-272 (273)
236 cd08217 STKc_Nek2 Catalytic do 100.0 2.4E-40 5.3E-45 289.2 21.9 247 62-323 1-261 (265)
237 KOG0032 Ca2+/calmodulin-depend 100.0 1.6E-40 3.6E-45 300.9 21.3 249 58-323 32-292 (382)
238 KOG1024 Receptor-like protein 100.0 1.7E-41 3.7E-46 293.2 14.2 259 54-328 277-555 (563)
239 cd05609 STKc_MAST Catalytic do 100.0 2.2E-40 4.8E-45 296.3 21.9 250 61-327 1-273 (305)
240 PTZ00266 NIMA-related protein 100.0 5.8E-41 1.3E-45 329.2 19.5 256 57-323 9-294 (1021)
241 cd07839 STKc_CDK5 Catalytic do 100.0 1.6E-40 3.5E-45 294.0 20.4 253 62-323 1-280 (284)
242 cd05044 PTKc_c-ros Catalytic d 100.0 1.7E-40 3.8E-45 291.4 20.4 245 67-327 1-269 (269)
243 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.4E-41 2E-45 301.6 19.1 232 67-318 1-248 (327)
244 cd06609 STKc_MST3_like Catalyt 100.0 2.5E-40 5.3E-45 291.4 21.3 243 61-323 1-250 (274)
245 cd05630 STKc_GRK6 Catalytic do 100.0 1.1E-40 2.3E-45 295.6 19.1 247 63-323 2-260 (285)
246 KOG0200 Fibroblast/platelet-de 100.0 6.2E-41 1.3E-45 323.4 19.0 259 55-329 290-580 (609)
247 cd05046 PTK_CCK4 Pseudokinase 100.0 3.1E-40 6.8E-45 290.8 21.5 252 61-327 5-275 (275)
248 cd06656 STKc_PAK3 Catalytic do 100.0 1.6E-40 3.5E-45 296.1 19.8 244 60-323 18-268 (297)
249 cd06611 STKc_SLK_like Catalyti 100.0 1.3E-40 2.7E-45 294.1 18.8 250 60-324 4-262 (280)
250 cd06607 STKc_TAO Catalytic dom 100.0 6.8E-40 1.5E-44 293.4 23.2 248 61-323 15-266 (307)
251 cd06640 STKc_MST4 Catalytic do 100.0 5.9E-40 1.3E-44 289.5 22.5 242 62-324 5-253 (277)
252 PHA03209 serine/threonine kina 100.0 2.8E-40 6.2E-45 301.9 21.1 187 59-263 64-256 (357)
253 cd06639 STKc_myosinIIIB Cataly 100.0 2.6E-40 5.6E-45 293.8 20.1 259 52-323 13-286 (291)
254 cd07868 STKc_CDK8 Catalytic do 100.0 3E-40 6.5E-45 297.0 20.5 190 66-265 6-218 (317)
255 KOG0667 Dual-specificity tyros 100.0 5.4E-41 1.2E-45 308.1 15.9 200 62-273 187-398 (586)
256 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2E-40 4.4E-45 293.5 18.8 254 60-324 4-266 (284)
257 cd06626 STKc_MEKK4 Catalytic d 100.0 8.7E-40 1.9E-44 285.9 22.5 249 62-323 1-260 (264)
258 cd05574 STKc_phototropin_like 100.0 6.1E-40 1.3E-44 294.8 22.0 247 61-323 1-288 (316)
259 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.2E-40 9.1E-45 291.7 20.6 253 61-323 1-261 (286)
260 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.3E-40 9.3E-45 291.0 20.5 251 61-323 1-260 (283)
261 cd06624 STKc_ASK Catalytic dom 100.0 5.4E-40 1.2E-44 288.3 21.0 253 57-323 4-264 (268)
262 cd06608 STKc_myosinIII_like Ca 100.0 4.5E-40 9.7E-45 289.2 20.4 253 58-323 3-271 (275)
263 cd05623 STKc_MRCK_alpha Cataly 100.0 2.3E-40 5.1E-45 299.6 18.9 252 61-324 1-266 (332)
264 cd05586 STKc_Sck1_like Catalyt 100.0 6.8E-41 1.5E-45 302.9 15.3 237 69-323 1-252 (330)
265 cd06652 STKc_MEKK2 Catalytic d 100.0 1.5E-39 3.3E-44 285.0 23.3 244 61-323 2-260 (265)
266 cd08225 STKc_Nek5 Catalytic do 100.0 7E-40 1.5E-44 285.4 21.0 245 62-323 1-253 (257)
267 KOG4279 Serine/threonine prote 100.0 4.2E-41 9.2E-46 308.5 13.8 243 67-323 581-831 (1226)
268 cd06651 STKc_MEKK3 Catalytic d 100.0 1.3E-39 2.8E-44 285.7 22.6 244 61-323 2-260 (266)
269 cd07843 STKc_CDC2L1 Catalytic 100.0 6.1E-40 1.3E-44 291.7 20.7 254 61-323 5-289 (293)
270 cd07841 STKc_CDK7 Catalytic do 100.0 1E-39 2.2E-44 290.9 22.0 254 62-324 1-282 (298)
271 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.7E-39 3.8E-44 285.6 23.2 250 62-323 2-268 (272)
272 PTZ00284 protein kinase; Provi 100.0 3.2E-40 6.9E-45 311.8 19.6 254 56-323 124-437 (467)
273 smart00219 TyrKc Tyrosine kina 100.0 1.4E-39 3.1E-44 283.3 22.2 245 63-325 1-258 (258)
274 KOG0596 Dual specificity; seri 100.0 3.9E-41 8.5E-46 302.1 12.5 250 58-323 358-626 (677)
275 cd07860 STKc_CDK2_3 Catalytic 100.0 9.3E-40 2E-44 289.1 20.9 253 62-323 1-280 (284)
276 cd06632 STKc_MEKK1_plant Catal 100.0 2.1E-39 4.5E-44 282.5 22.7 245 62-323 1-254 (258)
277 KOG2052 Activin A type IB rece 100.0 7.2E-40 1.6E-44 287.3 19.5 260 61-329 211-504 (513)
278 cd05624 STKc_MRCK_beta Catalyt 100.0 3.5E-40 7.6E-45 298.4 18.1 251 61-323 1-265 (331)
279 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.9E-40 1.7E-44 289.3 20.0 256 52-323 7-278 (282)
280 cd07832 STKc_CCRK Catalytic do 100.0 1.6E-39 3.4E-44 287.7 22.0 253 62-323 1-281 (286)
281 PHA03207 serine/threonine kina 100.0 8.2E-40 1.8E-44 302.4 20.4 247 60-324 91-375 (392)
282 cd06658 STKc_PAK5 Catalytic do 100.0 5.3E-40 1.1E-44 292.1 18.4 241 64-324 25-272 (292)
283 PHA03211 serine/threonine kina 100.0 2.4E-39 5.2E-44 302.7 23.6 246 61-324 169-455 (461)
284 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.1E-39 2.4E-44 289.2 20.4 253 61-323 1-265 (287)
285 cd06635 STKc_TAO1 Catalytic do 100.0 4E-39 8.7E-44 289.7 24.3 250 62-326 26-279 (317)
286 cd05580 STKc_PKA Catalytic dom 100.0 1.3E-39 2.8E-44 289.2 20.8 242 61-322 1-252 (290)
287 cd06659 STKc_PAK6 Catalytic do 100.0 9.1E-40 2E-44 291.3 19.5 241 63-323 23-270 (297)
288 cd07833 STKc_CDKL Catalytic do 100.0 9.5E-40 2.1E-44 289.4 19.3 254 61-323 1-284 (288)
289 cd07844 STKc_PCTAIRE_like Cata 100.0 4.3E-39 9.3E-44 285.9 23.1 254 60-323 4-287 (291)
290 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.7E-39 5.8E-44 283.2 21.5 251 61-323 1-263 (267)
291 cd06641 STKc_MST3 Catalytic do 100.0 4.1E-39 8.8E-44 284.2 22.7 242 62-324 5-253 (277)
292 cd07867 STKc_CDC2L6 Catalytic 100.0 1.8E-39 4E-44 291.8 20.8 190 66-265 6-218 (317)
293 cd07837 STKc_CdkB_plant Cataly 100.0 2.2E-39 4.8E-44 288.2 21.0 257 61-323 1-290 (295)
294 KOG4717 Serine/threonine prote 100.0 3.9E-40 8.5E-45 293.5 15.8 245 61-323 18-269 (864)
295 cd07835 STKc_CDK1_like Catalyt 100.0 3.3E-39 7.2E-44 285.4 21.7 253 63-323 1-279 (283)
296 cd06647 STKc_PAK_I Catalytic d 100.0 1.9E-39 4.2E-44 288.7 20.1 245 60-324 18-269 (293)
297 cd08530 STKc_CNK2-like Catalyt 100.0 2.2E-39 4.7E-44 282.0 20.0 247 62-323 1-252 (256)
298 cd06917 STKc_NAK1_like Catalyt 100.0 3.3E-39 7.3E-44 284.5 21.4 243 62-323 2-254 (277)
299 cd06630 STKc_MEKK1 Catalytic d 100.0 2.5E-39 5.4E-44 283.8 20.2 247 62-323 1-263 (268)
300 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.2E-39 1.1E-43 285.5 22.2 254 60-323 4-287 (291)
301 cd05578 STKc_Yank1 Catalytic d 100.0 1E-39 2.2E-44 284.9 17.3 241 62-322 1-253 (258)
302 cd07845 STKc_CDK10 Catalytic d 100.0 5.3E-39 1.1E-43 287.9 22.3 256 59-323 5-289 (309)
303 cd07864 STKc_CDK12 Catalytic d 100.0 4.3E-39 9.3E-44 287.3 21.3 257 58-323 4-298 (302)
304 cd06605 PKc_MAPKK Catalytic do 100.0 1.5E-39 3.2E-44 284.8 17.8 245 61-323 1-256 (265)
305 cd06623 PKc_MAPKK_plant_like C 100.0 7.1E-39 1.5E-43 280.0 22.1 244 61-324 1-256 (264)
306 cd06616 PKc_MKK4 Catalytic dom 100.0 1.7E-39 3.7E-44 288.0 18.1 256 61-324 4-267 (288)
307 KOG4645 MAPKKK (MAP kinase kin 100.0 4.7E-41 1E-45 326.2 8.4 248 62-324 1236-1494(1509)
308 cd08226 PK_STRAD_beta Pseudoki 100.0 5.9E-39 1.3E-43 290.0 21.6 250 68-323 5-307 (328)
309 cd07850 STKc_JNK Catalytic dom 100.0 6.2E-39 1.3E-43 292.8 21.9 252 59-323 14-310 (353)
310 cd06648 STKc_PAK_II Catalytic 100.0 7.6E-39 1.6E-43 283.7 21.5 242 62-323 20-268 (285)
311 PHA02882 putative serine/threo 100.0 6.1E-39 1.3E-43 285.5 20.8 255 58-326 9-294 (294)
312 PLN00009 cyclin-dependent kina 100.0 7.9E-39 1.7E-43 284.7 21.3 255 61-323 2-283 (294)
313 cd07865 STKc_CDK9 Catalytic do 100.0 8.3E-39 1.8E-43 286.4 21.6 255 60-323 11-306 (310)
314 cd08215 STKc_Nek Catalytic dom 100.0 1.2E-38 2.6E-43 277.2 21.5 247 62-323 1-254 (258)
315 cd06614 STKc_PAK Catalytic dom 100.0 1.5E-38 3.2E-43 281.9 22.0 247 58-323 16-269 (286)
316 cd07840 STKc_CDK9_like Catalyt 100.0 7.6E-39 1.7E-43 283.3 20.1 252 63-323 1-283 (287)
317 cd05611 STKc_Rim15_like Cataly 100.0 9.3E-39 2E-43 279.1 20.3 243 67-325 2-249 (260)
318 cd06634 STKc_TAO2 Catalytic do 100.0 1.5E-38 3.4E-43 284.8 22.0 248 62-324 16-267 (308)
319 cd05572 STKc_cGK_PKG Catalytic 100.0 1.4E-38 3E-43 278.3 20.9 237 69-323 1-251 (262)
320 cd07831 STKc_MOK Catalytic dom 100.0 1.9E-38 4.1E-43 280.3 21.7 250 63-323 1-278 (282)
321 cd07842 STKc_CDK8_like Catalyt 100.0 1.6E-38 3.4E-43 285.4 21.2 256 62-323 1-312 (316)
322 cd07849 STKc_ERK1_2_like Catal 100.0 1.9E-38 4.1E-43 287.7 21.5 253 60-324 4-292 (336)
323 cd08216 PK_STRAD Pseudokinase 100.0 1.6E-38 3.5E-43 285.3 20.7 250 67-323 8-294 (314)
324 cd06633 STKc_TAO3 Catalytic do 100.0 5E-38 1.1E-42 282.2 23.8 246 63-323 23-272 (313)
325 cd05633 STKc_GRK3 Catalytic do 100.0 1.4E-38 3.1E-43 281.1 20.0 240 68-323 1-254 (279)
326 KOG0610 Putative serine/threon 100.0 7.6E-39 1.6E-43 278.8 17.7 247 60-322 76-390 (459)
327 cd07838 STKc_CDK4_6_like Catal 100.0 4.3E-38 9.3E-43 278.6 22.4 252 63-323 1-283 (287)
328 cd07836 STKc_Pho85 Catalytic d 100.0 2.3E-38 5.1E-43 280.0 20.6 254 62-323 1-280 (284)
329 cd06627 STKc_Cdc7_like Catalyt 100.0 4.2E-38 9E-43 273.5 21.6 243 62-323 1-250 (254)
330 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-38 2.3E-43 289.0 18.5 253 61-323 5-293 (334)
331 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-38 2.3E-43 289.4 18.4 255 60-324 4-291 (337)
332 KOG0586 Serine/threonine prote 100.0 2.7E-39 5.8E-44 294.4 14.3 247 58-323 53-305 (596)
333 KOG1035 eIF-2alpha kinase GCN2 100.0 2.9E-39 6.4E-44 312.2 15.3 248 58-323 476-870 (1351)
334 cd07852 STKc_MAPK15 Catalytic 100.0 1.8E-38 3.9E-43 287.9 19.6 254 60-324 6-295 (337)
335 cd06606 STKc_MAPKKK Catalytic 100.0 3.7E-38 8.1E-43 274.1 20.6 244 62-323 1-256 (260)
336 cd05579 STKc_MAST_like Catalyt 100.0 1.7E-38 3.6E-43 277.6 18.4 240 69-326 1-256 (265)
337 cd06653 STKc_MEKK3_like_1 Cata 100.0 1E-37 2.2E-42 273.3 23.0 244 61-323 2-260 (264)
338 cd05122 PKc_STE Catalytic doma 100.0 9.1E-38 2E-42 270.6 22.4 244 62-323 1-250 (253)
339 cd05577 STKc_GRK Catalytic dom 100.0 4.7E-38 1E-42 277.4 20.8 241 69-323 1-253 (277)
340 cd06657 STKc_PAK4 Catalytic do 100.0 3.7E-38 8.1E-43 280.2 20.2 238 66-323 25-269 (292)
341 KOG0584 Serine/threonine prote 100.0 2.7E-39 5.8E-44 294.8 12.9 240 66-323 45-295 (632)
342 cd05118 STKc_CMGC Catalytic do 100.0 6.3E-38 1.4E-42 276.9 20.8 252 63-323 1-279 (283)
343 cd05606 STKc_beta_ARK Catalyti 100.0 1E-37 2.2E-42 275.5 21.6 237 68-323 1-254 (278)
344 cd08222 STKc_Nek11 Catalytic d 100.0 6.8E-38 1.5E-42 273.6 20.0 246 62-323 1-256 (260)
345 PHA03390 pk1 serine/threonine- 100.0 1.6E-37 3.4E-42 272.7 22.4 245 55-323 8-261 (267)
346 cd07879 STKc_p38delta_MAPK13 C 100.0 6.7E-38 1.5E-42 284.7 20.3 253 60-324 14-297 (342)
347 PHA03210 serine/threonine kina 100.0 1.6E-38 3.5E-43 301.8 16.8 258 59-323 146-453 (501)
348 cd05581 STKc_PDK1 Catalytic do 100.0 5E-38 1.1E-42 277.0 18.8 243 61-323 1-276 (280)
349 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.1E-37 2.4E-42 281.6 21.3 256 58-324 7-288 (328)
350 cd07830 STKc_MAK_like Catalyti 100.0 1.8E-37 3.9E-42 274.3 22.0 252 63-323 1-279 (283)
351 cd07877 STKc_p38alpha_MAPK14 C 100.0 6.7E-38 1.5E-42 285.0 19.7 259 54-323 10-299 (345)
352 PTZ00024 cyclin-dependent prot 100.0 1.3E-37 2.8E-42 282.1 21.4 253 61-323 8-312 (335)
353 cd07866 STKc_BUR1 Catalytic do 100.0 1E-37 2.3E-42 279.4 20.3 255 60-323 7-307 (311)
354 KOG0579 Ste20-like serine/thre 100.0 2.1E-39 4.6E-44 294.8 9.2 247 62-323 33-288 (1187)
355 cd06618 PKc_MKK7 Catalytic dom 100.0 1.9E-37 4.1E-42 276.2 21.6 252 58-324 12-273 (296)
356 KOG0574 STE20-like serine/thre 100.0 1.9E-40 4.1E-45 278.2 2.0 242 63-324 35-283 (502)
357 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.1E-37 2.4E-42 283.4 20.2 256 57-323 11-297 (343)
358 cd07834 STKc_MAPK Catalytic do 100.0 1.9E-37 4.2E-42 280.3 21.1 253 62-324 1-289 (330)
359 cd07829 STKc_CDK_like Catalyti 100.0 2.4E-37 5.3E-42 273.1 20.5 252 63-323 1-278 (282)
360 KOG0662 Cyclin-dependent kinas 100.0 5.6E-38 1.2E-42 245.4 14.4 253 62-323 3-282 (292)
361 cd07851 STKc_p38 Catalytic dom 100.0 1.2E-37 2.7E-42 283.1 17.5 254 59-323 13-297 (343)
362 cd07857 STKc_MPK1 Catalytic do 100.0 6.4E-37 1.4E-41 277.2 21.2 252 62-323 1-291 (332)
363 cd05613 STKc_MSK1_N N-terminal 100.0 4.3E-37 9.3E-42 273.0 19.5 248 62-323 1-267 (290)
364 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.2E-37 9.2E-42 279.5 19.2 250 61-323 5-299 (342)
365 cd05583 STKc_MSK_N N-terminal 100.0 4.1E-37 8.9E-42 272.9 18.6 252 62-327 1-266 (288)
366 cd05123 STKc_AGC Catalytic dom 100.0 8.4E-37 1.8E-41 264.9 19.9 232 69-320 1-240 (250)
367 KOG4250 TANK binding protein k 100.0 7.6E-38 1.7E-42 288.7 13.5 260 63-329 15-311 (732)
368 KOG0983 Mitogen-activated prot 100.0 8.2E-38 1.8E-42 259.1 11.5 248 62-323 93-348 (391)
369 KOG0666 Cyclin C-dependent kin 100.0 3E-38 6.5E-43 265.9 7.2 201 59-265 22-242 (438)
370 KOG0986 G protein-coupled rece 100.0 1.9E-37 4.1E-42 272.6 10.4 247 58-318 182-435 (591)
371 cd05610 STKc_MASTL Catalytic d 100.0 7.8E-36 1.7E-40 291.9 21.6 148 60-214 3-152 (669)
372 KOG0612 Rho-associated, coiled 100.0 2.7E-37 5.9E-42 296.7 10.7 255 54-322 68-336 (1317)
373 KOG0671 LAMMER dual specificit 100.0 1.5E-37 3.2E-42 268.3 7.9 257 55-323 83-405 (415)
374 cd05576 STKc_RPK118_like Catal 100.0 4.3E-36 9.3E-41 258.9 16.8 217 72-319 4-224 (237)
375 KOG1006 Mitogen-activated prot 100.0 4.2E-38 9.2E-43 259.7 2.6 254 61-323 64-326 (361)
376 KOG1151 Tousled-like protein k 100.0 5.7E-37 1.2E-41 269.1 8.9 252 61-322 463-739 (775)
377 KOG0690 Serine/threonine prote 100.0 1.1E-36 2.4E-41 257.9 9.6 237 60-316 167-411 (516)
378 KOG0604 MAP kinase-activated p 100.0 1.4E-36 2.9E-41 254.7 9.3 245 60-323 60-321 (400)
379 KOG0603 Ribosomal protein S6 k 100.0 7.6E-36 1.6E-40 273.2 13.9 235 60-323 321-562 (612)
380 KOG4236 Serine/threonine prote 100.0 1.9E-36 4.2E-41 270.6 9.0 239 67-322 570-817 (888)
381 KOG0607 MAP kinase-interacting 100.0 7.9E-36 1.7E-40 252.1 12.1 248 67-323 84-360 (463)
382 KOG0587 Traf2- and Nck-interac 100.0 7.4E-35 1.6E-39 274.0 16.4 255 54-323 12-281 (953)
383 KOG0696 Serine/threonine prote 100.0 3.4E-35 7.3E-40 255.9 12.9 239 58-316 346-593 (683)
384 smart00220 S_TKc Serine/Threon 100.0 6.7E-34 1.4E-38 244.7 20.4 233 73-323 1-240 (244)
385 PLN03225 Serine/threonine-prot 100.0 5.8E-34 1.3E-38 272.6 17.6 255 59-323 130-449 (566)
386 KOG0669 Cyclin T-dependent kin 100.0 3.1E-36 6.7E-41 247.1 1.2 255 60-323 16-314 (376)
387 KOG0984 Mitogen-activated prot 100.0 1E-34 2.3E-39 231.5 9.7 218 56-277 41-267 (282)
388 PLN03224 probable serine/threo 100.0 3.1E-33 6.8E-38 261.7 21.1 263 58-323 142-499 (507)
389 KOG0614 cGMP-dependent protein 100.0 4.3E-35 9.3E-40 260.9 5.9 240 60-317 419-665 (732)
390 KOG1027 Serine/threonine prote 100.0 2.3E-34 5.1E-39 269.4 8.0 240 62-323 510-766 (903)
391 KOG0608 Warts/lats-like serine 100.0 2.4E-33 5.3E-38 255.4 10.0 202 60-271 628-879 (1034)
392 KOG0664 Nemo-like MAPK-related 100.0 5.5E-34 1.2E-38 236.5 3.6 252 63-324 55-343 (449)
393 KOG0695 Serine/threonine prote 100.0 1.2E-32 2.7E-37 234.4 9.5 237 60-316 249-502 (593)
394 KOG0576 Mitogen-activated prot 100.0 1.2E-32 2.6E-37 252.2 8.2 251 59-323 13-270 (829)
395 KOG0668 Casein kinase II, alph 100.0 9E-32 1.9E-36 218.0 9.7 246 59-323 36-321 (338)
396 KOG1152 Signal transduction se 100.0 6.2E-32 1.3E-36 244.1 9.2 196 60-264 560-770 (772)
397 cd00180 PKc Catalytic domain o 100.0 4.8E-30 1E-34 215.4 19.8 206 69-324 1-214 (215)
398 KOG0665 Jun-N-terminal kinase 100.0 4.7E-31 1E-35 223.3 11.7 250 60-323 16-309 (369)
399 smart00221 STYKc Protein kinas 100.0 8.5E-29 1.8E-33 210.8 19.4 194 63-265 1-202 (225)
400 KOG0670 U4/U6-associated splic 100.0 1.4E-30 3E-35 232.8 7.8 258 55-323 426-745 (752)
401 KOG1290 Serine/threonine prote 100.0 2.5E-29 5.5E-34 223.3 15.1 131 61-199 78-221 (590)
402 KOG1345 Serine/threonine kinas 100.0 6E-30 1.3E-34 212.2 7.8 254 59-325 22-285 (378)
403 KOG0195 Integrin-linked kinase 100.0 1.3E-29 2.8E-34 210.5 7.9 250 66-329 195-447 (448)
404 PLN00181 protein SPA1-RELATED; 100.0 5.8E-29 1.3E-33 248.9 11.9 188 115-323 28-264 (793)
405 smart00750 KIND kinase non-cat 100.0 3.5E-28 7.6E-33 199.9 13.9 166 144-329 1-170 (176)
406 KOG1167 Serine/threonine prote 99.9 5.7E-28 1.2E-32 211.6 10.1 192 58-265 33-280 (418)
407 PRK09188 serine/threonine prot 99.9 1.2E-25 2.5E-30 202.5 13.6 178 52-247 9-210 (365)
408 KOG1164 Casein kinase (serine/ 99.9 1.8E-23 3.9E-28 188.2 19.6 252 62-329 19-298 (322)
409 COG0515 SPS1 Serine/threonine 99.9 2E-22 4.2E-27 180.3 22.5 254 63-323 2-274 (384)
410 cd05147 RIO1_euk RIO kinase fa 99.9 3.4E-23 7.3E-28 171.8 12.0 140 67-216 3-167 (190)
411 KOG1023 Natriuretic peptide re 99.9 9.4E-23 2E-27 187.2 12.9 210 113-330 1-226 (484)
412 KOG1163 Casein kinase (serine/ 99.9 2.1E-22 4.6E-27 164.9 11.9 249 59-326 13-282 (341)
413 cd05145 RIO1_like RIO kinase f 99.9 3.4E-22 7.4E-27 166.2 13.5 141 66-217 2-168 (190)
414 KOG0590 Checkpoint kinase and 99.9 1.9E-23 4.2E-28 199.9 5.4 246 64-323 321-584 (601)
415 PRK10359 lipopolysaccharide co 99.9 1.2E-22 2.7E-27 170.7 8.4 174 58-257 28-216 (232)
416 KOG1165 Casein kinase (serine/ 99.9 7E-21 1.5E-25 162.7 14.9 195 60-268 27-241 (449)
417 PRK12274 serine/threonine prot 99.8 3E-20 6.4E-25 153.2 14.2 181 64-265 5-209 (218)
418 PRK10345 hypothetical protein; 99.8 3E-20 6.5E-25 155.7 12.5 135 63-211 4-154 (210)
419 KOG0603 Ribosomal protein S6 k 99.8 1.7E-21 3.7E-26 179.3 4.3 225 68-318 1-232 (612)
420 KOG1240 Protein kinase contain 99.8 5.7E-21 1.2E-25 184.6 7.9 246 62-328 24-295 (1431)
421 KOG4158 BRPK/PTEN-induced prot 99.8 3.2E-20 7E-25 162.2 11.1 192 117-326 274-512 (598)
422 smart00090 RIO RIO-like kinase 99.8 2.2E-19 4.8E-24 153.9 11.5 143 62-216 29-198 (237)
423 PF14531 Kinase-like: Kinase-l 99.8 2.1E-19 4.5E-24 155.7 11.1 235 63-315 14-288 (288)
424 KOG1166 Mitotic checkpoint ser 99.8 7.1E-19 1.5E-23 172.5 13.5 249 52-330 689-955 (974)
425 PRK14879 serine/threonine prot 99.8 1.1E-18 2.3E-23 147.7 12.5 136 67-215 2-143 (211)
426 cd05144 RIO2_C RIO kinase fami 99.8 2.6E-18 5.6E-23 143.9 12.7 139 61-216 15-175 (198)
427 PRK09605 bifunctional UGMP fam 99.8 3.3E-18 7.1E-23 164.1 14.9 140 60-216 332-477 (535)
428 TIGR03724 arch_bud32 Kae1-asso 99.8 4E-18 8.6E-23 142.9 11.6 133 68-216 1-139 (199)
429 KOG0606 Microtubule-associated 99.7 2.3E-18 5E-23 166.5 8.6 199 60-316 82-304 (1205)
430 cd05119 RIO RIO kinase family, 99.7 8.1E-17 1.8E-21 133.5 11.6 138 66-217 2-165 (187)
431 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.2E-17 2.5E-22 151.4 5.4 166 133-320 330-508 (516)
432 cd05120 APH_ChoK_like Aminogly 99.7 3.6E-16 7.8E-21 124.4 11.9 135 65-215 2-138 (155)
433 PRK01723 3-deoxy-D-manno-octul 99.7 1.6E-15 3.4E-20 130.4 13.1 138 66-216 36-192 (239)
434 KOG0590 Checkpoint kinase and 99.6 2.3E-17 5E-22 158.3 0.7 248 60-322 19-284 (601)
435 KOG1266 Protein kinase [Signal 99.6 5.5E-15 1.2E-19 126.8 6.7 195 112-323 120-330 (458)
436 TIGR01982 UbiB 2-polyprenylphe 99.5 3.6E-14 7.9E-19 132.2 10.5 147 62-218 119-309 (437)
437 KOG0601 Cyclin-dependent kinas 99.5 2.8E-14 6E-19 131.8 9.4 240 62-322 115-377 (524)
438 PRK04750 ubiB putative ubiquin 99.5 2.1E-13 4.5E-18 128.8 9.1 147 60-217 119-315 (537)
439 KOG1243 Protein kinase [Genera 99.4 5.7E-12 1.2E-16 118.0 14.1 160 82-259 34-199 (690)
440 cd05151 ChoK Choline Kinase (C 99.4 4.4E-12 9.5E-17 103.3 9.9 130 66-214 3-135 (170)
441 KOG0601 Cyclin-dependent kinas 99.3 1.2E-12 2.6E-17 121.1 6.4 246 58-325 262-515 (524)
442 cd05146 RIO3_euk RIO kinase fa 99.3 2.8E-11 6E-16 99.9 11.7 137 67-216 3-174 (197)
443 cd05154 ACAD10_11_like Acyl-Co 99.2 1.9E-10 4E-15 97.7 13.3 143 67-215 4-206 (223)
444 COG3642 Mn2+-dependent serine/ 99.2 4.7E-10 1E-14 89.9 11.2 133 67-216 2-141 (204)
445 KOG0606 Microtubule-associated 99.1 4.4E-11 9.5E-16 116.8 5.0 246 57-319 800-1084(1205)
446 KOG3087 Serine/threonine prote 99.1 1.5E-09 3.2E-14 86.7 11.5 146 65-216 11-166 (229)
447 KOG3741 Poly(A) ribonuclease s 99.0 5.5E-08 1.2E-12 89.2 18.4 169 74-261 289-474 (655)
448 PF01163 RIO1: RIO1 family; I 98.9 5.2E-09 1.1E-13 86.0 9.7 127 76-216 1-156 (188)
449 PRK15123 lipopolysaccharide co 98.9 2.8E-08 6.1E-13 86.5 13.2 142 68-215 29-194 (268)
450 COG0478 RIO-like serine/threon 98.8 4.2E-08 9E-13 83.5 9.3 135 63-213 93-249 (304)
451 KOG2137 Protein kinase [Signal 98.7 3.8E-09 8.3E-14 99.7 1.1 143 170-323 106-264 (700)
452 COG0661 AarF Predicted unusual 98.7 5.8E-08 1.3E-12 91.6 8.9 148 59-217 124-316 (517)
453 COG4248 Uncharacterized protei 98.7 2.1E-07 4.5E-12 83.6 11.5 256 64-329 14-301 (637)
454 PF06293 Kdo: Lipopolysacchari 98.6 6E-07 1.3E-11 75.5 11.2 104 105-215 57-170 (206)
455 PRK09902 hypothetical protein; 98.6 2E-06 4.4E-11 71.4 13.6 139 69-214 26-178 (216)
456 KOG1235 Predicted unusual prot 98.5 8.9E-07 1.9E-11 83.4 9.6 147 61-218 162-357 (538)
457 PF06176 WaaY: Lipopolysacchar 98.4 1.8E-06 3.9E-11 72.0 9.0 141 58-215 28-183 (229)
458 COG1718 RIO1 Serine/threonine 98.3 4.7E-06 1E-10 70.4 10.0 152 54-217 38-217 (268)
459 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 1E-05 2.2E-10 69.0 12.3 141 66-214 6-181 (226)
460 PF10707 YrbL-PhoP_reg: PhoP r 98.2 5.7E-05 1.2E-09 62.7 12.9 136 64-213 4-170 (199)
461 KOG0576 Mitogen-activated prot 98.1 4.4E-07 9.6E-12 85.3 -1.6 183 59-263 240-430 (829)
462 cd05150 APH Aminoglycoside 3'- 98.1 8.5E-05 1.8E-09 64.1 12.7 76 68-149 5-82 (244)
463 COG2112 Predicted Ser/Thr prot 98.0 4.5E-05 9.7E-10 61.2 8.3 127 65-215 26-155 (201)
464 PF01636 APH: Phosphotransfera 98.0 4.6E-05 1E-09 64.9 9.1 78 66-148 2-84 (239)
465 PLN02876 acyl-CoA dehydrogenas 97.9 0.00014 3.1E-09 73.7 13.5 79 66-145 43-130 (822)
466 PF12260 PIP49_C: Protein-kina 97.9 4.6E-05 1E-09 62.9 8.2 100 107-214 7-110 (188)
467 PF13095 FTA2: Kinetochore Sim 97.9 0.00026 5.7E-09 58.5 11.7 128 60-213 36-206 (207)
468 PRK10593 hypothetical protein; 97.6 0.0012 2.6E-08 58.8 13.0 79 63-146 16-100 (297)
469 KOG1035 eIF-2alpha kinase GCN2 97.6 0.00025 5.5E-09 71.6 9.4 190 107-324 230-434 (1351)
470 cd05157 ETNK_euk Ethanolamine 97.6 0.0015 3.2E-08 55.9 12.3 73 67-146 4-79 (235)
471 cd05155 APH_ChoK_like_1 Unchar 97.5 0.00078 1.7E-08 57.8 9.8 31 184-214 163-193 (235)
472 PRK09550 mtnK methylthioribose 97.5 0.0019 4E-08 59.6 12.1 77 66-144 31-116 (401)
473 TIGR02721 ycfN_thiK thiamine k 97.4 0.0015 3.3E-08 56.7 10.9 138 69-214 4-174 (256)
474 KOG2270 Serine/threonine prote 97.2 0.0025 5.3E-08 57.3 9.4 138 67-214 150-312 (520)
475 cd05156 ChoK_euk Choline Kinas 97.0 0.0092 2E-07 53.2 11.4 74 67-147 4-85 (302)
476 PRK05231 homoserine kinase; Pr 97.0 0.018 3.8E-07 51.8 12.9 32 183-214 185-216 (319)
477 TIGR00938 thrB_alt homoserine 97.0 0.016 3.5E-07 51.8 12.4 144 66-214 27-216 (307)
478 cd05153 HomoserineK_II Homoser 97.0 0.012 2.6E-07 52.2 11.5 144 65-214 18-204 (296)
479 KOG2268 Serine/threonine prote 96.8 0.0019 4.2E-08 57.0 4.8 134 62-212 93-248 (465)
480 KOG1826 Ras GTPase activating 96.7 0.00038 8.2E-09 72.3 -0.1 155 108-265 1278-1442(2724)
481 KOG1093 Predicted protein kina 96.6 0.0034 7.4E-08 58.7 5.3 161 105-321 28-191 (725)
482 PLN02756 S-methyl-5-thioribose 96.5 0.077 1.7E-06 49.1 13.2 76 65-143 36-119 (418)
483 PF03881 Fructosamin_kin: Fruc 96.5 0.021 4.4E-07 50.5 9.1 76 63-144 19-97 (288)
484 COG3173 Predicted aminoglycosi 96.3 0.059 1.3E-06 48.1 11.2 32 185-216 198-229 (321)
485 PLN02236 choline kinase 96.2 0.081 1.8E-06 48.1 12.0 142 67-215 42-231 (344)
486 TIGR01767 MTRK 5-methylthiorib 96.2 0.086 1.9E-06 47.9 11.4 74 68-143 2-84 (370)
487 cd05152 MPH2' Macrolide 2'-Pho 95.9 0.089 1.9E-06 46.3 10.2 31 185-215 185-216 (276)
488 PF07387 Seadorna_VP7: Seadorn 95.8 0.12 2.6E-06 43.5 9.6 152 72-259 73-224 (308)
489 COG2334 Putative homoserine ki 95.5 0.28 6E-06 44.2 11.8 141 68-214 33-227 (331)
490 PLN02421 phosphotransferase, a 95.2 0.33 7.2E-06 43.9 11.8 73 67-146 20-97 (330)
491 COG5072 ALK1 Serine/threonine 95.2 0.081 1.8E-06 47.8 7.2 55 160-217 318-372 (488)
492 PRK06148 hypothetical protein; 94.4 0.51 1.1E-05 49.3 12.1 32 183-214 201-235 (1013)
493 PF01102 Glycophorin_A: Glycop 94.3 0.077 1.7E-06 40.0 4.3 31 6-36 65-95 (122)
494 COG3001 Uncharacterized protei 94.3 0.42 9.2E-06 40.5 9.0 76 66-147 21-99 (286)
495 PRK12396 5-methylribose kinase 93.8 0.47 1E-05 43.8 9.2 76 66-143 34-117 (409)
496 PRK11768 serine/threonine prot 93.2 2.6 5.7E-05 38.0 13.1 71 72-145 36-113 (325)
497 PF03109 ABC1: ABC1 family; I 92.5 0.032 6.8E-07 42.3 -0.3 36 61-97 12-47 (119)
498 PTZ00384 choline kinase; Provi 92.1 1.2 2.7E-05 41.1 9.5 75 66-147 55-137 (383)
499 KOG1033 eIF-2alpha kinase PEK/ 90.4 0.056 1.2E-06 50.5 -1.0 73 56-129 44-117 (516)
500 PRK10271 thiK thiamine kinase; 90.3 0.27 5.7E-06 40.4 2.9 30 185-215 77-106 (188)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-56 Score=404.90 Aligned_cols=276 Identities=42% Similarity=0.725 Sum_probs=244.6
Q ss_pred cccCCChHHHHHhcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceee
Q 020027 47 CAFAYPLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILG 126 (332)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 126 (332)
....|++.++..+|++|+..+.||+|+||.||+|.+++|..||||++....... ..+|.+|+.++++++|||+|+++|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEE
Confidence 345678999999999999999999999999999999999999999887654332 345899999999999999999999
Q ss_pred eeecCC-ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCce
Q 020027 127 FSQAPG-ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCA 205 (332)
Q Consensus 127 ~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 205 (332)
||.+.+ ..+||+||+++|+|.+.+...... .++|.++++|+.++|+||+|||..+.+.|+|||||++|||+|+++++
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 999988 599999999999999999875432 58999999999999999999999988899999999999999999999
Q ss_pred EEccCCccccCCc-cc------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCc-------hhHHHH
Q 020027 206 RVCDYGLSFLAPE-EK------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG-------LLVKWA 271 (332)
Q Consensus 206 kl~dfg~a~~~~~-~~------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~-------~~~~~~ 271 (332)
||+|||+|+..+. .. .||.+|++||+... +..+.|+||||||++|.|++||+++... ...+|.
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~---g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~ 293 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAST---GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWA 293 (361)
T ss_pred EccCccCcccCCccccceeeecCCCCccCChhhhcc---CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHH
Confidence 9999999987764 22 68999999999987 7899999999999999999999987652 256777
Q ss_pred HHHhhhcccccccCCcCC-CCCCh-HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 272 LPLIKEMRFSELLDPRLA-IPCEI-KPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
...+.++.+.+++|+++. ...+. ++..++..++.+|++.+|.+||+|.||++.|+.+.
T Consensus 294 ~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 294 KPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 788888889999999987 55554 67888999999999999999999999999997765
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-53 Score=380.63 Aligned_cols=261 Identities=30% Similarity=0.400 Sum_probs=214.6
Q ss_pred HHHhcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC-ce
Q 020027 56 IDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-ER 134 (332)
Q Consensus 56 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~ 134 (332)
.....+++...+.+|+|+||+||+|.+.....||+|.+............|.+|+.+|++++|||||+++|+|..+. ..
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~ 115 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSL 115 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCce
Confidence 33444455566679999999999999854444999999876554444557899999999999999999999999887 79
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCC-eeecCCCCCCEEeCCCC-ceEEccCCc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN-IIHGCIKASNILLNEKF-CARVCDYGL 212 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~-ivH~dlk~~Nill~~~~-~~kl~dfg~ 212 (332)
+|||||+++|+|.+++... ....+++..++.++.|||.||.|||++ + ||||||||+|+|++.++ ++||+|||+
T Consensus 116 ~iVtEy~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGl 190 (362)
T KOG0192|consen 116 CIVTEYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGL 190 (362)
T ss_pred EEEEEeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCcc
Confidence 9999999999999999874 122389999999999999999999998 7 99999999999999997 999999999
Q ss_pred cccCCcc------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCC
Q 020027 213 SFLAPEE------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDP 286 (332)
Q Consensus 213 a~~~~~~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 286 (332)
++..... ..||..|||||.+... ...++.|+||||||+++|||+||+.||.+.........+.... .
T Consensus 191 sr~~~~~~~~~~~~~GT~~wMAPEv~~~~-~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~------~ 263 (362)
T KOG0192|consen 191 SREKVISKTSMTSVAGTYRWMAPEVLRGE-KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGG------L 263 (362)
T ss_pred ceeeccccccccCCCCCccccChhhhcCC-CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC------C
Confidence 9765532 3789999999999853 3689999999999999999999999999876644333332221 1
Q ss_pred cCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 287 RLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 287 ~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
++..+ ..+...+..+|.+||+.||+.||+|.+++..|+.+..
T Consensus 264 Rp~~p--~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 264 RPPIP--KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred CCCCC--ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 11222 2245578899999999999999999999999997653
No 3
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-53 Score=382.79 Aligned_cols=252 Identities=24% Similarity=0.390 Sum_probs=219.6
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
...+.+...+.||+|.||.||.|.+.....||+|.++.... ...+|.+|+++|++|+|+|||+++|+|..++.++||
T Consensus 203 i~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m---~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIV 279 (468)
T KOG0197|consen 203 IPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM---SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIV 279 (468)
T ss_pred ecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecccc---ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEE
Confidence 33344555688999999999999997777999999986532 233578999999999999999999999999899999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
||||+.|+|.+|++... ...+...+.+.++.|||+||+||.++ ++|||||.++|||++++..+||+|||+|+...
T Consensus 280 tE~m~~GsLl~yLr~~~--~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTRE--GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred EEecccCcHHHHhhhcC--CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccC
Confidence 99999999999998732 23478899999999999999999999 99999999999999999999999999999644
Q ss_pred ccc-------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 218 EEK-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 218 ~~~-------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
++. .-...|.|||.+.. +.++.|||||||||+|||++| |+.||.+....++...+..+ ++
T Consensus 355 d~~Y~~~~~~kfPIkWtAPEa~~~---~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G---------yR 422 (468)
T KOG0197|consen 355 DDEYTASEGGKFPIKWTAPEALNY---GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG---------YR 422 (468)
T ss_pred CCceeecCCCCCCceecCHHHHhh---CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc---------Cc
Confidence 332 23568999999987 789999999999999999999 99999998888777766664 56
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 290 IPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 290 ~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
.+.+..|+.+++++|..||..+|++||||+.+...|+.+.
T Consensus 423 lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 423 LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 7777788889999999999999999999999999888765
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.8e-52 Score=360.16 Aligned_cols=252 Identities=25% Similarity=0.268 Sum_probs=213.0
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccc-----cccHHHHHHHhccCCCCCccceeeeeecCC
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA-----GFGFASVIKTLSLAQHPNIVPILGFSQAPG 132 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 132 (332)
..+.|...+.||+|+||.|-+|. .++|+.||||+++++...... .....+|+++|++++|||||++++++..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 45667888999999999999998 779999999999876654321 223579999999999999999999999999
Q ss_pred ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC---CceEEcc
Q 020027 133 ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK---FCARVCD 209 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~d 209 (332)
..|+||||++||+|.+++-.+.. +.+.....++.|++.|+.|||++ ||+||||||+|||+..+ ..+||+|
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~----l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY----LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc----cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecc
Confidence 99999999999999999987654 66677788999999999999999 99999999999999766 7899999
Q ss_pred CCccccCCccc-----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHH-HHHHhhhcccccc
Q 020027 210 YGLSFLAPEEK-----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKW-ALPLIKEMRFSEL 283 (332)
Q Consensus 210 fg~a~~~~~~~-----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~ 283 (332)
||+|+..++.. +||+.|.|||.+...+...+..++|+||+||+||-+++|.+||.+...+. ..+.+..+++.
T Consensus 323 FGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~-- 400 (475)
T KOG0615|consen 323 FGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYA-- 400 (475)
T ss_pred cchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccc--
Confidence 99999886543 89999999999988655555669999999999999999999998875544 44555555432
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 284 LDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+..+...+-.++..+++.++|..||++|||+.|+++
T Consensus 401 ----f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 401 ----FGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred ----ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 223444556678999999999999999999999875
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-51 Score=370.01 Aligned_cols=243 Identities=25% Similarity=0.352 Sum_probs=214.5
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
..|...++||+|||+.||+++. .+|+.||+|++.+..... .......+||++.+.|+|||||+++++|++.+..||+.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5699999999999999999994 899999999998755433 33446789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
|+|++++|..+++.... +++..+..++.||+.||.|||++ +|+|||||..|++++++.++||+|||+|.....
T Consensus 98 ELC~~~sL~el~Krrk~----ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKP----LTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHHhcCC----CCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 99999999999985432 89999999999999999999999 999999999999999999999999999987652
Q ss_pred c------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 E------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
. .+||+.|+|||.+.. ..++..+||||+||++|-|++|++||......+.+..++...+ ..|.
T Consensus 171 ~~Erk~TlCGTPNYIAPEVl~k---~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y--------~~P~ 239 (592)
T KOG0575|consen 171 DGERKKTLCGTPNYIAPEVLNK---SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY--------SMPS 239 (592)
T ss_pred cccccceecCCCcccChhHhcc---CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc--------cccc
Confidence 2 379999999999986 6789999999999999999999999999988999888877542 2222
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
. -..++.+||.++|+.||.+|||+++|+.
T Consensus 240 ~--ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 240 H--LSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred c--cCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 2 2236779999999999999999999985
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-51 Score=354.22 Aligned_cols=247 Identities=23% Similarity=0.276 Sum_probs=205.0
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
..++|...+.||+|+||+||+|+ .+++..||||.+.+.....+.......|+.+++.++|||||++++++..++..++|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 35678889999999999999999 56789999999987754333334568999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC------CceEEccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK------FCARVCDYG 211 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~------~~~kl~dfg 211 (332)
||||.||+|.+|++..+. +++.++..++.|+|.||++||++ +||||||||.|||++.+ ..+||+|||
T Consensus 88 MEyC~gGDLs~yi~~~~~----l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRGR----LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred EEeCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 999999999999987654 89999999999999999999999 99999999999999864 568999999
Q ss_pred ccccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCC
Q 020027 212 LSFLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDP 286 (332)
Q Consensus 212 ~a~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 286 (332)
+|+...+. .+|++-|||||.+.. .+|+.|+|+||.|+++||+++|+.||......+.+.+++.+...
T Consensus 161 fAR~L~~~~~a~tlcGSplYMAPEV~~~---~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~----- 232 (429)
T KOG0595|consen 161 FARFLQPGSMAETLCGSPLYMAPEVIMS---QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI----- 232 (429)
T ss_pred hhhhCCchhHHHHhhCCccccCHHHHHh---ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc-----
Confidence 99988754 379999999999987 78999999999999999999999999988888887766553211
Q ss_pred cCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 020027 287 RLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVA 322 (332)
Q Consensus 287 ~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~ 322 (332)
....+......+.+++...++.+|.+|-++.+..
T Consensus 233 --~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~ 266 (429)
T KOG0595|consen 233 --VPVLPAELSNPLRELLISLLQRNPKDRISFEDFF 266 (429)
T ss_pred --cCchhhhccCchhhhhhHHHhcCccccCchHHhh
Confidence 1111111111233666667777777777766543
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-52 Score=344.80 Aligned_cols=256 Identities=23% Similarity=0.296 Sum_probs=213.0
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeee-eecCCc-eeEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF-SQAPGE-RIIV 137 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~-~~~~~~-~~lv 137 (332)
.+|.+.+.||+|.||.||++. ..+|..+|.|.++-......+..+...|+.+|++++|||||+++++ +..++. ++|+
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 457888899999999999999 7899999999998666666666678999999999999999999994 444554 8999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCC-CeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP-NIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~-~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
||+|.+|+|.++++........+++.++++++.|++.||..+|+.+.. .|+||||||.||+++.+|.+|++|||++++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999999987666666799999999999999999999995322 2999999999999999999999999999887
Q ss_pred Cccc------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 217 PEEK------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 217 ~~~~------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
.... .||+.||+||.... ..|+.+|||||+||++|||+.-.+||.|..-...-..+..+.+..+.+
T Consensus 179 ~s~~tfA~S~VGTPyYMSPE~i~~---~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~----- 250 (375)
T KOG0591|consen 179 SSKTTFAHSLVGTPYYMSPERIHE---SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD----- 250 (375)
T ss_pred cchhHHHHhhcCCCcccCHHHHhc---CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcH-----
Confidence 6543 69999999999987 789999999999999999999999999875555545555553322111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
.--...+..++..|+..||+.||+...+++.+..
T Consensus 251 ---~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 251 ---EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ---HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 2223468889999999999999985555555443
No 8
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-51 Score=381.24 Aligned_cols=253 Identities=25% Similarity=0.421 Sum_probs=224.8
Q ss_pred CCCCCCceeeccCCeEEEEEEeC----CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLS----TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 136 (332)
....+.++||.|.||.|++|+++ ....||||.++... ..++..+|+.|..+|.+++||||+++.|+.......+|
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEE
Confidence 34456689999999999999953 33589999998654 34556689999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
++|||++|+|+.|++++..+ +++.+...|+.+||.||.||.+. ++|||||.++|||++.+..+|++|||+++..
T Consensus 708 iTEyMENGsLDsFLR~~DGq---ftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvl 781 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 781 (996)
T ss_pred EhhhhhCCcHHHHHhhcCCc---eEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeec
Confidence 99999999999999987654 78889999999999999999999 9999999999999999999999999999987
Q ss_pred Cccc---------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCC
Q 020027 217 PEEK---------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDP 286 (332)
Q Consensus 217 ~~~~---------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 286 (332)
.+.. .....|.|||.... ..+|.+|||||||+++||.++ |.+||.+...+++.+.+.+
T Consensus 782 edd~~~~ytt~GGKIPiRWTAPEAIa~---RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~--------- 849 (996)
T KOG0196|consen 782 EDDPEAAYTTLGGKIPIRWTAPEAIAY---RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQ--------- 849 (996)
T ss_pred ccCCCccccccCCccceeecChhHhhh---cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHh---------
Confidence 5543 12467999999887 789999999999999999998 9999999988888887766
Q ss_pred cCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccCC
Q 020027 287 RLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332 (332)
Q Consensus 287 ~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~~~ 332 (332)
.++.|.+.+|+..|..||..||+.|-.+||.|.+|+..|.+++.+|
T Consensus 850 gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 850 GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 3556667778889999999999999999999999999999999887
No 9
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-50 Score=349.05 Aligned_cols=244 Identities=27% Similarity=0.346 Sum_probs=204.6
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCc-eeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGE-RIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~ 138 (332)
++.+..+.||+|.-|+||+++ ..+++.+|+|.+.... ......++.+|+++++..+||+||.++|.|..++. .+|+|
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~-~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNI-DPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccC-CHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 356777899999999999999 4689999999995433 23334468999999999999999999999999984 99999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhc-CCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ-GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||++|+|+.+++..+. +++...-+++.++++||.|||+ + .|+||||||+|+|++.+|++||||||.+....
T Consensus 158 EYMDgGSLd~~~k~~g~----i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 158 EYMDGGSLDDILKRVGR----IPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred hhcCCCCHHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 99999999999987543 8899999999999999999996 5 99999999999999999999999999997655
Q ss_pred c----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCch-----hHHHHHHHhhhcccccccCCcC
Q 020027 218 E----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGL-----LVKWALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 218 ~----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 288 (332)
+ +..||..||+||...+ ..|+.++||||||+.++|+++|+.|+... ..-+.+.++..+ +..
T Consensus 231 nS~a~tfvGT~~YMsPERi~g---~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~-------ppP 300 (364)
T KOG0581|consen 231 NSIANTFVGTSAYMSPERISG---ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE-------PPP 300 (364)
T ss_pred hhhcccccccccccChhhhcC---CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC-------CCC
Confidence 4 3479999999999887 78999999999999999999999998764 222333334332 222
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..|.. ....++.+++..|++.||.+|||+.|+++
T Consensus 301 ~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 301 RLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 22222 35568999999999999999999999875
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-51 Score=386.21 Aligned_cols=254 Identities=27% Similarity=0.404 Sum_probs=219.8
Q ss_pred cCCCCCCceeeccCCeEEEEEEe------CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCc
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGE 133 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 133 (332)
..+....+.||+|+||+||+|+. ++...||||.++.... .....+|.+|+..++.++|||||+++|.|..++.
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~-~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE-NQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc-HHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 34555668899999999999983 3456899999975543 3345579999999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhcccCCC----------CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC
Q 020027 134 RIIVSEFINMASLDFYLHENNDG----------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF 203 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 203 (332)
.++++|||..|||.+|+...... +..++..+.+.|+.|||.||.||.++ .+|||||..+|+|+.++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce
Confidence 99999999999999999754321 23378899999999999999999999 999999999999999999
Q ss_pred ceEEccCCccccCCccc--------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHH
Q 020027 204 CARVCDYGLSFLAPEEK--------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPL 274 (332)
Q Consensus 204 ~~kl~dfg~a~~~~~~~--------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~ 274 (332)
.|||+|||+++..-... --..+||+||.... +++|++||||||||+|||++| |+.||.+...+++...
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly---~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~ 717 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY---GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIEC 717 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc---CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHH
Confidence 99999999997543221 23568999999887 899999999999999999999 9999999999999998
Q ss_pred hhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 275 IKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
+.++.+ .+.+.+|+.++++||..||+.+|.+||||+||.++|+...
T Consensus 718 i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 718 IRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred HHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 888653 4556677889999999999999999999999999998764
No 11
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-48 Score=354.23 Aligned_cols=264 Identities=25% Similarity=0.354 Sum_probs=222.2
Q ss_pred hHHHHHhcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC
Q 020027 53 LTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG 132 (332)
Q Consensus 53 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 132 (332)
..++++..+.+.....||+|.||+||+|++. ..||||.+............|.+|+..+++-+|.||+-+.|+|..++
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 4677777788888899999999999999973 47999999887766666668999999999999999999999999988
Q ss_pred ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCc
Q 020027 133 ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~ 212 (332)
. .||+.+|+|.+|+.+++..... ++..+...|+.|||+||.|||.+ +|+|||||..||++.++++|||+|||+
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~etk---fdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQETK---FDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred e-eeeehhccCchhhhhccchhhh---hhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccc
Confidence 7 8999999999999999876533 88899999999999999999999 999999999999999999999999999
Q ss_pred cccCC--------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhccccccc
Q 020027 213 SFLAP--------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELL 284 (332)
Q Consensus 213 a~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 284 (332)
+.... +...|...|||||........+|+++||||||||++|||+||..||.....+.+..++..+-.
T Consensus 535 atvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l---- 610 (678)
T KOG0193|consen 535 ATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYL---- 610 (678)
T ss_pred eeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEeccccc----
Confidence 85422 223567789999999877778999999999999999999999999996655555444444321
Q ss_pred CCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 285 DPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
.++.. ....++..++.+|+..||.+++++||+|.+|+..|+.++.
T Consensus 611 ~pd~s-~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 611 MPDLS-KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred Cccch-hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 11111 1123456678899999999999999999999999988764
No 12
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-47 Score=371.56 Aligned_cols=255 Identities=25% Similarity=0.341 Sum_probs=215.4
Q ss_pred cCCCCCCceeeccCCeEEEEEEeC--CC----CEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCc
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLS--TG----KLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGE 133 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~--~~----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 133 (332)
.++.+..+.||+|+||.||+|... .| ..||+|.++.... ..+..+|.+|..+|+.++|||||+++|+|.....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~-~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS-EQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 445556688999999999999943 33 2599999875533 3334579999999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhcccCC---CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 134 RIIVSEFINMASLDFYLHENND---GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
.+|++|||++|+|..|+++... +...++....+.++.|||+|+.||+++ .+|||||..+|+|++....+||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 9999999999999999987522 234588899999999999999999999 9999999999999999999999999
Q ss_pred CccccCCcc-------c-CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccc
Q 020027 211 GLSFLAPEE-------K-RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFS 281 (332)
Q Consensus 211 g~a~~~~~~-------~-~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 281 (332)
|+|+..... . .-...||+||.+.. +.+++|+|||||||++||++| |..||.+....+++..+.++.
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d---~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-- 921 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKD---GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-- 921 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhh---cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC--
Confidence 999833221 1 22368999999988 899999999999999999999 999999988888777555542
Q ss_pred cccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 282 ELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
+.+.+..|++.++++|.+||+.+|++||+|..|++.+..++.
T Consensus 922 -------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 922 -------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred -------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 344556777899999999999999999999999998887653
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2e-47 Score=320.05 Aligned_cols=254 Identities=20% Similarity=0.239 Sum_probs=201.3
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
+.|+....+|+|+||.||+++ ..+|+.||||++...........-.++||+++++++|+|+|.+.++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 457888899999999999999 5689999999997654434334457899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
||+..-|.+ +....++ ++...+..++.|++.|+.|+|++ +++||||||+|||++.++.+|+||||+|+.....
T Consensus 82 ~~dhTvL~e-Le~~p~G---~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 82 YCDHTVLHE-LERYPNG---VPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred ecchHHHHH-HHhccCC---CCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 998755544 4443332 78899999999999999999999 9999999999999999999999999999987632
Q ss_pred c------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh--ccc-----------
Q 020027 220 K------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE--MRF----------- 280 (332)
Q Consensus 220 ~------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~--~~~----------- 280 (332)
. ..|.-|.|||.+.+. .+|++.+||||.||++.||++|.+-|.|..+-+.+..+.. +.+
T Consensus 155 gd~YTDYVATRWYRaPELLvGD--tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGD--TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred cchhhhhhhhhhccChhhhccc--CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence 2 457788999988764 7899999999999999999999998887655444333321 111
Q ss_pred ---ccccCCcCCCCCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 281 ---SELLDPRLAIPCE-----IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 281 ---~~~~~~~~~~~~~-----~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.-+.-|....+.+ ++-..-+.+++..|++.||++|+|.+|++.
T Consensus 233 ~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1011111111111 112335779999999999999999999874
No 14
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-47 Score=349.73 Aligned_cols=260 Identities=28% Similarity=0.377 Sum_probs=217.5
Q ss_pred HHHHHhcCCCCCCceeeccCCeEEEEEEeC--CC---CEEEEEEeccCc-ccccccccHHHHHHHhccCCCCCccceeee
Q 020027 54 TEIDAATDGFSHRRIIGQGRLGTVYAALLS--TG---KLVAVKRIHPRL-VLSNAGFGFASVIKTLSLAQHPNIVPILGF 127 (332)
Q Consensus 54 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~---~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 127 (332)
+.++...++....+.||+|+||.||+|++. ++ ..||+|..+... ....+..++++|.++|++++|||||+++|+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 344555566666799999999999999943 22 238999987533 344455579999999999999999999999
Q ss_pred eecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEE
Q 020027 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARV 207 (332)
Q Consensus 128 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 207 (332)
+..+...+++||+|.||+|.++++.... .++..+.+.++.+.|.||+|||++ +++||||..+|+|++.++.+||
T Consensus 230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~---~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKI 303 (474)
T KOG0194|consen 230 AVLEEPLMLVMELCNGGSLDDYLKKNKK---SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKI 303 (474)
T ss_pred EcCCCccEEEEEecCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEe
Confidence 9999999999999999999999987654 388999999999999999999999 9999999999999999999999
Q ss_pred ccCCccccCCccc------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhccc
Q 020027 208 CDYGLSFLAPEEK------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280 (332)
Q Consensus 208 ~dfg~a~~~~~~~------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 280 (332)
+|||+++...... .-...|+|||.+.. +.+++++|||||||++||+++ |..||.+....++...+....
T Consensus 304 SDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~---~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~- 379 (474)
T KOG0194|consen 304 SDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNT---GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNG- 379 (474)
T ss_pred CccccccCCcceeeccccccCcceecChhhhcc---CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcC-
Confidence 9999997764211 23468999999988 789999999999999999999 888999988777766663322
Q ss_pred ccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
++.+.+...+..+..++.+||..||++||||.++.+.|+.+..
T Consensus 380 -------~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 380 -------YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred -------ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 2333333555678889999999999999999999999988764
No 15
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-47 Score=337.16 Aligned_cols=254 Identities=21% Similarity=0.261 Sum_probs=205.8
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeeeeecCC-ceeE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGFSQAPG-ERII 136 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~l 136 (332)
.++|...+.||.|+||.||+|+ ..+|+.||||+++++...-++. --++|++.+++++ |||||++++.+.+.+ .+++
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 4578888999999999999999 7789999999998776543322 3579999999998 999999999998877 8999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
|||||+ .+|+++++... ..+++..+..|+.||++||+|+|.+ |+.|||+||+|||+..+..+||+|||+||..
T Consensus 88 VfE~Md-~NLYqLmK~R~---r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDRN---RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eHHhhh-hhHHHHHhhcC---CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 999996 79999998763 3489999999999999999999999 9999999999999998999999999999876
Q ss_pred Cccc-----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh--cc----------
Q 020027 217 PEEK-----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE--MR---------- 279 (332)
Q Consensus 217 ~~~~-----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~--~~---------- 279 (332)
.... ..|.-|+|||.+... +.|+.+.|+||+||+++|+.+-++.|.|...-+....+.+ |.
T Consensus 161 ~SkpPYTeYVSTRWYRAPEvLLrs--~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 161 RSKPPYTEYVSTRWYRAPEVLLRS--GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred ccCCCcchhhhcccccchHHhhhc--cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence 5443 578889999999875 8899999999999999999999998887644333222211 00
Q ss_pred ---------cccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 280 ---------FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 280 ---------~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
+.+.....+..-. .....++.+++.+|+++||++|||++|.++.
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~-p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLL-PNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhC-cccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 0011011111111 1245678899999999999999999998863
No 16
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.8e-46 Score=338.35 Aligned_cols=258 Identities=27% Similarity=0.416 Sum_probs=202.3
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEe------CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeec
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQA 130 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 130 (332)
...++|...+.||+|+||.||+|.. .+++.||+|.++.... ......+.+|+.++..+ +||||+++++++..
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-ASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-hHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 3457899999999999999999973 2456899999874422 22233578999999999 89999999998876
Q ss_pred C-CceeEEEeccCCCCHHHHhcccCCC-----------------------------------------------------
Q 020027 131 P-GERIIVSEFINMASLDFYLHENNDG----------------------------------------------------- 156 (332)
Q Consensus 131 ~-~~~~lv~e~~~~~~L~~~l~~~~~~----------------------------------------------------- 156 (332)
. +..+++|||+++|+|.+++......
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 4 4688999999999999998753210
Q ss_pred -----CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc--------cCCc
Q 020027 157 -----ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE--------KRGL 223 (332)
Q Consensus 157 -----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~--------~~~~ 223 (332)
...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++..... ..++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 12377888899999999999999998 9999999999999999999999999998754221 1345
Q ss_pred ccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHH-HHHHhhhcccccccCCcCCCCCChHHHHHHH
Q 020027 224 AGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKW-ALPLIKEMRFSELLDPRLAIPCEIKPLVRLA 301 (332)
Q Consensus 224 ~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (332)
..|+|||.+.. ..++.++|||||||++|||++ |..||.+....+ ....+..+. ....+ ......+.
T Consensus 240 ~~y~aPE~~~~---~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~l~ 307 (338)
T cd05102 240 LKWMAPESIFD---KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT-------RMRAP--ENATPEIY 307 (338)
T ss_pred ccccCcHHhhc---CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC-------CCCCC--CCCCHHHH
Confidence 67999998875 678999999999999999997 999997654322 222222211 11111 12234688
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHhccccC
Q 020027 302 KVALACVGNSRKNRPSIVQVATILNNLVGD 331 (332)
Q Consensus 302 ~l~~~c~~~dp~~RPs~~~i~~~L~~~~~~ 331 (332)
+++.+||+.||++|||+.|+++.|++++..
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999998764
No 17
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-46 Score=323.39 Aligned_cols=240 Identities=22% Similarity=0.268 Sum_probs=207.3
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
...++|+..++||+|+||+||.++ ..+++.+|+|++++...... +......|..++..++||.||.++-.+++...+|
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY 101 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence 456789999999999999999999 67899999999998766544 3335789999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
+|+||+.||.|...+.+.+. +++..+.-++..|+.||.|||+. +||||||||+|||+|.+|.++|+|||+++.
T Consensus 102 lVld~~~GGeLf~hL~~eg~----F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~ 174 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQREGR----FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKE 174 (357)
T ss_pred EEEeccCCccHHHHHHhcCC----cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchh
Confidence 99999999999999987654 89999999999999999999999 999999999999999999999999999974
Q ss_pred CC------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 216 AP------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 216 ~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
.. ...+||+.|||||.+.. ..++..+|.||+|+++|||++|.+||.+.......+.+..++.. .
T Consensus 175 ~~~~~~~t~tfcGT~eYmAPEil~~---~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~-------~ 244 (357)
T KOG0598|consen 175 DLKDGDATRTFCGTPEYMAPEILLG---KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLP-------L 244 (357)
T ss_pred cccCCCccccccCCccccChHHHhc---CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCC-------C
Confidence 32 23479999999999988 68999999999999999999999999998877777766665411 1
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCC
Q 020027 290 IPCEIKPLVRLAKVALACVGNSRKNRP 316 (332)
Q Consensus 290 ~~~~~~~~~~l~~l~~~c~~~dp~~RP 316 (332)
.+. .-..+..+++...++.||++|-
T Consensus 245 ~p~--~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 245 PPG--YLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CCc--cCCHHHHHHHHHHhccCHHHhc
Confidence 111 1122677999999999999995
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-46 Score=333.28 Aligned_cols=257 Identities=21% Similarity=0.263 Sum_probs=205.3
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC--Cce
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GER 134 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 134 (332)
...+.|+.++.||+|+||.||+|+ ..+|+.||+|+++.+........-..+||.+|++++||||+++.+..... +.+
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 345678899999999999999999 78999999999987765554444568999999999999999999998766 789
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
|+|+|||++ +|.-++....-. ++..++..++.|++.||.|||++ +|+|||||.+|||+|++|.+||+|||+|+
T Consensus 194 YlVFeYMdh-DL~GLl~~p~vk---ft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr 266 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGVK---FTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLAR 266 (560)
T ss_pred EEEEecccc-hhhhhhcCCCcc---cChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEecccccee
Confidence 999999975 787777654322 89999999999999999999999 99999999999999999999999999998
Q ss_pred cCCccc-------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh-------ccc
Q 020027 215 LAPEEK-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE-------MRF 280 (332)
Q Consensus 215 ~~~~~~-------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~-------~~~ 280 (332)
+..... .-|.-|.+||.+.+. ..|++++|+||.||||.||++|++.|.|...-+.+..+-. ..|
T Consensus 267 ~y~~~~~~~~T~rVvTLWYRpPELLLG~--t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W 344 (560)
T KOG0600|consen 267 FYTPSGSAPYTSRVVTLWYRPPELLLGA--TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYW 344 (560)
T ss_pred eccCCCCcccccceEEeeccChHHhcCC--cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcc
Confidence 654322 357889999999875 8899999999999999999999999998765555443321 011
Q ss_pred c--c-----ccCCcCCCCCCh-----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 281 S--E-----LLDPRLAIPCEI-----KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 281 ~--~-----~~~~~~~~~~~~-----~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
. . ...+........ .-.....+|+..+|..||++|.|+.+.++
T Consensus 345 ~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 345 PVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1 1 111110000000 11235678899999999999999998875
No 19
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-46 Score=335.82 Aligned_cols=258 Identities=24% Similarity=0.309 Sum_probs=212.8
Q ss_pred CCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEecc
Q 020027 62 GFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 141 (332)
...+.+.||+|.||.|..+....+..||+|.+++... .+...+|.+|+++|.+++||||++++|.|..++.+++++||+
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT-KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccc-hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 3445578999999999999987889999999987754 334567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc-
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK- 220 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~- 220 (332)
++|+|.+|+..+.... ++-....+|+.||+.||+||.+. ++||||+.++|+|++.++++||+|||+++-+-...
T Consensus 618 EnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred hcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCc
Confidence 9999999998764322 44566778999999999999998 99999999999999999999999999998543221
Q ss_pred -------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh--CCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 221 -------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS--GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 221 -------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
.-...|||+|.+.. +++|++||+|+||+.+||+++ ..+||.....+.+...... +..-.....-.+
T Consensus 693 y~vqgr~vlpiRwmawEsill---gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~--~~~~~~~~~~l~ 767 (807)
T KOG1094|consen 693 YRVQGRAVLPIRWMAWESILL---GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGE--FFRDQGRQVVLS 767 (807)
T ss_pred eeeecceeeeeeehhHHHHHh---ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhh--hcCCCCcceecc
Confidence 23468999999887 899999999999999999987 7889988766655433222 211112222334
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
.+.-|+.+++++|.+||..|.++||||+++...|++...
T Consensus 768 ~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~~ 806 (807)
T KOG1094|consen 768 RPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDAL 806 (807)
T ss_pred CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhcc
Confidence 455677789999999999999999999999999987654
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-46 Score=326.17 Aligned_cols=247 Identities=28% Similarity=0.368 Sum_probs=196.7
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC--ceeE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG--ERII 136 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~l 136 (332)
..++...+.||+|+||.||.+.. ++|+..|||.+....... ...+.+|+.+|++++|||||+++|...... .+++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT--SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh--HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 34567788999999999999994 569999999987552222 334789999999999999999999844333 6899
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC-CCceEEccCCcccc
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE-KFCARVCDYGLSFL 215 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~dfg~a~~ 215 (332)
.|||+++|+|.+++...+. .+++..+..+..||++||+|||++ |++||||||+|||++. ++.+||+|||++..
T Consensus 94 ~mEy~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred eeeccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 9999999999999987653 289999999999999999999999 9999999999999999 79999999998875
Q ss_pred CCc---------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCch-hHHHHHHHhhhcccccccC
Q 020027 216 APE---------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGL-LVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 216 ~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~ 285 (332)
... ...||+.|||||++.. +.....++||||+||++.||+||++||... ......-.+.... ..
T Consensus 168 ~~~~~~~~~~~~~~~Gtp~~maPEvi~~--g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~----~~ 241 (313)
T KOG0198|consen 168 LESKGTKSDSELSVQGTPNYMAPEVIRN--GEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED----SL 241 (313)
T ss_pred cccccccccccccccCCccccCchhhcC--CCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC----CC
Confidence 441 2369999999999985 233446999999999999999999999873 2211111111111 11
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
| ..|.. ...+..+++.+|++.||++|||++++++.
T Consensus 242 P--~ip~~--ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 242 P--EIPDS--LSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred C--CCCcc--cCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 1 22222 33467799999999999999999999874
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=323.16 Aligned_cols=261 Identities=21% Similarity=0.253 Sum_probs=213.4
Q ss_pred HHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 56 IDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 56 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
.....+.|+....||.|..+.||+|+ .++++.||||++..+..... ...+.+|+..|+.++||||++++..|..+..+
T Consensus 21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~L 99 (516)
T KOG0582|consen 21 FPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSEL 99 (516)
T ss_pred CCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEeccee
Confidence 33557789999999999999999999 67889999999987665444 34678999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
|+||.||.+|++.+.++.....+ +++..+..|+.++++||.|||.+ |.+|||+|+.|||++.+|++||+|||.+.
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~G--l~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa 174 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDG--LEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSA 174 (516)
T ss_pred EEeehhhcCCcHHHHHHHHcccc--ccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeee
Confidence 99999999999999998754433 89999999999999999999999 99999999999999999999999999763
Q ss_pred cCC----------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhccccccc
Q 020027 215 LAP----------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELL 284 (332)
Q Consensus 215 ~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 284 (332)
... +...||+.|||||.+.+.. ..|+.|+||||||+...||.+|..||....+..++-.-..+......
T Consensus 175 ~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~-~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~ 253 (516)
T KOG0582|consen 175 SLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQL-HGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL 253 (516)
T ss_pred eecccCceeeEeeccccCcccccChHHhhhcc-cCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc
Confidence 221 3347899999999954332 56899999999999999999999999988776655444343322211
Q ss_pred CCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 285 DPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...+.....-.-...+.+++..|++.||.+|||++++++
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 112222222222336778999999999999999999875
No 22
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=6.2e-45 Score=322.31 Aligned_cols=249 Identities=20% Similarity=0.234 Sum_probs=201.1
Q ss_pred CCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccc-cccHHHHHHHhccCCCCCccceeeeeec----CCceeEEE
Q 020027 64 SHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSLAQHPNIVPILGFSQA----PGERIIVS 138 (332)
Q Consensus 64 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 138 (332)
.....||+|++|.||+|.. +|+.||+|.++........ ...+.+|+.++++++||||++++|++.. ....+++|
T Consensus 23 ~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~ 101 (283)
T PHA02988 23 YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLIL 101 (283)
T ss_pred CCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEE
Confidence 3346899999999999998 6889999999765332221 2346799999999999999999999866 35678999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++|+|.+++.... .+++...+.++.|++.|+.|||+.. +++||||||+||++++++.+|++|||+++....
T Consensus 102 Ey~~~g~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~ 175 (283)
T PHA02988 102 EYCTRGYLREVLDKEK----DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSS 175 (283)
T ss_pred EeCCCCcHHHHHhhCC----CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcc
Confidence 9999999999997643 2788999999999999999999731 788999999999999999999999999875433
Q ss_pred c---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 219 E---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 219 ~---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
. ..++..|+|||..... ...++.++|||||||++|||+||+.||.+.........+..... ++.. +..
T Consensus 176 ~~~~~~~~~~y~aPE~~~~~-~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~------~~~~--~~~ 246 (283)
T PHA02988 176 PPFKNVNFMVYFSYKMLNDI-FSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNN------SLKL--PLD 246 (283)
T ss_pred ccccccCcccccCHHHhhhc-cccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC------CCCC--CCc
Confidence 2 3477899999988642 14688999999999999999999999988766555444432211 1111 223
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 296 PLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
+...+.+++.+||+.||++|||++|+++.|+.+
T Consensus 247 ~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 247 CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 345788999999999999999999999999865
No 23
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.2e-45 Score=302.73 Aligned_cols=255 Identities=21% Similarity=0.237 Sum_probs=208.9
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|...+.+|+|.||.||+|+ .++|+.||||+++.....+.......+||+.++.++|+||+.+.+.+...+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 468888999999999999999 7899999999999876655555668999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|++ .+|+..++.... .++..++..++.++++|++|||++ .|+||||||.|+|++.+|.+||+|||+|+.....
T Consensus 82 fm~-tdLe~vIkd~~i---~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDKNI---ILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred ecc-ccHHHHhccccc---ccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 996 699999986543 378899999999999999999999 9999999999999999999999999999876533
Q ss_pred c------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh-------cccccc---
Q 020027 220 K------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE-------MRFSEL--- 283 (332)
Q Consensus 220 ~------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~-------~~~~~~--- 283 (332)
. .-|.-|.|||.+-+. ..|+..+||||.||++.||+-|.+.|.|..+-+.+..+-. ..|.++
T Consensus 155 ~~~~~~~V~TRWYRAPELLfGs--r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 155 NRIQTHQVVTRWYRAPELLFGS--RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred CcccccceeeeeccChHHhccc--hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 2 356789999988764 7899999999999999999999998888766555544322 111111
Q ss_pred cCC-cCC-CCC------ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 284 LDP-RLA-IPC------EIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 284 ~~~-~~~-~~~------~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
-|. .+. .|. -+.+...+.+++..+|.+||.+|+|++|.++.
T Consensus 233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 110 000 111 12234466899999999999999999998753
No 24
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-47 Score=340.09 Aligned_cols=239 Identities=24% Similarity=0.348 Sum_probs=203.8
Q ss_pred cCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.+....++-||.|+.|.||.|++. ++.||||+++.-. ..+|+-|++|+|+||+.+.|+|.....++|+||
T Consensus 123 Fe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk---------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiME 192 (904)
T KOG4721|consen 123 FEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK---------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIME 192 (904)
T ss_pred HHHhhhhhhhccCcccceeeeecc-CceehhHHHhhhh---------hhhHHHHHhccCcceeeEeeeecCCceeEEeee
Confidence 334455677999999999999984 5799999886221 567889999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
||..|.|...++.... ++.........+||.||.|||.+ .|+|||||.-|||++.+..+||+|||-++...+.
T Consensus 193 fCa~GqL~~VLka~~~----itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 193 FCAQGQLYEVLKAGRP----ITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred ccccccHHHHHhccCc----cCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 9999999999986543 77788889999999999999999 9999999999999999999999999998776543
Q ss_pred c-----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 K-----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 ~-----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
. .||..|||||.+.. .+.+.|+|||||||+||||+||..||.+.....+...+.. ..+..+.+.
T Consensus 266 STkMSFaGTVaWMAPEvIrn---ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGs--------NsL~LpvPs 334 (904)
T KOG4721|consen 266 STKMSFAGTVAWMAPEVIRN---EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGS--------NSLHLPVPS 334 (904)
T ss_pred hhhhhhhhhHhhhCHHHhhc---CCcccccceehhHHHHHHHHhcCCCccccchheeEEeccC--------CcccccCcc
Confidence 3 68999999999987 7899999999999999999999999977543322222222 345566677
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
.|++-+.-|+.+||+-.|.+||||++|+..|.
T Consensus 335 tcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 335 TCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred cCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 77788889999999999999999999998875
No 25
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-45 Score=330.94 Aligned_cols=246 Identities=22% Similarity=0.286 Sum_probs=208.7
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccc-cHHHHHHHhccC-CCCCccceeeeeecCCce
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLA-QHPNIVPILGFSQAPGER 134 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~-~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 134 (332)
...++|...+.||+|+|++|++|+ ..+++.+|||++.++....+... ....|-..|.+| .||.|++++-.|.++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 445789999999999999999999 77999999999988776554443 356788888888 899999999999999999
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
|+++||+++|+|.++|+..+. +++.-...++.+|+.||+|||++ |||||||||+|||+|.++.+||+|||.|+
T Consensus 150 YFvLe~A~nGdll~~i~K~Gs----fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYGS----FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred EEEEEecCCCcHHHHHHHhCc----chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccc
Confidence 999999999999999987654 88888999999999999999999 99999999999999999999999999886
Q ss_pred cCCc-------------------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHh
Q 020027 215 LAPE-------------------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI 275 (332)
Q Consensus 215 ~~~~-------------------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~ 275 (332)
..+. +..||..|++||.+.. ...++.+|+|+|||++|+|+.|.+||.+...--.+..+
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~---~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI 299 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND---SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKI 299 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcC---CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence 5421 1258999999999987 78899999999999999999999999987655454444
Q ss_pred hhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 276 KEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
... .+..+.... ..+.+|+.+.|..||.+|+|.++|-+
T Consensus 300 ~~l--------~y~fp~~fp--~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 300 QAL--------DYEFPEGFP--EDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHh--------cccCCCCCC--HHHHHHHHHHHccCccccccHHHHhh
Confidence 332 222222222 36779999999999999999988765
No 26
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.4e-45 Score=318.97 Aligned_cols=251 Identities=22% Similarity=0.358 Sum_probs=204.6
Q ss_pred cCCCCCCceeeccCCeEEEEEEe----CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL----STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
.++|+..+.||+|+||.||+|.. ..+..||+|.++.... ......+.+|+..++.++||||+++++++..++..+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 45688889999999999999974 2456899999876432 222335789999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++|||+++++|.+++..... .+++..++.++.|++.|++|||++ +++||||||+||+++.++.++++|||.+..
T Consensus 83 lv~e~~~~~~L~~~l~~~~~---~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHEG---QLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred EEEEeCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 99999999999999976432 378999999999999999999998 999999999999999999999999998654
Q ss_pred CCcc-------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCc
Q 020027 216 APEE-------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPR 287 (332)
Q Consensus 216 ~~~~-------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (332)
.... ..++..|+|||.+.. ..++.++|||||||++||+++ |..||.+.........+.++.
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-------- 225 (266)
T cd05064 157 DKSEAIYTTMSGKSPVLWAAPEAIQY---HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF-------- 225 (266)
T ss_pred ccccchhcccCCCCceeecCHHHHhh---CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC--------
Confidence 3211 124567999998876 678999999999999999886 999998766555544443321
Q ss_pred CCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 288 ~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
..+.+..++..+.+++.+||+.+|++|||+.+|.+.|++++
T Consensus 226 -~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~~ 266 (266)
T cd05064 226 -RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKMV 266 (266)
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhhC
Confidence 11122234457889999999999999999999999998763
No 27
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=328.49 Aligned_cols=248 Identities=24% Similarity=0.318 Sum_probs=206.7
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc---cccccHHHHHHHhccCC-CCCccceeeeeecCC
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS---NAGFGFASVIKTLSLAQ-HPNIVPILGFSQAPG 132 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 132 (332)
...++|...+.||+|+||+|+.|. ..+++.||+|.+....... .......+|+.+++.++ ||||++++++.....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 446689999999999999999998 5688999999776642221 12223568999999998 999999999999999
Q ss_pred ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC-CceEEccCC
Q 020027 133 ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK-FCARVCDYG 211 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~dfg 211 (332)
..+++|||+.+|+|.+++...+. +.+..+..++.|++.|++|||++ +|+||||||+|+|++.+ +++||+|||
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~----l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGR----LKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCC----CChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 99999999999999999987433 78899999999999999999999 99999999999999999 999999999
Q ss_pred ccccCC------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccC
Q 020027 212 LSFLAP------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 212 ~a~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
++.... ...+|++.|+|||.+..... ....++||||+||+||.|++|+.||...........+..+.
T Consensus 167 ~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~-Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~------ 239 (370)
T KOG0583|consen 167 LSAISPGEDGLLKTFCGSPAYAAPEVLSGKGT-YSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGE------ 239 (370)
T ss_pred cccccCCCCCcccCCCCCcccCCHHHhCCCCC-cCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCC------
Confidence 998662 23479999999999987521 33589999999999999999999999866555555444432
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVA 322 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~ 322 (332)
+..+.... ..++.+++.+|+..||.+|+|+.+|+
T Consensus 240 --~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 240 --FKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred --ccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 23333221 34778999999999999999999998
No 28
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-45 Score=334.77 Aligned_cols=258 Identities=24% Similarity=0.332 Sum_probs=221.8
Q ss_pred HHHHHhcCCCCCCceeeccCCeEEEEEEeC-CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC
Q 020027 54 TEIDAATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG 132 (332)
Q Consensus 54 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 132 (332)
++++....+......||-|.||.||.|.|+ -...||||.++.+. -+..+|+.|..+|+.++|||+|+++|+|..+.
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---MeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---hhHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 566666667777889999999999999964 56789999997543 23446899999999999999999999999999
Q ss_pred ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCc
Q 020027 133 ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~ 212 (332)
.+||++|||.+|+|.+|+++..+. .++.--.+.|+.||+.||.||..+ +++||||..+|+|+.++..+|++|||+
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr~--ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGL 411 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNRS--EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGL 411 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhchh--hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccch
Confidence 999999999999999999986543 366677889999999999999998 999999999999999999999999999
Q ss_pred cccCCccc-------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhccccccc
Q 020027 213 SFLAPEEK-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELL 284 (332)
Q Consensus 213 a~~~~~~~-------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 284 (332)
+++..... .-...|.|||.+.- ..++.|+|||+|||+|||+.| |..||.|.....++..+..
T Consensus 412 sRlMtgDTYTAHAGAKFPIKWTAPEsLAy---NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEk------- 481 (1157)
T KOG4278|consen 412 SRLMTGDTYTAHAGAKFPIKWTAPESLAY---NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEK------- 481 (1157)
T ss_pred hhhhcCCceecccCccCcccccCcccccc---cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhc-------
Confidence 98875442 23467999998876 678999999999999999999 9999999877777665554
Q ss_pred CCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccC
Q 020027 285 DPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGD 331 (332)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~~ 331 (332)
.++...+..|+.++++||+.||+++|.+||+|.|+.+.++.+..+
T Consensus 482 --gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 482 --GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred --cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 345555667777999999999999999999999999999987643
No 29
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.1e-45 Score=330.15 Aligned_cols=242 Identities=21% Similarity=0.271 Sum_probs=208.7
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|...+.||+|+||.||||+ ..+.+.||+|.+.+....+.+.....+|+++++.++||||+.++++++...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 467778899999999999999 5689999999998876666666678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+.| +|..++.+... +++..+..++.++..||.|||++ +|.|||+||+|||++.++++|+||||+|+.....
T Consensus 82 ~a~g-~L~~il~~d~~----lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK----LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred hhhh-hHHHHHHhccC----CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence 9976 99999987655 89999999999999999999999 9999999999999999999999999999876543
Q ss_pred ------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCC
Q 020027 220 ------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 220 ------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
..||+-|||||.... .+|+..+|+||+||++||+++|++||.........+.+... +. ..+
T Consensus 154 t~vltsikGtPlYmAPElv~e---~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d-------~v---~~p 220 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEE---QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD-------PV---KPP 220 (808)
T ss_pred ceeeeeccCcccccCHHHHcC---CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC-------CC---CCc
Confidence 379999999999986 79999999999999999999999999876554444444332 11 112
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 294 IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..-...+..++...+..||.+|.|-.+++.
T Consensus 221 ~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 221 STASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 233446778999999999999999888763
No 30
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.8e-44 Score=320.48 Aligned_cols=259 Identities=23% Similarity=0.318 Sum_probs=199.4
Q ss_pred cCCCCCCceeeccCCeEEEEEEeC-----------------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCcc
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLS-----------------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 122 (332)
.++|...+.||+|+||.||+|... ++..||+|.+..... ......+.+|+.++++++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-KNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCee
Confidence 356888899999999999999742 234799999875432 22233578999999999999999
Q ss_pred ceeeeeecCCceeEEEeccCCCCHHHHhcccCC---------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 020027 123 PILGFSQAPGERIIVSEFINMASLDFYLHENND---------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNI 187 (332)
Q Consensus 123 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i 187 (332)
++++++...+..+++|||+++++|.+++..... ....+++.....++.|++.||.|||+. ++
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i 159 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF 159 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence 999999999999999999999999999865321 112367888999999999999999998 99
Q ss_pred eecCCCCCCEEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-
Q 020027 188 IHGCIKASNILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS- 258 (332)
Q Consensus 188 vH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t- 258 (332)
+||||||+|||++.++.+||+|||+++..... ..++..|+|||.+.. ..++.++||||||+++|||++
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~~ 236 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM---GKFTTASDVWAFGVTLWEILML 236 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc---CCCCchhhhHHHHHHHHHHHHc
Confidence 99999999999999999999999998754221 134668999998865 678999999999999999987
Q ss_pred -CCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 259 -GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 259 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
+..||.+.............. ... ........+..++..+.+++.+||+.||++|||+.+|.+.|++
T Consensus 237 ~~~~p~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 237 CKEQPYGELTDEQVIENAGEFF-RDQ-GRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred cCCCCCCcCCHHHHHHHHHHHh-hhc-cccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 556777654443332221100 000 0000111122334478899999999999999999999998864
No 31
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.4e-44 Score=321.36 Aligned_cols=243 Identities=18% Similarity=0.208 Sum_probs=201.0
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|+..+.||+|+||.||+|.. .+|+.||+|.+....... .....+.+|+.+++.++||||+++++++.+.+..+++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 4688899999999999999994 578999999987543221 22334688999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... +++.....++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRNSGR----FSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999976432 78888999999999999999998 999999999999999999999999999876543
Q ss_pred c---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 219 E---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 219 ~---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
. ..|+..|+|||.+.. ..++.++|||||||++|||+||+.||.+.........+..+. ...+...
T Consensus 154 ~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~--------~~~~~~~- 221 (291)
T cd05612 154 RTWTLCGTPEYLAPEVIQS---KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGK--------LEFPRHL- 221 (291)
T ss_pred CcccccCChhhcCHHHHcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--------cCCCccC-
Confidence 2 357889999999876 567899999999999999999999998876655554444332 1111111
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 020027 296 PLVRLAKVALACVGNSRKNRPS-----IVQVAT 323 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RPs-----~~~i~~ 323 (332)
...+.+++.+||+.||.+||+ ++++++
T Consensus 222 -~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 222 -DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred -CHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 236779999999999999995 777764
No 32
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-45 Score=327.62 Aligned_cols=243 Identities=24% Similarity=0.284 Sum_probs=208.2
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
..|.....||+|+-|.||.++ ..+++.||||++.......++ -..+|+.+|+..+|+|||.+++.+...+.+|+|||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~ke--LilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME 350 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKE--LLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME 350 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchh--hhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence 467777899999999999999 678999999999876544333 35899999999999999999999988899999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+++|+|.+.+.... +++.++..|+.++++||+|||.+ +|+|||||..|||++.+|.+||+|||++....+.
T Consensus 351 ym~ggsLTDvVt~~~-----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 351 YMEGGSLTDVVTKTR-----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred ecCCCchhhhhhccc-----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence 999999999886543 88999999999999999999999 9999999999999999999999999998766543
Q ss_pred ------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCC
Q 020027 220 ------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 220 ------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
..||+.|||||.... ..|++++||||||++++||+-|.+||-...+-.++..+.... .+....+
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtr---k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng-------~P~lk~~ 492 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTR---KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-------TPKLKNP 492 (550)
T ss_pred cCccccccCCCCccchhhhhh---cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcC-------CCCcCCc
Confidence 269999999999988 789999999999999999999999998665555555554432 2222333
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 294 IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
......+.+++.+||+.|+++|||+.|+|+
T Consensus 493 ~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 493 EKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred cccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 344447889999999999999999999986
No 33
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4e-45 Score=298.39 Aligned_cols=263 Identities=21% Similarity=0.277 Sum_probs=219.3
Q ss_pred HHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC----
Q 020027 57 DAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP---- 131 (332)
Q Consensus 57 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---- 131 (332)
.+..++|.+.+.||+|||+.||.++ ..+++.+|+|++..... ++....++|+...++++|||+++++++...+
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~--~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ--EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccch--HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 3456789999999999999999999 78999999999976542 2233568999999999999999999987433
Q ss_pred -CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 132 -GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 132 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
...||++.|...|+|.+.+......+..+++.+.+.++.++++||.+||+. .+++.||||||.|||+++++.+++.||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEec
Confidence 458999999999999999988766666799999999999999999999997 345999999999999999999999999
Q ss_pred CccccCCcc---------------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHh
Q 020027 211 GLSFLAPEE---------------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI 275 (332)
Q Consensus 211 g~a~~~~~~---------------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~ 275 (332)
|.+...+-. ...|..|.|||.|.-+.+...++++|||||||+||+|+.|..||.....
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~------- 246 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ------- 246 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-------
Confidence 998655321 1468899999999988778899999999999999999999999965321
Q ss_pred hhccc-ccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 276 KEMRF-SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 276 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
.-+.+ ..+..+.+..|.+..-++.+..++.+|++.||.+||++.+++..+..+.
T Consensus 247 ~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 247 QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 11222 2234445556655556668889999999999999999999999988764
No 34
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-45 Score=330.00 Aligned_cols=249 Identities=25% Similarity=0.392 Sum_probs=210.4
Q ss_pred CCCCCceeeccCCeEEEEEEeC---CCC--EEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeE
Q 020027 62 GFSHRRIIGQGRLGTVYAALLS---TGK--LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~---~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 136 (332)
.....+.||+|.||.||+|.+. .|+ .||||..+.+...++ ...|+.|..+|++++||||+++.|.|... ..||
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~-tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wi 467 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD-TEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWI 467 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhh-HHHHHHHHHHHHhCCCcchhheeeeeecc-ceeE
Confidence 3344578999999999999843 222 699999887665544 45789999999999999999999999765 4789
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
|||.++.|.|..|++.+... ++..+...++.||+.||+|||+. ++|||||..+|||+..+..+|++|||+++..
T Consensus 468 vmEL~~~GELr~yLq~nk~s---L~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKDS---LPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred EEecccchhHHHHHHhcccc---chHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhc
Confidence 99999999999999887654 78888999999999999999998 9999999999999999999999999999887
Q ss_pred Cccc-------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcC
Q 020027 217 PEEK-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 217 ~~~~-------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (332)
.+.. .-...||+||...- .+++++||||-|||++||++. |..||.+-...++...+ ...-
T Consensus 542 ed~~yYkaS~~kLPIKWmaPESINf---RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i---------EnGe 609 (974)
T KOG4257|consen 542 EDDAYYKASRGKLPIKWMAPESINF---RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI---------ENGE 609 (974)
T ss_pred cccchhhccccccceeecCccccch---hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe---------cCCC
Confidence 6543 22467999998776 789999999999999999998 99999986544433222 3334
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
+.|.+++|+..++.+|.+||++||.+||+|.|+...|+.++.
T Consensus 610 RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 610 RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 566777788899999999999999999999999999988764
No 35
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9.4e-44 Score=319.71 Aligned_cols=253 Identities=19% Similarity=0.360 Sum_probs=201.9
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCC----EEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
..+|+..+.||+|+||.||+|.+ .+++ .||+|.++.... ......+.+|+.+++.++||||++++|++... ..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 35689999999999999999984 3444 389999864322 22233578899999999999999999999765 46
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
++++||+++|+|.+++..... .+++...+.++.|++.||+|||++ +++||||||+||++++++.+||+|||+++
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred eeeeecCCCCCHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccc
Confidence 799999999999999976432 278889999999999999999998 99999999999999999999999999997
Q ss_pred cCCccc--------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccC
Q 020027 215 LAPEEK--------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 215 ~~~~~~--------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
...... ..+..|++||.... ..++.++|||||||++||++| |+.||.+.............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~apE~~~~---~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~------- 227 (316)
T cd05108 158 LLGADEKEYHAEGGKVPIKWMALESILH---RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG------- 227 (316)
T ss_pred cccCCCcceeccCCccceeecChHHhcc---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC-------
Confidence 653221 23457999998876 678999999999999999998 99999876544433322221
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccCC
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~~~ 332 (332)
...+.+..+...+.+++.+||+.||++|||+.+++..|..+..+|
T Consensus 228 --~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 228 --ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 111112223346889999999999999999999999999887653
No 36
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.3e-44 Score=322.49 Aligned_cols=242 Identities=21% Similarity=0.237 Sum_probs=208.3
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccc-cccHHHHHHHhccCCCCCccceeeeeecCCceeE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSLAQHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 136 (332)
..++|+.++.||+|+||.||.++ ..+|..+|+|++++....... ......|-.+|...++|+||+++-.|.+...+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 46899999999999999999999 679999999999987654433 3357888899999999999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
+|||++||++..++...+. +++..+..++.+++.|+.-+|.. |++||||||+|+|||..|.+||+|||++...
T Consensus 219 iMEylPGGD~mTLL~~~~~----L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDT----LTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHHhcCc----CchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 9999999999999976543 88899999999999999999999 9999999999999999999999999987210
Q ss_pred ---------------------------Cc--------------------------ccCCcccccCcccccccCCCCCCch
Q 020027 217 ---------------------------PE--------------------------EKRGLAGYVDDDYWHEKGGGNATRE 243 (332)
Q Consensus 217 ---------------------------~~--------------------------~~~~~~~~~~pe~~~~~~~~~~~~~ 243 (332)
+. +..||+.|+|||++.. ..|+..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~---kgY~~~ 368 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG---KGYGKE 368 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc---CCCCcc
Confidence 00 0158999999999988 668999
Q ss_pred hhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCC
Q 020027 244 SDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPS 317 (332)
Q Consensus 244 ~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs 317 (332)
+|.||+|||+|||+.|-+||.+..+.+++..+..-+ ..+..|.......++.++|.+|+. ||++|--
T Consensus 369 cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr------~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 369 CDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWR------ETLKFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred ccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh------hhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 999999999999999999999999999887776532 234445455555789999999999 9999964
No 37
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.3e-44 Score=325.37 Aligned_cols=243 Identities=22% Similarity=0.231 Sum_probs=200.9
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
.++|...+.||+|+||.||+|+. .+++.||+|.+....... .....+.+|+.+++.++||||+++++.+..++..+++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 46788899999999999999994 578999999987543222 2223578999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||+++++|.+++..... +++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++....
T Consensus 97 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGR----FPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred EcCCCCChHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 999999999999876432 78888889999999999999998 99999999999999999999999999987654
Q ss_pred cc---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 218 EE---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 218 ~~---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
+. ..|+..|+|||.+.. ..++.++|||||||++|||+||+.||.+.........+..+. +..+..
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~--------~~~p~~- 237 (329)
T PTZ00263 170 DRTFTLCGTPEYLAPEVIQS---KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR--------LKFPNW- 237 (329)
T ss_pred CCcceecCChhhcCHHHHcC---CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC--------cCCCCC-
Confidence 33 357889999999876 567899999999999999999999998766555444444332 112211
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPS-----IVQVA 322 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs-----~~~i~ 322 (332)
...++.+++.+||+.||.+||+ +.+++
T Consensus 238 -~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 238 -FDGRARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred -CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 1236779999999999999997 56665
No 38
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.6e-44 Score=328.27 Aligned_cols=256 Identities=25% Similarity=0.371 Sum_probs=201.9
Q ss_pred HHhcCCCCCCceeeccCCeEEEEEEe------CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeee
Q 020027 57 DAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQ 129 (332)
Q Consensus 57 ~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 129 (332)
....++|...+.||+|+||.||+|.. .++..||+|.++.... ......+.+|+.+++.+ +||||+++++++.
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 34456789999999999999999962 3566899999875432 22233578899999999 8999999999999
Q ss_pred cCCceeEEEeccCCCCHHHHhcccCC------------------------------------------------------
Q 020027 130 APGERIIVSEFINMASLDFYLHENND------------------------------------------------------ 155 (332)
Q Consensus 130 ~~~~~~lv~e~~~~~~L~~~l~~~~~------------------------------------------------------ 155 (332)
..+..+++|||+++|+|.+++.....
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 99999999999999999999864321
Q ss_pred -----------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 156 -----------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 156 -----------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
....+++..++.++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRN 266 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence 011367888999999999999999998 999999999999999999999999999875432
Q ss_pred cc--------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHH-HHHHHhhhcccccccCCcC
Q 020027 219 EK--------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVK-WALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 219 ~~--------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~ 288 (332)
.. .++..|++||.... ..++.++|||||||++|||+| |..||.+.... .....+..+. .
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-~------- 335 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFN---CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGY-R------- 335 (375)
T ss_pred cccccccCCCCCCcceeChhHhcC---CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCc-c-------
Confidence 21 23456999998876 678999999999999999998 88888765332 2222222221 0
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
...+.....++.+++.+||+.||++|||+.|+++.|++.
T Consensus 336 -~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 336 -MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 011111234788999999999999999999999999875
No 39
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-44 Score=335.94 Aligned_cols=250 Identities=21% Similarity=0.384 Sum_probs=214.0
Q ss_pred CCCCceeeccCCeEEEEEE-eCCCC----EEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 63 FSHRRIIGQGRLGTVYAAL-LSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~-~~~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
....++||+|+||+||+|. ...|+ +||+|++..... .+...+++.|...|+.++|||+++++|+|..+. ..|+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~-~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS-PKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC-chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 3456789999999999998 44454 799998865432 334557899999999999999999999998776 7899
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
++|++.|+|.+|++.++.. +.....+.+..|||+||.|||.+ ++|||||..+|||+.....+||.|||+++...
T Consensus 776 tq~mP~G~LlDyvr~hr~~---igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDN---IGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHhcccchHHHHHHHhhcc---ccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 9999999999999987654 67788899999999999999999 99999999999999999999999999998765
Q ss_pred ccc--------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcC
Q 020027 218 EEK--------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 218 ~~~--------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (332)
... .-...|||-|.... ..++.++|||||||.+||++| |..|+.+...+++-+.++.+.
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~---~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge--------- 917 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRI---RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE--------- 917 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhc---cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc---------
Confidence 432 22356777777666 789999999999999999999 999999998888877666642
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccCC
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~~~ 332 (332)
+.++++-|...++.+|.+||..|++.||+|+++...+.++.+||
T Consensus 918 RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 918 RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 35556677789999999999999999999999999999998887
No 40
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.8e-44 Score=328.48 Aligned_cols=259 Identities=24% Similarity=0.375 Sum_probs=202.6
Q ss_pred HHHhcCCCCCCceeeccCCeEEEEEEe------CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeee
Q 020027 56 IDAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFS 128 (332)
Q Consensus 56 ~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 128 (332)
+....++|+..+.||+|+||.||+|.. .++..||+|.++..... .....+.+|+.+++.+ +|+||+++++++
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT-DEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH-HHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 344556899999999999999999873 23458999999754322 2223578899999999 899999999999
Q ss_pred ecCCceeEEEeccCCCCHHHHhcccCC-----------------------------------------------------
Q 020027 129 QAPGERIIVSEFINMASLDFYLHENND----------------------------------------------------- 155 (332)
Q Consensus 129 ~~~~~~~lv~e~~~~~~L~~~l~~~~~----------------------------------------------------- 155 (332)
...+..+++|||+++|+|.+++.....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 999999999999999999999854210
Q ss_pred -------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc--
Q 020027 156 -------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK-- 220 (332)
Q Consensus 156 -------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~-- 220 (332)
....+++..+++++.|++.||.|||++ +++||||||+||++++++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY 268 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce
Confidence 011367888999999999999999998 99999999999999999999999999986543221
Q ss_pred ------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCCC
Q 020027 221 ------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 221 ------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
.++..|+|||.... ..++.++|||||||++|||++ |+.||................. ....+
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~--------~~~~~ 337 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFD---CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGY--------QMSRP 337 (374)
T ss_pred eeccCCCCccceeCHHHhcC---CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHccc--------CccCC
Confidence 23457999998865 678999999999999999998 9999976543322211111111 11111
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 294 IKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
...+.++.+++.+||+.||++|||+.++++.|++++
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 111236889999999999999999999999999875
No 41
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=6.5e-44 Score=316.16 Aligned_cols=248 Identities=21% Similarity=0.271 Sum_probs=196.2
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.|...+.||+|+||.||++. ..+|+.||+|.+....... .....+.+|+.+++.++|+|++++++.+..++..+++||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 36778899999999999999 5689999999987544322 222346789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE- 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~- 218 (332)
|+++++|..++..... ..+++..+..++.|++.|+.|||+. +++||||||+|||+++++.+||+|||++.....
T Consensus 81 ~~~~g~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGN--PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred ecCCCcHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 9999999888764322 2378999999999999999999998 999999999999999999999999999876432
Q ss_pred ----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 219 ----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 219 ----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
...|+..|+|||.+.. ..++.++|||||||++|||++|+.||.+.........+... ........ +.
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~---~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~--~~ 226 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVINN---EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR----VKEDQEEY--SE 226 (285)
T ss_pred CeecCCCCCCCccCHhhhcC---CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH----hhcccccC--Cc
Confidence 2357899999999876 67899999999999999999999999764322111111110 00111111 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPS-----IVQVAT 323 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs-----~~~i~~ 323 (332)
.....+.+++.+||+.||++||+ ++++++
T Consensus 227 ~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 227 KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 12336779999999999999997 677765
No 42
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.7e-43 Score=312.82 Aligned_cols=252 Identities=27% Similarity=0.395 Sum_probs=204.4
Q ss_pred CCCCCCceeeccCCeEEEEEEeC-C-----CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLS-T-----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~-~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
++|+..+.||+|+||.||+|... . ...||+|.++.... ......+.+|+..++.++||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE-PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC-HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 46888899999999999999842 2 25799998864432 22223578999999999999999999999998999
Q ss_pred eEEEeccCCCCHHHHhcccCCC------------CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC
Q 020027 135 IIVSEFINMASLDFYLHENNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 202 (332)
+++|||+++++|.+++...... ...+++..++.++.|++.||.|||+. +++|+||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCC
Confidence 9999999999999999754211 13478889999999999999999998 99999999999999999
Q ss_pred CceEEccCCccccCCc--------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHH
Q 020027 203 FCARVCDYGLSFLAPE--------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALP 273 (332)
Q Consensus 203 ~~~kl~dfg~a~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~ 273 (332)
+.+||+|||++..... ...++..|+|||.... ..++.++|||||||++|||+| |..||.+....+...
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~ 237 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY---GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIE 237 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhcc---CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999865321 1234677999998866 678899999999999999998 999998876655544
Q ss_pred HhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
.+..... .+.+..++.++.+++.+||+.||++|||++||++.|+++
T Consensus 238 ~i~~~~~---------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 238 MIRSRQL---------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHcCCc---------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 4443221 112233445888999999999999999999999999864
No 43
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.1e-43 Score=307.81 Aligned_cols=245 Identities=21% Similarity=0.334 Sum_probs=200.6
Q ss_pred CCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
++|+..+.||+|+||.||++...++..+|+|.+..... ....+.+|+.++++++||||+++++++..++..+++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM---SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc---cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 45778889999999999999987888999998764322 123578899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK 220 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~ 220 (332)
+++++|.+++..... .+++..+..++.|++.||.|||++ +++||||+|+||++++++.+|++|||.++......
T Consensus 81 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 81 MENGCLLNYLRQRQG---KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred CCCCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 999999999875432 278999999999999999999998 99999999999999999999999999887543211
Q ss_pred -------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 221 -------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 221 -------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
.++..|++||.... ..++.++|+||||+++||+++ |+.||...........+..+.. ...+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~-------~~~~- 223 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNF---SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR-------LYRP- 223 (256)
T ss_pred eeccCCCCCchhhCChhhccc---CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC-------CCCC-
Confidence 23457999999875 568899999999999999999 8999987655544444433211 0011
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
......+.+++.+||+.||++|||+.++++.|.
T Consensus 224 -~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 224 -KLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred -CCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 112246889999999999999999999999874
No 44
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.3e-44 Score=313.72 Aligned_cols=242 Identities=31% Similarity=0.446 Sum_probs=191.7
Q ss_pred CceeeccCCeEEEEEEeC-----CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 66 RRIIGQGRLGTVYAALLS-----TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
.+.||.|+||.||+|.+. .+..|+||.++... .......+.+|++.+++++||||++++|++...+..++++||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS-SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS-SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc-ccccceeeeecccccccccccccccccccccccccccccccc
Confidence 468999999999999964 35689999996532 222245689999999999999999999999988889999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc--
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-- 218 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~-- 218 (332)
+++|+|.+++..... ..+++..+..++.|++.||.|||++ +++|+||+++||++++++.+||+|||++.....
T Consensus 83 ~~~g~L~~~L~~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNK--EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp -TTEBHHHHHHHTCT--TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccccc--ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 999999999987621 2388999999999999999999998 999999999999999999999999999876521
Q ss_pred ------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 219 ------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
.......|++||.+.. ..++.++||||||+++||++| |+.||.+.........+.++.. .+
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~---~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~---------~~ 225 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKD---GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR---------LP 225 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHH---SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE---------TT
T ss_pred cccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccc---------ce
Confidence 1235668999999877 568999999999999999999 7789887765555555544321 11
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVATIL 325 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L 325 (332)
.+..++..+.+++.+||+.||++|||+.++++.|
T Consensus 226 ~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1222344788999999999999999999999986
No 45
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.5e-43 Score=318.93 Aligned_cols=255 Identities=21% Similarity=0.258 Sum_probs=200.2
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|+..+.||+|+||.||++. ..+|..+|+|.+..... ......+.+|+.+++.++||||+++++++..++..+++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 4689999999999999999999 45788999999875422 122235789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... +++..+..++.|++.||.|||+. .+++||||||+||+++.++.+||+|||++....+
T Consensus 83 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 83 EHMDGGSLDQVLKEAKR----IPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred ecCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999999976432 78889999999999999999975 1699999999999999999999999999865432
Q ss_pred ----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccc------c------
Q 020027 219 ----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFS------E------ 282 (332)
Q Consensus 219 ----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~------~------ 282 (332)
...++..|+|||.+.. ..++.++|||||||++|||+||+.||......+....+...... .
T Consensus 157 ~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 157 SMANSFVGTRSYMSPERLQG---THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred cccccCCCCcCcCCHhHhcC---CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccc
Confidence 2357889999999875 67899999999999999999999999765443332221110000 0
Q ss_pred --------------------------ccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 283 --------------------------LLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 283 --------------------------~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
................++.+++.+||+.||++|||+.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000011123468899999999999999999999764
No 46
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.7e-44 Score=321.59 Aligned_cols=237 Identities=19% Similarity=0.262 Sum_probs=194.7
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMA 144 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 144 (332)
+.||+|+||.||+++ ..+|+.||+|.++...... .....+.+|+.+++.++||||+++++.+...+..+++|||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999998 4688999999997643322 22234678999999999999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc------
Q 020027 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE------ 218 (332)
Q Consensus 145 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~------ 218 (332)
+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~L~~~l~~~~~----~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 153 (323)
T cd05571 81 ELFFHLSRERV----FSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred cHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence 99999875432 78999999999999999999998 999999999999999999999999999865321
Q ss_pred ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHH
Q 020027 219 EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLV 298 (332)
Q Consensus 219 ~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (332)
...|+..|+|||.+.. ..++.++|||||||++|||+||+.||.+.........+.... ...+. ....
T Consensus 154 ~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~--------~~~p~--~~~~ 220 (323)
T cd05571 154 TFCGTPEYLAPEVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--------IRFPR--TLSP 220 (323)
T ss_pred ceecCccccChhhhcC---CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC--------CCCCC--CCCH
Confidence 2258899999999876 678899999999999999999999998765554444333221 11111 2233
Q ss_pred HHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 299 RLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 299 ~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
++.+++.+||+.||++|| ++.++++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 678999999999999999 7888864
No 47
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7.7e-43 Score=356.75 Aligned_cols=254 Identities=25% Similarity=0.439 Sum_probs=203.2
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
...|...+.||+|+||.||+|.. .++..||+|.+..... ....|++.+++++||||++++|++..++..++||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 35677888999999999999994 6899999998863221 1245688999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC-
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP- 217 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~- 217 (332)
||+++++|.++++. ++|.++..++.|+++||+|||+.+.++++|||+||+||+++.++.+++. ||.+....
T Consensus 763 Ey~~~g~L~~~l~~-------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~ 834 (968)
T PLN00113 763 EYIEGKNLSEVLRN-------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT 834 (968)
T ss_pred eCCCCCcHHHHHhc-------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc
Confidence 99999999999952 7899999999999999999997666799999999999999999888875 55543322
Q ss_pred -cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCch------hHHHHHHHhhhcccccccCCcCCC
Q 020027 218 -EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGL------LVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 218 -~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
....++..|+|||+... ..++.++|||||||++|||+||+.||... ..++..............++.+..
T Consensus 835 ~~~~~~t~~y~aPE~~~~---~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (968)
T PLN00113 835 DTKCFISSAYVAPETRET---KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG 911 (968)
T ss_pred CCCccccccccCcccccC---CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccC
Confidence 22357789999999876 67899999999999999999999998532 122222222222233344554422
Q ss_pred --CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 291 --PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 291 --~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
+.+.++..++.+++.+||+.||++||||+|+++.|+++..
T Consensus 912 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 912 DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred CCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 2344566788899999999999999999999999998764
No 48
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=8.7e-44 Score=322.23 Aligned_cols=252 Identities=18% Similarity=0.181 Sum_probs=204.3
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||+|+. .+++.||+|.++...... .....+.+|+.++..++||||+++++.+...+..+++|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 3688899999999999999995 578999999997653322 22235788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... +++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~~----l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLGV----LSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999975432 78889999999999999999998 999999999999999999999999999876533
Q ss_pred ---ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 219 ---EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 219 ---~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
...|+..|+|||.+.. ..++.++|||||||++|||++|..||.+....+....+.... ..............
T Consensus 154 ~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~ 228 (333)
T cd05600 154 YANSVVGSPDYMAPEVLRG---KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWK--ETLQRPVYDDPRFN 228 (333)
T ss_pred ccCCcccCccccChhHhcC---CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcc--ccccCCCCCccccc
Confidence 3468899999999876 578899999999999999999999998776655544443211 11111000000112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 296 PLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
...++.+++.+||+.+|++|||+.++++.
T Consensus 229 ~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 229 LSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 24478899999999999999999999863
No 49
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-44 Score=312.69 Aligned_cols=247 Identities=21% Similarity=0.293 Sum_probs=215.0
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccccc-ccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAG-FGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~-~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
....+|++.+.||+|+||+|-++. ...|+.||||.++++...+.+. ..+.+||.+|+.++||||+.++.+|+..+...
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv 129 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV 129 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence 345678899999999999999998 6899999999999877655443 35789999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
|||||..+|.|++|+.+.+. +++..+.+++.||..|+.|+|.+ +++|||||.+|||+|.|+++||+|||++-.
T Consensus 130 ivMEYaS~GeLYDYiSer~~----LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNl 202 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISERGS----LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNL 202 (668)
T ss_pred EEEEecCCccHHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhh
Confidence 99999999999999987654 89999999999999999999999 999999999999999999999999999976
Q ss_pred CCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 216 APEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 216 ~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
.... .+|.+-|.+||...+. ..-.+.+|.||+|++||.|+.|.-||+|.........+..+.+.+.-.|
T Consensus 203 y~~~kfLqTFCGSPLYASPEIvNG~--PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~P---- 276 (668)
T KOG0611|consen 203 YADKKFLQTFCGSPLYASPEIVNGT--PYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPETP---- 276 (668)
T ss_pred hccccHHHHhcCCcccCCccccCCC--CCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCCC----
Confidence 5543 3789999999998763 3346899999999999999999999999988888777777755442111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
.....||++++-.||++|-|+.+|...
T Consensus 277 -------SdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 277 -------SDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred -------chHHHHHHHHHhcCcccchhHHHHhhh
Confidence 145678999999999999999998763
No 50
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.8e-43 Score=309.12 Aligned_cols=250 Identities=20% Similarity=0.361 Sum_probs=205.2
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
..++|+..+.||+|+||.||+|...+++.||+|.+..... ....+.+|+.+++.++|+||+++++.+...+..++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 4567888999999999999999987888999998865322 2235788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +++||||||+||++++++.++++|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 81 EYMAKGSLLDFLKSDEG--GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred ecCCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCC
Confidence 99999999999975432 2378888999999999999999998 999999999999999999999999999976543
Q ss_pred cc-------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 219 EK-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ~~-------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
.. .++..|++||+... ..++.++|||||||++|||+| |..||.+.........+.... ..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~---------~~ 223 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINF---GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY---------RM 223 (261)
T ss_pred CceeccCCCccceecCCHHHhcc---CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC---------CC
Confidence 21 24557999998865 668889999999999999999 999997765544444333221 11
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
+.....+..+.+++.+||+.||++|||++++.+.|+++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 11122334678999999999999999999999999864
No 51
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.5e-43 Score=308.66 Aligned_cols=249 Identities=24% Similarity=0.340 Sum_probs=203.7
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
..+|...+.||+|+||.||+|. .++++.||+|.+.... .....+.+|+..++.++|+|++++++++..++..+++|
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 3457788899999999999999 4578899999886432 12235788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... ..+++..++.++.|+++||+|||++ +++||||||+||++++++.+|++|||++....+
T Consensus 82 e~~~~~~L~~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 82 EFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred EeCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 99999999999875432 2378999999999999999999998 999999999999999999999999999876543
Q ss_pred cc-------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 219 EK-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ~~-------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
.. ..+..|++||.... ..++.++|||||||++|||+| |..||.+.........+... ...
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~---------~~~ 224 (263)
T cd05052 157 DTYTAHAGAKFPIKWTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG---------YRM 224 (263)
T ss_pred ceeeccCCCCCccccCCHHHhcc---CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC---------CCC
Confidence 21 23457999998765 678899999999999999998 89999876555444433321 111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
+.+...+.++.+++.+||+.||++|||+.++++.|+.+
T Consensus 225 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11222334788999999999999999999999999875
No 52
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.2e-43 Score=311.82 Aligned_cols=253 Identities=18% Similarity=0.196 Sum_probs=196.4
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|...+.||+|+||.||+++. .+++.||+|.++...........+.+|+.+++.++||||+++++++..++..+++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 4688899999999999999995 578899999997654333333457889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|++++++..+.... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEEMP----NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 99987776554332 1278899999999999999999998 9999999999999999999999999998764321
Q ss_pred -------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc--c-----------
Q 020027 220 -------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM--R----------- 279 (332)
Q Consensus 220 -------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~----------- 279 (332)
..++..|+|||.... ..++.++|||||||++|||++|+.||.+.........+... .
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLG---APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred ccccccccccccccCCcHHHcC---CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence 247888999999865 56889999999999999999999999765432222111110 0
Q ss_pred ---cccccCCcCCCCCC------hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 ---FSELLDPRLAIPCE------IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 ---~~~~~~~~~~~~~~------~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
......+....+.. ......+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000000 012346889999999999999999999875
No 53
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3e-43 Score=312.32 Aligned_cols=254 Identities=23% Similarity=0.270 Sum_probs=197.3
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|...+.||+|+||.||+|+ ..+++.||+|.++.... ......+.+|+.+++.++||||+++++++..++..+++|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 3568899999999999999999 45789999999875432 222234678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||++ ++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 83 e~~~-~~l~~~l~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~ 155 (288)
T cd07871 83 EYLD-SDLKQYLDNCGN---LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSV 155 (288)
T ss_pred eCCC-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence 9997 489888865432 268888999999999999999998 999999999999999999999999999865322
Q ss_pred ------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------ccc----
Q 020027 219 ------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-------RFS---- 281 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-------~~~---- 281 (332)
...++..|+|||.+... ..++.++||||+||++|||+||+.||.+....+....+... .+.
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07871 156 PTKTYSNEVVTLWYRPPDVLLGS--TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS 233 (288)
T ss_pred CCccccCceecccccChHHhcCC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcccc
Confidence 22467889999987642 56789999999999999999999999876554443322110 000
Q ss_pred -----cccCCcCCCCC----ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 282 -----ELLDPRLAIPC----EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 282 -----~~~~~~~~~~~----~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...-+...... ......++.+++.+|++.||.+|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00001100000 0112236779999999999999999999875
No 54
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=5.7e-43 Score=306.85 Aligned_cols=251 Identities=24% Similarity=0.401 Sum_probs=204.7
Q ss_pred cCCCCCCceeeccCCeEEEEEEeC----CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLS----TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
.++|+..+.||+|+||.||+|... +...||+|.++.... ......+.+|+..++.++||||+++++++...+..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS-DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 457889999999999999999853 245899998865432 222345788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++|||+++++|.+++..... .+++..++.++.|++.|+.|||++ +++|+||||+||++++++.++++|||++..
T Consensus 82 iv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 82 IITEYMENGSLDKFLRENDG---KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred EEEEcCCCCCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 99999999999999976432 378999999999999999999998 999999999999999999999999999876
Q ss_pred CCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCC
Q 020027 216 APEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDP 286 (332)
Q Consensus 216 ~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 286 (332)
.... ..++..|++||.... ..++.++||||||+++||+++ |..||...........+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~---~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~------- 225 (266)
T cd05033 156 LEDSEATYTTKGGKIPIRWTAPEAIAY---RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY------- 225 (266)
T ss_pred ccccccceeccCCCCCccccChhhhcc---CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-------
Confidence 5311 123467999998875 678899999999999999998 999997655544444333221
Q ss_pred cCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 287 RLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 287 ~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
..+.+...+..+.+++.+||+.||++|||++++++.|++++
T Consensus 226 --~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 226 --RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred --CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 11112233447889999999999999999999999998864
No 55
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.9e-43 Score=308.83 Aligned_cols=252 Identities=25% Similarity=0.417 Sum_probs=207.9
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
....+|...+.||.|+||.||+|...+++.+|+|.+...... ....+..|+.+++.++|+|++++++++...+..+++
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLL--KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchh--hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 345678889999999999999999777999999998754321 223578899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||+++++|.+++..... ..+++.++..++.|++.|+.|||++ +++|+||+|+||++++++.+|++|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~ 155 (261)
T cd05148 81 TELMEKGSLLAFLRSPEG--QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIK 155 (261)
T ss_pred EeecccCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcC
Confidence 999999999999976432 2378999999999999999999998 99999999999999999999999999986543
Q ss_pred cc------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 218 EE------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 218 ~~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
.. ..++..|++||.... ..++.++||||||+++|++++ |+.||.+....+....+... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~PE~~~~---~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~---------~~~ 223 (261)
T cd05148 156 EDVYLSSDKKIPYKWTAPEAASH---GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG---------YRM 223 (261)
T ss_pred CccccccCCCCceEecCHHHHcc---CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC---------CcC
Confidence 32 134567999998765 678899999999999999998 88999876655554444321 111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
+.+......+.+++.+||+.||++|||++++++.|+++
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 224 PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 22233345788999999999999999999999999864
No 56
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.8e-43 Score=305.48 Aligned_cols=250 Identities=24% Similarity=0.389 Sum_probs=205.5
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
..++|...+.||+|+||.||+|...+++.||+|.++.... ....+.+|+..+++++|+|++++++++...+..+++|
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 4566888899999999999999977778999999875432 2235788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++.... ...+++..+..++.|++.|+.|||+. +++|+||||+||++++++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 81 ELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred ecccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 9999999999997643 22378999999999999999999998 999999999999999999999999999875542
Q ss_pred cc----CC---cccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 219 EK----RG---LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ~~----~~---~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
.. .+ +..|++||.... ..++.++|+||||+++|||+| |+.||.+.........+.... ..
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---------~~ 223 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALY---NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY---------RM 223 (261)
T ss_pred CcccccCCCcCceeccCcccccc---CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---------CC
Confidence 21 12 346999998765 678899999999999999999 999998765554444333211 11
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
+.+......+.+++.+||+.||++||++.++.+.|+++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 224 PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 11222334788999999999999999999999999864
No 57
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=7.2e-43 Score=308.49 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=199.2
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCC----EEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
++|...+.||+|+||.||+|.. .+++ .+++|.+..... .....++..|+..++.++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-RQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc-hHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccE
Confidence 4678889999999999999984 4555 477777643211 1122346677788899999999999999864 4567
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
+++||+++++|.+++..... .+++..+..++.|++.||.|||++ +++||||||+||++++++.+|++|||+++.
T Consensus 85 ~i~e~~~~gsL~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHRD---SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEEeCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 89999999999999975432 378999999999999999999998 999999999999999999999999999875
Q ss_pred CCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCC
Q 020027 216 APEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDP 286 (332)
Q Consensus 216 ~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 286 (332)
.... ..++..|++||.... ..++.++|||||||++||++| |..||.+.........+..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~---~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~------ 229 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILF---GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGER------ 229 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhcc---CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc------
Confidence 4321 135568999998875 678999999999999999998 9999987655544343333211
Q ss_pred cCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccCC
Q 020027 287 RLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332 (332)
Q Consensus 287 ~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~~~ 332 (332)
+ +.+..+...+.+++.+||+.||++|||+.|+++.|..+..||
T Consensus 230 -~--~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 230 -L--AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred -C--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 1 111122346778999999999999999999999999988765
No 58
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-43 Score=300.97 Aligned_cols=257 Identities=19% Similarity=0.183 Sum_probs=203.1
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC--Cce
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GER 134 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 134 (332)
.+.++|+..+.|++|+||.||+|+ .++++.||+|+++.+.....-....++||.++.+.+|||||.+..+.... +..
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 455679999999999999999999 67899999999987653333233468999999999999999999988654 579
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
|+|||||+ -+|...+.... ..+...++.-++.|++.|++|||.+ .|+|||||++|+|+++.|.+||+|||+|+
T Consensus 153 y~VMe~~E-hDLksl~d~m~---q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 153 YIVMEYVE-HDLKSLMETMK---QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAR 225 (419)
T ss_pred eeeHHHHH-hhHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhh
Confidence 99999997 48988887654 2378888999999999999999999 99999999999999999999999999999
Q ss_pred cCCccc------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh--c-----ccc
Q 020027 215 LAPEEK------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE--M-----RFS 281 (332)
Q Consensus 215 ~~~~~~------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~--~-----~~~ 281 (332)
...+.. .-|.-|.|||.+.+. ..|+++.|+||+|||+.|++++++.|.|...-+..+.+-. + .|.
T Consensus 226 ~ygsp~k~~T~lVVTLWYRaPELLLG~--~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwp 303 (419)
T KOG0663|consen 226 EYGSPLKPYTPLVVTLWYRAPELLLGA--KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWP 303 (419)
T ss_pred hhcCCcccCcceEEEeeecCHHHhcCC--cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCC
Confidence 876653 357789999999875 7899999999999999999999998887654443333211 1 111
Q ss_pred cccCCc----C---CCCCC-------h-HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 282 ELLDPR----L---AIPCE-------I-KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 282 ~~~~~~----~---~~~~~-------~-~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...... . ..+.+ . ...+.-++++...+.+||.+|-|++|.+.
T Consensus 304 g~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 304 GYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred CccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 100000 0 01110 0 12346779999999999999999998764
No 59
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.5e-43 Score=333.87 Aligned_cols=255 Identities=19% Similarity=0.235 Sum_probs=205.9
Q ss_pred HHHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC-
Q 020027 55 EIDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG- 132 (332)
Q Consensus 55 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~- 132 (332)
+.....++|...+.||+|+||.||+++ ..+|+.||+|.+............+.+|+..+..++|+|++++++.+...+
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 334456789999999999999999998 568999999999765443333445788999999999999999987764322
Q ss_pred -------ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCce
Q 020027 133 -------ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCA 205 (332)
Q Consensus 133 -------~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 205 (332)
..+++|||+++|+|.+++.........+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLV 182 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCE
Confidence 36799999999999999976543344588999999999999999999998 99999999999999999999
Q ss_pred EEccCCccccCCc--------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh
Q 020027 206 RVCDYGLSFLAPE--------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE 277 (332)
Q Consensus 206 kl~dfg~a~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~ 277 (332)
||+|||+++.... ...||+.|+|||.+.. ..++.++|||||||++|||++|+.||.+............
T Consensus 183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~---~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~ 259 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR---KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA 259 (496)
T ss_pred EEEecccCeeccccccccccccccCCcceeCHHHhCC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc
Confidence 9999999865432 2357899999999876 6789999999999999999999999987765555444333
Q ss_pred cccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 278 MRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
+... +.+.....++.+++.+||+.||++|||+.++++.
T Consensus 260 ~~~~---------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 260 GRYD---------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 2211 1112223478899999999999999999998763
No 60
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.5e-43 Score=306.94 Aligned_cols=254 Identities=21% Similarity=0.266 Sum_probs=203.8
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||+|+ ..+++.||+|.++...... .....+.+|+.+++.++|||++++++++...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 578899999999999999999 4588999999886533222 22335788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++.........++...++.++.|++.||.|||++ +++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999998865433333478889999999999999999998 999999999999999999999999999876443
Q ss_pred ------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH--HHHHHHhhhcccccccCCcCCC
Q 020027 219 ------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV--KWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
...++..|++||.+.. ..++.++|+||||+++|||++|+.||..... ......+..... +.
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~---~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~--- 227 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHE---NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDY-----PP--- 227 (267)
T ss_pred hhHHHhcCCCCccccChhhhcc---CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCC-----CC---
Confidence 2246778999998875 5678899999999999999999999865322 122122211111 11
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
.........+.+++.+||+.+|++|||+.++++.|+++
T Consensus 228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 228 LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 11112334688999999999999999999999999876
No 61
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=334.89 Aligned_cols=258 Identities=21% Similarity=0.235 Sum_probs=214.5
Q ss_pred HHHhcCCCCCCceeeccCCeEEEEEEeCC-CCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeee-ee---
Q 020027 56 IDAATDGFSHRRIIGQGRLGTVYAALLST-GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGF-SQ--- 129 (332)
Q Consensus 56 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~-~~--- 129 (332)
+.+...++.+.+.|.+|||+.||.+.... |..+|+|++... .........+||.+|++|+ |+|||.+++. ..
T Consensus 32 ~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~ 109 (738)
T KOG1989|consen 32 FTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRS 109 (738)
T ss_pred EEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEecccccccc
Confidence 34455677888999999999999999544 499999998755 2333445789999999996 9999999993 21
Q ss_pred cC---CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceE
Q 020027 130 AP---GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCAR 206 (332)
Q Consensus 130 ~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 206 (332)
.. -+++|.||||++|.|-++++...... +++..+++|+.|+++|+++||.. .++|+|||||.+|||++.++..|
T Consensus 110 ~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~--lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~K 186 (738)
T KOG1989|consen 110 SNNGVWEVLLLMEYCKGGSLVDFMNTRLQTR--LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYK 186 (738)
T ss_pred CCCceeEEEeehhhccCCcHHHHHHHHHhcc--CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEE
Confidence 11 35689999999999999998644332 89999999999999999999985 77899999999999999999999
Q ss_pred EccCCccccCCc---c------------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHH
Q 020027 207 VCDYGLSFLAPE---E------------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWA 271 (332)
Q Consensus 207 l~dfg~a~~~~~---~------------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~ 271 (332)
|||||.+..... . ...|+.|++||.+.--.+..+++|+|||||||+||.|+....||.+.
T Consensus 187 LCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s----- 261 (738)
T KOG1989|consen 187 LCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES----- 261 (738)
T ss_pred eCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC-----
Confidence 999998743211 1 13689999999998777789999999999999999999999999763
Q ss_pred HHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 272 LPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
.-..++...+..|........+.+||..||+.||++||++-+++..+.++..
T Consensus 262 -------g~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 262 -------GKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred -------cceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 1223455667777777888899999999999999999999999999988764
No 62
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.5e-43 Score=317.89 Aligned_cols=231 Identities=24% Similarity=0.247 Sum_probs=189.0
Q ss_pred eeccCCeEEEEEEe-CCCCEEEEEEeccCccc-ccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCH
Q 020027 69 IGQGRLGTVYAALL-STGKLVAVKRIHPRLVL-SNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASL 146 (332)
Q Consensus 69 lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 146 (332)
||+|+||.||+++. .+++.||+|.++..... ......+.+|+.+++.++||||+++++++..++..+++|||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999994 57889999998754322 22223567899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc------cc
Q 020027 147 DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE------EK 220 (332)
Q Consensus 147 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~------~~ 220 (332)
.+++..... +++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++.... ..
T Consensus 81 ~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 153 (312)
T cd05585 81 FHHLQREGR----FDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTF 153 (312)
T ss_pred HHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccc
Confidence 999976432 78899999999999999999998 999999999999999999999999999875321 22
Q ss_pred CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHH
Q 020027 221 RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRL 300 (332)
Q Consensus 221 ~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (332)
.||..|+|||.+.. ..++.++|||||||++|||+||+.||.+.........+.... ...+. .....+
T Consensus 154 ~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~ 220 (312)
T cd05585 154 CGTPEYLAPELLLG---HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP--------LRFPD--GFDRDA 220 (312)
T ss_pred cCCcccCCHHHHcC---CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC--------CCCCC--cCCHHH
Confidence 58899999999876 678999999999999999999999998765554443333221 11111 122367
Q ss_pred HHHHHHcccCCCCCCCCHH
Q 020027 301 AKVALACVGNSRKNRPSIV 319 (332)
Q Consensus 301 ~~l~~~c~~~dp~~RPs~~ 319 (332)
.+++.+||+.||++||++.
T Consensus 221 ~~li~~~L~~dp~~R~~~~ 239 (312)
T cd05585 221 KDLLIGLLSRDPTRRLGYN 239 (312)
T ss_pred HHHHHHHcCCCHHHcCCCC
Confidence 7999999999999998643
No 63
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=9e-44 Score=297.31 Aligned_cols=237 Identities=19% Similarity=0.240 Sum_probs=205.7
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 136 (332)
..++|+..+.||.|+||+|..++ ..+|..+|+|++++...-. .+.....+|..+++.+.||.++++++.+.+.+..++
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence 45689999999999999999999 5688999999998655432 233346889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
+|||.+||.|..+++..++ +++..+..++.||+.|++|||+. +|++|||||+|||+|.+|.+||+|||+|+..
T Consensus 122 vmeyv~GGElFS~Lrk~~r----F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v 194 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRKSGR----FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRV 194 (355)
T ss_pred EEeccCCccHHHHHHhcCC----CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence 9999999999999987655 89999999999999999999999 9999999999999999999999999999876
Q ss_pred Ccc---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCC
Q 020027 217 PEE---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 217 ~~~---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
... .+||+.|+|||..+. ..++.++|.|||||++|||+.|.+||.+..+..++..+.++. +..|..
T Consensus 195 ~~rT~TlCGTPeYLAPEii~s---k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~--------v~fP~~ 263 (355)
T KOG0616|consen 195 SGRTWTLCGTPEYLAPEIIQS---KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK--------VKFPSY 263 (355)
T ss_pred cCcEEEecCCccccChHHhhc---CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc--------ccCCcc
Confidence 654 389999999999988 789999999999999999999999999887777777776653 233322
Q ss_pred hHHHHHHHHHHHHcccCCCCCC
Q 020027 294 IKPLVRLAKVALACVGNSRKNR 315 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~R 315 (332)
.. ..+.+|+...++.|-.+|
T Consensus 264 fs--~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 264 FS--SDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cC--HHHHHHHHHHHhhhhHhh
Confidence 22 256688999999998888
No 64
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.3e-42 Score=305.31 Aligned_cols=251 Identities=23% Similarity=0.315 Sum_probs=197.7
Q ss_pred CCCceeeccCCeEEEEEEeC-CCC--EEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC------Cce
Q 020027 64 SHRRIIGQGRLGTVYAALLS-TGK--LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP------GER 134 (332)
Q Consensus 64 ~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~ 134 (332)
...+.||+|+||.||+|... ++. .+|+|.++...........+.+|+.+++.++|+||+++++.+... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 45678999999999999954 333 689998876543333344578899999999999999999987432 346
Q ss_pred eEEEeccCCCCHHHHhcccC--CCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCc
Q 020027 135 IIVSEFINMASLDFYLHENN--DGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~ 212 (332)
++++||+++++|.+++.... .....+++.....++.|++.||+|||++ +++||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 89999999999998874322 1223478999999999999999999998 999999999999999999999999999
Q ss_pred cccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccc
Q 020027 213 SFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSEL 283 (332)
Q Consensus 213 a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 283 (332)
++..... ..++..|++||.... ..++.++||||||+++||+++ |+.||.+.........+..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--- 232 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLAD---RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR--- 232 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccC---CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC---
Confidence 8764322 124567899998765 678999999999999999999 7889987655555454443221
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 284 LDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
. +.+......+.+++.+||+.||++|||+.++++.|++++
T Consensus 233 ----~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 272 (272)
T cd05075 233 ----L--KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKAL 272 (272)
T ss_pred ----C--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 1 111223346789999999999999999999999998763
No 65
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.5e-43 Score=316.85 Aligned_cols=237 Identities=20% Similarity=0.273 Sum_probs=193.6
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMA 144 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 144 (332)
+.||+|+||.||+++ ..+|+.||+|.++...... .....+.+|+.+++.++||||+++++.+...+..+++|||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 469999999999999 4688999999997643322 22234678999999999999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc------
Q 020027 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE------ 218 (332)
Q Consensus 145 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~------ 218 (332)
+|..++..... +++..+..++.|++.||.|||++ +++||||||+|||+++++.+||+|||++.....
T Consensus 81 ~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 153 (323)
T cd05595 81 ELFFHLSRERV----FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred cHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence 99988865432 78999999999999999999998 999999999999999999999999998864321
Q ss_pred ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHH
Q 020027 219 EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLV 298 (332)
Q Consensus 219 ~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (332)
...|+..|+|||.... ..++.++|||||||++|||++|+.||.+.........+.... ...+.. ...
T Consensus 154 ~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~--------~~~p~~--~~~ 220 (323)
T cd05595 154 TFCGTPEYLAPEVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--------IRFPRT--LSP 220 (323)
T ss_pred cccCCcCcCCcccccC---CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--------CCCCCC--CCH
Confidence 2257899999999865 678899999999999999999999998765554444333221 111111 223
Q ss_pred HHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 299 RLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 299 ~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
.+.+++.+||+.||++|| ++.++++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 221 EAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 677999999999999998 7887764
No 66
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.6e-43 Score=308.30 Aligned_cols=254 Identities=21% Similarity=0.325 Sum_probs=203.0
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP 131 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 131 (332)
...++|+..+.||+|+||.||+|... ++..||+|.+..... ......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 35677999999999999999998742 356899998854321 12233578999999999999999999999998
Q ss_pred CceeEEEeccCCCCHHHHhcccCCC------CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCce
Q 020027 132 GERIIVSEFINMASLDFYLHENNDG------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCA 205 (332)
Q Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 205 (332)
+..+++|||+++++|.+++...... ...+++..++.++.|++.|+.|||+. +++|+||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCE
Confidence 9999999999999999998653221 12357888999999999999999998 99999999999999999999
Q ss_pred EEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhh
Q 020027 206 RVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIK 276 (332)
Q Consensus 206 kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~ 276 (332)
+++|||+++..... ..++..|+|||.+.. ..++.++|||||||++|||++ |..||.+.........+.
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM 235 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhc---CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 99999998654221 134567999999875 678999999999999999999 788988765555544443
Q ss_pred hcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 277 EMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
...... .+......+.+++.+||+.||++|||+.|+++.|++
T Consensus 236 ~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 236 EGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred cCCcCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 322111 111233478899999999999999999999999874
No 67
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.8e-43 Score=317.24 Aligned_cols=237 Identities=19% Similarity=0.274 Sum_probs=194.3
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMA 144 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 144 (332)
+.||+|+||.||+++ ..+|+.||+|.+....... .....+.+|+.+++.++||||+++++++...+..+++|||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999999 5689999999997653322 22235678999999999999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc------
Q 020027 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE------ 218 (332)
Q Consensus 145 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~------ 218 (332)
+|..++..... +++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 153 (328)
T cd05593 81 ELFFHLSRERV----FSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK 153 (328)
T ss_pred CHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence 99988865432 78999999999999999999998 999999999999999999999999999865321
Q ss_pred ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHH
Q 020027 219 EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLV 298 (332)
Q Consensus 219 ~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (332)
...|+..|+|||.+.. ..++.++|||||||++|||++|+.||.+.........+.... ...+.. ...
T Consensus 154 ~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~--------~~~p~~--~~~ 220 (328)
T cd05593 154 TFCGTPEYLAPEVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED--------IKFPRT--LSA 220 (328)
T ss_pred cccCCcCccChhhhcC---CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC--------ccCCCC--CCH
Confidence 1257899999999875 678899999999999999999999998765544433332211 111111 223
Q ss_pred HHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 299 RLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 299 ~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
++.+++.+||+.||++|| ++.++++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 677999999999999997 8888875
No 68
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.6e-43 Score=318.46 Aligned_cols=258 Identities=25% Similarity=0.404 Sum_probs=201.8
Q ss_pred hcCCCCCCceeeccCCeEEEEEEe------CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecC
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAP 131 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 131 (332)
..++|...+.||+|+||.||+|.. .+++.||+|+++.... ......+..|+.++.++ +|+||+++++++...
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT-ASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC-HHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 345789999999999999999962 2457899999874332 22223467899999999 899999999988654
Q ss_pred -CceeEEEeccCCCCHHHHhcccCCC------------------------------------------------------
Q 020027 132 -GERIIVSEFINMASLDFYLHENNDG------------------------------------------------------ 156 (332)
Q Consensus 132 -~~~~lv~e~~~~~~L~~~l~~~~~~------------------------------------------------------ 156 (332)
...++++||+++++|.+++......
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 5688999999999999998643210
Q ss_pred ---CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc--------cCCccc
Q 020027 157 ---ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE--------KRGLAG 225 (332)
Q Consensus 157 ---~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~--------~~~~~~ 225 (332)
...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.++|+|||+++..... ..++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 12478899999999999999999998 9999999999999999999999999998754221 234567
Q ss_pred ccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHH-HHhhhcccccccCCcCCCCCChHHHHHHHHH
Q 020027 226 YVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWAL-PLIKEMRFSELLDPRLAIPCEIKPLVRLAKV 303 (332)
Q Consensus 226 ~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 303 (332)
|+|||+... ..++.++|||||||++|||++ |..||.+....+.. ..+.... . ...+.....++.++
T Consensus 241 y~aPE~~~~---~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~l 308 (337)
T cd05054 241 WMAPESIFD---KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT-R--------MRAPEYATPEIYSI 308 (337)
T ss_pred ccCcHHhcC---CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccC-C--------CCCCccCCHHHHHH
Confidence 999998876 678999999999999999998 99999764433222 2222111 0 01111223478899
Q ss_pred HHHcccCCCCCCCCHHHHHHHHhccccCC
Q 020027 304 ALACVGNSRKNRPSIVQVATILNNLVGDP 332 (332)
Q Consensus 304 ~~~c~~~dp~~RPs~~~i~~~L~~~~~~~ 332 (332)
+.+||+.+|++|||+.|+++.|++++.++
T Consensus 309 ~~~cl~~~p~~RPs~~ell~~l~~~~~~~ 337 (337)
T cd05054 309 MLDCWHNNPEDRPTFSELVEILGDLLQEN 337 (337)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999988654
No 69
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.5e-43 Score=319.72 Aligned_cols=245 Identities=20% Similarity=0.187 Sum_probs=200.5
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeC-C-CCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLS-T-GKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
..++|...+.||+|+||.||+|... + +..||+|.+....... .....+.+|+.+++.++||||+++++++..++..+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 4567899999999999999999843 3 3689999986543222 22235678999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++|||+++++|.+++..... +++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++..
T Consensus 108 lv~Ey~~~g~L~~~i~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNKR----FPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKV 180 (340)
T ss_pred EEEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCee
Confidence 99999999999999976533 78899999999999999999998 999999999999999999999999999876
Q ss_pred CCc---ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 216 APE---EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 216 ~~~---~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
... ...||+.|+|||.+.. ..++.++|||||||++|||+||..||.+.........+..+.. ..+.
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~--------~~p~ 249 (340)
T PTZ00426 181 VDTRTYTLCGTPEYIAPEILLN---VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII--------YFPK 249 (340)
T ss_pred cCCCcceecCChhhcCHHHHhC---CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC--------CCCC
Confidence 543 2358899999999876 5678999999999999999999999988765555444443221 1111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
. ....+.+++.+||+.||++|+ |++++++
T Consensus 250 ~--~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 250 F--LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred C--CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 1 123567899999999999995 7888764
No 70
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.6e-42 Score=302.54 Aligned_cols=240 Identities=22% Similarity=0.336 Sum_probs=194.3
Q ss_pred eeeccCCeEEEEEEe---CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCC
Q 020027 68 IIGQGRLGTVYAALL---STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMA 144 (332)
Q Consensus 68 ~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 144 (332)
.||+|+||.||+|.+ .++..+|+|.++...........+.+|+.+++.++|+||+++++++.. +..+++|||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 589999999999963 467899999987554333333457889999999999999999999864 4578999999999
Q ss_pred CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc----
Q 020027 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK---- 220 (332)
Q Consensus 145 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~---- 220 (332)
+|.+++.... .+++..+..++.|++.|+.|||++ +++||||||+||++++++.+|++|||++.......
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQKNK----HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 9999996543 278899999999999999999998 99999999999999999999999999986543221
Q ss_pred -----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 221 -----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 221 -----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
.++..|++||.... ..++.++|+|||||++||++| |..||.+.........+..+.. .+.+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~---------~~~~~ 221 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNY---YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER---------MECPQ 221 (257)
T ss_pred ecCCCCCCccccCHhHhcc---CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC---------CCCCC
Confidence 12467999998765 567889999999999999998 9999987655555444443211 11112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
....++.+++.+||+.||++|||+++|.+.|++
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 233478899999999999999999999999986
No 71
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=9e-43 Score=309.40 Aligned_cols=254 Identities=19% Similarity=0.245 Sum_probs=192.0
Q ss_pred CCCCCCceeeccCCeEEEEEEe--CCCCEEEEEEeccCcccccccccHHHHHHHhccC---CCCCccceeeeee-----c
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL--STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA---QHPNIVPILGFSQ-----A 130 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~-----~ 130 (332)
++|...+.||+|+||.||+|+. .+++.||+|.++...........+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3688899999999999999984 3567899999876544333333456677766655 6999999999885 2
Q ss_pred CCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 131 PGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 131 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
....+++|||++ ++|.+++...... .+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEP--GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 456899999996 6898888654322 378999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCc-----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcc------
Q 020027 211 GLSFLAPE-----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMR------ 279 (332)
Q Consensus 211 g~a~~~~~-----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~------ 279 (332)
|++..... ...++..|+|||.+.. ..++.++|||||||++|||++|+.||.+....+....+.+..
T Consensus 155 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 155 GLARIYSFQMALTSVVVTLWYRAPEVLLQ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 231 (290)
T ss_pred cceEeccCCcccccccccccccChHHHhC---CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChh
Confidence 99875432 2247889999999865 678899999999999999999999998765444333322110
Q ss_pred -ccc-------ccCCcCCCC---CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 -FSE-------LLDPRLAIP---CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 -~~~-------~~~~~~~~~---~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.. ...+....+ ........+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000 000000000 00012235679999999999999999999875
No 72
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=8.6e-43 Score=321.88 Aligned_cols=259 Identities=27% Similarity=0.386 Sum_probs=204.1
Q ss_pred HHHhcCCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeeee
Q 020027 56 IDAATDGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGFS 128 (332)
Q Consensus 56 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 128 (332)
+....++|...+.||+|+||.||+|... ++..||+|.++.... ......+.+|+.+++.++ ||||+++++++
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-SSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 3345678899999999999999999831 234799999975432 222335789999999996 99999999999
Q ss_pred ecCCceeEEEeccCCCCHHHHhcccCC-----------------------------------------------------
Q 020027 129 QAPGERIIVSEFINMASLDFYLHENND----------------------------------------------------- 155 (332)
Q Consensus 129 ~~~~~~~lv~e~~~~~~L~~~l~~~~~----------------------------------------------------- 155 (332)
...+..+++|||+++|+|.+++.....
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 999999999999999999998865311
Q ss_pred ---------------------------------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCC
Q 020027 156 ---------------------------------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASN 196 (332)
Q Consensus 156 ---------------------------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 196 (332)
....+++..++.++.|++.||.|||+. +++||||||+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~N 267 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARN 267 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHh
Confidence 012367888899999999999999998 99999999999
Q ss_pred EEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchh
Q 020027 197 ILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLL 267 (332)
Q Consensus 197 ill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~ 267 (332)
|++++++.+|++|||+++..... ..++..|++||.+.. ..++.++|||||||++|||++ |..||.+..
T Consensus 268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwSlGvil~ellt~g~~P~~~~~ 344 (400)
T cd05105 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD---NLYTTLSDVWSYGILLWEIFSLGGTPYPGMI 344 (400)
T ss_pred EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC---CCCCchhhHHHHHHHHHHHHHCCCCCCcccc
Confidence 99999999999999998754321 134567999998865 678899999999999999997 889987653
Q ss_pred HHH-HHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 268 VKW-ALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 268 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
.+. ....+..+ ...+.+......+.+++.+||+.||++|||+.++.+.|+++..
T Consensus 345 ~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 345 VDSTFYNKIKSG---------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred hhHHHHHHHhcC---------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 322 22222221 1111122334578899999999999999999999999998764
No 73
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.4e-42 Score=302.83 Aligned_cols=245 Identities=20% Similarity=0.309 Sum_probs=199.4
Q ss_pred CCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
++|...+.||+|+||.||.|...++..+|+|.+..... ....+.+|+.++++++||||+++++++...+..+++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 45777889999999999999977777899999874432 123578999999999999999999999988889999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK 220 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~ 220 (332)
+++++|.+++..... .+++..++.++.|++.|+.|||+. +++|+||||+||++++++.+|++|||.++......
T Consensus 81 ~~~~~l~~~i~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 81 MSNGCLLNYLREHGK---RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred CCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 999999999875432 378999999999999999999998 99999999999999999999999999986543221
Q ss_pred -------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 221 -------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 221 -------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
.++..|++||.... ..++.++|||||||++|||+| |..||...........+..+.. . ..
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~---~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-------~--~~ 222 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLY---SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR-------L--YR 222 (256)
T ss_pred eeecCCCccChhhCCHHHHhc---CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC-------C--CC
Confidence 23457999998865 568899999999999999999 9999876554444333333211 0 01
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
+......+.+++.+||+.||++|||+.++++.|+
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 1112347889999999999999999999998874
No 74
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.6e-42 Score=309.80 Aligned_cols=254 Identities=22% Similarity=0.267 Sum_probs=193.7
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|...+.||+|+||.||+|+. .+++.||+|.++.... ......+.+|+.+++.++||||+++++++..++..+++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 46799999999999999999994 5789999999875432 222234678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||++ +++.+++..... .+++..+..++.|++.||.|||++ +|+||||||+||++++++.+||+|||++.....
T Consensus 83 e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 83 EYVH-TDLCQYMDKHPG---GLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred ECCC-cCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 9996 678777765432 278888999999999999999998 999999999999999999999999999864321
Q ss_pred ------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH-HHHHHHhhh--c-----ccccc-
Q 020027 219 ------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV-KWALPLIKE--M-----RFSEL- 283 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~-~~~~~~~~~--~-----~~~~~- 283 (332)
...++..|+|||.+... ..++.++||||+||++|||+||..||.+... ......+.. + .+...
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
T cd07869 156 PSHTYSNEVVTLWYRPPDVLLGS--TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVH 233 (303)
T ss_pred CCccCCCCcccCCCCChHHHcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchh
Confidence 23467889999987642 4578899999999999999999999976422 111111100 0 00000
Q ss_pred ----cC-CcCC--CCCCh-------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 284 ----LD-PRLA--IPCEI-------KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 284 ----~~-~~~~--~~~~~-------~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.. .... .+... .....+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 234 SLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00 0000 00000 01235679999999999999999999875
No 75
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.3e-43 Score=319.78 Aligned_cols=248 Identities=19% Similarity=0.241 Sum_probs=195.0
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|+..+.||+|+||+||++. ..+++.||+|.++...... .....+.+|+.++..++|+||+++++.+...+..+++|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 468889999999999999998 5578999999997543222 22234678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMKKDT----LTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999976432 78999999999999999999998 999999999999999999999999999864321
Q ss_pred -----------------------------------------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHH
Q 020027 219 -----------------------------------------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL 257 (332)
Q Consensus 219 -----------------------------------------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~ 257 (332)
...||..|+|||.+.. ..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~---~~~~~~~DvwSlGvil~ell 230 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ---TGYNKLCDWWSLGVIMYEML 230 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC---CCCCCchhhhhhHHHHHHHH
Confidence 1258899999999876 67889999999999999999
Q ss_pred hCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHH--cccCCCCCCCCHHHHHHH
Q 020027 258 SGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALA--CVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 258 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--c~~~dp~~RPs~~~i~~~ 324 (332)
+|+.||.+....+....+..... .+..+.......++.+++.+ |...++..||+++|+++.
T Consensus 231 ~G~~Pf~~~~~~~~~~~i~~~~~------~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 231 IGYPPFCSETPQETYKKVMNWKE------TLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred hCCCCCCCCCHHHHHHHHHcCcC------cccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 99999988766555544433211 11111111112245566655 333345567999998763
No 76
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-43 Score=321.12 Aligned_cols=244 Identities=23% Similarity=0.309 Sum_probs=211.3
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcc-cccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLV-LSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
+-|...+.||.|+-|.|-.|+ ..+|+.+|||.+.+... .......+.+||-+|+.+.|||++++++.++...++|++.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 346778899999999999999 67999999999987733 3334456899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++|-|.+++-..+. +++..+.+++.||..|+.|+|.. +|+||||||+|+|+|.++++||+|||+|....+
T Consensus 92 Eyv~gGELFdylv~kG~----l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGP----LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred EecCCchhHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 99999999999987654 78899999999999999999998 999999999999999999999999999976543
Q ss_pred -----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCC
Q 020027 219 -----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 219 -----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
..+|.+.|.+||...+. ...+.++||||.|||||.|+||+.||++......+..++.|.+. .|..
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~--pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~--------MPs~ 234 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGR--PYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFE--------MPSN 234 (786)
T ss_pred CccccccCCCcccCCchhhcCC--CCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCccc--------CCCc
Confidence 45899999999999874 45578999999999999999999999987777776666665432 2322
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 294 IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
. ..++.+|+.+++..||..|.|++||+.
T Consensus 235 I--s~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 235 I--SSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred C--CHHHHHHHHHHhccCccccccHHHHhh
Confidence 2 226779999999999999999999976
No 77
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.3e-43 Score=330.20 Aligned_cols=245 Identities=15% Similarity=0.185 Sum_probs=198.9
Q ss_pred CCCCCceeeccCCeEEEEEEe-CC-CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-ST-GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.|...+.||+|+||.||++.. .+ ++.||+|.+.... ......+.+|+.+++.++||||+++++++..++..+++||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 488889999999999999984 34 6788988765332 1222346789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+++++|.+++.+.......+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 9999999998865433233478889999999999999999998 9999999999999999999999999998754322
Q ss_pred --------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 220 --------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 220 --------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
..||..|+|||.+.. ..++.++|||||||++|||+||+.||.+.........+..+... +
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~---------~ 290 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWER---KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD---------P 290 (478)
T ss_pred cccccccccCCCccccCHhHhCC---CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---------C
Confidence 248899999999876 67899999999999999999999999876555444443332211 1
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+......+.+++.+||+.||++|||+.++++
T Consensus 291 ~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 11122346889999999999999999999874
No 78
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.3e-42 Score=306.83 Aligned_cols=257 Identities=21% Similarity=0.275 Sum_probs=206.2
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeCC-----CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec-C
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLST-----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA-P 131 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~ 131 (332)
...++|...+.||+|+||.||+|.... +..|++|.+.... .......+.+|+..++.++|+|++++++++.. +
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 456788899999999999999999644 6889999886432 22233457889999999999999999998765 4
Q ss_pred CceeEEEeccCCCCHHHHhcccCCC----CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEE
Q 020027 132 GERIIVSEFINMASLDFYLHENNDG----ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARV 207 (332)
Q Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl 207 (332)
...++++||+++++|.+++...... ...+++.+++.++.|++.||+|||++ +++|+||||+||++++++.+|+
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEE
Confidence 6789999999999999998764322 13488999999999999999999998 9999999999999999999999
Q ss_pred ccCCccccCCc--------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhc
Q 020027 208 CDYGLSFLAPE--------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEM 278 (332)
Q Consensus 208 ~dfg~a~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~ 278 (332)
+|||+++.... ...++..|++||.+.. ..++.++|||||||++||+++ |+.||.+.........+..+
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 235 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN---KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG 235 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhc---CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC
Confidence 99999975422 1234667999998865 568899999999999999999 99999876544443333322
Q ss_pred ccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 279 RFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
. ..+.+..++..+.+++.+||+.||++|||+.++++.|+.+..
T Consensus 236 ~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 236 Y---------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred C---------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1 111122233478899999999999999999999999998764
No 79
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.3e-42 Score=314.44 Aligned_cols=254 Identities=22% Similarity=0.288 Sum_probs=197.8
Q ss_pred hcCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
..++|+..+.||+|+||.||++.. .++..+|+|.+..... ......+.+|+++++.++|+||+++++++..++..+++
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 346899999999999999999994 4788999998875432 22223578999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||+++++|.+++..... +++.....++.|++.||.|||+. .+++||||||+||+++.++.+||+|||++....
T Consensus 82 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (333)
T ss_pred EecCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence 999999999999975432 78888999999999999999974 169999999999999999999999999986543
Q ss_pred c----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhh---hcccccc-------
Q 020027 218 E----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK---EMRFSEL------- 283 (332)
Q Consensus 218 ~----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~---~~~~~~~------- 283 (332)
. ...++..|+|||.+.. ..++.++|+|||||++||+++|+.||...........+. .+.....
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (333)
T cd06650 156 DSMANSFVGTRSYMSPERLQG---THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPR 232 (333)
T ss_pred hhccccCCCCccccCHHHhcC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccC
Confidence 2 2357889999999875 678899999999999999999999997654332221110 0000000
Q ss_pred --------cCC-------------------cCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 284 --------LDP-------------------RLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 284 --------~~~-------------------~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..+ ....+. .....++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 233 PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPS-GVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred CccchhhhhcccccccccHHHHHHHHhcCCCccCCC-CCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 000 000000 011246789999999999999999999964
No 80
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.7e-42 Score=307.46 Aligned_cols=254 Identities=25% Similarity=0.325 Sum_probs=204.9
Q ss_pred cCCCCCCceeeccCCeEEEEEEe------CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCc
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGE 133 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 133 (332)
.++|...+.||+|+||.||++.. .++..+|+|.+.... ......+.+|+.++++++|||++++++++...+.
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 46788899999999999999973 234578999886432 2223357899999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhcccCC---------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCc
Q 020027 134 RIIVSEFINMASLDFYLHENND---------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFC 204 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~---------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 204 (332)
.++++||+++++|.+++..... ....+++..++.++.|++.||+|||++ +++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 9999999999999999875431 123489999999999999999999998 9999999999999999999
Q ss_pred eEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHh
Q 020027 205 ARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLI 275 (332)
Q Consensus 205 ~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~ 275 (332)
+|++|||++...... ..++..|+|||.+.. ..++.++|||||||++|||+| |..||.+.........+
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i 235 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY---RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI 235 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 999999998754321 123567999998865 678899999999999999999 89998776555544444
Q ss_pred hhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 276 KEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
..+.... .+ ......+.+++.+||+.||.+|||+.++++.|+++..
T Consensus 236 ~~~~~~~-------~~--~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 236 TQGRVLQ-------RP--RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HcCCcCC-------CC--CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 4432111 11 1122368899999999999999999999999998753
No 81
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.4e-42 Score=303.60 Aligned_cols=252 Identities=23% Similarity=0.332 Sum_probs=200.2
Q ss_pred CCCCceeeccCCeEEEEEEeC----CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCc-----
Q 020027 63 FSHRRIIGQGRLGTVYAALLS----TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGE----- 133 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 133 (332)
|...+.||+|+||.||+|... .+..||+|.++...........+.+|+..++.++|+|++++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 466789999999999999843 24689999987654333333457899999999999999999998865443
Q ss_pred -eeEEEeccCCCCHHHHhcccC--CCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 134 -RIIVSEFINMASLDFYLHENN--DGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 134 -~~lv~e~~~~~~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
.++++||+++++|..++.... .....+++..+..++.|++.||.|||++ +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 789999999999999885432 1223478999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccc
Q 020027 211 GLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFS 281 (332)
Q Consensus 211 g~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 281 (332)
|+++..... ...+..|++||.... ..++.++|||||||++|||++ |..||.+.........+..+...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 234 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD---RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRL 234 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhccc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 998754322 123567999998765 678899999999999999999 88898776555544444332211
Q ss_pred cccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 282 ELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
.. +.....++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 235 -------~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~~ 273 (273)
T cd05035 235 -------KQ--PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273 (273)
T ss_pred -------CC--CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 11 1223347889999999999999999999999998763
No 82
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-43 Score=317.22 Aligned_cols=247 Identities=21% Similarity=0.265 Sum_probs=212.7
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCc-eeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGE-RIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~ 138 (332)
++|...+++|+|+||.++..+ ..++..+++|.+..............+|+.++++++|||||.+.+.+..++. .+|+|
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 578889999999999999998 4577899999998877666666678999999999999999999999998888 99999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
+||+||++.+.+.... ...+++.+++.++.|++.|+.|||++ +|+|||||+.||+++.++.+||+|||+|+...+
T Consensus 84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 9999999999998765 33489999999999999999999988 999999999999999999999999999987765
Q ss_pred c------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 E------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
. ..||+.|++||.+.. .+|+.|+|||||||++|||++-+++|.+.........+..+. ..|.
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d---~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~---------~~Pl 226 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSD---IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL---------YSPL 226 (426)
T ss_pred chhhhheecCCCcccCHHHhCC---CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc---------CCCC
Confidence 4 369999999999988 799999999999999999999999998876554433333322 1222
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
+.....++..++..|++.+|..||++.+++..
T Consensus 227 p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 227 PSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 23334478889999999999999999999875
No 83
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.7e-42 Score=302.16 Aligned_cols=245 Identities=21% Similarity=0.321 Sum_probs=200.2
Q ss_pred CCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
.+|...+.||+|+||.||+|...++..+|+|.+..... ....+.+|+.+++.++|+||+++++++...+..+++|||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM---SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 35788899999999999999977778899998864322 123468899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK 220 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~ 220 (332)
+++++|.+++..... .+++..++.++.|++.|++|||+. +++||||||+||++++++.+|++|||+++...+..
T Consensus 81 ~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 81 MANGCLLNYLRERKG---KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred CCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 999999999875432 378999999999999999999998 99999999999999999999999999987543321
Q ss_pred -------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 221 -------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 221 -------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
.++..|++||.... ..++.++|+||||+++||++| |+.||.+....+....+.... ..+.
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~---~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~---------~~~~ 222 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDY---SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY---------RLYR 222 (256)
T ss_pred ccccCCCCCCccccCHHHhcc---CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC---------cCCC
Confidence 12346999998876 678899999999999999999 788987665544444333221 1111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
+...+.++.+++.+||+.+|++|||+.|+++.|.
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 1223447889999999999999999999999873
No 84
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=7.8e-43 Score=310.25 Aligned_cols=258 Identities=23% Similarity=0.334 Sum_probs=207.2
Q ss_pred HHHhcCCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeee
Q 020027 56 IDAATDGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFS 128 (332)
Q Consensus 56 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 128 (332)
+....++|+..+.||+|+||.||++... ....+|+|.+..... ......+.+|+.++.++ +|+||+++++++
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3445667888999999999999999842 336899999875432 22223578899999999 799999999999
Q ss_pred ecCCceeEEEeccCCCCHHHHhcccC------------CCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCC
Q 020027 129 QAPGERIIVSEFINMASLDFYLHENN------------DGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASN 196 (332)
Q Consensus 129 ~~~~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 196 (332)
..++..+++|||+++++|..++.... .....+++..++.++.|++.|+.|||+. +++||||||+|
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~N 162 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARN 162 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccceee
Confidence 99999999999999999999986532 1123478999999999999999999998 99999999999
Q ss_pred EEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchh
Q 020027 197 ILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLL 267 (332)
Q Consensus 197 ill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~ 267 (332)
|++++++.+|++|||+++..... ..++..|++||.+.. ..++.++|||||||++||+++ |..||.+..
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 239 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD---RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 239 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc---CCcCcccceeehhhHHHHHhcCCCCCCCCCC
Confidence 99999999999999998764322 123467999998765 678899999999999999998 999998765
Q ss_pred HHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 268 VKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
.......+.... ....+......+.+++.+||+.||++|||+.++++.|+.++
T Consensus 240 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 240 VEELFKLLKEGY---------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHHHHHcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 555544443321 11122233447889999999999999999999999999876
No 85
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.8e-42 Score=300.00 Aligned_cols=242 Identities=25% Similarity=0.361 Sum_probs=194.8
Q ss_pred ceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCC
Q 020027 67 RIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMAS 145 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 145 (332)
+.||+|+||.||+|.. .+++.+|+|.+..... ......+.+|+.+++.++||||+++++++...+..+++|||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 3689999999999994 5889999998764321 2223357899999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc-----
Q 020027 146 LDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK----- 220 (332)
Q Consensus 146 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~----- 220 (332)
|.+++.... ..+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+|++|||++....+..
T Consensus 80 L~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 80 FLTFLRTEG---PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred HHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 999986532 2378999999999999999999998 99999999999999999999999999987543221
Q ss_pred ---CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHH
Q 020027 221 ---RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKP 296 (332)
Q Consensus 221 ---~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (332)
..+..|++||.... +.++.++||||||+++||+++ |..||...........+... ...+.+...
T Consensus 154 ~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~ 221 (252)
T cd05084 154 GMKQIPVKWTAPEALNY---GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG---------VRLPCPELC 221 (252)
T ss_pred CCCCCceeecCchhhcC---CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC---------CCCCCcccC
Confidence 12346999998865 668899999999999999998 88888765444433333221 111112223
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 297 LVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 297 ~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
+..+.+++.+||+.||++|||+.++.+.|+.
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 4478899999999999999999999999863
No 86
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-43 Score=287.37 Aligned_cols=247 Identities=23% Similarity=0.299 Sum_probs=212.0
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 136 (332)
+.++|+..+.||+|.||.||.|+ .+++..||+|++.+..... .....+.+|+.+-+.|+||||+++++++.++...|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 35789999999999999999999 6688899999997665433 233467899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
++||.++|.+...+...... .+++.....++.|+|.|+.|+|.. +++|||+||+|+|++..+..|++|||.+...
T Consensus 100 ilEya~~gel~k~L~~~~~~--~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMK--RFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred EEEecCCchHHHHHHhcccc--cccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 99999999999999854322 277888889999999999999998 9999999999999999999999999999877
Q ss_pred Cccc----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 217 PEEK----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 217 ~~~~----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
+... +||..|.+||...+ ..++..+|+|++|++.||++.|.+||.....++.+..+....+ ..|.
T Consensus 175 p~~kR~tlcgt~dyl~pEmv~~---~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~--------~~p~ 243 (281)
T KOG0580|consen 175 PSNKRKTLCGTLDYLPPEMVEG---RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL--------KFPS 243 (281)
T ss_pred CCCCceeeecccccCCHhhcCC---CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc--------cCCc
Confidence 6443 68999999998877 7789999999999999999999999998888888777766432 2222
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....+.+++.+|+..+|.+|.+..|++.
T Consensus 244 --~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 244 --TISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred --ccChhHHHHHHHHhccCccccccHHHHhh
Confidence 22236779999999999999999999875
No 87
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2e-42 Score=305.44 Aligned_cols=252 Identities=24% Similarity=0.324 Sum_probs=203.9
Q ss_pred cCCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCc
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGE 133 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 133 (332)
.++|...+.||+|+||.||+|... +++.||+|.++..... .....+.+|+++++.++|+|++++++++...+.
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN-DARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH-HHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 456888899999999999999852 3578999998754322 123467899999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhcccCC----------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC
Q 020027 134 RIIVSEFINMASLDFYLHENND----------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF 203 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 203 (332)
.+++|||+++++|.+++..... ....+++..+..++.|++.|+.|||++ +++||||||+||+++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCC
Confidence 9999999999999999976432 123378889999999999999999998 999999999999999999
Q ss_pred ceEEccCCccccCCc--------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHH
Q 020027 204 CARVCDYGLSFLAPE--------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPL 274 (332)
Q Consensus 204 ~~kl~dfg~a~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~ 274 (332)
.+|++|||++..... ...++..|+|||.+.. ..+++++|||||||++|||++ |..||.+.........
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY---RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIEC 236 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhcc---CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 999999999864321 1123567999999876 678999999999999999999 9999977655554444
Q ss_pred hhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 275 IKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
+..+.... .+...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 237 ~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 237 ITQGRLLQ---------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 44322111 111223478899999999999999999999999863
No 88
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.3e-43 Score=321.49 Aligned_cols=246 Identities=18% Similarity=0.242 Sum_probs=198.3
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|+..+.||+|+||.||+++ ..+|+.||+|.+....... .....+.+|+.++..++||||+++++++..++..+++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 468889999999999999999 4578999999997543222 22234678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... +++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMKKDT----FTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999876432 78999999999999999999998 999999999999999999999999998754221
Q ss_pred --------------------------------------------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHH
Q 020027 219 --------------------------------------------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLL 254 (332)
Q Consensus 219 --------------------------------------------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~ 254 (332)
...||+.|+|||.+.. ..++.++|||||||++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~ 230 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ---TGYNKECDWWSLGVIMY 230 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC---CCCCCeeeeecchhHHH
Confidence 1247899999999876 67889999999999999
Q ss_pred HHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 020027 255 EILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPS---IVQVAT 323 (332)
Q Consensus 255 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs---~~~i~~ 323 (332)
||++|..||.+.........+.... ..+..+........+.+++.+|+. +|.+|++ +.++++
T Consensus 231 el~~G~~Pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 231 EMLVGYPPFCSDNPQETYRKIINWK------ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred HhhcCCCCCCCCCHHHHHHHHHcCC------CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999999998766554443332211 111222222223467788989996 9999998 877765
No 89
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-44 Score=314.38 Aligned_cols=244 Identities=25% Similarity=0.304 Sum_probs=202.3
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
...|.....||+|.||.||+|. ..+++.||+|++..+..... ..+..+|+.+++.++++||.+++|.+..+..++++|
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~de-Iediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDE-IEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchh-hHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 3457788999999999999999 67899999999987654332 346789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
|||.||++.+.++.... +++..+.-++.++..|+.|||.+ +.+|||||+.|||+..+|.+|++|||++....+
T Consensus 91 ey~~gGsv~~lL~~~~~----~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNI----LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred HHhcCcchhhhhccCCC----CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeec
Confidence 99999999999976432 35666666889999999999999 999999999999999999999999999876544
Q ss_pred ------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 ------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
...||+.|||||+... ..|+.|+||||||++.+||++|.+|+...++..++-.+.... .|.+..
T Consensus 164 ~~~rr~tfvGTPfwMAPEVI~~---~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~-----PP~L~~-- 233 (467)
T KOG0201|consen 164 TVKRRKTFVGTPFWMAPEVIKQ---SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSA-----PPRLDG-- 233 (467)
T ss_pred hhhccccccccccccchhhhcc---ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCC-----CCcccc--
Confidence 3479999999999985 789999999999999999999999998876533322222211 122222
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....+.+++..|++.||+.|||+.++++
T Consensus 234 --~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 234 --DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred --ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 22335778999999999999999999986
No 90
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.1e-42 Score=303.46 Aligned_cols=251 Identities=24% Similarity=0.438 Sum_probs=203.2
Q ss_pred cCCCCCCceeeccCCeEEEEEEeC-CCC---EEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLS-TGK---LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~---~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
.++|+..+.||+|+||.||+|+.+ +++ .+|+|.++.... ......+..|+..++.++|+|++++.+++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT-EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 457888899999999999999953 333 799998865432 122335788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++|||+++++|.+++..... .+++.++..++.|++.|+.|||+. +++|+||||+||++++++.+|++|||++..
T Consensus 83 lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 83 IITEYMENGALDKYLRDHDG---EFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCcccee
Confidence 99999999999999875432 378999999999999999999998 999999999999999999999999999865
Q ss_pred CCccc---------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccC
Q 020027 216 APEEK---------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 216 ~~~~~---------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
..... ..+..|++||.+.. ..++.++|||||||++||++| |+.||...........+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~------ 227 (268)
T cd05063 157 LEDDPEGTYTTSGGKIPIRWTAPEAIAY---RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF------ 227 (268)
T ss_pred cccccccceeccCCCcCceecCHHHhhc---CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC------
Confidence 43221 12346999998865 567899999999999999998 999997665554444443321
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
..+........+.+++.+||+.||++||++.++++.|++++
T Consensus 228 ---~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 228 ---RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 11122223457889999999999999999999999998864
No 91
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=9.7e-43 Score=320.94 Aligned_cols=246 Identities=20% Similarity=0.194 Sum_probs=195.9
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.|...+.||+|+||+||+|+ ..+++.||+|.+....... .....+.+|+.+++.++|+||+++++.+...+..+++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 57888999999999999998 5688999999997643322 223357889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC--
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP-- 217 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~-- 217 (332)
|+++++|.+++..... +++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 82 ~~~gg~L~~~l~~~~~----~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIRMEV----FPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999876432 78888889999999999999998 99999999999999999999999999864210
Q ss_pred ---------------------------------------------------cccCCcccccCcccccccCCCCCCchhhh
Q 020027 218 ---------------------------------------------------EEKRGLAGYVDDDYWHEKGGGNATRESDV 246 (332)
Q Consensus 218 ---------------------------------------------------~~~~~~~~~~~pe~~~~~~~~~~~~~~Di 246 (332)
....||..|+|||.+.. ..++.++||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~~Di 231 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR---KGYTQLCDW 231 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC---CCCCCccce
Confidence 11258889999999875 568899999
Q ss_pred HHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHH--cccCCCCCCCCHHHHHH
Q 020027 247 YGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALA--CVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 247 wS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--c~~~dp~~RPs~~~i~~ 323 (332)
|||||++|||+||+.||.+.........+.... ..+..+.......++.+++.+ |+..+|..||++.++++
T Consensus 232 wSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 232 WSVGVILFEMLVGQPPFLAPTPTETQLKVINWE------NTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred eehhhHHHHHHhCCCCCcCCCHHHHHHHHHccc------cccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 999999999999999998765544333222211 111122211222356677776 66777778999999976
No 92
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.2e-43 Score=320.61 Aligned_cols=247 Identities=19% Similarity=0.215 Sum_probs=201.5
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||+|+. .+|+.||+|.++...... .....+.+|+.++..++|+||+++++.+..++..+++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 4688899999999999999994 589999999997643322 22335788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIRKD----VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 9999999999997652 278899999999999999999998 999999999999999999999999999865432
Q ss_pred c-----------------------------------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCC
Q 020027 219 E-----------------------------------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCE 263 (332)
Q Consensus 219 ~-----------------------------------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~ 263 (332)
. ..||..|+|||.+.. ..++.++|||||||++|||++|+.||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~ell~g~~Pf 230 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG---TPYGLECDWWSLGVILYEMLYGFPPF 230 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcC---CCCCCceeeEecchhhhhhccCCCCC
Confidence 2 247889999999876 57899999999999999999999999
Q ss_pred CchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCC-HHHHHHH
Q 020027 264 EGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPS-IVQVATI 324 (332)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs-~~~i~~~ 324 (332)
.+.........+.... .....+........+.+++.+|+. ||.+||+ ++++++.
T Consensus 231 ~~~~~~~~~~~i~~~~------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 231 YSDTLQETYNKIINWK------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCCHHHHHHHHhccC------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 8765544433332210 111111111123467899999998 9999999 9999863
No 93
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.4e-43 Score=300.06 Aligned_cols=259 Identities=20% Similarity=0.206 Sum_probs=203.5
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCC-ccceeeeeecCC-----
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN-IVPILGFSQAPG----- 132 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~----- 132 (332)
...|...+.||+|+||+||+|+ ..+|+.||+|+++.....+..-....+|+.+++.++|+| |+++++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 3456777789999999999999 678999999999877654333335689999999999999 999999998776
Q ss_pred -ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCC
Q 020027 133 -ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211 (332)
Q Consensus 133 -~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg 211 (332)
..++++||++ .+|..++.........++...+..++.|++.|++|||++ +|+||||||.|+|++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 7899999995 699999987653223467788999999999999999999 99999999999999999999999999
Q ss_pred ccccCCc------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh-------c
Q 020027 212 LSFLAPE------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE-------M 278 (332)
Q Consensus 212 ~a~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~-------~ 278 (332)
+|+...- ....|.-|.|||.+.+. ..|++..||||+|||+.||++++..|.|.........+-+ .
T Consensus 166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs--~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGS--TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEK 243 (323)
T ss_pred hHHHhcCCcccccccEEEeeccCHHHhcCC--CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCcc
Confidence 9986541 12467889999998874 5799999999999999999999999988765544433321 1
Q ss_pred ccccc---cCCcCCCC-----CC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 279 RFSEL---LDPRLAIP-----CE-----IKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 279 ~~~~~---~~~~~~~~-----~~-----~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
.|... .+.....+ .+ .+......+++.+|++++|.+|.|+...++.
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 11111 11111111 00 0111257789999999999999999998874
No 94
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.8e-42 Score=299.51 Aligned_cols=246 Identities=21% Similarity=0.249 Sum_probs=202.0
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|...+.||+|++|.||+|.. .+++.|++|.+............+.+|+.+++.++|||++++++.+...+..+++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 477788999999999999994 5789999999876544444445678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQRG--RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 999999999976422 2378899999999999999999998 9999999999999999999999999988754332
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|++||+... ..++.++|+||||+++|||+||+.||...........+..+.... . +.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------~--~~ 223 (256)
T cd08529 156 NFANTIVGTPYYLSPELCED---KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP-------V--SQ 223 (256)
T ss_pred chhhccccCccccCHHHhcC---CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-------C--cc
Confidence 246778999999876 567899999999999999999999998765444333332221111 1 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
.....+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 224 MYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 223468899999999999999999999863
No 95
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.4e-42 Score=305.79 Aligned_cols=254 Identities=23% Similarity=0.340 Sum_probs=203.2
Q ss_pred CCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 62 GFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
+|...+.||+|+||.||+|... ....+++|.+..... ......+.+|+.+++.++||||+++++.+...+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS-SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC-HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 4677889999999999999842 235788888864432 122235788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCC--------------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCC
Q 020027 136 IVSEFINMASLDFYLHENND--------------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKAS 195 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~ 195 (332)
+++||+++++|.+++..... ....+++..++.++.|++.|+.|||+. +++||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhh
Confidence 99999999999999864321 112478899999999999999999998 9999999999
Q ss_pred CEEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCch
Q 020027 196 NILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGL 266 (332)
Q Consensus 196 Nill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~ 266 (332)
||++++++.+||+|||+++..... ..++..|++||.... ..++.++||||||+++|||+| |..||.+.
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD---HIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc---CCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 999999999999999998653221 134567999998765 568899999999999999999 99999877
Q ss_pred hHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccC
Q 020027 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGD 331 (332)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~~ 331 (332)
............. ..+.+.....++.+++.+||+.||++|||+.++++.|+++...
T Consensus 234 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 234 APERLFNLLKTGY---------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred CHHHHHHHHhCCC---------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 6655554443321 1111222334788999999999999999999999999998753
No 96
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.6e-42 Score=303.88 Aligned_cols=253 Identities=19% Similarity=0.349 Sum_probs=201.6
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCC----EEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
.++|...+.||+|+||.||+|. ..+|+ .||+|.++.... ......+.+|+..++.++|+||+++++++... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~ 83 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TV 83 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-Cc
Confidence 4578889999999999999998 44555 489998865432 22233578899999999999999999998754 46
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
++++||+++|+|.+++.+... .+++..++.++.|++.||.|||++ +++||||||+||++++++.+||+|||+++
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENKD---RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred EEEEEcCCCCCHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCcee
Confidence 789999999999999876432 378999999999999999999998 99999999999999999999999999987
Q ss_pred cCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccC
Q 020027 215 LAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 215 ~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
..... ..++..|++||.... ..++.++|||||||++||++| |..||...........+..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------ 228 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILH---RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE------ 228 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhcc---CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC------
Confidence 65321 123567999998865 678899999999999999998 889987654444333332221
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccCC
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~~~ 332 (332)
..+.+......+.+++.+||+.||++|||+.++++.|+++..+|
T Consensus 229 ---~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 229 ---RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ---cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 11111223447889999999999999999999999999987765
No 97
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.8e-42 Score=306.61 Aligned_cols=253 Identities=25% Similarity=0.353 Sum_probs=200.2
Q ss_pred CCCCCCceeeccCCeEEEEEEeC-CCC--EEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCCceeE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLS-TGK--LVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 136 (332)
++|+..+.||+|+||.||+|..+ ++. .+++|.++... .......+.+|+.+++++ +||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 57888999999999999999853 443 47888776321 122223578899999999 79999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCC------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCc
Q 020027 137 VSEFINMASLDFYLHENND------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFC 204 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 204 (332)
++||+++++|.+++..... ....+++..+..++.|++.|++|||++ +++||||||+||+++.++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCe
Confidence 9999999999999965321 112478899999999999999999998 9999999999999999999
Q ss_pred eEEccCCccccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhc
Q 020027 205 ARVCDYGLSFLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEM 278 (332)
Q Consensus 205 ~kl~dfg~a~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~ 278 (332)
+||+|||++...... ...+..|++||.... ..++.++|||||||++|||+| |..||.+.........+...
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~ 234 (297)
T cd05089 158 SKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNY---SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 234 (297)
T ss_pred EEECCcCCCccccceeccCCCCcCccccCchhhcc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence 999999998643221 122446999998765 668899999999999999998 99999876655544333221
Q ss_pred ccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 279 RFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
...+.+......+.+++.+||+.||.+|||++++++.|++++
T Consensus 235 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 235 ---------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred ---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111111223346789999999999999999999999998765
No 98
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.9e-42 Score=312.25 Aligned_cols=240 Identities=21% Similarity=0.278 Sum_probs=191.7
Q ss_pred CCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-ccccHHHHHHH---hccCCCCCccceeeeeecCCceeEE
Q 020027 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-AGFGFASVIKT---LSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~---l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
|...+.||+|+||.||+|. ..+++.||+|.+++...... ....+.+|+.+ ++.++||||+++++++...+..+++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 5667899999999999998 45789999999975432222 22234556554 4567899999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||+++++|..++... .+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 81 ~E~~~~~~L~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIHTD-----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 9999999999888642 278999999999999999999998 99999999999999999999999999986432
Q ss_pred c------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 218 E------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 218 ~------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
. ...|+..|+|||.+.. ..++.++|||||||++|||++|+.||.+.........+..... ..+
T Consensus 153 ~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~--------~~p 221 (324)
T cd05589 153 GFGDRTSTFCGTPEFLAPEVLTE---TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV--------RYP 221 (324)
T ss_pred CCCCcccccccCccccCHhHhcC---CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------CCC
Confidence 1 2257889999999876 6788999999999999999999999987765555444433211 111
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
. .....+.+++.+||+.||++|| ++.++++
T Consensus 222 ~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 222 R--FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred C--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 1 1223677999999999999999 4555554
No 99
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.3e-42 Score=303.04 Aligned_cols=254 Identities=20% Similarity=0.259 Sum_probs=203.7
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||++. ..+++.+|+|.+....... .....+.+|+.+++.++|+||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 468888999999999999999 5689999999886533222 22335788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++.........+++..+..++.|++.|+.|||++ +++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999999875333333478999999999999999999998 999999999999999999999999998865432
Q ss_pred c------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHH--HHHHHhhhcccccccCCcCCC
Q 020027 219 E------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVK--WALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 290 (332)
. ..++..|++||.... ..++.++|+||||+++|||++|..||.+...+ .....+.... ...
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~ 227 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHE---NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--------YPP 227 (267)
T ss_pred CCcccccccCCcCccCHHHhcC---CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC--------CCC
Confidence 2 256788999998866 56788999999999999999999998754321 1111111110 111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
.........+.+++.+||+.||++|||+.+|++.++++
T Consensus 228 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 228 LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 11112344788999999999999999999999999876
No 100
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.5e-42 Score=304.58 Aligned_cols=251 Identities=25% Similarity=0.362 Sum_probs=201.0
Q ss_pred CCCCCCceeeccCCeEEEEEEe-----CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-----STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
++|+..+.||+|+||.||+|.. .++..+|+|.+..... ......+.+|+.+++.++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 4677889999999999999983 3567899999875332 122235788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCC-------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC
Q 020027 136 IVSEFINMASLDFYLHENND-------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 202 (332)
++|||+++++|.+++..... ....+++.+.+.++.|++.||.|||++ +++||||||+||+++++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCC
Confidence 99999999999999853221 112378889999999999999999998 99999999999999999
Q ss_pred CceEEccCCccccCCc--------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHH
Q 020027 203 FCARVCDYGLSFLAPE--------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALP 273 (332)
Q Consensus 203 ~~~kl~dfg~a~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~ 273 (332)
+.+|++|||+++.... ...++..|++||.... ..++.++|+||||+++|||++ |..||.+........
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~ 237 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY---GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIE 237 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhcc---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999865422 1234557999998865 568999999999999999999 888997765555444
Q ss_pred HhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
.+..... .+.+.....++.+++.+||+.||++||++.++.+.|..
T Consensus 238 ~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MVRKRQL---------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcCCc---------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 4433221 11112233478899999999999999999999998864
No 101
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.7e-42 Score=314.26 Aligned_cols=253 Identities=24% Similarity=0.353 Sum_probs=191.6
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC-----Ccee
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP-----GERI 135 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~ 135 (332)
+|...+.||+|+||.||+|. ..+|+.||+|.+............+.+|+.+++.++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 47778999999999999999 56889999999875433333334578999999999999999999987543 2479
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++|||+. ++|.+++..... +++..+..++.|+++||.|||++ +++||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~~~~----~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKANDD----LTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHhccc----CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999995 689888865432 78999999999999999999999 999999999999999999999999999875
Q ss_pred CCc---------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh---------
Q 020027 216 APE---------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE--------- 277 (332)
Q Consensus 216 ~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~--------- 277 (332)
... ...++..|+|||.+... ...++.++|||||||++|||+||+.||.+.........+.+
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 231 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET 231 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhcc-ccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 321 22578899999987531 14678899999999999999999999976533222111110
Q ss_pred ------ccccc---ccCCcCCCCCC---hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 278 ------MRFSE---LLDPRLAIPCE---IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 278 ------~~~~~---~~~~~~~~~~~---~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..... ........+.. ......+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 00000000000 011235779999999999999999999985
No 102
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.8e-43 Score=316.95 Aligned_cols=234 Identities=23% Similarity=0.268 Sum_probs=192.6
Q ss_pred ceeeccCCeEEEEEEe----CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccC
Q 020027 67 RIIGQGRLGTVYAALL----STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFIN 142 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 142 (332)
+.||+|+||.||+++. .+|+.+|+|.+............+..|+.++++++||||+++++++..++..+++|||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999873 478899999997654333333346789999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc---
Q 020027 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE--- 219 (332)
Q Consensus 143 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~--- 219 (332)
+++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++......
T Consensus 82 ~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 82 GGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 999999986543 278999999999999999999998 9999999999999999999999999998754322
Q ss_pred ---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHH
Q 020027 220 ---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKP 296 (332)
Q Consensus 220 ---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (332)
..|+..|++||.+.. ..++.++|||||||++|||+||+.||.+.........+.... ...+.. .
T Consensus 155 ~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~--------~~~p~~--~ 221 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNR---RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK--------LGMPQF--L 221 (318)
T ss_pred eecccCChhhcCHHHHcC---CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC--------CCCCCC--C
Confidence 247889999999876 567889999999999999999999998766555544443321 111111 2
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHH
Q 020027 297 LVRLAKVALACVGNSRKNRPSIVQ 320 (332)
Q Consensus 297 ~~~l~~l~~~c~~~dp~~RPs~~~ 320 (332)
...+.+++.+||+.||++|||+.+
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCC
Confidence 236779999999999999999655
No 103
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.3e-42 Score=299.39 Aligned_cols=241 Identities=18% Similarity=0.307 Sum_probs=193.5
Q ss_pred eeeccCCeEEEEEEeC---CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCC
Q 020027 68 IIGQGRLGTVYAALLS---TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMA 144 (332)
Q Consensus 68 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 144 (332)
.||+|+||.||+|.+. ++..||+|.+..... ......+.+|+.++++++|+||+++++++.. +..+++|||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE-KSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC-hHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCC
Confidence 4899999999999742 455799999875432 2222357899999999999999999998864 4678999999999
Q ss_pred CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc----
Q 020027 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK---- 220 (332)
Q Consensus 145 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~---- 220 (332)
+|.+++..... .+++..++.++.|++.||.|||++ +++||||||+||+++.++.+|++|||++.......
T Consensus 80 ~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 80 PLNKFLSGKKD---EITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 99999865322 378999999999999999999998 99999999999999999999999999986443211
Q ss_pred -----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 221 -----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 221 -----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
.++..|++||.+.. ..++.++|||||||++||+++ |..||.+.........+..+. ..+.+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---------~~~~~~ 221 (257)
T cd05115 154 ARSAGKWPLKWYAPECINF---RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK---------RLDCPA 221 (257)
T ss_pred ccCCCCCCcccCCHHHHcc---CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC---------CCCCCC
Confidence 12467999998865 567889999999999999997 999998766555444443321 111222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
.+..++.+++.+||+.||++||++.+|.+.|+..
T Consensus 222 ~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 222 ECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 3345788999999999999999999999999864
No 104
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.6e-42 Score=312.60 Aligned_cols=237 Identities=19% Similarity=0.248 Sum_probs=192.4
Q ss_pred ceeeccCCeEEEEEEe----CCCCEEEEEEeccCcccc--cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 67 RIIGQGRLGTVYAALL----STGKLVAVKRIHPRLVLS--NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+.||+|+||.||+++. .+++.||+|.++...... .....+.+|+.+++.++||||+++++.+..++..+++|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999984 367899999987543211 1222467899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc--
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-- 218 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~-- 218 (332)
+++++|.+++..... +++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~~L~~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLEREGI----FMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999999875432 67888888999999999999998 999999999999999999999999999864321
Q ss_pred ----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 219 ----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 219 ----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
...|+..|+|||.+.. ..++.++|||||||++|||++|+.||.+.........+..+. ...+.
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~--------~~~~~-- 221 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMR---SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK--------LNLPP-- 221 (323)
T ss_pred CcccccCCCccccChhhccC---CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------CCCCC--
Confidence 1257889999999876 567889999999999999999999998765554444433321 11111
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
.....+.+++.+||+.||++|| ++.++++
T Consensus 222 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 222 YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 1223678999999999999999 7777765
No 105
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6.7e-43 Score=315.37 Aligned_cols=237 Identities=19% Similarity=0.274 Sum_probs=193.5
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMA 144 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 144 (332)
+.||+|+||.||++. ..+|+.||+|.+....... .....+..|+.++..++||||+++.+++..++..+++|||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999998 5689999999997643322 22234678899999999999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhc-CCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-----
Q 020027 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ-GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----- 218 (332)
Q Consensus 145 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~----- 218 (332)
+|..++.... .+++..+..++.|++.||.|||+ . +++||||||+|||++.++.+||+|||+++....
T Consensus 81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (325)
T cd05594 81 ELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 153 (325)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc
Confidence 9998886543 27899999999999999999997 6 999999999999999999999999999864321
Q ss_pred -ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 219 -EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 219 -~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
...|+..|+|||.+.. ..++.++|||||||++|||+||+.||.+.........+.... ...+.. ..
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~--------~~~p~~--~~ 220 (325)
T cd05594 154 KTFCGTPEYLAPEVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--------IRFPRT--LS 220 (325)
T ss_pred ccccCCcccCCHHHHcc---CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC--------CCCCCC--CC
Confidence 1258899999999875 678899999999999999999999998766554444333221 111111 12
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 298 VRLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
.++.+++.+||+.||++|+ ++.++++
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 221 PEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 3677999999999999996 8888874
No 106
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=5.5e-42 Score=300.37 Aligned_cols=255 Identities=21% Similarity=0.303 Sum_probs=204.9
Q ss_pred CCCCCCceeeccCCeEEEEEEeC-CCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|+..+.||+|+||.||+|... +|+.||+|.++...... .....+.+|+.++++++|+|++++++.+...+..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999954 89999999987533222 22345789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|..++.........+++.+++.++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999999875433334478999999999999999999998 999999999999999999999999999865432
Q ss_pred c------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHH--HHHHHhhhcccccccCCcCCC
Q 020027 219 E------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVK--WALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 290 (332)
. ..++..|.+||.... ..++.++|+||||+++|||++|+.||...... .....+..+... ..
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------~~ 228 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHE---NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYP-------PL 228 (267)
T ss_pred CCcccceecCCccccCHHHhcc---CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCC-------CC
Confidence 2 246778999998865 66889999999999999999999998653211 111111111110 01
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
+ .......+.+++.+||..+|++|||+.++++.|+++-
T Consensus 229 ~-~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 229 P-ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred C-hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1 1123346789999999999999999999999998763
No 107
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.6e-42 Score=312.13 Aligned_cols=232 Identities=24% Similarity=0.301 Sum_probs=189.6
Q ss_pred ceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccC-CCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|+. .+++.||+|.+.+..... .....+..|..++..+ +||||+++++++...+..+++|||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999994 578999999987543222 2223456777877766 799999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC------
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP------ 217 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~------ 217 (332)
++|.+++..... +++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++....
T Consensus 81 g~L~~~i~~~~~----l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~ 153 (320)
T cd05590 81 GDLMFHIQKSRR----FDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153 (320)
T ss_pred chHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcc
Confidence 999998876432 78899999999999999999998 99999999999999999999999999986432
Q ss_pred cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 218 EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 218 ~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
....|+..|+|||.+.. ..++.++|||||||++|||++|+.||.+.........+..... ..+. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~--------~~~~--~~~ 220 (320)
T cd05590 154 STFCGTPDYIAPEILQE---MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV--------VYPT--WLS 220 (320)
T ss_pred cccccCccccCHHHHcC---CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC--------CCCC--CCC
Confidence 12357899999999875 6788999999999999999999999988766655554433221 1111 122
Q ss_pred HHHHHHHHHcccCCCCCCCCH
Q 020027 298 VRLAKVALACVGNSRKNRPSI 318 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~ 318 (332)
.++.+++.+||+.||++||++
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 221 QDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHHHcccCHHHCCCC
Confidence 367799999999999999998
No 108
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1e-42 Score=320.50 Aligned_cols=247 Identities=19% Similarity=0.231 Sum_probs=196.5
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||++. ..+++.||+|.+....... .....+.+|+.+++.++||||+++++++.+++..+++|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 468889999999999999998 5689999999986543221 22234678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... +++..+..++.|++.||.|||+. +|+||||||+|||++.++.+|++|||+++....
T Consensus 81 E~~~gg~L~~~l~~~~~----~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIKYDT----FSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999875432 78888999999999999999998 999999999999999999999999999852110
Q ss_pred -----------------------------------------------------ccCCcccccCcccccccCCCCCCchhh
Q 020027 219 -----------------------------------------------------EKRGLAGYVDDDYWHEKGGGNATRESD 245 (332)
Q Consensus 219 -----------------------------------------------------~~~~~~~~~~pe~~~~~~~~~~~~~~D 245 (332)
...||..|+|||.+.. ..++.++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~D 230 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ---QGYGQECD 230 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc---CCCCCcee
Confidence 1247889999999876 67889999
Q ss_pred hHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCC---CCHHHHH
Q 020027 246 VYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNR---PSIVQVA 322 (332)
Q Consensus 246 iwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~R---Ps~~~i~ 322 (332)
||||||++|||+||..||.+....+....+.... ..+..+.......++.+++.+|+. +|.+| ||+.|++
T Consensus 231 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l 303 (377)
T cd05629 231 WWSLGAIMFECLIGWPPFCSENSHETYRKIINWR------ETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIK 303 (377)
T ss_pred eEecchhhhhhhcCCCCCCCCCHHHHHHHHHccC------CccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHh
Confidence 9999999999999999998765554444333211 111122221223467789999997 67665 5998887
Q ss_pred HH
Q 020027 323 TI 324 (332)
Q Consensus 323 ~~ 324 (332)
+.
T Consensus 304 ~h 305 (377)
T cd05629 304 SH 305 (377)
T ss_pred cC
Confidence 63
No 109
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.5e-42 Score=299.58 Aligned_cols=248 Identities=22% Similarity=0.380 Sum_probs=202.3
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
..++|...+.||+|+||.||+|...+++.||+|.+..... ....+.+|+.+++.++|+|++++++++. .+..+++|
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM---SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC---cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 4567888999999999999999988889999999874432 2235789999999999999999999874 45689999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... ..+++.+...++.|++.||+|||+. +++|+||||+||++++++.++++|||++.....
T Consensus 80 e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 80 EYMENGSLVDFLKTPEG--IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EcCCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 99999999999865432 2378899999999999999999998 999999999999999999999999999865441
Q ss_pred c-------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 219 E-------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ~-------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
. ..++..|++||.... ..++.++||||||+++||+++ |+.||.+.........+.... ..
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---------~~ 222 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINY---GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY---------RM 222 (260)
T ss_pred CCcccccCCcccccccCHHHhcc---CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC---------CC
Confidence 1 123567999998865 567899999999999999999 999998765544444333221 11
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
+.+...+.++.+++.+||+.||++|||++++.+.|+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1122233478899999999999999999999999975
No 110
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.6e-42 Score=316.36 Aligned_cols=247 Identities=23% Similarity=0.291 Sum_probs=191.4
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|+..+.||+|+||.||+|+ ..+++.||+|.+..... ......+.+|+.+++.++|+||+++++++...+..+++|
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc-HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 3567778899999999999999 45789999999864432 122235789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.... ..++..+..++.|++.||.|||++ +++||||||+|||+++++.+||+|||+++....
T Consensus 152 e~~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 152 EFMDGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred ecCCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence 999999886432 145677888999999999999998 999999999999999999999999999875432
Q ss_pred ------ccCCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 219 ------EKRGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
...|+..|++||.+... .+...+.++|||||||++|||++|+.||...........+....... . .
T Consensus 221 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~----~--~ 294 (353)
T PLN00034 221 TMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ----P--P 294 (353)
T ss_pred ccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC----C--C
Confidence 23578899999987542 12344578999999999999999999997432211111111110000 0 1
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
........++.+++.+||+.||++|||+.|+++.
T Consensus 295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112233478899999999999999999999863
No 111
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.4e-42 Score=304.49 Aligned_cols=253 Identities=21% Similarity=0.345 Sum_probs=203.5
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG 132 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 132 (332)
..++|...+.||+|+||.||+|... ++..||+|.+..... ......+.+|+.+++.++|+||+++++++...+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 4567888999999999999999842 346899999864432 122235788999999999999999999999999
Q ss_pred ceeEEEeccCCCCHHHHhcccCCC------CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceE
Q 020027 133 ERIIVSEFINMASLDFYLHENNDG------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCAR 206 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 206 (332)
..+++|||+++++|.+++...... ...+++..++.++.|++.|+.|||+. +++||||||+||+++.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEE
Confidence 999999999999999998753321 12368889999999999999999998 999999999999999999999
Q ss_pred EccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhh
Q 020027 207 VCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKE 277 (332)
Q Consensus 207 l~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~ 277 (332)
|+|||+++..... ..++..|++||.... ..++.++|||||||++||++| |..||.+.........+..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 236 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD---GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID 236 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhc---CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc
Confidence 9999998653221 234678999998865 568899999999999999998 8999987665555544443
Q ss_pred cccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 278 MRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
+.. ...+ ......+.+++.+||+.+|++|||+.++++.|++
T Consensus 237 ~~~-------~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 237 GGH-------LDLP--ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCC-------CCCC--CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 211 1111 1224578899999999999999999999999864
No 112
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.1e-41 Score=295.80 Aligned_cols=241 Identities=26% Similarity=0.380 Sum_probs=196.7
Q ss_pred ceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCH
Q 020027 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASL 146 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 146 (332)
+.||+|+||.||+|...++..+|+|.++.... ......+.+|+..++.++|||++++++++...+..+++|||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 36899999999999987889999999875432 22223578899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc------
Q 020027 147 DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK------ 220 (332)
Q Consensus 147 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~------ 220 (332)
.+++..... .+++..+..++.|++.||.|+|++ +++|+||+|+||+++.++.+|++|||++.......
T Consensus 80 ~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 80 LSFLRKKKD---ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred HHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence 999865432 278999999999999999999998 99999999999999999999999999986543221
Q ss_pred -CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHH
Q 020027 221 -RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLV 298 (332)
Q Consensus 221 -~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (332)
.++..|++||+... ..++.++||||||+++||+++ |..||.+.........+.... . ...+...+.
T Consensus 154 ~~~~~~y~aPE~~~~---~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~ 221 (250)
T cd05085 154 KQIPIKWTAPEALNY---GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY-------R--MSCPQKCPD 221 (250)
T ss_pred CCCcccccCHHHhcc---CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-------C--CCCCCCCCH
Confidence 23457999998865 678899999999999999998 999998765544433333221 1 111122334
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 299 RLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 299 ~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
.+.+++.+||+.+|++|||+.++++.|.
T Consensus 222 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 222 DVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 7889999999999999999999999875
No 113
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.2e-43 Score=316.28 Aligned_cols=250 Identities=19% Similarity=0.227 Sum_probs=200.7
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||+++ ..+|+.||+|.++...... .....+.+|+.+++.++|+||+++++++...+..+++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 468889999999999999999 4588999999998654322 22234678899999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRYED---QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 99999999999976522 278999999999999999999998 999999999999999999999999999865432
Q ss_pred c-------cCCcccccCcccccccC---CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcC
Q 020027 219 E-------KRGLAGYVDDDYWHEKG---GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 219 ~-------~~~~~~~~~pe~~~~~~---~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (332)
. ..++..|+|||.+.... ...++.++|||||||++|||++|+.||.+.........+.... ...
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~------~~~ 228 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQ------RFL 228 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCC------Ccc
Confidence 2 25788999999886321 2567899999999999999999999998765544433332211 011
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..+........+.+++..||+ ||++|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 229 KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 122222233467789999998 9999999999874
No 114
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.4e-42 Score=303.21 Aligned_cols=244 Identities=18% Similarity=0.226 Sum_probs=189.8
Q ss_pred eeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCH
Q 020027 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASL 146 (332)
Q Consensus 69 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 146 (332)
||+|+||.||++. ..+|+.+|+|.+........ .......|+.++++++||||+++++.+..+...+++|||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 6999999999998 45799999999875433221 122346789999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-----cC
Q 020027 147 DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE-----KR 221 (332)
Q Consensus 147 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~-----~~ 221 (332)
.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||++....+. ..
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGE--RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRA 155 (277)
T ss_pred HHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccC
Confidence 988865432 2278899999999999999999998 9999999999999999999999999998654332 35
Q ss_pred CcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHH
Q 020027 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLA 301 (332)
Q Consensus 222 ~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (332)
++..|++||.+.. ..++.++||||+||++|||++|+.||.+.........+...... ....... .....++.
T Consensus 156 ~~~~y~aPE~~~~---~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~ 227 (277)
T cd05607 156 GTNGYMAPEILKE---EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE----DEVKFEH-QNFTEESK 227 (277)
T ss_pred CCCCccCHHHHcc---CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc----ccccccc-ccCCHHHH
Confidence 7889999999876 56899999999999999999999999754322111111111111 1111110 11233678
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHH
Q 020027 302 KVALACVGNSRKNRPSIVQVATIL 325 (332)
Q Consensus 302 ~l~~~c~~~dp~~RPs~~~i~~~L 325 (332)
+++.+||+.||++||++.|+++.+
T Consensus 228 ~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 228 DICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHHHhccCHhhCCCCccchhhh
Confidence 999999999999999997766443
No 115
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.5e-43 Score=319.55 Aligned_cols=252 Identities=18% Similarity=0.225 Sum_probs=202.4
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
...++|...+.||+|+||.||+++ ..+++.||+|.+....... .....+.+|+.+++.++||||+++++++..++..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 345689999999999999999999 4578999999986533222 22223678999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++|||+++|+|.+++.... ++...+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++..
T Consensus 120 lv~Ey~~gg~L~~~l~~~~-----l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~ 191 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNYD-----IPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (370)
T ss_pred EEEcCCCCCcHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceee
Confidence 9999999999999986532 67788888999999999999998 999999999999999999999999999865
Q ss_pred CCc-------ccCCcccccCcccccccC-CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCc
Q 020027 216 APE-------EKRGLAGYVDDDYWHEKG-GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287 (332)
Q Consensus 216 ~~~-------~~~~~~~~~~pe~~~~~~-~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (332)
... ...|++.|+|||.+.... ...++.++|||||||++|||++|+.||.+.........+.... ..
T Consensus 192 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~------~~ 265 (370)
T cd05596 192 MDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHK------NS 265 (370)
T ss_pred ccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC------Cc
Confidence 432 235889999999886532 2457899999999999999999999998765544444333221 11
Q ss_pred CCCCCChHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 020027 288 LAIPCEIKPLVRLAKVALACVGNSRKN--RPSIVQVAT 323 (332)
Q Consensus 288 ~~~~~~~~~~~~l~~l~~~c~~~dp~~--RPs~~~i~~ 323 (332)
+..+........+.+++.+|++.+|++ |||+.++++
T Consensus 266 ~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 266 LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 122222223347789999999999987 999999865
No 116
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.5e-42 Score=309.47 Aligned_cols=236 Identities=21% Similarity=0.272 Sum_probs=188.3
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhcc-CCCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSL-AQHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|. ..+++.||+|.++...... ........|..++.. .+||||+++++++...+..+++|||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999 4578899999997643222 122234556666654 4899999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-----
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----- 218 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~----- 218 (332)
++|..++..... +++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 g~L~~~~~~~~~----~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~ 153 (316)
T cd05592 81 GDLMFHIQSSGR----FDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA 153 (316)
T ss_pred CcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcc
Confidence 999999876432 78889999999999999999998 999999999999999999999999999864321
Q ss_pred -ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 219 -EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 219 -~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
...||..|+|||.+.. ..++.++|||||||++|||++|+.||.+.........+.... ...+ ....
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--------~~~~--~~~~ 220 (316)
T cd05592 154 STFCGTPDYIAPEILKG---QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR--------PHFP--RWIS 220 (316)
T ss_pred ccccCCccccCHHHHcC---CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--------CCCC--CCCC
Confidence 2357899999999875 568899999999999999999999998876555544433211 1111 1122
Q ss_pred HHHHHHHHHcccCCCCCCCCHH-HHH
Q 020027 298 VRLAKVALACVGNSRKNRPSIV-QVA 322 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~-~i~ 322 (332)
.++.+++.+||+.||++||++. +++
T Consensus 221 ~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 221 KEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHHH
Confidence 3677899999999999999875 443
No 117
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.7e-42 Score=304.46 Aligned_cols=254 Identities=26% Similarity=0.399 Sum_probs=196.5
Q ss_pred CCCceeeccCCeEEEEEE-----eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC--CceeE
Q 020027 64 SHRRIIGQGRLGTVYAAL-----LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GERII 136 (332)
Q Consensus 64 ~~~~~lg~G~~g~V~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 136 (332)
...+.||+|+||.||.+. ..++..||+|.++.... ......+.+|+.+++.++||||+++++++... ...++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 778999999999998765 24678999999875432 12233578899999999999999999987653 45789
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
+|||+++++|.+++.... +++..+..++.|++.|+.|||++ +++|+||||+||++++++.++++|||+++..
T Consensus 86 v~e~~~~~~l~~~~~~~~-----l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 86 IMEYVPLGSLRDYLPKHK-----LNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EecCCCCCCHHHHHHHcC-----CCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccccc
Confidence 999999999999996532 79999999999999999999998 9999999999999999999999999998765
Q ss_pred Ccc---------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHH--HHHH----hhhcccc
Q 020027 217 PEE---------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKW--ALPL----IKEMRFS 281 (332)
Q Consensus 217 ~~~---------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~--~~~~----~~~~~~~ 281 (332)
... ..++..|++||.... ..++.++||||||+++|||+||..|+....... .... .....+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKE---NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLI 234 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcc---cCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhh
Confidence 432 124556899998865 578899999999999999999999986432211 0000 0000111
Q ss_pred cccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 282 ELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
+..+.....+.+...+.++.+++.+||+.||++|||++++++.|+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 235 ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111122222223334458889999999999999999999999998764
No 118
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-43 Score=301.54 Aligned_cols=254 Identities=23% Similarity=0.283 Sum_probs=199.7
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC-----Cc
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP-----GE 133 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 133 (332)
...|...+.||+|+||.|..+. ..+|+.||+|++..............+|++.++.++|+||+.+.+.+..+ +.
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 4456667899999999999998 67899999999986655555555679999999999999999999988652 46
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
.|+|+|+| +.+|...+++... ++..++..+++|++.||.|+|+. +++||||||+|++++.+...||+|||+|
T Consensus 101 vYiV~elM-etDL~~iik~~~~----L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQQD----LTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eEEehhHH-hhHHHHHHHcCcc----ccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccce
Confidence 79999999 5799999987543 78899999999999999999998 9999999999999999999999999999
Q ss_pred ccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh--------
Q 020027 214 FLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE-------- 277 (332)
Q Consensus 214 ~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~-------- 277 (332)
+...+. ...|.-|.|||..... ..|+.+.||||.|||+.||++|++-|.|...-.....+.+
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~--~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNS--SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhcc--ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 987531 1357778999988653 7899999999999999999999998876533333222211
Q ss_pred -------cccccccC---CcCCCCCC---hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 278 -------MRFSELLD---PRLAIPCE---IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 278 -------~~~~~~~~---~~~~~~~~---~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
......+. ...+.+.. +.......+++.+++.+||.+|+|++|.++
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111111 01111100 122236779999999999999999999875
No 119
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.3e-42 Score=315.73 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=194.3
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC-----cee
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-----ERI 135 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 135 (332)
+|+..+.||+|+||.||++. ..+|+.||+|.+............+.+|+.+++.++|+||+++++++..++ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 47888999999999999999 468999999998654332223335788999999999999999999998776 789
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
+++||+. ++|.+++.... .+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ----PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999996 57877775433 278999999999999999999998 999999999999999999999999999875
Q ss_pred CCcc-------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc----c-----
Q 020027 216 APEE-------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM----R----- 279 (332)
Q Consensus 216 ~~~~-------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~----~----- 279 (332)
.... ..++..|+|||.+... ..++.++|||||||++|||++|+.||.+.........+.+. .
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGS--RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR 230 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCC--CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 4321 2457789999988652 45789999999999999999999999876544333322110 0
Q ss_pred -----ccc-ccCCcCCC-------CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 -----FSE-LLDPRLAI-------PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 -----~~~-~~~~~~~~-------~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
... ........ ........++.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 000 00000000 001112346789999999999999999999986
No 120
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8e-42 Score=299.79 Aligned_cols=251 Identities=25% Similarity=0.411 Sum_probs=202.1
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CC---CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-ST---GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~---~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
.++|...+.||+|+||.||+|.. .+ +..+|+|.++.... ......+.+|+..++.++||||+++++++..++..+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 34678889999999999999984 23 33799998865432 222335788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++|||+++++|.+++..... .+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||++..
T Consensus 82 lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDG---QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence 99999999999999976432 378899999999999999999998 999999999999999999999999999876
Q ss_pred CCccc---------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccC
Q 020027 216 APEEK---------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 216 ~~~~~---------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
..... .++..|++||.+.. ..++.++|+||||+++||+++ |..||.+.........+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~---~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~------ 226 (267)
T cd05066 156 LEDDPEAAYTTRGGKIPIRWTAPEAIAY---RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY------ 226 (267)
T ss_pred cccccceeeecCCCccceeecCHhHhcc---CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC------
Confidence 43321 12356999999875 578899999999999999887 999997765444444333321
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
..+.+...+..+.+++.+||+.+|++|||+.++++.|.+++
T Consensus 227 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 267 (267)
T cd05066 227 ---RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI 267 (267)
T ss_pred ---cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhhC
Confidence 11112223346789999999999999999999999998753
No 121
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.3e-42 Score=309.89 Aligned_cols=237 Identities=22% Similarity=0.288 Sum_probs=192.1
Q ss_pred ceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccC-CCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|.. .+++.||+|.++...... .....+..|..++..+ +||||+++++++...+..+++|||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999984 578899999997643222 2223456788888777 799999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-----
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----- 218 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~----- 218 (332)
++|..++..... +++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++....
T Consensus 81 ~~L~~~~~~~~~----l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (318)
T cd05570 81 GDLMFHIQRSGR----FDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT 153 (318)
T ss_pred CCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc
Confidence 999998876432 78999999999999999999998 999999999999999999999999999864211
Q ss_pred -ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 219 -EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 219 -~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
...++..|+|||.+.. ..++.++|||||||++|||+||+.||.+.........+.... ...+. ...
T Consensus 154 ~~~~g~~~y~aPE~~~~---~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~--------~~~~~--~~~ 220 (318)
T cd05570 154 STFCGTPDYIAPEILSY---QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE--------VRYPR--WLS 220 (318)
T ss_pred cceecCccccCHHHhcC---CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--------CCCCC--cCC
Confidence 1247889999999876 678899999999999999999999998766555444333221 11111 123
Q ss_pred HHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 020027 298 VRLAKVALACVGNSRKNRPSI-----VQVAT 323 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~-----~~i~~ 323 (332)
..+.+++.+||+.||++|||+ .++++
T Consensus 221 ~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 221 KEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 467899999999999999999 77654
No 122
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.1e-41 Score=297.61 Aligned_cols=247 Identities=22% Similarity=0.402 Sum_probs=200.7
Q ss_pred cCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.++|+..+.||+|+||.||+|...++..+|+|.++.... ....+.+|+.++++++|+|++++++++. .+..+++||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM---SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC---CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 456888999999999999999987888899999876432 2235789999999999999999999875 456789999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+++++|.+++..... ..+++.+++.++.|++.|+.|||++ +++||||||+||++++++.++++|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 81 YMSKGSLLDFLKDGEG--RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred ecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 9999999999975432 2378999999999999999999998 9999999999999999999999999998654322
Q ss_pred c-------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 220 K-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 220 ~-------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
. .++..|+|||.... ..++.++|+||||+++||+++ |..||.+....+....+... ...+
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~---------~~~~ 223 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG---------YRMP 223 (260)
T ss_pred ccccccCCCCCccccChHHHhc---CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---------CCCC
Confidence 1 23457999998765 678899999999999999999 88899776554444433221 1111
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
.+......+.+++.+||+.||++|||+.++.+.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 222333478899999999999999999999999875
No 123
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.8e-42 Score=304.83 Aligned_cols=248 Identities=21% Similarity=0.259 Sum_probs=196.7
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccc-cccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
+|+..+.||+|+||.||++. ..+++.||+|.+......... ...+.+|+.+++.++||||+++++.+..++..+++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 47788999999999999999 457899999998754332222 2346789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGN--PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 9999999988865322 2378999999999999999999998 9999999999999999999999999998764322
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|++||.... ..++.++||||+||++||+++|+.||.+.........+... .. ... ...+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~-~~---~~~--~~~~~ 226 (285)
T cd05605 156 ETIRGRVGTVGYMAPEVVKN---ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERR-VK---EDQ--EEYSE 226 (285)
T ss_pred CccccccCCCCccCcHHhcC---CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHH-hh---hcc--cccCc
Confidence 257889999999865 67889999999999999999999999875443222222111 00 000 11111
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
.....+.+++.+||+.||++|| +++++++
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 227 KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 2234678999999999999999 7878754
No 124
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.2e-42 Score=311.44 Aligned_cols=237 Identities=20% Similarity=0.257 Sum_probs=191.5
Q ss_pred ceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccC-CCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|+. .+++.||+|.++...... .....+..|..++..+ +||||+++++++..++..+++|||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999994 578899999987643222 2222456788888765 799999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-----
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----- 218 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~----- 218 (332)
++|..++..... +++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (321)
T cd05591 81 GDLMFQIQRSRK----FDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 153 (321)
T ss_pred CcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCccc
Confidence 999988875432 78889999999999999999999 999999999999999999999999999864321
Q ss_pred -ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 219 -EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 219 -~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
...|+..|+|||.+.. ..++.++|||||||++|||+||+.||.+.........+..... ..+. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~--------~~p~--~~~ 220 (321)
T cd05591 154 TTFCGTPDYIAPEILQE---LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV--------LYPV--WLS 220 (321)
T ss_pred cccccCccccCHHHHcC---CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--------CCCC--CCC
Confidence 2247889999998875 6788999999999999999999999988766555544433221 1111 122
Q ss_pred HHHHHHHHHcccCCCCCCC-------CHHHHHH
Q 020027 298 VRLAKVALACVGNSRKNRP-------SIVQVAT 323 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RP-------s~~~i~~ 323 (332)
.++.+++.+||+.||++|| ++.++++
T Consensus 221 ~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 221 KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 3677999999999999999 6666653
No 125
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.5e-42 Score=307.02 Aligned_cols=255 Identities=26% Similarity=0.365 Sum_probs=200.3
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCC--EEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCCcee
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGK--LVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 135 (332)
.++|+..+.||+|+||.||+|.. .++. .+++|.++... .......+.+|+.++.++ +|+||+++++++...+..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 45788889999999999999995 4554 45777665321 122223567899999999 8999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCC------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC
Q 020027 136 IVSEFINMASLDFYLHENND------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF 203 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 203 (332)
+++||+++++|.+++..... ....+++.+++.++.|++.|++|||++ +++||||||+|||++.++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCC
Confidence 99999999999999975431 112478999999999999999999998 999999999999999999
Q ss_pred ceEEccCCccccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhh
Q 020027 204 CARVCDYGLSFLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKE 277 (332)
Q Consensus 204 ~~kl~dfg~a~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~ 277 (332)
.+||+|||++...... ...+..|++||.... ..++.++|||||||++|||+| |..||.+.........+..
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 238 (303)
T cd05088 162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY---SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 238 (303)
T ss_pred cEEeCccccCcccchhhhcccCCCcccccCHHHHhc---cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc
Confidence 9999999998643211 123457999998765 567899999999999999998 9999976655444333322
Q ss_pred cccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 278 MRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
.. . .+.+......+.+++.+||+.+|++|||+.++++.|++++.
T Consensus 239 ~~-------~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 239 GY-------R--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred CC-------c--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 10 1 11111223367899999999999999999999999988764
No 126
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.3e-42 Score=322.31 Aligned_cols=252 Identities=18% Similarity=0.205 Sum_probs=189.3
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC-------
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP------- 131 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------- 131 (332)
..+|...+.||+|+||.||+|.. .+++.||+|.+.... ....+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 45799999999999999999994 678999999885321 1236799999999999999998876332
Q ss_pred -CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC-ceEEcc
Q 020027 132 -GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF-CARVCD 209 (332)
Q Consensus 132 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~d 209 (332)
...+++|||++ +++.+++.........+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|
T Consensus 139 ~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 139 NIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred ceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 24678999997 477777654332333488999999999999999999998 999999999999998654 799999
Q ss_pred CCccccCCc-----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc--c---
Q 020027 210 YGLSFLAPE-----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM--R--- 279 (332)
Q Consensus 210 fg~a~~~~~-----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~--- 279 (332)
||+|+.... ...++..|+|||.+... ..++.++|||||||++|||+||.+||.+.........+... .
T Consensus 215 FGla~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 215 FGSAKNLLAGQRSVSYICSRFYRAPELMLGA--TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred cccchhccCCCCcccCCCCcCccCHHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 999975432 22568889999987642 46899999999999999999999999876443332222110 0
Q ss_pred ---------cccccCCc-----CCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 ---------FSELLDPR-----LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 ---------~~~~~~~~-----~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.+..-+. +....+.....++.+++.+||+.||.+|||+.|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00000000 000011112347889999999999999999999874
No 127
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.4e-42 Score=300.73 Aligned_cols=252 Identities=23% Similarity=0.258 Sum_probs=198.3
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|+..+.||+|+||.||+|+ ..+++.||+|.+..... .....+.+|+.+++.++||||+++++.+...+..+++|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 4578999999999999999999 46888999999865432 12224678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++.... .+++..+..++.|++.|+.|||+. +++|||++|+||++++++.++++|||++.....
T Consensus 86 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 86 EYCGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 9999999999886543 278899999999999999999998 999999999999999999999999999865432
Q ss_pred ------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 ------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
...++..|++||.........++.++|+|||||++|||++|+.||...........+....+ ..+....
T Consensus 159 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~-- 233 (267)
T cd06646 159 TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNF---QPPKLKD-- 233 (267)
T ss_pred cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCC---CCCCCcc--
Confidence 12467789999987543345678899999999999999999999865432222111111110 0111111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATIL 325 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L 325 (332)
.......+.+++.+||+.||++|||++++++.|
T Consensus 234 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 234 KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 112234788999999999999999999998743
No 128
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.6e-42 Score=306.48 Aligned_cols=258 Identities=22% Similarity=0.332 Sum_probs=206.6
Q ss_pred HHhcCCCCCCceeeccCCeEEEEEEe--------CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeee
Q 020027 57 DAATDGFSHRRIIGQGRLGTVYAALL--------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGF 127 (332)
Q Consensus 57 ~~~~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 127 (332)
....++|...+.||+|+||.||+++. .++..||+|.+..... ......+.+|+..++.+ +||||++++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 34567788899999999999999973 1345799998864322 22234578899999999 89999999999
Q ss_pred eecCCceeEEEeccCCCCHHHHhcccCCC------------CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCC
Q 020027 128 SQAPGERIIVSEFINMASLDFYLHENNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKAS 195 (332)
Q Consensus 128 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~ 195 (332)
+...+..+++|||+++++|.+++...... ...+++.+++.++.|++.||.|||++ +++||||||+
T Consensus 90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 166 (304)
T cd05101 90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAAR 166 (304)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccc
Confidence 99999999999999999999999764221 12378888999999999999999998 9999999999
Q ss_pred CEEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCch
Q 020027 196 NILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGL 266 (332)
Q Consensus 196 Nill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~ 266 (332)
||++++++.+|++|||+++..... ..++..|+|||.+.. ..++.++||||||+++||++| |..||.+.
T Consensus 167 Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 167 NVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD---RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred eEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc---CCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999998754321 123567999998865 568899999999999999999 78888876
Q ss_pred hHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
...+....+..... ...+..+...+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 244 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 244 PVEELFKLLKEGHR---------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred CHHHHHHHHHcCCc---------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 66555554433211 11112334478899999999999999999999999998763
No 129
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.3e-41 Score=297.62 Aligned_cols=248 Identities=22% Similarity=0.375 Sum_probs=200.2
Q ss_pred cCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.++|...+.||+|+||.||+|...++..||+|.++.... ....+.+|+.+++.++|+||+++++.+.. +..+++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e 80 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 80 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc---CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEE
Confidence 456888999999999999999976667899999875332 12357889999999999999999998754 55789999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+++++|.+++.+... ..+++..++.++.|++.||+|||+. +++|+||||+||++++++.++|+|||.+......
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 81 YMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred cCCCCcHHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 9999999999975422 2378899999999999999999998 9999999999999999999999999998654322
Q ss_pred c-------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 220 K-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 220 ~-------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
. .++..|++||.... ..++.++|+||||+++||++| |..||.+.........+.... ..+
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~---------~~~ 223 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY---------RMP 223 (262)
T ss_pred ccccccCCcccceecCHhHhcc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC---------CCC
Confidence 1 24457999998765 678999999999999999999 888887765544443332211 111
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
.+...+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 2223445788999999999999999999999999875
No 130
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=8e-42 Score=303.61 Aligned_cols=253 Identities=24% Similarity=0.313 Sum_probs=203.5
Q ss_pred CCCCCCceeeccCCeEEEEEEe------CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
.+|...+.||+|+||.||+|.. .++..+++|.+..... .....+.+|+..+++++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL--AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL 82 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH--HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence 4577788999999999999973 2455789998764332 2223578999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHhcccCC------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC
Q 020027 135 IIVSEFINMASLDFYLHENND------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 202 (332)
+++|||+++++|.+++..... ....+++..++.++.|++.|++|||++ +++||||||+||+++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 999999999999999975431 112378999999999999999999999 99999999999999999
Q ss_pred CceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHH
Q 020027 203 FCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALP 273 (332)
Q Consensus 203 ~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~ 273 (332)
+.++++|||++...... ..++..|++||.... ..++.++|||||||++|||+| |..||..........
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 236 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY---RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 236 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999998654321 234667999998876 678899999999999999999 999987765555444
Q ss_pred HhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
.+..+..... +...+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus 237 ~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 237 CITQGRVLER---------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHhCCCCCCC---------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 4433322111 11123468899999999999999999999999998753
No 131
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-42 Score=304.04 Aligned_cols=255 Identities=27% Similarity=0.387 Sum_probs=191.4
Q ss_pred cCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhc--cCCCCCccceeeeeecCC----c
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLS--LAQHPNIVPILGFSQAPG----E 133 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~~~~~~~~~~----~ 133 (332)
.+..+...++|+|+||.||+|.+. ++.||||++... +...|..|..+.+ .++|+||+++++.-...+ .
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~-----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ-----EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc-CceeEEEecCHH-----HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 455667789999999999999984 589999998633 2234566655554 678999999999876554 7
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCC------CCCeeecCCCCCCEEeCCCCceEE
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV------APNIIHGCIKASNILLNEKFCARV 207 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~------~~~ivH~dlk~~Nill~~~~~~kl 207 (332)
++||+||.+.|+|.+|++.+. ++|....+|+..+++||+|||+.. .++|+|||||.+|||+.+++++.|
T Consensus 283 ywLVt~fh~kGsL~dyL~~nt-----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccI 357 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANT-----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCI 357 (534)
T ss_pred eeEEeeeccCCcHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEe
Confidence 899999999999999998764 799999999999999999999753 568999999999999999999999
Q ss_pred ccCCccccCCcc--------cCCcccccCcccccccCCCC---CCchhhhHHHHHHHHHHHhCCCC------------CC
Q 020027 208 CDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGN---ATRESDVYGFGVVLLEILSGRRC------------EE 264 (332)
Q Consensus 208 ~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~---~~~~~DiwS~G~il~el~tg~~p------------~~ 264 (332)
+|||+|...... ..||.+|||||.+++...-+ .-.+.||||+|.+|||++++-.. |.
T Consensus 358 aDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe 437 (534)
T KOG3653|consen 358 ADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFE 437 (534)
T ss_pred eccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchh
Confidence 999999765422 26999999999998652222 22468999999999999986432 21
Q ss_pred ---c--hhHHHHHHHhhhcccccccCCcCCCCCC-hHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 265 ---G--LLVKWALPLIKEMRFSELLDPRLAIPCE-IKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 265 ---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
| ...++....+.. +..+|.++-..- -....-+.+.+..||.+||+.|-|+.=+-+++.++.
T Consensus 438 ~evG~hPt~e~mq~~VV~----kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 438 AEVGNHPTLEEMQELVVR----KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred HHhcCCCCHHHHHHHHHh----hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 0 112222222222 222222221100 023445778999999999999999988888777654
No 132
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4e-42 Score=317.35 Aligned_cols=259 Identities=24% Similarity=0.331 Sum_probs=204.2
Q ss_pred HHHHhcCCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeee
Q 020027 55 EIDAATDGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGF 127 (332)
Q Consensus 55 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~ 127 (332)
++....++|...+.||+|+||.||+|++. +++.||+|.++..... .....+.+|+.++..+. ||||++++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS-SEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh-hHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 35556677888999999999999999842 3468999999754322 22235788999999997 9999999999
Q ss_pred eecCCceeEEEeccCCCCHHHHhcccCC----------------------------------------------------
Q 020027 128 SQAPGERIIVSEFINMASLDFYLHENND---------------------------------------------------- 155 (332)
Q Consensus 128 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~---------------------------------------------------- 155 (332)
+..++..++++||+++|+|.++++....
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999965321
Q ss_pred ------------------------------------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCC
Q 020027 156 ------------------------------------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIK 193 (332)
Q Consensus 156 ------------------------------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 193 (332)
....+++...+.++.|++.||.|||+. +++|||||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlk 266 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLA 266 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCC
Confidence 112367788899999999999999998 99999999
Q ss_pred CCCEEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCC
Q 020027 194 ASNILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEE 264 (332)
Q Consensus 194 ~~Nill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~ 264 (332)
|+|||+++++.+|++|||+++..... ..++..|++||.... ..++.++||||||+++|||++ |..||.
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN---NLYTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC---CCCCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999998753211 134567999998865 568899999999999999998 888987
Q ss_pred chhHHHHH-HHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 265 GLLVKWAL-PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 265 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
.....+.. ..+..+ ...+.+.....++.+++.+||..+|.+|||++++++.|++++
T Consensus 344 ~~~~~~~~~~~~~~~---------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 344 ELPMNEQFYNAIKRG---------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCchHHHHHHHHcC---------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 64333322 222211 011111222347889999999999999999999999999875
No 133
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3e-42 Score=305.01 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=200.5
Q ss_pred CCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
.+|...+.||+|+||.||+|... ++..||+|.++.... ......+.+|+.+++.++||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 34667788999999999999842 357899999874432 11123467899999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHhcccCC------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC
Q 020027 135 IIVSEFINMASLDFYLHENND------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 202 (332)
++++||+++++|.+++..... ....+++..++.++.|++.||.|||++ +++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCC
Confidence 999999999999999853210 112378888999999999999999998 99999999999999999
Q ss_pred CceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHH
Q 020027 203 FCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALP 273 (332)
Q Consensus 203 ~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~ 273 (332)
+.+|++|||+++..... ..++..|++||.... ..++.++|||||||++|||+| |..||.+........
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~ 237 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY---GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIE 237 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 99999999998654321 124568999998865 668899999999999999998 888888766555555
Q ss_pred HhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
.+...... +.+..++..+.+++.+||+.||++|||+.+|++.|++
T Consensus 238 ~i~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIRNRQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHcCCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 44443211 1122334468899999999999999999999999975
No 134
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.8e-42 Score=308.52 Aligned_cols=236 Identities=22% Similarity=0.297 Sum_probs=189.7
Q ss_pred ceeeccCCeEEEEEEe-CCCCEEEEEEeccCccc-ccccccHHHHHHHhcc-CCCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVL-SNAGFGFASVIKTLSL-AQHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|.. .+++.||+|.++..... .........|..++.. ++||||+++++++...+..+++|||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999994 57889999999765321 1222235667777765 4899999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC------
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP------ 217 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~------ 217 (332)
++|..++..... +++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 81 g~L~~~l~~~~~----~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05619 81 GDLMFHIQSCHK----FDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT 153 (316)
T ss_pred CcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCce
Confidence 999999875432 78889999999999999999998 99999999999999999999999999986421
Q ss_pred cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 218 EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 218 ~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
....|+..|+|||.+.. ..++.++|||||||++|||++|+.||.+.........+.... +. .+. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~------~~--~~~--~~~ 220 (316)
T cd05619 154 CTFCGTPDYIAPEILLG---QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN------PC--YPR--WLT 220 (316)
T ss_pred eeecCCccccCHHHHcC---CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------CC--CCc--cCC
Confidence 12257889999999875 678999999999999999999999998766555544333221 11 111 122
Q ss_pred HHHHHHHHHcccCCCCCCCCHH-HHH
Q 020027 298 VRLAKVALACVGNSRKNRPSIV-QVA 322 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~-~i~ 322 (332)
.++.+++.+||+.||++||++. ++.
T Consensus 221 ~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 221 REAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHHHHHhccCHhhcCCChHHHH
Confidence 3677999999999999999997 554
No 135
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.8e-42 Score=301.88 Aligned_cols=253 Identities=25% Similarity=0.325 Sum_probs=201.3
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG 132 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 132 (332)
.+++|...+.||+|+||.||+|... ++..||+|....... ......+.+|+.+++.++|+||+++++++...+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 3567889999999999999999853 467899998764322 222235788999999999999999999998888
Q ss_pred ceeEEEeccCCCCHHHHhcccCC---CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC---ceE
Q 020027 133 ERIIVSEFINMASLDFYLHENND---GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF---CAR 206 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~k 206 (332)
..+++|||+++++|.+++..... ....+++..++.++.||+.|+.|||++ +++||||||+||+++.++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceE
Confidence 89999999999999999976432 123488999999999999999999998 999999999999998654 689
Q ss_pred EccCCccccCCccc--------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhh
Q 020027 207 VCDYGLSFLAPEEK--------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKE 277 (332)
Q Consensus 207 l~dfg~a~~~~~~~--------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~ 277 (332)
++|||+++...... ..+..|++||.+.. ..++.++|||||||++|||++ |..||.+.........+..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~ 236 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD---GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG 236 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhc---CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 99999987653211 12357999999865 678999999999999999997 9999987655554444332
Q ss_pred cccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 278 MRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
.. . ...+...+..+.+++.+||+.||++|||+.++++.|++
T Consensus 237 ~~-------~--~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 237 GG-------R--LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred CC-------c--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 21 0 11112223478899999999999999999999998863
No 136
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.2e-42 Score=310.02 Aligned_cols=237 Identities=19% Similarity=0.255 Sum_probs=192.2
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCC-CccceeeeeecCCceeEEE
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHP-NIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~ 138 (332)
+|...+.||+|+||.||+|. ..+++.||+|.+++..... .....+..|..++..++|+ +|+++++++...+..+++|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47788999999999999998 4578899999997643222 2223467888888888764 6888999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC-
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP- 217 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~- 217 (332)
||+++++|.+++..... +++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 81 E~~~~g~L~~~~~~~~~----~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQVGK----FKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999999875432 78899999999999999999998 99999999999999999999999999986421
Q ss_pred -----cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 218 -----EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 218 -----~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
....|+..|+|||.+.. ..++.++||||+||++|||+||+.||.+.........+.... ...+.
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~--------~~~~~ 222 (324)
T cd05587 154 GGKTTRTFCGTPDYIAPEIIAY---QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN--------VSYPK 222 (324)
T ss_pred CCCceeeecCCccccChhhhcC---CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--------CCCCC
Confidence 11257899999999876 678899999999999999999999998776555544443321 11111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSI 318 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~ 318 (332)
....++.+++.+||+.||.+||+.
T Consensus 223 --~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 223 --SLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred --CCCHHHHHHHHHHhhcCHHHcCCC
Confidence 122367799999999999999986
No 137
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-42 Score=303.77 Aligned_cols=250 Identities=21% Similarity=0.252 Sum_probs=203.5
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-------c-----cccHHHHHHHhccCCCCCcccee
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-------A-----GFGFASVIKTLSLAQHPNIVPIL 125 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-------~-----~~~~~~e~~~l~~l~h~niv~~~ 125 (332)
..++|...+.||+|.||.|-+|+ ..+++.||+|++.+...... . .....+||.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 35789999999999999999999 56899999999976432211 1 12478999999999999999999
Q ss_pred eeeecC--CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC
Q 020027 126 GFSQAP--GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF 203 (332)
Q Consensus 126 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 203 (332)
.+..++ +.+|+|+|||..|.+...- .....+++.++..++.++..||.|||.+ +|+||||||+|+|++++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 998765 6789999999888764321 1122378999999999999999999999 999999999999999999
Q ss_pred ceEEccCCccccCCcc-----------cCCcccccCcccccccC-CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHH
Q 020027 204 CARVCDYGLSFLAPEE-----------KRGLAGYVDDDYWHEKG-GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWA 271 (332)
Q Consensus 204 ~~kl~dfg~a~~~~~~-----------~~~~~~~~~pe~~~~~~-~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~ 271 (332)
++||+|||.+...+.. ..||+.|+|||...... ....+.+.||||+||.||=|+.|+.||.+...-+.
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l 327 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL 327 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH
Confidence 9999999998754211 26999999999876632 34457889999999999999999999998776666
Q ss_pred HHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 272 LPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+..+.+. .+..|...+....+.+|+.++|..||++|.+..+|..
T Consensus 328 ~~KIvn~--------pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 328 FDKIVND--------PLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred HHHHhcC--------cccCCCcccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 6656553 3445544445557889999999999999999988753
No 138
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.9e-41 Score=297.66 Aligned_cols=251 Identities=26% Similarity=0.324 Sum_probs=191.3
Q ss_pred ceeeccCCeEEEEEEeC---CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAALLS---TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|... ++..+|+|.++..... .....+.+|+.+++.++||||+++++++......+++|||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV-QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 36899999999999853 4457999988755422 2223578899999999999999999999998899999999999
Q ss_pred CCHHHHhcccCC-CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc---
Q 020027 144 ASLDFYLHENND-GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE--- 219 (332)
Q Consensus 144 ~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~--- 219 (332)
++|.+++..... .....++..++.++.|++.|+.|||+. +++||||||+||+++.++++|++|||++......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~ 156 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY 156 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence 999999975432 122356778888999999999999998 9999999999999999999999999998643221
Q ss_pred -----cCCcccccCcccccccCC----CCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 220 -----KRGLAGYVDDDYWHEKGG----GNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~----~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
..++..|++||......+ ..++.++|+||||+++|||++ |+.||......+..............++...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLK 236 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccC
Confidence 235667999998864211 246889999999999999997 9999976544443322222111111122211
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 290 IPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 290 ~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
. .....+.+++.+|| .+|++|||++||++.|+
T Consensus 237 ~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 237 L----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred C----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1 12235778999999 58999999999999875
No 139
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=8.6e-42 Score=302.96 Aligned_cols=256 Identities=21% Similarity=0.327 Sum_probs=203.5
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP 131 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 131 (332)
...++|+..+.||+|+||.||+|... .+..||+|.+..... ......+.+|+..++.++|+||+++++++...
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 45678999999999999999999732 345899998764432 12223567899999999999999999999988
Q ss_pred CceeEEEeccCCCCHHHHhcccCC------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCce
Q 020027 132 GERIIVSEFINMASLDFYLHENND------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCA 205 (332)
Q Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 205 (332)
+..+++|||+++++|.+++..... .....++..+..++.|++.||.|||++ +++||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcE
Confidence 999999999999999999975321 122356778889999999999999998 99999999999999999999
Q ss_pred EEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhh
Q 020027 206 RVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIK 276 (332)
Q Consensus 206 kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~ 276 (332)
+++|||+++..... ..++..|++||.+.. ..++.++|+|||||++||+++ |..||.+.........+.
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~---~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 235 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhcc---CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99999998753221 123567999998876 678899999999999999999 788888765555444433
Q ss_pred hcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 277 EMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
.+.... . +......+.+++.+||+.||++|||+.++++.|++.+
T Consensus 236 ~~~~~~-------~--~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 236 DGGYLD-------Q--PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred cCCCCC-------C--CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 322111 1 1122347889999999999999999999999998754
No 140
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.2e-42 Score=303.79 Aligned_cols=243 Identities=21% Similarity=0.225 Sum_probs=189.8
Q ss_pred eeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCH
Q 020027 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASL 146 (332)
Q Consensus 69 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 146 (332)
||+|+||+||++. ..+++.+|+|.+........ ....+..|+.+++.++|+||+++.+++...+..+++|||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 6999999999998 45889999999875433222 122467899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc------c
Q 020027 147 DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE------K 220 (332)
Q Consensus 147 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~------~ 220 (332)
..++.........+++..++.++.|++.||.|||+. +++||||||+||++++++.+||+|||++...... .
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 988754332233488999999999999999999998 9999999999999999999999999998654322 2
Q ss_pred CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHH
Q 020027 221 RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRL 300 (332)
Q Consensus 221 ~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (332)
.++..|++||.+.. ..++.++|||||||++|||++|+.||............... ........ +......+
T Consensus 158 ~g~~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~ 228 (280)
T cd05608 158 AGTPGFMAPELLQG---EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR----ILNDSVTY--PDKFSPAS 228 (280)
T ss_pred CCCcCccCHHHhcC---CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHh----hcccCCCC--cccCCHHH
Confidence 57889999999876 67889999999999999999999999754221111111111 11111111 12233467
Q ss_pred HHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 301 AKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 301 ~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
.+++.+||+.||++|| |++++++
T Consensus 229 ~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 229 KSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 7999999999999999 6666664
No 141
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.9e-41 Score=296.20 Aligned_cols=250 Identities=23% Similarity=0.381 Sum_probs=205.5
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
...++|...+.||+|+||.||+|..+++..+|+|.+..... ....+.+|+..++.++|+|++++++++...+..+++
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence 34578899999999999999999987778999999875432 223578999999999999999999999988899999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||+++++|.+++..... ..+++.++..++.|++.|+.|||++ +++|+||+|+||++++++.+|++|||.+....
T Consensus 80 ~e~~~~~~L~~~i~~~~~--~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 154 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEG--KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIE 154 (261)
T ss_pred EeccCCCCHHHHHhcccc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceecc
Confidence 999999999999976432 2378999999999999999999998 99999999999999999999999999987654
Q ss_pred cc-------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 218 EE-------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 218 ~~-------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
+. ...+..|++||.... ...+.++|+||||+++||++| |+.||.+.........+.... .
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~---------~ 222 (261)
T cd05034 155 DDEYTAREGAKFPIKWTAPEAANY---GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY---------R 222 (261)
T ss_pred chhhhhhhccCCCccccCHHHhcc---CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---------C
Confidence 21 123457999998865 668899999999999999999 999998765554444333211 1
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 290 IPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 290 ~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
.+.+...+.++.+++.+||+.||++|||++++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 11111223478899999999999999999999999875
No 142
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.1e-41 Score=303.23 Aligned_cols=259 Identities=21% Similarity=0.309 Sum_probs=198.1
Q ss_pred cCCCCCCceeeccCCeEEEEEEeCC---------------CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccce
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLST---------------GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPI 124 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~ 124 (332)
.++|...+.||+|+||.||++.... ...||+|.++.... ......+.+|++++++++|+|++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 4578899999999999999987421 23589999875432 2223357899999999999999999
Q ss_pred eeeeecCCceeEEEeccCCCCHHHHhcccCC--------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCC
Q 020027 125 LGFSQAPGERIIVSEFINMASLDFYLHENND--------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASN 196 (332)
Q Consensus 125 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 196 (332)
++++...+..+++|||+++++|.+++..... ....+++..++.++.|++.|+.|||++ +++|+||||+|
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N 159 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRN 159 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhh
Confidence 9999999999999999999999999864321 112367889999999999999999998 99999999999
Q ss_pred EEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh--CCCCCCch
Q 020027 197 ILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS--GRRCEEGL 266 (332)
Q Consensus 197 ill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t--g~~p~~~~ 266 (332)
|++++++.+|++|||++...... ..++..|++||.... ..++.++|+|||||++|||++ +..||...
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~ 236 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL---GKFTTASDVWAFGVTLWEMFTLCKEQPYSLL 236 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc---CCcCchhhHHHHHHHHHHHHHcCCCCCCccc
Confidence 99999999999999998654321 123567999998875 668999999999999999998 56787765
Q ss_pred hHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
............ +... ........+...+..+.+++.+||+.||++|||+.+|++.|++
T Consensus 237 ~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 237 SDEQVIENTGEF-FRNQ-GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred ChHHHHHHHHHh-hhhc-cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 443332222110 0000 0000011111223478899999999999999999999999864
No 143
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.2e-41 Score=295.05 Aligned_cols=248 Identities=26% Similarity=0.397 Sum_probs=204.0
Q ss_pred cCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.++|...+.||.|+||.||+|... |+.||+|.+..... ....+.+|+.+++.++|+|++++++++...+..+++||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 457888999999999999999864 78999999875532 23457899999999999999999999998899999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+++++|.+++..... ..+++..+..++.|++.|+.|||++ +++|+||||+||+++.++.+||+|||.++.....
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 81 YMAKGSLVDYLRSRGR--AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred ecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 9999999999976432 2378999999999999999999998 9999999999999999999999999998765433
Q ss_pred c---CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 220 K---RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 220 ~---~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
. ..+..|++||.... ..++.++|+||||+++||+++ |..||...........+.... . ...+..
T Consensus 156 ~~~~~~~~~~~ape~~~~---~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-------~--~~~~~~ 223 (256)
T cd05039 156 QDSGKLPVKWTAPEALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-------R--MEAPEG 223 (256)
T ss_pred cccCCCcccccCchhhcC---CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC-------C--CCCccC
Confidence 2 23457999998865 678889999999999999998 999987765554433333211 0 111112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 296 PLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
.+..+.+++.+||+.+|++|||++++++.|+++
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 224 CPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 234788999999999999999999999999764
No 144
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.7e-41 Score=299.62 Aligned_cols=253 Identities=20% Similarity=0.364 Sum_probs=203.7
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCC----EEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
.++|...+.||+|+||.||+|.. .+|+ .+|+|....... ......+.+|+..++.++|+|++++++++.. ...
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 35678889999999999999984 3343 689998765432 2223357889999999999999999999987 778
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
++++||+++++|.+++.+... .+++..++.++.|++.|++|||++ +++||||||+||++++++.+||+|||.++
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKD---NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred EEEEecCCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccc
Confidence 999999999999999976433 278999999999999999999998 99999999999999999999999999987
Q ss_pred cCCccc--------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccC
Q 020027 215 LAPEEK--------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 215 ~~~~~~--------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
...... .++..|++||.... ..++.++|+||||+++||++| |+.||.+....+....+..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------ 228 (279)
T cd05057 158 LLDVDEKEYHAEGGKVPIKWMALESILH---RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE------ 228 (279)
T ss_pred cccCcccceecCCCcccccccCHHHhhc---CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC------
Confidence 654221 12457999998765 678899999999999999999 999998766555444333321
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccCC
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGDP 332 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~~~ 332 (332)
..+.+..+...+.+++.+||..||++|||+.++++.|.++..+|
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 229 ---RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 11111122346789999999999999999999999999987664
No 145
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=6e-42 Score=307.95 Aligned_cols=236 Identities=22% Similarity=0.291 Sum_probs=189.6
Q ss_pred ceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhcc-CCCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSL-AQHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|+. .+|+.||+|.++...... ........|..++.. .+||||+++++++...+..+++|||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999994 578999999997643221 222235667777764 4899999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC------
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP------ 217 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~------ 217 (332)
++|..++..... +++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++...
T Consensus 81 g~L~~~i~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05620 81 GDLMFHIQDKGR----FDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA 153 (316)
T ss_pred CcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce
Confidence 999998876432 78889999999999999999998 99999999999999999999999999986421
Q ss_pred cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 218 EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 218 ~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
....|+..|+|||.+.. ..++.++|||||||++|||++|+.||.+.........+.... +. .+.. ..
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~------~~--~~~~--~~ 220 (316)
T cd05620 154 STFCGTPDYIAPEILQG---LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT------PH--YPRW--IT 220 (316)
T ss_pred eccCCCcCccCHHHHcC---CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------CC--CCCC--CC
Confidence 12357899999999876 678899999999999999999999998766555444433221 11 1111 22
Q ss_pred HHHHHHHHHcccCCCCCCCCHH-HHH
Q 020027 298 VRLAKVALACVGNSRKNRPSIV-QVA 322 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~-~i~ 322 (332)
.++.+++.+||+.||++||++. ++.
T Consensus 221 ~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 221 KESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHHH
Confidence 3677999999999999999984 554
No 146
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.8e-41 Score=295.59 Aligned_cols=247 Identities=26% Similarity=0.367 Sum_probs=199.3
Q ss_pred cCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeee-cCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQ-APGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~ 138 (332)
.++|...+.||+|+||.||++.. .|..+|+|..+... ....+.+|+..+++++|+|++++++++. ..+..++++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 34688889999999999999986 47889999886432 2235789999999999999999999764 556789999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... ..+++..++.++.|++.||+|||++ +++||||||+||++++++.+|++|||++.....
T Consensus 80 e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 80 EYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred ECCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 99999999999876432 2378899999999999999999998 999999999999999999999999999875432
Q ss_pred c---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 219 E---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 219 ~---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
. ...+..|++||.+.. ..++.++|||||||++|||++ |+.||...........+..+. ....+.
T Consensus 155 ~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~---------~~~~~~ 222 (256)
T cd05082 155 TQDTGKLPVKWTAPEALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY---------KMDAPD 222 (256)
T ss_pred cCCCCccceeecCHHHHcc---CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC---------CCCCCC
Confidence 2 234567999998865 678899999999999999998 999987655444433332211 011111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
..+..+.+++.+||+.||++|||+.++++.|+++
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 223 GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 2234788999999999999999999999999864
No 147
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.6e-41 Score=298.42 Aligned_cols=248 Identities=27% Similarity=0.374 Sum_probs=194.8
Q ss_pred ceeeccCCeEEEEEEe-CCCC--EEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCCceeEEEeccC
Q 020027 67 RIIGQGRLGTVYAALL-STGK--LVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIVSEFIN 142 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~-~~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 142 (332)
+.||+|+||.||+|.. +++. .+++|.++... .......+.+|+.++.++ +||||+++++++...+..+++|||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 3689999999999995 3444 46888876322 122223578899999999 79999999999999999999999999
Q ss_pred CCCHHHHhcccCC------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 143 MASLDFYLHENND------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 143 ~~~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
+++|.+++..... ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCC
Confidence 9999999875321 112478899999999999999999998 9999999999999999999999999
Q ss_pred CccccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhccccccc
Q 020027 211 GLSFLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELL 284 (332)
Q Consensus 211 g~a~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 284 (332)
|++...... ...+..|++||+... ..++.++|||||||++|||+| |..||.+.........+....
T Consensus 157 gl~~~~~~~~~~~~~~~~~~y~apE~~~~---~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~----- 228 (270)
T cd05047 157 GLSRGQEVYVKKTMGRLPVRWMAIESLNY---SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY----- 228 (270)
T ss_pred CCccccchhhhccCCCCccccCChHHHcc---CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC-----
Confidence 998533211 123456999998865 678899999999999999997 999997765444433332211
Q ss_pred CCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 285 DPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
. .+.+......+.+++.+||+.||.+|||+.++++.|++++.
T Consensus 229 --~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~~ 270 (270)
T cd05047 229 --R--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 270 (270)
T ss_pred --C--CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhhC
Confidence 1 11111223467899999999999999999999999998763
No 148
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.6e-42 Score=316.41 Aligned_cols=255 Identities=18% Similarity=0.253 Sum_probs=201.0
Q ss_pred HHHhcCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCc
Q 020027 56 IDAATDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGE 133 (332)
Q Consensus 56 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 133 (332)
.....++|...+.||+|+||.||+++. .+++.+|+|.+.+..... .....+.+|+.+++.++||||+++++++..++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 334467899999999999999999994 578899999986532222 222346789999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
.+++|||+++++|.+++.... +++..+..++.|++.||.|||++ +|+||||||+|||+++++.+||+|||++
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~~-----~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a 189 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNYD-----VPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTC 189 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccc
Confidence 999999999999999996532 68888999999999999999998 9999999999999999999999999998
Q ss_pred ccCCc-------ccCCcccccCcccccccC-CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccC
Q 020027 214 FLAPE-------EKRGLAGYVDDDYWHEKG-GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 214 ~~~~~-------~~~~~~~~~~pe~~~~~~-~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
..... ...||..|+|||.+.... ...++.++||||+||++|||+||+.||.+.........+....
T Consensus 190 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~------ 263 (370)
T cd05621 190 MKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK------ 263 (370)
T ss_pred eecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------
Confidence 75432 235899999999986532 2347889999999999999999999998765544444333211
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKN--RPSIVQVATI 324 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~--RPs~~~i~~~ 324 (332)
..+..+........+.+++..|++.++.. |||+.|+++.
T Consensus 264 ~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 264 NSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 11222222222346678888999755543 8899998764
No 149
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.8e-41 Score=301.82 Aligned_cols=259 Identities=23% Similarity=0.322 Sum_probs=201.6
Q ss_pred cCCCCCCceeeccCCeEEEEEEeC-----------------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCcc
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLS-----------------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 122 (332)
..+|...+.||+|+||.||++... .+..||+|.+...... .....+.+|+.++++++|||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHHHHHHHHHhcCCCCEe
Confidence 457889999999999999998743 2246899998755332 2233578899999999999999
Q ss_pred ceeeeeecCCceeEEEeccCCCCHHHHhcccCCC-------CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCC
Q 020027 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDG-------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKAS 195 (332)
Q Consensus 123 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~ 195 (332)
++++++..++..++++|++++++|.+++...... ...+++..++.++.|++.||+|||+. +++||||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~ 159 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATR 159 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchh
Confidence 9999999999999999999999999999765411 12478999999999999999999998 9999999999
Q ss_pred CEEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh--CCCCCCc
Q 020027 196 NILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS--GRRCEEG 265 (332)
Q Consensus 196 Nill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t--g~~p~~~ 265 (332)
||++++++.++++|||+++..... ..++..|++||.... ..++.++|||||||++|||++ +..||..
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL---GKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc---CCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 999999999999999998754221 134567999998875 578999999999999999998 6678866
Q ss_pred hhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 266 LLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
....+........... .......+.+...+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 237 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 237 LTDQQVIENAGHFFRD--DGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred cChHHHHHHHHhcccc--ccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 5444443333221000 00111111122233578899999999999999999999998863
No 150
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-43 Score=300.86 Aligned_cols=250 Identities=22% Similarity=0.244 Sum_probs=192.5
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC--C---cee
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--G---ERI 135 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~---~~~ 135 (332)
.|...+++|.|+||.||+|. .++++.||||++-.+.. . -.+|+++|++++|||||++.-++... + ...
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~--knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----Y--KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----c--CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 56778999999999999999 56789999999865432 2 26789999999999999998877433 2 345
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC-CceEEccCCccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK-FCARVCDYGLSF 214 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~dfg~a~ 214 (332)
+||||+| .+|.++++........++...+.-+..|+.+||+|||+. +|+||||||.|+|+|.+ |.+||||||.|+
T Consensus 99 lVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 8999997 589998885332233367777888999999999999998 99999999999999964 999999999998
Q ss_pred cCCccc-----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh------------
Q 020027 215 LAPEEK-----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE------------ 277 (332)
Q Consensus 215 ~~~~~~-----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~------------ 277 (332)
...... ..+..|.|||.+.+. ..|+.+.||||.||++.||+-|++-|.|......+..+..
T Consensus 175 ~L~~~epniSYicSRyYRaPELifga--~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 175 VLVKGEPNISYICSRYYRAPELIFGA--TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred eeccCCCceeEEEeccccCHHHHcCc--cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 764332 346789999998875 8899999999999999999999999988655554433221
Q ss_pred ccc--ccccCCcCCCC-----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 278 MRF--SELLDPRLAIP-----CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 278 ~~~--~~~~~~~~~~~-----~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.. .+...+.+... .......++.+++.++++++|.+|.|+.|+++
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 100 01111111111 11223447889999999999999999998875
No 151
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.3e-41 Score=294.70 Aligned_cols=246 Identities=23% Similarity=0.400 Sum_probs=198.6
Q ss_pred CCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
++|.....||+|+||.||+|....+..+|+|.+..... ....+.+|+.+++.++|+|++++++++. .+..+++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 45778889999999999999977777899998865432 2235688999999999999999999875 4567899999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 82 MGKGSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 999999999975432 2378999999999999999999998 9999999999999999999999999998754322
Q ss_pred ------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 220 ------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 220 ------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
..++..|++||.... ...+.++||||||+++||++| |..||.+.........+.... ..+.
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---------~~~~ 224 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY---------RMPC 224 (260)
T ss_pred ccccCCCccchhhCCHHHhcc---CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---------CCCC
Confidence 124567999998765 678899999999999999999 899998765544443332211 1111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
+...+..+.+++.+||+.||++|||+.++++.|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 12233478899999999999999999999999975
No 152
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.8e-42 Score=305.98 Aligned_cols=257 Identities=24% Similarity=0.336 Sum_probs=204.5
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeC--------CCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeee
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLS--------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFS 128 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 128 (332)
...++|...+.||+|+||.||+++.. ++..+|+|.++.... ......+..|+.+++.+ +|+||+++++++
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-hHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 33567899999999999999999731 235799999875422 22223467899999999 799999999999
Q ss_pred ecCCceeEEEeccCCCCHHHHhcccCCC------------CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCC
Q 020027 129 QAPGERIIVSEFINMASLDFYLHENNDG------------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASN 196 (332)
Q Consensus 129 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 196 (332)
...+..+++|||+++++|.+++...... ...+++.+++.++.|++.||+|||++ +++||||||+|
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 170 (307)
T cd05098 94 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 170 (307)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHh
Confidence 9999999999999999999999764321 12378899999999999999999998 99999999999
Q ss_pred EEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchh
Q 020027 197 ILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLL 267 (332)
Q Consensus 197 ill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~ 267 (332)
|+++.++.+|++|||.+...... ..++..|++||.... ..++.++|+|||||++|||++ |..||.+..
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~~~g~~p~~~~~ 247 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD---RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc---CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 99999999999999998654321 123357999998865 568899999999999999998 888887766
Q ss_pred HHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 268 VKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
.......+.... . .+.+.....++.+++.+||..+|++|||+.++++.|.++..
T Consensus 248 ~~~~~~~~~~~~-------~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 248 VEELFKLLKEGH-------R--MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred HHHHHHHHHcCC-------C--CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 555444443321 1 11112223477899999999999999999999999998763
No 153
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.6e-42 Score=309.11 Aligned_cols=237 Identities=21% Similarity=0.261 Sum_probs=192.8
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-ccccHHHHHHHhccC-CCCCccceeeeeecCCceeEEE
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 138 (332)
+|...+.||+|+||.||+|+ ..+++.||+|.+++...... .......|..++..+ +|++|+++++++...+..+++|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 47788999999999999998 45788999999976533222 122356677777666 5899999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC-
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP- 217 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~- 217 (332)
||+++++|..++..... +++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~~~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQVGR----FKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999998865432 78899999999999999999998 99999999999999999999999999986432
Q ss_pred -----cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 218 -----EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 218 -----~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
....|+..|+|||.+.. ..++.++|||||||++|||+||+.||.+.........+.... ...+.
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~--------~~~p~ 222 (323)
T cd05616 154 DGVTTKTFCGTPDYIAPEIIAY---QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--------VAYPK 222 (323)
T ss_pred CCCccccCCCChhhcCHHHhcC---CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--------CCCCC
Confidence 12357899999999876 678999999999999999999999998876665555444322 11111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSI 318 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~ 318 (332)
....++.+++.+|++.||++|++.
T Consensus 223 --~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 223 --SMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred --cCCHHHHHHHHHHcccCHHhcCCC
Confidence 123367899999999999999985
No 154
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2e-42 Score=318.35 Aligned_cols=246 Identities=20% Similarity=0.194 Sum_probs=195.3
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||+++ ..+++.||+|.+....... .....+.+|+.+++.++|+||+++++.+..++..+++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 368889999999999999999 5678999999986543222 22234678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC-
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP- 217 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~- 217 (332)
||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 81 E~~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 81 DYIPGGDMMSLLIRLG----IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 9999999999997643 278888889999999999999998 99999999999999999999999999874210
Q ss_pred ------------------------------------------------cccCCcccccCcccccccCCCCCCchhhhHHH
Q 020027 218 ------------------------------------------------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGF 249 (332)
Q Consensus 218 ------------------------------------------------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~ 249 (332)
....||..|+|||.+.. ..++.++|||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSl 230 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR---TGYTQLCDWWSV 230 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC---CCCCcceeeeec
Confidence 01247889999999876 678899999999
Q ss_pred HHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCC---CHHHHHH
Q 020027 250 GVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRP---SIVQVAT 323 (332)
Q Consensus 250 G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RP---s~~~i~~ 323 (332)
||++|||++|+.||.+....+....+.... ..+..+........+.+++.+|+ .+|.+|+ |+.++++
T Consensus 231 Gvilyell~G~~Pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 231 GVILYEMLVGQPPFLADTPAETQLKVINWE------TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred cceeeehhhCCCCCCCCCHHHHHHHHhccC------ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 999999999999998766554433332211 11111211122335667777776 4999999 8888875
No 155
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.2e-41 Score=304.03 Aligned_cols=256 Identities=23% Similarity=0.367 Sum_probs=202.8
Q ss_pred HHhcCCCCCCceeeccCCeEEEEEEe------CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeee
Q 020027 57 DAATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQ 129 (332)
Q Consensus 57 ~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 129 (332)
....++|...+.||+|+||.||++.. .++..||+|.++.... ......+.+|+.+++++ +|+||+++++++.
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 109 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACT 109 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence 34556799999999999999999973 2345899998875432 22223578899999999 7999999999999
Q ss_pred cCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEcc
Q 020027 130 APGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCD 209 (332)
Q Consensus 130 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~d 209 (332)
..+..+++|||+++++|.+++..... ..+++.+...++.|++.|+.|||++ +++|+||||+||+++.++.++++|
T Consensus 110 ~~~~~~lv~e~~~~~~L~~~i~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~d 184 (302)
T cd05055 110 IGGPILVITEYCCYGDLLNFLRRKRE--SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICD 184 (302)
T ss_pred cCCceEEEEEcCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECC
Confidence 99999999999999999999975432 2378999999999999999999998 999999999999999999999999
Q ss_pred CCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhccc
Q 020027 210 YGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRF 280 (332)
Q Consensus 210 fg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 280 (332)
||+++..... ..++..|++||.... ..++.++|||||||++||++| |..||.+...............
T Consensus 185 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~ 261 (302)
T cd05055 185 FGLARDIMNDSNYVVKGNARLPVKWMAPESIFN---CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY 261 (302)
T ss_pred CcccccccCCCceeecCCCCcccccCCHhhhcc---CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCC
Confidence 9998754322 124567999998866 668899999999999999998 9999876544332211111111
Q ss_pred ccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 281 SELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
....+.....++.+++.+||+.+|++|||+.|+++.|++++
T Consensus 262 --------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~~ 302 (302)
T cd05055 262 --------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQL 302 (302)
T ss_pred --------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhhC
Confidence 11111112347889999999999999999999999998763
No 156
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.2e-41 Score=301.83 Aligned_cols=253 Identities=24% Similarity=0.361 Sum_probs=202.9
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG 132 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 132 (332)
..++|...+.||+|+||.||++... ++..+|+|.+..... ......+.+|+.+++.++|||++++++++...+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC-HHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 3467889999999999999999842 567899999875432 122235788999999999999999999999989
Q ss_pred ceeEEEeccCCCCHHHHhcccCC------------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCC
Q 020027 133 ERIIVSEFINMASLDFYLHENND------------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKA 194 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~ 194 (332)
..++++||+++++|.+++..... ....+++..++.++.|++.||.|||++ +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 99999999999999999964321 112367888999999999999999998 999999999
Q ss_pred CCEEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCc
Q 020027 195 SNILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEG 265 (332)
Q Consensus 195 ~Nill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~ 265 (332)
+||++++++.++++|||++...... ...+..|++||.... ..++.++|||||||++|||++ |..||.+
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY---NRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc---CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999998643211 123456999998765 678999999999999999998 8889877
Q ss_pred hhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 266 LLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
....+....+..+... +.+.....++.+++.+||+.||++|||+.|+++.|++
T Consensus 236 ~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 236 MAHEEVIYYVRDGNVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCHHHHHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 6555554444333211 1111233578899999999999999999999999874
No 157
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.4e-41 Score=301.28 Aligned_cols=258 Identities=23% Similarity=0.340 Sum_probs=197.7
Q ss_pred CCCCCCceeeccCCeEEEEEEeC-----------------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccc
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLS-----------------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP 123 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 123 (332)
++|+..+.||+|+||.||++... ++..+|+|.+..... ......+.+|+..++.++|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcce
Confidence 46888999999999999998532 244799998875421 222235789999999999999999
Q ss_pred eeeeeecCCceeEEEeccCCCCHHHHhcccCCC-------CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCC
Q 020027 124 ILGFSQAPGERIIVSEFINMASLDFYLHENNDG-------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASN 196 (332)
Q Consensus 124 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 196 (332)
+++++..++..+++|||+++++|.+++...... ...+++.++..++.|++.|++|||+. +++|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 999999999999999999999999998764321 12367889999999999999999998 99999999999
Q ss_pred EEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh--CCCCCCch
Q 020027 197 ILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS--GRRCEEGL 266 (332)
Q Consensus 197 ill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t--g~~p~~~~ 266 (332)
|+++.++.++++|||+++..... ...+..|++||.... ..++.++|+|||||++|||+| |..||...
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL---GKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc---CCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 99999999999999998754321 122457899997765 678999999999999999998 67788765
Q ss_pred hHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
............ +... ......+.+..++..+.+++.+||+.||++|||+.++++.|++
T Consensus 238 ~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 238 SDEQVIENTGEF-FRDQ-GRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ChHHHHHHHHHH-Hhhc-cccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 443332211110 0000 0001111122233578899999999999999999999999874
No 158
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.6e-41 Score=298.12 Aligned_cols=248 Identities=25% Similarity=0.411 Sum_probs=199.7
Q ss_pred CCCCCceeeccCCeEEEEEEeC-CC---CEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 62 GFSHRRIIGQGRLGTVYAALLS-TG---KLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
.|...+.||+|+||.||+|... ++ ..||+|.++.... ......+..|+..++.++||||+++++++..++..+++
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 4677889999999999999843 33 3699999875422 22334678999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||+++++|.+++..... .+++.+++.++.|++.|+.|||++ +++|+||||+||+++.++.+|++|||++....
T Consensus 84 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 84 TEFMENGALDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EecCCCCcHHHHHhhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 999999999999876432 378999999999999999999998 99999999999999999999999999986543
Q ss_pred ccc--------C---CcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccC
Q 020027 218 EEK--------R---GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 218 ~~~--------~---~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
... . .+..|++||.... ..++.++|||||||++||+++ |..||.+.........+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~------- 227 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAY---RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD------- 227 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhcc---CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-------
Confidence 221 1 1236999998875 678899999999999999987 99999776554443333221
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
...+.+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 228 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 --YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111223344678999999999999999999999999875
No 159
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4e-42 Score=317.02 Aligned_cols=245 Identities=19% Similarity=0.189 Sum_probs=192.8
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccc-ccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVL-SNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.|...+.||+|+||.||+|+ ..+++.||+|.+...... ......+.+|+.+++.++|+||+++++.+...+..+++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 57888999999999999999 567899999998754322 1223357889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC--
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP-- 217 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~-- 217 (332)
|+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIRMG----IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 999999999987543 278888899999999999999998 99999999999999999999999999864210
Q ss_pred ---------------------------------------------------cccCCcccccCcccccccCCCCCCchhhh
Q 020027 218 ---------------------------------------------------EEKRGLAGYVDDDYWHEKGGGNATRESDV 246 (332)
Q Consensus 218 ---------------------------------------------------~~~~~~~~~~~pe~~~~~~~~~~~~~~Di 246 (332)
....||..|+|||.+.. ..++.++||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~~Di 231 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR---TGYTQLCDW 231 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC---CCCCCeeeE
Confidence 01247889999999876 678899999
Q ss_pred HHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 020027 247 YGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPS---IVQVAT 323 (332)
Q Consensus 247 wS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs---~~~i~~ 323 (332)
||+||++|||+||+.||.+....+....+.... ..+..+.......++.+++.+++ .||++|++ +.++++
T Consensus 232 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 232 WSVGVILYEMLVGQPPFLAQTPLETQMKVINWQ------TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred EechHHHHHHHhCCCCCCCCCHHHHHHHHHccC------CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999999999999998765544433332211 11112211122235667776665 49999997 777654
No 160
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-41 Score=312.57 Aligned_cols=245 Identities=20% Similarity=0.220 Sum_probs=190.1
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|+..+.||+|+||.||++. ..+++.||+|.... ..+.+|+.+++.++||||+++++++...+..++++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 4679999999999999999999 56889999996532 23588999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
|++. ++|..++..... +++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 163 e~~~-~~L~~~l~~~~~----l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 163 PRYK-TDLYCYLAAKRN----IAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred ecCC-CCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 9995 688888865432 78899999999999999999998 999999999999999999999999999864321
Q ss_pred -------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh-------HHHHHHHhhh--cc---
Q 020027 219 -------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL-------VKWALPLIKE--MR--- 279 (332)
Q Consensus 219 -------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~-------~~~~~~~~~~--~~--- 279 (332)
...||..|+|||.+.. ..++.++|||||||++|||+||+.|+.+.. .......+.. +.
T Consensus 235 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~ 311 (391)
T PHA03212 235 INANKYYGWAGTIATNAPELLAR---DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPN 311 (391)
T ss_pred ccccccccccCccCCCChhhhcC---CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChh
Confidence 1258899999999876 678999999999999999999998764321 0011111100 00
Q ss_pred ---------cc-------cc--cCCcCCCC--CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 ---------FS-------EL--LDPRLAIP--CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 ---------~~-------~~--~~~~~~~~--~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.. .. ..+..... .......++.+++.+||+.||++|||++|+++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 312 EFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 00 00000000 00122346889999999999999999999985
No 161
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4e-42 Score=310.08 Aligned_cols=233 Identities=24% Similarity=0.245 Sum_probs=187.4
Q ss_pred ceeeccCCeEEEEEEe-CCCCEEEEEEeccCccccc-ccccHHHHHH-HhccCCCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSN-AGFGFASVIK-TLSLAQHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||+||+|+. .+|+.||+|.+........ ....+..|.. .++.++||||+++++.+...+..+++|||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999994 5899999999875432221 2223444544 46788999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-----
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----- 218 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~----- 218 (332)
++|..++..... +++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (323)
T cd05575 81 GELFFHLQRERS----FPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTT 153 (323)
T ss_pred CCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcc
Confidence 999998875432 78889999999999999999998 999999999999999999999999999864321
Q ss_pred -ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 219 -EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 219 -~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
...|+..|++||.+.. ..++.++|||||||++|||++|+.||.+.........+..... ..+. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--------~~~~--~~~ 220 (323)
T cd05575 154 STFCGTPEYLAPEVLRK---QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL--------RLKP--NIS 220 (323)
T ss_pred ccccCChhhcChhhhcC---CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC--------CCCC--CCC
Confidence 1247889999999876 6788999999999999999999999987665554444433211 1111 113
Q ss_pred HHHHHHHHHcccCCCCCCCCHH
Q 020027 298 VRLAKVALACVGNSRKNRPSIV 319 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~ 319 (332)
..+.+++.+||+.||++||++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 221 VSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHHhhcCHHhCCCCC
Confidence 3678999999999999999985
No 162
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.6e-41 Score=294.82 Aligned_cols=242 Identities=20% Similarity=0.327 Sum_probs=194.4
Q ss_pred ceeeccCCeEEEEEEe-C---CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccC
Q 020027 67 RIIGQGRLGTVYAALL-S---TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFIN 142 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~-~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 142 (332)
+.||+|+||.||+|.. . ++..+|+|.+...... .....+.+|+++++.++|+|++++++++.. +..+++|||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCC
Confidence 4699999999999973 2 2368999998765443 233357889999999999999999998764 45789999999
Q ss_pred CCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc--
Q 020027 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK-- 220 (332)
Q Consensus 143 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~-- 220 (332)
+++|.+++.... .+++..++.++.|++.|+.|||+. +++|+||||+||+++.++.+|++|||+++......
T Consensus 79 ~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 79 LGPLLKYLKKRR----EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 999999997654 278999999999999999999998 99999999999999999999999999987543221
Q ss_pred -------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 221 -------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 221 -------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
.++..|++||.... ..++.++||||||+++||+++ |..||...........+..... .+.
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------~~~ 219 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINY---GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER---------LPR 219 (257)
T ss_pred cccccCccccccccCHHHhcC---CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc---------CCC
Confidence 12356999998865 678899999999999999998 9999976654444443333211 111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
+......+.+++.+||+.||++|||+.++++.|++.-
T Consensus 220 ~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 220 PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 1223347889999999999999999999999998753
No 163
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.1e-41 Score=300.23 Aligned_cols=253 Identities=20% Similarity=0.238 Sum_probs=190.4
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccC---CCCCccceeeeeec-----CC
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA---QHPNIVPILGFSQA-----PG 132 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~~ 132 (332)
+|...+.||+|+||.||+|+ ..+++.||+|.++.............+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 47788999999999999998 55889999999876543333233455677666654 79999999998754 24
Q ss_pred ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCc
Q 020027 133 ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~ 212 (332)
..++++|+++ ++|.+++..... ..+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 5789999997 588888865432 2378999999999999999999998 999999999999999999999999999
Q ss_pred cccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------cc
Q 020027 213 SFLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-------RF 280 (332)
Q Consensus 213 a~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-------~~ 280 (332)
+...... ..++..|+|||.+.. ..++.++||||+||++|||++|++||.+.........+... .+
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 155 ARIYSCQMALTPVVVTLWYRAPEVLLQ---STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred cccccCcccCCCccccccccCchHhhC---CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhC
Confidence 8765322 246788999999875 67899999999999999999999999765443332222110 00
Q ss_pred ccc-------cCCcCCC---CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 281 SEL-------LDPRLAI---PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 281 ~~~-------~~~~~~~---~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
... ..+.... .........+.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 0000000 000122346779999999999999999999875
No 164
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=9.7e-42 Score=308.28 Aligned_cols=232 Identities=22% Similarity=0.291 Sum_probs=185.7
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccc-cccHHHHHHHhccC-CCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+++ ..+++.||+|.++........ ...+..|..++..+ +||||+++++++...+..+++|||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 469999999999999 457899999999865432222 22467888888888 799999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC------
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP------ 217 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~------ 217 (332)
++|..++..... +++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++...
T Consensus 81 g~L~~~~~~~~~----l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (329)
T cd05588 81 GDLMFHMQRQRK----LPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT 153 (329)
T ss_pred CCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCcc
Confidence 999988865432 88999999999999999999998 99999999999999999999999999986421
Q ss_pred cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh---------HHHHHHHhhhcccccccCCcC
Q 020027 218 EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL---------VKWALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 218 ~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 288 (332)
....|+..|+|||.+.. ..++.++|+|||||++|||+||+.||.... .+.....+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 222 (329)
T cd05588 154 STFCGTPNYIAPEILRG---EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE--------KQI 222 (329)
T ss_pred ccccCCccccCHHHHcC---CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc--------CCC
Confidence 12357889999999876 678899999999999999999999996321 1111122221 112
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCH
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSI 318 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~ 318 (332)
..+.. ...++.+++.+||+.||.+|||+
T Consensus 223 ~~p~~--~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 223 RIPRS--LSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred CCCCC--CCHHHHHHHHHHhccCHHHcCCC
Confidence 22222 22367899999999999999983
No 165
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=287.05 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=210.9
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccccc------ccHHHHHHHhccC-CCCCccceeeeeec
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAG------FGFASVIKTLSLA-QHPNIVPILGFSQA 130 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~------~~~~~e~~~l~~l-~h~niv~~~~~~~~ 130 (332)
.-+.|...+.||.|..+.|-++. ..+|+.+|+|++.......... ..-.+|+.+++++ .||||+.+.++++.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 34578889999999999998887 6789999999997544322211 1346788899988 69999999999999
Q ss_pred CCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 131 PGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 131 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
+...++|+|.|+.|.|.+++.+.-. +++....+|+.|+.+|+.|||.+ +||||||||+|||++++.++||+||
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~Vt----lSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKVT----LSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhee----ecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence 9999999999999999999976533 88999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCccc-----CCcccccCccccccc---CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhccccc
Q 020027 211 GLSFLAPEEK-----RGLAGYVDDDYWHEK---GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSE 282 (332)
Q Consensus 211 g~a~~~~~~~-----~~~~~~~~pe~~~~~---~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 282 (332)
|+|....... +||++|.|||.+.-. ....|+..+|+||.|+|+|.|+.|.+||..-..--.+.++.++.+
T Consensus 168 GFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky-- 245 (411)
T KOG0599|consen 168 GFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY-- 245 (411)
T ss_pred ceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc--
Confidence 9998877653 799999999977432 235689999999999999999999999987666566666666653
Q ss_pred ccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 283 LLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 283 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+..+...+-.....+++.+|++.||.+|.|++|.++
T Consensus 246 ----qF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 246 ----QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred ----ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 2334444455557789999999999999999999875
No 166
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.5e-41 Score=300.59 Aligned_cols=256 Identities=24% Similarity=0.370 Sum_probs=195.7
Q ss_pred CCCCCCceeeccCCeEEEEEEe-----CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec--CCc
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-----STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA--PGE 133 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~ 133 (332)
.+|...+.||+|+||.||++.. .++..||+|.+..... .....+.+|+.+++.++|||++++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH--HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 4678889999999999999974 3678999999865422 222357899999999999999999998744 346
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
.++++||+++++|.+++..... .+++..+..++.|++.||.|||++ +++||||||+||++++++.+||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~---~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRE---RLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCc---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccc
Confidence 7899999999999999965432 278999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCccc---------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcc-----
Q 020027 214 FLAPEEK---------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMR----- 279 (332)
Q Consensus 214 ~~~~~~~---------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~----- 279 (332)
....... .++..|++||.... ..++.++||||||+++|||++|..++........ ..+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 231 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTE---SKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFM-RMMGNDKQGQMI 231 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhcc---CCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhh-hhcccccccccc
Confidence 7654321 12335899998865 6788999999999999999998776543321111 1111100
Q ss_pred ---cccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 280 ---FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 280 ---~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
+.+.+......+.+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 232 VYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred hHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0011111112222223345788999999999999999999999999875
No 167
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.9e-41 Score=299.52 Aligned_cols=251 Identities=23% Similarity=0.294 Sum_probs=199.4
Q ss_pred cCCCCCCceeeccCCeEEEEEEe------CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCc
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGE 133 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 133 (332)
..+|...+.||+|+||.||++.. .++..+|+|.+.... ......+.+|+..++.++|+||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 34677889999999999999963 245689999876432 2223357899999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhcccCCC-----------CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC
Q 020027 134 RIIVSEFINMASLDFYLHENNDG-----------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 202 (332)
.++++||+++++|.+++...... ...+++..++.++.|++.|++|||+. +++||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC
Confidence 99999999999999998754311 12378899999999999999999998 99999999999999999
Q ss_pred CceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHH
Q 020027 203 FCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALP 273 (332)
Q Consensus 203 ~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~ 273 (332)
+.+||+|||++...... ..++..|++||.... ..++.++|||||||++|||++ |..||..........
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY---RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIE 235 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc---CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHH
Confidence 99999999998643221 123567999998865 678999999999999999998 889987654444333
Q ss_pred HhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
.+..+.. . ..+...+..+.+++.+||+.||++|||+.++++.|++
T Consensus 236 ~~~~~~~-------~--~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 236 CITQGRE-------L--ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHcCcc-------C--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 3322210 1 1111223467899999999999999999999999864
No 168
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.2e-41 Score=294.24 Aligned_cols=246 Identities=21% Similarity=0.231 Sum_probs=197.9
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc---ccccHHHHHHHhccCCCCCccceeeeeecCCceeE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN---AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 136 (332)
++|...+.||+|++|.||++. ..+++.+|+|.+........ ....+.+|+.++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 578899999999999999998 46789999999875432221 12357889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
++||+++++|.+++..... +++.....++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||+++..
T Consensus 82 v~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGA----LTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 9999999999999875432 78888999999999999999998 9999999999999999999999999998643
Q ss_pred Cc---------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCc
Q 020027 217 PE---------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287 (332)
Q Consensus 217 ~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (332)
.. ...++..|++||.... ..++.++||||||+++||+++|+.||................. .
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------~ 225 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISG---EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPT------N 225 (263)
T ss_pred cccccccccccCCCcCccccCcceecc---CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCC------C
Confidence 22 1235678999999876 5688999999999999999999999976533322222111110 1
Q ss_pred CCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 288 ~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
...+......+.+++.+||+.+|++|||+.++++.
T Consensus 226 --~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 --PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred --CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11112233467899999999999999999999863
No 169
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.7e-41 Score=294.65 Aligned_cols=250 Identities=23% Similarity=0.300 Sum_probs=190.2
Q ss_pred eeeccCCeEEEEEEeCCC---CEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCC
Q 020027 68 IIGQGRLGTVYAALLSTG---KLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMA 144 (332)
Q Consensus 68 ~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 144 (332)
.||+|+||.||+|...++ ..+++|.+..... ......+.+|+..++.++|||++++++.+......+++|||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 589999999999984333 3466666654322 122335789999999999999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC-------
Q 020027 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP------- 217 (332)
Q Consensus 145 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~------- 217 (332)
+|.+++.+........++.....++.|++.||.|||+. +++||||||+|||++.++.+|++|||++....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999976533333467777889999999999999998 99999999999999999999999999975421
Q ss_pred -cccCCcccccCcccccccC----CCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 218 -EEKRGLAGYVDDDYWHEKG----GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 218 -~~~~~~~~~~~pe~~~~~~----~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
....++..|++||.+.... ...++.++|||||||++|||++ |..||......+....+.........++....+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELP 237 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCC
Confidence 1224667899999875321 2346789999999999999997 566887655544444333322223333333322
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
. ...+.+++..|| .+|++|||++++++.|.
T Consensus 238 ~----~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 238 Y----SERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred C----cHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2 236678999999 68999999999999875
No 170
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=317.58 Aligned_cols=243 Identities=21% Similarity=0.294 Sum_probs=205.6
Q ss_pred CCCceeeccCCeEEEEEEeC--CCC--EEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 64 SHRRIIGQGRLGTVYAALLS--TGK--LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 64 ~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
...++||+|.||.|++|.|. +|+ .||||.++.+.... ...+|++|+..|.+|+|+|++++||...+ ....+|+|
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 34478999999999999964 343 79999998765433 45579999999999999999999999987 66789999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
+++.|+|.+.++... ...+.......++.|||.||.||-++ ++|||||..+|+|+....++||+|||+.+.++..
T Consensus 191 LaplGSLldrLrka~--~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKAK--KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hcccchHHHHHhhcc--ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 999999999998732 23377788889999999999999999 9999999999999999999999999999876644
Q ss_pred c---------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 220 K---------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 220 ~---------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
. .-...|.|||.+.. ..++.+||||+|||.+|||+| |..||.|.....+++.+.++ -.
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh---~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~---------er 333 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRH---RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAG---------ER 333 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhcc---ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccc---------cc
Confidence 3 23457999999987 789999999999999999999 88999998777776666543 34
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 020027 290 IPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATIL 325 (332)
Q Consensus 290 ~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L 325 (332)
.+.+..|...++++|..||+++|.+||||..|.+.+
T Consensus 334 LpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 334 LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 455566777999999999999999999999997443
No 171
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.8e-41 Score=302.67 Aligned_cols=253 Identities=21% Similarity=0.285 Sum_probs=195.2
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|...+.||+|+||.||+|+ ..+++.||+|.++.... ......+.+|+.+++.++||||+++++++..++..+++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 568889999999999999999 45788999999875432 2222346789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE- 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~- 218 (332)
|+++ +|.+++..... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 85 ~~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 85 YLDK-DLKQYMDDCGN---IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred CCCC-CHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 9975 78887765432 268888999999999999999998 999999999999999999999999999865322
Q ss_pred -----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------cccccc--
Q 020027 219 -----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-------RFSELL-- 284 (332)
Q Consensus 219 -----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~-- 284 (332)
...++..|++||.+... ..++.++|||||||++|||+||+.||.+....+....+... .+....
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGS--SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSN 235 (309)
T ss_pred ccccccccccccccCCHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcch
Confidence 12467889999987642 46789999999999999999999999865443332222110 000000
Q ss_pred ----C---CcCCC----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 285 ----D---PRLAI----PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 285 ----~---~~~~~----~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+ +.... ........++.+++.+|++.||.+|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 236 DEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0 00000 000112336779999999999999999999876
No 172
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.3e-41 Score=295.23 Aligned_cols=238 Identities=21% Similarity=0.353 Sum_probs=186.1
Q ss_pred ceeeccCCeEEEEEEeCC-------------CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCc
Q 020027 67 RIIGQGRLGTVYAALLST-------------GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGE 133 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 133 (332)
+.||+|+||.||+|+..+ ...|++|.+..... .....+.+|+..++.++||||+++++++..+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR--DISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh--hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 368999999999998432 22588888765432 223356888899999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCc-------eE
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFC-------AR 206 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~-------~k 206 (332)
.+++|||+++++|..++..... .+++..++.++.|+++||+|||++ +++||||||+|||++.++. ++
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRKSD---VLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CEEEEecccCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeE
Confidence 9999999999999998865322 378899999999999999999998 9999999999999986654 89
Q ss_pred EccCCccccCCc--ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHH-hCCCCCCchhHHHHHHHhhhcccccc
Q 020027 207 VCDYGLSFLAPE--EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL-SGRRCEEGLLVKWALPLIKEMRFSEL 283 (332)
Q Consensus 207 l~dfg~a~~~~~--~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~ 283 (332)
++|||++..... ...++..|+|||.+... ..++.++|||||||++|||+ +|..|+.+....+..... ...
T Consensus 153 l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~-~~~---- 225 (262)
T cd05077 153 LSDPGIPITVLSRQECVERIPWIAPECVEDS--KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFY-EGQ---- 225 (262)
T ss_pred eCCCCCCccccCcccccccccccChhhhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHH-hcC----
Confidence 999999865432 23567889999987632 56789999999999999998 488888765433322211 111
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 020027 284 LDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATIL 325 (332)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L 325 (332)
.....+ ...++.+++.+||+.||++||++.+|++.+
T Consensus 226 ----~~~~~~--~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 226 ----CMLVTP--SCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ----ccCCCC--ChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 111111 123678999999999999999999999876
No 173
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.9e-41 Score=293.39 Aligned_cols=246 Identities=20% Similarity=0.242 Sum_probs=203.6
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|+..+.||+|+||.||.++ ..+++.+++|.+............+.+|+.++++++|+||+++++++...+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 47888999999999999998 56789999999876554444445678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.+|++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQKG--QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 999999999976432 2378899999999999999999998 9999999999999999999999999998654322
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|.+||.... ...+.++|+||||+++|||++|..||.+....+....+..+.... ...
T Consensus 156 ~~~~~~~~~~~y~ape~~~~---~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 223 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQG---VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP---------VVS 223 (256)
T ss_pred ccccccCCCccccCHhhcCC---CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC---------Ccc
Confidence 347889999998875 567889999999999999999999998765554444333322111 111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
....++.+++.+||+.||++|||+.++++.
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 224 VYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 223467899999999999999999999875
No 174
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4.5e-41 Score=294.00 Aligned_cols=245 Identities=22% Similarity=0.315 Sum_probs=189.7
Q ss_pred ceeeccCCeEEEEEEeC----CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeee-cCCceeEEEecc
Q 020027 67 RIIGQGRLGTVYAALLS----TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQ-APGERIIVSEFI 141 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~ 141 (332)
+.||+|+||.||+|... ++..+|+|.+..... ......+.+|+.+++.++|||++++++++. .++..++++||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCC-HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 46899999999999842 345799998753221 122335678999999999999999999875 456688999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc---
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE--- 218 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~--- 218 (332)
++++|.+++...... .++...+.++.|++.|+.|||+. +++||||||+||++++++.+|++|||+++....
T Consensus 80 ~~~~L~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 80 KHGDLRNFIRSETHN---PTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCCHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 999999999754322 56777889999999999999998 999999999999999999999999999864322
Q ss_pred -------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhC-CCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 219 -------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSG-RRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 -------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
...++..|++||.+.. ..++.++|||||||++|||++| ..||...........+..+. ....
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 223 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR-------RLLQ 223 (262)
T ss_pred eeecccccCcCCccccChhHhcc---CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-------CCCC
Confidence 1134567999998876 6788999999999999999995 55666544333333222211 1111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
+...+..+.+++.+||+.+|++|||+.++++.|+++..
T Consensus 224 --~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 224 --PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred --CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 11123468899999999999999999999999998764
No 175
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-41 Score=303.72 Aligned_cols=256 Identities=23% Similarity=0.336 Sum_probs=204.3
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEe--------CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeee
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALL--------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFS 128 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 128 (332)
...++|...+.||+|+||.||++.. .....+|+|.++.... ......+..|+.+++.+ +||||+++++++
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 3456788899999999999999973 1345799998874422 22233577899999998 699999999999
Q ss_pred ecCCceeEEEeccCCCCHHHHhcccCC------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCC
Q 020027 129 QAPGERIIVSEFINMASLDFYLHENND------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASN 196 (332)
Q Consensus 129 ~~~~~~~lv~e~~~~~~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~N 196 (332)
...+..+++|||+++++|.+++..... ....+++.+++.++.|++.||.|||++ +++||||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 164 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARN 164 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccccee
Confidence 998999999999999999999975321 112478899999999999999999998 99999999999
Q ss_pred EEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchh
Q 020027 197 ILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLL 267 (332)
Q Consensus 197 ill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~ 267 (332)
|+++.++.+|++|||+++..... ..++..|++||.+.. ..++.++||||||+++||+++ |..||.+..
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD---RVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc---CCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999754321 123356999998865 678899999999999999999 888998766
Q ss_pred HHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 268 VKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
.......+..... ...+..+..++.+++.+||+.||++|||+.++++.|+++.
T Consensus 242 ~~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 242 VEELFKLLREGHR---------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred HHHHHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 6555554433211 1111223346779999999999999999999999998875
No 176
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-42 Score=314.81 Aligned_cols=241 Identities=21% Similarity=0.270 Sum_probs=206.2
Q ss_pred HHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccccc-ccHHHHHHHhccC-CCCCccceeeeeecCCc
Q 020027 57 DAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAG-FGFASVIKTLSLA-QHPNIVPILGFSQAPGE 133 (332)
Q Consensus 57 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~-~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 133 (332)
....++|...++||+|+||+|+.+. ..+++.+|||.++++....++. ...+.|..++... +||-++.++..+.+.++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 4456789999999999999999999 5688999999999887655443 3567888877766 59999999999999999
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
+++||||+.||++..+.+.. .+++.++..++..|+.||.|||++ +|++||||.+|||+|.+|.+||+|||++
T Consensus 444 l~fvmey~~Ggdm~~~~~~~-----~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlc 515 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIHTD-----VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLC 515 (694)
T ss_pred EEEEEEecCCCcEEEEEecc-----cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccc
Confidence 99999999999944333321 289999999999999999999999 9999999999999999999999999999
Q ss_pred ccCC------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCc
Q 020027 214 FLAP------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287 (332)
Q Consensus 214 ~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (332)
+..- ...+||+.|+|||.+.. ..|+.++|.|||||+||||+.|..||.|...++..+.+....
T Consensus 516 Ke~m~~g~~TsTfCGTpey~aPEil~e---~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~-------- 584 (694)
T KOG0694|consen 516 KEGMGQGDRTSTFCGTPEFLAPEVLTE---QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDE-------- 584 (694)
T ss_pred cccCCCCCccccccCChhhcChhhhcc---CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC--------
Confidence 7532 23479999999999988 789999999999999999999999999999999988887642
Q ss_pred CCCCCChHHHHHHHHHHHHcccCCCCCCCCH
Q 020027 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSI 318 (332)
Q Consensus 288 ~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~ 318 (332)
..++...+.+...+|++.+..||++|--+
T Consensus 585 --~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 --VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred --CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 22333445578899999999999999754
No 177
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.3e-42 Score=313.02 Aligned_cols=257 Identities=18% Similarity=0.231 Sum_probs=201.5
Q ss_pred HHHHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecC
Q 020027 54 TEIDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAP 131 (332)
Q Consensus 54 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 131 (332)
..+....++|...+.||+|+||.||+++ ..+++.+|+|.+....... .....+.+|+.+++.++||||+++++.+..+
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 4455567899999999999999999999 4578899999986432211 2222467889999999999999999999999
Q ss_pred CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCC
Q 020027 132 GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211 (332)
Q Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg 211 (332)
+..+++|||+++++|.+++.... ++...+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~~-----~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCC
Confidence 99999999999999999986532 67888889999999999999999 99999999999999999999999999
Q ss_pred ccccCCc-------ccCCcccccCcccccccC-CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccc
Q 020027 212 LSFLAPE-------EKRGLAGYVDDDYWHEKG-GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSEL 283 (332)
Q Consensus 212 ~a~~~~~-------~~~~~~~~~~pe~~~~~~-~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 283 (332)
++..... ...||..|+|||.+.... ...++.++|||||||++|||++|+.||.+.........+....
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~---- 263 (371)
T cd05622 188 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK---- 263 (371)
T ss_pred ceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC----
Confidence 9865432 235889999999987532 2347899999999999999999999998765544444433211
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 020027 284 LDPRLAIPCEIKPLVRLAKVALACVGNSRKN--RPSIVQVATI 324 (332)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~--RPs~~~i~~~ 324 (332)
..+..+........+.+++.+|++.++.+ ||++.++++.
T Consensus 264 --~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 264 --NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred --CcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 11112222223346778999999843332 7788888763
No 178
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.3e-41 Score=307.42 Aligned_cols=232 Identities=22% Similarity=0.299 Sum_probs=184.4
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccc-cccHHHHHHHhccC-CCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+++ ..+++.||+|.+++....... ...+..|+.++..+ +||||+++++++...+..+++|||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 469999999999999 457889999999865432222 22356788877766 899999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC------
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP------ 217 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~------ 217 (332)
++|..++..... +++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++...
T Consensus 81 ~~L~~~~~~~~~----l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~ 153 (329)
T cd05618 81 GDLMFHMQRQRK----LPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 153 (329)
T ss_pred CCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcc
Confidence 999988865432 78999999999999999999998 99999999999999999999999999986532
Q ss_pred cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh---------HHHHHHHhhhcccccccCCcC
Q 020027 218 EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL---------VKWALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 218 ~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 288 (332)
....|+..|+|||.+.. ..++.++|||||||++|||+||+.||.... .......+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--------~~~ 222 (329)
T cd05618 154 STFCGTPNYIAPEILRG---EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--------KQI 222 (329)
T ss_pred ccccCCccccCHHHHcC---CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--------CCC
Confidence 12357899999999876 678899999999999999999999995211 1111111111 112
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCH
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSI 318 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~ 318 (332)
..+.. ...++.+++.+||+.||++|||+
T Consensus 223 ~~p~~--~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 RIPRS--LSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCC--CCHHHHHHHHHHhcCCHHHcCCC
Confidence 22222 22367799999999999999984
No 179
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.3e-41 Score=301.45 Aligned_cols=252 Identities=23% Similarity=0.399 Sum_probs=199.1
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCC----EEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGK----LVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
.++|...+.||+|+||.||+|.. .+|+ .+|+|.+..... ......+.+|+.+++.++||||+++++++..+ ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 45678889999999999999984 4554 478888764432 12223578899999999999999999998764 46
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
++++||+++|+|.+++..... .+++..++.++.|++.||.|||++ +++||||||+||++++++.+||+|||+++
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKD---NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred eeeehhcCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccc
Confidence 789999999999999876432 278889999999999999999998 99999999999999999999999999987
Q ss_pred cCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccC
Q 020027 215 LAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 215 ~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
..... ..++..|++||.... ..++.++||||||+++||+++ |+.||.+.........+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------ 228 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHY---RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE------ 228 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhcc---CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC------
Confidence 54321 123567999998765 678899999999999999998 889997754444433332211
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccC
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGD 331 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~~ 331 (332)
.+ +.+..+...+.+++.+||..||++|||++++++.|+.+..+
T Consensus 229 -~~--~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 229 -RL--PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred -CC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11 11112234678999999999999999999999999987654
No 180
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5.4e-41 Score=294.79 Aligned_cols=251 Identities=22% Similarity=0.311 Sum_probs=189.5
Q ss_pred ceeeccCCeEEEEEEeC---CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAALLS---TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|... ....+++|.+.... .......+.+|+..++.++|+||+++++.+...+..+++|||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 35899999999999743 33468888775432 122223568899999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCC-CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc----
Q 020027 144 ASLDFYLHENNDG-ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE---- 218 (332)
Q Consensus 144 ~~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~---- 218 (332)
++|.+++...... ....++...+.++.|++.|++|||++ +++||||||+||++++++++|++|||++.....
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence 9999999765321 12246778889999999999999998 999999999999999999999999999864321
Q ss_pred ----ccCCcccccCccccccc----CCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 219 ----EKRGLAGYVDDDYWHEK----GGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 219 ----~~~~~~~~~~pe~~~~~----~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
...++..|++||.+... ....++.++|||||||++|||++ |..||......+...............+...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLD 236 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCccc
Confidence 11345679999987542 12467889999999999999999 7788876654444333322221122222211
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 290 IPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 290 ~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
......+.+++..|| .||++|||+++|++.|.
T Consensus 237 ----~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 237 ----LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ----ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 122235667888999 49999999999999874
No 181
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.9e-41 Score=299.96 Aligned_cols=244 Identities=22% Similarity=0.270 Sum_probs=197.8
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
..+|+..+.||+|+||.||+|. ..+++.||+|.+...... ....+.+|+.+++.++|+|++++++.+..++..+++|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 3578888999999999999998 568899999998754432 2234688999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++.... +++.+...++.|++.|+.|||+. +++|+||||+||+++.++.+||+|||++.....
T Consensus 97 e~~~~~~L~~~~~~~~-----~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 97 EYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (296)
T ss_pred cccCCCCHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence 9999999999986432 68889999999999999999998 999999999999999999999999998865432
Q ss_pred ------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 ------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
...++..|++||.+.. ..++.++|||||||++|||++|+.||............... .....+.
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-------~~~~~~~ 238 (296)
T cd06654 169 EQSKRSTMVGTPYWMAPEVVTR---KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-------GTPELQN 238 (296)
T ss_pred cccccCcccCCccccCHHHHcC---CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-------CCCCCCC
Confidence 1256788999998875 56789999999999999999999999765443322211111 1111111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+......+.+++.+||+.||++|||+.++++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 1222346779999999999999999999987
No 182
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.8e-41 Score=292.98 Aligned_cols=242 Identities=23% Similarity=0.290 Sum_probs=195.7
Q ss_pred ceeeccCCeEEEEEEeC--CC--CEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccC
Q 020027 67 RIIGQGRLGTVYAALLS--TG--KLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFIN 142 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 142 (332)
+.||+|++|.||+|... ++ ..||+|.+...... .....+.+|+..+++++||||+++++.+.. +..++++||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 36899999999999853 23 36999998766543 333467899999999999999999999988 88999999999
Q ss_pred CCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc----
Q 020027 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE---- 218 (332)
Q Consensus 143 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~---- 218 (332)
+++|.+++.+... ..+++.....++.|++.||.|||++ +++|+||+|+||+++.++.+|++|||++.....
T Consensus 79 ~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 79 LGSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CCcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 9999999976542 2478999999999999999999998 999999999999999999999999999875533
Q ss_pred -----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 -----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 -----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
...++..|++||+... ..++.++|||||||++|||+| |..||......+....+.... .... .
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------~~~~--~ 222 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRT---RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG------ERLE--R 222 (257)
T ss_pred eecccCCCCCceecCHHHhcc---cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC------CcCC--C
Confidence 1235678999998876 578899999999999999999 999997655444433332211 1111 1
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
+...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 223 PEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 1122347889999999999999999999999885
No 183
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.9e-42 Score=309.66 Aligned_cols=243 Identities=19% Similarity=0.206 Sum_probs=191.0
Q ss_pred CCCCCceeeccCCeEEEEEEe----CCCCEEEEEEeccCcccc--cccccHHHHHHHhccC-CCCCccceeeeeecCCce
Q 020027 62 GFSHRRIIGQGRLGTVYAALL----STGKLVAVKRIHPRLVLS--NAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGER 134 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 134 (332)
+|+..+.||+|+||.||+++. .+++.||+|.+....... .....+..|+.+++.+ +|+||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999874 468899999987543221 1122467889999999 599999999999999999
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
+++|||+++++|.+++..... +++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDN----FSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 999999999999999875432 78899999999999999999998 99999999999999999999999999986
Q ss_pred cCCc-------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH----HHHHHHhhhcccccc
Q 020027 215 LAPE-------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV----KWALPLIKEMRFSEL 283 (332)
Q Consensus 215 ~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~ 283 (332)
.... ...||..|+|||.+... ..++.++|||||||++|||+||+.||..... ......+..
T Consensus 154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~------ 225 (332)
T cd05614 154 EFLSEEKERTYSFCGTIEYMAPEIIRGK--GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK------ 225 (332)
T ss_pred cccccCCCccccccCCccccCHHHhcCC--CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc------
Confidence 5321 12578999999998652 3478899999999999999999999964321 111111111
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 284 LDPRLAIPCEIKPLVRLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
.++.+ + ......+.+++.+||+.||++|| +++++++
T Consensus 226 ~~~~~--~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 226 CDPPF--P--SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCCC--C--CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 11111 1 11223677999999999999999 6667764
No 184
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=9.3e-42 Score=307.93 Aligned_cols=239 Identities=23% Similarity=0.210 Sum_probs=189.0
Q ss_pred ceeeccCCeEEEEEEe-CCCCEEEEEEeccCccccc-ccccHHHHHH-HhccCCCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSN-AGFGFASVIK-TLSLAQHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|+. .+++.||+|.+........ ....+..|.. .++.++|+||+++++++...+..+++|||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4699999999999994 5778999999875432211 1223344443 46788999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-----
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----- 218 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~----- 218 (332)
++|.+++..... ++...+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~L~~~~~~~~~----~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~ 153 (325)
T cd05602 81 GELFYHLQRERC----FLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT 153 (325)
T ss_pred CcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCc
Confidence 999999875432 67788888999999999999998 999999999999999999999999999864321
Q ss_pred -ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 219 -EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 219 -~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
...|+..|+|||.+.. ..++.++|||||||++|||++|..||.+.........+..... ..+ ....
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~--------~~~--~~~~ 220 (325)
T cd05602 154 STFCGTPEYLAPEVLHK---QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL--------QLK--PNIT 220 (325)
T ss_pred ccccCCccccCHHHHcC---CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc--------CCC--CCCC
Confidence 2258899999999876 6788999999999999999999999987665554444433211 111 1122
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 020027 298 VRLAKVALACVGNSRKNRPSIVQVATIL 325 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~~i~~~L 325 (332)
..+.+++.+||+.||.+||++.+.+..+
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~i 248 (325)
T cd05602 221 NSARHLLEGLLQKDRTKRLGAKDDFMEI 248 (325)
T ss_pred HHHHHHHHHHcccCHHHCCCCCCCHHHH
Confidence 3677899999999999999987654443
No 185
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.8e-41 Score=293.35 Aligned_cols=245 Identities=20% Similarity=0.255 Sum_probs=199.1
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|+..+.||+|+||.||++. ..+++.+|+|.++.... ......+.+|+.+++.++|+|++++++.+..++..++++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 47778999999999999998 45789999999864432 22233567899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++..... ..++....+.++.|++.||.|||++ +++|+||||+||++++++.++++|||.+......
T Consensus 80 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 80 CDGGDLMQKIKLQRG--KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 999999998865332 2368889999999999999999998 9999999999999999999999999998654321
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|++||.+.. ..++.++|+||||+++|+|++|..||...........+..+.... . +.
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~---~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------~--~~ 222 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWEN---MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP-------L--PS 222 (255)
T ss_pred cccccccCCccccCHHHHcc---CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC-------C--Cc
Confidence 246778999999876 568899999999999999999999998765444433332222111 1 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
.....+.+++.+||+.||++|||+.++++.
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 223367799999999999999999999875
No 186
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=3.3e-41 Score=304.63 Aligned_cols=253 Identities=20% Similarity=0.213 Sum_probs=191.6
Q ss_pred CCceeecc--CCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEecc
Q 020027 65 HRRIIGQG--RLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 65 ~~~~lg~G--~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 141 (332)
..++||+| +|++||++. ..+|+.||+|.++...........+.+|+.+++.++||||+++++++..++..+++|||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35679999 788999998 568999999999765433333334678999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC----
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP---- 217 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~---- 217 (332)
++++|.+++..+... .+++..++.++.|++.||.|||++ +++||||||+||+++.++.++++||+......
T Consensus 82 ~~~~l~~~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHFMD--GMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999999754322 278999999999999999999998 99999999999999999999999998643221
Q ss_pred ---------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCc-
Q 020027 218 ---------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR- 287 (332)
Q Consensus 218 ---------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 287 (332)
....++..|++||.+... ...++.++|||||||++|||++|+.||..............+......+..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTT 235 (327)
T ss_pred cccccccccccccceecccChHHhhcc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccc
Confidence 112345679999998642 135789999999999999999999999764332222111111111110000
Q ss_pred -----------------------------------CCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 288 -----------------------------------LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 288 -----------------------------------~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...+........+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 236 IPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 000011112346789999999999999999999975
No 187
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.8e-41 Score=308.04 Aligned_cols=252 Identities=19% Similarity=0.219 Sum_probs=192.5
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC-----
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG----- 132 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 132 (332)
..++|...+.||+|+||.||++. ..+|+.||+|.+............+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 35789999999999999999998 467899999999755433333445778999999999999999999886443
Q ss_pred -ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCC
Q 020027 133 -ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211 (332)
Q Consensus 133 -~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg 211 (332)
..+++|||+++ ++...+.. .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 46899999975 56555532 167888899999999999999999 99999999999999999999999999
Q ss_pred ccccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc--------
Q 020027 212 LSFLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-------- 278 (332)
Q Consensus 212 ~a~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-------- 278 (332)
+++..... ..++..|+|||.+.. ..++.++|||||||++|||+||+.||.+......+..+...
T Consensus 169 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 245 (359)
T cd07876 169 LARTACTNFMMTPYVVTRYYRAPEVILG---MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEF 245 (359)
T ss_pred CccccccCccCCCCcccCCCCCchhccC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHH
Confidence 98754322 356888999999876 67889999999999999999999999865432221111000
Q ss_pred ------cccccc--CCcCC------------CC----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 279 ------RFSELL--DPRLA------------IP----CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 279 ------~~~~~~--~~~~~------------~~----~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...... .+... .+ ........+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 00000 00 00011246789999999999999999999986
No 188
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.7e-41 Score=296.14 Aligned_cols=249 Identities=23% Similarity=0.281 Sum_probs=195.4
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecC-----
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAP----- 131 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~----- 131 (332)
..+.|+..+.||+|+||.||+|. ..+++.||+|.+.... .....+.+|+.+++++ +|+|++++.+++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 45678888999999999999998 4578899999986442 2223568899999888 799999999998643
Q ss_pred -CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 132 -GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 132 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
+..+++|||+++++|.+++..... ..+++..+..++.|++.|++|||++ +++|+||+|+||++++++.++|+||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccC
Confidence 457899999999999999876432 2378999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCcc------cCCcccccCcccccccC--CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhccccc
Q 020027 211 GLSFLAPEE------KRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSE 282 (332)
Q Consensus 211 g~a~~~~~~------~~~~~~~~~pe~~~~~~--~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 282 (332)
|++...... ..++..|++||.+.... +..++.++|+|||||++|||++|+.||.................
T Consensus 156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~-- 233 (272)
T cd06637 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA-- 233 (272)
T ss_pred CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCC--
Confidence 998754321 24678899999886321 34678899999999999999999999976543332222211110
Q ss_pred ccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 283 LLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 283 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+. .........+.+++.+||+.||++|||+.++++
T Consensus 234 ---~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 234 ---PR---LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred ---CC---CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 01 111122346789999999999999999999875
No 189
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=6.6e-42 Score=313.13 Aligned_cols=246 Identities=19% Similarity=0.249 Sum_probs=195.0
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|+..+.||+|+||.||++. ..+++.||+|.++...... .....+.+|+.++..++|+||+++++.+...+..+++|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 468889999999999999998 4578999999997543222 22234678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... +++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMKKDT----LSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999875432 78899999999999999999998 999999999999999999999999998753311
Q ss_pred -----------------------------------------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHH
Q 020027 219 -----------------------------------------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL 257 (332)
Q Consensus 219 -----------------------------------------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~ 257 (332)
...||..|+|||.+.. ..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~---~~~~~~~DiwSlGvilyel~ 230 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ---TGYNKLCDWWSLGVIMYEML 230 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC---CCCCCcceeccccceeeecc
Confidence 1257899999999876 67889999999999999999
Q ss_pred hCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 020027 258 SGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPS---IVQVAT 323 (332)
Q Consensus 258 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs---~~~i~~ 323 (332)
||+.||.+.........+.... ..+..+.......++.+++.+++. ||.+|++ +.++++
T Consensus 231 tG~~Pf~~~~~~~~~~~i~~~~------~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 231 IGYPPFCSETPQETYRKVMNWK------ETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred cCCCCCCCCCHHHHHHHHHcCC------CceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 9999998776655544443211 111111111122356677777664 9999986 455543
No 190
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4e-41 Score=308.44 Aligned_cols=252 Identities=19% Similarity=0.213 Sum_probs=194.1
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC------
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP------ 131 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 131 (332)
..++|...+.||+|+||.||++. ..+++.||+|.+............+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 35789999999999999999998 45788999999976543333334578899999999999999999987543
Q ss_pred CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCC
Q 020027 132 GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211 (332)
Q Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg 211 (332)
...+++|||+++ ++.+++... +++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~~------~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQME------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHhc------CCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999965 676666431 67888999999999999999998 99999999999999999999999999
Q ss_pred ccccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcc------c
Q 020027 212 LSFLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMR------F 280 (332)
Q Consensus 212 ~a~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~------~ 280 (332)
+++..... ..++..|+|||.+.. ..++.++|||||||++|||++|+.||.+.........+.... +
T Consensus 172 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
T cd07875 172 LARTAGTSFMMTPYVVTRYYRAPEVILG---MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 248 (364)
T ss_pred CccccCCCCcccCCcccCCcCCHHHHhC---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 99765432 357889999999876 678899999999999999999999998654433322221100 0
Q ss_pred --------ccccC--C------------cCCCCC----ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 281 --------SELLD--P------------RLAIPC----EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 281 --------~~~~~--~------------~~~~~~----~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..... + ....+. +......+.+++.+|++.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 0 000000 0111236789999999999999999999986
No 191
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.6e-41 Score=296.21 Aligned_cols=238 Identities=24% Similarity=0.338 Sum_probs=185.3
Q ss_pred eeeccCCeEEEEEEeCC-------------------------CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCcc
Q 020027 68 IIGQGRLGTVYAALLST-------------------------GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV 122 (332)
Q Consensus 68 ~lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 122 (332)
.||+|+||.||+|.... ...|++|.+..... .....+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR--DIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH--HHHHHHHHHHHHHhcCCCCCee
Confidence 58999999999997421 13588998864432 2223567888899999999999
Q ss_pred ceeeeeecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC
Q 020027 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202 (332)
Q Consensus 123 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 202 (332)
++++++..++..+++|||+++++|..++..... .+++..++.++.|++.||.|||++ +++||||||+||+++..
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG---RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 999999999999999999999999999865322 278889999999999999999998 99999999999999754
Q ss_pred C-------ceEEccCCccccCC--cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHH-hCCCCCCchhHHHHH
Q 020027 203 F-------CARVCDYGLSFLAP--EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL-SGRRCEEGLLVKWAL 272 (332)
Q Consensus 203 ~-------~~kl~dfg~a~~~~--~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~-tg~~p~~~~~~~~~~ 272 (332)
+ .+|++|||++.... ....++..|++||.+... ..++.++|||||||++||++ +|..||.+.......
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 231 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGG--NSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE 231 (274)
T ss_pred CcccCccceeeecCCccccccccccccccCCcccCchhhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH
Confidence 3 47999999875432 223467789999987642 56789999999999999995 688898765443332
Q ss_pred HHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 273 PLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
..... ....+.+. ...+.+++.+||+.+|++|||+.++++.|+
T Consensus 232 ~~~~~---------~~~~~~~~--~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 232 RFYEK---------KHRLPEPS--CKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHh---------ccCCCCCC--ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 22111 01111111 126789999999999999999999999874
No 192
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3e-41 Score=304.29 Aligned_cols=237 Identities=19% Similarity=0.250 Sum_probs=191.8
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCC-CCCccceeeeeecCCceeEEE
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQ-HPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 138 (332)
+|+..+.||+|+||.||+|. ..+|+.||+|.+....... .....+..|..++..+. |++|+++++++...+..+++|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 36778899999999999998 5578999999987543222 22234567888888775 577888999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... +++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~~~~----l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQVGK----FKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999999876432 78999999999999999999998 999999999999999999999999999865321
Q ss_pred ------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 ------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
...|+..|+|||.... ..++.++|||||||++|||+||+.||.+.........+..... ..+.
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--------~~p~ 222 (323)
T cd05615 154 DGVTTRTFCGTPDYIAPEIIAY---QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--------SYPK 222 (323)
T ss_pred CCccccCccCCccccCHHHHcC---CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------CCCc
Confidence 2247899999999875 6788999999999999999999999988765555444433221 1111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSI 318 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~ 318 (332)
....++.+++.+||+.||.+|++.
T Consensus 223 --~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 223 --SLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred --cCCHHHHHHHHHHcccCHhhCCCC
Confidence 122367789999999999999985
No 193
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7e-41 Score=292.66 Aligned_cols=248 Identities=22% Similarity=0.382 Sum_probs=200.6
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
..++|...+.||+|+||.||++...++..+|+|.+..... ....+.+|+.+++.++|+|++++++.+.. ...+++|
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCChh---HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 4567888999999999999999977778899998875421 22357889999999999999999999877 7789999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... ..+++.+++.++.|++.|+.|||+. +++|+||+|+||+++.++.+|++|||.+.....
T Consensus 80 e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 80 EFMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred EeCCCCcHHHHHHhCCc--cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 99999999999976432 2378889999999999999999998 999999999999999999999999998865432
Q ss_pred cc-------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 219 EK-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ~~-------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
.. .++..|++||.... ..++.++|+|||||++||++| |+.||.+.........+.... ..
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~---------~~ 222 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINF---GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY---------RM 222 (260)
T ss_pred CCcccccCCcccccccCHhHhcc---CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC---------CC
Confidence 11 23456999998865 678889999999999999999 899998755444433332211 11
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
+.....+..+.+++.+||+.||++|||+.++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1112223468899999999999999999999999975
No 194
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=8.9e-42 Score=308.06 Aligned_cols=238 Identities=23% Similarity=0.212 Sum_probs=189.2
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHH-HhccCCCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIK-TLSLAQHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+++ ..+|+.+|+|.+....... .....+..|.. +++.++||||+++++.+..++..+++|||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 469999999999999 5689999999987543222 12223455544 46778999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-----
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----- 218 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~----- 218 (332)
++|..++..... +++..+..++.|++.||.|||+. +++||||||+|||+++++.+||+|||+++....
T Consensus 81 ~~L~~~l~~~~~----~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~ 153 (325)
T cd05604 81 GELFFHLQRERS----FPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTT 153 (325)
T ss_pred CCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCc
Confidence 999988865432 78999999999999999999998 999999999999999999999999999864321
Q ss_pred -ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 219 -EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 219 -~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
...|+..|+|||.+.. ..++.++|||||||++|||++|..||.+.........+..... ... ....
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~--------~~~--~~~~ 220 (325)
T cd05604 154 TTFCGTPEYLAPEVIRK---QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL--------VLR--PGAS 220 (325)
T ss_pred ccccCChhhCCHHHHcC---CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc--------cCC--CCCC
Confidence 1257889999999876 6788999999999999999999999987655554443333211 111 1122
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 298 VRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
..+.+++.+|++.||.+||++.+.++.
T Consensus 221 ~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 221 LTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred HHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 367789999999999999988644433
No 195
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-43 Score=288.60 Aligned_cols=248 Identities=18% Similarity=0.203 Sum_probs=209.9
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|+..+.||+|.|+.|+++. ..+|+.+|+|.+...........++.+|+.+.+.++||||+++.+.....+..++|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 5678888999999999999998 678999999999876665555557889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC---CCceEEccCCcccc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE---KFCARVCDYGLSFL 215 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~dfg~a~~ 215 (332)
|++.|++|..-+-.. ..+++..+-..+.||+++|.|+|.+ +|||||+||+|+++.. .--+|++|||+|..
T Consensus 90 e~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 999999996555432 2367777888999999999999999 9999999999999964 34589999999977
Q ss_pred CCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 216 APEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 216 ~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
.... ..||++|++||.... .+++..+||||.||+||-|+.|..||.+......+..+..+.+ ....
T Consensus 163 l~~g~~~~G~~GtP~fmaPEvvrk---dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~y------d~~~ 233 (355)
T KOG0033|consen 163 VNDGEAWHGFAGTPGYLSPEVLKK---DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAY------DYPS 233 (355)
T ss_pred eCCccccccccCCCcccCHHHhhc---CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcccc------CCCC
Confidence 6543 369999999999987 7899999999999999999999999999877777777776543 2233
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.......+..+++++++..||.+|.|+.|.++
T Consensus 234 ~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 234 PEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred cccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 333344457889999999999999999998764
No 196
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=9e-41 Score=290.22 Aligned_cols=242 Identities=27% Similarity=0.377 Sum_probs=196.4
Q ss_pred ceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCH
Q 020027 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASL 146 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 146 (332)
+.||+|+||.||++....++.||+|.+...... .....+.+|+.+++.++|+||+++++++...+..++++||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 368999999999999766999999988754432 2334578999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-------
Q 020027 147 DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE------- 219 (332)
Q Consensus 147 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~------- 219 (332)
.+++..... .+++..++.++.|++.|+.|||++ +++||||+|+||+++.++.+|++|||.+......
T Consensus 80 ~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 80 LTFLRKKKN---RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 999865322 378889999999999999999998 9999999999999999999999999998754321
Q ss_pred -cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 220 -KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 220 -~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
...+..|++||.... ..++.++|+||||+++|||+| |..||.+.........+... ...+.+...+
T Consensus 154 ~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 221 (251)
T cd05041 154 LKQIPIKWTAPEALNY---GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG---------YRMPAPQLCP 221 (251)
T ss_pred cCcceeccCChHhhcc---CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC---------CCCCCCccCC
Confidence 122456999998765 678899999999999999999 88888765544333333221 1111122334
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 298 VRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
.++.+++.+||+.+|++|||+.|+++.|..
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 578899999999999999999999999863
No 197
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.2e-41 Score=306.59 Aligned_cols=256 Identities=27% Similarity=0.395 Sum_probs=198.4
Q ss_pred hcCCCCCCceeeccCCeEEEEEEe------CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecC
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALL------STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAP 131 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 131 (332)
..++|...+.||+|+||.||+|.. .+++.||+|.++.... ......+.+|+.++..+ +|+||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-hHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 346789999999999999999972 3578999999975432 22223567899999999 689999999988654
Q ss_pred -CceeEEEeccCCCCHHHHhcccCCC------------------------------------------------------
Q 020027 132 -GERIIVSEFINMASLDFYLHENNDG------------------------------------------------------ 156 (332)
Q Consensus 132 -~~~~lv~e~~~~~~L~~~l~~~~~~------------------------------------------------------ 156 (332)
+..+++|||+++|+|.+++......
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 5678999999999999998653210
Q ss_pred ---------CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc--------
Q 020027 157 ---------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE-------- 219 (332)
Q Consensus 157 ---------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~-------- 219 (332)
...+++..+..++.|++.||+|||++ +++||||||+||+++.++++|++|||++......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 01367888899999999999999998 9999999999999999999999999998754221
Q ss_pred cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHH-HHHHhhhcccccccCCcCCCCCChHHH
Q 020027 220 KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKW-ALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 220 ~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
..++..|++||.... ..++.++||||||+++||+++ |..||.+..... ....+..+. ....+. ...
T Consensus 241 ~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~ 308 (343)
T cd05103 241 ARLPLKWMAPETIFD---RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-------RMRAPD--YTT 308 (343)
T ss_pred CCCCcceECcHHhcC---CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC-------CCCCCC--CCC
Confidence 123567999998765 678899999999999999997 888987643221 222222211 111111 112
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 298 VRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
.++.+++.+||+.||++|||+.|+++.|+.++.
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 367899999999999999999999999998875
No 198
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.2e-40 Score=290.45 Aligned_cols=244 Identities=26% Similarity=0.386 Sum_probs=200.7
Q ss_pred ceeeccCCeEEEEEEeC-C---CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccC
Q 020027 67 RIIGQGRLGTVYAALLS-T---GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFIN 142 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 142 (332)
+.||+|+||.||+|... . +..|++|.+....... ....+.+|+..++.++|+|++++++++...+..+++|||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 46899999999999954 3 7899999997654333 23467899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCC-----CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 143 MASLDFYLHENNDG-----ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 143 ~~~L~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
+++|.+++...... ...+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.+|++|||.+....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccccc
Confidence 99999999865211 23489999999999999999999998 99999999999999999999999999987654
Q ss_pred cc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcC
Q 020027 218 EE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 218 ~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (332)
.. ..++..|++||.... ..++.++||||+|+++|||++ |..||.+.........+.... .
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-------~- 225 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKD---GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY-------R- 225 (262)
T ss_pred cccccccccCCCcCccccCHHHhcc---CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------C-
Confidence 32 246778999998876 578899999999999999999 699998776555544444321 1
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
...+.....++.+++.+||+.||++|||+.++++.|+
T Consensus 226 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 -LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1111222347889999999999999999999999874
No 199
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.1e-41 Score=299.31 Aligned_cols=259 Identities=23% Similarity=0.341 Sum_probs=201.2
Q ss_pred CCCCCCceeeccCCeEEEEEEeC-----CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec--CCc
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLS-----TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA--PGE 133 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~ 133 (332)
..|...+.||+|+||.||++... +++.+|+|.+...... .....+.+|+..++.++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 45777889999999999999842 4789999998765432 233467899999999999999999999877 557
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
.+++|||+++++|.+++..... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++++|||.+
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRD---QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCcc---ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 8999999999999999976432 378999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCcc---------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHH------hhhc
Q 020027 214 FLAPEE---------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPL------IKEM 278 (332)
Q Consensus 214 ~~~~~~---------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~------~~~~ 278 (332)
...... ..++..|++||.+.. ..++.++|+||||+++|||+||..|+........... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~---~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRT---SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVT 233 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHcc---CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHH
Confidence 765521 123456899998866 5788999999999999999999998765322211000 0000
Q ss_pred ccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 279 RFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
.+.+.+......+.+..+..++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 234 RLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 001111111222222334457889999999999999999999999998763
No 200
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=8.2e-41 Score=295.89 Aligned_cols=255 Identities=18% Similarity=0.172 Sum_probs=194.0
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|...+.||+|++|.||+|.. .+++.||+|.++...........+.+|+.+++.++|||++++++++..++..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477788999999999999994 5789999999876543333334578899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc--
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-- 218 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~-- 218 (332)
++ ++|.+++..... ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++.....
T Consensus 81 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 688888865332 22478999999999999999999998 999999999999999999999999999864321
Q ss_pred ----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHh-hh------ccc-------
Q 020027 219 ----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI-KE------MRF------- 280 (332)
Q Consensus 219 ----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~-~~------~~~------- 280 (332)
...++..|+|||.+... ..++.++|||||||++|||+||+.||.+.......... .. ..+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGS--PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred ccccCCcccccccChHHhcCC--CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhH
Confidence 12457789999987642 45688999999999999999999999764332211111 00 000
Q ss_pred --ccccCC---cCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 281 --SELLDP---RLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 281 --~~~~~~---~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...... ............++.+++.+||+.||++|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000 0000000112336779999999999999999999875
No 201
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.1e-41 Score=297.24 Aligned_cols=248 Identities=23% Similarity=0.311 Sum_probs=191.9
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|+..+.||+|+||.||+|. ..+++.||+|.+..... ......+.+|+.++++++|||++++++.+..++..+++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 357788999999999999998 56889999999865422 2222357889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE- 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~- 218 (332)
|+++++|..+.. +++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 80 ~~~~~~l~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 80 FMDGGSLDVYRK--------IPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred cCCCCChHHhhc--------CCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 999999976531 67888889999999999999998 999999999999999999999999999865432
Q ss_pred ---ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 219 ---EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 219 ---~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
...++..|++||.... ..++.++|+||||+++|||++|+.||........... .........++.........
T Consensus 149 ~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 224 (279)
T cd06619 149 IAKTYVGTNAYMAPERISG---EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-PLQLLQCIVDEDPPVLPVGQ 224 (279)
T ss_pred cccCCCCChhhcCceeecC---CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-hHHHHHHHhccCCCCCCCCc
Confidence 2357889999999876 5688999999999999999999999865321110000 00000000000000000111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 296 PLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
...++.+++.+||+.||++||+++|+++.
T Consensus 225 ~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 225 FSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 22367899999999999999999998763
No 202
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=312.58 Aligned_cols=248 Identities=24% Similarity=0.299 Sum_probs=208.2
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccc-cHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~-~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
-|.+++.||.|+||.||-++ ..+.+.||||++.-......+.+ ++..|+..+..++|||+|.+.|++..+...|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 47788999999999999999 67889999999986655554443 68999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC--
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP-- 217 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~-- 217 (332)
||- |+..+++..+... +.+..+..|..|.+.||+|||++ +.+|||||..|||++++|.||++|||.|....
T Consensus 107 YCl-GSAsDlleVhkKp---lqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA 179 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHKKP---LQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA 179 (948)
T ss_pred HHh-ccHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence 994 6888888766543 77788889999999999999999 99999999999999999999999999997764
Q ss_pred cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 218 EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 218 ~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
++..||+.|||||++.....+.|+-++||||+|+...||...++|.........+.-+-.+. .|.+. ..+=.
T Consensus 180 nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe-----sPtLq---s~eWS 251 (948)
T KOG0577|consen 180 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-----SPTLQ---SNEWS 251 (948)
T ss_pred hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC-----CCCCC---CchhH
Confidence 34589999999999988777899999999999999999999999977655444433332211 12222 23344
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 298 VRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
+.+..++..|++.-|.+|||..+++..
T Consensus 252 ~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 252 DYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 577889999999999999999998763
No 203
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.8e-41 Score=307.62 Aligned_cols=254 Identities=17% Similarity=0.195 Sum_probs=193.7
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC-----
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP----- 131 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 131 (332)
...++|...+.||+|+||.||++. ..+++.||+|.+............+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 345789999999999999999998 45788999999876543333334567899999999999999999987543
Q ss_pred -CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 132 -GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 132 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
...+++|||+++ ++.+++... +++..+..++.|+++||.|||++ +++||||||+||+++.++.+||+||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~~------l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQME------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeC
Confidence 346899999975 666666421 68888999999999999999998 9999999999999999999999999
Q ss_pred CccccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------
Q 020027 211 GLSFLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM------- 278 (332)
Q Consensus 211 g~a~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~------- 278 (332)
|+++..... ..++..|+|||.+.. ..++.++|||||||++|||++|+.||.+.........+...
T Consensus 164 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (355)
T cd07874 164 GLARTAGTSFMMTPYVVTRYYRAPEVILG---MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_pred cccccCCCccccCCccccCCccCHHHHcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 999765432 357889999999875 57889999999999999999999999765332221111000
Q ss_pred -------ccccccC----------Cc----CCCC----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 279 -------RFSELLD----------PR----LAIP----CEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 279 -------~~~~~~~----------~~----~~~~----~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
......+ +. ...+ .+......+.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000000 00 0000 011123467899999999999999999999874
No 204
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.8e-41 Score=305.53 Aligned_cols=233 Identities=24% Similarity=0.256 Sum_probs=185.9
Q ss_pred ceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHH-HhccCCCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIK-TLSLAQHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|+. .+++.||+|.+....... .....+..|.. +++.++||||+++++.+...+..+++|||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999994 578899999987543222 12223445544 57888999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-----
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----- 218 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~----- 218 (332)
++|..++..... +++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~L~~~l~~~~~----~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (321)
T cd05603 81 GELFFHLQRERC----FLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT 153 (321)
T ss_pred CCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcc
Confidence 999888865332 67888889999999999999998 999999999999999999999999999865321
Q ss_pred -ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 219 -EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 219 -~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
...|+..|+|||.+.. ..++.++|||||||++|||++|..||.+.........+.... ...+ ....
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~--------~~~~--~~~~ 220 (321)
T cd05603 154 STFCGTPEYLAPEVLRK---EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP--------LQLP--GGKT 220 (321)
T ss_pred ccccCCcccCCHHHhcC---CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC--------CCCC--CCCC
Confidence 1247889999999865 678899999999999999999999998765544443333221 1111 1223
Q ss_pred HHHHHHHHHcccCCCCCCCCHH
Q 020027 298 VRLAKVALACVGNSRKNRPSIV 319 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~ 319 (332)
..+.+++.+||+.||.+||++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 221 VAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHHHccCCHhhcCCCC
Confidence 4678999999999999999864
No 205
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.7e-41 Score=303.93 Aligned_cols=257 Identities=23% Similarity=0.330 Sum_probs=204.3
Q ss_pred HHhcCCCCCCceeeccCCeEEEEEEeC--------CCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeee
Q 020027 57 DAATDGFSHRRIIGQGRLGTVYAALLS--------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGF 127 (332)
Q Consensus 57 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 127 (332)
+....+|...+.||+|+||.||++... .+..||+|.++.... ......+.+|+.+++++ +|+||++++++
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT-DKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC-HHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 344556888999999999999999731 223689998764321 22233578899999999 79999999999
Q ss_pred eecCCceeEEEeccCCCCHHHHhcccCC------------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCC
Q 020027 128 SQAPGERIIVSEFINMASLDFYLHENND------------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKAS 195 (332)
Q Consensus 128 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~ 195 (332)
+...+..++++||+++++|.+++..... ....+++.+++.++.|++.||.|||++ +++||||||+
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 163 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAAR 163 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccc
Confidence 9999999999999999999999875321 112378889999999999999999998 9999999999
Q ss_pred CEEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCch
Q 020027 196 NILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGL 266 (332)
Q Consensus 196 Nill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~ 266 (332)
||+++.++.+||+|||+++..... ..++..|++||.+.. ..++.++||||||+++|||++ |..||.+.
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~ 240 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD---RVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 240 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc---CCcCchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence 999999999999999998754321 123456999998876 678899999999999999999 88899876
Q ss_pred hHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 267 LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
........+..... .+.+.....++.+++.+||+.+|++|||+.|+++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 241 PVEELFKLLKEGHR---------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred CHHHHHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 65555544433211 1111223347889999999999999999999999999876
No 206
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1e-40 Score=290.68 Aligned_cols=245 Identities=22% Similarity=0.355 Sum_probs=199.3
Q ss_pred CCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
.+|+..+.||+|+||.||++...++..+|+|.+..... ....+.+|+++++.++|||++++++++......++++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM---SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC---CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 46777899999999999999976788999998864432 123578899999999999999999999998999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK 220 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~ 220 (332)
+++++|.+++..... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.+....+..
T Consensus 81 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 81 MEHGCLSDYLRAQRG---KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred CCCCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 999999999865432 278899999999999999999998 99999999999999999999999999987543221
Q ss_pred -------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 221 -------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 221 -------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
.++.+|++||.... ..++.++||||||+++||+++ |..||...........+..+. ....+.
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~---~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~----- 224 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSF---SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF--RLYKPR----- 224 (256)
T ss_pred ccccCCCccchhhcCHhHhcc---CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC--CCCCCC-----
Confidence 23457999998865 678899999999999999998 899997665444443333221 111111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
.....+.+++.+||+.+|++|||+.++++.|.
T Consensus 225 --~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 --LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred --CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 12247889999999999999999999999874
No 207
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=9.5e-41 Score=299.12 Aligned_cols=251 Identities=25% Similarity=0.314 Sum_probs=196.6
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|+..+.||+|+||.||++. ..++..+|+|.+..... ......+.+|+++++.++||||+++++.+..++..+++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 468889999999999999998 45788999998865422 1122347889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhc-CCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ-GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
|+++++|.+++..... +++..+..++.|+++||.|||+ . +++|+||||+||++++++.+|++|||++.....
T Consensus 80 y~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (308)
T cd06615 80 HMDGGSLDQVLKKAGR----IPENILGKISIAVLRGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 152 (308)
T ss_pred ccCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhhC---CEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence 9999999999976432 7888999999999999999997 4 899999999999999999999999999865432
Q ss_pred ----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccC---------
Q 020027 219 ----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLD--------- 285 (332)
Q Consensus 219 ----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 285 (332)
...++..|++||.+.. ..++.++|+||||+++|||+||+.||...........+... ......
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~---~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 228 (308)
T cd06615 153 SMANSFVGTRSYMSPERLQG---THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRP-VSEGEAKESHRPVSG 228 (308)
T ss_pred cccccCCCCcCccChhHhcC---CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCc-cccccccCCcccccC
Confidence 2356789999998765 56889999999999999999999998754332222111110 000000
Q ss_pred ---------------------CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 286 ---------------------PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 286 ---------------------~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
.....+.. .....+.+++.+||+.||++|||+.++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 229 HPPDSPRPMAIFELLDYIVNEPPPKLPSG-AFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCCCccchhhHHHHHHHHhcCCCccCcCc-ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 123468899999999999999999998864
No 208
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.1e-40 Score=293.35 Aligned_cols=254 Identities=19% Similarity=0.224 Sum_probs=196.2
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|+..+.||+|+||.||+|.. .+|+.||+|.+............+.+|+.+++.++|+|++++++++...+..+++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 4688889999999999999995 478999999986543222222346889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|++++++..++.... .+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEKNPR----GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 999988888765432 278999999999999999999998 9999999999999999999999999998765432
Q ss_pred ------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc--c------------
Q 020027 220 ------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM--R------------ 279 (332)
Q Consensus 220 ------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~------------ 279 (332)
..++..|++||..... ..++.++|+||||+++|||+||+.||.+....+....+... .
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 154 GDDYTDYVATRWYRAPELLVGD--TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred cccccCcccccccCCHHHHhCC--CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc
Confidence 2356789999987542 45788999999999999999999999765433322211110 0
Q ss_pred -c-ccccCCcCCCCCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 -F-SELLDPRLAIPCE-----IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 -~-~~~~~~~~~~~~~-----~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+ .....+......+ ......+.+++.+||+.||++|||+.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0 0000000000000 011346789999999999999999999875
No 209
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.4e-40 Score=289.58 Aligned_cols=245 Identities=23% Similarity=0.338 Sum_probs=199.2
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|+..+.||+|+||.||++. ..+++.+|+|.+............+.+|+.+++.++|||++++++.+...+..++++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 47888999999999999998 45888999999876544444445678999999999999999999999989999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC-CceEEccCCccccCCcc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK-FCARVCDYGLSFLAPEE 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~dfg~a~~~~~~ 219 (332)
+++++|.+++..... ..+++..+..++.|++.|+.|||++ +++|+||+|+||+++++ +.+|++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKRCN--SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 999999999976432 2378899999999999999999998 99999999999999854 56899999998765432
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|++||.... ...+.++||||||+++|+|++|+.||.+.........+....... . +.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~ 223 (256)
T cd08220 156 SKAYTVVGTPCYISPELCEG---KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP-------I--SD 223 (256)
T ss_pred ccccccccCCcccCchhccC---CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC-------C--CC
Confidence 246778999998875 567889999999999999999999997765443333222221111 1 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....+.+++.+||+.||++|||+.|+++
T Consensus 224 ~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 224 RYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 12336789999999999999999999986
No 210
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=7.1e-41 Score=294.19 Aligned_cols=253 Identities=24% Similarity=0.342 Sum_probs=200.8
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeCC----CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLST----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
..++|...+.||+|+||.||+|...+ ...||+|....... ......+.+|+.+++.++|||++++++++.. +..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 34568888999999999999998432 34789998865432 2223357889999999999999999998875 456
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
+++|||+++++|.+++..... .+++..++.++.|++.|+.|||+. +++|+||||+||+++.++.+|++|||+++
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~ 155 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKY---SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSR 155 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceee
Confidence 899999999999999975432 278999999999999999999998 99999999999999999999999999986
Q ss_pred cCCccc-------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCC
Q 020027 215 LAPEEK-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDP 286 (332)
Q Consensus 215 ~~~~~~-------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 286 (332)
...... .++..|++||.... ..++.++||||||+++||+++ |..||.+.........+..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~------- 225 (270)
T cd05056 156 YLEDESYYKASKGKLPIKWMAPESINF---RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE------- 225 (270)
T ss_pred ecccccceecCCCCccccccChhhhcc---CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-------
Confidence 543221 23457999998765 567899999999999999996 999998765444433332221
Q ss_pred cCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccccC
Q 020027 287 RLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVGD 331 (332)
Q Consensus 287 ~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~~ 331 (332)
.. +.+...+..+.+++.+||..+|++|||+.++++.|+++..+
T Consensus 226 ~~--~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 226 RL--PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred cC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11 11122334788999999999999999999999999987643
No 211
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.3e-40 Score=290.13 Aligned_cols=245 Identities=21% Similarity=0.278 Sum_probs=197.5
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec-CCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA-PGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e 139 (332)
+|+..+.||+|++|.||++. ..+++.+|+|.+............+.+|+.+++.++|+|++++++.+.. ++..++++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 47888999999999999999 4568899999987554333333457889999999999999999988764 456789999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE- 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~- 218 (332)
|+++++|.+++..... ..+++.++..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~l~~~l~~~~~--~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQKG--KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 9999999999976432 2378999999999999999999998 999999999999999999999999999865432
Q ss_pred -----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCC
Q 020027 219 -----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 219 -----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
...++..|++||.... ..++.++|+||||+++||+++|+.||.+.........+..+... . .+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~-----~----~~ 223 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSN---KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP-----P----MP 223 (257)
T ss_pred CCccccccCCcCccChhHhcC---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-----C----Cc
Confidence 1246788999998876 67788999999999999999999999765444333333232211 1 11
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 294 IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
......+.+++.+||+.||++|||+.++++
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 224 KDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 123347889999999999999999999875
No 212
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.6e-41 Score=294.82 Aligned_cols=249 Identities=23% Similarity=0.275 Sum_probs=196.2
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|...+.||+|+||.||+|. ..+++.||+|.++..... ....+.+|+.+++.++||||+++++.+...+..++++|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE--DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence 467788899999999999998 567899999998754321 22246789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE- 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~- 218 (332)
|+++++|.+++..... +++.+++.++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 87 ~~~~~~L~~~~~~~~~----~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 87 FCGGGSLQDIYHVTGP----LSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred ccCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 9999999999875432 78999999999999999999998 999999999999999999999999999864322
Q ss_pred -----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCC
Q 020027 219 -----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 219 -----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
...++..|+|||.........++.++|+|||||++|||++|..||.................. .+.... .
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~--~ 234 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQ---PPKLKD--K 234 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCC---CCcccc--c
Confidence 225788999999875333356789999999999999999999998654332222211111111 111110 1
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 294 IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
......+.+++.+||+.||++|||++++++
T Consensus 235 ~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 235 MKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 112235778999999999999999999875
No 213
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=9.5e-41 Score=295.64 Aligned_cols=257 Identities=22% Similarity=0.322 Sum_probs=195.4
Q ss_pred CCCCCceeeccCCeEEEEEEe-----CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC--Cce
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-----STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GER 134 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 134 (332)
.|...+.||+|+||.||.++. .++..||+|.++..... .....+.+|+.+++.++|||++++++++... ...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG-NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccH-HHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 468889999999999999973 46789999998754322 2233578999999999999999999998765 568
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
+++|||+++++|.+++.+... .+++..++.++.|++.||+|||++ +++||||||+||+++.++.++++|||+++
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNKN---KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEEEccCCCCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 899999999999999865432 378999999999999999999998 99999999999999999999999999986
Q ss_pred cCCc---------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhh----hcc--
Q 020027 215 LAPE---------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK----EMR-- 279 (332)
Q Consensus 215 ~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~----~~~-- 279 (332)
.... ...++..|++||.... ..++.++||||||+++||++|++.|+....... ..... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~---~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~-~~~~~~~~~~~~~~ 233 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQ---SKFYIASDVWSFGVTLYELLTYCDSESSPMTLF-LKMIGPTHGQMTVT 233 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhcc---CCCCccccchhhhhhhhhhhcCCCCCccccchh-hhhcccccccccHH
Confidence 5432 1234567999998765 568899999999999999999876543211000 00000 000
Q ss_pred -cccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 280 -FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 280 -~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
...........+.+......+.+++.+||+.||++|||+.++++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~ 284 (284)
T cd05079 234 RLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284 (284)
T ss_pred HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence 00000000111112223457889999999999999999999999998763
No 214
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-40 Score=290.51 Aligned_cols=244 Identities=25% Similarity=0.361 Sum_probs=197.5
Q ss_pred CCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
++|...+.||+|+||.||++.. +++.+|+|.++... ....+.+|+.+++.++|||++++++++..++ .+++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEEC
Confidence 4588889999999999999875 67889999986432 2235789999999999999999999986654 6899999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK 220 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~ 220 (332)
+++++|.+++..... ..+++..++.++.|++.|+.|||+. +++||||||+||+++.++.+|++|||++.......
T Consensus 80 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~ 154 (254)
T cd05083 80 MSKGNLVNFLRTRGR--ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV 154 (254)
T ss_pred CCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence 999999999976432 2378899999999999999999998 99999999999999999999999999987544322
Q ss_pred ---CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHH
Q 020027 221 ---RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKP 296 (332)
Q Consensus 221 ---~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (332)
..+..|++||.... ..++.++|+||||+++|||++ |+.||.+....+....+..+. ..+.+...
T Consensus 155 ~~~~~~~~y~~pe~~~~---~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~ 222 (254)
T cd05083 155 DNSKLPVKWTAPEALKH---KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY---------RMEPPEGC 222 (254)
T ss_pred CCCCCCceecCHHHhcc---CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC---------CCCCCCcC
Confidence 23457999998765 678899999999999999998 999997765544433333221 11111122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 297 LVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 297 ~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
+..+.+++.+||+.+|++|||+++++..|++
T Consensus 223 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 223 PADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 3477899999999999999999999998864
No 215
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.7e-41 Score=296.69 Aligned_cols=258 Identities=21% Similarity=0.233 Sum_probs=198.8
Q ss_pred HHHHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeee--
Q 020027 54 TEIDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQ-- 129 (332)
Q Consensus 54 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~-- 129 (332)
+.+....++|+..+.||+|+||.||++. ..+++.+|+|.+..... ....+.+|+.+++.+ +|+|++++++++.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 4455678899999999999999999998 45788999998764321 123467889999998 6999999999873
Q ss_pred ---cCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceE
Q 020027 130 ---APGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCAR 206 (332)
Q Consensus 130 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 206 (332)
.++..+++|||+++++|.+++.........+++..+..++.|++.|+.|||++ +++||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEE
Confidence 34568999999999999998764322223478888999999999999999998 999999999999999999999
Q ss_pred EccCCccccCCc------ccCCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc
Q 020027 207 VCDYGLSFLAPE------EKRGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM 278 (332)
Q Consensus 207 l~dfg~a~~~~~------~~~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~ 278 (332)
++|||++..... ...++..|++||.+... .+..++.++||||+||++|||++|+.||...............
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~ 244 (286)
T cd06638 165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN 244 (286)
T ss_pred EccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc
Confidence 999999865432 22578899999987532 1245788999999999999999999998765432222111111
Q ss_pred ccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 279 RFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
. .+.... +......+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~-----~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 245 P-----PPTLHQ--PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred C-----CCcccC--CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0 011111 11122368899999999999999999999874
No 216
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.9e-40 Score=288.68 Aligned_cols=251 Identities=25% Similarity=0.285 Sum_probs=201.1
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|...+.||+|+||.||+|.. .+++.+++|.+...... ....+.+|+.+++.++|||++++++.+...+..+++|
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 35788899999999999999994 57889999998754322 3345789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... .++...+..++.|++.|+.|||++ +++|+||+|+||++++++.+|++|||.+.....
T Consensus 80 e~~~~~~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 80 EYCGGGSLQDIYQVTRG---PLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred eCCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhh
Confidence 99999999999876422 278899999999999999999998 999999999999999999999999999865432
Q ss_pred c------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 E------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
. ..++..|++||.........++.++|+||||+++|||+||+.||.+..............+. .+. ...
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~---~~~--~~~ 228 (262)
T cd06613 154 TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFP---PPK--LKD 228 (262)
T ss_pred hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC---Ccc--ccc
Confidence 2 24677899999886532237788999999999999999999999875544333222221111 011 111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
......++.+++.+||+.||.+|||+++++.
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 229 KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2233456889999999999999999999875
No 217
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.5e-40 Score=295.47 Aligned_cols=249 Identities=23% Similarity=0.265 Sum_probs=198.1
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.+.|...+.||+|+||.||+|.. .+++.+++|.+.... ......+.+|+..++.++|+|++++++.+..++..+++|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 46788999999999999999994 568999999986542 222335688999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|..++.+... .+++..+..++.|++.|+.|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 89 e~~~~~~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 89 EFCPGGAVDAIMLELDR---GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred ecCCCCcHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence 99999999888765332 278999999999999999999998 999999999999999999999999998764322
Q ss_pred ------ccCCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 219 ------EKRGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
...++..|++||.+... ....++.++|+|||||++|||++|+.||...........+.... .+..
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-----~~~~-- 235 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE-----PPTL-- 235 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCC-----CccC--
Confidence 22467889999988532 12457889999999999999999999997654433322222211 1111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..+.....++.+++.+||+.||++||++.++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 236 SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111222336789999999999999999999975
No 218
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=9.5e-41 Score=295.88 Aligned_cols=247 Identities=22% Similarity=0.274 Sum_probs=194.7
Q ss_pred CCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccc-cccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
|...+.||+|+||+||++. ..+++.+|+|.+......... ...+.+|+.+++.++|+|++++.+.+..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 5667889999999999998 468899999998754332222 22467899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc--
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-- 218 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~-- 218 (332)
+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMGN--PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 999999988865332 2389999999999999999999998 999999999999999999999999999865432
Q ss_pred ---ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 219 ---EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 219 ---~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
...++..|++||.... ..++.++|+|||||++||++||..||.+.........+... .. ...... ...
T Consensus 157 ~~~~~~g~~~~~aPE~~~~---~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~-~~---~~~~~~--~~~ 227 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNN---QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR-VL---ETEEVY--SAK 227 (285)
T ss_pred cccCCCCCcCccChHHhcC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-hh---cccccc--Ccc
Confidence 2357889999999865 67889999999999999999999999865443322222111 10 001111 111
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 020027 296 PLVRLAKVALACVGNSRKNRPS-----IVQVAT 323 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RPs-----~~~i~~ 323 (332)
....+.+++.+||+.||++||| +.++++
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 228 FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred CCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 2236778999999999999999 556654
No 219
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.7e-40 Score=290.84 Aligned_cols=245 Identities=23% Similarity=0.313 Sum_probs=195.6
Q ss_pred CCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccc----cccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 62 GFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLS----NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
+|...+.||+|+||.||+|...+++.+|+|.+....... .....+.+|+..++.++|+||+++++++...+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 467788999999999999998889999999987543221 1122477899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
+||+++++|.+++.+... +++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNRFGP----LPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 999999999999976432 68888999999999999999998 99999999999999999999999999876432
Q ss_pred c------------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccC
Q 020027 218 E------------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 218 ~------------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
. ...++..|++||.... ..++.++|+||||+++||+++|..||...........+.... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~ 227 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINE---SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHR---GLM 227 (265)
T ss_pred hccccccccccccccCCCccccChhhhcC---CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhcc---CCC
Confidence 1 1246778999998876 567899999999999999999999997643222211111110 001
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.. +......+.+++.+||+.+|++|||+.++++
T Consensus 228 ~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 PRL----PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCC----CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111 1122346789999999999999999999875
No 220
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.3e-41 Score=328.14 Aligned_cols=256 Identities=21% Similarity=0.235 Sum_probs=200.0
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||+|. ..+|+.||+|+++....... ....+.+|+.+++.++||||+++++++..++..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 478889999999999999999 45789999999975433221 2235789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCC-------CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCC
Q 020027 139 EFINMASLDFYLHENNDG-------ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg 211 (332)
||+++++|.+++...... ....++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 999999999998642110 12256778889999999999999998 99999999999999999999999999
Q ss_pred ccccCC------------------------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh
Q 020027 212 LSFLAP------------------------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL 267 (332)
Q Consensus 212 ~a~~~~------------------------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~ 267 (332)
++.... ....||+.|+|||.... ..++.++|||||||++|||+||+.||.+..
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g---~~~S~kSDIWSLGVILyELLTG~~PF~~~~ 235 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG---VPASESTDIYALGVILYQMLTLSFPYRRKK 235 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC---CCCCcHhHHHHHHHHHHHHHHCCCCCCCcc
Confidence 986541 01247899999998876 678999999999999999999999997643
Q ss_pred HHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhccc
Q 020027 268 VKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRP-SIVQVATILNNLV 329 (332)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RP-s~~~i~~~L~~~~ 329 (332)
....... .. ..++. ........+..+.+++.+||+.||++|| +++++.+.|+..+
T Consensus 236 ~~ki~~~---~~---i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 236 GRKISYR---DV---ILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred hhhhhhh---hh---ccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 3222110 00 01111 0011112233677899999999999995 6777888877654
No 221
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.1e-40 Score=290.44 Aligned_cols=245 Identities=20% Similarity=0.251 Sum_probs=199.9
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|+..+.||+|+||.+|.+. ..+|+.||+|.+............+.+|+..++.++||||+++++++...+..++++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 47888999999999999998 45789999999875433333334678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++..... ..+++.+++.++.|++.|+.|||++ +++|+||+|+||+++.++.++++|||++......
T Consensus 81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQRG--VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 999999998875432 2368899999999999999999998 9999999999999999999999999998755432
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|++||.... ...+.++|+|||||+++|++||+.||......+....+..+... +.+.
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~---~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 223 (256)
T cd08218 156 ELARTCIGTPYYLSPEICEN---RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYP---------PVSS 223 (256)
T ss_pred hhhhhccCCccccCHHHhCC---CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCC---------CCcc
Confidence 246778999998865 56788999999999999999999999765444433333222111 1112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
....++.+++.+||+.+|++||++.++++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 22346889999999999999999999986
No 222
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.4e-40 Score=289.60 Aligned_cols=244 Identities=25% Similarity=0.325 Sum_probs=199.0
Q ss_pred cCCCCCCceeeccCCeEEEEEEeC-CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|+..+.||+|+||.||+|... +++.+++|.+..... ...+.+|+..++.++|+|++++++.+..+...++++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 367889999999999999999954 588999999865432 346789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||++.....
T Consensus 78 e~~~~~~L~~~l~~~~~---~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 78 EYCGAGSVSDIMKITNK---TLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred ecCCCCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 99999999999865332 378999999999999999999998 999999999999999999999999999876443
Q ss_pred c------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 E------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
. ..++..|++||.... ..++.++||||||+++|||++|+.||...........+.... .+... .
T Consensus 152 ~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~--~ 221 (256)
T cd06612 152 TMAKRNTVIGTPFWMAPEVIQE---IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKP-----PPTLS--D 221 (256)
T ss_pred CccccccccCCccccCHHHHhc---CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCC-----CCCCC--c
Confidence 2 236778999998865 578899999999999999999999997654433222211110 01111 1
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+......+.+++.+||+.||++|||+.|+++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 222 PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 1122346889999999999999999999875
No 223
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.3e-40 Score=290.25 Aligned_cols=242 Identities=24% Similarity=0.330 Sum_probs=194.9
Q ss_pred CCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCccccc-------ccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 63 FSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSN-------AGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
|...+.||+|+||.||+|.. .+++.+|+|.+........ ....+.+|+.+++.++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 56778999999999999984 5788999998875543222 112467899999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
++++||+++++|.+++..... +++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||.++
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~----l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYGA----FEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred EEEEEecCCCCHHHHHHhccC----ccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999976432 78888999999999999999998 99999999999999999999999999886
Q ss_pred cCCc------------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhccccc
Q 020027 215 LAPE------------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSE 282 (332)
Q Consensus 215 ~~~~------------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 282 (332)
.... ...++..|++||.... ..++.++|+|||||++|||++|+.||.+.........+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---- 227 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ---TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN---- 227 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhcc---CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc----
Confidence 5431 1135678999998875 56788999999999999999999999875433222221111
Q ss_pred ccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 283 LLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 283 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..+.. +......+.+++.+||+.||++||++.++++
T Consensus 228 -~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 -ASPEI----PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -CCCcC----CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11111 1122346789999999999999999999875
No 224
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.2e-40 Score=294.75 Aligned_cols=246 Identities=23% Similarity=0.250 Sum_probs=195.1
Q ss_pred CCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEecc
Q 020027 63 FSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 141 (332)
|+..+.||+|+||.||+|.. .++..+++|.+..... .....+.+|+.+++.++|+|++++++.+..++..++++||+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH--HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 56678899999999999994 5678899998864432 22235688999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc---
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE--- 218 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~--- 218 (332)
++++|..++..... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+|++|||++.....
T Consensus 85 ~~~~l~~~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 85 AGGAVDAVMLELER---PLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred CCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence 99999988764322 378999999999999999999998 999999999999999999999999999865422
Q ss_pred ---ccCCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCC
Q 020027 219 ---EKRGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 219 ---~~~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
...++..|++||.+... .+..++.++|+|||||++|||++|+.||...........+..... +... .+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~--~~ 231 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP-----PTLA--QP 231 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC-----CCCC--Cc
Confidence 23578899999987432 235678899999999999999999999987544333222222111 1111 11
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 294 IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....++.+++.+||+.||++|||+.++++
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 232 SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 122347889999999999999999999875
No 225
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.2e-41 Score=294.55 Aligned_cols=239 Identities=24% Similarity=0.361 Sum_probs=186.1
Q ss_pred ceeeccCCeEEEEEEeC-C-------CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 67 RIIGQGRLGTVYAALLS-T-------GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~-~-------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
+.||+|+||.||+|... + ...+|+|.+.... ......+.+|+.+++.++|||++++++++..++..+++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 36899999999999842 2 2348888875432 122235688899999999999999999999988999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCc--------eEEccC
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFC--------ARVCDY 210 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~--------~kl~df 210 (332)
||+++++|..++..... .+++..++.++.|++.|++|||+. +++||||||+||+++.++. ++++||
T Consensus 79 e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 79 EYVKFGSLDTYLKKNKN---LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred ecCCCCcHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccc
Confidence 99999999999976432 378899999999999999999998 9999999999999987665 699999
Q ss_pred CccccCCc--ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCC-CCCCchhHHHHHHHhhhcccccccCCc
Q 020027 211 GLSFLAPE--EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGR-RCEEGLLVKWALPLIKEMRFSELLDPR 287 (332)
Q Consensus 211 g~a~~~~~--~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (332)
|.+..... ...++..|++||.+... ..++.++||||||+++||+++|. .|+.............. .
T Consensus 153 g~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~---------~ 221 (258)
T cd05078 153 GISITVLPKEILLERIPWVPPECIENP--QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED---------R 221 (258)
T ss_pred ccccccCCchhccccCCccCchhccCC--CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc---------c
Confidence 99865443 23577889999998752 45788999999999999999985 55554433322221111 1
Q ss_pred CCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 288 ~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
...+.. ...++.+++.+||+.||++|||++++++.|+
T Consensus 222 ~~~~~~--~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 HQLPAP--KWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ccCCCC--CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 111111 1236789999999999999999999999874
No 226
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.2e-40 Score=288.91 Aligned_cols=238 Identities=24% Similarity=0.373 Sum_probs=186.9
Q ss_pred ceeeccCCeEEEEEEeCC-C----------CEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 67 RIIGQGRLGTVYAALLST-G----------KLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
+.||+|+||.||+|...+ + ..+++|.+...... ...+.+|+.+++.++|||++++++++.. +..+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 368999999999999543 3 25778876544321 3467899999999999999999999987 7789
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC-------ceEEc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF-------CARVC 208 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-------~~kl~ 208 (332)
+++||+++++|.+++..... .+++..++.++.|++.||.|||++ +++||||||+||+++.++ .+|++
T Consensus 77 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREKN---NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred EEEEcCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeC
Confidence 99999999999999976542 378899999999999999999998 999999999999999887 79999
Q ss_pred cCCccccCCc--ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccC
Q 020027 209 DYGLSFLAPE--EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 209 dfg~a~~~~~--~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
|||++..... ...++..|++||++.... ..++.++||||||+++||+++ |..|+...............
T Consensus 151 Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~------- 222 (259)
T cd05037 151 DPGIPITVLSREERVERIPWIAPECIRNGQ-ASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ------- 222 (259)
T ss_pred CCCcccccccccccccCCCccChhhhcCCC-CCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC-------
Confidence 9999876543 234667899999986521 367899999999999999999 56777654322221111110
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
.....+.. ..+.+++.+||..+|++|||+.++++.|+
T Consensus 223 ~~~~~~~~----~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 223 HRLPMPDC----AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CCCCCCCc----hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 01111111 47889999999999999999999999874
No 227
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.7e-40 Score=290.31 Aligned_cols=252 Identities=21% Similarity=0.253 Sum_probs=198.0
Q ss_pred CCCCCceeeccCCeEEEEEEeC--CCCEEEEEEeccCcccc--------cccccHHHHHHHhcc-CCCCCccceeeeeec
Q 020027 62 GFSHRRIIGQGRLGTVYAALLS--TGKLVAVKRIHPRLVLS--------NAGFGFASVIKTLSL-AQHPNIVPILGFSQA 130 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~--------~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~ 130 (332)
+|+..+.||+|+||.||+|... +++.+|+|.+....... .....+.+|+.++.+ ++|+|++++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 4778899999999999999954 47899999886433211 111235677777764 799999999999999
Q ss_pred CCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhc-CCCCCeeecCCCCCCEEeCCCCceEEcc
Q 020027 131 PGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ-GVAPNIIHGCIKASNILLNEKFCARVCD 209 (332)
Q Consensus 131 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~d 209 (332)
.+..+++|||+++++|.+++.........+++..++.++.|++.|+.|||+ . +++|+||+|+||+++.++.+|++|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 999999999999999999885432223348889999999999999999996 5 899999999999999999999999
Q ss_pred CCccccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhccccccc
Q 020027 210 YGLSFLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELL 284 (332)
Q Consensus 210 fg~a~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 284 (332)
||.+...... ..++..|++||.... ..++.++|+||||+++|||++|+.||...........+........
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~---~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~- 233 (269)
T cd08528 158 FGLAKQKQPESKLTSVVGTILYSCPEIVKN---EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL- 233 (269)
T ss_pred ccceeecccccccccccCcccCcChhhhcC---CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC-
Confidence 9998764432 246788999998875 6689999999999999999999999976544333333322211110
Q ss_pred CCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 285 DPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
........+.+++.+||+.||++|||+.|+.++++.
T Consensus 234 -------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 234 -------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred -------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 011123478899999999999999999999998863
No 228
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=8.6e-41 Score=303.86 Aligned_cols=254 Identities=20% Similarity=0.224 Sum_probs=193.6
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC------
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP------ 131 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 131 (332)
..++|...+.||+|+||.||+|. ..+++.||+|.+............+.+|+.+++.++|+||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 45789999999999999999998 56888999999875543333333467899999999999999999987533
Q ss_pred CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCC
Q 020027 132 GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211 (332)
Q Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg 211 (332)
...++++|++ +++|.+++... .+++..+..++.|++.||.|||++ +|+||||||+||++++++.+||+|||
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKCQ-----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCc
Confidence 3468999988 78898887532 278999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCcc---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc---c------
Q 020027 212 LSFLAPEE---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM---R------ 279 (332)
Q Consensus 212 ~a~~~~~~---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~---~------ 279 (332)
+++..... ..++..|+|||.+... ..++.++|||||||++|||++|+.||.+.........+... .
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07878 164 LARQADDEMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLK 241 (343)
T ss_pred cceecCCCcCCccccccccCchHhcCC--ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 98765443 2578899999988652 46789999999999999999999999765433222211110 0
Q ss_pred ------cccccCCcCCCCCC------hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 ------FSELLDPRLAIPCE------IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 ------~~~~~~~~~~~~~~------~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...........+.. ......+.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 242 KISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred hcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000000000 001124679999999999999999999985
No 229
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.4e-41 Score=295.02 Aligned_cols=249 Identities=29% Similarity=0.365 Sum_probs=195.5
Q ss_pred CCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEecc
Q 020027 63 FSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 141 (332)
|+..+.||+|+||+||+++. .+++.+|+|.+..............+|+..++.++||||+++++++...+..+++||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 45678999999999999994 56678999999876544443333456899999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC----
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP---- 217 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~---- 217 (332)
++++|.+++..... +++..++.++.|+++||.+||+. +++|+||||+||++++++.++|+|||.+....
T Consensus 81 ~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQKNKP----LSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp TTEBHHHHHHHHSS----BBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred cccccccccccccc----ccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 99999999983332 78999999999999999999999 99999999999999999999999999986421
Q ss_pred --cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 218 --EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 218 --~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
....++..|.|||.... +...+.++|+||+|+++|+|++|..||...........+............ .....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 228 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQ--GKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS---QQSRE 228 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTT--TSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT---TSHTT
T ss_pred ccccccccccccccccccc--cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc---cccch
Confidence 12357889999999871 267899999999999999999999999876222222222111100000000 00001
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 296 PLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
....+.+++.+||+.||++|||+.++++
T Consensus 229 ~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 229 KSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp SHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1147889999999999999999999875
No 230
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.7e-40 Score=296.44 Aligned_cols=254 Identities=21% Similarity=0.277 Sum_probs=196.5
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|...+.||+|+||.||+|+. .+++.||+|.++..... .....+.+|+..++.++||||+++++++..++..+++|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 45788999999999999999984 57889999998754322 22234678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||++ ++|.+++..... .+++..+..++.|++.||.|||+. +++|+||||+||++++++.+|++|||++.....
T Consensus 84 e~~~-~~l~~~l~~~~~---~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 156 (301)
T cd07873 84 EYLD-KDLKQYLDDCGN---SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 156 (301)
T ss_pred eccc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence 9997 588888865432 278889999999999999999998 999999999999999999999999999865332
Q ss_pred ------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------ccccccC
Q 020027 219 ------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-------RFSELLD 285 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~ 285 (332)
...++..|++||.+... ..++.++|||||||++|||+||+.||.+....+....+... .+....+
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T cd07873 157 PTKTYSNEVVTLWYRPPDILLGS--TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 234 (301)
T ss_pred CCCcccccceeecccCcHHHhCC--CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhc
Confidence 12457789999987642 45788999999999999999999999876544333222110 0100000
Q ss_pred ---------CcCCCC----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 286 ---------PRLAIP----CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 286 ---------~~~~~~----~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+..... ........+.+++.+|++.||.+|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000 00112336779999999999999999999986
No 231
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.1e-40 Score=295.29 Aligned_cols=244 Identities=23% Similarity=0.286 Sum_probs=198.3
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
..+|+..+.||.|+||.||+|. ..+++.|++|.+..... .....+.+|+..++.++|||++++++++...+..++++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 3468888999999999999998 56889999999865432 22235688999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|..++... .+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 96 e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 96 EYLAGGSLTDVVTET-----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred EecCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 999999999988643 278999999999999999999999 999999999999999999999999998765432
Q ss_pred c------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 E------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
. ..++..|++||.... ..++.++|+|||||++||+++|+.||.+.........+..... +.+..
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~-----~~~~~-- 237 (296)
T cd06655 168 EQSKRSTMVGTPYWMAPEVVTR---KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-----PELQN-- 237 (296)
T ss_pred ccccCCCcCCCccccCcchhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-----cccCC--
Confidence 2 246778999998875 5678999999999999999999999987654433322222111 11111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+......+.+++.+||..||++|||+.+++.
T Consensus 238 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 238 PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred cccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 1122336778999999999999999999875
No 232
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=6.6e-41 Score=296.67 Aligned_cols=254 Identities=22% Similarity=0.251 Sum_probs=195.5
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|+..+.||+|+||.||+|.. .+++.||+|.+............+.+|+.+++.++||||+++++++..++..++++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 4688889999999999999995 468999999987544333233357889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|++++++..+..... .+++..++.++.|++.||+|||+. +++|+||+|+||++++++.++++|||++......
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKYPN----GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 999999988775432 278999999999999999999998 9999999999999999999999999998754322
Q ss_pred ------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh--cccc----------
Q 020027 220 ------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE--MRFS---------- 281 (332)
Q Consensus 220 ------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~--~~~~---------- 281 (332)
..++..|++||..... ..++.++||||||+++|||++|++||.+....+....+.. ..+.
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 154 GEVYTDYVATRWYRAPELLVGD--TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred ccccCcccceeeccCcHHhccc--cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence 2356789999987642 4567899999999999999999999865432221111110 0000
Q ss_pred ----cccCCcCCCCC-----ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 282 ----ELLDPRLAIPC-----EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 282 ----~~~~~~~~~~~-----~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
....+...... .......+.+++.+||+.||++|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000000 1122346889999999999999999999875
No 233
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.2e-40 Score=301.43 Aligned_cols=252 Identities=18% Similarity=0.193 Sum_probs=194.1
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||+++ ..+++.||+|.+.+..... .....+.+|+.++..++|+||+++++++..++..+++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 468889999999999999999 4578999999987532222 22234678899999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... .+++..+..++.|++.||+|||++ +++||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSKFED---RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 99999999999975332 278889999999999999999999 999999999999999999999999999865322
Q ss_pred c-------cCCcccccCcccccccC--CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 219 E-------KRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 219 ~-------~~~~~~~~~pe~~~~~~--~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
. ..|+..|+|||.+.... ...++.++|||||||++|||++|+.||.+....+....+..... ...
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~------~~~ 228 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE------HFQ 228 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCC------ccc
Confidence 1 24789999999986421 24578899999999999999999999987654444333322110 111
Q ss_pred CCC-ChHHHHHHHHHHHHcccC--CCCCCCCHHHHHHH
Q 020027 290 IPC-EIKPLVRLAKVALACVGN--SRKNRPSIVQVATI 324 (332)
Q Consensus 290 ~~~-~~~~~~~l~~l~~~c~~~--dp~~RPs~~~i~~~ 324 (332)
.+. .......+.+++.+|+.. ++..||++.++++.
T Consensus 229 ~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 111 111233567788887654 34447898888753
No 234
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=9.1e-41 Score=294.63 Aligned_cols=241 Identities=23% Similarity=0.288 Sum_probs=195.4
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
.|+..+.||+|+||.||+|. ..+++.||+|.+...... .....+.+|+.+++.++||||+++++++..++..++++||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch-HHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 35667789999999999998 457889999988644322 2223578999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++... .+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.++++|||++......
T Consensus 84 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 84 LGGGSALDLLKPG-----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred cCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 9999999988642 278889999999999999999998 9999999999999999999999999998654432
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|++||.+.. ..++.++|+|||||++||++||+.|+...........+.... .+. ...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-----~~~----~~~ 223 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQ---SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS-----PPT----LEG 223 (277)
T ss_pred hhhhcccCcccccCHHHhCc---CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC-----CCC----CCc
Confidence 246778999999876 568899999999999999999999987654433322221111 111 111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....+.+++.+||+.+|++|||+.++++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 23346789999999999999999999987
No 235
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.5e-40 Score=291.03 Aligned_cols=251 Identities=24% Similarity=0.336 Sum_probs=196.0
Q ss_pred CCCCceeeccCCeEEEEEEe----CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC------
Q 020027 63 FSHRRIIGQGRLGTVYAALL----STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG------ 132 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 132 (332)
|...+.||+|+||.||+|.. .+++.||+|.+............+.+|+++++.++|||++++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 55678899999999999984 24689999998765433333345788999999999999999999875432
Q ss_pred ceeEEEeccCCCCHHHHhcccC--CCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 133 ERIIVSEFINMASLDFYLHENN--DGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
..++++||+++++|..++.... .....+++...+.++.|++.|++|||+. +++||||||+||++++++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2478899999999988875321 1122378889999999999999999998 9999999999999999999999999
Q ss_pred CccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccc
Q 020027 211 GLSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFS 281 (332)
Q Consensus 211 g~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 281 (332)
|+++..... ..++..|++||.+.. ..++.++|||||||++|||++ |+.||.+.........+.....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~- 233 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLAD---NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNR- 233 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhc---CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCc-
Confidence 998754321 123457889998765 567889999999999999999 8888876654444333332210
Q ss_pred cccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 282 ELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
... +......+.+++.+||+.+|++|||+.++++.|+++
T Consensus 234 ------~~~--~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 ------LKQ--PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ------CCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111 112234788999999999999999999999999876
No 236
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.4e-40 Score=289.20 Aligned_cols=247 Identities=20% Similarity=0.233 Sum_probs=200.5
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec--CCceeEEE
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA--PGERIIVS 138 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 138 (332)
+|+..+.||.|+||.||++. ..+++.+|+|.+............+..|+..++.++|+|++++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 47788999999999999998 5688999999987654433344457889999999999999999997753 45678999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhh-----cCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLH-----QGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh-----~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
||+++++|.+++.........+++..++.++.|++.|+.||| +. +++|+||+|+||++++++.+|++|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999764333344889999999999999999999 66 9999999999999999999999999998
Q ss_pred ccCCcc------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCc
Q 020027 214 FLAPEE------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287 (332)
Q Consensus 214 ~~~~~~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (332)
...... ..++..|++||.+.. ..++.++|+||||+++|+|++|+.||...........+..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------ 228 (265)
T cd08217 158 KILGHDSSFAKTYVGTPYYMSPEQLNH---MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFR------ 228 (265)
T ss_pred ccccCCcccccccccCCCccChhhhcC---CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCC------
Confidence 765432 246788999999876 56889999999999999999999999876544443333332211
Q ss_pred CCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 288 ~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..+......+.+++.+||+.+|++|||+.+|++
T Consensus 229 ---~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 229 ---RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ---CCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 111123347889999999999999999999986
No 237
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=300.95 Aligned_cols=249 Identities=22% Similarity=0.214 Sum_probs=213.1
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-ccccHHHHHHHhccCC-CCCccceeeeeecCCce
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQ-HPNIVPILGFSQAPGER 134 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 134 (332)
...+.|+..+.||+|.||.||++. ..+|+.+|+|.+.+...... ......+|+.+|+.+. |||||.+++.++..+..
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 345678888999999999999999 55799999999987665433 2346799999999998 99999999999999999
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC----CceEEccC
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK----FCARVCDY 210 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~----~~~kl~df 210 (332)
+++||++.||.|.+.+... .+++..+..++.|++.++.|||+. |++||||||+|+|+... +.+|++||
T Consensus 112 ~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DF 183 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDF 183 (382)
T ss_pred EEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeC
Confidence 9999999999999999765 178999999999999999999998 99999999999999643 47999999
Q ss_pred CccccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccC
Q 020027 211 GLSFLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 211 g~a~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
|+|...... ..||+.|+|||.... ..++..+||||+|+++|.|++|..||.+.........+..+.+
T Consensus 184 Gla~~~~~~~~~~~~~Gtp~y~APEvl~~---~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~----- 255 (382)
T KOG0032|consen 184 GLAKFIKPGERLHTIVGTPEYVAPEVLGG---RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF----- 255 (382)
T ss_pred CCceEccCCceEeeecCCccccCchhhcC---CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC-----
Confidence 999876552 379999999999876 6899999999999999999999999999877766666666543
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+..+........+.+++..++..||..|+|+.++++
T Consensus 256 -~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 256 -DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred -CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 2233333344557889999999999999999999987
No 238
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=293.19 Aligned_cols=259 Identities=19% Similarity=0.233 Sum_probs=215.5
Q ss_pred HHHHHhcCCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeee
Q 020027 54 TEIDAATDGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF 127 (332)
Q Consensus 54 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 127 (332)
+++.....++....++-+|.||.||+|.+. +.+.|.+|.++.... .-+...++.|-..+..+.|||+.++.+.
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS-~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHAS-QIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhccc-HHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 345555677888889999999999999643 345677777764332 2222347788888888999999999999
Q ss_pred eecC-CceeEEEeccCCCCHHHHhcccC----CCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC
Q 020027 128 SQAP-GERIIVSEFINMASLDFYLHENN----DGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202 (332)
Q Consensus 128 ~~~~-~~~~lv~e~~~~~~L~~~l~~~~----~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 202 (332)
+..+ ...++++.++.-|+|..|+...+ .....++-.+...++.|++.|++|||++ +++|.||..+|+++|+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhh
Confidence 8654 67789999999999999997432 2334467778889999999999999999 99999999999999999
Q ss_pred CceEEccCCccccCC--------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHH
Q 020027 203 FCARVCDYGLSFLAP--------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALP 273 (332)
Q Consensus 203 ~~~kl~dfg~a~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~ 273 (332)
..+|++|=.+++..- ++......||++|.+.. ..|+.++|+||||+++|||+| |+.|+...++.++..
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n---~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ 509 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN---SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEH 509 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhh---hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHH
Confidence 999999999987542 23345678999999988 789999999999999999999 999999999999999
Q ss_pred HhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
+++++ ++..++.+|+++++.+|.-||+.+|++||+++|++..|.+.
T Consensus 510 ylkdG---------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 510 YLKDG---------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred HHhcc---------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 98885 34556778889999999999999999999999999999863
No 239
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.2e-40 Score=296.35 Aligned_cols=250 Identities=18% Similarity=0.199 Sum_probs=199.7
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|+..+.||+|+||.||++. ..+++.|++|.+....... .....+.+|+.+++.++||||+++++.+..++..+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 468889999999999999999 4578899999987553221 22235678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC-
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP- 217 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~- 217 (332)
||+++++|.+++.... .+++..+..++.|++.|+.|||++ +++||||||+||+++.++.+|++|||+++...
T Consensus 81 e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKNIG----ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 9999999999997543 278888999999999999999998 99999999999999999999999999876311
Q ss_pred --------------------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh
Q 020027 218 --------------------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE 277 (332)
Q Consensus 218 --------------------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~ 277 (332)
....++..|++||.+.. ..++.++|+|||||++||+++|..||.+............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~ 230 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR---QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS 230 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 01135678999998865 5678999999999999999999999987655544433332
Q ss_pred cccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 278 MRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
.... .+.. .......+.+++.+||+.||++|||+.++.+.|+.
T Consensus 231 ~~~~---~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 231 DDIE---WPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred cccC---CCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 2111 0110 01223467899999999999999997777766654
No 240
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.8e-41 Score=329.18 Aligned_cols=256 Identities=20% Similarity=0.230 Sum_probs=198.4
Q ss_pred HHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec--CCc
Q 020027 57 DAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA--PGE 133 (332)
Q Consensus 57 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~ 133 (332)
+...++|...+.||+|+||.||+++ ..++..+|+|.+............+..|+.+++.++||||+++++++.. ...
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 3456789999999999999999999 4578899999987654444444467899999999999999999998754 456
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCC----CCCeeecCCCCCCEEeCC--------
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV----APNIIHGCIKASNILLNE-------- 201 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~----~~~ivH~dlk~~Nill~~-------- 201 (332)
++++|||+++++|.+++.........+++..++.++.||+.||.|||+.. ..+|+||||||+|||++.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999999999999764322234899999999999999999999852 125999999999999964
Q ss_pred ---------CCceEEccCCccccCCc-----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh
Q 020027 202 ---------KFCARVCDYGLSFLAPE-----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL 267 (332)
Q Consensus 202 ---------~~~~kl~dfg~a~~~~~-----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~ 267 (332)
.+.+||+|||++..... ...+|+.|+|||.+... ...++.++|||||||++|||+||+.||....
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge-~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHE-TKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhcc-CCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 33589999999876432 23588999999988542 1457899999999999999999999997543
Q ss_pred HH-HHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 268 VK-WALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 268 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.. .....+... +.+... ....++.+++..||+.+|++|||+.|++.
T Consensus 248 ~~~qli~~lk~~-------p~lpi~---~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 NFSQLISELKRG-------PDLPIK---GKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred cHHHHHHHHhcC-------CCCCcC---CCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 22 221222111 111111 11246889999999999999999999983
No 241
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.6e-40 Score=293.96 Aligned_cols=253 Identities=21% Similarity=0.179 Sum_probs=192.4
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|+..+.||+|+||.||+|+. .+|+.+|+|.++...........+.+|+..++.++|+|++++++++...+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 477788999999999999994 5899999999976543333334568899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
++ ++|.+++..... .+++..++.++.|+++||.|||++ +++|+||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CD-QDLKKYFDSCNG---DIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CC-CCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 97 577777754322 278999999999999999999998 9999999999999999999999999998754321
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCC-chhHHHHHHHhhhc-------c---cccc
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEE-GLLVKWALPLIKEM-------R---FSEL 283 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~-~~~~~~~~~~~~~~-------~---~~~~ 283 (332)
..++..|++||.+... ..++.++|||||||++|||+||+.|+. +.........+... . ..+.
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred CCcCCCccccCCcChHHHhCC--cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhc
Confidence 2457789999987642 456889999999999999999988853 33222222211110 0 0000
Q ss_pred cCCc----CCC-----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 284 LDPR----LAI-----PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 284 ~~~~----~~~-----~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+.. ... ........++.+++.+||+.||.+|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000 000 000112346779999999999999999999875
No 242
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.7e-40 Score=291.37 Aligned_cols=245 Identities=26% Similarity=0.365 Sum_probs=194.2
Q ss_pred ceeeccCCeEEEEEEeCC-------CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 67 RIIGQGRLGTVYAALLST-------GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
+.||+|+||.||+|+..+ ++.+|+|.+..... ......+.+|+.+++.++||||+++++++...+..+++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 368999999999998432 25799998864322 2223357899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCC---CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC-----ceEEccCC
Q 020027 140 FINMASLDFYLHENND---GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF-----CARVCDYG 211 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-----~~kl~dfg 211 (332)
|+++++|.+++..... ....+++.+++.++.|++.|+.|||+. +++|+||+|+||+++.++ .++++|||
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 9999999999975321 123378899999999999999999998 999999999999999877 89999999
Q ss_pred ccccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhccccc
Q 020027 212 LSFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSE 282 (332)
Q Consensus 212 ~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 282 (332)
++...... ..++..|++||.+.. ..++.++|||||||++|||+| |..||...........+..+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--- 230 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLD---GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG--- 230 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHcc---CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC---
Confidence 98643221 134578999998876 678999999999999999998 999987654444433332211
Q ss_pred ccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 283 LLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 283 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
. ...+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 231 ----~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 ----R--LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ----c--cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1 11122234578899999999999999999999999864
No 243
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=9.4e-41 Score=301.59 Aligned_cols=232 Identities=21% Similarity=0.280 Sum_probs=185.3
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-ccccHHHHHHHhccC-CCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|+ ..+++.||+|.++....... ....+..|+.++.++ +||||+++++++...+..+++|||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999 46788999999986543222 222467888888877 699999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC------
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP------ 217 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~------ 217 (332)
++|..++..... +++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++....
T Consensus 81 ~~L~~~~~~~~~----l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (327)
T cd05617 81 GDLMFHMQRQRK----LPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT 153 (327)
T ss_pred CcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce
Confidence 999988865432 88999999999999999999998 99999999999999999999999999986421
Q ss_pred cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH-------HHHHHHhhhcccccccCCcCCC
Q 020027 218 EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV-------KWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 218 ~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
....|+..|+|||.+.. ..++.++|||||||++|||+||+.||..... +.....+.. .....
T Consensus 154 ~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 222 (327)
T cd05617 154 STFCGTPNYIAPEILRG---EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--------KPIRI 222 (327)
T ss_pred ecccCCcccCCHHHHCC---CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--------CCCCC
Confidence 12357899999999876 6788999999999999999999999964211 112222211 11122
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCH
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSI 318 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~ 318 (332)
+.. ...++.+++.+||+.||++||++
T Consensus 223 p~~--~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 223 PRF--LSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCC--CCHHHHHHHHHHhccCHHHcCCC
Confidence 211 22367799999999999999985
No 244
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.5e-40 Score=291.37 Aligned_cols=243 Identities=26% Similarity=0.296 Sum_probs=198.2
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|+..+.||.|+||.||+|. ..+++.||+|.+..... ......+.+|+.+++.++|+|++++++++..+...++++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 367888999999999999999 45789999999875432 2222357889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+++++|.+++... .+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.++++|||++......
T Consensus 80 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 80 YCGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred eeCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 99999999998754 378999999999999999999998 9999999999999999999999999998665432
Q ss_pred ------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCC
Q 020027 220 ------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 220 ------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
..++..|++||.... ..++.++||||||+++||++||+.||.+.........+.... .+.....
T Consensus 152 ~~~~~~~~~~~~y~~PE~~~~---~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-----~~~~~~~-- 221 (274)
T cd06609 152 MSKRNTFVGTPFWMAPEVIKQ---SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN-----PPSLEGN-- 221 (274)
T ss_pred ccccccccCCccccChhhhcc---CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC-----CCCCccc--
Confidence 246778999999876 568999999999999999999999997654433322222211 1111110
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 294 IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....+.+++.+||..||++|||++++++
T Consensus 222 -~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 222 -KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred -ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 02336789999999999999999999975
No 245
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.1e-40 Score=295.59 Aligned_cols=247 Identities=21% Similarity=0.277 Sum_probs=193.9
Q ss_pred CCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccc-cccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
|+..+.||+|+||.||++. ..+++.||+|.+......... ...+.+|+.+++.++|+|++.+++.+...+..+++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 6777899999999999998 568899999998754332222 22357899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++..... ..+++..++.++.|++.||.|||+. +++||||||+||+++.++.++++|||++......
T Consensus 82 ~~g~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 82 MNGGDLKFHIYHMGE--AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred cCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 999999998865332 2378899999999999999999998 9999999999999999999999999998654322
Q ss_pred ----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 220 ----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 220 ----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
..++..|+|||.... ..++.++||||||+++|||++|+.||.+............. ... ..... + ..
T Consensus 157 ~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~-~~~-~~~~~--~--~~ 227 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKN---ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL-VKE-VQEEY--S--EK 227 (285)
T ss_pred cccCCCCCccccChHHHcC---CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhh-hhh-hhhhc--C--cc
Confidence 357889999999876 67889999999999999999999999764221111101000 000 00011 1 11
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 020027 296 PLVRLAKVALACVGNSRKNRPS-----IVQVAT 323 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RPs-----~~~i~~ 323 (332)
....+.+++.+||+.||++||| +.|+++
T Consensus 228 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 228 FSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 2235779999999999999999 778775
No 246
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-41 Score=323.39 Aligned_cols=259 Identities=22% Similarity=0.336 Sum_probs=213.6
Q ss_pred HHHHhcCCCCCCceeeccCCeEEEEEEeC----C----CCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCcccee
Q 020027 55 EIDAATDGFSHRRIIGQGRLGTVYAALLS----T----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPIL 125 (332)
Q Consensus 55 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~ 125 (332)
.++...++....+.||+|.||.|++|... . ...||||.++..... .+...+..|+.+|+.+ +|+|++.++
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 45555556666779999999999999831 1 457999999866554 5556789999999988 699999999
Q ss_pred eeeecCCceeEEEeccCCCCHHHHhcccC---C-CC--------CcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCC
Q 020027 126 GFSQAPGERIIVSEFINMASLDFYLHENN---D-GA--------SLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIK 193 (332)
Q Consensus 126 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~-~~--------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 193 (332)
|+|...+..++++||+..|+|..|++... . .. ..++....+.++.|||.||+||++. +++||||.
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLA 445 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLA 445 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhh
Confidence 99999999999999999999999998765 0 00 1378889999999999999999998 99999999
Q ss_pred CCCEEeCCCCceEEccCCccccCCccc-------CC--cccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCC
Q 020027 194 ASNILLNEKFCARVCDYGLSFLAPEEK-------RG--LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCE 263 (332)
Q Consensus 194 ~~Nill~~~~~~kl~dfg~a~~~~~~~-------~~--~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~ 263 (332)
.+|||+..+..+||+|||+|+...... .+ ...|||||.+.. ..++.+|||||||++|||++| |..||
T Consensus 446 aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~---~~ft~kSDVWSfGI~L~EifsLG~~PY 522 (609)
T KOG0200|consen 446 ARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD---RVFTSKSDVWSFGILLWEIFTLGGTPY 522 (609)
T ss_pred hhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc---CcccccchhhHHHHHHHHHhhCCCCCC
Confidence 999999999999999999998543321 11 345999999987 789999999999999999999 89999
Q ss_pred Cchh-HHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 264 EGLL-VKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 264 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
.+.. ..+....++++ .+...+..|..+++++|+.||+.+|++||+|.++.+.++.++
T Consensus 523 p~~~~~~~l~~~l~~G---------~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 523 PGIPPTEELLEFLKEG---------NRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCCcHHHHHHHHhcC---------CCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 8744 34444444443 344455566779999999999999999999999999999865
No 247
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.1e-40 Score=290.78 Aligned_cols=252 Identities=21% Similarity=0.320 Sum_probs=200.4
Q ss_pred CCCCCCceeeccCCeEEEEEEeC------CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLS------TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
++|+..+.||+|+||.||+|+.+ +.+.+++|.+..... ......+.+|+.++++++|+|++++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 57889999999999999999843 346799998764322 11223578999999999999999999999998999
Q ss_pred eEEEeccCCCCHHHHhcccCCCC-----CcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEcc
Q 020027 135 IIVSEFINMASLDFYLHENNDGA-----SLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCD 209 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~d 209 (332)
+++|||+++++|.+++....... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.++++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcc
Confidence 99999999999999997654211 1478999999999999999999998 999999999999999999999999
Q ss_pred CCccccCCc-------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccc
Q 020027 210 YGLSFLAPE-------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFS 281 (332)
Q Consensus 210 fg~a~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 281 (332)
||++..... ...++..|++||.... ...+.++||||||+++||+++ |..||.+................
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~ 237 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE---DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLE 237 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcC
Confidence 999864321 1234567999998765 567889999999999999999 78888765444443333322211
Q ss_pred cccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 282 ELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
.+.+...+..+.+++.+||+.||++|||+.|+++.|.+
T Consensus 238 --------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 238 --------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 11111223478899999999999999999999998864
No 248
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-40 Score=296.13 Aligned_cols=244 Identities=22% Similarity=0.271 Sum_probs=197.0
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
..+|...+.||+|+||.||+|. ..+++.||+|.+...... ....+.+|+.+++.++|+|++++++.+..++..+++|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 4678999999999999999999 468999999998654322 2234688999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++.+.. +++..+..++.|++.||.|||+. +++||||||+||+++.++.++++|||++.....
T Consensus 96 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 96 EYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred cccCCCCHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 9999999999986432 68889999999999999999998 999999999999999999999999998865432
Q ss_pred c------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 E------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
. ..++..|++||.... ..++.++|+|||||++|++++|..||.+.........+... .......
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~-------~~~~~~~ 237 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTR---KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-------GTPELQN 237 (297)
T ss_pred CccCcCcccCCccccCHHHHcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC-------CCCCCCC
Confidence 2 246778999998876 66789999999999999999999999765432221111110 0111111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+......+.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 238 PERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1222345778999999999999999999986
No 249
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.3e-40 Score=294.13 Aligned_cols=250 Identities=22% Similarity=0.244 Sum_probs=199.9
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|+..+.||.|+||.||+|.. .+++.+|+|.+..... .....+.+|+.++++++|+|++++++.+..++..+++|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESE--EELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCH--HHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 45688899999999999999995 5789999999864422 22235788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 82 EFCDGGALDSIMLELER---GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred eccCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 99999999999875432 378999999999999999999998 999999999999999999999999998765432
Q ss_pred c------cCCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 219 E------KRGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
. ..++..|++||..... ....++.++|+||||+++|||++|+.||.+.........+..... +.+..
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~ 230 (280)
T cd06611 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEP-----PTLDQ 230 (280)
T ss_pred cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCC-----CCcCC
Confidence 2 2467889999987532 234578899999999999999999999987644333322222111 11111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
+......+.+++.+||+.||++|||+.++++.
T Consensus 231 --~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 231 --PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --cccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 11223467899999999999999999999763
No 250
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.8e-40 Score=293.44 Aligned_cols=248 Identities=25% Similarity=0.282 Sum_probs=196.7
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
..|...+.||+|+||.||+|.. .+++.||+|.+........ ....+.+|+.+++.++|||++++.+++..++..++++
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 4588889999999999999984 5789999999864432222 2235788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||++ +++.+++..... .+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~~~---~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEVHKK---PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHHccc---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9997 567666654322 278999999999999999999998 999999999999999999999999999876543
Q ss_pred c--cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHH
Q 020027 219 E--KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKP 296 (332)
Q Consensus 219 ~--~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (332)
. ..++..|++||.+.......++.++||||||+++|||+||+.||.+.........+.... .+.. .....
T Consensus 168 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~-----~~~~---~~~~~ 239 (307)
T cd06607 168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND-----SPTL---SSNDW 239 (307)
T ss_pred CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCC-----CCCC---Cchhh
Confidence 2 356778999998864434668899999999999999999999997654333222221111 0111 11223
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 297 LVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 297 ~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...+.+++.+||+.||++|||+.+++.
T Consensus 240 ~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 240 SDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 447889999999999999999999986
No 251
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.9e-40 Score=289.51 Aligned_cols=242 Identities=20% Similarity=0.261 Sum_probs=197.4
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... ......+.+|+.+++.++|+|++++++.+..++..+++|||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 477788999999999999994 5788999998864422 12233578899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++... .+++.....++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 84 ~~~~~L~~~i~~~-----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 84 LGGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 9999999998643 268888999999999999999998 9999999999999999999999999998654332
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|++||.+.. ...+.++|+|||||++|||+||..||.+.........+.... ......
T Consensus 156 ~~~~~~~~~~~y~apE~~~~---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~---------~~~~~~ 223 (277)
T cd06640 156 IKRNTFVGTPFWMAPEVIQQ---SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN---------PPTLTG 223 (277)
T ss_pred cccccccCcccccCHhHhcc---CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC---------CCCCch
Confidence 245778999998865 568899999999999999999999998665443332221110 111122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
.....+.+++.+||+.+|++|||+.++++.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 224 EFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 344578899999999999999999999764
No 252
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-40 Score=301.88 Aligned_cols=187 Identities=21% Similarity=0.257 Sum_probs=160.0
Q ss_pred hcCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
...+|...+.||+|+||.||+|+. .+++.||+|..... ....|+.++++++|+||+++++++...+..+++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 445799999999999999999994 56789999974322 236789999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
+|++. ++|.+++..... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 136 ~e~~~-~~l~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRSR---PLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EEccC-CcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 99995 688888764322 378999999999999999999998 99999999999999999999999999987532
Q ss_pred c-----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCC
Q 020027 218 E-----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCE 263 (332)
Q Consensus 218 ~-----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~ 263 (332)
. ...||..|++||.+.. ..++.++|||||||++|||+++..++
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 209 VAPAFLGLAGTVETNAPEVLAR---DKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cCcccccccccccccCCeecCC---CCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 2 2357889999999876 67899999999999999999965544
No 253
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.6e-40 Score=293.80 Aligned_cols=259 Identities=24% Similarity=0.254 Sum_probs=200.6
Q ss_pred ChHHHHHhcCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeee
Q 020027 52 PLTEIDAATDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQ 129 (332)
Q Consensus 52 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 129 (332)
+...+....++|...+.||+|+||.||++.. .+++.+|+|.+..... ....+.+|+.++.++ +|||++++++++.
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 3455566788999999999999999999994 6789999999864321 122457888889888 8999999999986
Q ss_pred cC-----CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCc
Q 020027 130 AP-----GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFC 204 (332)
Q Consensus 130 ~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 204 (332)
.. +..++++||+++++|.++++........+++..++.++.|++.||.|||+. +++|+||||+||++++++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGG 166 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCC
Confidence 43 357999999999999998865322233478999999999999999999998 9999999999999999999
Q ss_pred eEEccCCccccCCc------ccCCcccccCcccccccC--CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhh
Q 020027 205 ARVCDYGLSFLAPE------EKRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIK 276 (332)
Q Consensus 205 ~kl~dfg~a~~~~~------~~~~~~~~~~pe~~~~~~--~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~ 276 (332)
+|++|||++..... ...++..|++||.+.... ...++.++|||||||++|||++|+.||...........+.
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~ 246 (291)
T cd06639 167 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIP 246 (291)
T ss_pred EEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHh
Confidence 99999999865432 234678899999875421 2246899999999999999999999997654333222222
Q ss_pred hcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 277 EMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.... +... .+......+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~-----~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 247 RNPP-----PTLL--HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cCCC-----CCCC--cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 2111 1111 11122336889999999999999999999875
No 254
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3e-40 Score=297.00 Aligned_cols=190 Identities=18% Similarity=0.240 Sum_probs=155.0
Q ss_pred CceeeccCCeEEEEEEeC---CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec--CCceeEEEec
Q 020027 66 RRIIGQGRLGTVYAALLS---TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA--PGERIIVSEF 140 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~ 140 (332)
.+.||+|+||.||+|+.. +++.+|+|.+.... ......+|+.+++.++||||+++++++.. +...++++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 467999999999999843 56789999986432 12346789999999999999999998854 4567899999
Q ss_pred cCCCCHHHHhcccCC-----CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEe----CCCCceEEccCC
Q 020027 141 INMASLDFYLHENND-----GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILL----NEKFCARVCDYG 211 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~-----~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~~~~kl~dfg 211 (332)
+. ++|.+++..... ....+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 82 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred cC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 95 578777753221 122478889999999999999999999 99999999999999 456789999999
Q ss_pred ccccCCc---------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCc
Q 020027 212 LSFLAPE---------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265 (332)
Q Consensus 212 ~a~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~ 265 (332)
+++.... ...+|..|+|||.+... ..++.++||||+||++|||+||+.||.+
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ceeccCCCCccccccCCccccccccCCHHHcCC--CCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 9875432 12468889999988652 4578999999999999999999999864
No 255
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.4e-41 Score=308.06 Aligned_cols=200 Identities=25% Similarity=0.287 Sum_probs=172.0
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC-C-----CCccceeeeeecCCce
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-H-----PNIVPILGFSQAPGER 134 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~~~ 134 (332)
+|...+.||+|+||.|.+|. .++++.||||++++...... ....|+.+|..++ | -|+|++++++...++.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~---Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLR---QAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHH---HHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 67888999999999999999 77999999999987643322 2367888888886 3 4999999999999999
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC--CCceEEccCCc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE--KFCARVCDYGL 212 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~--~~~~kl~dfg~ 212 (332)
|||+|.+. -+|+++++.+.-. .++...+..|+.||+.||.+||+. +|||+||||+|||+.+ ...+||+|||.
T Consensus 264 ciVfELL~-~NLYellK~n~f~--Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 264 CIVFELLS-TNLYELLKNNKFR--GLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeeehhhh-hhHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccc
Confidence 99999994 6999999987544 389999999999999999999998 9999999999999964 45799999999
Q ss_pred cccCCccc---CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHH
Q 020027 213 SFLAPEEK---RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP 273 (332)
Q Consensus 213 a~~~~~~~---~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~ 273 (332)
|....... ..+..|.|||.+.+ .+|+.+.||||||||+.||+||.+.|.|....+.+.
T Consensus 338 Sc~~~q~vytYiQSRfYRAPEVILG---lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~ 398 (586)
T KOG0667|consen 338 SCFESQRVYTYIQSRFYRAPEVILG---LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLA 398 (586)
T ss_pred ccccCCcceeeeeccccccchhhcc---CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHH
Confidence 98876654 34568999999988 899999999999999999999998887765544433
No 256
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-40 Score=293.50 Aligned_cols=254 Identities=22% Similarity=0.260 Sum_probs=197.8
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|+..+.||+|+||.||++. .++|+.+|+|.+..... ......+.+|+.+++.++||||+++++.+...+..++++
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK-SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc-chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 4568888999999999999999 45789999998865422 222335789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++.... .+++..+..++.|++.|+.|||+. .+++|+||+|+||++++++.++++|||++.....
T Consensus 83 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~ 156 (284)
T cd06620 83 EFMDCGSLDRIYKKGG----PIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN 156 (284)
T ss_pred ecCCCCCHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhh
Confidence 9999999999886543 278999999999999999999963 1899999999999999999999999998865322
Q ss_pred ----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHH----HHHHhhhcccccccCCcCCC
Q 020027 219 ----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKW----ALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 219 ----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 290 (332)
...++..|++||.... ..++.++|+|||||++||++||+.||....... ....+.+ ............
T Consensus 157 ~~~~~~~~~~~~~aPE~~~~---~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 232 (284)
T cd06620 157 SIADTFVGTSTYMSPERIQG---GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD-LLQQIVQEPPPR 232 (284)
T ss_pred hccCccccCcccCCHHHHcc---CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH-HHHHHhhccCCC
Confidence 2357889999998765 578899999999999999999999997643310 0000000 001111111111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
......+.++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 233 LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1111233468899999999999999999999975
No 257
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=8.7e-40 Score=285.93 Aligned_cols=249 Identities=25% Similarity=0.356 Sum_probs=199.0
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|...+.||+|+||.||+|. ..+++.|++|.++...........+.+|+.+++.++|+||+++++++...+..++++||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 47788999999999999998 45789999999976654323444678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++..... +++..+..++.|++.|+.|||+. +++|+||+|+||++++++.+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~----~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEHGRI----LDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhhcCC----CChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999975432 67888999999999999999998 9999999999999999999999999988654321
Q ss_pred ---------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 220 ---------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 220 ---------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
..++..|++||..........+.++||||||+++||+++|+.||.+....+........ ......
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~ 227 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA------GHKPPI 227 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc------CCCCCC
Confidence 24567899999987643234789999999999999999999999765322222211111 111112
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+........+.+++.+||+.||++|||+.+++.
T Consensus 228 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 222222346779999999999999999999874
No 258
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.1e-40 Score=294.85 Aligned_cols=247 Identities=20% Similarity=0.226 Sum_probs=198.9
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|+..+.||+|+||.||+|.. .+++.+|+|.+....... .....+..|+..++.++|+||+++++.+...+..+++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 3688889999999999999994 468999999997654332 23335788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+.+++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++++|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQPG--KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhCCC--CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 99999999999875422 2378899999999999999999998 999999999999999999999999998754321
Q ss_pred c-----------------------------------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCC
Q 020027 219 E-----------------------------------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCE 263 (332)
Q Consensus 219 ~-----------------------------------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~ 263 (332)
. ..|+..|++||.+.. ..++.++||||||+++|+|++|+.||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Di~slG~ll~~l~~g~~pf 232 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG---DGHGSAVDWWTLGILLYEMLYGTTPF 232 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC---CCCCchHHHHHHHHHHHHHhhCCCCC
Confidence 1 135778999999875 56789999999999999999999999
Q ss_pred CchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCC----HHHHHH
Q 020027 264 EGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPS----IVQVAT 323 (332)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs----~~~i~~ 323 (332)
.+.........+... ....+........+.+++.+||+.||++||| +.|+++
T Consensus 233 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 233 KGSNRDETFSNILKK--------EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCCchHHHHHHHhcC--------CccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 876544433322221 1112222223457889999999999999999 666665
No 259
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.2e-40 Score=291.67 Aligned_cols=253 Identities=23% Similarity=0.299 Sum_probs=197.9
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|+..+.||+|+||.||++.. .+++.||+|.++.... ......+.+|+.++++++|+||+++++.+..++..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD-ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 4678889999999999999995 4889999998865421 2222357889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE- 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~- 218 (332)
|+++++|..++..... ...+++..+..++.|++.||.|||+. .+++|+||||+||+++.++.+|++|||++.....
T Consensus 80 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 80 YMDAGSLDKLYAGGVA-TEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred ecCCCCHHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 9999999998875321 22479999999999999999999963 1899999999999999999999999999865432
Q ss_pred ---ccCCcccccCcccccccC---CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 ---EKRGLAGYVDDDYWHEKG---GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ---~~~~~~~~~~pe~~~~~~---~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
...++..|++||.+.... ...++.++|+|||||++||+++|+.||...........+... .... ....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~-----~~~~-~~~~ 230 (286)
T cd06622 157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI-----VDGD-PPTL 230 (286)
T ss_pred ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH-----hhcC-CCCC
Confidence 224677899999875431 234688999999999999999999999764433332222111 0000 0111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+......+.+++.+||+.+|++||++.++++
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 231 PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred CcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 1223457789999999999999999999986
No 260
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.3e-40 Score=291.00 Aligned_cols=251 Identities=24% Similarity=0.346 Sum_probs=191.6
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHH-hccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKT-LSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|+..+.||+|+||.||++.. .+|+.||+|.++....... ...+..|+.. ++..+|||++++++++..++..+++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 4688889999999999999994 5799999999876533222 2234555554 56678999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||++ ++|.+++.........+++..++.++.|++.||.|||+++ +++||||||+||+++.++.+||+|||++.....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9996 6888877653333345899999999999999999999752 799999999999999999999999999875432
Q ss_pred c-----cCCcccccCcccccccCC-CCCCchhhhHHHHHHHHHHHhCCCCCCchhH-HHHHHHhhhcccccccCCcCCCC
Q 020027 219 E-----KRGLAGYVDDDYWHEKGG-GNATRESDVYGFGVVLLEILSGRRCEEGLLV-KWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 219 ~-----~~~~~~~~~pe~~~~~~~-~~~~~~~DiwS~G~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
. ..++..|++||.+..... ..++.++|+|||||++|||++|+.||..... ........... .+.. +
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~--~ 229 (283)
T cd06617 157 SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP-----SPQL--P 229 (283)
T ss_pred ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC-----CCCC--C
Confidence 2 246778999998865322 4578899999999999999999999864211 11111111110 1111 1
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
. ...+.++.+++.+||+.+|++|||+.++++
T Consensus 230 ~-~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 230 A-EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred c-cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 112346889999999999999999999986
No 261
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.4e-40 Score=288.29 Aligned_cols=253 Identities=23% Similarity=0.229 Sum_probs=194.0
Q ss_pred HHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 57 DAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 57 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
+.+++++.....||+|+||.||+|. ..++..||+|.+..... .....+.+|+.+++.++|+||+++++++..++..+
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS--RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH--HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 3456666777899999999999999 55788999998865432 22235789999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC-CCceEEccCCccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE-KFCARVCDYGLSF 214 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~dfg~a~ 214 (332)
+++||+++++|.+++...... ...++..+..++.|++.|++|||+. +++||||||+||+++. ++.++|+|||.+.
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGP-LKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEecCCCCCHHHHHHHhccc-CCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 999999999999998753211 1127788889999999999999998 9999999999999976 6799999999886
Q ss_pred cCCc------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcC
Q 020027 215 LAPE------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 215 ~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (332)
.... ...++..|++||.+... ...++.++|+||||+++|||++|+.||.......... .... .. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~-~~~~-~~---~~~- 230 (268)
T cd06624 158 RLAGINPCTETFTGTLQYMAPEVIDKG-PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM-FKVG-MF---KIH- 230 (268)
T ss_pred ecccCCCccccCCCCccccChhhhccc-cccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH-hhhh-hh---ccC-
Confidence 5422 12467899999998542 1347889999999999999999999986532111100 0000 00 001
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...+.....++.+++.+||+.+|++|||+.|+++
T Consensus 231 -~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 231 -PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred -CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 1111223346889999999999999999999875
No 262
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.5e-40 Score=289.22 Aligned_cols=253 Identities=23% Similarity=0.262 Sum_probs=198.9
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCC---
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPG--- 132 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~--- 132 (332)
..+++|+..+.||+|+||.||+|.. .+++.+++|.+..... ....+.+|+.+++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 3568899999999999999999995 5788999999875432 223578999999998 7999999999986544
Q ss_pred ---ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEcc
Q 020027 133 ---ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCD 209 (332)
Q Consensus 133 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~d 209 (332)
..+++|||+++++|.+++.........+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+|++|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 48999999999999999875432223478999999999999999999998 999999999999999999999999
Q ss_pred CCccccCCc------ccCCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccc
Q 020027 210 YGLSFLAPE------EKRGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFS 281 (332)
Q Consensus 210 fg~a~~~~~------~~~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 281 (332)
||++..... ...++..|+|||.+... ....++.++||||||+++||++||..||...........+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~- 235 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP- 235 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCC-
Confidence 998865432 22467889999987542 234578899999999999999999999976543333222222111
Q ss_pred cccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 282 ELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+ ....+......+.+++.+||+.||++|||+.++++
T Consensus 236 ----~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 236 ----P--TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ----C--CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1 11112223346789999999999999999999875
No 263
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.3e-40 Score=299.64 Aligned_cols=252 Identities=19% Similarity=0.201 Sum_probs=195.6
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||+++. .+++.+|+|.+.+..... .....+.+|+.++..++|+||+++++.+..++..+++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 4688899999999999999994 567899999986432222 22224678889999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++|+|.+++..... .+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++.....
T Consensus 81 ey~~~g~L~~~l~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSKFED---RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 99999999999976322 278888999999999999999998 999999999999999999999999999864321
Q ss_pred -------ccCCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 219 -------EKRGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 219 -------~~~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
...||..|+|||.+... ....++.++|||||||++|||++|+.||.+.........+..... ...
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~------~~~ 228 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE------RFQ 228 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc------ccc
Confidence 12578999999998632 124678999999999999999999999987655554444432211 111
Q ss_pred CCC-ChHHHHHHHHHHHHcccCCCC--CCCCHHHHHHH
Q 020027 290 IPC-EIKPLVRLAKVALACVGNSRK--NRPSIVQVATI 324 (332)
Q Consensus 290 ~~~-~~~~~~~l~~l~~~c~~~dp~--~RPs~~~i~~~ 324 (332)
.+. .......+.+++.+|+..+++ .||++.++++.
T Consensus 229 ~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 111 112234677888888765444 36888888754
No 264
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6.8e-41 Score=302.93 Aligned_cols=237 Identities=19% Similarity=0.224 Sum_probs=185.3
Q ss_pred eeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccC---CCCCccceeeeeecCCceeEEEeccCC
Q 020027 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLA---QHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 69 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
||+|+||.||+|+ ..+++.||+|.+....... ........|..++... +||||+++++.+..++..+++|||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 6999999999999 4578999999986533221 1122344555555544 699999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-----
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE----- 218 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~----- 218 (332)
++|..++..... +++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~l~~~~~----~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~ 153 (330)
T cd05586 81 GELFWHLQKEGR----FSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTT 153 (330)
T ss_pred ChHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCc
Confidence 999988875432 78999999999999999999998 999999999999999999999999999865321
Q ss_pred -ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 219 -EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 219 -~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
...|+..|+|||.+... ..++.++|||||||++|||+||+.||.+.........+..+.. ..+.. ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~--~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--------~~~~~-~~~ 222 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDE--KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV--------RFPKN-VLS 222 (330)
T ss_pred cCccCCccccCHHHHcCC--CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC--------CCCCc-cCC
Confidence 23578999999988642 4578999999999999999999999987665555444433221 11111 112
Q ss_pred HHHHHHHHHcccCCCCCCCC----HHHHHH
Q 020027 298 VRLAKVALACVGNSRKNRPS----IVQVAT 323 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs----~~~i~~ 323 (332)
..+.+++.+||+.||++||+ +.++++
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 36678999999999999995 555443
No 265
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.5e-39 Score=284.95 Aligned_cols=244 Identities=21% Similarity=0.229 Sum_probs=192.2
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc---ccccHHHHHHHhccCCCCCccceeeeeecC--Cce
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN---AGFGFASVIKTLSLAQHPNIVPILGFSQAP--GER 134 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 134 (332)
++|...+.||+|+||.||.|. ..++..||+|.+........ ....+.+|+.+++.++||||+++++++..+ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 468889999999999999998 46789999999864332221 123567899999999999999999988653 467
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
+++|||+++++|.+++..... +++...+.++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGA----LTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 899999999999999875432 67888899999999999999998 99999999999999999999999999886
Q ss_pred cCCc---------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccC
Q 020027 215 LAPE---------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 215 ~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
.... ...++..|++||.+.. ..++.++|+|||||++|||++|+.||.+.............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~------- 224 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISG---EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ------- 224 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcC---CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcC-------
Confidence 4321 1246778999998865 56789999999999999999999999765333222111111
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+ .....+......+.+++.+||. +|++|||++++++
T Consensus 225 ~-~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 225 P-TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred C-CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0 0111122333467789999995 9999999999875
No 266
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=7e-40 Score=285.42 Aligned_cols=245 Identities=22% Similarity=0.281 Sum_probs=197.3
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|...+.||+|+||.||+|.. .+|..+|+|.+............+.+|+.+++.++|+|++++++.+...+..++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 477788999999999999994 5788999999876543333334577999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC-ceEEccCCccccCCcc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF-CARVCDYGLSFLAPEE 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~dfg~a~~~~~~ 219 (332)
+++++|.+++..... ..+++..+..++.|+++|+.|||+. +++|+||+|+||++++++ .+|++|||.+....+.
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQRG--VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 999999999875432 2378999999999999999999998 999999999999998875 4699999988655432
Q ss_pred ------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCC
Q 020027 220 ------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 220 ------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
..++..|++||.... ..++.++|+||||+++||+++|..||................... ..
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------~~ 223 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQN---RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAP---------IS 223 (257)
T ss_pred cccccccCCCccccCHHHHcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCC---------CC
Confidence 246778999998765 568899999999999999999999997654433322222221111 11
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 294 IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
......+.+++.+||+.+|++|||+.++++
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 224 PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 112236789999999999999999999975
No 267
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-41 Score=308.51 Aligned_cols=243 Identities=25% Similarity=0.292 Sum_probs=197.0
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMAS 145 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 145 (332)
-+||+|+||+||.|+ ..+...+|||.+..+.. +...-..+||...+.++|.|||+++|.+..++++-|.||.++||+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds--r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS--REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccc--hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 479999999999999 67888999999865542 333457899999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeC-CCCceEEccCCccccC------Cc
Q 020027 146 LDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLN-EKFCARVCDYGLSFLA------PE 218 (332)
Q Consensus 146 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~~~kl~dfg~a~~~------~~ 218 (332)
|..++++. +++..=.+.++-.+..||++||.|||++ .|||||||-.|+|++ -.|.+||+|||-++.. .+
T Consensus 659 LSsLLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TE 734 (1226)
T KOG4279|consen 659 LSSLLRSK-WGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTE 734 (1226)
T ss_pred HHHHHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCcccc
Confidence 99999763 3331126788888999999999999999 999999999999997 4899999999987543 34
Q ss_pred ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHH
Q 020027 219 EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLV 298 (332)
Q Consensus 219 ~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (332)
...||..|||||..... ...|+.++|||||||.+.||.||++||.......+ .+.+.+-+ ..-.+.+.+-..
T Consensus 735 TFTGTLQYMAPEvIDqG-~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA-AMFkVGmy------KvHP~iPeelsa 806 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQG-PRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA-AMFKVGMY------KVHPPIPEELSA 806 (1226)
T ss_pred ccccchhhhChHhhccC-CcCCCchhhhhhccceeEeeccCCCCeeecCChhH-hhhhhcce------ecCCCCcHHHHH
Confidence 55799999999998753 35689999999999999999999999974321111 22222211 112344555666
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 299 RLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 299 ~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+...++.+|+.+||.+||+++++++
T Consensus 807 eak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 807 EAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHcCCCcccCccHHHhcc
Confidence 8889999999999999999999874
No 268
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.3e-39 Score=285.66 Aligned_cols=244 Identities=21% Similarity=0.285 Sum_probs=190.5
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc---ccccHHHHHHHhccCCCCCccceeeeeec--CCce
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN---AGFGFASVIKTLSLAQHPNIVPILGFSQA--PGER 134 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 134 (332)
.+|...+.||+|+||.||+|. ..++..||+|.+........ ....+.+|+.+++.++||||+++++++.. .+..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 468899999999999999998 45789999999875432221 22347789999999999999999998865 3567
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
++++||+++++|.+++..... +++...+.++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||+++
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~----l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGA----LTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 899999999999999875432 78888999999999999999998 99999999999999999999999999986
Q ss_pred cCCc---------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccC
Q 020027 215 LAPE---------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 215 ~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
.... ...++..|++||.+.. ..++.++|+|||||++||+++|+.||................ ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~----~~ 227 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISG---EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP----TN 227 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCC---CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC----CC
Confidence 4321 1246778999998865 668899999999999999999999997653322211111110 01
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.+ + ......+.+++ +||..+|++|||++|+++
T Consensus 228 ~~~--~--~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 228 PQL--P--SHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCC--c--hhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 111 1 11122455566 788899999999999975
No 269
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.1e-40 Score=291.68 Aligned_cols=254 Identities=20% Similarity=0.198 Sum_probs=195.0
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC--CceeEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GERIIV 137 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 137 (332)
++|+..+.||+|+||.||+|.. .+++.+|+|.++...........+.+|+.++++++||||+++.+++... +..+++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 5788899999999999999995 4788999999976544333233467899999999999999999998877 889999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
+||++ ++|.+++..... .+++...+.++.|++.||.|||+. +++|+||+|+||++++++.+|++|||+++...
T Consensus 85 ~e~~~-~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ---PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcC-cCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 99997 589888865432 378999999999999999999998 99999999999999999999999999987554
Q ss_pred cc------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------------
Q 020027 218 EE------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM------------- 278 (332)
Q Consensus 218 ~~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~------------- 278 (332)
.. ..++..|++||..... ...+.++|+||||+++|||++|..||...........+...
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 158 SPLKPYTQLVVTLWYRAPELLLGA--KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred CCccccccccccccccCchhhcCC--ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 32 2457789999987642 34688999999999999999999999765433222111100
Q ss_pred --------ccccccCCcCCCCCChH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 279 --------RFSELLDPRLAIPCEIK-PLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 279 --------~~~~~~~~~~~~~~~~~-~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.........+....+.. ....+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000000000000100 2346779999999999999999999875
No 270
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1e-39 Score=290.89 Aligned_cols=254 Identities=20% Similarity=0.222 Sum_probs=195.7
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCccc---ccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVL---SNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
+|+..+.||+|+||.||+|.. .+|+.||+|.++..... ......+..|+.+++.++|+||+++++++...+..+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477788999999999999994 57899999999765433 11223457899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||+ +++|.+++.... ..+++..+..++.|+++||.|||++ +++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 899999997543 2388999999999999999999999 99999999999999999999999999987654
Q ss_pred cc------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------------
Q 020027 218 EE------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM------------- 278 (332)
Q Consensus 218 ~~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~------------- 278 (332)
.. ..++..|++||..... ..++.++|+|||||++||+++|..||.+.........+...
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 154 SPNRKMTHQVVTRWYRAPELLFGA--RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVT 231 (298)
T ss_pred CCCccccccccceeeeCHHHHhCC--CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcc
Confidence 32 1345679999987542 46789999999999999999998887654432222211110
Q ss_pred ccccccCCcCCCCCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 279 RFSELLDPRLAIPCE-----IKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 279 ~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
............+.+ ......+.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000000000000 1224578899999999999999999999874
No 271
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.7e-39 Score=285.58 Aligned_cols=250 Identities=24% Similarity=0.343 Sum_probs=194.4
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccc--------cccHHHHHHHhccCCCCCccceeeeeecCC
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA--------GFGFASVIKTLSLAQHPNIVPILGFSQAPG 132 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 132 (332)
+|...+.||+|+||.||+|. ..+|+.+|+|.++........ ...+.+|+..++.++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 46677899999999999998 457899999988643221111 124678899999999999999999999999
Q ss_pred ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCc
Q 020027 133 ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~ 212 (332)
..++++||+++++|.+++.... .+++..+..++.|++.|+.|||++ +++|+||+|+||+++.++.++++|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG----RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccc
Confidence 9999999999999999997652 278888999999999999999998 999999999999999999999999999
Q ss_pred cccCCcc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhccccccc
Q 020027 213 SFLAPEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELL 284 (332)
Q Consensus 213 a~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 284 (332)
+...... ..++..|++||...... ..++.++|+||||+++||+++|..||..................
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--- 230 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYS-QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSA--- 230 (272)
T ss_pred cccccccccccccccccCCccccCHHHhcccc-CCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccC---
Confidence 8654321 24677899999876531 24788999999999999999999999654332222111111101
Q ss_pred CCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 285 DPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.............+.+++.+||+.||++|||+.++++
T Consensus 231 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 231 -PPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred -CcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11111111122347889999999999999999999886
No 272
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.2e-40 Score=311.82 Aligned_cols=254 Identities=19% Similarity=0.202 Sum_probs=186.8
Q ss_pred HHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC------CCCccceeeee
Q 020027 56 IDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ------HPNIVPILGFS 128 (332)
Q Consensus 56 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~ 128 (332)
++...++|...+.||+|+||+||+|. ..+++.||+|+++.... .......|+.+++.++ |.+++++++++
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK---YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh---hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 34456789999999999999999998 45788999999864321 1112345666665554 45688888888
Q ss_pred ecC-CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhc-CCCCCeeecCCCCCCEEeCCCC---
Q 020027 129 QAP-GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ-GVAPNIIHGCIKASNILLNEKF--- 203 (332)
Q Consensus 129 ~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~--- 203 (332)
..+ +..+++||++ +++|.+++..... +++..+..++.|++.||.|||+ . +|+||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~~----l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKHGP----FSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVV 272 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccc
Confidence 654 5788999988 6788888865432 7899999999999999999997 5 899999999999998765
Q ss_pred -------------ceEEccCCccccCCc---ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh
Q 020027 204 -------------CARVCDYGLSFLAPE---EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL 267 (332)
Q Consensus 204 -------------~~kl~dfg~a~~~~~---~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~ 267 (332)
.+||+|||.+..... ...||..|+|||.+.. ..++.++|||||||++|||+||+.||.+..
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~---~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLG---LGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhc---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 499999998764332 2368899999999876 678999999999999999999999998754
Q ss_pred HHHHHHHhhh--cccc-------------ccc------CCcCC--------C---CCChHHHHHHHHHHHHcccCCCCCC
Q 020027 268 VKWALPLIKE--MRFS-------------ELL------DPRLA--------I---PCEIKPLVRLAKVALACVGNSRKNR 315 (332)
Q Consensus 268 ~~~~~~~~~~--~~~~-------------~~~------~~~~~--------~---~~~~~~~~~l~~l~~~c~~~dp~~R 315 (332)
..+....+.. +.+. ... .+... . .........+.+++.+||+.||++|
T Consensus 350 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R 429 (467)
T PTZ00284 350 NLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKR 429 (467)
T ss_pred hHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhC
Confidence 4333222211 0000 000 00000 0 0000112356799999999999999
Q ss_pred CCHHHHHH
Q 020027 316 PSIVQVAT 323 (332)
Q Consensus 316 Ps~~~i~~ 323 (332)
||++|+++
T Consensus 430 ~ta~e~L~ 437 (467)
T PTZ00284 430 LNARQMTT 437 (467)
T ss_pred CCHHHHhc
Confidence 99999986
No 273
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.4e-39 Score=283.33 Aligned_cols=245 Identities=28% Similarity=0.403 Sum_probs=197.9
Q ss_pred CCCCceeeccCCeEEEEEEeC-C----CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 63 FSHRRIIGQGRLGTVYAALLS-T----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
++..+.||.|+||.||++... + +..||+|.++...... ....+..|+..+..++|+|++++++++...+..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ-QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH-HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 356688999999999999953 3 3889999986553221 334678999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||+++++|.+++....... +++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||++....
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKE--LSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred EeccCCCCHHHHHHhhhhcc--CCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecc
Confidence 99999999999997643211 78999999999999999999999 99999999999999999999999999986554
Q ss_pred cc-------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 218 EE-------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 218 ~~-------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
+. ..++..|++||.... ..++.++|+||+|+++|||++ |..||.+.........+......
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~---~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-------- 223 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKD---GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL-------- 223 (258)
T ss_pred cccccccccCCCcccccChHHhcc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--------
Confidence 32 235678999998854 678899999999999999999 78888765554444444332211
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 020027 290 IPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATIL 325 (332)
Q Consensus 290 ~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L 325 (332)
+.+.....++.+++.+||+.||++|||+.++++.|
T Consensus 224 -~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 -PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11112344788999999999999999999998864
No 274
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.9e-41 Score=302.07 Aligned_cols=250 Identities=20% Similarity=0.288 Sum_probs=200.1
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCCceeE
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 136 (332)
+....|++.+.||.||-+.||++...+.+.+|+|++.....+......|.+|+..|.++ .|.+||+++++-..++.+|+
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 34567999999999999999999988888999998876655555555799999999999 49999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
|||+= ..+|..++++..... ..| .+..+..|++.++.+.|.+ ||||.||||.|+|+- +|.+||+|||+|...
T Consensus 438 vmE~G-d~DL~kiL~k~~~~~--~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKKKSID--PDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAI 509 (677)
T ss_pred Eeecc-cccHHHHHHhccCCC--chH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence 99986 579999998754432 234 6778999999999999999 999999999999995 467999999999765
Q ss_pred Cc--------ccCCcccccCcccccccCCC--------CCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhccc
Q 020027 217 PE--------EKRGLAGYVDDDYWHEKGGG--------NATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRF 280 (332)
Q Consensus 217 ~~--------~~~~~~~~~~pe~~~~~~~~--------~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 280 (332)
.+ +..||..||+||.+...... ..+++|||||+|||||+|+.|+.||+.....+. ++
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a-------Kl 582 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA-------KL 582 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH-------HH
Confidence 43 34799999999998654211 367899999999999999999999987543322 12
Q ss_pred ccccCCcC--CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 281 SELLDPRL--AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 281 ~~~~~~~~--~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..+.+|.- ..+.-.+ ..++.++|..||+.||++|||..++++
T Consensus 583 ~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 583 HAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 22334422 2222111 123889999999999999999999986
No 275
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=9.3e-40 Score=289.11 Aligned_cols=253 Identities=19% Similarity=0.213 Sum_probs=193.4
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|+..+.||.|++|.||+|+. .+|+.||+|.++...........+.+|++++++++||||+++++++...+..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 478889999999999999984 5789999999875543333334578999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+. ++|..++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+|++|||++......
T Consensus 81 ~~-~~l~~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDASPL--SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 688888865432 2378999999999999999999998 9999999999999999999999999998654321
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHH-HHhhhcc--------------
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWAL-PLIKEMR-------------- 279 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~-~~~~~~~-------------- 279 (332)
..++..|++||..... ..++.++||||||+++|||+||+.||.+....... .......
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGC--KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLP 232 (284)
T ss_pred cccccccccccccCCeEEecC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHH
Confidence 1356789999987642 34688999999999999999999999754332211 1111100
Q ss_pred -----cccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 -----FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 -----~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.......... .......++.+++.+||+.||++|||++++++
T Consensus 233 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 233 DYKPSFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHhhcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000000000 00011235678999999999999999999874
No 276
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.1e-39 Score=282.48 Aligned_cols=245 Identities=24% Similarity=0.311 Sum_probs=195.2
Q ss_pred CCCCCceeeccCCeEEEEEEeC-CCCEEEEEEeccCcccc---cccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 62 GFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLS---NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
+|...+.||+|+||.||+|... +++.|++|.+....... .....+.+|+..++.++|+|++++++++...+..+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3677889999999999999954 88999999987543221 1223578899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKKYG----SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 99999999999997643 278889999999999999999998 99999999999999999999999999886543
Q ss_pred c-----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 218 E-----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 218 ~-----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
. ...++..|++||.+... ..++.++|+||||+++||+++|+.||................ . ....+
T Consensus 154 ~~~~~~~~~~~~~y~~pe~~~~~--~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~--~----~~~~~- 224 (258)
T cd06632 154 EFSFAKSFKGSPYWMAPEVIAQQ--GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK--E----LPPIP- 224 (258)
T ss_pred ccccccccCCCcceeCHHHhcCC--CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc--c----CCCcC-
Confidence 2 23467889999988652 237899999999999999999999997654322221111100 0 00111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
......+.+++.+||+.+|++|||+.++++
T Consensus 225 -~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 225 -DHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -CCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 112346778999999999999999999875
No 277
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-40 Score=287.33 Aligned_cols=260 Identities=23% Similarity=0.330 Sum_probs=197.7
Q ss_pred CCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC----CceeE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP----GERII 136 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~~l 136 (332)
.+....+.||+|.||.||+|++ .|+.||||++... ++.+.....||..-..++|+||+.+.+.=..+ ..++|
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred heeEEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 4566678999999999999998 5889999999644 33344345666667788999999998875433 35799
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCC-----CCCeeecCCCCCCEEeCCCCceEEccCC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV-----APNIIHGCIKASNILLNEKFCARVCDYG 211 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~-----~~~ivH~dlk~~Nill~~~~~~kl~dfg 211 (332)
+++|-+.|+|.+|+.... ++....++++..+|+||++||... .|+|.|||||..|||+.+++++-|+|+|
T Consensus 287 vTdYHe~GSL~DyL~r~t-----v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG 361 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNRNT-----VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 361 (513)
T ss_pred eeecccCCcHHHHHhhcc-----CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence 999999999999998643 789999999999999999999643 6789999999999999999999999999
Q ss_pred ccccCC----------cccCCcccccCcccccccCCC---CCCchhhhHHHHHHHHHHHhC----------CCCCCchhH
Q 020027 212 LSFLAP----------EEKRGLAGYVDDDYWHEKGGG---NATRESDVYGFGVVLLEILSG----------RRCEEGLLV 268 (332)
Q Consensus 212 ~a~~~~----------~~~~~~~~~~~pe~~~~~~~~---~~~~~~DiwS~G~il~el~tg----------~~p~~~~~~ 268 (332)
+|.... +...||..|||||.+...... ..-..+||||||.++||++-+ ..||.+..+
T Consensus 362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp 441 (513)
T KOG2052|consen 362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP 441 (513)
T ss_pred eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence 985433 334799999999998753211 123468999999999999852 236643211
Q ss_pred -HHHHHHhhhcccccccCCcCCCCC-ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 269 -KWALPLIKEMRFSELLDPRLAIPC-EIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 269 -~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
+...+.+.+--..+.++|.++... +.+.+..+.++|..||..||..|-|+-.|-..|.++.
T Consensus 442 ~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 442 SDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred CCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 111112222222233444444332 3456778889999999999999999999999988876
No 278
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.5e-40 Score=298.36 Aligned_cols=251 Identities=18% Similarity=0.192 Sum_probs=194.6
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||+++ ..+++.||+|.+....... .....+.+|+.++..++|+||+++++++..++..+++|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 468889999999999999999 4578899999986532211 22224678889999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++|+|.+++..... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 Ey~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKFED---RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999976322 278888999999999999999998 999999999999999999999999999865432
Q ss_pred c-------cCCcccccCcccccccC--CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 219 E-------KRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 219 ~-------~~~~~~~~~pe~~~~~~--~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
. ..|+..|+|||.+.... ...++.++|||||||++|||++|+.||.+....+....+.... .++.
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~------~~~~ 228 (331)
T cd05624 155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE------ERFQ 228 (331)
T ss_pred CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCC------Cccc
Confidence 1 25889999999886421 1357889999999999999999999998765544443332211 1111
Q ss_pred CCCC-hHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 020027 290 IPCE-IKPLVRLAKVALACVGNSRKN--RPSIVQVAT 323 (332)
Q Consensus 290 ~~~~-~~~~~~l~~l~~~c~~~dp~~--RPs~~~i~~ 323 (332)
.+.. .....++.+++.+|+..++++ |++++++++
T Consensus 229 ~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 229 FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 1111 112346778999998865543 457777764
No 279
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.9e-40 Score=289.33 Aligned_cols=256 Identities=23% Similarity=0.280 Sum_probs=198.0
Q ss_pred ChHHHHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeee
Q 020027 52 PLTEIDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQ 129 (332)
Q Consensus 52 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 129 (332)
++.+.....+.|+..+.||+|+||.||+|. ..+++.+|+|.+.... .....+..|+.+++++ +|+|++++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 83 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFI 83 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence 334555566789999999999999999999 4678999999876432 1223467888888888 7999999999885
Q ss_pred c------CCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC
Q 020027 130 A------PGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF 203 (332)
Q Consensus 130 ~------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 203 (332)
. .+..+++|||+++++|.+++...... .+++..++.++.|++.|+.|||++ +++|+|++|+||++++++
T Consensus 84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGN--ALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred cccccCCCCEEEEEEEeCCCCcHHHHHHHccCC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 3 45789999999999999998764322 367888899999999999999998 999999999999999999
Q ss_pred ceEEccCCccccCCc------ccCCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHh
Q 020027 204 CARVCDYGLSFLAPE------EKRGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI 275 (332)
Q Consensus 204 ~~kl~dfg~a~~~~~------~~~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~ 275 (332)
.++|+|||++..... ...++..|++||.+... ....++.++|+|||||++|||+||..||...........+
T Consensus 159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~ 238 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLI 238 (282)
T ss_pred CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhH
Confidence 999999999865432 23467889999987532 1346788999999999999999999999765433222211
Q ss_pred hhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 276 KEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.... .+.. ........+.+++.+||+.||.+|||+.|+++
T Consensus 239 ~~~~-----~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 239 PRNP-----PPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hhCC-----CCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 1110 0111 11122347889999999999999999999874
No 280
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.6e-39 Score=287.72 Aligned_cols=253 Identities=20% Similarity=0.250 Sum_probs=197.8
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|+..+.||+|+||.||+|.. .+|+.||+|.+............+.+|+.+++.++|||++++++++..++..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 477889999999999999994 5789999999876543333344678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+ +++|.+++.... ..+++.++..++.|+++||.|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 81 ~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 999999986543 2388999999999999999999998 9999999999999999999999999998764332
Q ss_pred ------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------c-------
Q 020027 220 ------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-------R------- 279 (332)
Q Consensus 220 ------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-------~------- 279 (332)
..++..|++||.+... ..++.++||||+|+++|||+||.+||.+.........+... .
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGA--RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSL 231 (286)
T ss_pred CCccccccCcccccCceeeecc--ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCc
Confidence 2467889999987642 45689999999999999999998888765433322221110 0
Q ss_pred --cccccCCcCC-C---CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 --FSELLDPRLA-I---PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 --~~~~~~~~~~-~---~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.....+... . ....+....+.+++.+||+.||++|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000000 0 000122357889999999999999999999875
No 281
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.2e-40 Score=302.43 Aligned_cols=247 Identities=20% Similarity=0.213 Sum_probs=190.6
Q ss_pred cCCCCCCceeeccCCeEEEEEEe---CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL---STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 136 (332)
..+|...+.||+|+||.||++.. .++..||+|.+... ....+|+.+++.++||||+++++++...+..++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 45799999999999999999973 34678999987532 134689999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
+||++. ++|.+++.... .+++..++.++.|++.||.|||++ +|+||||||+|||++.++.++|+|||++...
T Consensus 164 v~e~~~-~~l~~~l~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 164 VMPKYK-CDLFTYVDRSG----PLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EehhcC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 999995 68888884332 288999999999999999999998 9999999999999999999999999998654
Q ss_pred Ccc--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHH---HHHHHhhh----cc--
Q 020027 217 PEE--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVK---WALPLIKE----MR-- 279 (332)
Q Consensus 217 ~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~---~~~~~~~~----~~-- 279 (332)
... ..||..|+|||.+.. ..++.++|||||||++|||++|+.||.+.... ..+..+.. ..
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~ 312 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLAL---DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLE 312 (392)
T ss_pred CcccccccccccccccCccCHhHhcC---CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccc
Confidence 321 257899999999876 67889999999999999999999998654211 11111100 00
Q ss_pred ---------------cccccCCcCCCCCC---hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 280 ---------------FSELLDPRLAIPCE---IKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 280 ---------------~~~~~~~~~~~~~~---~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
+.....+....+.. ......+.+++.+||..||++|||+.|+++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 313 FPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000111111100 0113367789999999999999999999863
No 282
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5.3e-40 Score=292.12 Aligned_cols=241 Identities=21% Similarity=0.237 Sum_probs=192.8
Q ss_pred CCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccC
Q 020027 64 SHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFIN 142 (332)
Q Consensus 64 ~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 142 (332)
.....||+|+||.||++.. .++..||+|.+..... .....+.+|+..++.++|+|++++++.+...+..+++|||++
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ--QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH--HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 3345699999999999984 5788999999864332 222346889999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc---
Q 020027 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE--- 219 (332)
Q Consensus 143 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~--- 219 (332)
+++|.+++... .+++..+..++.|++.||.|||++ +++||||||+||++++++.++|+|||++......
T Consensus 103 ~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~ 174 (292)
T cd06658 103 GGALTDIVTHT-----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK 174 (292)
T ss_pred CCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc
Confidence 99999988542 278889999999999999999998 9999999999999999999999999998643221
Q ss_pred ---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHH
Q 020027 220 ---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKP 296 (332)
Q Consensus 220 ---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (332)
..++..|+|||.... ..++.++|+||||+++||+++|+.||.+.........+... ..+.... ....
T Consensus 175 ~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~ 244 (292)
T cd06658 175 RKSLVGTPYWMAPEVISR---LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN-----LPPRVKD--SHKV 244 (292)
T ss_pred CceeecCccccCHHHHcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-----CCCcccc--cccc
Confidence 246788999998865 56789999999999999999999999875544333322221 1111111 1112
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 297 LVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 297 ~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
...+.+++.+||..||.+|||+.++++.
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 3367789999999999999999999864
No 283
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-39 Score=302.66 Aligned_cols=246 Identities=19% Similarity=0.213 Sum_probs=188.1
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.+|...+.||+|+||.||++.. .+++.||+|.... ..+.+|+.++++++|+||+++++++...+..+++||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 4688889999999999999994 5688999995321 235789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE- 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~- 218 (332)
++. ++|..++..... .+++.+++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 241 ~~~-~~L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 241 KYR-SDLYTYLGARLR---PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred ccC-CCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 995 688888765322 389999999999999999999998 999999999999999999999999999875432
Q ss_pred -------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCch--------hHHHHHHHhhhcccc--
Q 020027 219 -------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGL--------LVKWALPLIKEMRFS-- 281 (332)
Q Consensus 219 -------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~--------~~~~~~~~~~~~~~~-- 281 (332)
...||..|++||++.. ..++.++|||||||++|||++|..++... ........+......
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~---~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~ 390 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAG---DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVD 390 (461)
T ss_pred cccccccccCCCcCCcCHHHHcC---CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccc
Confidence 1248899999999876 67899999999999999999977543211 111122222211110
Q ss_pred ---cc----------------cCCcCCCCCC---hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 282 ---EL----------------LDPRLAIPCE---IKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 282 ---~~----------------~~~~~~~~~~---~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
.. ..+....+.. ......+.+++.+||+.||.+|||+.|+++.
T Consensus 391 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 391 EFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 0000000000 0112257789999999999999999999863
No 284
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-39 Score=289.23 Aligned_cols=253 Identities=24% Similarity=0.245 Sum_probs=195.7
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec--CCceeEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA--PGERIIV 137 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv 137 (332)
++|...+.||.|++|.||++.. .+++.+|+|.+...... .....+.+|+++++.++||||+++++++.. .+..+++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 4678889999999999999995 57889999998754322 223457899999999999999999998854 3468999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||+++++|.+++.........+++.....++.|++.||.|||+. +++|+||+|+||++++++.++++|||++....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 999999999988765332233478889999999999999999998 99999999999999999999999999986543
Q ss_pred cc----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH-----HHHHHHhhhcccccccCCcC
Q 020027 218 EE----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV-----KWALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 218 ~~----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 288 (332)
.. ..++..|++||.... ..++.++||||+||++|||++|+.||..... .+....+........ ...
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 231 (287)
T cd06621 157 NSLAGTFTGTSFYMAPERIQG---KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPEL-KDE- 231 (287)
T ss_pred ccccccccCCccccCHHHhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhh-ccC-
Confidence 22 246778999998865 6788999999999999999999999875421 111121111111000 000
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..........+.+++.+||+.||++|||+.|+++
T Consensus 232 -~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 232 -PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred -CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1111122447889999999999999999999986
No 285
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4e-39 Score=289.74 Aligned_cols=250 Identities=24% Similarity=0.258 Sum_probs=197.9
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.|...+.||+|+||.||+++ ..++..+|+|.+....... .....+.+|+..++.++|+|++++++++..++..+++||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 37788899999999999999 4578999999987543222 222357889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+++ ++.+.+..... .+++..+..++.|++.|+.|||++ +++|+||+|+||+++.++.++++|||++......
T Consensus 106 ~~~g-~l~~~~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 106 YCLG-SASDLLEVHKK---PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred CCCC-CHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 9974 77776654322 278999999999999999999998 9999999999999999999999999998655432
Q ss_pred --cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 220 --KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 220 --~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
..++..|++||.+.......++.++|+|||||++|||++|+.||.+.........+..... .........
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 250 (317)
T cd06635 179 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--------PTLQSNEWS 250 (317)
T ss_pred ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccC--------CCCCCcccc
Confidence 3577889999998543335688999999999999999999999876544333333322111 011111223
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 298 VRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
..+.+++.+||+.+|.+|||+.++++.+-
T Consensus 251 ~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 251 DYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 46789999999999999999999998543
No 286
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.3e-39 Score=289.23 Aligned_cols=242 Identities=18% Similarity=0.211 Sum_probs=197.4
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||++. ..+++.+|+|.+....... .....+.+|++++++++||||+++++++...+..+++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 468888999999999999999 4578999999986543222 22235788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++..... +++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~~~----l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRKSGR----FPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 99999999999876532 78899999999999999999998 999999999999999999999999999876543
Q ss_pred c---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 219 E---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 219 ~---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
. ..++..|++||.+.. ...+.++|+||||+++|||++|+.||...........+..+ ....+...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~- 221 (290)
T cd05580 154 RTYTLCGTPEYLAPEIILS---KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG--------KVRFPSFF- 221 (290)
T ss_pred CCCCCCCCccccChhhhcC---CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--------CccCCccC-
Confidence 3 246788999998865 56788999999999999999999999766544333333222 11122222
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHH
Q 020027 296 PLVRLAKVALACVGNSRKNRP-----SIVQVA 322 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RP-----s~~~i~ 322 (332)
...+.+++.+||+.||++|| +++|++
T Consensus 222 -~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 222 -SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred -CHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 34778999999999999999 666665
No 287
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=9.1e-40 Score=291.29 Aligned_cols=241 Identities=19% Similarity=0.226 Sum_probs=193.6
Q ss_pred CCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEecc
Q 020027 63 FSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 141 (332)
|+....||+|+||.||++.. .+++.||+|.+...... ....+.+|+..++.++|||++++++++..++..++++||+
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence 33445799999999999984 57899999998654322 2234678999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc--
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE-- 219 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~-- 219 (332)
++++|..++... .+++..++.++.|++.||.|||++ +++|+||+|+||+++.++.+||+|||++......
T Consensus 101 ~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~ 172 (297)
T cd06659 101 QGGALTDIVSQT-----RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 172 (297)
T ss_pred CCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence 999999887542 278999999999999999999998 9999999999999999999999999998643321
Q ss_pred ----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 220 ----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 220 ----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
..++..|++||.+.. ..++.++|||||||++|||++|+.||...........+.... .+.... ...
T Consensus 173 ~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~--~~~ 242 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISR---TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP-----PPKLKN--AHK 242 (297)
T ss_pred cccceecCccccCHHHHcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccC-----CCCccc--cCC
Confidence 246788999999865 568899999999999999999999997655444433332211 011111 111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 296 PLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
....+.+++.+||+.+|++|||++++++
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 2236778999999999999999999987
No 288
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=9.5e-40 Score=289.44 Aligned_cols=254 Identities=22% Similarity=0.259 Sum_probs=196.0
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|+..+.||+|+||.||+|.. .+++.||+|.++...........+.+|+++++.++|+||+++++++..++..++++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 3688889999999999999994 478899999987654433334467899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|++++++..+..... .+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 81 YVERTLLELLEASPG----GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred cCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 999877776664432 278899999999999999999998 9999999999999999999999999998764432
Q ss_pred -------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh--cccc----cc--c
Q 020027 220 -------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE--MRFS----EL--L 284 (332)
Q Consensus 220 -------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~--~~~~----~~--~ 284 (332)
..++..|++||..... ..++.++|+||||+++|||++|+.||.+....+....... +... .. .
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGD--TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSS 231 (288)
T ss_pred ccccccCcccccCCcCCchhcCC--CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhccc
Confidence 2356779999998762 2778999999999999999999999875432221111110 0000 00 0
Q ss_pred CCc-----CCC---------CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 285 DPR-----LAI---------PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 285 ~~~-----~~~---------~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
++. ... ..+.....++.+++.+||+.||++|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 232 NPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000 000 001112457889999999999999999999875
No 289
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.3e-39 Score=285.91 Aligned_cols=254 Identities=22% Similarity=0.286 Sum_probs=193.0
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|+..+.||+|++|.||+|.. .+++.||+|.+...... .....+.+|+.+++.++|+||+++++++...+..+++|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 35788899999999999999994 47899999998754322 22234678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||++ ++|.+++..... .+++..+..++.|+++||.|||+. +++||||||+||+++.++.+|++|||+++....
T Consensus 83 e~~~-~~L~~~~~~~~~---~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 155 (291)
T cd07844 83 EYLD-TDLKQYMDDCGG---GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSV 155 (291)
T ss_pred ecCC-CCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence 9997 489988865432 378899999999999999999998 999999999999999999999999999865321
Q ss_pred ------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh-HHHHHHHhhh-------ccccccc
Q 020027 219 ------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL-VKWALPLIKE-------MRFSELL 284 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~-~~~~~~~~~~-------~~~~~~~ 284 (332)
...++..|++||.+... ..++.++||||+|+++|||++|+.||.+.. .......+.+ ..+....
T Consensus 156 ~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 156 PSKTYSNEVVTLWYRPPDVLLGS--TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred CCccccccccccccCCcHHhhcC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhh
Confidence 12356789999987642 457889999999999999999999996543 1111111100 0000000
Q ss_pred ------CCcCCC--C-------CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 285 ------DPRLAI--P-------CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 285 ------~~~~~~--~-------~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...... + ........+.+++.+|++.||++|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000 0 00111146779999999999999999999875
No 290
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.7e-39 Score=283.19 Aligned_cols=251 Identities=24% Similarity=0.312 Sum_probs=199.3
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|+..+.||.|+||.||+|. ..++..+++|.+....... ....+.+|+..++.++|+|++++++.+...+..++++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 468889999999999999999 4578899999986543322 33457899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
++++++|.+++..... ...+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.++++|||++......
T Consensus 80 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 80 YLSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred ccCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 9999999999975422 12378999999999999999999998 9999999999999999999999999987543321
Q ss_pred ----------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 220 ----------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 220 ----------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
..++..|++||..... ..++.++|+||||+++|||++|+.||................ .+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~--~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~ 228 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQV--HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND-----PPSLE 228 (267)
T ss_pred ccccccccccccCChhhcChHHHccc--cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC-----CCCcC
Confidence 1367789999988763 367899999999999999999999997654332222211111 11111
Q ss_pred CCCC-hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 290 IPCE-IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 290 ~~~~-~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.... ......+.+++.+||+.||++|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 229 TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1111 123346789999999999999999999875
No 291
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.1e-39 Score=284.17 Aligned_cols=242 Identities=24% Similarity=0.292 Sum_probs=196.0
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
-|+..+.||+|+||.||+|. ..+++.+|+|........ .....+.+|+..++.++|||++++++++..++..+++|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 36677899999999999998 457889999987643321 2223578899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||++......
T Consensus 84 ~~~~~l~~~i~~~-----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 84 LGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 9999999998643 278999999999999999999998 9999999999999999999999999998654332
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|++||.... ...+.++|+|||||++||+++|..||...........+..... +.+ +.
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~---~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~----~~ 223 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQ---SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNP-----PTL----EG 223 (277)
T ss_pred hhhccccCCccccChhhhcc---CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCC-----CCC----Cc
Confidence 246778999998865 5678899999999999999999999976544333332222111 111 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
.....+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 122367789999999999999999999983
No 292
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.8e-39 Score=291.76 Aligned_cols=190 Identities=19% Similarity=0.243 Sum_probs=154.3
Q ss_pred CceeeccCCeEEEEEEeC---CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeee--cCCceeEEEec
Q 020027 66 RRIIGQGRLGTVYAALLS---TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQ--APGERIIVSEF 140 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~ 140 (332)
.+.||+|+||.||+|+.. ++..||+|.+.... ....+.+|+.+++.++||||+++++++. .+...++++||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 357999999999999853 45789999886432 2234688999999999999999999884 35678999999
Q ss_pred cCCCCHHHHhcccC-----CCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEe----CCCCceEEccCC
Q 020027 141 INMASLDFYLHENN-----DGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILL----NEKFCARVCDYG 211 (332)
Q Consensus 141 ~~~~~L~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~~~~kl~dfg 211 (332)
++ ++|.+++.... .....+++..+..++.|++.||.|||+. +++||||||+||++ +.++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 96 57777764321 1122478889999999999999999998 99999999999999 466799999999
Q ss_pred ccccCCcc---------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCc
Q 020027 212 LSFLAPEE---------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265 (332)
Q Consensus 212 ~a~~~~~~---------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~ 265 (332)
+++..... ..++..|+|||.+... ..++.++|||||||++|||+||+.||..
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ceeccCCCcccccccCcceecccccCcHHhcCC--CccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 98754321 2467889999988652 4578999999999999999999999864
No 293
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.2e-39 Score=288.25 Aligned_cols=257 Identities=18% Similarity=0.198 Sum_probs=192.8
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeeeeecCCc-----
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGFSQAPGE----- 133 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~----- 133 (332)
++|+..+.||+|+||.||+|. ..+++.||+|.++...........+.+|+.+++.++ |+|++++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 468889999999999999999 457899999998765433333345788999999995 6999999999876655
Q ss_pred eeEEEeccCCCCHHHHhcccCCC-CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC-CCceEEccCC
Q 020027 134 RIIVSEFINMASLDFYLHENNDG-ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE-KFCARVCDYG 211 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~dfg 211 (332)
.+++|||+++ ++.+++...... ...+++..++.++.||+.||.|||++ +++||||+|+||+++. ++.+|++|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 788887654322 23479999999999999999999998 9999999999999998 8999999999
Q ss_pred ccccCCcc------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHH-HHhhhcc--ccc
Q 020027 212 LSFLAPEE------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWAL-PLIKEMR--FSE 282 (332)
Q Consensus 212 ~a~~~~~~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~-~~~~~~~--~~~ 282 (332)
++...... ..++..|++||..... ..++.++|+||||+++|||++|..||.+....... ....... ..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
T cd07837 157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGS--THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQ 234 (295)
T ss_pred cceecCCCccccCCcccccCCCChHHhhCC--CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 98643221 2356779999987542 45789999999999999999999999765332221 1111000 000
Q ss_pred ccC-----------CcCCC----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 283 LLD-----------PRLAI----PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 283 ~~~-----------~~~~~----~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
... +.... ........++.+++.+||+.||.+|||+.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 00000 000112346789999999999999999999875
No 294
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-40 Score=293.46 Aligned_cols=245 Identities=18% Similarity=0.262 Sum_probs=212.0
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.-|+..+.||+|.|..|-.++ .-+|+.||||++.+...+.-....+.+|+..|+.++|||||++|++...+..+||+.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 347778999999999999998 5699999999999877666555568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC-CCceEEccCCccccCCc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE-KFCARVCDYGLSFLAPE 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~dfg~a~~~~~ 218 (332)
+=++|+|.+||-.+..+ +.+....+++.||..|+.|+|.. .+|||||||+|+.+.+ -|.+|+.|||++-....
T Consensus 98 LGD~GDl~DyImKHe~G---l~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEG---LNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred ecCCchHHHHHHhhhcc---ccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 99999999999877554 78899999999999999999998 8999999999998864 68899999999865433
Q ss_pred -----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCC
Q 020027 219 -----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 219 -----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
..+|...|-|||.+.+. ....+++||||+|||||-|++|+.||+...+.+.+.++.+.++ ..+
T Consensus 172 G~kL~TsCGSLAYSAPEILLGD--sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY----------tvP 239 (864)
T KOG4717|consen 172 GKKLTTSCGSLAYSAPEILLGD--SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY----------TVP 239 (864)
T ss_pred cchhhcccchhhccCchhhhcC--ccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc----------cCc
Confidence 34788899999999874 4456899999999999999999999999888888877776542 223
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 294 IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.-...++.+||..++..||++|-|.++|+.
T Consensus 240 shvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 240 SHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 344557889999999999999999999875
No 295
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.3e-39 Score=285.41 Aligned_cols=253 Identities=20% Similarity=0.232 Sum_probs=193.5
Q ss_pred CCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEecc
Q 020027 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 141 (332)
|+..+.||.|++|.||+|. ..+|..||+|.+............+.+|+..++.++|||++++++++..++..++++||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 5677899999999999998 458999999998765433333345788999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc---
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE--- 218 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~--- 218 (332)
+ ++|.+++..... ..+++..++.++.|+++||.|||++ +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 5 689988875432 2378999999999999999999998 999999999999999999999999999865431
Q ss_pred ---ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHH-HHhhhcc---------cccccC
Q 020027 219 ---EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWAL-PLIKEMR---------FSELLD 285 (332)
Q Consensus 219 ---~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~-~~~~~~~---------~~~~~~ 285 (332)
...++..|++||..... ..++.++|+||||+++|||+||+.||.+....... ....... .....+
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGS--RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred ccCccccccCCCCCceeecC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchh
Confidence 12346789999987542 45688999999999999999999999754332211 1111000 000000
Q ss_pred -----CcCC----CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 286 -----PRLA----IPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 286 -----~~~~----~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+... ..........+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 0001112246779999999999999999999875
No 296
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.9e-39 Score=288.65 Aligned_cols=245 Identities=23% Similarity=0.277 Sum_probs=196.7
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|...+.||+|+||.||++. ..++..||+|.+..... .....+.+|+.+++.++|||++++++.+...+..++++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 4678899999999999999998 45788999999864322 22235688999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+++++|.+++.+.. +++..+..++.|++.|+.|||++ +++|+||+|+||+++.++.++|+|||++.....
T Consensus 96 e~~~~~~L~~~~~~~~-----l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~ 167 (293)
T cd06647 96 EYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (293)
T ss_pred ecCCCCcHHHHHhhcC-----CCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence 9999999999986532 67888999999999999999999 999999999999999999999999998754332
Q ss_pred c------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 219 E------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
. ..++..|++||.... ..++.++|+||||+++||+++|+.||...........+... .......
T Consensus 168 ~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~-------~~~~~~~ 237 (293)
T cd06647 168 EQSKRSTMVGTPYWMAPEVVTR---KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-------GTPELQN 237 (293)
T ss_pred cccccccccCChhhcCchhhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC-------CCCCCCC
Confidence 2 246677999998865 56789999999999999999999999765433221111110 1111111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
+......+.+++.+||+.+|++||++.+++..
T Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 238 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 12223467799999999999999999999864
No 297
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.2e-39 Score=282.04 Aligned_cols=247 Identities=21% Similarity=0.284 Sum_probs=203.3
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|+..+.||+|+||.||++. ..+++.+++|.+............+.+|+..++.++|+||+++++++...+..++++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 47788899999999999998 55889999999876544344444678899999999999999999999988999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++.........+++..+..++.|++.|+.|||+. +++|+||+|.||++++++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 999999999876433233478999999999999999999998 9999999999999999999999999998665432
Q ss_pred ---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHH
Q 020027 220 ---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKP 296 (332)
Q Consensus 220 ---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (332)
..++..|++||.+.. ..++.++|+||||+++||+++|+.||...........+...... +.+...
T Consensus 158 ~~~~~~~~~~~~Pe~~~~---~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------~~~~~~ 225 (256)
T cd08530 158 AKTQIGTPHYMAPEVWKG---RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP---------PIPPIY 225 (256)
T ss_pred cccccCCccccCHHHHCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---------CCchhh
Confidence 346788999999876 67788999999999999999999999876554443333322211 111233
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 297 LVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 297 ~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...+.+++.+||+.+|++|||+.++++
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 226 SQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 457889999999999999999999875
No 298
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.3e-39 Score=284.51 Aligned_cols=243 Identities=23% Similarity=0.321 Sum_probs=194.2
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC---CCCccceeeeeecCCceeEE
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ---HPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv 137 (332)
.|+..+.||+|+||.||+|. ..+++.+|+|.++.... ......+.+|+.+++.++ |||++++++++...+..+++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP-DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC-chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 47788899999999999999 46889999999875432 222235678888888886 99999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||+++++|.+++... .+++..++.++.|++.|+.|||+. +++|+||+|+||++++++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 81 MEYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 9999999999998643 278999999999999999999998 99999999999999999999999999886543
Q ss_pred cc------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 218 EE------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 218 ~~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
.. ..++..|++||.... +..++.++|+||||+++|+|++|..||.+.........+.... .+.+..
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~- 224 (277)
T cd06917 153 QNSSKRSTFVGTPYWMAPEVITE--GKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK-----PPRLED- 224 (277)
T ss_pred CCccccccccCCcceeCHHHhcc--CCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC-----CCCCCc-
Confidence 22 246778999998754 2456889999999999999999999997654332221111110 011111
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....++.+++.+||+.||++|||+.++++
T Consensus 225 --~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 225 --NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred --ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 012346889999999999999999999975
No 299
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.5e-39 Score=283.79 Aligned_cols=247 Identities=21% Similarity=0.309 Sum_probs=194.3
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc----ccccHHHHHHHhccCCCCCccceeeeeecCCceeE
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN----AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 136 (332)
+|+..+.||+|+||.||+|. ..+++.+|+|.+........ ....+.+|+..+++++|+|++++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 47788999999999999998 57889999999875432211 12357889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC-ceEEccCCcccc
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF-CARVCDYGLSFL 215 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~dfg~a~~ 215 (332)
++||+++++|.+++.... .+++.....++.|++.|+.|||++ +++|+||+|+||+++.++ .+||+|||.+..
T Consensus 81 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG----AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 999999999999987543 278899999999999999999998 999999999999998765 699999999865
Q ss_pred CCcc----------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccC
Q 020027 216 APEE----------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 216 ~~~~----------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
.... ..++..|++||.+.. ..++.++|+||+|+++||+++|..||...........+.... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----~ 225 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRG---EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIA-----S 225 (268)
T ss_pred cccccccCCccccccccccceeCHhHhcc---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh-----c
Confidence 4321 235678999998865 567899999999999999999999986432211111111100 0
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.......+.....++.+++.+||+.||++|||+.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 226 ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 00111112223347889999999999999999999874
No 300
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5.2e-39 Score=285.46 Aligned_cols=254 Identities=20% Similarity=0.226 Sum_probs=191.3
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
+++|...+.||+|+||.||+|. ..+|+.||+|.+..... ......+.+|+..++.++|+||+++++++..++..++++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4678999999999999999998 45789999999865432 222335678999999999999999999999999999999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||+. +++.+++..... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||+++....
T Consensus 83 e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQHPG---GLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 677666654322 267888889999999999999998 999999999999999999999999999865322
Q ss_pred ------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHH-HHHHHhhh--c-----------
Q 020027 219 ------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVK-WALPLIKE--M----------- 278 (332)
Q Consensus 219 ------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~-~~~~~~~~--~----------- 278 (332)
...++..|++||.+... ..++.++||||||+++|||+||+.||.+.... +....+.. +
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 156 PSQTYSSEVVTLWYRPPDVLLGA--TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCCCCCCccccccccCCceeecC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 12467889999987642 45788999999999999999999999754321 11111100 0
Q ss_pred ---ccc-cccCCcCCC-----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 279 ---RFS-ELLDPRLAI-----PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 279 ---~~~-~~~~~~~~~-----~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+. ......... .........+.+++.+|++.||++|||+.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000 000000000 000111346778999999999999999999864
No 301
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1e-39 Score=284.86 Aligned_cols=241 Identities=20% Similarity=0.225 Sum_probs=196.4
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
+|+..+.||.|+||.||+|.. .+++.||+|.+....... .....+.+|+..+++++||||+++++.+..++..++++|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 477889999999999999995 478999999997544322 233467899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+++++|.+++.... .+++..+..++.|+++||.|||++ +++|+||+|+||++++++.++++|||.+......
T Consensus 81 ~~~~~~L~~~l~~~~----~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQKV----KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 999999999997652 278899999999999999999998 9999999999999999999999999998765433
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH---HHHHHHhhhcccccccCCcCCCC
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV---KWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
..++..|++||.... ..++.++|+||||+++|++++|..||..... .+....... .....
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~- 221 (258)
T cd05578 154 TLTTSTSGTPGYMAPEVLCR---QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--------ADVLY- 221 (258)
T ss_pred ccccccCCChhhcCHHHHcc---cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--------ccccC-
Confidence 356788999998876 4578999999999999999999999986542 222211111 01111
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCH--HHHH
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSI--VQVA 322 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~--~~i~ 322 (332)
+......+.+++.+||+.||++||++ +|++
T Consensus 222 -~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 222 -PATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -cccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 11223578899999999999999999 5554
No 302
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.3e-39 Score=287.91 Aligned_cols=256 Identities=22% Similarity=0.266 Sum_probs=196.1
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC--Ccee
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GERI 135 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 135 (332)
..++|+..+.||+|+||.||+|. ..+|+.||+|.++.............+|+.++++++|+|++++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 45689999999999999999999 45799999999875543333233457899999999999999999998655 5689
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++|||+. ++|.+++.... ..+++..+..++.|++.|+.|||+. +++||||||+||++++++.+||+|||++..
T Consensus 85 lv~e~~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 85 LVMEYCE-QDLASLLDNMP---TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred EEEecCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeee
Confidence 9999996 47888876532 2378999999999999999999999 999999999999999999999999999876
Q ss_pred CCcc------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcc---cccc---
Q 020027 216 APEE------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMR---FSEL--- 283 (332)
Q Consensus 216 ~~~~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~---~~~~--- 283 (332)
.... ..++..|++||..... ..++.++||||+||++|||++|+.||.+.........+.... ....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07845 158 YGLPAKPMTPKVVTLWYRAPELLLGC--TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPG 235 (309)
T ss_pred cCCccCCCCcccccccccChhhhcCC--CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchh
Confidence 4422 1245679999987642 457889999999999999999999998765554443332210 0000
Q ss_pred cC-----CcCCCC---C-C-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 284 LD-----PRLAIP---C-E-----IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 284 ~~-----~~~~~~---~-~-----~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+ .....+ . . ......+.+++.+||+.||++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 000000 0 0 011345678999999999999999999875
No 303
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.3e-39 Score=287.35 Aligned_cols=257 Identities=23% Similarity=0.222 Sum_probs=194.6
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC----
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG---- 132 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 132 (332)
...++|+..+.||+|+||.||+|.. .+|+.||+|.++...........+.+|+.+++.++|||++++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 4567899999999999999999995 57899999999765433333335678999999999999999999886654
Q ss_pred ------ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceE
Q 020027 133 ------ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCAR 206 (332)
Q Consensus 133 ------~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 206 (332)
..++++||+++ ++..++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL---VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999976 6666665432 2378999999999999999999998 999999999999999999999
Q ss_pred EccCCccccCCcc-------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcc
Q 020027 207 VCDYGLSFLAPEE-------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMR 279 (332)
Q Consensus 207 l~dfg~a~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~ 279 (332)
|+|||.+...... ..++..|++||.+... ..++.++|||||||++|||++|+.||...........+....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~ 234 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGE--ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLC 234 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 9999998754322 1346679999987542 356889999999999999999999997654333322222110
Q ss_pred -------ccccc--------CCcCCC-----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 -------FSELL--------DPRLAI-----PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 -------~~~~~--------~~~~~~-----~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.... +..... ......+..+.+++.+||+.||.+|||+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 000000 000012347889999999999999999999875
No 304
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.5e-39 Score=284.77 Aligned_cols=245 Identities=26% Similarity=0.342 Sum_probs=196.6
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|+..+.||+|+||.||++.. .+++.+|+|.+...... .....+.+|+..++.++||||+++++.+..++..++++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 3677888999999999999995 47899999998765432 233457889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhc-CCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ-GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
|+++++|.+++.... ..+++.....++.|++.|+.|||+ . +++|+||+|+||++++++.++++|||.+.....
T Consensus 80 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 80 YMDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred ecCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 999999999997643 237888999999999999999999 7 999999999999999999999999999865432
Q ss_pred ----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh-----HHHHHHHhhhcccccccCCcCC
Q 020027 219 ----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL-----VKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 219 ----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
...++..|++||.+.. ..++.++|+||||+++|++++|+.||.... ..+....+... ....
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~---~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~ 223 (265)
T cd06605 154 SLAKTFVGTSSYMAPERIQG---NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-------PPPR 223 (265)
T ss_pred HHhhcccCChhccCHHHHcC---CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-------CCCC
Confidence 1357788999999876 578899999999999999999999986531 11111111111 0111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 290 IPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 290 ~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+.. .....+.+++.+||..||++|||+.+++.
T Consensus 224 ~~~~-~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 224 LPSG-KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CChh-hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 1111 13346789999999999999999999875
No 305
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.1e-39 Score=280.05 Aligned_cols=244 Identities=26% Similarity=0.315 Sum_probs=198.8
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|+..+.||+|++|.||++.. .+++.|++|.+...... .....+.+|+..+..++|+|++++++++..++..++++|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 4688889999999999999995 46999999998765432 233457899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhc-CCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ-GVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
|+++++|.+++.... .+++..++.++.|+++|+.|||+ . +++|+||+|+||+++.++.++++|||.+.....
T Consensus 80 ~~~~~~L~~~l~~~~----~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 80 YMDGGSLADLLKKVG----KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred ecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 999999999997642 27899999999999999999999 8 999999999999999999999999999875533
Q ss_pred c------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh---HHHHHHHhhhcccccccCCcCC
Q 020027 219 E------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL---VKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
. ..++..|++||.+.. ..++.++|+||||+++||++||+.||.... .......+.... .+
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~---~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-----~~--- 221 (264)
T cd06623 153 TLDQCNTFVGTVTYMSPERIQG---ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGP-----PP--- 221 (264)
T ss_pred CCCcccceeecccccCHhhhCC---CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCC-----CC---
Confidence 2 245678999998876 578899999999999999999999997653 111111111110 01
Q ss_pred CCCChH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 290 IPCEIK-PLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 290 ~~~~~~-~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
..+.. ....+.+++.+||+.+|++|||+.++++.
T Consensus 222 -~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 -SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11111 23478899999999999999999999863
No 306
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.7e-39 Score=288.04 Aligned_cols=256 Identities=22% Similarity=0.295 Sum_probs=191.3
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 138 (332)
++|...+.||+|+||.||++. ..+++.+|+|.+...... .....+.+|+..+.++. |+||+++++++..++..+++|
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 356667889999999999999 567899999998754332 22335788999998886 999999999999899999999
Q ss_pred eccCCCCHHHHhccc-CCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 139 EFINMASLDFYLHEN-NDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 139 e~~~~~~L~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
||+. +++.++.... ......+++..+..++.|++.||+|||+.. +++||||||+||+++.++.+||+|||++....
T Consensus 83 e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 83 ELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred eccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 9986 4555443211 011123789999999999999999999631 89999999999999999999999999986543
Q ss_pred c-----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 218 E-----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 218 ~-----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
. ...++..|++||.+.......++.++|||||||++||+++|+.||..... ....+.... ....+.+....
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~--~~~~~~~~~~~ 235 (288)
T cd06616 160 DSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVV--KGDPPILSNSE 235 (288)
T ss_pred cCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhc--CCCCCcCCCcC
Confidence 2 22567889999998753223688999999999999999999999975431 111111100 00011121122
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
......++.+++.+||+.||++|||+.++++.
T Consensus 236 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 236 EREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 12344578899999999999999999998863
No 307
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-41 Score=326.17 Aligned_cols=248 Identities=25% Similarity=0.307 Sum_probs=205.7
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+......||.|.||.||.|. ..+|+..|+|.++-............+|.+++..++|||+|+++|+-.+....+|.|||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence 45556789999999999998 78999999999986655544445688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK 220 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~ 220 (332)
|++|+|.+.+...+. .++.-...+..|++.|++|||++ ||||||+||.||+++.+|.+|.+|||.|....+..
T Consensus 1316 C~~GsLa~ll~~gri----~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHGRI----EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred hccCcHHHHHHhcch----hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 999999998865432 45555566789999999999999 99999999999999999999999999997654432
Q ss_pred ----------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 221 ----------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 221 ----------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
.||+-|||||.+....+.....++||||+||++.||+||++||.....+|+.-+..... ..+..
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~g------h~Pq~ 1462 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAG------HKPQI 1462 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhcc------CCCCC
Confidence 59999999999988766667789999999999999999999999888777654333321 11112
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
| .....+-.+++.+|++.||++|.++.|+++.
T Consensus 1463 P--~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1463 P--ERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred c--hhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 2 2233356689999999999999999988764
No 308
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.9e-39 Score=290.02 Aligned_cols=250 Identities=22% Similarity=0.232 Sum_probs=189.5
Q ss_pred eeecc--CCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCC
Q 020027 68 IIGQG--RLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMA 144 (332)
Q Consensus 68 ~lg~G--~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 144 (332)
.||+| +||+||++. ..+|+.||+|.+............+.+|+.+++.++||||+++++++..++..++++||++++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 999999999 468999999998765433333345788899999999999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc------
Q 020027 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE------ 218 (332)
Q Consensus 145 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~------ 218 (332)
++.+++...... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.++++||+.+.....
T Consensus 85 ~l~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 85 SANSLLKTYFPE--GMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CHHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 999998764322 378888999999999999999998 999999999999999999999999975422111
Q ss_pred -------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccc----------
Q 020027 219 -------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFS---------- 281 (332)
Q Consensus 219 -------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---------- 281 (332)
...++..|++||.+... ...++.++|||||||++|||++|+.||.+................
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQD-LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred ccccccccccCccCccChhhhcCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 01234569999998642 134688999999999999999999999765433222111110000
Q ss_pred ---------------------------cccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 282 ---------------------------ELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 282 ---------------------------~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.........+........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000111112222334567889999999999999999999974
No 309
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=6.2e-39 Score=292.78 Aligned_cols=252 Identities=21% Similarity=0.218 Sum_probs=192.2
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC------
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP------ 131 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 131 (332)
..++|+..+.||+|+||.||+|. ..+|+.||+|.+............+.+|+.+++.++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 35679999999999999999999 56899999999865433333333567899999999999999999987543
Q ss_pred CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCC
Q 020027 132 GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211 (332)
Q Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg 211 (332)
...+++|||+. ++|.+.+... ++...+..++.|++.||.|||++ +++||||||+||+++.++.+|++|||
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~------l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 35699999996 5787777532 67888899999999999999998 99999999999999999999999999
Q ss_pred ccccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh---------
Q 020027 212 LSFLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE--------- 277 (332)
Q Consensus 212 ~a~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~--------- 277 (332)
+++..... ..++..|++||.... ..++.++|||||||++|+|++|+.||...........+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
T cd07850 164 LARTAGTSFMMTPYVVTRYYRAPEVILG---MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEF 240 (353)
T ss_pred cceeCCCCCCCCCCcccccccCHHHHhC---CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 99765432 246778999998866 6788999999999999999999999975432221111100
Q ss_pred --------------cc------cccccCCcCC-C---CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 278 --------------MR------FSELLDPRLA-I---PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 278 --------------~~------~~~~~~~~~~-~---~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.. +.+....... . .........+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 0000000000 0 001122446779999999999999999999985
No 310
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=7.6e-39 Score=283.68 Aligned_cols=242 Identities=21% Similarity=0.252 Sum_probs=194.8
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
.|...+.||+|++|.||++. ..+++.+++|.+..... .....+.+|+.+++.++|||++++++++...+..++++||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 35556799999999999998 46788999998864322 1223467899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++... .+++..+..++.|++.|++|||++ +++||||+|+||+++.++.++++|||.+......
T Consensus 98 ~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 98 LEGGALTDIVTHT-----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred cCCCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 9999999998752 278889999999999999999998 9999999999999999999999999987643322
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|++||.... ..++.++|+||||+++|||++|+.||.+.........+.... .+.... ..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~--~~ 239 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISR---LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-----PPKLKN--LH 239 (285)
T ss_pred cccccccCCccccCHHHhcC---CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-----CCCCcc--cc
Confidence 247788999998765 568899999999999999999999987654443333332221 111111 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....+.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 240 KVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred cCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 12347889999999999999999999985
No 311
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=6.1e-39 Score=285.54 Aligned_cols=255 Identities=18% Similarity=0.163 Sum_probs=181.3
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeC-C---CCEEEEEEeccCccccccc---------ccHHHHHHHhccCCCCCccce
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLS-T---GKLVAVKRIHPRLVLSNAG---------FGFASVIKTLSLAQHPNIVPI 124 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~~~~~---------~~~~~e~~~l~~l~h~niv~~ 124 (332)
...++|...+.||+|+||.||+|... + +..+|+|............ .....+...+..++|+|++++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 34467999999999999999999953 3 4566666543222111000 011233345567789999999
Q ss_pred eeeeecCC----ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeC
Q 020027 125 LGFSQAPG----ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLN 200 (332)
Q Consensus 125 ~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 200 (332)
++.+.... ..++++|++. .++.+.+..... .++..+..++.|++.||.|||+. +++||||||+|||++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~ 160 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKC----KNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVD 160 (294)
T ss_pred EEeeeEecCCceEEEEEEehhc-cCHHHHHHhhcc----CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc
Confidence 99765443 3467788774 466666544321 46778889999999999999998 999999999999999
Q ss_pred CCCceEEccCCccccCC-------------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh
Q 020027 201 EKFCARVCDYGLSFLAP-------------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL 267 (332)
Q Consensus 201 ~~~~~kl~dfg~a~~~~-------------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~ 267 (332)
.++.++|+|||+|+... ....||..|+|||.+.. ..++.++|||||||++|||++|+.||.+..
T Consensus 161 ~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~---~~~~~~~DiwSlG~~l~el~~g~~P~~~~~ 237 (294)
T PHA02882 161 GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG---ACVTRRGDLESLGYCMLKWAGIKLPWKGFG 237 (294)
T ss_pred CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC---CCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999986432 11258899999998876 678999999999999999999999997652
Q ss_pred H-HHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 268 V-KWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 268 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
. .............++..+....+. +...+.+++..||+.+|++||++.++.+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 238 HNGNLIHAAKCDFIKRLHEGKIKIKN---ANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred cchHHHHHhHHHHHHHhhhhhhccCC---CCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 2 211111111111112222222221 2346889999999999999999999998763
No 312
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7.9e-39 Score=284.69 Aligned_cols=255 Identities=18% Similarity=0.161 Sum_probs=191.7
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++|+..+.||+|++|.||+|.. .+|+.||+|.+............+.+|+.+++.++|+|++++++++...+..+++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 4688899999999999999994 578999999987654333333357889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC-CCceEEccCCccccCCc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE-KFCARVCDYGLSFLAPE 218 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~dfg~a~~~~~ 218 (332)
|++ +++.+++..... ..+++..+..++.|++.||.|||++ +++|+||+|+||+++. ++.+|++|||++.....
T Consensus 82 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD--FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhCCC--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 996 577777754322 1257788889999999999999998 9999999999999985 56799999999865432
Q ss_pred c------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh---ccccccc-----
Q 020027 219 E------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE---MRFSELL----- 284 (332)
Q Consensus 219 ~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~---~~~~~~~----- 284 (332)
. ..++..|++||.+... ..++.++||||+|+++|+|+||+.||.+.........+.. ....+..
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 156 PVRTFTHEVVTLWYRAPEILLGS--RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred CccccccCceeecccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc
Confidence 1 2356789999987542 4578899999999999999999999976433222211110 0000000
Q ss_pred --C-----CcCCCC----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 285 --D-----PRLAIP----CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 285 --~-----~~~~~~----~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+ +..... .......++.+++.+|++.||++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 234 LPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred chhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000000 00112336789999999999999999999885
No 313
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=8.3e-39 Score=286.37 Aligned_cols=255 Identities=20% Similarity=0.253 Sum_probs=190.8
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC------
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG------ 132 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 132 (332)
.++|+..+.||+|+||.||+|.. .+++.||+|.+............+.+|+.++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 45788999999999999999994 57899999998754433333334568999999999999999999986553
Q ss_pred --ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 133 --ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 133 --~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
..+++|||+. +++.+++.... ..+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN---VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 3599999996 57777775432 2378999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCcc----------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc--
Q 020027 211 GLSFLAPEE----------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-- 278 (332)
Q Consensus 211 g~a~~~~~~----------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-- 278 (332)
|++...... ..++..|+|||..... ..++.++||||||+++|||+||..||.+.........+...
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGE--RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCG 241 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCC--cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 998644221 1356679999987542 34688999999999999999999999765443332222110
Q ss_pred ccccccCC---------cCCCCC-----------ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 279 RFSELLDP---------RLAIPC-----------EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 279 ~~~~~~~~---------~~~~~~-----------~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
....-..+ ....+. +......+.+++.+||..||++|||++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00000000 000000 0011235678999999999999999999875
No 314
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.2e-38 Score=277.20 Aligned_cols=247 Identities=22% Similarity=0.286 Sum_probs=201.9
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|...+.||+|+||.||++.. .+++.+++|.+............+.+|++.++.++|+|++++.+.+...+..++++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 477888999999999999994 4789999999876544334444578899999999999999999999988999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++.........+++..+..++.+++.|+.|||+. +++|+||+|+||++++++.++++|||.+......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 999999999976532234489999999999999999999998 9999999999999999999999999998654332
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|++||.... ..++.++|+||+|+++|++++|+.||................... .+.
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~---~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------~~~ 225 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQN---KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPP---------IPS 225 (258)
T ss_pred ceecceeeeecccChhHhcc---CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCC---------CCC
Confidence 246778999998765 567889999999999999999999997665444333332221111 111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....+.+++.+||..+|++|||+.++++
T Consensus 226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 226 QYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 22347889999999999999999999875
No 315
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.5e-38 Score=281.86 Aligned_cols=247 Identities=23% Similarity=0.293 Sum_probs=200.5
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeC-CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeE
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 136 (332)
..++.|+..+.||+|+||.||+|..+ ++..+++|.+..... ....+.+|+..++.++|+|++++++.+...+..++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 34667888899999999999999954 788999999875432 23356889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
++||+++++|.+++.... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+...
T Consensus 93 v~e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQL 166 (286)
T ss_pred EEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence 999999999999998754 2388999999999999999999998 9999999999999999999999999987543
Q ss_pred Ccc------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 217 PEE------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 217 ~~~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
... ..++..|++||.... ..++.++|+||||+++|||++|+.||...........+...... ..
T Consensus 167 ~~~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~ 236 (286)
T cd06614 167 TKEKSKRNSVVGTPYWMAPEVIKR---KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP-------PL 236 (286)
T ss_pred ccchhhhccccCCcccCCHhHhcC---CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-------CC
Confidence 321 235678999998765 56789999999999999999999999865443332222221111 11
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.........+.+++.+||+.+|.+|||+.++++
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 237 KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 111112346889999999999999999999975
No 316
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=7.6e-39 Score=283.26 Aligned_cols=252 Identities=24% Similarity=0.263 Sum_probs=194.3
Q ss_pred CCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC--CceeEEEe
Q 020027 63 FSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GERIIVSE 139 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 139 (332)
|+..+.||+|+||.||+|.. .+++.+|+|.+............+.+|+.+++.++|+|++++++++... +..++++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 56678899999999999994 4689999999987642233334578899999999999999999999887 88999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+++ +|..++.... ..+++..++.++.|++.||+|||+. +++|+||+|+||++++++.+|++|||++......
T Consensus 81 ~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDSPE---VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9974 8888876542 2378999999999999999999998 9999999999999999999999999998655432
Q ss_pred -------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------cccc---
Q 020027 220 -------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-------RFSE--- 282 (332)
Q Consensus 220 -------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~--- 282 (332)
..++..|++||..... ..++.++||||||+++|||+||+.||...........+... .+..
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGA--TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred CcccccccccccccCCceeeEcc--ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccccc
Confidence 2346779999977542 45789999999999999999999999765543332222110 0000
Q ss_pred -----ccCCcCCCCC------ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 283 -----LLDPRLAIPC------EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 283 -----~~~~~~~~~~------~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...+....+. ...+...+.+++.+||+.||.+|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000000 0001446789999999999999999999875
No 317
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=9.3e-39 Score=279.10 Aligned_cols=243 Identities=20% Similarity=0.186 Sum_probs=188.9
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHH-hccCCCCCccceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKT-LSLAQHPNIVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.||+|+||.||+|. ..+|+.||+|.+....... .....+..|... ....+|+|++++++++...+..++++||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 568999999999998 4578999999986543221 111223444433 4455899999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc--ccC
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE--EKR 221 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~--~~~ 221 (332)
++|.+++..... +++..+..++.|++.||.|||+. +++|+||+|+||++++++.++++|||++..... ...
T Consensus 82 ~~L~~~l~~~~~----~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 154 (260)
T cd05611 82 GDCASLIKTLGG----LPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFV 154 (260)
T ss_pred CCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccccccCC
Confidence 999999975432 78889999999999999999998 999999999999999999999999999876442 235
Q ss_pred CcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHH
Q 020027 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLA 301 (332)
Q Consensus 222 ~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (332)
++..|++||.... ..++.++||||||+++||++||..||...........+...... ............+.
T Consensus 155 ~~~~y~~pe~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 225 (260)
T cd05611 155 GTPDYLAPETILG---VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN------WPEEVKEFCSPEAV 225 (260)
T ss_pred CCcCccChhhhcC---CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC------CCCcccccCCHHHH
Confidence 7788999999875 45789999999999999999999999876555444433322111 01111112234788
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHH
Q 020027 302 KVALACVGNSRKNRPSIVQVATIL 325 (332)
Q Consensus 302 ~l~~~c~~~dp~~RPs~~~i~~~L 325 (332)
+++.+||+.||++|||+.++.+.|
T Consensus 226 ~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 226 DLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHccCCHHHccCCCcHHHHH
Confidence 999999999999999876555544
No 318
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.5e-38 Score=284.81 Aligned_cols=248 Identities=23% Similarity=0.269 Sum_probs=194.1
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
.|+..+.||+|+||.||+|+ ..+++.+|+|.+....... .....+.+|+.+++.++|+|++++.+++..++..++++|
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 36677889999999999999 4578899999986532222 222346789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
|+. +++.+++..... .+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 96 ~~~-~~l~~~~~~~~~---~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 96 YCL-GSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred ccC-CCHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 996 577776654322 278899999999999999999998 9999999999999999999999999998754432
Q ss_pred --cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 220 --KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 220 --~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
..++..|++||..........+.++|||||||++|||++|..||...........+..... +.. ......
T Consensus 169 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~ 240 (308)
T cd06634 169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-----PAL---QSGHWS 240 (308)
T ss_pred ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-----CCc---Cccccc
Confidence 3567889999987543335678899999999999999999999876543333222222111 111 111233
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 298 VRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
..+.+++.+||+.+|++||++.++++.
T Consensus 241 ~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 241 EYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 467899999999999999999999865
No 319
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.4e-38 Score=278.28 Aligned_cols=237 Identities=19% Similarity=0.179 Sum_probs=191.7
Q ss_pred eeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCH
Q 020027 69 IGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASL 146 (332)
Q Consensus 69 lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 146 (332)
||.|+||.||++.. .+++.+|+|.+....... .....+.+|+.+++.++||||+++++.+..++..++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999994 468999999997654322 2234578899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-----cC
Q 020027 147 DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE-----KR 221 (332)
Q Consensus 147 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~-----~~ 221 (332)
.+++..... +++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++++|||++...... ..
T Consensus 81 ~~~l~~~~~----l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~ 153 (262)
T cd05572 81 WTILRDRGL----FDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFC 153 (262)
T ss_pred HHHHhhcCC----CCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccccccc
Confidence 999976432 78888999999999999999998 9999999999999999999999999998765543 24
Q ss_pred CcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh--HHHHHHHhhhcccccccCCcCCCCCChHHHHH
Q 020027 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL--VKWALPLIKEMRFSELLDPRLAIPCEIKPLVR 299 (332)
Q Consensus 222 ~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (332)
++..|++||.+.. ..++.++|+||+|+++||+++|..||.... .......+..+. .....+ .....+
T Consensus 154 ~~~~~~~PE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~ 222 (262)
T cd05572 154 GTPEYVAPEIILN---KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN------GKLEFP--NYIDKA 222 (262)
T ss_pred CCcCccChhHhcC---CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC------CCCCCC--cccCHH
Confidence 6788999998765 567899999999999999999999997654 222222222100 111111 112447
Q ss_pred HHHHHHHcccCCCCCCCC-----HHHHHH
Q 020027 300 LAKVALACVGNSRKNRPS-----IVQVAT 323 (332)
Q Consensus 300 l~~l~~~c~~~dp~~RPs-----~~~i~~ 323 (332)
+.+++.+||+.||++||+ +.|+++
T Consensus 223 ~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 223 AKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 889999999999999999 677665
No 320
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.9e-38 Score=280.27 Aligned_cols=250 Identities=19% Similarity=0.188 Sum_probs=189.3
Q ss_pred CCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeeeeecC--CceeEEE
Q 020027 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGFSQAP--GERIIVS 138 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~ 138 (332)
|...+.||+|+||.||+|. ..+++.+|+|.++....... .....+|+..+.++. |+|++++++++..+ +..++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 4567889999999999999 55789999999876432222 223467888888885 99999999999877 8899999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
||++ +++.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||+++. +.+||+|||++.....
T Consensus 80 e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 80 ELMD-MNLYELIKGRK---RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred ecCC-ccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 9997 57777775432 2378999999999999999999998 9999999999999999 9999999999875432
Q ss_pred c-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc--cccc----ccC--
Q 020027 219 E-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM--RFSE----LLD-- 285 (332)
Q Consensus 219 ~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~~~----~~~-- 285 (332)
. ..++..|++||.+... ..++.++|||||||++|||++|..||.+....+....+... ...+ ...
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07831 152 KPPYTEYISTRWYRAPECLLTD--GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKS 229 (282)
T ss_pred CCCcCCCCCCcccCChhHhhcC--CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccc
Confidence 2 2367789999976542 45788999999999999999999999765433322221110 0000 000
Q ss_pred --CcCCCCC---------ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 286 --PRLAIPC---------EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 286 --~~~~~~~---------~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....+. .......+.+++.+||+.||++|||++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000000 0123457889999999999999999999875
No 321
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.6e-38 Score=285.38 Aligned_cols=256 Identities=18% Similarity=0.214 Sum_probs=190.0
Q ss_pred CCCCCceeeccCCeEEEEEEe-C--CCCEEEEEEeccCccc-ccccccHHHHHHHhccCCCCCccceeeeeecC--Ccee
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-S--TGKLVAVKRIHPRLVL-SNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GERI 135 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~--~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 135 (332)
+|+..+.||+|+||.||+|.. . +++.||+|.+...... ........+|+.+++.++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 477788999999999999994 3 5889999999864321 22223467899999999999999999999887 7899
Q ss_pred EEEeccCCCCHHHHhcccCCC-CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC----CCceEEccC
Q 020027 136 IVSEFINMASLDFYLHENNDG-ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE----KFCARVCDY 210 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~----~~~~kl~df 210 (332)
++|||+++ ++.+++...... ...++...+..++.|++.|+.|||+. +++||||||+||+++. ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 676666543322 12478899999999999999999998 9999999999999999 999999999
Q ss_pred CccccCCcc---------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHH---------HH
Q 020027 211 GLSFLAPEE---------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKW---------AL 272 (332)
Q Consensus 211 g~a~~~~~~---------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~---------~~ 272 (332)
|++...... ..++..|+|||.+... ..++.++|||||||++|||++|+.||.+...+. ..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQL 234 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHH
Confidence 998754321 2457789999987542 457889999999999999999999987543221 00
Q ss_pred HHh-h--------------hc-ccccccCC--cCCCC-CCh--------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 273 PLI-K--------------EM-RFSELLDP--RLAIP-CEI--------KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 273 ~~~-~--------------~~-~~~~~~~~--~~~~~-~~~--------~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..+ . .. .+....+. ....+ ... ....++.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 235 ERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 0 00 00000000 00011 000 12236789999999999999999999875
No 322
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.9e-38 Score=287.67 Aligned_cols=253 Identities=25% Similarity=0.316 Sum_probs=191.0
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC-----Cc
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP-----GE 133 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 133 (332)
.++|...+.||+|+||.||+|. ..+|+.||+|.+..... ......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 4679999999999999999998 56889999999864321 22233467899999999999999999987544 35
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
.++++||++ +++..++... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~-----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 83 VYIVQELME-TDLYKLIKTQ-----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred EEEEehhcc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence 799999996 5787777542 278899999999999999999999 9999999999999999999999999998
Q ss_pred ccCCcc---------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh-------
Q 020027 214 FLAPEE---------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE------- 277 (332)
Q Consensus 214 ~~~~~~---------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~------- 277 (332)
...... ..++..|+|||..... ..++.++||||+||++|||++|+.||.+.........+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~ 231 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQ 231 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 654321 2467789999986542 4578999999999999999999999976433222111110
Q ss_pred --------cccccccC---CcCCCCC---ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 278 --------MRFSELLD---PRLAIPC---EIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 278 --------~~~~~~~~---~~~~~~~---~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
........ .....+. ......++.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 0000000 01123467899999999999999999999875
No 323
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.6e-38 Score=285.33 Aligned_cols=250 Identities=20% Similarity=0.178 Sum_probs=185.8
Q ss_pred ceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCH
Q 020027 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASL 146 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 146 (332)
+.+|.|+++.||++.. +++.||+|.++...........+.+|+..++.++|+||+++++++...+..+++|||+++++|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3344555555555544 789999999976533333444688999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc--------
Q 020027 147 DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-------- 218 (332)
Q Consensus 147 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~-------- 218 (332)
.+++...... .+++.....++.|+++||.|||++ +|+||||||+||+++.++.+|++|||.+.....
T Consensus 87 ~~~l~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 87 EDLLKTHFPE--GLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred HHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 9999764322 278888999999999999999999 999999999999999999999999998753321
Q ss_pred -----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccC--------
Q 020027 219 -----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLD-------- 285 (332)
Q Consensus 219 -----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 285 (332)
...++..|++||.+.... ..++.++|+|||||++|||++|+.||..............+.....++
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNL-QGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYE 240 (314)
T ss_pred ccccccccccccccCHHHhcCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhc
Confidence 123566899999886421 347889999999999999999999997643222111111111100000
Q ss_pred ------------Cc----CCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 286 ------------PR----LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 286 ------------~~----~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+. ...........++.+++.+||+.||++|||++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 241 DSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred CCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00 000111122346789999999999999999999876
No 324
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=5e-38 Score=282.16 Aligned_cols=246 Identities=24% Similarity=0.265 Sum_probs=192.6
Q ss_pred CCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 63 FSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
|...+.||+|+||.||+|+. .+++.|++|.+........ ....+.+|+.+++.++|||++++++++...+..+++|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 56667899999999999994 5788999999875433222 223467899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc--
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-- 218 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~-- 218 (332)
+. +++.+++..... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.+|++|||++.....
T Consensus 103 ~~-~~l~~~l~~~~~---~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~ 175 (313)
T cd06633 103 CL-GSASDLLEVHKK---PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN 175 (313)
T ss_pred CC-CCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCCCC
Confidence 96 567776654322 378999999999999999999998 999999999999999999999999999865432
Q ss_pred ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHH
Q 020027 219 EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLV 298 (332)
Q Consensus 219 ~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (332)
...++..|++||.+.......++.++|||||||++|||++|..||.+................ ... ......
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~ 247 (313)
T cd06633 176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSP-----TLQ---SNEWTD 247 (313)
T ss_pred CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-----CCC---ccccCH
Confidence 235778899999986433356889999999999999999999998765433322222211111 111 111123
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 299 RLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 299 ~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+.+++.+||+.+|++|||+.++++
T Consensus 248 ~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 248 SFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 5778999999999999999999985
No 325
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.4e-38 Score=281.05 Aligned_cols=240 Identities=22% Similarity=0.261 Sum_probs=183.3
Q ss_pred eeeccCCeEEEEEEe-CCCCEEEEEEeccCccccccc-ccHHHHHHH---hccCCCCCccceeeeeecCCceeEEEeccC
Q 020027 68 IIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAG-FGFASVIKT---LSLAQHPNIVPILGFSQAPGERIIVSEFIN 142 (332)
Q Consensus 68 ~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~-~~~~~e~~~---l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 142 (332)
.||+|+||.||++.. .+++.+|+|.+.+........ ..+.+|..+ +...+|||++.+.+.+..++..+++|||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999994 578999999987654332221 123344333 334479999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc----
Q 020027 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE---- 218 (332)
Q Consensus 143 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~---- 218 (332)
+++|.+++..... +++..+..++.|++.||.|||+. +++||||||+||++++++.++++|||++.....
T Consensus 81 ~~~L~~~i~~~~~----l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 153 (279)
T cd05633 81 GGDLHYHLSQHGV----FSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 153 (279)
T ss_pred CCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCcc
Confidence 9999999875432 89999999999999999999998 999999999999999999999999999864322
Q ss_pred ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHH
Q 020027 219 EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLV 298 (332)
Q Consensus 219 ~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (332)
...++..|++||.... +..++.++|+||+||++|||++|..||.+...... ..+..... ..... .+.....
T Consensus 154 ~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~--~~~~~----~~~~~~~ 224 (279)
T cd05633 154 ASVGTHGYMAPEVLQK--GTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTL--TVNVE----LPDSFSP 224 (279)
T ss_pred CcCCCcCccCHHHhcC--CCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhh--cCCcC----CccccCH
Confidence 2357889999998753 24578999999999999999999999975422111 11111110 00111 1112234
Q ss_pred HHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 299 RLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 299 ~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
++.+++.+||..||++|| |++++++
T Consensus 225 ~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 225 ELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred HHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 778999999999999999 5888876
No 326
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.6e-39 Score=278.85 Aligned_cols=247 Identities=21% Similarity=0.207 Sum_probs=205.7
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
.+.|...+.||.|.-|+||.++. .++..+|+|++.+...... ...+...|-.+|+.++||-+..++..++.+...+++
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 45677778999999999999994 4668999999987765433 233567788899999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC-
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA- 216 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~- 216 (332)
||||+||+|....+.+... -+++..+..++..++.||+|||-. |||.|||||+|||+.++|.+-++||.++...
T Consensus 156 meyCpGGdL~~LrqkQp~~--~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGK--RFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred EecCCCccHHHHHhhCCCC--ccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 9999999999988765443 388999999999999999999998 9999999999999999999999999875100
Q ss_pred ----------------------------------C-c--------------------------ccCCcccccCccccccc
Q 020027 217 ----------------------------------P-E--------------------------EKRGLAGYVDDDYWHEK 235 (332)
Q Consensus 217 ----------------------------------~-~--------------------------~~~~~~~~~~pe~~~~~ 235 (332)
. . +-.||..|.|||...+
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G- 309 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG- 309 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec-
Confidence 0 0 0148899999999887
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCC
Q 020027 236 GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNR 315 (332)
Q Consensus 236 ~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~R 315 (332)
...+.++|.|+|||++|||+.|..||.|...++.+..+.. ..+..+........+.+||++.|..||.+|
T Consensus 310 --~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~--------~~l~Fp~~~~vs~~akDLIr~LLvKdP~kR 379 (459)
T KOG0610|consen 310 --EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG--------QPLKFPEEPEVSSAAKDLIRKLLVKDPSKR 379 (459)
T ss_pred --CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc--------CCCcCCCCCcchhHHHHHHHHHhccChhhh
Confidence 6678999999999999999999999999877776655543 334455555566688899999999999999
Q ss_pred CC----HHHHH
Q 020027 316 PS----IVQVA 322 (332)
Q Consensus 316 Ps----~~~i~ 322 (332)
.- +.||-
T Consensus 380 lg~~rGA~eIK 390 (459)
T KOG0610|consen 380 LGSKRGAAEIK 390 (459)
T ss_pred hccccchHHhh
Confidence 87 55554
No 327
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4.3e-38 Score=278.58 Aligned_cols=252 Identities=21% Similarity=0.254 Sum_probs=190.4
Q ss_pred CCCCceeeccCCeEEEEEEeC-CCCEEEEEEeccCcccccccccHHHHHHHhccC---CCCCccceeeeeecCCc-----
Q 020027 63 FSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA---QHPNIVPILGFSQAPGE----- 133 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~----- 133 (332)
|+..+.||+|+||.||+|..+ +++.+|+|.++...........+.+|+.+++.+ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999964 589999999976544332233456677666544 69999999999987766
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
.+++|||++ ++|.+++..... ..+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.+|++|||.+
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK--PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 899999997 578888865432 2378999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-cc------c
Q 020027 214 FLAPEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-RF------S 281 (332)
Q Consensus 214 ~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~~------~ 281 (332)
...... ..++..|++||.+.. ..++.++|+|||||++|||++|..||.+....+....+... .. .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 155 RIYSFEMALTSVVVTLWYRAPEVLLQ---SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred eeccCCcccccccccccccChHHhcc---CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcC
Confidence 665332 235778999999876 56888999999999999999999999876544332222110 00 0
Q ss_pred c-------ccCCcCCCCC---ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 282 E-------LLDPRLAIPC---EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 282 ~-------~~~~~~~~~~---~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
. .......... .......+.+++.+||+.||++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0 0000000000 0122346779999999999999999999874
No 328
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.3e-38 Score=280.03 Aligned_cols=254 Identities=19% Similarity=0.225 Sum_probs=194.7
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|+..+.||.|++|.||+|+. .+|+.||+|.++..... .....+.+|+.+++.++|+|++++++++...+..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 478889999999999999995 57899999998765432 2223467899999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc--
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-- 218 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~-- 218 (332)
+++ +|.+++..... ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++++|||++.....
T Consensus 80 ~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 80 MDK-DLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred CCc-cHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 985 88888865432 22378999999999999999999998 999999999999999999999999999865432
Q ss_pred ----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------ccc-----c
Q 020027 219 ----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-------RFS-----E 282 (332)
Q Consensus 219 ----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-------~~~-----~ 282 (332)
...++..|++||.+... ..++.++|+||||+++||+++|+.||.+....+....+.+. .+. .
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGS--RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLP 232 (284)
T ss_pred cccccccccccccChHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCc
Confidence 22457789999987542 45688999999999999999999999865443332221110 000 0
Q ss_pred ccCCcCCCC-------CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 283 LLDPRLAIP-------CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 283 ~~~~~~~~~-------~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
......... ........+.+++.+||+.||++|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 233 EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000 00112346779999999999999999999875
No 329
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.2e-38 Score=273.50 Aligned_cols=243 Identities=24% Similarity=0.333 Sum_probs=197.8
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|+..+.||+|++|.||++.. .+++.|++|.+............+.+|++++++++|+|++++++++..++..++++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 477889999999999999984 5788999999986654323334678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++.... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKKFG----PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 99999999987642 278999999999999999999998 9999999999999999999999999998755432
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..++..|++||.... ...+.++|+||+|+++|++++|..||................ ....+ .
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~---~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~--~ 221 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEM---SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDD-------HPPLP--E 221 (254)
T ss_pred ccccccccchhhcCHhhhcC---CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccC-------CCCCC--C
Confidence 246778999998865 457889999999999999999999987654322222111111 11111 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....+.+++.+||+.+|++|||+.+++.
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 222 GISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 22346779999999999999999999874
No 330
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.1e-38 Score=289.02 Aligned_cols=253 Identities=23% Similarity=0.289 Sum_probs=193.3
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec----CCcee
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA----PGERI 135 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~ 135 (332)
++|+..+.||+|+||.||+|. ..+|+.||+|.+............+.+|+.+++.++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 678889999999999999999 5679999999987654333333456789999999999999999998753 34679
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
+++||+. ++|.+++..... +++..+..++.|++.||.|||++ +++||||||+||++++++.+||+|||++..
T Consensus 85 lv~e~~~-~~l~~~~~~~~~----~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQP----LTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEehhh-hhHHHHhccCCC----CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccccee
Confidence 9999995 688888864332 78999999999999999999998 999999999999999999999999999864
Q ss_pred CCc----------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh--------
Q 020027 216 APE----------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE-------- 277 (332)
Q Consensus 216 ~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~-------- 277 (332)
... ...++..|++||.+... ..++.++|||||||++|||++|+.||.+.........+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~ 234 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSL--PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCC--cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhH
Confidence 322 12467789999987542 4578999999999999999999999976433222111111
Q ss_pred -------cccccc---cCCcCCCCC---ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 278 -------MRFSEL---LDPRLAIPC---EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 278 -------~~~~~~---~~~~~~~~~---~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...... .......+. ......++.+++.+||+.||++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000000 000000000 0112457889999999999999999999876
No 331
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.1e-38 Score=289.40 Aligned_cols=255 Identities=21% Similarity=0.243 Sum_probs=194.4
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC-----Cc
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP-----GE 133 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 133 (332)
.++|...+.||+|+||.||+|. ..+++.||+|.++...........+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 3568889999999999999999 56899999999876543333334567899999999999999999987644 34
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
.++++||+. ++|.+++.... .+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ----TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 799999996 68888886543 278999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCcc------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh----------
Q 020027 214 FLAPEE------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE---------- 277 (332)
Q Consensus 214 ~~~~~~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~---------- 277 (332)
...... ..++..|++||..... ..++.++|+|||||++|||++|+.||.+.........+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07858 156 RTTSEKGDFMTEYVVTRWYRAPELLLNC--SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDL 233 (337)
T ss_pred cccCCCcccccccccccCccChHHHhcC--CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHh
Confidence 765432 2467789999987642 3578999999999999999999999976432221111110
Q ss_pred -----cccccccC---CcCCC---CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 278 -----MRFSELLD---PRLAI---PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 278 -----~~~~~~~~---~~~~~---~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
........ ..... ........++.+++.+||+.||++|||++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 234 GFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000000 00000 0011233467899999999999999999999875
No 332
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.7e-39 Score=294.38 Aligned_cols=247 Identities=22% Similarity=0.296 Sum_probs=211.6
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeE
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 136 (332)
.....|.+.+.||+|.|+.|..|+ .-++..||+|.+++..........+.+|+++|..++|||||+++.+...+..+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 446689999999999999999999 4589999999999877666555568999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
||||+.+|.+.+|+..++. +....+..++.|+..|++|||++ .|+|||||++|+|++.+.++||+|||++...
T Consensus 133 V~eya~~ge~~~yl~~~gr----~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGR----MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFF 205 (596)
T ss_pred EEEeccCchhHHHHHhccc----chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceee
Confidence 9999999999999988765 55578889999999999999999 9999999999999999999999999999765
Q ss_pred C-----cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 217 P-----EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 217 ~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
. .+.+|++.|.|||.+.+. ...++.+|+||+|+++|-|+.|..||.|....+....... ..++.+
T Consensus 206 ~~~~~lqt~cgsppyAaPEl~~g~--~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~--------gk~rIp 275 (596)
T KOG0586|consen 206 DYGLMLQTFCGSPPYAAPELFNGK--KYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR--------GKYRIP 275 (596)
T ss_pred cccccccccCCCCCccChHhhcCc--ccCCcceehhhhhhhheeeeecccccCCcccccccchhee--------eeeccc
Confidence 4 334799999999999886 4668999999999999999999999998765544333333 234444
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
....+ ++.+++++.+..+|.+|++.+++-.
T Consensus 276 ~~ms~--dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 276 FYMSC--DCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ceeec--hhHHHHHHhhccCccccCCHHHhhh
Confidence 44443 5568999999999999999998854
No 333
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.9e-39 Score=312.24 Aligned_cols=248 Identities=20% Similarity=0.263 Sum_probs=190.1
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec------
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA------ 130 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------ 130 (332)
.-..+|+....||+||||.||+++. -+|+.+|||++.... .........+|+..+++++|||||+++..+..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 4556799999999999999999994 499999999998765 44445568899999999999999987742100
Q ss_pred -------------------------------------------------C------------------------------
Q 020027 131 -------------------------------------------------P------------------------------ 131 (332)
Q Consensus 131 -------------------------------------------------~------------------------------ 131 (332)
.
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence 0
Q ss_pred ----------------------------------CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHH
Q 020027 132 ----------------------------------GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177 (332)
Q Consensus 132 ----------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~ 177 (332)
..+||.||||+..++.+++.++... -.....++++.+|++||+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~---~~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN---SQRDEAWRLFREILEGLA 711 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc---hhhHHHHHHHHHHHHHHH
Confidence 1247889999888888888765432 135678899999999999
Q ss_pred HhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC------------------------cccCCcccccCccccc
Q 020027 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP------------------------EEKRGLAGYVDDDYWH 233 (332)
Q Consensus 178 ~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~------------------------~~~~~~~~~~~pe~~~ 233 (332)
|+|++ ||+||||||.||++++++.|||+|||+|.... ....||.-|+|||.+.
T Consensus 712 YIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 712 YIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 99999 99999999999999999999999999985410 0125899999999998
Q ss_pred ccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchh-HHHHHHHhhhcccccccCCcCCCC--CChHHHHHHHHHHHHcccC
Q 020027 234 EKGGGNATRESDVYGFGVVLLEILSGRRCEEGLL-VKWALPLIKEMRFSELLDPRLAIP--CEIKPLVRLAKVALACVGN 310 (332)
Q Consensus 234 ~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~c~~~ 310 (332)
......|+.|+|+||+|++++||+. ||...- -..+...++.+ .++.+ ...+....-.+++++++++
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g--------~iP~~~~f~~~~~~~e~slI~~Ll~h 857 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKG--------SIPEPADFFDPEHPEEASLIRWLLSH 857 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccC--------CCCCCcccccccchHHHHHHHHHhcC
Confidence 7655579999999999999999986 554321 11222233332 22222 1112223456899999999
Q ss_pred CCCCCCCHHHHHH
Q 020027 311 SRKNRPSIVQVAT 323 (332)
Q Consensus 311 dp~~RPs~~~i~~ 323 (332)
||++|||+.|+++
T Consensus 858 dP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 858 DPSKRPTATELLN 870 (1351)
T ss_pred CCccCCCHHHHhh
Confidence 9999999999985
No 334
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.8e-38 Score=287.95 Aligned_cols=254 Identities=23% Similarity=0.264 Sum_probs=192.7
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecC--Ccee
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAP--GERI 135 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~~ 135 (332)
.++|+..+.||+|+||.||+|.. .+++.+|+|.+............+.+|+.+++.+ +|+||+++++++... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 46788899999999999999994 4788999999865433233333467899999999 999999999988654 3679
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++|||++ ++|..++... .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+|++|||++..
T Consensus 86 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 9999997 5898888653 278888999999999999999998 999999999999999999999999999864
Q ss_pred CCcc-----------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcc-----
Q 020027 216 APEE-----------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMR----- 279 (332)
Q Consensus 216 ~~~~-----------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~----- 279 (332)
.... ..++..|++||.+... ..++.++|+||||+++|||+||+.||.+.........+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGS--TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA 234 (337)
T ss_pred cccccccccCcchhcccccccccCceeeecc--ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 4221 1367789999987542 567889999999999999999999997644332211111100
Q ss_pred ----------cccccC----CcCCC--CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 280 ----------FSELLD----PRLAI--PCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 280 ----------~~~~~~----~~~~~--~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
....++ ..... ........++.+++.+||+.||++|||+.++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000 00000 0001124478899999999999999999999864
No 335
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.7e-38 Score=274.11 Aligned_cols=244 Identities=24% Similarity=0.301 Sum_probs=197.5
Q ss_pred CCCCCceeeccCCeEEEEEEeC-CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC--CceeEEE
Q 020027 62 GFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GERIIVS 138 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 138 (332)
+|...+.||+|++|.||+|... +++.|++|.+............+.+|+..+++++|+|++++++.+... +..++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999954 789999999876543333344678999999999999999999999888 8899999
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
|++++++|.+++.... .+++..+..++.|++.|+.|||+. +++|+|++|+||+++.++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKFG----KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 9999999999997653 388999999999999999999998 999999999999999999999999998865433
Q ss_pred c--------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH-HHHHHHhhhcccccccCCcCC
Q 020027 219 E--------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV-KWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 219 ~--------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 289 (332)
. ..++..|.+||.... ...+.++||||||++++++++|..||..... ......... ....
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~~~~ 222 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRG---EEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS--------SGEP 222 (260)
T ss_pred ccccccccCCCCCccccCHhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc--------cCCC
Confidence 2 246778999998876 4588999999999999999999999976541 111111110 0001
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 290 IPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 290 ~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...+......+.+++.+||+.||++|||+.++++
T Consensus 223 ~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 223 PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 1111122457889999999999999999999975
No 336
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.7e-38 Score=277.56 Aligned_cols=240 Identities=23% Similarity=0.253 Sum_probs=193.3
Q ss_pred eeccCCeEEEEEEeC-CCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCH
Q 020027 69 IGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASL 146 (332)
Q Consensus 69 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 146 (332)
||+|+||.||++... +|+.+++|.+....... .....+.+|+..+++++|+|++++++.+...+..++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999954 69999999987543321 2233578889999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-------
Q 020027 147 DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE------- 219 (332)
Q Consensus 147 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~------- 219 (332)
.+++.... .+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++++|||++......
T Consensus 81 ~~~l~~~~----~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENVG----SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 99997643 278999999999999999999998 9999999999999999999999999988653222
Q ss_pred -------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 220 -------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 220 -------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
..++..|++||.... ...+.++|+||||+++||+++|..||...........+..+. ...+.
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~---~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~ 222 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILG---QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK--------IEWPE 222 (265)
T ss_pred ccccccCcccCccccCHHHhcC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--------cCCCc
Confidence 245678999998866 457889999999999999999999998766555444333321 11111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
.......+.+++.+||+.+|++|||+.++.+.|+
T Consensus 223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 223 DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 1112347789999999999999999966665554
No 337
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1e-37 Score=273.31 Aligned_cols=244 Identities=20% Similarity=0.227 Sum_probs=191.9
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccc---ccccccHHHHHHHhccCCCCCccceeeeeecC--Cce
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVL---SNAGFGFASVIKTLSLAQHPNIVPILGFSQAP--GER 134 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 134 (332)
.+|...+.||+|+||.||+|. ..+++.||+|.+...... ......+.+|+.++++++|+||+++++++... +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 468889999999999999999 467999999987543211 12223578899999999999999999998654 457
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
++++||+++++|.+++..... +++.....++.|++.|+.|||++ +++|+||+|+||+++.++.++++|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~----l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGA----LTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 899999999999999865432 68888999999999999999998 99999999999999999999999999986
Q ss_pred cCCc---------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccC
Q 020027 215 LAPE---------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLD 285 (332)
Q Consensus 215 ~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 285 (332)
.... ...++..|++||.... ...+.++|+|||||++||+++|+.||.+..............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------ 225 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISG---EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQP------ 225 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcC---CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCC------
Confidence 5321 1246778999998875 567889999999999999999999997653332221111110
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..... +......+.+++.+||+ +|..|||+.++++
T Consensus 226 ~~~~~--p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 226 TKPML--PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCCC--CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 01111 22233468899999999 5799999998875
No 338
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=9.1e-38 Score=270.58 Aligned_cols=244 Identities=27% Similarity=0.312 Sum_probs=198.2
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|...+.||+|++|.||++.. .+++.+++|.+..... .....+.+|+..++.++|+|++++.+++..++..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 367788999999999999995 4788999999876543 2334578999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+++++|.+++.... ..+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 79 ~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 79 CSGGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred CCCCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 99999999987642 2379999999999999999999998 9999999999999999999999999998665432
Q ss_pred ----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 220 ----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 220 ----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
..++..|++||.... ...+.++|+||||+++|++++|+.||.................. . .+.+..
T Consensus 153 ~~~~~~~~~~~~~PE~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~--~~~~~~ 222 (253)
T cd05122 153 ARNTMVGTPYWMAPEVING---KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPP-----G--LRNPEK 222 (253)
T ss_pred cccceecCCcccCHHHHcC---CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCC-----C--cCcccc
Confidence 346788999999876 45789999999999999999999999765333332222221111 1 111111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 296 PLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
....+.+++.+||+.||++|||+.++++
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1346889999999999999999999875
No 339
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=4.7e-38 Score=277.40 Aligned_cols=241 Identities=21% Similarity=0.238 Sum_probs=187.4
Q ss_pred eeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCH
Q 020027 69 IGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASL 146 (332)
Q Consensus 69 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 146 (332)
||+|+||.||++. ..+|+.+|+|.+....... .....+..|+.+++.++|||++++++.+...+..+++|||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 6899999999998 4578999999987543222 2223457899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-----ccC
Q 020027 147 DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-----EKR 221 (332)
Q Consensus 147 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~-----~~~ 221 (332)
.+++..... ..+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||.+..... ...
T Consensus 81 ~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGE--PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA 155 (277)
T ss_pred HHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccccc
Confidence 999876442 2378999999999999999999998 999999999999999999999999998865432 124
Q ss_pred CcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHH
Q 020027 222 GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLA 301 (332)
Q Consensus 222 ~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (332)
++..|++||.+.. ..++.++|+||||+++|+|++|+.||...........+...... .....+ ......+.
T Consensus 156 ~~~~y~~PE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~ 226 (277)
T cd05577 156 GTPGYMAPEVLQG---EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE----MAVEYP--DKFSPEAK 226 (277)
T ss_pred CCCCcCCHHHhcC---CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc----ccccCC--ccCCHHHH
Confidence 6678999999875 55889999999999999999999999764321111111111110 011111 11233678
Q ss_pred HHHHHcccCCCCCCC-----CHHHHHH
Q 020027 302 KVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 302 ~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
+++.+||+.||++|| ++.++++
T Consensus 227 ~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 227 DLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHHccCChhHccCCCcccHHHHHh
Confidence 999999999999999 5555543
No 340
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.7e-38 Score=280.20 Aligned_cols=238 Identities=21% Similarity=0.247 Sum_probs=191.3
Q ss_pred CceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCC
Q 020027 66 RRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMA 144 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 144 (332)
...||+|+||.||++.. .+++.||+|.+.... ......+.+|+..++.++|+|++++++.+...+..+++|||++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 35799999999999984 688999999875432 122334788999999999999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-----
Q 020027 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE----- 219 (332)
Q Consensus 145 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~----- 219 (332)
+|.+++... .+++.....++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 103 ~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 103 ALTDIVTHT-----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred cHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccccc
Confidence 999987542 268889999999999999999998 9999999999999999999999999987644322
Q ss_pred -cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHH
Q 020027 220 -KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLV 298 (332)
Q Consensus 220 -~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (332)
..++..|++||.... ..++.++|+||+|+++|||++|..||.+.........+.... .+..... .....
T Consensus 175 ~~~~~~~y~~pE~~~~---~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~ 244 (292)
T cd06657 175 SLVGTPYWMAPELISR---LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-----PPKLKNL--HKVSP 244 (292)
T ss_pred ccccCccccCHHHhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC-----CcccCCc--ccCCH
Confidence 246788999998765 567889999999999999999999998754444333332211 1111111 11223
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 299 RLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 299 ~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+.+++.+||+.||.+||++.++++
T Consensus 245 ~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 245 SLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHHhCCcccCcCHHHHhc
Confidence 5778999999999999999999886
No 341
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.7e-39 Score=294.79 Aligned_cols=240 Identities=21% Similarity=0.298 Sum_probs=198.5
Q ss_pred CceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccccc--ccHHHHHHHhccCCCCCccceeeeeecCCc--eeEEEec
Q 020027 66 RRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAG--FGFASVIKTLSLAQHPNIVPILGFSQAPGE--RIIVSEF 140 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~--~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~ 140 (332)
...||+|+|-+||+|. -.+|..||--.++.+....... ..|..|+.+|+.|+||||++++.++.+... .-+++|+
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 3579999999999999 4578888877666554444333 568999999999999999999999977654 7789999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC-CCceEEccCCccccCCcc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE-KFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~dfg~a~~~~~~ 219 (332)
+..|+|..|.++++. ++...+..++.||++||.|||++ .|+|+|||||..||+++. .|.|||+|+|+|......
T Consensus 125 ~TSGtLr~Y~kk~~~----vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR----VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ccCCcHHHHHHHhcc----CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999998876 78889999999999999999998 668999999999999985 689999999999765433
Q ss_pred ----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCch-hHHHHHHHhhhcccccccCCcCCCCCCh
Q 020027 220 ----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGL-LVKWALPLIKEMRFSELLDPRLAIPCEI 294 (332)
Q Consensus 220 ----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (332)
..||+.|||||.+.. .|+..+||||||++++||+|+..||... .+..+++.+..|.....+.. ...+
T Consensus 200 ~aksvIGTPEFMAPEmYEE----~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~k---V~dP- 271 (632)
T KOG0584|consen 200 HAKSVIGTPEFMAPEMYEE----NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSK---VKDP- 271 (632)
T ss_pred ccceeccCccccChHHHhh----hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhc---cCCH-
Confidence 369999999999984 7899999999999999999999999865 35566666666543222111 1111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 295 KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 295 ~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
++.++|.+|+.. ..+|||+.|++.
T Consensus 272 ----evr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 272 ----EVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ----HHHHHHHHHhcC-chhccCHHHHhh
Confidence 677899999998 999999999875
No 342
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=6.3e-38 Score=276.93 Aligned_cols=252 Identities=21% Similarity=0.232 Sum_probs=194.3
Q ss_pred CCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEecc
Q 020027 63 FSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 141 (332)
|...+.||+|++|.||+|.. .+++.+++|.+............+.+|+..++.++|+|++++++++..++..++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 56678899999999999994 57899999998765433233345788999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc--
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE-- 219 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~-- 219 (332)
++ ++.+++.... ..+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.++++|||.+......
T Consensus 81 ~~-~l~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 81 DT-DLYKLIKDRQ---RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred CC-CHHHHHHhhc---ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 75 7877776532 2378999999999999999999998 9999999999999999999999999998655432
Q ss_pred ----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------ccccccC---
Q 020027 220 ----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-------RFSELLD--- 285 (332)
Q Consensus 220 ----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~--- 285 (332)
..++..|++||..... ...+.++|+||||+++|+++||+.||.+....+....+... .+....+
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGD--KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred cccCccCcccccCcHHHhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhh
Confidence 2356779999987652 36889999999999999999999999764432221111110 0000000
Q ss_pred ------CcCCC----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 286 ------PRLAI----PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 286 ------~~~~~----~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.... ........++.+++.+||+.||.+||++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000 001123457889999999999999999999875
No 343
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1e-37 Score=275.47 Aligned_cols=237 Identities=20% Similarity=0.242 Sum_probs=184.0
Q ss_pred eeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccc-cccHHHHH---HHhccCCCCCccceeeeeecCCceeEEEeccC
Q 020027 68 IIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA-GFGFASVI---KTLSLAQHPNIVPILGFSQAPGERIIVSEFIN 142 (332)
Q Consensus 68 ~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~-~~~~~~e~---~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 142 (332)
.||+|+||.||++. ..+++.||+|.+......... ...+..|. ..++..+|||++++.+.+..++..+++|||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 48999999999998 457899999998765432221 11233333 34455689999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc----
Q 020027 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE---- 218 (332)
Q Consensus 143 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~---- 218 (332)
+++|.+++.... .+++..+..++.|++.|+.|||+. +++|||+||+||+++.++.+||+|||++.....
T Consensus 81 g~~L~~~l~~~~----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 153 (278)
T cd05606 81 GGDLHYHLSQHG----VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 153 (278)
T ss_pred CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCc
Confidence 999999886543 389999999999999999999998 999999999999999999999999999864332
Q ss_pred ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH---HHHHHHhhhcccccccCCcCCCCCChH
Q 020027 219 EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV---KWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 219 ~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
...++..|++||.+... ..++.++||||+|+++|||++|+.||.+... ......... .... .+. .
T Consensus 154 ~~~~~~~y~aPE~~~~~--~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~--~~~--~ 221 (278)
T cd05606 154 ASVGTHGYMAPEVLQKG--VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT------MAVE--LPD--S 221 (278)
T ss_pred CcCCCcCCcCcHHhcCC--CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc------cCCC--CCC--c
Confidence 23578899999998642 4578999999999999999999999976522 111111111 0111 111 1
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 296 PLVRLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
...++.+++.+|+..||.+|| ++.++++
T Consensus 222 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 222 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 234788999999999999999 9999875
No 344
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=6.8e-38 Score=273.63 Aligned_cols=246 Identities=22% Similarity=0.242 Sum_probs=191.1
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcc---cccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLV---LSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
+|...+.||+|+||.||++.. ..+..+++|.++.... .......+..|+.+++.++|||++++++++...+..+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 477889999999999999984 3455566666553222 122223456788999999999999999999988899999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
+||+++++|.+++.........+++..++.++.|++.|+.|||+. +++|+||+|+||++++ +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998865333334589999999999999999999998 9999999999999975 569999999886543
Q ss_pred c------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 218 E------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 218 ~------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
. ...++..|++||.... ..++.++|+||||+++|+|++|..||.+.........+..+. .+ .
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~----~ 224 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKH---QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGP-----TP----S 224 (260)
T ss_pred CCcccccCCCCCcCccCHHHHcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC-----CC----C
Confidence 2 2246778999998765 567889999999999999999999997654333322222111 11 1
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+.....++.+++.+||..||++||++.++++
T Consensus 225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 225 LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 12233347889999999999999999999975
No 345
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.6e-37 Score=272.69 Aligned_cols=245 Identities=18% Similarity=0.174 Sum_probs=187.7
Q ss_pred HHHHhcCCCCCCcee--eccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeec
Q 020027 55 EIDAATDGFSHRRII--GQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQA 130 (332)
Q Consensus 55 ~~~~~~~~~~~~~~l--g~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 130 (332)
+.....++|+..+.+ |+|+||.||++. ..++..+|+|.+....... .|+.....+ +|+|++++++.+..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEec
Confidence 334444566666666 999999999999 4678899999986542211 122222222 79999999999999
Q ss_pred CCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC-ceEEcc
Q 020027 131 PGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF-CARVCD 209 (332)
Q Consensus 131 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~d 209 (332)
++..+++|||+++++|.+++.... .+++..+..++.|+++|+.|||+. +++||||+|+||+++.++ .++++|
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG----KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEec
Confidence 999999999999999999997653 389999999999999999999998 999999999999999988 999999
Q ss_pred CCccccCCcc--cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHH-HHhhhcccccccCC
Q 020027 210 YGLSFLAPEE--KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWAL-PLIKEMRFSELLDP 286 (332)
Q Consensus 210 fg~a~~~~~~--~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~ 286 (332)
||++...... ..++..|++||.... ..++.++|+||||+++|||++|+.||......... ..+... . ..
T Consensus 154 fg~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~----~~ 225 (267)
T PHA03390 154 YGLCKIIGTPSCYDGTLDYFSPEKIKG---HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR-Q----QK 225 (267)
T ss_pred CccceecCCCccCCCCCcccChhhhcC---CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh-h----cc
Confidence 9998765433 357889999999876 56789999999999999999999999754322211 111110 0 11
Q ss_pred cCCCCCChHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 020027 287 RLAIPCEIKPLVRLAKVALACVGNSRKNRPS-IVQVAT 323 (332)
Q Consensus 287 ~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs-~~~i~~ 323 (332)
....+ ......+.+++.+||+.||.+||+ ++++++
T Consensus 226 ~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 KLPFI--KNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cCCcc--cccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 11111 123346889999999999999996 688874
No 346
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=6.7e-38 Score=284.71 Aligned_cols=253 Identities=18% Similarity=0.235 Sum_probs=190.8
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC------
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG------ 132 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 132 (332)
.++|...+.||+|+||.||+|. ..+|+.||+|.+............+.+|+.+++.++|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 4689999999999999999999 457999999998754332333335688999999999999999999886542
Q ss_pred ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCc
Q 020027 133 ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~ 212 (332)
..++++||+. .++..+... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMGH------PLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEecccc-cCHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 4589999996 467665531 278899999999999999999998 999999999999999999999999999
Q ss_pred cccCCccc---CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-c---------
Q 020027 213 SFLAPEEK---RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-R--------- 279 (332)
Q Consensus 213 a~~~~~~~---~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~--------- 279 (332)
++...... .++..|++||..... ..++.++|+|||||++|||++|+.||.+.........+... .
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 164 ARHADAEMTGYVVTRWYRAPEVILNW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CcCCCCCCCCceeeecccChhhhcCc--cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 87654332 456789999987542 45788999999999999999999999865432222211110 0
Q ss_pred -----cccccCCcCCCCC-C-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 280 -----FSELLDPRLAIPC-E-----IKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 280 -----~~~~~~~~~~~~~-~-----~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
...........+. . ......+.+++.+||+.||++|||++++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000000000 0 0122357799999999999999999999853
No 347
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-38 Score=301.78 Aligned_cols=258 Identities=18% Similarity=0.223 Sum_probs=179.6
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeC--CCCEEEEEEec--------------cCc-ccccccccHHHHHHHhccCCCCCc
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLS--TGKLVAVKRIH--------------PRL-VLSNAGFGFASVIKTLSLAQHPNI 121 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~--------------~~~-~~~~~~~~~~~e~~~l~~l~h~ni 121 (332)
..++|...+.||+|+||+||++..+ ++...+.|.+. +.. ........+.+|+.+++.++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4568999999999999999998742 22223322111 000 011112246789999999999999
Q ss_pred cceeeeeecCCceeEEEeccCCCCHHHHhcccCCC-CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeC
Q 020027 122 VPILGFSQAPGERIIVSEFINMASLDFYLHENNDG-ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLN 200 (332)
Q Consensus 122 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 200 (332)
+++++++...+..++++|++. +++..++...... ........+..++.|++.||.|||++ +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999999999999999999985 5677666432211 11133566778999999999999998 999999999999999
Q ss_pred CCCceEEccCCccccCCcc-------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCC-CCch---hHH
Q 020027 201 EKFCARVCDYGLSFLAPEE-------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRC-EEGL---LVK 269 (332)
Q Consensus 201 ~~~~~kl~dfg~a~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p-~~~~---~~~ 269 (332)
.++.+||+|||+++..... ..|+..|++||.+.. ..++.++|||||||++|||++|..+ +.+. ...
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG---DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC---CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 9999999999999754322 258899999999876 6789999999999999999998754 3321 111
Q ss_pred HHHHHhhhcc-----ccc-------ccCC-cCC-CCCC-------hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 270 WALPLIKEMR-----FSE-------LLDP-RLA-IPCE-------IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 270 ~~~~~~~~~~-----~~~-------~~~~-~~~-~~~~-------~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.....+.... +.+ .++. .+. .+.. ......+.+++.+|++.||++|||+.|+++
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1111111100 000 0000 000 0000 011224667889999999999999999986
No 348
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=5e-38 Score=277.02 Aligned_cols=243 Identities=23% Similarity=0.298 Sum_probs=196.3
Q ss_pred CCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccc-cccccHHHHHHHhccCC-CCCccceeeeeecCCceeEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQ-HPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 137 (332)
++|...+.||+|+||.||+|.. .+|+.||+|.+....... .....+.+|..++++++ |+||+++++++..++..+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 4688889999999999999994 589999999987643222 22335678899999998 99999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
||++++++|.+++.... .+++..+..++.|++.||.|||+. +++|+|++|+||+++.++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRKYG----SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 99999999999997653 389999999999999999999998 99999999999999999999999999886543
Q ss_pred ccc--------------------------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHH
Q 020027 218 EEK--------------------------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWA 271 (332)
Q Consensus 218 ~~~--------------------------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~ 271 (332)
... .++..|++||.... ...+.++|+||||++++|+++|+.||........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~---~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~ 230 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE---KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT 230 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCC---CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 221 35678999998765 5678899999999999999999999986543333
Q ss_pred HHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCH----HHHHH
Q 020027 272 LPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSI----VQVAT 323 (332)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~----~~i~~ 323 (332)
...+... ....+. .....+.+++.+||+.||++|||+ +++++
T Consensus 231 ~~~~~~~--------~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 231 FQKILKL--------EYSFPP--NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHhc--------CCCCCC--ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 2222211 111111 113367899999999999999999 76654
No 349
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.1e-37 Score=281.65 Aligned_cols=256 Identities=20% Similarity=0.240 Sum_probs=194.6
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec-CCcee
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA-PGERI 135 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~ 135 (332)
..+++|+..+.||+|+||.||++. ..+++.||+|.+............+.+|+.+++.++|||++++.+++.. .+..+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 457789999999999999999998 5589999999987544333333456789999999999999999998865 46788
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
+++||+ +++|..+++... +++.....++.|+++||.|||+. +++||||+|+||++++++.++++|||.+..
T Consensus 87 lv~e~~-~~~L~~~~~~~~-----~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 87 FVTELL-GTDLHRLLTSRP-----LEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEeehh-ccCHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 999998 568888876432 67788888999999999999998 999999999999999999999999999875
Q ss_pred CCcc---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh---------------
Q 020027 216 APEE---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE--------------- 277 (332)
Q Consensus 216 ~~~~---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~--------------- 277 (332)
.... ..++..|++||.+... ..++.++|+||||+++|||+||+.||.+.........+.+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd07856 158 QDPQMTGYVSTRYYRAPEIMLTW--QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS 235 (328)
T ss_pred cCCCcCCCcccccccCceeeecc--CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 4332 2457789999987542 4678999999999999999999999976433221111110
Q ss_pred cccccccCC-cCCCCCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 278 MRFSELLDP-RLAIPCE-----IKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 278 ~~~~~~~~~-~~~~~~~-----~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
....+.... ....+.+ .....++.+++.+||+.+|++|||+.+++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 236 ENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 0000001 1123478899999999999999999998754
No 350
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.8e-37 Score=274.27 Aligned_cols=252 Identities=19% Similarity=0.227 Sum_probs=191.8
Q ss_pred CCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeeeeecCCceeEEEec
Q 020027 63 FSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
|...+.||+|+||.||+|.. .+++.|++|.+...... .......+|+..+++++ |+|++++++++..++..+++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 56678899999999999995 46889999998754332 12223467888999998 99999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE- 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~- 219 (332)
+ +++|.+++.... ...+++..++.++.|++.+|.|||++ +++|+||+|+||++++++.++++|||.+......
T Consensus 80 ~-~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 80 M-EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred C-CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 9 788988886543 12379999999999999999999998 9999999999999999999999999998755432
Q ss_pred ----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh---cc----------ccc
Q 020027 220 ----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE---MR----------FSE 282 (332)
Q Consensus 220 ----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~---~~----------~~~ 282 (332)
..++..|++||..... ..++.++|+||||+++|||++|+.||.+.........+.. .. ...
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 154 PYTDYVSTRWYRAPEILLRS--TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred CcCCCCCcccccCceeeecC--cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 2467789999987542 4578899999999999999999999875533222111110 00 000
Q ss_pred ccCCcCCCC--CC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 283 LLDPRLAIP--CE-----IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 283 ~~~~~~~~~--~~-----~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..+...... .. ......+.+++.+||+.||++|||++|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000000 00 011346889999999999999999999875
No 351
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=6.7e-38 Score=285.02 Aligned_cols=259 Identities=20% Similarity=0.239 Sum_probs=195.2
Q ss_pred HHHHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC-
Q 020027 54 TEIDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP- 131 (332)
Q Consensus 54 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~- 131 (332)
..+...+++|...+.||+|+||.||+|. ..+++.||+|.+............+.+|+.+++.++|+||+++++++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 4556678899999999999999999998 56899999999875433222233467899999999999999999987543
Q ss_pred -----CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceE
Q 020027 132 -----GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCAR 206 (332)
Q Consensus 132 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 206 (332)
+..+++++++ +++|.+++... .+++..+..++.|++.|+.|||++ +++||||||+||++++++.+|
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEE
Confidence 3467888877 78898887643 278999999999999999999998 999999999999999999999
Q ss_pred EccCCccccCCccc---CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcc----
Q 020027 207 VCDYGLSFLAPEEK---RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMR---- 279 (332)
Q Consensus 207 l~dfg~a~~~~~~~---~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~---- 279 (332)
|+|||++....... .++..|++||.+... ..++.++|||||||++|||++|+.||...........+....
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (345)
T cd07877 161 ILDFGLARHTDDEMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 238 (345)
T ss_pred EecccccccccccccccccCCCccCHHHHhCc--cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99999987654332 467789999987542 457889999999999999999999986543322211111100
Q ss_pred ---c--------c---cccCCcCCCCC---ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 ---F--------S---ELLDPRLAIPC---EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 ---~--------~---~~~~~~~~~~~---~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
. . ..+........ ......++.+++.+|++.||++|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 0 0 00000000000 0012336779999999999999999999875
No 352
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.3e-37 Score=282.06 Aligned_cols=253 Identities=18% Similarity=0.186 Sum_probs=192.2
Q ss_pred CCCCC-CceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccc------------cccHHHHHHHhccCCCCCccceee
Q 020027 61 DGFSH-RRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA------------GFGFASVIKTLSLAQHPNIVPILG 126 (332)
Q Consensus 61 ~~~~~-~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~------------~~~~~~e~~~l~~l~h~niv~~~~ 126 (332)
++|.. .+.||+|+||.||+|. ..+++.||+|.++........ ...+.+|+.+++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45543 4679999999999999 457899999998754332210 113678999999999999999999
Q ss_pred eeecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceE
Q 020027 127 FSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCAR 206 (332)
Q Consensus 127 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 206 (332)
++...+..+++|||++ ++|.+++..... +++.....++.|++.||.|||+. +++|+||+|+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~----~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKIR----LTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 9999999999999996 688888865332 78899999999999999999998 999999999999999999999
Q ss_pred EccCCccccCCc--------------------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCch
Q 020027 207 VCDYGLSFLAPE--------------------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGL 266 (332)
Q Consensus 207 l~dfg~a~~~~~--------------------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~ 266 (332)
++|||++..... ...++..|++||..... ..++.++|+|||||++|||+||..||.+.
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA--EKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999998865430 11346679999987642 45689999999999999999999999866
Q ss_pred hHHHHHHHhhhc---c----cccccC-----C-cCCCCC-----ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 267 LVKWALPLIKEM---R----FSELLD-----P-RLAIPC-----EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 267 ~~~~~~~~~~~~---~----~~~~~~-----~-~~~~~~-----~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
........+... . +.+..+ + ....+. ......++.+++.+||+.||++|||++|++.
T Consensus 238 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 238 NEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 544333222110 0 000000 0 000000 0112346789999999999999999999985
No 353
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1e-37 Score=279.37 Aligned_cols=255 Identities=22% Similarity=0.266 Sum_probs=190.1
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC-------
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP------- 131 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------- 131 (332)
.++|...+.||+|+||.||+|. ..+++.+|+|.+............+.+|+..++.++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 5789999999999999999999 45789999999876543333333567899999999999999999987443
Q ss_pred -CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 132 -GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 132 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
...++++||+.+ ++...+.... ..+++..+..++.|+++||.|||++ +++|+||||+||++++++.++++||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS---VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 346899999964 6666665422 2389999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCccc-----------------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHH
Q 020027 211 GLSFLAPEEK-----------------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP 273 (332)
Q Consensus 211 g~a~~~~~~~-----------------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~ 273 (332)
|+++...... .++..|++||..... ..++.++|||||||++|||++|+.||.+........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~ 237 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE--RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLH 237 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCC--CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9986533211 235669999987542 457889999999999999999999997654433222
Q ss_pred Hhhhc-------cc------ccccC--CcCCCCCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 274 LIKEM-------RF------SELLD--PRLAIPCE-----IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 274 ~~~~~-------~~------~~~~~--~~~~~~~~-----~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+... .+ ....+ .....+.. ......+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 238 LIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 21110 00 00000 00000000 011236779999999999999999998875
No 354
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=294.82 Aligned_cols=247 Identities=23% Similarity=0.279 Sum_probs=200.9
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
.+.++-.||.|+||+||++. ..++-..|.|.+.... ..+-.+++-||.+|+..+||+||++++.+.-++.++|..||
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks--eEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS--EEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc--hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 34556679999999999998 4466677778776543 23334689999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC---
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP--- 217 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~--- 217 (332)
|.||-.+..+-..+. .+++.++..+++|++.||.|||++ +|+|||||..|||++-+|.++++|||.+....
T Consensus 111 C~GGAVDaimlEL~r---~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~ 184 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGR---VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR 184 (1187)
T ss_pred cCCchHhHHHHHhcc---ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHH
Confidence 999999988876554 389999999999999999999999 99999999999999999999999999985443
Q ss_pred ---cccCCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 218 ---EEKRGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 218 ---~~~~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
++..||+.|||||+..-. ...+|+.++||||||+.|.||..+.+|.+...+..+.-.+.... .|.+..|.
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe-----PPTLlqPS 259 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE-----PPTLLQPS 259 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC-----CCcccCcc
Confidence 344799999999987432 34689999999999999999999999988776655443332211 12233332
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
. =...+.+++.+|+..||..||+++++++
T Consensus 260 ~--Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 260 H--WSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred h--hhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 2 2336779999999999999999999875
No 355
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.9e-37 Score=276.19 Aligned_cols=252 Identities=20% Similarity=0.297 Sum_probs=191.2
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeC-CCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCCcee
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 135 (332)
...++|...+.||+|+||.||+|... +++.||+|.++..... .....+..|+..+.+. .|+||+++++++...+..+
T Consensus 12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~ 90 (296)
T cd06618 12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF 90 (296)
T ss_pred CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence 34567889999999999999999964 5899999998754322 1223456677666666 5999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhc-CCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQ-GVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
++|||++ +++..++..... .+++..+..++.|++.|+.|||+ . +++||||+|+||++++++.+||+|||++.
T Consensus 91 ~v~e~~~-~~l~~l~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~~ 163 (296)
T cd06618 91 ICMELMS-TCLDKLLKRIQG---PIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGISG 163 (296)
T ss_pred EEeeccC-cCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccch
Confidence 9999985 577776654322 37889999999999999999997 5 89999999999999999999999999986
Q ss_pred cCCcc-----cCCcccccCcccccccC-CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHH-HHHHHhhhcccccccCCc
Q 020027 215 LAPEE-----KRGLAGYVDDDYWHEKG-GGNATRESDVYGFGVVLLEILSGRRCEEGLLVK-WALPLIKEMRFSELLDPR 287 (332)
Q Consensus 215 ~~~~~-----~~~~~~~~~pe~~~~~~-~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 287 (332)
...+. ..++..|++||.+.... ...++.++|+||||+++|||++|+.||...... +....+.... .
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-------~ 236 (296)
T cd06618 164 RLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE-------P 236 (296)
T ss_pred hccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC-------C
Confidence 54322 23567899999986532 234788999999999999999999999753221 1211111111 0
Q ss_pred CCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 288 ~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
...+.......++.+++.+||+.||++|||+.++++.
T Consensus 237 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 237 PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0111111223478899999999999999999999754
No 356
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=278.18 Aligned_cols=242 Identities=19% Similarity=0.269 Sum_probs=203.2
Q ss_pred CCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEecc
Q 020027 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 141 (332)
|+....||+|+||.||++. ..+|..+|+|.+..+. ...++..|+.+|.+.+.|++|+++|.+.....+|||||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s----DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT----DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc----hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 5667789999999999998 5789999999986543 2335689999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc---
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE--- 218 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~--- 218 (332)
..|+..+.++.... .+++..+-.++..-++||+|||.. .-+|||||..|||++.+|.+|++|||.|..+.+
T Consensus 111 GAGSiSDI~R~R~K---~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 111 GAGSISDIMRARRK---PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred CCCcHHHHHHHhcC---CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHH
Confidence 99999999975433 388888889999999999999998 889999999999999999999999999976654
Q ss_pred ---ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChH
Q 020027 219 ---EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIK 295 (332)
Q Consensus 219 ---~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (332)
...||+.|||||+.+. -.|+.++||||+|+...||..|++||.+..+....-++.. .|......+..
T Consensus 185 KRNTVIGTPFWMAPEVI~E---IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT-------~PPPTF~KPE~ 254 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEE---IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPT-------KPPPTFKKPEE 254 (502)
T ss_pred hhCccccCcccccHHHHHH---hccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccC-------CCCCCCCChHh
Confidence 3369999999999988 5688999999999999999999999988765433222222 12222333444
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 296 PLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 296 ~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
-..++.+++++|+..+|++|-|+.++++.
T Consensus 255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 255 WSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred hhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 56688999999999999999999988763
No 357
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.1e-37 Score=283.36 Aligned_cols=256 Identities=21% Similarity=0.240 Sum_probs=193.9
Q ss_pred HHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC---
Q 020027 57 DAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG--- 132 (332)
Q Consensus 57 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--- 132 (332)
....++|+..+.||+|+||.||++. ..+|..||+|.+............+.+|+.+++.++||||+++++++..++
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 3456789999999999999999998 568999999998654322222334678999999999999999999886543
Q ss_pred ---ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEcc
Q 020027 133 ---ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCD 209 (332)
Q Consensus 133 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~d 209 (332)
..+++|||+ +++|..++... .+++..++.++.|++.|+.|||+. +++||||||+||++++++.++++|
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKHE-----KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 358999999 67898887642 278999999999999999999998 999999999999999999999999
Q ss_pred CCccccCCcc---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcc------c
Q 020027 210 YGLSFLAPEE---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMR------F 280 (332)
Q Consensus 210 fg~a~~~~~~---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~------~ 280 (332)
||++...... ..++..|++||.+... ..++.++|+||||+++|++++|+.||.+.........+.... +
T Consensus 162 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07880 162 FGLARQTDSEMTGYVVTRWYRAPEVILNW--MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEF 239 (343)
T ss_pred cccccccccCccccccCCcccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 9998765433 2467789999987642 357889999999999999999999997653322211110000 0
Q ss_pred ccccC-----------CcCCC----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 281 SELLD-----------PRLAI----PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 281 ~~~~~-----------~~~~~----~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+.+. +.... .........+.+++.+|++.||++|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 240 VQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 00000 000112335779999999999999999999883
No 358
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.9e-37 Score=280.30 Aligned_cols=253 Identities=23% Similarity=0.269 Sum_probs=196.1
Q ss_pred CCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC-----cee
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-----ERI 135 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 135 (332)
+|...+.||+|+||.||+|+. .+++.||+|.+............+.+|+..++.++|+||+++.+++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 477889999999999999995 46899999998765433333446789999999999999999999987765 789
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++|||++ ++|.+++.... .+++..++.++.|++.||.|||+. +++|+||||.||+++.++.++++|||++..
T Consensus 81 lv~e~~~-~~l~~~l~~~~----~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ----PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchh-hhHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 9999997 58888886543 388999999999999999999998 999999999999999999999999999865
Q ss_pred CCcc---------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcc--c----
Q 020027 216 APEE---------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMR--F---- 280 (332)
Q Consensus 216 ~~~~---------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~--~---- 280 (332)
.... ..++..|++||.+... ..++.++|+||||+++|+|++|+.||.+....+....+.... .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSS--SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230 (330)
T ss_pred ecccccccccccccccccCcCCceeeecc--cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhH
Confidence 4332 2357789999998763 278899999999999999999999998765443322221100 0
Q ss_pred ---------ccccC---CcCCCC---CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 281 ---------SELLD---PRLAIP---CEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 281 ---------~~~~~---~~~~~~---~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
...+. .....+ ........+.+++.+||+.||++|||+.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00000 000000 001123467899999999999999999999873
No 359
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.4e-37 Score=273.07 Aligned_cols=252 Identities=22% Similarity=0.246 Sum_probs=194.0
Q ss_pred CCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEecc
Q 020027 63 FSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 141 (332)
|+..+.||+|+||.||+|.. .+++.+|+|.+............+..|+.+++.++|+|++++++++...+..++++||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 45667899999999999994 56999999999866533333345678999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc-
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK- 220 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~- 220 (332)
+ ++|.+++.... ..+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 7 58999997653 2388999999999999999999998 99999999999999999999999999987543321
Q ss_pred -----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc-------cc---ccc--
Q 020027 221 -----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM-------RF---SEL-- 283 (332)
Q Consensus 221 -----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~-------~~---~~~-- 283 (332)
.++..|++||.+... ..++.++|+||||+++||+++|+.||.+.........+... .+ ...
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGS--KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred ccCccccCcCcCChHHhcCC--cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 345679999988652 37789999999999999999999999765433222111100 00 000
Q ss_pred cC---CcCCC-CC---ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 284 LD---PRLAI-PC---EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 284 ~~---~~~~~-~~---~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+ +.... .. .......+.+++.+||+.||++||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00 00000 00 0011346889999999999999999999875
No 360
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-38 Score=245.37 Aligned_cols=253 Identities=22% Similarity=0.183 Sum_probs=201.1
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+|+..+.||+|+||+||+|+ +.+++.||+|.++.+...+.......+||.+++.++|.|||++++....+....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 46677889999999999999 67899999999998766555555679999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK 220 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~ 220 (332)
|. .+|..|..+... .++...+..++.|+++|+.|+|++ ++.|||+||.|.|++.+|+.|++|||+++...-..
T Consensus 83 cd-qdlkkyfdslng---~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CD-QDLKKYFDSLNG---DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hh-HHHHHHHHhcCC---cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 95 688888876443 288899999999999999999999 99999999999999999999999999998654322
Q ss_pred ------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhh-------ccc---ccc
Q 020027 221 ------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKE-------MRF---SEL 283 (332)
Q Consensus 221 ------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~-------~~~---~~~ 283 (332)
.-|.-|.+|..+.+. .-|++..|+||.||++.|+.. |++.|.|...++.+..+-. ..+ ..+
T Consensus 156 rcysaevvtlwyrppdvlfga--kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred EeeeceeeeeeccCcceeeee--ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence 356788999888764 678999999999999999998 7777888877766554421 111 112
Q ss_pred cCCcCCCCCC---------hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 284 LDPRLAIPCE---------IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 284 ~~~~~~~~~~---------~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.|...-..++ ++-...=.+++++.+.-+|.+|.++++.++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 2221111111 111123347888888899999999998765
No 361
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.2e-37 Score=283.09 Aligned_cols=254 Identities=19% Similarity=0.239 Sum_probs=193.8
Q ss_pred hcCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCc----
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGE---- 133 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 133 (332)
..++|...+.||+|+||.||+|+. .+++.||+|.+............+.+|+.+++.++|+|++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 466899999999999999999995 578899999986543222233346789999999999999999998765544
Q ss_pred --eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCC
Q 020027 134 --RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211 (332)
Q Consensus 134 --~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg 211 (332)
.++++||+ +++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ-----KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 57999888642 278999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCcc---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcc---ccc---
Q 020027 212 LSFLAPEE---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMR---FSE--- 282 (332)
Q Consensus 212 ~a~~~~~~---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~---~~~--- 282 (332)
++...... ..++..|++||..... ..++.++|||||||++||++||+.||.+.........+.+.. ...
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (343)
T cd07851 164 LARHTDDEMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQ 241 (343)
T ss_pred ccccccccccCCcccccccCHHHHhCC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Confidence 98765432 2467789999987542 357889999999999999999999997654333222221100 000
Q ss_pred ---------ccCCcCCCC-CC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 283 ---------LLDPRLAIP-CE-----IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 283 ---------~~~~~~~~~-~~-----~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
......... .. ......+.+++.+||+.||++|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 242 KISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred hccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000000000 00 011347889999999999999999999875
No 362
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=6.4e-37 Score=277.19 Aligned_cols=252 Identities=21% Similarity=0.218 Sum_probs=186.0
Q ss_pred CCCCCceeeccCCeEEEEEEe-CC--CCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecC----Cc
Q 020027 62 GFSHRRIIGQGRLGTVYAALL-ST--GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAP----GE 133 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~-~~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~----~~ 133 (332)
+|...+.||+|+||.||++.. .+ +..||+|.+............+.+|+.+++++ +||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 467788999999999999994 34 78999999875433222233567899999988 599999999875332 45
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
.++++|++. ++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ----PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 788899985 68888886433 278999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCc----------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh------
Q 020027 214 FLAPE----------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE------ 277 (332)
Q Consensus 214 ~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~------ 277 (332)
+.... ...++..|++||..... ..++.++|+||+|+++|++++|+.||.+.........+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSF--QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPD 230 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCC
Confidence 64331 12467889999987542 4578999999999999999999999875432222111100
Q ss_pred ---------cccccc---cC--CcCCCC-CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 278 ---------MRFSEL---LD--PRLAIP-CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 278 ---------~~~~~~---~~--~~~~~~-~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...... .. +....+ ........+.+++.+||+.||++|||+.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 231 EETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000 00 000000 00112346789999999999999999999864
No 363
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.3e-37 Score=272.98 Aligned_cols=248 Identities=21% Similarity=0.205 Sum_probs=189.0
Q ss_pred CCCCCceeeccCCeEEEEEEe----CCCCEEEEEEeccCccccc--ccccHHHHHHHhccC-CCCCccceeeeeecCCce
Q 020027 62 GFSHRRIIGQGRLGTVYAALL----STGKLVAVKRIHPRLVLSN--AGFGFASVIKTLSLA-QHPNIVPILGFSQAPGER 134 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~--~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 134 (332)
+|+..+.||+|+||.||.++. .+|+.||+|.++....... ....+.+|+.+++.+ +|+||+++++.+..++..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477788999999999999984 4789999999875432221 223467899999999 599999999999998999
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
++++||+++++|.+++..... +++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~----l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQRER----FKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 999999999999999876432 78888999999999999999998 99999999999999999999999999986
Q ss_pred cCCcc-------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCc
Q 020027 215 LAPEE-------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287 (332)
Q Consensus 215 ~~~~~-------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (332)
..... ..++..|++||...... ..++.++||||||+++||++||..||...........+... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~----~~~~~ 228 (290)
T cd05613 154 EFHEDEVERAYSFCGTIEYMAPDIVRGGD-GGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRR----ILKSE 228 (290)
T ss_pred ecccccccccccccCCcccCChhhccCCC-CCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHH----hhccC
Confidence 54331 23678899999876421 34578999999999999999999998632111111111110 00001
Q ss_pred CCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 020027 288 LAIPCEIKPLVRLAKVALACVGNSRKNRP-----SIVQVAT 323 (332)
Q Consensus 288 ~~~~~~~~~~~~l~~l~~~c~~~dp~~RP-----s~~~i~~ 323 (332)
... +......+.+++.+||+.||++|| ++.+++.
T Consensus 229 ~~~--~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 PPY--PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred CCC--CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 111 112233677999999999999997 5666544
No 364
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.2e-37 Score=279.46 Aligned_cols=250 Identities=21% Similarity=0.234 Sum_probs=187.5
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC--------
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP-------- 131 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-------- 131 (332)
.+|...+.||.|+||.||+|. ..+|+.||+|.+..... .....+.+|+.+++.++||||+++++.+...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 578889999999999999999 46789999999865432 2233468899999999999999999876543
Q ss_pred ------CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeC-CCCc
Q 020027 132 ------GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLN-EKFC 204 (332)
Q Consensus 132 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~~ 204 (332)
...++++||++ ++|.+++... .+++..+..++.|++.||.|||+. +++||||||+||+++ +++.
T Consensus 83 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 83 GSLTELNSVYIVQEYME-TDLANVLEQG-----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred ccccccceEEEEeeccc-ccHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 35789999997 5888887543 278899999999999999999998 999999999999997 4567
Q ss_pred eEEccCCccccCCc---------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHh
Q 020027 205 ARVCDYGLSFLAPE---------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLI 275 (332)
Q Consensus 205 ~kl~dfg~a~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~ 275 (332)
+|++|||.+..... ...++..|+|||.+... ..++.++|||||||++|||++|+.||.+..........
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~ 231 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSP--NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLI 231 (342)
T ss_pred EEECCcccceecCCccccccccccccccccccCHHHHhCc--cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 89999999865321 12356789999986542 45788999999999999999999999765433222221
Q ss_pred hhcc--------------cccccC-CcCCCCCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 276 KEMR--------------FSELLD-PRLAIPCE-----IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 276 ~~~~--------------~~~~~~-~~~~~~~~-----~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.... ...... .......+ .....++.+++.+||+.||++|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 232 LESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 1100 000000 00000000 012246779999999999999999999974
No 365
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=4.1e-37 Score=272.86 Aligned_cols=252 Identities=20% Similarity=0.207 Sum_probs=192.0
Q ss_pred CCCCCceeeccCCeEEEEEEe----CCCCEEEEEEeccCccc--ccccccHHHHHHHhccC-CCCCccceeeeeecCCce
Q 020027 62 GFSHRRIIGQGRLGTVYAALL----STGKLVAVKRIHPRLVL--SNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGER 134 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 134 (332)
+|...+.||+|+||.||++.. .+++.||+|.++..... ......+.+|+.++..+ +|||++++++.+...+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367788999999999999873 36789999998753321 12223467899999999 599999999999988999
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
+++|||+++++|.+++.... .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++++|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE----HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 99999999999999886532 278888999999999999999998 99999999999999999999999999986
Q ss_pred cCCcc-------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCc
Q 020027 215 LAPEE-------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPR 287 (332)
Q Consensus 215 ~~~~~-------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (332)
..... ..++..|++||...... ...+.++|+||||+++|||+||..||...........+... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~ 228 (288)
T cd05583 154 EFLAEEEERAYSFCGTIEYMAPEVIRGGS-GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRR----ILKSK 228 (288)
T ss_pred ccccccccccccccCCccccCHHHhcCCC-CCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHH----HHccC
Confidence 53321 24678899999876521 23678999999999999999999998532111111111110 00111
Q ss_pred CCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 020027 288 LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNN 327 (332)
Q Consensus 288 ~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~ 327 (332)
...+. .....+.+++.+||+.||++|||+.++.+.|+-
T Consensus 229 ~~~~~--~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 229 PPFPK--TMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred CCCCc--ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 11111 122367789999999999999999888776653
No 366
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=8.4e-37 Score=264.91 Aligned_cols=232 Identities=23% Similarity=0.207 Sum_probs=189.0
Q ss_pred eeccCCeEEEEEEe-CCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCH
Q 020027 69 IGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASL 146 (332)
Q Consensus 69 lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 146 (332)
||+|+||.||++.. .+++.+|+|.+........ ....+..|+.+++.++|+|++++++.+..++..+++||++++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999995 4689999999876543222 223578899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc------c
Q 020027 147 DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE------K 220 (332)
Q Consensus 147 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~------~ 220 (332)
.+++.... .+++.....++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||.+...... .
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (250)
T cd05123 81 FSHLSKEG----RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTF 153 (250)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCC
Confidence 99997653 278999999999999999999998 9999999999999999999999999998665432 2
Q ss_pred CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHH
Q 020027 221 RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRL 300 (332)
Q Consensus 221 ~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (332)
.++..|++||.... ...+.++|+||||+++||+++|..||...........+.. .....+. .....+
T Consensus 154 ~~~~~~~~Pe~~~~---~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--------~~~~~~~--~~~~~l 220 (250)
T cd05123 154 CGTPEYLAPEVLLG---KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--------DPLRFPE--FLSPEA 220 (250)
T ss_pred cCCccccChHHhCC---CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--------CCCCCCC--CCCHHH
Confidence 46788999998865 5578899999999999999999999976544333222222 1111211 123477
Q ss_pred HHHHHHcccCCCCCCCCHHH
Q 020027 301 AKVALACVGNSRKNRPSIVQ 320 (332)
Q Consensus 301 ~~l~~~c~~~dp~~RPs~~~ 320 (332)
.+++.+||..||++|||+.+
T Consensus 221 ~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 221 RDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHhcCCHhhCCCccc
Confidence 89999999999999999954
No 367
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-38 Score=288.71 Aligned_cols=260 Identities=22% Similarity=0.285 Sum_probs=196.5
Q ss_pred CCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC------cee
Q 020027 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG------ERI 135 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~ 135 (332)
....+.||+|+||.||+|+ ..+|+.||||.+++... ........+|++++++++|+|||++++.-++.. ...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~-~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS-LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcc-cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 3455789999999999999 77999999999987552 233335689999999999999999999875543 568
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeC--CCC--ceEEccCC
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLN--EKF--CARVCDYG 211 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~--~~~--~~kl~dfg 211 (332)
++||||.+|+|...+++..+ ...+++...+.++..++.||.|||++ +|+||||||.||++. .+| --||+|||
T Consensus 94 lvmEyC~gGsL~~~L~~PEN-~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPEN-AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred EEEeecCCCcHHHHhcCccc-ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 99999999999999987544 34589999999999999999999999 999999999999984 334 36999999
Q ss_pred ccccCCccc-----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH----HHH-HHHhhhcc--
Q 020027 212 LSFLAPEEK-----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV----KWA-LPLIKEMR-- 279 (332)
Q Consensus 212 ~a~~~~~~~-----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~----~~~-~~~~~~~~-- 279 (332)
.|+-.++.. .||..|.+||.+... ..|+..+|.|||||++||++||..||..... .+. +..+....
T Consensus 170 ~Arel~d~s~~~S~vGT~~YLhPel~E~q--~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 170 AARELDDNSLFTSLVGTEEYLHPELYERQ--KKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred ccccCCCCCeeeeecCchhhcChHHHhhc--cCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 999887654 699999999999852 7889999999999999999999999853211 111 11111110
Q ss_pred c----cc------ccCCcCCCCCC--hHHHHHHHHHHHHcccCCCCCCC--CHHHHHHHHhccc
Q 020027 280 F----SE------LLDPRLAIPCE--IKPLVRLAKVALACVGNSRKNRP--SIVQVATILNNLV 329 (332)
Q Consensus 280 ~----~~------~~~~~~~~~~~--~~~~~~l~~l~~~c~~~dp~~RP--s~~~i~~~L~~~~ 329 (332)
. .+ .....++.+.. ..-...+..++...+..||.+|- .+.+....+..++
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL 311 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDIL 311 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHH
Confidence 0 00 00112222222 22334566778888888888888 6666666655544
No 368
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-38 Score=259.06 Aligned_cols=248 Identities=20% Similarity=0.301 Sum_probs=191.8
Q ss_pred CCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 139 (332)
+.+....||.|+.|.|++++ ..+|...|||.+...... .+..+++..+.++.+- +.|.||+.+|+|..+...++.||
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nk-ee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCH-HHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 44455679999999999999 568999999999765432 2233456666666554 48999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
.|. -.++.+++.-.. ++++..+=++..-+..||.||-+++ +|+|||+||+|||+|+.|++|+||||++....++
T Consensus 172 lMs-~C~ekLlkrik~---piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRIKG---PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHH-HHHHHHHHHhcC---CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc
Confidence 984 456666654332 2777777788889999999998764 9999999999999999999999999998654433
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHH-HHHHHhhhcccccccCCcCCCCCC
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVK-WALPLIKEMRFSELLDPRLAIPCE 293 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 293 (332)
..|.+.|||||.+..+....|+-++||||||+.++||.||..||.+...+ +++..+.+.. ...+++...
T Consensus 246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~e-PP~L~~~~g---- 320 (391)
T KOG0983|consen 246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEE-PPLLPGHMG---- 320 (391)
T ss_pred cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcC-CCCCCcccC----
Confidence 36889999999998766678999999999999999999999999985332 3333333311 112222111
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 294 IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 294 ~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
-...+.+++..|+..|+.+||...++++
T Consensus 321 --FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 321 --FSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred --cCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 2236778999999999999999998875
No 369
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3e-38 Score=265.86 Aligned_cols=201 Identities=20% Similarity=0.239 Sum_probs=168.3
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeC---C--CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec-CC
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLS---T--GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA-PG 132 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~---~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~ 132 (332)
....|+....||+|+||.||++..+ + .+.+|+|+++........+....+|+..++.++|||++.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3457889999999999999999622 2 2379999998776555555667899999999999999999998876 78
Q ss_pred ceeEEEeccCCCCHHHHhcccCCC-CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC----CceEE
Q 020027 133 ERIIVSEFINMASLDFYLHENNDG-ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK----FCARV 207 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~----~~~kl 207 (332)
..++++||.+. +|...|+-+... ...++...+..|+.||+.|+.|||++ -|.||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 89999999975 888888754321 23478889999999999999999999 89999999999999876 89999
Q ss_pred ccCCccccCCccc---------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCc
Q 020027 208 CDYGLSFLAPEEK---------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265 (332)
Q Consensus 208 ~dfg~a~~~~~~~---------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~ 265 (332)
+|||+++...+.. .-|.-|.|||.+.+. ..||++.||||.|||+.||+|-++.|.+
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa--~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGA--RHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhccc--ccccchhhhHHHHHHHHHHHccCccccc
Confidence 9999998654332 357789999999875 7899999999999999999998776654
No 370
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=272.61 Aligned_cols=247 Identities=21% Similarity=0.256 Sum_probs=199.2
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccc-cccHHHHHHHhccCCCCCccceeeeeecCCcee
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNA-GFGFASVIKTLSLAQHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 135 (332)
...+.|..-++||+|+||.||-+. ..+|+.+|.|.+.+.....+. ....++|-.++.+++.+-||.+--.+++.+.++
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 445678888999999999999998 569999999999765543332 234678999999999999999988899999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
+|+..|.||+|.-.|...+. ..+++..++.++.+|+.||.+||.. +||.|||||+|||+|++|.++|+|+|+|..
T Consensus 262 lVLtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAve 336 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVE 336 (591)
T ss_pred EEEEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEe
Confidence 99999999999988877654 3499999999999999999999999 999999999999999999999999999976
Q ss_pred CCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCC
Q 020027 216 APEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAI 290 (332)
Q Consensus 216 ~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
.++. ..||.+|||||.+.. ..|+...|.||+||++|||+.|+.||.......-...+..... ......
T Consensus 337 i~~g~~~~~rvGT~GYMAPEvl~n---e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~----~~~~ey 409 (591)
T KOG0986|consen 337 IPEGKPIRGRVGTVGYMAPEVLQN---EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTL----EDPEEY 409 (591)
T ss_pred cCCCCccccccCcccccCHHHHcC---CcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHh----cchhhc
Confidence 6543 379999999999988 6699999999999999999999999976533222212222111 111111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCH
Q 020027 291 PCEIKPLVRLAKVALACVGNSRKNRPSI 318 (332)
Q Consensus 291 ~~~~~~~~~l~~l~~~c~~~dp~~RPs~ 318 (332)
+.+-..++.++-...++.||.+|--.
T Consensus 410 --~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 410 --SDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred --ccccCHHHHHHHHHHHccCHHHhccC
Confidence 12223356677778999999999643
No 371
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=7.8e-36 Score=291.89 Aligned_cols=148 Identities=25% Similarity=0.349 Sum_probs=129.1
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
.++|...+.||+|+||.||+|.. .+++.||+|+++....... ....+..|+..++.++|+||+++++.+...+..+++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 36788899999999999999994 4789999999975432221 123568889999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
|||+++++|.+++..... +++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~~----l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGY----FDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999975432 78888999999999999999998 99999999999999999999999999864
No 372
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-37 Score=296.68 Aligned_cols=255 Identities=20% Similarity=0.231 Sum_probs=210.8
Q ss_pred HHHHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccc-cccccHHHHHHHhccCCCCCccceeeeeecC
Q 020027 54 TEIDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLS-NAGFGFASVIKTLSLAQHPNIVPILGFSQAP 131 (332)
Q Consensus 54 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 131 (332)
.++....++|.+.++||+|+||.|..++ .++++.+|.|++.+..... .....|..|-.+|..-+.+.|+.++=.|.++
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 4556678899999999999999999999 5789999999998754432 2333578888999988999999999999999
Q ss_pred CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCC
Q 020027 132 GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYG 211 (332)
Q Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg 211 (332)
..+|+||||++||+|-.++..... +++..+..++..|+-||.-+|+. |+||||+||.|||+|..|.+|++|||
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~~----~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFDR----LPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcCC----ChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccch
Confidence 999999999999999999987652 78888999999999999999998 99999999999999999999999999
Q ss_pred ccccCC-------cccCCcccccCcccccccCC--CCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhccccc
Q 020027 212 LSFLAP-------EEKRGLAGYVDDDYWHEKGG--GNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSE 282 (332)
Q Consensus 212 ~a~~~~-------~~~~~~~~~~~pe~~~~~~~--~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 282 (332)
.+.... ....|||.|++||.+...++ +.|++.+|.||+||++|||+.|..||.....-+.+..+.+-
T Consensus 221 sClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h---- 296 (1317)
T KOG0612|consen 221 SCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH---- 296 (1317)
T ss_pred hHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch----
Confidence 875443 23479999999999987643 57999999999999999999999999876555555444332
Q ss_pred ccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCC---HHHHH
Q 020027 283 LLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPS---IVQVA 322 (332)
Q Consensus 283 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs---~~~i~ 322 (332)
...+..|.....+.+..++|.+.+. +|+.|.. ++++-
T Consensus 297 --k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 297 --KESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred --hhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 1234455445566678899988775 8888887 66654
No 373
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=268.27 Aligned_cols=257 Identities=19% Similarity=0.193 Sum_probs=201.5
Q ss_pred HHHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCC--C----Cccceeee
Q 020027 55 EIDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--P----NIVPILGF 127 (332)
Q Consensus 55 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~----niv~~~~~ 127 (332)
..+..+++|.+.+.+|+|+||.|.++. ..++..||+|+++.-....+ +..-|+.++.++.+ | -+|.+.+|
T Consensus 83 ~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYre---Aa~iEi~vLqki~~~DP~g~~rcv~m~~w 159 (415)
T KOG0671|consen 83 VGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYRE---AALIEIEVLQKINESDPNGKFRCVQMRDW 159 (415)
T ss_pred eccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhh---HHHHHHHHHHHHHhcCCCCceEEEeeehh
Confidence 344557889999999999999999998 55789999999985443322 34678888888842 2 46788889
Q ss_pred eecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC------
Q 020027 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE------ 201 (332)
Q Consensus 128 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~------ 201 (332)
+.-.++.+|++|.+ |.++.+++..+.- ..++..++..|+.|++++++|||+. +++|-||||+|||+.+
T Consensus 160 FdyrghiCivfell-G~S~~dFlk~N~y--~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 160 FDYRGHICIVFELL-GLSTFDFLKENNY--IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred hhccCceEEEEecc-ChhHHHHhccCCc--cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 99999999999998 6799999987644 3488999999999999999999999 9999999999999832
Q ss_pred --------------CCceEEccCCccccCCccc---CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 020027 202 --------------KFCARVCDYGLSFLAPEEK---RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEE 264 (332)
Q Consensus 202 --------------~~~~kl~dfg~a~~~~~~~---~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~ 264 (332)
+..+++.|||.|....+.. ..|..|.|||.+.+ ..++.++||||+||||.|+.||...|+
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLg---LGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILG---LGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheec---cCcCCccCceeeeeEEEEeeccceecc
Confidence 2358999999998776554 68999999999988 788999999999999999999999887
Q ss_pred chhHHHHHHHhhh--ccccc---------------ccC------Cc-----C--------CCCCChHHHHHHHHHHHHcc
Q 020027 265 GLLVKWALPLIKE--MRFSE---------------LLD------PR-----L--------AIPCEIKPLVRLAKVALACV 308 (332)
Q Consensus 265 ~~~~~~~~~~~~~--~~~~~---------------~~~------~~-----~--------~~~~~~~~~~~l~~l~~~c~ 308 (332)
+....+.+.++.. +++.. .+| .+ . .......+..++++|+.+++
T Consensus 311 tHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL 390 (415)
T KOG0671|consen 311 THENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRML 390 (415)
T ss_pred cCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHH
Confidence 7655453333321 11100 000 00 0 01122355678999999999
Q ss_pred cCCCCCCCCHHHHHH
Q 020027 309 GNSRKNRPSIVQVAT 323 (332)
Q Consensus 309 ~~dp~~RPs~~~i~~ 323 (332)
.+||.+|+|+.|+++
T Consensus 391 ~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 391 EFDPARRITLREALS 405 (415)
T ss_pred ccCccccccHHHHhc
Confidence 999999999999875
No 374
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=4.3e-36 Score=258.95 Aligned_cols=217 Identities=15% Similarity=0.126 Sum_probs=171.8
Q ss_pred cCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCHHHHh
Q 020027 72 GRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYL 150 (332)
Q Consensus 72 G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l 150 (332)
|.||.||+++ ..+++.+|+|.++... .+.+|...+....|||++++++++...+..+++|||+++++|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 8999999999 5688999999987542 1233444455567999999999999999999999999999999998
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc---cCCccccc
Q 020027 151 HENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE---KRGLAGYV 227 (332)
Q Consensus 151 ~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~---~~~~~~~~ 227 (332)
..... +++..+..++.|++.||.|||+. +++||||||+||+++.++.++++|||.+...... ..++..|+
T Consensus 77 ~~~~~----l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~ 149 (237)
T cd05576 77 SKFLN----IPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYC 149 (237)
T ss_pred HHhcC----CCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCcccc
Confidence 75432 78999999999999999999998 9999999999999999999999999987654432 23456799
Q ss_pred CcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHc
Q 020027 228 DDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALAC 307 (332)
Q Consensus 228 ~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 307 (332)
+||.... ..++.++|+||+|+++||+++|+.|+....... ... ..+..+. .....+.+++.+|
T Consensus 150 aPE~~~~---~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----~~~-------~~~~~~~--~~~~~~~~li~~~ 212 (237)
T cd05576 150 APEVGGI---SEETEACDWWSLGAILFELLTGKTLVECHPSGI-----NTH-------TTLNIPE--WVSEEARSLLQQL 212 (237)
T ss_pred CCcccCC---CCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-----ccc-------cccCCcc--cCCHHHHHHHHHH
Confidence 9998765 567889999999999999999998765432110 000 0011111 1223678999999
Q ss_pred ccCCCCCCCCHH
Q 020027 308 VGNSRKNRPSIV 319 (332)
Q Consensus 308 ~~~dp~~RPs~~ 319 (332)
|+.||++|||+.
T Consensus 213 l~~dp~~R~~~~ 224 (237)
T cd05576 213 LQFNPTERLGAG 224 (237)
T ss_pred ccCCHHHhcCCC
Confidence 999999999974
No 375
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-38 Score=259.74 Aligned_cols=254 Identities=24% Similarity=0.294 Sum_probs=192.3
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhc-cCCCCCccceeeeeecCCceeEEE
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLS-LAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
++.+....||.|+||+|++-. .++|+..|||+++.... ..+..+++.|..... .-+.||||+++|.+..++..|+.|
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCM 142 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICM 142 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeH
Confidence 456667789999999999988 57899999999986654 233345777877554 447899999999999999999999
Q ss_pred eccCCCCHHHHhccc-CCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 139 EFINMASLDFYLHEN-NDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 139 e~~~~~~L~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|+|+ .+++.+-+.. .-....+++...-.|..-...||.||-... .|+|||+||+|||++..|.+|+||||++..+.
T Consensus 143 ELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 143 ELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred HHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 9995 5665543321 111223677777777777889999998763 89999999999999999999999999987665
Q ss_pred ccc-----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH-HHHHHHhhhcccccccCCcCCCC
Q 020027 218 EEK-----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV-KWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 218 ~~~-----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
++. .|...|||||...... ..|+-+||+||+|+.|+|+.||..|+.+... -+....+..+....+..+.-
T Consensus 220 ~SiAkT~daGCrpYmAPERi~p~~-~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~--- 295 (361)
T KOG1006|consen 220 DSIAKTVDAGCRPYMAPERIDPSD-KGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKE--- 295 (361)
T ss_pred HHHHhhhccCCccccChhccCCcc-CCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCccc---
Confidence 443 6788999999987642 3589999999999999999999999987543 22333333333222211111
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.......+..++..|+..|...||...++..
T Consensus 296 -~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 296 -CVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred -ccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 1223457889999999999999999998764
No 376
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-37 Score=269.11 Aligned_cols=252 Identities=22% Similarity=0.290 Sum_probs=196.0
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccc-----cHHHHHHHhccCCCCCccceeeeeec-CCc
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGF-----GFASVIKTLSLAQHPNIVPILGFSQA-PGE 133 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~-----~~~~e~~~l~~l~h~niv~~~~~~~~-~~~ 133 (332)
++|-.+.+||+|||+.||++. +...+.||+|+-.......++.. ...+|..+.+.++||.||++++++.- .+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 456666889999999999999 66778999998765443332221 25789999999999999999999854 567
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeC---CCCceEEccC
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLN---EKFCARVCDY 210 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~---~~~~~kl~df 210 (332)
+|-|+|||+|.+|+-|++++.. +++..+..|+.||+.||.||.+. .++|+|-||||.|||+. ..|.+||.||
T Consensus 543 FCTVLEYceGNDLDFYLKQhkl----mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKL----MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhh----hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 8899999999999999998764 88999999999999999999986 77899999999999995 4678999999
Q ss_pred CccccCCccc-------------CCcccccCccccccc-CCCCCCchhhhHHHHHHHHHHHhCCCCCCchh-HHHHHHHh
Q 020027 211 GLSFLAPEEK-------------RGLAGYVDDDYWHEK-GGGNATRESDVYGFGVVLLEILSGRRCEEGLL-VKWALPLI 275 (332)
Q Consensus 211 g~a~~~~~~~-------------~~~~~~~~pe~~~~~-~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~-~~~~~~~~ 275 (332)
|+++...... .||.-|.+||.+... +...++.++||||.|||+|.++.|+.||.... ...++
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdIL--- 694 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDIL--- 694 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHH---
Confidence 9998765432 578889999988653 34678999999999999999999999997542 22222
Q ss_pred hhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 020027 276 KEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVA 322 (332)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~ 322 (332)
.+......- ....|..+-...+..++|++|+++--++|.+..++.
T Consensus 695 qeNTIlkAt--EVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 695 QENTILKAT--EVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hhhchhcce--eccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 222211111 112222233344677999999999999998877654
No 377
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=257.91 Aligned_cols=237 Identities=22% Similarity=0.317 Sum_probs=199.5
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccc-cHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~-~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
.++|+.+++||+|.||+|..++ ..+|+.+|+|++++......... .-..|-+++...+||-+..+.-.++..+++++|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 4689999999999999999999 67999999999987765443322 356788899999999999998889999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
|||..||.|...+.... .+++.....+...|..||.|||++ +||.||||.+|.|+|.+|.+||+|||+++..-
T Consensus 247 MeyanGGeLf~HLsrer----~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER----VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEccCceEeeehhhhh----cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc
Confidence 99999999988776543 378888888999999999999999 99999999999999999999999999986432
Q ss_pred ------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 218 ------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 218 ------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
...+||+.|.|||.+.. ..|..++|.|.+||++|||++|+.||.....+.....+..+ .++.|
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleD---nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e--------d~kFP 388 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLED---NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME--------DLKFP 388 (516)
T ss_pred cccceeccccCChhhcCchhhcc---ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh--------hccCC
Confidence 23479999999999988 68899999999999999999999999988777666665443 22333
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCC
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRP 316 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RP 316 (332)
..... +...++...+..||++|.
T Consensus 389 r~ls~--eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 389 RTLSP--EAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred ccCCH--HHHHHHHHHhhcChHhhc
Confidence 33222 566888899999999995
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=254.67 Aligned_cols=245 Identities=19% Similarity=0.192 Sum_probs=192.7
Q ss_pred cCCCCCC-ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeec----CC
Q 020027 60 TDGFSHR-RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQA----PG 132 (332)
Q Consensus 60 ~~~~~~~-~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~ 132 (332)
+++|.+. ++||-|-.|.|..+. ..+|+.+|+|++... ....+|+...-.. .|||||++++++.. ..
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 4566554 579999999999998 568999999998622 2347787766554 69999999998754 35
Q ss_pred ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC---CCceEEcc
Q 020027 133 ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE---KFCARVCD 209 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~d 209 (332)
.+.+|||.++||.|...+.+.+.. .+++.++-.|+.||+.|+.|||+. +|.||||||+|+|... |..+|++|
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~--afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQ--AFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecc
Confidence 678999999999999999876554 389999999999999999999999 9999999999999964 56799999
Q ss_pred CCccccCCc-----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhccccccc
Q 020027 210 YGLSFLAPE-----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELL 284 (332)
Q Consensus 210 fg~a~~~~~-----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 284 (332)
||+|+...+ ..+-|+.|.|||.+.. ..|+..+|+||+||++|-|++|.+||........-+.++. .+-
T Consensus 208 fGFAK~t~~~~~L~TPc~TPyYvaPevlg~---eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~----rI~ 280 (400)
T KOG0604|consen 208 FGFAKETQEPGDLMTPCFTPYYVAPEVLGP---EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKR----RIR 280 (400)
T ss_pred cccccccCCCccccCCcccccccCHHHhCc---hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHh----Hhh
Confidence 999986553 2367899999999876 5789999999999999999999999975433222122211 111
Q ss_pred CC--cCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 285 DP--RLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 285 ~~--~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.. .++.+.....++...++++..+..+|.+|.|+.++.+
T Consensus 281 ~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 281 TGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 12 2333344455667779999999999999999998864
No 379
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-36 Score=273.21 Aligned_cols=235 Identities=21% Similarity=0.202 Sum_probs=191.9
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCCceeEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 137 (332)
+++|.....+|.|+|+.|-.+. ..+++..++|++..... +..+|+.++... +|||++++.+.+.+....++|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v 394 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV 394 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceecCCceeeee
Confidence 6678888889999999998888 67888999999976521 224455444444 799999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEe-CCCCceEEccCCccccC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILL-NEKFCARVCDYGLSFLA 216 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill-~~~~~~kl~dfg~a~~~ 216 (332)
||.+.++-+.+-+..... ....+..++.+|+.|+.|||++ |+|||||||+|||+ ++.++++|+|||.++..
T Consensus 395 ~e~l~g~ell~ri~~~~~-----~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 395 MELLDGGELLRRIRSKPE-----FCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSEL 466 (612)
T ss_pred ehhccccHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhC
Confidence 999999888777765432 2256667999999999999999 99999999999999 68999999999999887
Q ss_pred Ccc---cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHH-HHHHHhhhcccccccCCcCCCCC
Q 020027 217 PEE---KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVK-WALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 217 ~~~---~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
... .+-|..|.|||.... ..++++||+||||++||+|++|+.||.....+ +....+..+++.
T Consensus 467 ~~~~~tp~~t~~y~APEvl~~---~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s----------- 532 (612)
T KOG0603|consen 467 ERSCDTPALTLQYVAPEVLAI---QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS----------- 532 (612)
T ss_pred chhhcccchhhcccChhhhcc---CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc-----------
Confidence 655 355789999999885 78999999999999999999999999866544 444444443322
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
......+.+|+.+||+.||.+||++.++..
T Consensus 533 -~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 533 -ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred -cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 233346779999999999999999999864
No 380
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=270.57 Aligned_cols=239 Identities=22% Similarity=0.258 Sum_probs=194.7
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMAS 145 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 145 (332)
++||+|.||+||-|+ .++|+.||||.+.+..-..++.....+|+.++.+++||.||.+.-.|+.++..++|||-+. |+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-ch
Confidence 689999999999999 6799999999998877666666678999999999999999999999999999999999996 45
Q ss_pred HHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC---CCceEEccCCccccCCccc--
Q 020027 146 LDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE---KFCARVCDYGLSFLAPEEK-- 220 (332)
Q Consensus 146 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~dfg~a~~~~~~~-- 220 (332)
..+++-+...+ .+++..-..+..||+.||+|||.+ +|+|+||||+|||+.+ ...+||||||+|+..++..
T Consensus 649 MLEMILSsEkg--RL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR 723 (888)
T KOG4236|consen 649 MLEMILSSEKG--RLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR 723 (888)
T ss_pred HHHHHHHhhcc--cchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhhhh
Confidence 55554332222 278888888999999999999999 9999999999999964 4589999999999988754
Q ss_pred ---CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHH
Q 020027 221 ---RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPL 297 (332)
Q Consensus 221 ---~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
.||+.|.|||.+.. +.|+..-|+||.|||+|--++|..||... +++-+.+.+..+.- +.....+-.
T Consensus 724 rsVVGTPAYLaPEVLrn---kGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMy------Pp~PW~eis 792 (888)
T KOG4236|consen 724 RSVVGTPAYLAPEVLRN---KGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMY------PPNPWSEIS 792 (888)
T ss_pred hhhcCCccccCHHHHhh---ccccccccceeeeEEEEEEecccccCCCc--cchhHHhhcccccc------CCCchhhcC
Confidence 69999999999998 67888999999999999999999999653 22333333322211 111122334
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHH
Q 020027 298 VRLAKVALACVGNSRKNRPSIVQVA 322 (332)
Q Consensus 298 ~~l~~l~~~c~~~dp~~RPs~~~i~ 322 (332)
....++|...++..-.+|-|....+
T Consensus 793 ~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 793 PEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred HHHHHHHHHHHHHHHHHhcchHhhc
Confidence 4678999999999999999887654
No 381
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-36 Score=252.12 Aligned_cols=248 Identities=20% Similarity=0.247 Sum_probs=194.4
Q ss_pred ceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCCceeEEEeccCCC
Q 020027 67 RIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIVSEFINMA 144 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~ 144 (332)
+.||+|+|+.|-.+. ..+|..+|||++.+... .......+|+.++... .|+||+.+++|++++..+|||||-|.||
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g--HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GG 161 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG--HSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGG 161 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCc--hHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCc
Confidence 579999999999888 78999999999987643 3333568999999877 5999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC---ceEEccCCccccCCc---
Q 020027 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF---CARVCDYGLSFLAPE--- 218 (332)
Q Consensus 145 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~dfg~a~~~~~--- 218 (332)
+|...|.+... +++..+-++..+|+.||.|||.+ ||.||||||+|||..+.. -+|||||.++.....
T Consensus 162 plLshI~~~~~----F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~ 234 (463)
T KOG0607|consen 162 PLLSHIQKRKH----FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND 234 (463)
T ss_pred hHHHHHHHhhh----ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCC
Confidence 99999987544 88999999999999999999999 999999999999997654 479999987643211
Q ss_pred ----------ccCCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHH-HHHH------Hhhhcc
Q 020027 219 ----------EKRGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVK-WALP------LIKEMR 279 (332)
Q Consensus 219 ----------~~~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~-~~~~------~~~~~~ 279 (332)
+..|...|||||....- ....|+.++|.||+|+++|-|++|.+||.|.... ..+. ...+.-
T Consensus 235 ~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~L 314 (463)
T KOG0607|consen 235 CSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKL 314 (463)
T ss_pred CCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHH
Confidence 12577899999977532 2367899999999999999999999999875331 1111 011111
Q ss_pred cccccCCcCCCCCC--hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 280 FSELLDPRLAIPCE--IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 280 ~~~~~~~~~~~~~~--~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+..+.+..+..|.. -.-..+..+++...+..|+.+|-++.++++
T Consensus 315 FesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 315 FESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 22233344444432 123446779999999999999999998876
No 382
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-35 Score=273.97 Aligned_cols=255 Identities=22% Similarity=0.281 Sum_probs=208.6
Q ss_pred HHHHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeee--
Q 020027 54 TEIDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQ-- 129 (332)
Q Consensus 54 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~-- 129 (332)
+.+...++.|.+..++|.|.+|.||+++ .++++.+|+|+.......+ .+...|..+++.. +|||++.++|++.
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d---eEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE---EEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc---HHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 3334456788999999999999999999 6789999999987664333 2457788888877 6999999999884
Q ss_pred ---cCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceE
Q 020027 130 ---APGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCAR 206 (332)
Q Consensus 130 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 206 (332)
.++.+|||||||.+|+..++++... +..+.|..+..|+..++.|+.+||.+ .++|||+|-.|||++.++.||
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEE
Confidence 3478999999999999999998654 33488999999999999999999999 999999999999999999999
Q ss_pred EccCCccccCCcc------cCCcccccCcccccccC--CCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhc
Q 020027 207 VCDYGLSFLAPEE------KRGLAGYVDDDYWHEKG--GGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEM 278 (332)
Q Consensus 207 l~dfg~a~~~~~~------~~~~~~~~~pe~~~~~~--~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~ 278 (332)
+.|||++...... ..||+.|||||+....+ ...|+..+|+||+|++..||.-|.+|+.+..+.-++-.+...
T Consensus 164 LvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRN 243 (953)
T KOG0587|consen 164 LVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN 243 (953)
T ss_pred EeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCC
Confidence 9999999776543 36899999999886543 345778999999999999999999999887665554333332
Q ss_pred ccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 279 RFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
|.+..-.+.+=..++.+++..|+..|-++||++.++++
T Consensus 244 -------PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 244 -------PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred -------CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 22333334445568899999999999999999998874
No 383
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-35 Score=255.94 Aligned_cols=239 Identities=19% Similarity=0.258 Sum_probs=199.9
Q ss_pred HhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccc-cHHHHHHHhccC-CCCCccceeeeeecCCce
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGF-GFASVIKTLSLA-QHPNIVPILGFSQAPGER 134 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~-~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 134 (332)
....+|..+.+||+|+||+|..+. ..+.+.+|||+++++........ .-+.|-++|+.. +-|-+++++.++...+.+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence 345578889999999999999998 56788999999998765443332 346777788776 578899999999999999
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
|+||||+.||+|-..+++.+. +.+..+..++..||-||-+||++ ||+.||||..||+++.+|.+||+|||+++
T Consensus 426 yFVMEyvnGGDLMyhiQQ~Gk----FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcK 498 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVGK----FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 498 (683)
T ss_pred eeEEEEecCchhhhHHHHhcc----cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccc
Confidence 999999999999888887655 67788889999999999999999 99999999999999999999999999986
Q ss_pred cC------CcccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcC
Q 020027 215 LA------PEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 215 ~~------~~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (332)
.. ....+||+.|+|||...- .+|+.++|.|||||+||||+.|.+||.|...++....+.+..+
T Consensus 499 Eni~~~~TTkTFCGTPdYiAPEIi~Y---qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv-------- 567 (683)
T KOG0696|consen 499 ENIFDGVTTKTFCGTPDYIAPEIIAY---QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV-------- 567 (683)
T ss_pred ccccCCcceeeecCCCcccccceEEe---cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC--------
Confidence 42 233479999999998876 6899999999999999999999999999998888888776432
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCC
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRP 316 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RP 316 (332)
.++-.-+.+..++....+..+|.+|.
T Consensus 568 --syPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 568 --SYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred --cCcccccHHHHHHHHHHhhcCCcccc
Confidence 22222334666777788889999985
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=6.7e-34 Score=244.65 Aligned_cols=233 Identities=25% Similarity=0.275 Sum_probs=188.6
Q ss_pred CCeEEEEEEeC-CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCHHHHhc
Q 020027 73 RLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH 151 (332)
Q Consensus 73 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 151 (332)
+||.||+|... +|+.+++|.+........ ...+.+|++.+++++|+|++++++++......++++|++++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 58999999964 689999999876543221 3467899999999999999999999999899999999999999999987
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-----cCCcccc
Q 020027 152 ENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE-----KRGLAGY 226 (332)
Q Consensus 152 ~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~-----~~~~~~~ 226 (332)
.... +++..+..++.+++.++.|||+. +++|+|++|+||++++++.++++|||.+...... ..++..|
T Consensus 80 ~~~~----~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 152 (244)
T smart00220 80 KRGR----LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEY 152 (244)
T ss_pred hccC----CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCC
Confidence 5432 78899999999999999999998 9999999999999999999999999998766543 3567789
Q ss_pred cCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCc-hhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHH
Q 020027 227 VDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG-LLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVAL 305 (332)
Q Consensus 227 ~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 305 (332)
++||.... ...+.++|+||||+++|++++|..||.. ................. .........++.+++.
T Consensus 153 ~~pE~~~~---~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~ 222 (244)
T smart00220 153 MAPEVLLG---KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF-------PPPEWKISPEAKDLIR 222 (244)
T ss_pred CCHHHHcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC-------ccccccCCHHHHHHHH
Confidence 99998874 6678899999999999999999999976 33333333332221110 0000003347889999
Q ss_pred HcccCCCCCCCCHHHHHH
Q 020027 306 ACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 306 ~c~~~dp~~RPs~~~i~~ 323 (332)
+||..||++||++.++++
T Consensus 223 ~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 223 KLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHccCCchhccCHHHHhh
Confidence 999999999999999986
No 385
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=5.8e-34 Score=272.56 Aligned_cols=255 Identities=16% Similarity=0.125 Sum_probs=166.3
Q ss_pred hcCCCCCCceeeccCCeEEEEEEe-CC----CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeee------
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALL-ST----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGF------ 127 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~-~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~------ 127 (332)
..++|+..+.||+|+||.||+|+. .+ +..||+|++..... ......+ .+....+.++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 567899999999999999999995 45 78999998753211 0001111 1222223333332221
Q ss_pred eecCCceeEEEeccCCCCHHHHhcccCCCC----------------CcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecC
Q 020027 128 SQAPGERIIVSEFINMASLDFYLHENNDGA----------------SLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGC 191 (332)
Q Consensus 128 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----------------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~d 191 (332)
+...+..++++||+++++|.+++....... .......+..++.|++.||.|||++ +|+|||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRD 280 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRD 280 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCc
Confidence 245567899999999999999986532100 0012334567899999999999998 999999
Q ss_pred CCCCCEEeCC-CCceEEccCCccccCC-------cccCCcccccCcccccccCC-------------------CCCCchh
Q 020027 192 IKASNILLNE-KFCARVCDYGLSFLAP-------EEKRGLAGYVDDDYWHEKGG-------------------GNATRES 244 (332)
Q Consensus 192 lk~~Nill~~-~~~~kl~dfg~a~~~~-------~~~~~~~~~~~pe~~~~~~~-------------------~~~~~~~ 244 (332)
|||+|||++. ++.+||+|||+|+... ....+++.|+|||.+..... ..++.++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999985 6799999999997542 22357889999996542210 1245577
Q ss_pred hhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcc-----cccccCCcCCCC----CC--hHHHHHHHHHHHHcccCCCC
Q 020027 245 DVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMR-----FSELLDPRLAIP----CE--IKPLVRLAKVALACVGNSRK 313 (332)
Q Consensus 245 DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----~~--~~~~~~l~~l~~~c~~~dp~ 313 (332)
|||||||++|||+++..++........ ..+.... +.....+..... .. ........+++.+|++.||+
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNLIQFN-RQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHHHHHH-HHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 999999999999997766544321111 1111110 111111110000 00 00111345899999999999
Q ss_pred CCCCHHHHHH
Q 020027 314 NRPSIVQVAT 323 (332)
Q Consensus 314 ~RPs~~~i~~ 323 (332)
+|||+.|+++
T Consensus 440 kR~ta~e~L~ 449 (566)
T PLN03225 440 QRISAKAALA 449 (566)
T ss_pred cCCCHHHHhC
Confidence 9999999986
No 386
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-36 Score=247.08 Aligned_cols=255 Identities=20% Similarity=0.246 Sum_probs=191.9
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeec--------
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQA-------- 130 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 130 (332)
.+.|.....+|+|.||.||+++ .++|+.||+|++--+.....-.....+|++++..++|+|++.+.+.|..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 3456777889999999999999 5678889999875433222222346899999999999999999988743
Q ss_pred CCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccC
Q 020027 131 PGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDY 210 (332)
Q Consensus 131 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~df 210 (332)
...+++|+.+|+. +|.-.+..... .++..++.+++.++..||.|+|.. .|+|||+|++|+|++.++.+||+||
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~v---r~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKV---RFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccc---cccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecc
Confidence 2347999999974 77777754322 278899999999999999999998 9999999999999999999999999
Q ss_pred CccccCCccc----------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh---
Q 020027 211 GLSFLAPEEK----------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE--- 277 (332)
Q Consensus 211 g~a~~~~~~~----------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~--- 277 (332)
|+++...... .-|.-|.+||.+.+. ..++++.|||+.||++.||+||.+.+++.........+..
T Consensus 169 Glar~fs~~~n~~kprytnrvvTLwYrppEllLG~--r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcG 246 (376)
T KOG0669|consen 169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGD--REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCG 246 (376)
T ss_pred ccccceecccccCCCCcccceeeeecCCHHHhhcc--cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhc
Confidence 9996543221 237789999998875 7899999999999999999999998887655444333321
Q ss_pred ------------cccccccCCc-CC-CC--------CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 278 ------------MRFSELLDPR-LA-IP--------CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 278 ------------~~~~~~~~~~-~~-~~--------~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.++.+-+... +. .. .+..-..+..+++.+++..||++|+++++++.
T Consensus 247 s~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 247 SITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred cCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 1111111000 00 00 00001125779999999999999999999875
No 387
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=231.55 Aligned_cols=218 Identities=23% Similarity=0.316 Sum_probs=175.9
Q ss_pred HHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHh-ccCCCCCccceeeeeecCCc
Q 020027 56 IDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTL-SLAQHPNIVPILGFSQAPGE 133 (332)
Q Consensus 56 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~ 133 (332)
++...+.......||+|++|.|-+-+ .++|...|+|.++.... .....+.++|+.+. +....|.+|.++|.....+.
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 55566667777889999999998887 57999999999986554 22333566777755 44579999999999999999
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
.+|.||.|. .+|+.+-.+.......+++.-.=+|+..+.+||.|||++. .++|||+||+|||++.+|.+|+||||++
T Consensus 120 vwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccc
Confidence 999999995 6888776654444455888888899999999999999974 8999999999999999999999999999
Q ss_pred ccCCccc-----CCcccccCcccccccC-CCCCCchhhhHHHHHHHHHHHhCCCCCCch-hHHHHHHHhhh
Q 020027 214 FLAPEEK-----RGLAGYVDDDYWHEKG-GGNATRESDVYGFGVVLLEILSGRRCEEGL-LVKWALPLIKE 277 (332)
Q Consensus 214 ~~~~~~~-----~~~~~~~~pe~~~~~~-~~~~~~~~DiwS~G~il~el~tg~~p~~~~-~~~~~~~~~~~ 277 (332)
-.+.++. .|...|+|||...... ...|+-+|||||+|+.+.||.+++.||... .+-..++.+.+
T Consensus 197 G~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 197 GYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred eeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 7766553 5778999999886543 347899999999999999999999998643 33344444444
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.1e-33 Score=261.69 Aligned_cols=263 Identities=17% Similarity=0.127 Sum_probs=179.4
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEe-----------------CCCCEEEEEEeccCcccc------------cccccHHH
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALL-----------------STGKLVAVKRIHPRLVLS------------NAGFGFAS 108 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~------------~~~~~~~~ 108 (332)
...++|+..+.||+|+||.||+|.. ..++.||||.+....... ........
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 3578999999999999999999963 245689999986432111 01122445
Q ss_pred HHHHhccCCCCCc-----cceeeeeec--------CCceeEEEeccCCCCHHHHhcccCCC-------------------
Q 020027 109 VIKTLSLAQHPNI-----VPILGFSQA--------PGERIIVSEFINMASLDFYLHENNDG------------------- 156 (332)
Q Consensus 109 e~~~l~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~~~------------------- 156 (332)
|+.++.+++|.|+ ++++++|.. .+..++|+||+++++|.++++.....
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 6777777766544 677777643 35679999999999999998642110
Q ss_pred -CCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc-------CCcccccC
Q 020027 157 -ASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK-------RGLAGYVD 228 (332)
Q Consensus 157 -~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~-------~~~~~~~~ 228 (332)
...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....... ..++.|++
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 01246778889999999999999998 99999999999999999999999999986543211 23678999
Q ss_pred cccccccCCC-------------------CCCchhhhHHHHHHHHHHHhCCC-CCCchhHHHH-HHHhh--hcccccccC
Q 020027 229 DDYWHEKGGG-------------------NATRESDVYGFGVVLLEILSGRR-CEEGLLVKWA-LPLIK--EMRFSELLD 285 (332)
Q Consensus 229 pe~~~~~~~~-------------------~~~~~~DiwS~G~il~el~tg~~-p~~~~~~~~~-~~~~~--~~~~~~~~~ 285 (332)
||.+...... ....+.|+||+||+++||+++.. |+.+...... ..... ...+.....
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~ 458 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG 458 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence 9987542111 11235799999999999999875 6654211111 00000 000111111
Q ss_pred CcCCCCCChHHHHHHHHHHHHcccCCC---CCCCCHHHHHH
Q 020027 286 PRLAIPCEIKPLVRLAKVALACVGNSR---KNRPSIVQVAT 323 (332)
Q Consensus 286 ~~~~~~~~~~~~~~l~~l~~~c~~~dp---~~RPs~~~i~~ 323 (332)
.....+..........+++.+++..+| .+|+|++|+++
T Consensus 459 ~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 459 QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 122222222234467899999998765 68999999875
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-35 Score=260.87 Aligned_cols=240 Identities=16% Similarity=0.169 Sum_probs=200.7
Q ss_pred cCCCCCCceeeccCCeEEEEEEeCCC-CEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLSTG-KLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
..+++....||-|+||.|=.++.... ..+|+|.+++...-+. +......|-.+|...+.|.||++|-.+.++...|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 44667778899999999998885433 3589999987665433 333467888899999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
||-|-||.+...++..+. ++..+...++..+.+|+.|||++ +|+.|||||+|.+++.+|.+|+.|||+|+...
T Consensus 499 mEaClGGElWTiLrdRg~----Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGS----FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred HHhhcCchhhhhhhhcCC----cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 999999999999987554 88888889999999999999999 99999999999999999999999999998876
Q ss_pred ccc-----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCC
Q 020027 218 EEK-----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPC 292 (332)
Q Consensus 218 ~~~-----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (332)
... +||+.|.|||.... ...+.++|.||+|+++|||+||++||.+..+...+..+..+.- . ...
T Consensus 572 ~g~KTwTFcGTpEYVAPEIILn---KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid------~--i~~ 640 (732)
T KOG0614|consen 572 SGRKTWTFCGTPEYVAPEIILN---KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID------K--IEF 640 (732)
T ss_pred cCCceeeecCCcccccchhhhc---cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh------h--hhc
Confidence 554 79999999999988 6778999999999999999999999999888877777766421 0 111
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCC
Q 020027 293 EIKPLVRLAKVALACVGNSRKNRPS 317 (332)
Q Consensus 293 ~~~~~~~l~~l~~~c~~~dp~~RPs 317 (332)
+..-.....+++.+.+..+|.+|--
T Consensus 641 Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 641 PRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ccccchhHHHHHHHHHhcCcHhhhc
Confidence 2222336778999999999999964
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=269.42 Aligned_cols=240 Identities=24% Similarity=0.295 Sum_probs=181.5
Q ss_pred CCCCCceeeccCCeEE-EEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTV-YAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V-~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 139 (332)
-|...+.+|.|+-|+| |+|.. .|+.||||.+-.... .-..+|++.++.- +|||||++++.-.++.+.||..|
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~~-----~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEFF-----DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee-CCceehHHHHhhHhH-----HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 4566678999999865 99998 578999998864321 1246899988876 69999999999999999999999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC---C--CceEEccCCccc
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE---K--FCARVCDYGLSF 214 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~--~~~kl~dfg~a~ 214 (332)
.| ..+|.+++...........-.....+..|+++|+++||+. +||||||||.||||+. + ..++|+|||+++
T Consensus 584 LC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 584 LC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred Hh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 99 4799999987411110011123456789999999999997 9999999999999975 2 468999999987
Q ss_pred cCCcc---------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhccccccc
Q 020027 215 LAPEE---------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELL 284 (332)
Q Consensus 215 ~~~~~---------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 284 (332)
..... ..||.+|+|||.+.. ..-+.++||+|+||++|..+| |+.||.+....++ .+..+...-.
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~---~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~L~- 733 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLRE---DRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILTGNYTLV- 733 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhc---cccCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhcCcccee-
Confidence 65432 258999999999987 455679999999999999999 5889987644322 2222211100
Q ss_pred CCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 285 DPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+ .....+ +..+||.+++.+||..||++.+|+.
T Consensus 734 --~L--~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 734 --HL--EPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred --ee--ccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 01 111122 6779999999999999999999874
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-33 Score=255.39 Aligned_cols=202 Identities=20% Similarity=0.198 Sum_probs=172.5
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
+.-|..++.||-|+||+|..++ ..+...+|.|.+++.....+ +......|-.+|+..+++.||+++-.|.+.+.+|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 4457778999999999999998 56778999999987665433 333466788899999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc--
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL-- 215 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~-- 215 (332)
|+|++||++-.++-+.+ .+++..+..++..+.+|+++.|.. |++||||||.|||||.+|.+||.|||++.-
T Consensus 708 MdYIPGGDmMSLLIrmg----IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMG----IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred EeccCCccHHHHHHHhc----cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccce
Confidence 99999999988887644 378888888999999999999998 999999999999999999999999998610
Q ss_pred -------C---------------------------------------CcccCCcccccCcccccccCCCCCCchhhhHHH
Q 020027 216 -------A---------------------------------------PEEKRGLAGYVDDDYWHEKGGGNATRESDVYGF 249 (332)
Q Consensus 216 -------~---------------------------------------~~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~ 249 (332)
. .....||..|+|||++.. ..++..||.||.
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r---~g~~q~cdwws~ 857 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR---TGYTQLCDWWSV 857 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc---cCccccchhhHh
Confidence 0 001158999999999987 678999999999
Q ss_pred HHHHHHHHhCCCCCCchhHHHH
Q 020027 250 GVVLLEILSGRRCEEGLLVKWA 271 (332)
Q Consensus 250 G~il~el~tg~~p~~~~~~~~~ 271 (332)
|||||||+.|+.||....+.+.
T Consensus 858 gvil~em~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 858 GVILYEMLVGQPPFLADTPGET 879 (1034)
T ss_pred hHHHHHHhhCCCCccCCCCCcc
Confidence 9999999999999987655544
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-34 Score=236.48 Aligned_cols=252 Identities=21% Similarity=0.264 Sum_probs=190.5
Q ss_pred CCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCC-----ceeE
Q 020027 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPG-----ERII 136 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~l 136 (332)
.+..+.||-|+||.||.+. -.+|+.||+|++..-...-.....+.+|++++.-++|.|++..++....++ ..|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 4556789999999999998 458999999998654433344456789999999999999999999876553 4578
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
++|.+. .+|...+-+.. .++..++.-+.+||+.||.|||+. +|.||||||.|.|++.|...||||||+++.-
T Consensus 135 ~TELmQ-SDLHKIIVSPQ----~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIVSPQ----ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHH-hhhhheeccCC----CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccccc
Confidence 889885 68877776543 378888888999999999999998 9999999999999999999999999999875
Q ss_pred Cccc-------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh------------
Q 020027 217 PEEK-------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE------------ 277 (332)
Q Consensus 217 ~~~~-------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~------------ 277 (332)
.... .-|..|.+||.+.+. ..|+.+.||||.|||+.||+.++..|....+-..+..+.+
T Consensus 207 e~d~~~hMTqEVVTQYYRAPEiLMGa--RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ 284 (449)
T KOG0664|consen 207 DQRDRLNMTHEVVTQYYRAPELLMGA--RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY 284 (449)
T ss_pred chhhhhhhHHHHHHHHhccHHHhhcc--hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH
Confidence 4322 346789999998775 7899999999999999999988877765444333333222
Q ss_pred ---cccccccCCcCCCC---------CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 278 ---MRFSELLDPRLAIP---------CEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 278 ---~~~~~~~~~~~~~~---------~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
+...-+++...+.| .+.....+...+..+.+.+||+.|.+..+.+..
T Consensus 285 ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 285 ACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred HhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 11111222222211 111122245577788899999999998876653
No 393
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.2e-32 Score=234.43 Aligned_cols=237 Identities=20% Similarity=0.327 Sum_probs=193.1
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccccccc-HHHHHHHhccC-CCCCccceeeeeecCCceeE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFG-FASVIKTLSLA-QHPNIVPILGFSQAPGERII 136 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~-~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 136 (332)
.++|..+++||+|+|.+|..++ .++.+.+|+|++++....+.+..+ ...|..+.... +||-+|-++.++..+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 4678999999999999999999 568899999999987665554443 44666666655 79999999999999999999
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
|.||++||+|--.+.+... +++.++..+...|+.||.|||++ ||+.||||..|+|+|..|.+|+.|+|+++..
T Consensus 329 vieyv~ggdlmfhmqrqrk----lpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEecCcceeeehhhhhc----CcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence 9999999999777765443 89999999999999999999999 9999999999999999999999999998642
Q ss_pred ------CcccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCc--h------hHHHHHHHhhhccccc
Q 020027 217 ------PEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG--L------LVKWALPLIKEMRFSE 282 (332)
Q Consensus 217 ------~~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~--~------~~~~~~~~~~~~~~~~ 282 (332)
....+||+.|+|||.+.+ ..|...+|.|++|++++||+.|+.||.- . ..+..+..
T Consensus 402 l~~gd~tstfcgtpnyiapeilrg---eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv-------- 470 (593)
T KOG0695|consen 402 LGPGDTTSTFCGTPNYIAPEILRG---EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV-------- 470 (593)
T ss_pred CCCCcccccccCCCcccchhhhcc---cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH--------
Confidence 233479999999999987 7889999999999999999999999962 1 11222222
Q ss_pred ccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCC
Q 020027 283 LLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRP 316 (332)
Q Consensus 283 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RP 316 (332)
++...++.|.+.. .+...++..-+..||++|.
T Consensus 471 ilekqiriprsls--vkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 471 ILEKQIRIPRSLS--VKASHVLKGFLNKDPKERL 502 (593)
T ss_pred Hhhhcccccceee--hhhHHHHHHhhcCCcHHhc
Confidence 2333444444433 3666788899999999985
No 394
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=252.24 Aligned_cols=251 Identities=23% Similarity=0.277 Sum_probs=204.3
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 137 (332)
..++|+....+|.|+||.||+++ ..+++..|+|.++......-. ...+|+-+++..+||||+.++|.+...+..++.
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~--~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFS--GIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcccc--ccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 45689999999999999999999 678999999999865443322 357889999999999999999999999999999
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
||||.+|+|++.-+.- ..+++.++-.+....++|+.|||+. +-+|||+|-.||++++.|.+|++|||.+....
T Consensus 91 MEycgggslQdiy~~T----gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqit 163 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVT----GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQIT 163 (829)
T ss_pred EEecCCCcccceeeec----ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhh
Confidence 9999999998866532 3388888889999999999999999 99999999999999999999999999986554
Q ss_pred cc------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCC
Q 020027 218 EE------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIP 291 (332)
Q Consensus 218 ~~------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
.. ..||+.|||||...-...+.|..+||||+.|+...|+.--.+|-.+..+......+....+.. +.+.-.
T Consensus 164 ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qp---p~lkDk 240 (829)
T KOG0576|consen 164 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQP---PTLKDK 240 (829)
T ss_pred hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCC---CcccCC
Confidence 32 369999999998876555788999999999999999988777766666655555554432221 222222
Q ss_pred CChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 292 CEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 292 ~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
... ...+.++++.|+..+|++|||++.+++
T Consensus 241 ~kw--s~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 241 TKW--SEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ccc--hHHHHHHHHHHhcCCCccCCChhhhee
Confidence 112 225678999999999999999988765
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=9e-32 Score=218.02 Aligned_cols=246 Identities=16% Similarity=0.221 Sum_probs=185.6
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeeeeecC--Cce
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGFSQAP--GER 134 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~ 134 (332)
..++|++.+.+|+|.|+.||.|. ..+.+.++||.+++-. ...+.+|++++..++ ||||+++++...++ ...
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence 35689999999999999999999 6788899999997542 235689999999997 99999999998765 467
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC-CCceEEccCCcc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE-KFCARVCDYGLS 213 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~dfg~a 213 (332)
.+++||..+.+...+-.. ++...+..++.+++.||.|+|+. ||+|||+||.|+++|. ....+++|+|+|
T Consensus 111 aLiFE~v~n~Dfk~ly~t-------l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLYPT-------LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred hhHhhhhccccHHHHhhh-------hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchH
Confidence 899999988877665432 55667788999999999999999 9999999999999985 568999999999
Q ss_pred ccCCccc-----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCC-chhHHHHH-------------HH
Q 020027 214 FLAPEEK-----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEE-GLLVKWAL-------------PL 274 (332)
Q Consensus 214 ~~~~~~~-----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~-~~~~~~~~-------------~~ 274 (332)
-+..... ..+..|-.||.+-.- ..++..-|+|||||++.+|+..+.||. |....+.+ .+
T Consensus 181 EFYHp~~eYnVRVASRyfKGPELLVdy--~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Y 258 (338)
T KOG0668|consen 181 EFYHPGKEYNVRVASRYFKGPELLVDY--QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAY 258 (338)
T ss_pred hhcCCCceeeeeeehhhcCCchheeec--hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHH
Confidence 7654432 344566789987653 567788999999999999999888864 33221111 11
Q ss_pred hhhcccccccCCcCCC--------C-------CCh-HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 275 IKEMRFSELLDPRLAI--------P-------CEI-KPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 275 ~~~~~~~~~~~~~~~~--------~-------~~~-~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
+.. +.-.++|.+.. + .+. -...++.+++.+.+.+|-.+|||+.|...
T Consensus 259 l~K--Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 259 LNK--YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHH--HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 111 11112222211 0 000 01247889999999999999999998753
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=6.2e-32 Score=244.05 Aligned_cols=196 Identities=19% Similarity=0.260 Sum_probs=169.1
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCccccc------ccccHHHHHHHhccCC---CCCccceeeeee
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSN------AGFGFASVIKTLSLAQ---HPNIVPILGFSQ 129 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~---h~niv~~~~~~~ 129 (332)
..+|...+.+|+|+||.|+.+.. ++...|++|.+.+...... .-.....||++|+.++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 45689999999999999999994 4667899999987553221 1123688999999997 999999999999
Q ss_pred cCCceeEEEecc-CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEc
Q 020027 130 APGERIIVSEFI-NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVC 208 (332)
Q Consensus 130 ~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 208 (332)
+++.++|.||-- ++.+|.+++....+ +++..+..|+.|++.|+++||++ +|||||||-+|+.++.+|.+|++
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~----m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPR----MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCc----cchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEe
Confidence 999999999974 45689999976654 88999999999999999999999 99999999999999999999999
Q ss_pred cCCccccCCccc----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 020027 209 DYGLSFLAPEEK----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEE 264 (332)
Q Consensus 209 dfg~a~~~~~~~----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~ 264 (332)
|||.|....+.. .||.+|.|||.+.+. ......-|||++|++||.++....||.
T Consensus 713 dfgsaa~~ksgpfd~f~gtv~~aapevl~g~--~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 713 DFGSAAYTKSGPFDVFVGTVDYAAPEVLGGE--KYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eccchhhhcCCCcceeeeeccccchhhhCCC--ccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999997766543 799999999998774 455678999999999999999888875
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=4.8e-30 Score=215.41 Aligned_cols=206 Identities=33% Similarity=0.445 Sum_probs=177.2
Q ss_pred eeccCCeEEEEEEeC-CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCHH
Q 020027 69 IGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLD 147 (332)
Q Consensus 69 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 147 (332)
||+|++|.||++... +++.+++|......... ....+.+|+..++.++|++++++++++...+..++++|++++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 689999999999964 58999999987554321 1235789999999999999999999999989999999999999999
Q ss_pred HHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC-CCceEEccCCccccCCcc------c
Q 020027 148 FYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE-KFCARVCDYGLSFLAPEE------K 220 (332)
Q Consensus 148 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~dfg~a~~~~~~------~ 220 (332)
+++.... ..+++..+..++.+++.++.+||+. +++|+||+|.||+++. ++.++++|||.+...... .
T Consensus 80 ~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (215)
T cd00180 80 DLLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI 153 (215)
T ss_pred HHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcc
Confidence 9987642 1278899999999999999999998 9999999999999999 899999999998755433 3
Q ss_pred CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHH
Q 020027 221 RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRL 300 (332)
Q Consensus 221 ~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (332)
.+...|.+||..... ...+.++|+||+|++++++ ..+
T Consensus 154 ~~~~~~~~pe~~~~~--~~~~~~~D~~~lg~~~~~l-----------------------------------------~~~ 190 (215)
T cd00180 154 VGTPAYMAPEVLLGK--GYYSEKSDIWSLGVILYEL-----------------------------------------PEL 190 (215)
T ss_pred cCCCCccChhHhccc--CCCCchhhhHHHHHHHHHH-----------------------------------------HHH
Confidence 467789999988652 3678899999999999998 367
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHH
Q 020027 301 AKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 301 ~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
.+++..|++.||++||++.++++.
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhC
Confidence 789999999999999999999864
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-31 Score=223.35 Aligned_cols=250 Identities=21% Similarity=0.207 Sum_probs=188.7
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecC------C
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAP------G 132 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 132 (332)
..+|...+.+|.|.- .|..+. .-.+++||+|++..............+|...+..++|+|+++++.++... .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 456888888999988 555555 33688999999876654444445678999999999999999999998644 3
Q ss_pred ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCc
Q 020027 133 ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~ 212 (332)
..+++||+|. .+|.+.+.-. ++..++..++.|+++|++|||+. +|+||||||+||++..+..+||.|||+
T Consensus 95 e~y~v~e~m~-~nl~~vi~~e------lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVILME------LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred hHHHHHHhhh-hHHHHHHHHh------cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence 5689999995 6888877621 67888999999999999999999 999999999999999999999999999
Q ss_pred cccCCccc-----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh--c----cc-
Q 020027 213 SFLAPEEK-----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE--M----RF- 280 (332)
Q Consensus 213 a~~~~~~~-----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~--~----~~- 280 (332)
|+...... ..|..|.|||...+ ..+.+.+||||.||++.||++|+.-|.|...-+.+..+.+ + ++
T Consensus 165 ar~e~~~~~mtpyVvtRyyrapevil~---~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~ 241 (369)
T KOG0665|consen 165 ARTEDTDFMMTPYVVTRYYRAPEVILG---MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFM 241 (369)
T ss_pred hcccCcccccCchhheeeccCchheec---cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHH
Confidence 98765442 45678999999887 4589999999999999999999987766433222211111 0 00
Q ss_pred ----------------------ccc-cCCcCCC--CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 281 ----------------------SEL-LDPRLAI--PCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 281 ----------------------~~~-~~~~~~~--~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
.+. -|..... ..+......+.+++.++|..||++|.|++++++
T Consensus 242 ~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 242 KQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 000 0000000 011112234668999999999999999999885
No 399
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=8.5e-29 Score=210.75 Aligned_cols=194 Identities=29% Similarity=0.423 Sum_probs=166.2
Q ss_pred CCCCceeeccCCeEEEEEEeC-CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEecc
Q 020027 63 FSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 141 (332)
|...+.||+|++|.||++... +++.+++|.+...... .....+.+|+..++.++|+|++++++++...+..++++|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 456788999999999999964 5889999999765432 12335788999999999999999999999989999999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc--
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE-- 219 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~-- 219 (332)
++++|.+++...... +++.....++.+++.++.+||+. +++|+|++|.||+++.++.++++|||.+......
T Consensus 80 ~~~~L~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 80 EGGDLFDYLRKKGGK---LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred CCCCHHHHHHhcccC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 999999999764321 67889999999999999999998 9999999999999999999999999998765433
Q ss_pred -----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCc
Q 020027 220 -----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEG 265 (332)
Q Consensus 220 -----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~ 265 (332)
..++..|++||... ....++.++|+||||++++|+++|+.||..
T Consensus 154 ~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLL--GGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhc--CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 24667899999874 336777899999999999999999999976
No 400
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=1.4e-30 Score=232.81 Aligned_cols=258 Identities=20% Similarity=0.202 Sum_probs=200.4
Q ss_pred HHHHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC------CCCccceeee
Q 020027 55 EIDAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ------HPNIVPILGF 127 (332)
Q Consensus 55 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~ 127 (332)
-.+..-+.|......|+|-|++|.+|+ ...|+.||||++++....... -+.|+.+|++|+ --|+++++-.
T Consensus 426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~Kt---Gl~EleiLkKL~~AD~Edk~Hclrl~r~ 502 (752)
T KOG0670|consen 426 IGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKT---GLKELEILKKLNDADPEDKFHCLRLFRH 502 (752)
T ss_pred hhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhh---hhHHHHHHHHhhccCchhhhHHHHHHHH
Confidence 344455678888889999999999999 556889999999876543332 378999999885 3489999999
Q ss_pred eecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC-CCceE
Q 020027 128 SQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE-KFCAR 206 (332)
Q Consensus 128 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~k 206 (332)
|...+++|+|+|.+. -+|.+.++..+.+ ..+....+..++.|+.-||..|-.. +|+|.||||.|||+++ ...+|
T Consensus 503 F~hknHLClVFE~Ls-lNLRevLKKyG~n-vGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLK 577 (752)
T KOG0670|consen 503 FKHKNHLCLVFEPLS-LNLREVLKKYGRN-VGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILK 577 (752)
T ss_pred hhhcceeEEEehhhh-chHHHHHHHhCcc-cceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceee
Confidence 999999999999985 5899999876543 2377888999999999999999987 9999999999999986 56789
Q ss_pred EccCCccccCCcccC----CcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh--ccc
Q 020027 207 VCDYGLSFLAPEEKR----GLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE--MRF 280 (332)
Q Consensus 207 l~dfg~a~~~~~~~~----~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~--~~~ 280 (332)
|||||.|....+... -...|.|||.+.+ .+|+...|+||.||.||||.||+..|.|.....++.+..+ +.+
T Consensus 578 LCDfGSA~~~~eneitPYLVSRFYRaPEIiLG---~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~ 654 (752)
T KOG0670|consen 578 LCDFGSASFASENEITPYLVSRFYRAPEIILG---LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKF 654 (752)
T ss_pred eccCccccccccccccHHHHHHhccCcceeec---CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCC
Confidence 999999988776542 2347999999887 7899999999999999999999998888766555443322 111
Q ss_pred c-----------cccCCcCC------------------------------------CC-CChHHHHHHHHHHHHcccCCC
Q 020027 281 S-----------ELLDPRLA------------------------------------IP-CEIKPLVRLAKVALACVGNSR 312 (332)
Q Consensus 281 ~-----------~~~~~~~~------------------------------------~~-~~~~~~~~l~~l~~~c~~~dp 312 (332)
. +..|..+. .+ ........+.+|+..|+..||
T Consensus 655 p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP 734 (752)
T KOG0670|consen 655 PNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDP 734 (752)
T ss_pred cHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccCh
Confidence 0 01111000 00 112334568899999999999
Q ss_pred CCCCCHHHHHH
Q 020027 313 KNRPSIVQVAT 323 (332)
Q Consensus 313 ~~RPs~~~i~~ 323 (332)
++|.|..+.+.
T Consensus 735 ~KRit~nqAL~ 745 (752)
T KOG0670|consen 735 EKRITVNQALK 745 (752)
T ss_pred hhcCCHHHHhc
Confidence 99999998764
No 401
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-29 Score=223.26 Aligned_cols=131 Identities=24% Similarity=0.319 Sum_probs=107.9
Q ss_pred CCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC-----C---CCccceeeeeecC
Q 020027 61 DGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-----H---PNIVPILGFSQAP 131 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~~~~ 131 (332)
.+|...+.||.|.|++||.+. .++.+.||+|+++......+ ..+.||++|++++ | .+||++++.|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtE---aAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTE---AALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHH---HHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 567778999999999999999 67888999999875432222 3478899888773 2 4799999998543
Q ss_pred ----CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEe
Q 020027 132 ----GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILL 199 (332)
Q Consensus 132 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill 199 (332)
.++++|+|++ |.+|..+|......+ ++...+.+|+.||+.||.|||..| ||+|-||||+|||+
T Consensus 155 GpNG~HVCMVfEvL-GdnLLklI~~s~YrG--lpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVL-GDNLLKLIKYSNYRG--LPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCCcEEEEEehhh-hhHHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 5789999999 667877877654333 889999999999999999999998 99999999999997
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6e-30 Score=212.19 Aligned_cols=254 Identities=16% Similarity=0.238 Sum_probs=183.3
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeee-eecCCcee
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGF-SQAPGERI 135 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~-~~~~~~~~ 135 (332)
..+.|.+.+.||+|.||.+..++ .++.+.+++|.+..... ...+|.+|..---.| .|.||+.-++. ++..+.+.
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 45678999999999999999999 56778999998865432 233567776533334 58999988764 67778889
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeC--CCCceEEccCCcc
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLN--EKFCARVCDYGLS 213 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~--~~~~~kl~dfg~a 213 (332)
+++||++.|+|..-+...+ +.+.-...++.|+++|+.|+|+. ++||||||.+|||+- +...+|+||||.+
T Consensus 99 F~qE~aP~gdL~snv~~~G-----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAAG-----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred EeeccCccchhhhhcCccc-----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccc
Confidence 9999999999998876533 67778889999999999999999 999999999999994 3558999999999
Q ss_pred ccCCccc---CCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcC
Q 020027 214 FLAPEEK---RGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRL 288 (332)
Q Consensus 214 ~~~~~~~---~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (332)
+..+... .-+-.|.+||..... +.....+.+|+|.||+++|.++||..||+.....+. .++.-..+.....+..
T Consensus 171 ~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~-~Y~~~~~w~~rk~~~~ 249 (378)
T KOG1345|consen 171 RKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK-PYWEWEQWLKRKNPAL 249 (378)
T ss_pred cccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCc-hHHHHHHHhcccCccC
Confidence 8765432 235678888876543 223457889999999999999999999974322111 1222222222222222
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 020027 289 AIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATIL 325 (332)
Q Consensus 289 ~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L 325 (332)
+-... .-..++.++..+-++++|++|--..+.....
T Consensus 250 P~~F~-~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 250 PKKFN-PFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred chhhc-ccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 11111 1122677788899999999995555554443
No 403
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=210.50 Aligned_cols=250 Identities=21% Similarity=0.359 Sum_probs=197.1
Q ss_pred CceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCC
Q 020027 66 RRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMAS 145 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 145 (332)
...|.+...|..|+|+++ |..+++|++..+....+.+.+|..|.-.++.+.||||..++|.|..+....++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 345788889999999995 5677779998888777788889999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEc--cCCccccCCcccCCc
Q 020027 146 LDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVC--DYGLSFLAPEEKRGL 223 (332)
Q Consensus 146 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~--dfg~a~~~~~~~~~~ 223 (332)
|+..+++... ...+..++.+++.+++.|++|||+. .+-|...-|+...+++|++.+.+|+ |--++.+. ....-.
T Consensus 274 lynvlhe~t~--vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe-~gr~y~ 349 (448)
T KOG0195|consen 274 LYNVLHEQTS--VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE-VGRAYS 349 (448)
T ss_pred HHHHHhcCcc--EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeec-cccccC
Confidence 9999986532 3467889999999999999999986 3345556789999999999998875 43233221 122346
Q ss_pred ccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHH-HHHhhhcccccccCCcCCCCCChHHHHHHHH
Q 020027 224 AGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWA-LPLIKEMRFSELLDPRLAIPCEIKPLVRLAK 302 (332)
Q Consensus 224 ~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 302 (332)
+.|++||.++.......-.++|+|||++++|||.|...||.+..+.+. ++...++ ++...++.-...+.+
T Consensus 350 pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeg---------lrv~ippgis~hm~k 420 (448)
T KOG0195|consen 350 PAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG---------LRVHIPPGISRHMNK 420 (448)
T ss_pred cccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc---------ccccCCCCccHHHHH
Confidence 789999999875444445689999999999999999999987655433 2222221 222222233346789
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 303 VALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 303 l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
+|.-|...||.+||.|..|+-.|+++.
T Consensus 421 lm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 421 LMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 999999999999999999999999874
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=5.8e-29 Score=248.85 Aligned_cols=188 Identities=16% Similarity=0.184 Sum_probs=136.5
Q ss_pred cCCC-CCccceeeee-------ecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 020027 115 LAQH-PNIVPILGFS-------QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186 (332)
Q Consensus 115 ~l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ 186 (332)
.++| +||.++++++ .....++.++|++ +++|.+++.... ..+++.+++.++.||++||.|||++ +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD---RSVDAFECFHVFRQIVEIVNAAHSQ---G 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc---ccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 4456 5888888877 2224566778887 569999997532 2388999999999999999999998 9
Q ss_pred eeecCCCCCCEEeCC-------------------CCceEEccCCccccCCc----------------------ccCCccc
Q 020027 187 IIHGCIKASNILLNE-------------------KFCARVCDYGLSFLAPE----------------------EKRGLAG 225 (332)
Q Consensus 187 ivH~dlk~~Nill~~-------------------~~~~kl~dfg~a~~~~~----------------------~~~~~~~ 225 (332)
|+||||||+|||++. ++.+|++|||+++.... ...+|+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999953 45677788887753211 0135777
Q ss_pred ccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHH
Q 020027 226 YVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVAL 305 (332)
Q Consensus 226 ~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 305 (332)
|+|||.+.. ..++.++|||||||+||||++|..|+..... ....+... ...+.. .....+..+++.
T Consensus 181 Y~APE~~~~---~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~----~~~~~~-----~~~~~~~~~~~~ 246 (793)
T PLN00181 181 YTSPEEDNG---SSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHR----VLPPQI-----LLNWPKEASFCL 246 (793)
T ss_pred eEChhhhcc---CCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHh----hcChhh-----hhcCHHHHHHHH
Confidence 999999876 6789999999999999999998887653211 11111111 111111 111224567888
Q ss_pred HcccCCCCCCCCHHHHHH
Q 020027 306 ACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 306 ~c~~~dp~~RPs~~~i~~ 323 (332)
+||+.||.+|||+.|+++
T Consensus 247 ~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 247 WLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HhCCCChhhCcChHHHhh
Confidence 999999999999999975
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=3.5e-28 Score=199.85 Aligned_cols=166 Identities=18% Similarity=0.140 Sum_probs=124.0
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc-ccCC
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE-EKRG 222 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~-~~~~ 222 (332)
|+|.+++..... .+++..++.++.|++.||.|||++ + ||+||+++.++.+|+ ||++..... ...+
T Consensus 1 GsL~~~l~~~~~---~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g 66 (176)
T smart00750 1 VSLADILEVRGR---PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQSRV 66 (176)
T ss_pred CcHHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccccCCC
Confidence 688888875432 389999999999999999999998 5 999999999999999 999876543 3368
Q ss_pred cccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH-HHHHHHhhhcccccccCCcCCCCCChHHH--HH
Q 020027 223 LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV-KWALPLIKEMRFSELLDPRLAIPCEIKPL--VR 299 (332)
Q Consensus 223 ~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 299 (332)
+..|+|||.+.. ..++.++|||||||++|||+||+.||..... ......+.... ... .+. ..+...... .+
T Consensus 67 ~~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~-~~~-~~~~~~~~~~~~~ 140 (176)
T smart00750 67 DPYFMAPEVIQG---QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGM-PAD-DPR-DRSNLESVSAARS 140 (176)
T ss_pred cccccChHHhcC---CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHh-ccC-Ccc-ccccHHHHHhhhh
Confidence 899999999876 6788999999999999999999999965422 11111111110 000 000 001111112 25
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 300 LAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 300 l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
+.+++.+||+.||++|||+.|+++.+..+.
T Consensus 141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 141 FADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 889999999999999999999999886543
No 406
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=5.7e-28 Score=211.60 Aligned_cols=192 Identities=23% Similarity=0.281 Sum_probs=161.0
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEe-C---CCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCC
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALL-S---TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPG 132 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~-~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 132 (332)
...+.|...+.||+|+|+.||++.. . ..+.||+|.+....... ....|+.+|..+ .+.||+++.+++..++
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~----ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPS----RILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCch----HHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3456788899999999999999983 2 56789999987554322 368999999888 5899999999999999
Q ss_pred ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC-CCceEEccCC
Q 020027 133 ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE-KFCARVCDYG 211 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~dfg 211 (332)
...+++||++.....++... ++...+..++..+..||+++|.+ ||||||+||+|+|.+. .+.-.|.|||
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred eeEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEech
Confidence 99999999999998888864 56788889999999999999999 9999999999999985 4566899999
Q ss_pred ccc-----------------cCCc---------------------------------ccCCcccccCcccccccCCCCCC
Q 020027 212 LSF-----------------LAPE---------------------------------EKRGLAGYVDDDYWHEKGGGNAT 241 (332)
Q Consensus 212 ~a~-----------------~~~~---------------------------------~~~~~~~~~~pe~~~~~~~~~~~ 241 (332)
+|. .... .+.||+||.|||++..- +.-+
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~--~~Qt 256 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC--PRQT 256 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc--cCcC
Confidence 873 0000 11589999999998764 5668
Q ss_pred chhhhHHHHHHHHHHHhCCCCCCc
Q 020027 242 RESDVYGFGVVLLEILSGRRCEEG 265 (332)
Q Consensus 242 ~~~DiwS~G~il~el~tg~~p~~~ 265 (332)
+++||||.|+|+.-+++++.||..
T Consensus 257 taiDiws~GVI~Lslls~~~PFf~ 280 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFFK 280 (418)
T ss_pred Cccceeeccceeehhhcccccccc
Confidence 999999999999999999999853
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=1.2e-25 Score=202.55 Aligned_cols=178 Identities=20% Similarity=0.210 Sum_probs=132.4
Q ss_pred ChHHHHHhcCCCCCCceeeccCCeEEEEEEeC--CCCEEEEEEeccCcc---cccccccHHHHHHHhccCCCCCccc-ee
Q 020027 52 PLTEIDAATDGFSHRRIIGQGRLGTVYAALLS--TGKLVAVKRIHPRLV---LSNAGFGFASVIKTLSLAQHPNIVP-IL 125 (332)
Q Consensus 52 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~-~~ 125 (332)
|.+......++|...+.||+|+||+||+|... +++.+|+|++..... .......+.+|+.+++.++|+|++. ++
T Consensus 9 ~~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~ 88 (365)
T PRK09188 9 PGDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLL 88 (365)
T ss_pred cccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEE
Confidence 33455566788999999999999999999853 677789998753311 1112234789999999999999985 44
Q ss_pred eeeecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCC-CCCCEEeCCCCc
Q 020027 126 GFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCI-KASNILLNEKFC 204 (332)
Q Consensus 126 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl-k~~Nill~~~~~ 204 (332)
++ +..+++|||+++++|.. ... .. ...++.|+++||.|||++ +|+|||| ||+|||++.++.
T Consensus 89 ~~----~~~~LVmE~~~G~~L~~-~~~-------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 89 AT----GKDGLVRGWTEGVPLHL-ARP-------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred Ec----CCcEEEEEccCCCCHHH-hCc-------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCC
Confidence 32 45799999999999963 211 11 135788999999999998 9999999 999999999999
Q ss_pred eEEccCCccccCCcc--------------cCCcccccCcccccccCC---CCCCchhhhH
Q 020027 205 ARVCDYGLSFLAPEE--------------KRGLAGYVDDDYWHEKGG---GNATRESDVY 247 (332)
Q Consensus 205 ~kl~dfg~a~~~~~~--------------~~~~~~~~~pe~~~~~~~---~~~~~~~Diw 247 (332)
+||+|||+|+..... ..++..|++||.+..... ...+..+|-|
T Consensus 151 ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 151 AAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred EEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 999999998744322 145677899998865421 2233445655
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-23 Score=188.18 Aligned_cols=252 Identities=21% Similarity=0.203 Sum_probs=185.7
Q ss_pred CCCCCceeeccCCeEEEEEEeCC--CCEEEEEEeccCcccccccccHHHHHHHhccCCC----CCccceeeee-ecCCce
Q 020027 62 GFSHRRIIGQGRLGTVYAALLST--GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH----PNIVPILGFS-QAPGER 134 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~-~~~~~~ 134 (332)
+|...+.||+|+||.||.+.... ...+|+|........... .+..|..++..+.. +++..+++.. ..++..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~--~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS--VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc--cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 79999999999999999999543 357888877654322222 45677787777752 5888888888 477788
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC-----CceEEcc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK-----FCARVCD 209 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-----~~~kl~d 209 (332)
++||+.+ |.+|.++..... ...++..+.++++.|++.+|.++|+. |++|||+||.|+++... ..+.+.|
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred EEEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 9999998 789999876544 23389999999999999999999999 99999999999999864 4689999
Q ss_pred CCccc--cC---------Cc-----ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHH
Q 020027 210 YGLSF--LA---------PE-----EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP 273 (332)
Q Consensus 210 fg~a~--~~---------~~-----~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~ 273 (332)
||+++ .. +. ...||..|.++..-.. ...+.+.|+||++-++.|+..|..||.+........
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~---~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~ 247 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG---IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKS 247 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC---CccCCchhhhhHHHHHHHHhcCCCCCccccccchHH
Confidence 99998 21 11 1138888888876554 678899999999999999999999997654322222
Q ss_pred HhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccc
Q 020027 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~ 329 (332)
.+........... .....+.++.+++..+-+.+...+|....+...|++..
T Consensus 248 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 248 KFEKDPRKLLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred HHHHHhhhhcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 2222111111111 11112235556666666789999999999998887654
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=2e-22 Score=180.30 Aligned_cols=254 Identities=29% Similarity=0.354 Sum_probs=192.2
Q ss_pred CCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCC-CccceeeeeecCCceeEEEec
Q 020027 63 FSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHP-NIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~ 140 (332)
|...+.||.|+||.||++... ..+++|.+........ ....+.+|+..++.+.|+ |++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999975 7899999987665443 344688999999999988 799999999777778999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC-ceEEccCCccccCC--
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF-CARVCDYGLSFLAP-- 217 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~dfg~a~~~~-- 217 (332)
+.++++.+++...... ..++......+..|++.++.|+|+. +++|||+||+||+++..+ .++++|||.++...
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999777654311 2378888999999999999999999 999999999999999988 79999999986432
Q ss_pred ----------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH----HHHHHHhhhcccccc
Q 020027 218 ----------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV----KWALPLIKEMRFSEL 283 (332)
Q Consensus 218 ----------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~ 283 (332)
....++..|++||..........+...|+||+|++++++++|..|+..... ......+...... .
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 234 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-S 234 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-c
Confidence 233678899999988652113678899999999999999999999766542 2333333222111 0
Q ss_pred cCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 284 LDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
................+.+++..|+..+|..|.+..+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 0000000000112236778999999999999998887654
No 410
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.90 E-value=3.4e-23 Score=171.78 Aligned_cols=140 Identities=16% Similarity=0.164 Sum_probs=107.0
Q ss_pred ceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccc-------cccH-----------------HHHHHHhccCCCCCcc
Q 020027 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNA-------GFGF-----------------ASVIKTLSLAQHPNIV 122 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~-------~~~~-----------------~~e~~~l~~l~h~niv 122 (332)
..||+|+||.||+|...+|+.||+|.+++....... ...| ..|+..+..+.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 579999999999999779999999999865322111 0111 2488899988877764
Q ss_pred ceeeeeecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHh-hcCCCCCeeecCCCCCCEEeCC
Q 020027 123 PILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYL-HQGVAPNIIHGCIKASNILLNE 201 (332)
Q Consensus 123 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~ivH~dlk~~Nill~~ 201 (332)
........ ..+++|||++++++........ .++......++.|++.+|.++ |+. +|+||||||+||+++
T Consensus 83 ~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~----~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 83 CPEPILLK--SHVLVMEFIGDDGWAAPRLKDA----PLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCcEEEec--CCEEEEEEeCCCCCcchhhhcC----CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 43333222 2389999999877655432221 278889999999999999999 687 999999999999998
Q ss_pred CCceEEccCCccccC
Q 020027 202 KFCARVCDYGLSFLA 216 (332)
Q Consensus 202 ~~~~kl~dfg~a~~~ 216 (332)
++.++++|||+|...
T Consensus 153 ~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCcEEEEEccccccC
Confidence 478999999998654
No 411
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.89 E-value=9.4e-23 Score=187.16 Aligned_cols=210 Identities=24% Similarity=0.317 Sum_probs=160.5
Q ss_pred hccCCCCCccceeeeeecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCC
Q 020027 113 LSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCI 192 (332)
Q Consensus 113 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl 192 (332)
|+.+.|.|+.++.|.+..++..+++.+||..|+|.+.+..... .+++.-...+..+++.||.|+|+. +-.+|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~---~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI---KLDYFFILSFIRDISKGLAYLHNS--PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc---CccHHHHHHHHHHHHHHHHHHhcC--cceeeeee
Confidence 4567899999999999999999999999999999999976332 278888999999999999999986 22399999
Q ss_pred CCCCEEeCCCCceEEccCCccccCCcc--------cCCcccccCcccccccCCCC----CCchhhhHHHHHHHHHHHhCC
Q 020027 193 KASNILLNEKFCARVCDYGLSFLAPEE--------KRGLAGYVDDDYWHEKGGGN----ATRESDVYGFGVVLLEILSGR 260 (332)
Q Consensus 193 k~~Nill~~~~~~kl~dfg~a~~~~~~--------~~~~~~~~~pe~~~~~~~~~----~~~~~DiwS~G~il~el~tg~ 260 (332)
+++|++++....+|++|||+.....+. .....-|.+||......... .+.++|+||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998766421 01234588999887642222 578899999999999999999
Q ss_pred CCCCch----hHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 261 RCEEGL----LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 261 ~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
.||... .+++....+.. .......|.+.... +....+..++..||..+|.+||++.++-..++.+..
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~-~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKK-GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred CccccccccCChHHHHHHHHh-cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 999752 22333333333 11122222222111 223368889999999999999999999998887643
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=2.1e-22 Score=164.88 Aligned_cols=249 Identities=20% Similarity=0.243 Sum_probs=179.6
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCC-CCccceeeeeecCCceeE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH-PNIVPILGFSQAPGERII 136 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~l 136 (332)
..++|...+.||.|+||.+|.|. ..+|+.||+|.-+.... .-....|.++.+.+++ ..|..+..+......-.+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 34578899999999999999999 78999999998654322 1235778888888875 456666667777788899
Q ss_pred EEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC---CCceEEccCCcc
Q 020027 137 VSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE---KFCARVCDYGLS 213 (332)
Q Consensus 137 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~dfg~a 213 (332)
||+.. |.+|+++..-..+. ++..+++.++-|++.-++|+|.+ +++||||||+|+|..- ...+.++|||+|
T Consensus 89 VMdLL-GPsLEdLfnfC~R~---ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLa 161 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFNFCSRR---FTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLA 161 (341)
T ss_pred eeecc-CccHHHHHHHHhhh---hhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccch
Confidence 99998 78999888654433 78899999999999999999999 9999999999999963 456889999999
Q ss_pred ccCCcc-------------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHH---HHHhhh
Q 020027 214 FLAPEE-------------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWA---LPLIKE 277 (332)
Q Consensus 214 ~~~~~~-------------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~---~~~~~~ 277 (332)
+..-+. -.||..|.+-..... ..-+.+.|+-|+|-+|...--|..||+|..+... +..+.+
T Consensus 162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~g---~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~E 238 (341)
T KOG1163|consen 162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHLG---IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISE 238 (341)
T ss_pred hhhccccccccCccccCCccceeeeehhhhhhhh---hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHH
Confidence 643221 147777766544333 4557789999999999998889999998754332 122222
Q ss_pred cccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 020027 278 MRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILN 326 (332)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~ 326 (332)
.+..-.+.. +. ..-+.++...+..|-..--++-|+-.-+.+.+.
T Consensus 239 kK~s~~ie~-LC----~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 239 KKMSTPIEV-LC----KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred hhcCCCHHH-Hh----CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 221110000 00 011336777777887777777777665554443
No 413
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=3.4e-22 Score=166.21 Aligned_cols=141 Identities=17% Similarity=0.119 Sum_probs=109.4
Q ss_pred CceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccc------------------------cccHHHHHHHhccCCCCCc
Q 020027 66 RRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNA------------------------GFGFASVIKTLSLAQHPNI 121 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~------------------------~~~~~~e~~~l~~l~h~ni 121 (332)
...||+|+||.||+|...+|+.||+|.+++....... ......|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999778999999999876321110 0012467888989999887
Q ss_pred cceeeeeecCCceeEEEeccCCCCHHHH-hcccCCCCCcCCHHHHHHHHHHHHHHHHHhhc-CCCCCeeecCCCCCCEEe
Q 020027 122 VPILGFSQAPGERIIVSEFINMASLDFY-LHENNDGASLLDWNRRLRIATGAARGLEYLHQ-GVAPNIIHGCIKASNILL 199 (332)
Q Consensus 122 v~~~~~~~~~~~~~lv~e~~~~~~L~~~-l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill 199 (332)
.....+.... .+++|||++++++... +... .++......++.|++.++.++|+ . ||+||||||+||++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKDV-----PLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhhc-----cCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 5554443332 4899999988755433 3321 26778889999999999999999 8 99999999999999
Q ss_pred CCCCceEEccCCccccCC
Q 020027 200 NEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 200 ~~~~~~kl~dfg~a~~~~ 217 (332)
+ ++.++++|||++....
T Consensus 152 ~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 152 H-DGKPYIIDVSQAVELD 168 (190)
T ss_pred E-CCCEEEEEcccceecC
Confidence 8 7899999999997654
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=1.9e-23 Score=199.94 Aligned_cols=246 Identities=19% Similarity=0.174 Sum_probs=171.5
Q ss_pred CCCceeeccCCeEEEEEE-eCCCCEEEEEEeccC---cccccc-cccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 64 SHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPR---LVLSNA-GFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 64 ~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.....+|.|++|.|+... ....+..+.|..+.. ...... ...+..|..+-..+.|+|++.......+.....-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 355789999999777665 334444555544321 111111 112556667778899999988887776655555559
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC-
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP- 217 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~- 217 (332)
|||++ +|..++..... +....+..++.|+..|+.|+|+. |+.|||+|++|++++.++.+||+|||.+....
T Consensus 401 E~~~~-Dlf~~~~~~~~----~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGK----LTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred hcccH-HHHHHHhcccc----cchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeecc
Confidence 99998 99998876522 66677888999999999999999 99999999999999999999999999874321
Q ss_pred ---------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHH-HHhhhcccccccCCc
Q 020027 218 ---------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWAL-PLIKEMRFSELLDPR 287 (332)
Q Consensus 218 ---------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~ 287 (332)
....|...|+|||..... .......||||.|+++..|.+|+.||.-....... ...........
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~--~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~---- 546 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGK--EYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNI---- 546 (601)
T ss_pred CcchhhhhhcCcccCCcCcCccccccc--ccCcchhhhhhccceEEEEecCCCccccccccccchhhhcccccccc----
Confidence 223578899999998873 23346789999999999999999998643222111 00110000000
Q ss_pred CCCCCC--hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 288 LAIPCE--IKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 288 ~~~~~~--~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
...+.. ...+.+...++.++++.||.+|-|+++|++
T Consensus 547 ~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 547 FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 001111 112234567889999999999999999975
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.88 E-value=1.2e-22 Score=170.71 Aligned_cols=174 Identities=13% Similarity=0.098 Sum_probs=133.2
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccc-c------HHHHHHHhccCCCCCccceeeeeec
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF-G------FASVIKTLSLAQHPNIVPILGFSQA 130 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~-~------~~~e~~~l~~l~h~niv~~~~~~~~ 130 (332)
...++|...+.+|.|+||.||.... ++..+|+|.+++......... . +.+|+..+.+++|++|..+.+++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 4567899999999999999999665 577899999986654332211 1 5789999999999999999888543
Q ss_pred C--------CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC
Q 020027 131 P--------GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202 (332)
Q Consensus 131 ~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 202 (332)
. +..+++|||++|.+|.++.. ++. ....+++.++..+|+. |++|||++|+|++++.+
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~ 171 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKN 171 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCC
Confidence 2 35789999999999988732 232 2456899999999999 99999999999999988
Q ss_pred CceEEccCCccccCCcccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHH
Q 020027 203 FCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL 257 (332)
Q Consensus 203 ~~~kl~dfg~a~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~ 257 (332)
+ ++++|||......+..... .+... ..+..++|+||||+.+.-..
T Consensus 172 g-i~liDfg~~~~~~e~~a~d------~~vle---r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAKD------RIDLE---RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhhHH------HHHHH---hHhcccccccceeEeehHHH
Confidence 8 9999999886654322110 01122 34557899999999887654
No 416
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=7e-21 Score=162.68 Aligned_cols=195 Identities=21% Similarity=0.282 Sum_probs=157.6
Q ss_pred cCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeeeeecCCceeEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGFSQAPGERIIV 137 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 137 (332)
.-+|...+.||+|+||..+.|+ +-+++.||||.-.... +.-.+..|....+.|. .++|-.++=|....-+-.+|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 3478999999999999999999 6689999999753221 1224567777777774 67888888777777777899
Q ss_pred EeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC-----CceEEccCCc
Q 020027 138 SEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK-----FCARVCDYGL 212 (332)
Q Consensus 138 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-----~~~kl~dfg~ 212 (332)
+|++ |.+|+++..-.++. ++..+++.++.|+..-++|+|++ .+|-|||||+|+||... ..+.+.|||+
T Consensus 103 idLL-GPSLEDLFD~CgR~---FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm 175 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGRR---FSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM 175 (449)
T ss_pred hhhh-CcCHHHHHHHhcCc---ccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccc
Confidence 9998 78999988655443 89999999999999999999999 99999999999999753 3578999999
Q ss_pred cccCCc-------------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhH
Q 020027 213 SFLAPE-------------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLV 268 (332)
Q Consensus 213 a~~~~~-------------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~ 268 (332)
|+...+ +..||..||+-.. +.|.+-+.+.|+-|+|-++...+-|..||.|...
T Consensus 176 AK~YrDp~TkqHIPYrE~KSLsGTARYMSINT---HlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 176 AKEYRDPKTKQHIPYREHKSLSGTARYMSINT---HLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred hhhhcCccccccCccccccccccceeeeEeec---cccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 965422 1258899987543 3446778899999999999999999999998643
No 417
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=3e-20 Score=153.19 Aligned_cols=181 Identities=13% Similarity=0.066 Sum_probs=132.5
Q ss_pred CCCceeeccCCeEEEEEEeCCCCEEEEEEeccCccccc--ccccHHHHHHHhccCC-CCCccceeeeeecCCceeEEEec
Q 020027 64 SHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN--AGFGFASVIKTLSLAQ-HPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 64 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
.....|++|+||+||.+.. .+..++.+.+........ ....+.+|+++|++++ |+++.+++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3457899999999997666 677788776654332111 1113678999999995 5789999886 346899999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCC-CCCCEEeCCCCceEEccCCccccCCcc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCI-KASNILLNEKFCARVCDYGLSFLAPEE 219 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl-k~~Nill~~~~~~kl~dfg~a~~~~~~ 219 (332)
++|.+|...... ....++.|++.++.++|++ ||+|||| ||+|||++.++.++|+|||++......
T Consensus 80 I~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 80 LAGAAMYQRPPR-----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred ecCccHHhhhhh-----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 999888653311 1134678999999999999 9999999 799999999999999999999754332
Q ss_pred c-------------------CCcccccCcccccccCCCCCC-chhhhHHHHHHHHHHHhCCCCCCc
Q 020027 220 K-------------------RGLAGYVDDDYWHEKGGGNAT-RESDVYGFGVVLLEILSGRRCEEG 265 (332)
Q Consensus 220 ~-------------------~~~~~~~~pe~~~~~~~~~~~-~~~DiwS~G~il~el~tg~~p~~~ 265 (332)
. ..++.|++|+.-.-. ...+ ...+.++-|.-+|.++|++.++.+
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l--~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVL--KRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhh--ccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 2 124555555432211 1233 567888999999999999887654
No 418
>PRK10345 hypothetical protein; Provisional
Probab=99.84 E-value=3e-20 Score=155.66 Aligned_cols=135 Identities=18% Similarity=0.195 Sum_probs=103.4
Q ss_pred CCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccC-----CCCCccceeeeeecCC---c-
Q 020027 63 FSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-----QHPNIVPILGFSQAPG---E- 133 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~---~- 133 (332)
+...+.||+|+||.||. .-.++.. +||++...... ....+.+|+..++.+ +||||++++|++.++. .
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~--~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDG--GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccc--hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 45568899999999996 3234444 79988764322 223579999999998 5799999999998763 4
Q ss_pred eeEEEec--cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHH-HHhhcCCCCCeeecCCCCCCEEeCC----CCceE
Q 020027 134 RIIVSEF--INMASLDFYLHENNDGASLLDWNRRLRIATGAARGL-EYLHQGVAPNIIHGCIKASNILLNE----KFCAR 206 (332)
Q Consensus 134 ~~lv~e~--~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l-~~Lh~~~~~~ivH~dlk~~Nill~~----~~~~k 206 (332)
+.+++|| +++++|.+++++.. +++. ..++.|++.++ .|||++ +|+||||||+|||++. +..++
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~~-----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~ 149 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQCR-----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPV 149 (210)
T ss_pred EEEEecCCCCcchhHHHHHHccc-----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEE
Confidence 3478999 56799999996532 4444 35577888777 899999 9999999999999974 34799
Q ss_pred EccCC
Q 020027 207 VCDYG 211 (332)
Q Consensus 207 l~dfg 211 (332)
|+||+
T Consensus 150 LiDg~ 154 (210)
T PRK10345 150 VCDNI 154 (210)
T ss_pred EEECC
Confidence 99954
No 419
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.7e-21 Score=179.29 Aligned_cols=225 Identities=21% Similarity=0.202 Sum_probs=175.1
Q ss_pred eeeccCCeEEEEEE----eCCCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeeeeecCCceeEEEeccC
Q 020027 68 IIGQGRLGTVYAAL----LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGFSQAPGERIIVSEFIN 142 (332)
Q Consensus 68 ~lg~G~~g~V~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 142 (332)
++|+|.||.|+.++ ...|..+|.|.+++.............|-.++...+ ||-+++++-.+..++..+++.++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999876 346778999998876654444334466777788886 9999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc--
Q 020027 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK-- 220 (332)
Q Consensus 143 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~-- 220 (332)
+|.+...+..... ++......+...++-++.++|+. ++++||+|++||+++.+|.+++.|||+++..-+..
T Consensus 81 gg~lft~l~~~~~----f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 81 GGDLFTRLSKEVM----FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred cchhhhccccCCc----hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 9998776654332 55666666777889999999998 99999999999999999999999999998764433
Q ss_pred CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHH
Q 020027 221 RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRL 300 (332)
Q Consensus 221 ~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (332)
+||..|||||... ....++|.||||++++||+||..||.+ +....+... ....+..-...+
T Consensus 154 cgt~eymApEI~~-----gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~----------~~~~p~~l~~~a 214 (612)
T KOG0603|consen 154 CGTYEYRAPEIIN-----GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKA----------ELEMPRELSAEA 214 (612)
T ss_pred ccchhhhhhHhhh-----ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhh----------ccCCchhhhHHH
Confidence 6799999999875 357799999999999999999999988 233333221 122222333355
Q ss_pred HHHHHHcccCCCCCCCCH
Q 020027 301 AKVALACVGNSRKNRPSI 318 (332)
Q Consensus 301 ~~l~~~c~~~dp~~RPs~ 318 (332)
.+++......+|.+|--.
T Consensus 215 ~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 215 RSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHhhCHHHHhcc
Confidence 577778888888888643
No 420
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.83 E-value=5.7e-21 Score=184.61 Aligned_cols=246 Identities=20% Similarity=0.172 Sum_probs=176.3
Q ss_pred CCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCccc--ccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 62 GFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVL--SNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
++...+.||++.|=+|.+|+...|. |+||++-+.... -+.......|++ ...++|||++.+.-+-..+...|++-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 6777889999999999999987776 888988655421 122223455555 566799999999888777778888889
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc--cCC
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF--LAP 217 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~--~~~ 217 (332)
|.. .+|++.+.... .+..-+..-|+.|++.|+.-+|.. ||+|+|||.+|||++.-+-+.|+||..=+ ..+
T Consensus 102 yvk-hnLyDRlSTRP----FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 102 YVK-HNLYDRLSTRP----FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHh-hhhhhhhccch----HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCC
Confidence 885 58888775432 255566677999999999999998 99999999999999999999999997532 122
Q ss_pred cc-----------cCCcccccCcccccccC--------CCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhh
Q 020027 218 EE-----------KRGLAGYVDDDYWHEKG--------GGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKE 277 (332)
Q Consensus 218 ~~-----------~~~~~~~~~pe~~~~~~--------~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~ 277 (332)
++ ......|.|||.+-... ....+++=||||+||++.||++ |+++|.-...- .+ +.
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~-aY---r~ 249 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLL-AY---RS 249 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHH-hH---hc
Confidence 21 13345799999886532 1226788899999999999999 67777532110 00 11
Q ss_pred cc--cccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 020027 278 MR--FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNL 328 (332)
Q Consensus 278 ~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~ 328 (332)
+. ..+.+-..+. . ..+..++..+++.||.+|-|+++.++.=+++
T Consensus 250 ~~~~~~e~~Le~Ie--d-----~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 250 GNADDPEQLLEKIE--D-----VSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred cCccCHHHHHHhCc--C-----ccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 10 0000000000 0 1466889999999999999999999886554
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=3.2e-20 Score=162.15 Aligned_cols=192 Identities=19% Similarity=0.186 Sum_probs=134.0
Q ss_pred CCCCccceeeeeecC---------------------------CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHH
Q 020027 117 QHPNIVPILGFSQAP---------------------------GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIA 169 (332)
Q Consensus 117 ~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~ 169 (332)
+|||||+++++|.++ ...|++|.-.+ .+|.+|+.... .+.....-|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~-----~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH-----RSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC-----CchHHHHHHH
Confidence 599999999876321 24588888774 68999997654 3455566788
Q ss_pred HHHHHHHHHhhcCCCCCeeecCCCCCCEEe--CCCC--ceEEccCCccccCCc------------ccCCcccccCccccc
Q 020027 170 TGAARGLEYLHQGVAPNIIHGCIKASNILL--NEKF--CARVCDYGLSFLAPE------------EKRGLAGYVDDDYWH 233 (332)
Q Consensus 170 ~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill--~~~~--~~kl~dfg~a~~~~~------------~~~~~~~~~~pe~~~ 233 (332)
.|+++|+.|||.+ |+.|||+|..|||+ +++. ...++|||++..... +.-|-..-||||...
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 9999999999999 99999999999998 3443 467899998743221 113455679999886
Q ss_pred ccCCCC---CCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh-cccccccCCcCCCCCChHHHHHHHHHHHHccc
Q 020027 234 EKGGGN---ATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE-MRFSELLDPRLAIPCEIKPLVRLAKVALACVG 309 (332)
Q Consensus 234 ~~~~~~---~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~ 309 (332)
...|.. .-.++|.|+.|.+.||+++...||.+.-. +..+ ..+++-.- .+-+..++..+.+++...++
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe-----m~L~~r~Yqe~qL----Palp~~vpp~~rqlV~~lL~ 495 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE-----MLLDTRTYQESQL----PALPSRVPPVARQLVFDLLK 495 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch-----heechhhhhhhhC----CCCcccCChHHHHHHHHHhc
Confidence 543322 34689999999999999999999976210 0111 11111111 11122333356688889999
Q ss_pred CCCCCCCCHHHHHHHHh
Q 020027 310 NSRKNRPSIVQVATILN 326 (332)
Q Consensus 310 ~dp~~RPs~~~i~~~L~ 326 (332)
.||.+|||..-..+.|.
T Consensus 496 r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 496 RDPSKRVSPNIAANVLN 512 (598)
T ss_pred CCccccCCccHHHhHHH
Confidence 99999999876665543
No 422
>smart00090 RIO RIO-like kinase.
Probab=99.81 E-value=2.2e-19 Score=153.90 Aligned_cols=143 Identities=17% Similarity=0.145 Sum_probs=108.7
Q ss_pred CCCCCceeeccCCeEEEEEE--eCCCCEEEEEEeccCcccccc----------------------cccHHHHHHHhccCC
Q 020027 62 GFSHRRIIGQGRLGTVYAAL--LSTGKLVAVKRIHPRLVLSNA----------------------GFGFASVIKTLSLAQ 117 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~~~~----------------------~~~~~~e~~~l~~l~ 117 (332)
.|...+.||+|+||.||+|. ..+|+.||+|.++........ ...+..|+..+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 578999999999864321100 012457888888887
Q ss_pred CCC--ccceeeeeecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCC-eeecCCCC
Q 020027 118 HPN--IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN-IIHGCIKA 194 (332)
Q Consensus 118 h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~-ivH~dlk~ 194 (332)
+.+ +.+++++ +..+++|||+++.++..+..... .........++.|++.++.+||++ + ++|||+||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV----EPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccC----CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 532 3333432 23489999999888766542221 145556778999999999999999 9 99999999
Q ss_pred CCEEeCCCCceEEccCCccccC
Q 020027 195 SNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 195 ~Nill~~~~~~kl~dfg~a~~~ 216 (332)
+||+++ ++.++++|||.+...
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhcc
Confidence 999999 889999999988654
No 423
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=2.1e-19 Score=155.67 Aligned_cols=235 Identities=17% Similarity=0.174 Sum_probs=142.7
Q ss_pred CCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-ccccHHHHHHHhccCC----------CCCccceeeeee-
Q 020027 63 FSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQ----------HPNIVPILGFSQ- 129 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~----------h~niv~~~~~~~- 129 (332)
+.....||.|+++.||.+. -.+|+.+|+|.......... ....+.+|.-....+. |-.++--++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 3456789999999999999 46799999998875542222 1223444443333322 112222222221
Q ss_pred --------cC---C-----ceeEEEeccCCCCHHHHhcc---cCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeec
Q 020027 130 --------AP---G-----ERIIVSEFINMASLDFYLHE---NNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHG 190 (332)
Q Consensus 130 --------~~---~-----~~~lv~e~~~~~~L~~~l~~---~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~ 190 (332)
.. + ..+++|.-+ .++|.+++.. .......+...-++.+..|+.+.+++||+. |++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 11 1 235677777 4688877542 222112233445667789999999999999 99999
Q ss_pred CCCCCCEEeCCCCceEEccCCccccCCccc---CCcccccCccccccc-----CCCCCCchhhhHHHHHHHHHHHhCCCC
Q 020027 191 CIKASNILLNEKFCARVCDYGLSFLAPEEK---RGLAGYVDDDYWHEK-----GGGNATRESDVYGFGVVLLEILSGRRC 262 (332)
Q Consensus 191 dlk~~Nill~~~~~~kl~dfg~a~~~~~~~---~~~~~~~~pe~~~~~-----~~~~~~~~~DiwS~G~il~el~tg~~p 262 (332)
||+|+|++++.+|.+.++||+......... ..+..|.+||..... ....++.+.|.|++|+++|.+++++.|
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lP 249 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLP 249 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-S
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCC
Confidence 999999999999999999998765443322 234667888866442 123578899999999999999999999
Q ss_pred CCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCC
Q 020027 263 EEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNR 315 (332)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~R 315 (332)
|........... .+. .+. +.++.+..++...+++||.+|
T Consensus 250 f~~~~~~~~~~~------------~f~-~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 250 FGLSSPEADPEW------------DFS-RCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp TCCCGGGSTSGG------------GGT-TSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCccccccc------------cch-hcC-CcCHHHHHHHHHHccCCcccC
Confidence 986533222110 111 111 334567799999999999988
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=7.1e-19 Score=172.48 Aligned_cols=249 Identities=23% Similarity=0.267 Sum_probs=176.0
Q ss_pred ChHHHHHhcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCC---CCCccceeeee
Q 020027 52 PLTEIDAATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ---HPNIVPILGFS 128 (332)
Q Consensus 52 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~ 128 (332)
+..+.+.....|.+.+.+|+|+||.||+|...+|+.||+|.-++... ++|.=..+++.+|+ -+.|..+....
T Consensus 689 ~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~-----WEfYI~~q~~~RLk~~~~~~~~~~~~a~ 763 (974)
T KOG1166|consen 689 PNTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP-----WEFYICLQVMERLKPQMLPSIMHISSAH 763 (974)
T ss_pred ccceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc-----eeeeehHHHHHhhchhhhcchHHHHHHH
Confidence 34455566778999999999999999999977799999999776542 23332334455554 24555565555
Q ss_pred ecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeC-------C
Q 020027 129 QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLN-------E 201 (332)
Q Consensus 129 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-------~ 201 (332)
.-.+..++++||.+.|+|.++++.. ..++|..++.++.|++.-+..||.. +|||+||||+|+|+. +
T Consensus 764 ~~~~~S~lv~ey~~~Gtlld~~N~~----~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~ 836 (974)
T KOG1166|consen 764 VFQNASVLVSEYSPYGTLLDLINTN----KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSD 836 (974)
T ss_pred ccCCcceeeeeccccccHHHhhccC----CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCc
Confidence 6667789999999999999999833 3389999999999999999999999 999999999999994 2
Q ss_pred CCceEEccCCcccc---CCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHH
Q 020027 202 KFCARVCDYGLSFL---APEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALP 273 (332)
Q Consensus 202 ~~~~kl~dfg~a~~---~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~ 273 (332)
+..++|+|||.|-- .++. ..+|-.+-++|...+ .+++.++|.|.++.+++-|+.|+.- .
T Consensus 837 ~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~g---rpWtYq~DyfGlAa~~h~mLFG~y~----------q 903 (974)
T KOG1166|consen 837 SKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREG---RPWTYQIDYFGLAATVHVMLFGKYM----------E 903 (974)
T ss_pred ccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcC---CCCchhhhhHHHHHHHHHHHHHHHH----------H
Confidence 45689999998832 2332 134556666676655 8999999999999999999987531 1
Q ss_pred HhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcccc
Q 020027 274 LIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATILNNLVG 330 (332)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L~~~~~ 330 (332)
...+.... .+.. .+... ..+-..++....|..|-..=|...++...|++++.
T Consensus 904 -~~~g~~~~-~~~~--~~Ry~-~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 904 -VKNGSSWM-VKTN--FPRYW-KRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred -hcCCccee-cccc--chhhh-hHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence 11111111 1111 11000 11123356666776666666888888888887653
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=1.1e-18 Score=147.72 Aligned_cols=136 Identities=22% Similarity=0.279 Sum_probs=112.5
Q ss_pred ceeeccCCeEEEEEEeCCCCEEEEEEeccCccccc------ccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEec
Q 020027 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN------AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEF 140 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 140 (332)
+.||+|++|.||+|.. +|..+++|.......... ....+.+|+..+..++|+|+.....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 677899998654332111 112367889999999999988887777777788999999
Q ss_pred cCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 141 INMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 141 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++|++|.+++... .+ ....++.+++.++.++|+. +++|+|++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988642 12 6788999999999999998 999999999999999 78899999998865
No 426
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.78 E-value=2.6e-18 Score=143.91 Aligned_cols=139 Identities=18% Similarity=0.109 Sum_probs=106.5
Q ss_pred CCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCccccc--------------------ccccHHHHHHHhccCCCCC
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN--------------------AGFGFASVIKTLSLAQHPN 120 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~h~n 120 (332)
..|...+.||+|+||.||++...+|+.||+|.++....... .......|+..+..+.|++
T Consensus 15 ~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 15 VVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred chhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 34777889999999999999988899999998765331100 0012466788888887764
Q ss_pred --ccceeeeeecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEE
Q 020027 121 --IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNIL 198 (332)
Q Consensus 121 --iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nil 198 (332)
+...++ .+..+++|||+++++|...... .....++.+++.++.++|+. +++|+||+|+||+
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nil 157 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNIL 157 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEE
Confidence 333333 2445899999999988765421 22456888999999999998 9999999999999
Q ss_pred eCCCCceEEccCCccccC
Q 020027 199 LNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 199 l~~~~~~kl~dfg~a~~~ 216 (332)
+++++.++++|||++...
T Consensus 158 l~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 158 VDDDEKIYIIDWPQMVST 175 (198)
T ss_pred EcCCCcEEEEECCccccC
Confidence 999999999999998544
No 427
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.78 E-value=3.3e-18 Score=164.12 Aligned_cols=140 Identities=19% Similarity=0.206 Sum_probs=110.5
Q ss_pred cCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCccccc------ccccHHHHHHHhccCCCCCccceeeeeecCCc
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN------AGFGFASVIKTLSLAQHPNIVPILGFSQAPGE 133 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 133 (332)
...|...+.||+|+||.||+|.+... .+++|+......... ....+.+|+.+++.++|+|++....++..+..
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 34456678999999999999987443 444444322211111 11246789999999999999988777777777
Q ss_pred eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 134 RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
.+++|||+++++|.+++. ....++.|+++++.+||+. +++|||+||+||++ +++.++++|||++
T Consensus 411 ~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 899999999999998774 2456889999999999998 99999999999999 6778999999998
Q ss_pred ccC
Q 020027 214 FLA 216 (332)
Q Consensus 214 ~~~ 216 (332)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 753
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.76 E-value=4e-18 Score=142.89 Aligned_cols=133 Identities=22% Similarity=0.292 Sum_probs=106.0
Q ss_pred eeeccCCeEEEEEEeCCCCEEEEEEeccCccccc------ccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEecc
Q 020027 68 IIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN------AGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 68 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 141 (332)
.||+|+||.||+|.. +|..+++|.......... ....+.+|+..+..++|+++.....++...+..+++|||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 678899998654321111 1123568999999998887666666666667789999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
++++|.+++.... . .++.+++.+|.++|+. +++|+|++|.||+++ ++.+++.|||++...
T Consensus 80 ~g~~l~~~~~~~~-------~----~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN-------D----ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH-------H----HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999998875321 0 6789999999999998 999999999999999 889999999988653
No 429
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.75 E-value=2.3e-18 Score=166.47 Aligned_cols=199 Identities=20% Similarity=0.232 Sum_probs=140.9
Q ss_pred cCCCCCCceeeccCCeEEEEEEe-CCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL-STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
.++|+.++++..|+||.||.++. .+.+.+|.|.-+ +.. +.+- ++....+|-+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~l-------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QNL-------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cch-------hhhc--cccccCCccee----------------
Confidence 46899999999999999999985 466788884322 211 1110 11112222222
Q ss_pred eccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC--
Q 020027 139 EFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA-- 216 (332)
Q Consensus 139 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~-- 216 (332)
|+-...++..+. ++. +++.+++|||+. +|+|||+||.|.+++.-|.+|+.|||++.+.
T Consensus 136 -----gDc~tllk~~g~----lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 -----GDCATLLKNIGP----LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred -----chhhhhcccCCC----Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhh
Confidence 333333432221 222 237789999998 9999999999999999999999999987431
Q ss_pred -------------------CcccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhh
Q 020027 217 -------------------PEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKE 277 (332)
Q Consensus 217 -------------------~~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~ 277 (332)
....+||+.|+|||+... ..|...+|.|++|+|+||.+-|..||.+..+++.+..+..
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr---qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vis 272 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR---QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS 272 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhh---hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhh
Confidence 112268999999999987 5688899999999999999999999999988887655433
Q ss_pred c--ccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCC
Q 020027 278 M--RFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRP 316 (332)
Q Consensus 278 ~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RP 316 (332)
. .+.+- +.....++.+++.+.+..+|..|-
T Consensus 273 d~i~wpE~---------dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 273 DDIEWPEE---------DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhcccccc---------CcCCCHHHHHHHHHHHHhChHhhc
Confidence 1 11111 112223677899999999999994
No 430
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.71 E-value=8.1e-17 Score=133.52 Aligned_cols=138 Identities=19% Similarity=0.199 Sum_probs=95.6
Q ss_pred CceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccH----------------------HHHHHHhccCCCCC--c
Q 020027 66 RRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGF----------------------ASVIKTLSLAQHPN--I 121 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~----------------------~~e~~~l~~l~h~n--i 121 (332)
.+.||+|+||.||+|...+|+.||+|.+++........... ..|...+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999997789999999987643222111111 23444444443322 2
Q ss_pred cceeeeeecCCceeEEEeccCCCCHHH-HhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhc-CCCCCeeecCCCCCCEEe
Q 020027 122 VPILGFSQAPGERIIVSEFINMASLDF-YLHENNDGASLLDWNRRLRIATGAARGLEYLHQ-GVAPNIIHGCIKASNILL 199 (332)
Q Consensus 122 v~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~ivH~dlk~~Nill 199 (332)
.+.++. ...+++|||++++.+.. .+.... .. .....++.+++.++.++|+ . +++|+|+||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 333332 24589999999854321 111110 11 4567889999999999998 7 99999999999999
Q ss_pred CCCCceEEccCCccccCC
Q 020027 200 NEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 200 ~~~~~~kl~dfg~a~~~~ 217 (332)
+ ++.++++|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8899999999986543
No 431
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.70 E-value=1.2e-17 Score=151.38 Aligned_cols=166 Identities=20% Similarity=0.267 Sum_probs=122.4
Q ss_pred ceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCc
Q 020027 133 ERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGL 212 (332)
Q Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~ 212 (332)
.++|.|++|...+|.+|+..... ....++...+.++.|++.|+.| + +.+|+|+||.||+...+..+||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~-~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT-GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc-ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 47899999999999999975433 2236788889999999999999 5 899999999999999999999999998
Q ss_pred cccCCcc------------cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcc
Q 020027 213 SFLAPEE------------KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMR 279 (332)
Q Consensus 213 a~~~~~~------------~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 279 (332)
....... ..||..||+||.+.+ ..|+.++||||||++|+|+++ -...+... ..+..+.++.
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g---~~y~~kvdIyaLGlil~EL~~~f~T~~er~---~t~~d~r~g~ 476 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRG---QQYSEKVDIYALGLILAELLIQFSTQFERI---ATLTDIRDGI 476 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhh---hhhhhhcchhhHHHHHHHHHHHhccHHHHH---HhhhhhhcCC
Confidence 6433221 258999999999887 789999999999999999997 22222111 1112222322
Q ss_pred cccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHH
Q 020027 280 FSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQ 320 (332)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~ 320 (332)
+. +......+ +-..++.+++...|.+||++.+
T Consensus 477 ip----~~~~~d~p-----~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 477 IP----PEFLQDYP-----EEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred CC----hHHhhcCc-----HHHHHHHHhcCCCcccCchHHH
Confidence 21 11111222 3347888999999999994443
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.68 E-value=3.6e-16 Score=124.42 Aligned_cols=135 Identities=20% Similarity=0.179 Sum_probs=111.2
Q ss_pred CCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCC--CCccceeeeeecCCceeEEEeccC
Q 020027 65 HRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--PNIVPILGFSQAPGERIIVSEFIN 142 (332)
Q Consensus 65 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~ 142 (332)
+.+.||+|.++.||++...+ ..+++|....... ...+..|+..++.++| .++.+++++...++..++++||++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~ 76 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIE 76 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecC
Confidence 45679999999999999754 7899998865432 2357889999999876 588899888888788999999998
Q ss_pred CCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 143 MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 143 ~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
++.+..+ +......++.+++++++++|.....+++|+|++|+||++++++.+++.|||.+..
T Consensus 77 g~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 77 GETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CeecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 8766543 3455667889999999999986445799999999999999989999999998754
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.65 E-value=1.6e-15 Score=130.37 Aligned_cols=138 Identities=17% Similarity=0.125 Sum_probs=103.6
Q ss_pred Cceee-ccCCeEEEEEEeCCCCEEEEEEeccCcc-----c------ccccccHHHHHHHhccCCCCCc--cceeeeeecC
Q 020027 66 RRIIG-QGRLGTVYAALLSTGKLVAVKRIHPRLV-----L------SNAGFGFASVIKTLSLAQHPNI--VPILGFSQAP 131 (332)
Q Consensus 66 ~~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~------~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~ 131 (332)
...|| .|+.|+||.+... +..+++|....... . ......+.+|+..+..++|+++ .+.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35688 8999999998874 67899998753211 0 0112246789999999988775 5666664332
Q ss_pred -C---ceeEEEeccCC-CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceE
Q 020027 132 -G---ERIIVSEFINM-ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCAR 206 (332)
Q Consensus 132 -~---~~~lv~e~~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 206 (332)
+ ..+++||++++ .+|.+++.... ++.. .+.+++.++.+||+. ||+||||||.|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~-----l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEAP-----LSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcCC-----CCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 2 23599999997 68988875421 3433 356899999999999 999999999999999988999
Q ss_pred EccCCccccC
Q 020027 207 VCDYGLSFLA 216 (332)
Q Consensus 207 l~dfg~a~~~ 216 (332)
++|||.+...
T Consensus 183 LIDfg~~~~~ 192 (239)
T PRK01723 183 LIDFDRGELR 192 (239)
T ss_pred EEECCCcccC
Confidence 9999988653
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=2.3e-17 Score=158.26 Aligned_cols=248 Identities=20% Similarity=0.202 Sum_probs=179.0
Q ss_pred cCCCCCCceeeccCCeEEEEEEe--CCCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeeeeecCCceeE
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALL--STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGFSQAPGERII 136 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l 136 (332)
...|...+.||+|+|+.|-.... .....+|.|.+...............|..+-..+. |+|++++++....++..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 45678888899999999987764 34456777766544322222222344666666665 9999999999999999999
Q ss_pred EEeccCCCCHHHHh-cccCCCCCcCCHHHHHHHHHHHHHHHHHhh-cCCCCCeeecCCCCCCEEeCCCC-ceEEccCCcc
Q 020027 137 VSEFINMASLDFYL-HENNDGASLLDWNRRLRIATGAARGLEYLH-QGVAPNIIHGCIKASNILLNEKF-CARVCDYGLS 213 (332)
Q Consensus 137 v~e~~~~~~L~~~l-~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh-~~~~~~ivH~dlk~~Nill~~~~-~~kl~dfg~a 213 (332)
.+++..++++...+ ..... ..+......++.|+..++.|+| .. ++.|||+||+|.+++..+ ..+++|||+|
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~---~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~A 172 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDST---GTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLA 172 (601)
T ss_pred ccCcccccccccccccCCcc---CCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhh
Confidence 99999999998887 33221 2445556778999999999999 77 999999999999999999 9999999998
Q ss_pred ccCCc---------ccCC-cccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccc
Q 020027 214 FLAPE---------EKRG-LAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSEL 283 (332)
Q Consensus 214 ~~~~~---------~~~~-~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 283 (332)
..... ...| +..|++||..... ....+..|+||.|+++.-+++|..|+........ .+...
T Consensus 173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~--~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-------~~~~~ 243 (601)
T KOG0590|consen 173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGK--AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-------RYSSW 243 (601)
T ss_pred ccccccCCcceeeecccCCCCCCCCcccccch--hhcCCCcccccccccccccccCCCCccccccccc-------cceee
Confidence 65443 1257 8899999988764 3556889999999999999999999865433221 11111
Q ss_pred cCCc--CCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 020027 284 LDPR--LAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVA 322 (332)
Q Consensus 284 ~~~~--~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~ 322 (332)
.... ........-.....++..+++..+|+.|.+.+++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 244 KSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred cccccccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 1110 00111111222566777789989999999987763
No 435
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.56 E-value=5.5e-15 Score=126.77 Aligned_cols=195 Identities=19% Similarity=0.247 Sum_probs=135.6
Q ss_pred HhccCCCCCccceeeeeecC-----CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 020027 112 TLSLAQHPNIVPILGFSQAP-----GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPN 186 (332)
Q Consensus 112 ~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ 186 (332)
.+-.+.|.|+|+++.++.+. ....+++||+..|++..++++-..+...+....-.+++.||..||.|||+ |.|.
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCc
Confidence 34455699999999988543 45688999999999999998766555556667777899999999999998 5888
Q ss_pred eeecCCCCCCEEeCCCCceEEccCCccccCC----------cccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHH
Q 020027 187 IIHGCIKASNILLNEKFCARVCDYGLSFLAP----------EEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEI 256 (332)
Q Consensus 187 ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el 256 (332)
++|+++..+.|++..++-+|+.--......+ +...+.++|.+||+=.. ...+.++|||+||+...||
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~---tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTT---TNTTGASDIYKFGMCALEM 275 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcc---cccccchhhhhhhHHHHHH
Confidence 9999999999999999988886322111111 11145678888887544 5667899999999999999
Q ss_pred HhCCCC-CCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 020027 257 LSGRRC-EEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVAT 323 (332)
Q Consensus 257 ~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~ 323 (332)
..+..- -.+...-+....+.+- .+....+ .-...+..|++..|..||+|.+++.
T Consensus 276 ailEiq~tnseS~~~~ee~ia~~--------i~~len~-----lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 276 AILEIQSTNSESKVEVEENIANV--------IIGLENG-----LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HHheeccCCCcceeehhhhhhhh--------eeeccCc-----cccCcCcccccCCCCCCcchhhhhc
Confidence 876542 1111100000001000 0000000 2225667899999999999998764
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.53 E-value=3.6e-14 Score=132.17 Aligned_cols=147 Identities=22% Similarity=0.236 Sum_probs=101.2
Q ss_pred CCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCccccc--------------------------------------cc
Q 020027 62 GFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN--------------------------------------AG 103 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--------------------------------------~~ 103 (332)
.|+ .+.||+|++|.||+|++.+|+.||||+.++.....- ..
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 368999999999999999999999999986531100 01
Q ss_pred ccHHHHHHHhccC----CCCCccceeeee-ecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHH-HHH
Q 020027 104 FGFASVIKTLSLA----QHPNIVPILGFS-QAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR-GLE 177 (332)
Q Consensus 104 ~~~~~e~~~l~~l----~h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~-~l~ 177 (332)
.++.+|...+.++ +|.+-+.+-..+ ...+..+++|||++|+++.++......+ .+ ...++..++. .+.
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~---~~---~~~ia~~~~~~~l~ 271 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG---LD---RKALAENLARSFLN 271 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC---CC---HHHHHHHHHHHHHH
Confidence 1345555555444 233334433333 2234568999999999998876532111 22 2345555555 467
Q ss_pred HhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCc
Q 020027 178 YLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPE 218 (332)
Q Consensus 178 ~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~ 218 (332)
.+|.. |++|+|++|.||+++.++.++++|||++...++
T Consensus 272 ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 272 QVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 78887 999999999999999999999999999866543
No 437
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=2.8e-14 Score=131.80 Aligned_cols=240 Identities=20% Similarity=0.224 Sum_probs=174.4
Q ss_pred CCCCCceeec--cCCeEEEEEEe---CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCCcee
Q 020027 62 GFSHRRIIGQ--GRLGTVYAALL---STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGERI 135 (332)
Q Consensus 62 ~~~~~~~lg~--G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 135 (332)
.|.....+|. |.+|.||.++. .++..+|+|.-+...........-.+|.....++ .|+|.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556678999 99999999985 4778899998554433333333346677666777 4999999999999999999
Q ss_pred EEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHH----HHHHhhcCCCCCeeecCCCCCCEEeCCC-CceEEccC
Q 020027 136 IVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAAR----GLEYLHQGVAPNIIHGCIKASNILLNEK-FCARVCDY 210 (332)
Q Consensus 136 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~----~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~df 210 (332)
+-+|+|. .++..+.....+- ++....+....+..+ |+.++|+. .++|-|+||.||++..+ ...+++||
T Consensus 195 iqtE~~~-~sl~~~~~~~~~~---~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCNF---LPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeecccc-chhHHhhhccccc---CCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 9999995 7888887654332 566667777888888 99999998 99999999999999988 88899999
Q ss_pred CccccCCccc-----------CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCC-chhHHHHHHHhhhc
Q 020027 211 GLSFLAPEEK-----------RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEE-GLLVKWALPLIKEM 278 (332)
Q Consensus 211 g~a~~~~~~~-----------~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~-~~~~~~~~~~~~~~ 278 (332)
|+-....+.. .+-..|++||... +-++..+|+||+|.+..|..++...+. +....|.. ...+
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~----~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~--~r~~ 341 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN----GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ--LRQG 341 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhc----cccchHhhhcchhhhhHhhHhhcccccCCCCCCccc--cccc
Confidence 9865443322 4567899999876 467899999999999999999876553 22222221 1110
Q ss_pred ccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 020027 279 RFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVA 322 (332)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~ 322 (332)
.+..........++...+.++++.+|-.|++++.+.
T Consensus 342 --------~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 342 --------YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred --------cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 011111111222455577899999999999987654
No 438
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.45 E-value=2.1e-13 Score=128.80 Aligned_cols=147 Identities=15% Similarity=0.135 Sum_probs=94.6
Q ss_pred cCCCCCCceeeccCCeEEEEEEeCC-CCEEEEEEeccCcccc--------------------------------------
Q 020027 60 TDGFSHRRIIGQGRLGTVYAALLST-GKLVAVKRIHPRLVLS-------------------------------------- 100 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~-------------------------------------- 100 (332)
...|+. +.||+|++|.||+|++.+ |+.||||+.++.....
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 789999999999999766 9999999998653110
Q ss_pred cccccHHHHHHHhccC----CCCCccceeeeeec-CCceeEEEeccCCCCHHHHh--cccCCCCCcCCHHHHHHHHHHHH
Q 020027 101 NAGFGFASVIKTLSLA----QHPNIVPILGFSQA-PGERIIVSEFINMASLDFYL--HENNDGASLLDWNRRLRIATGAA 173 (332)
Q Consensus 101 ~~~~~~~~e~~~l~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l--~~~~~~~~~l~~~~~~~i~~~i~ 173 (332)
....++.+|...+.++ .+.+.+.+-..+.+ .+..+++|||++|+++.++- ...+.....+.......++.|+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 0011344555444443 23444444333322 34568999999999997743 22211111122223333344443
Q ss_pred HHHHHhhcCCCCCeeecCCCCCCEEeCCCC----ceEEccCCccccCC
Q 020027 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKF----CARVCDYGLSFLAP 217 (332)
Q Consensus 174 ~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~----~~kl~dfg~a~~~~ 217 (332)
.. |++|+|++|.||+++.++ .+++.|||+....+
T Consensus 278 -------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 -------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 34 999999999999999887 99999999875544
No 439
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.39 E-value=5.7e-12 Score=117.95 Aligned_cols=160 Identities=19% Similarity=0.227 Sum_probs=119.3
Q ss_pred eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCHHHHhcccCCCCCcCC
Q 020027 82 LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLD 161 (332)
Q Consensus 82 ~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~ 161 (332)
..++.+|.|...+.... .......+-++.++.++||||+++++..+.++..||++|-+. .|..++++..
T Consensus 34 k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~------- 102 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG------- 102 (690)
T ss_pred eccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-------
Confidence 56788888888765543 111124566788999999999999999999999999999984 7888887643
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcccC------CcccccCccccccc
Q 020027 162 WNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKR------GLAGYVDDDYWHEK 235 (332)
Q Consensus 162 ~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~~------~~~~~~~pe~~~~~ 235 (332)
.....--+.||+.||.|||+.| +++|+++.-..|+++..|.-||++|-.......... ....|..|+....
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~- 179 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP- 179 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc-
Confidence 3334456789999999999765 899999999999999999999999977654432211 1122334433221
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhC
Q 020027 236 GGGNATRESDVYGFGVVLLEILSG 259 (332)
Q Consensus 236 ~~~~~~~~~DiwS~G~il~el~tg 259 (332)
-....|.|-|||+++|++.|
T Consensus 180 ----s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 ----SEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ----cccchhhhhHHHHHHHHhCc
Confidence 12356999999999999998
No 440
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.36 E-value=4.4e-12 Score=103.25 Aligned_cols=130 Identities=16% Similarity=0.079 Sum_probs=93.6
Q ss_pred CceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCcc-ceeeeeecCCceeEEEeccCCC
Q 020027 66 RRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV-PILGFSQAPGERIIVSEFINMA 144 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~~ 144 (332)
.+.++.|.++.||++... ++.+++|....... ....+..|...++.+.+.+++ +++.+.. +..+++||++++.
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~ 76 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGS 76 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCC
Confidence 356889999999999864 77899998754421 122457888888887655544 4444432 3457999999998
Q ss_pred CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCC--CCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 145 SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV--APNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 145 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~--~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
++.... .. ....+.+++.+++.||+.. ..+++|+|++|.||+++ ++.++++|||.+.
T Consensus 77 ~l~~~~---------~~---~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 77 ELLTED---------FS---DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccccc---------cc---CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 775420 11 1234678999999999872 12369999999999998 6679999998774
No 441
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35 E-value=1.2e-12 Score=121.10 Aligned_cols=246 Identities=18% Similarity=0.164 Sum_probs=170.9
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEe--CCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeeeecCCce
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALL--STGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFSQAPGER 134 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 134 (332)
....+|.....||.|.|+.|+.... .++..+++|.+.+......+...-..|+.....+ .|.++++++..+......
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3456788899999999999998773 4778999999887665544443445666665555 588999988877777777
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC-CceEEccCCcc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK-FCARVCDYGLS 213 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~dfg~a 213 (332)
++-.|||.++++...+.- ...++....+++..|++.++.++|+. .++|+|++|+||++.++ +..+++|||+.
T Consensus 342 ~ip~e~~~~~s~~l~~~~----~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVT----SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cCchhhhcCcchhhhhHH----HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccc
Confidence 899999999988776632 12367778889999999999999988 99999999999999886 78899999987
Q ss_pred ccCCc--c-cCCccccc-CcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHhhhcccccccCCcCC
Q 020027 214 FLAPE--E-KRGLAGYV-DDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCEEGLLVKWALPLIKEMRFSELLDPRLA 289 (332)
Q Consensus 214 ~~~~~--~-~~~~~~~~-~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (332)
....- . ....-++. ..|..... ..+..+.|++|||.-+.|..++..--... ..+ ..+..+ ...
T Consensus 415 t~~~~~~~~~~~~~r~~p~~~~~~e~--~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-~~~--~~i~~~--------~~p 481 (524)
T KOG0601|consen 415 TRLAFSSGVFHHIDRLYPIAEILLED--YPHLSKADIFSLGLSVDEAITGSPLSESG-VQS--LTIRSG--------DTP 481 (524)
T ss_pred cccceecccccccccccccchhhccc--cccccccccccccccccccccCcccCccc-ccc--eeeecc--------ccc
Confidence 53211 1 11222333 23333332 67788999999999999999876532110 000 111111 111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 020027 290 IPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATIL 325 (332)
Q Consensus 290 ~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~L 325 (332)
.. ......+..+.......|+..||++.++....
T Consensus 482 ~~--~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 482 NL--PGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred CC--CchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 11 11113555667778889999999988776543
No 442
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.31 E-value=2.8e-11 Score=99.89 Aligned_cols=137 Identities=15% Similarity=0.071 Sum_probs=94.4
Q ss_pred ceeeccCCeEEEEEEeCC-------CCEEEEEEeccCccccc---------c-----------ccc----HHHHHHHhcc
Q 020027 67 RIIGQGRLGTVYAALLST-------GKLVAVKRIHPRLVLSN---------A-----------GFG----FASVIKTLSL 115 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~---------~-----------~~~----~~~e~~~l~~ 115 (332)
-.||.|.-+.||.|...+ +..+|+|..+.....-. . ... ..+|...|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999998542 57999999874321100 0 001 2267778877
Q ss_pred CCC--CCccceeeeeecCCceeEEEeccCCCCHH-HHhcccCCCCCcCCHHHHHHHHHHHHHHHHHh-hcCCCCCeeecC
Q 020027 116 AQH--PNIVPILGFSQAPGERIIVSEFINMASLD-FYLHENNDGASLLDWNRRLRIATGAARGLEYL-HQGVAPNIIHGC 191 (332)
Q Consensus 116 l~h--~niv~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~ivH~d 191 (332)
+.. -++...+++ ..-+|+|||+.+..+. ..+++. .++......+..+++.+|..+ |.. +++|+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~-----~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA-----KLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc-----ccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 743 345555544 4568999999764332 122221 134455667789999999998 777 999999
Q ss_pred CCCCCEEeCCCCceEEccCCccccC
Q 020027 192 IKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 192 lk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
|++.||+++ ++.+.++|||.+...
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999997 467999999987554
No 443
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.23 E-value=1.9e-10 Score=97.75 Aligned_cols=143 Identities=22% Similarity=0.298 Sum_probs=105.7
Q ss_pred ceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCC--CCccceeeeeecC---CceeEEEecc
Q 020027 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--PNIVPILGFSQAP---GERIIVSEFI 141 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~---~~~~lv~e~~ 141 (332)
+.|+.|..+.||++...+|+.+++|........ .....+..|...++.+++ .++.+++.+.... +..+++|||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 568999999999999766789999987654321 123357899999998865 3456677776553 3668999999
Q ss_pred CCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCC--------------------------------------
Q 020027 142 NMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV-------------------------------------- 183 (332)
Q Consensus 142 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~-------------------------------------- 183 (332)
++.++...+.. ..++......++.++++++..||+..
T Consensus 83 ~G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 83 DGRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CCEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 99888765431 11566666677778888888877421
Q ss_pred ---------------CCCeeecCCCCCCEEeCC--CCceEEccCCcccc
Q 020027 184 ---------------APNIIHGCIKASNILLNE--KFCARVCDYGLSFL 215 (332)
Q Consensus 184 ---------------~~~ivH~dlk~~Nill~~--~~~~kl~dfg~a~~ 215 (332)
...++|+|+.+.||+++. ++.+.+.||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246899999999999998 56688999987653
No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.16 E-value=4.7e-10 Score=89.89 Aligned_cols=133 Identities=24% Similarity=0.301 Sum_probs=94.8
Q ss_pred ceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccc-------cccHHHHHHHhccCCCCCccceeeeeecCCceeEEEe
Q 020027 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNA-------GFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 139 (332)
..+++|+-+.+|.+.+. |..+.+|.=-+ ...... .....+|..+++++.--.|-.-.-+..+++...|+||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~-K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIP-KRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecC-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 35789999999998763 44455554322 211111 1135678888887754444444445566777889999
Q ss_pred ccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 140 FINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 140 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
|++|..|.+++... ...++..+-.-+.-||.. +|+|+||.++|+++..++ +.++|||++...
T Consensus 80 ~I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 80 YIEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EeCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 99999999888754 123455666677889998 999999999999998776 899999999754
No 445
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.13 E-value=4.4e-11 Score=116.84 Aligned_cols=246 Identities=15% Similarity=0.104 Sum_probs=162.6
Q ss_pred HHhcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCccccc-ccccHHHHHHHhccCCCCCccceeeeeecCCce
Q 020027 57 DAATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSN-AGFGFASVIKTLSLAQHPNIVPILGFSQAPGER 134 (332)
Q Consensus 57 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 134 (332)
....+.+.+.+-+-+|.++.++.+. ..+|...+.|.......... +......+-.+.-..+||-+++..-.+......
T Consensus 800 rsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~ 879 (1205)
T KOG0606|consen 800 RSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPL 879 (1205)
T ss_pred cCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCc
Confidence 3456778888888999999998877 34454445554432221111 111112221111112345555444444445667
Q ss_pred eEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 135 IIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 135 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
.++++|..++++...++.... .+..-.......+.++.+|||+. .+.|+|++|.|.+...++..+++|||...
T Consensus 880 ~L~~~~~~~~~~~Skl~~~~~----~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 880 PLVGHYLNGGDLPSKLHNSGC----LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred chhhHHhccCCchhhhhcCCC----cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccc
Confidence 899999999999888875442 23333344556688899999987 68999999999999999999999998321
Q ss_pred cC------------------------------Cc-------ccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHH
Q 020027 215 LA------------------------------PE-------EKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL 257 (332)
Q Consensus 215 ~~------------------------------~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~ 257 (332)
.. .. ...+|..|.+||.... ......+|.|+.|++++|.+
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg---~~hgs~ad~~~~g~~l~e~l 1029 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG---RRHGSAADWWSSGVCLFEVL 1029 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc---ccCCCcchhhhhhhhhhhhh
Confidence 00 00 0147889999998877 67788999999999999999
Q ss_pred hCCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHH
Q 020027 258 SGRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIV 319 (332)
Q Consensus 258 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~ 319 (332)
+|..||....+..+...+..+...- .. -+.....+..+++...+..+|.+|-.+.
T Consensus 1030 ~g~pp~na~tpq~~f~ni~~~~~~~-----p~--g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1030 TGIPPFNAETPQQIFENILNRDIPW-----PE--GPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cCCCCCCCcchhhhhhccccCCCCC-----CC--CccccChhhhhhhhhhhccCchhccCcc
Confidence 9999999887776665554432111 11 1112233566788888889999996654
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.10 E-value=1.5e-09 Score=86.75 Aligned_cols=146 Identities=19% Similarity=0.174 Sum_probs=102.0
Q ss_pred CCceeeccCCeEEEEEEeCCCCEEEEEEeccCccc------ccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEE
Q 020027 65 HRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVL------SNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 65 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 138 (332)
....+.+|+-+.|+++.. .|+...||.=..+... .-......+|.+.+.++.--.|..-.-++.+...-.|.|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 567899999999999988 5777777753322110 011123567888887765444444444555666678999
Q ss_pred eccCC-CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCC---ceEEccCCccc
Q 020027 139 EFINM-ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKF---CARVCDYGLSF 214 (332)
Q Consensus 139 e~~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~dfg~a~ 214 (332)
||.++ .++.+++....... ........++..|-+.+.-||.+ +++|+||..+||++..++ .+.+.|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~~~~--~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE--SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHccCc--ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 99987 57888887654321 12222357788888999999999 999999999999997654 45799999986
Q ss_pred cC
Q 020027 215 LA 216 (332)
Q Consensus 215 ~~ 216 (332)
..
T Consensus 165 ~s 166 (229)
T KOG3087|consen 165 VS 166 (229)
T ss_pred cc
Confidence 53
No 447
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.99 E-value=5.5e-08 Score=89.17 Aligned_cols=169 Identities=17% Similarity=0.200 Sum_probs=124.9
Q ss_pred CeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeee----cCCceeEEEeccCC-CCHH
Q 020027 74 LGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQ----APGERIIVSEFINM-ASLD 147 (332)
Q Consensus 74 ~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~~~lv~e~~~~-~~L~ 147 (332)
-.+.|++. .-+|..|++|+++........ ....-++.++++.|+|+|++.+++. ++..+++|++|.++ ++|.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n--k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTN--KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcc--cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 35678998 568999999999533222211 2255577899999999999999875 34567899999876 3555
Q ss_pred HHhcccCC-----------CCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 148 FYLHENND-----------GASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 148 ~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
++--.... .....++...+.++.|+..||.++|+. |+.-+-|.+.+|+++.+..++|+..|..-..
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 54322111 122367889999999999999999999 9999999999999999999999888776555
Q ss_pred CcccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCC
Q 020027 217 PEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRR 261 (332)
Q Consensus 217 ~~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~ 261 (332)
.+... +-++ --.+-|.=.||.++.-|.||..
T Consensus 444 ~~d~~--------~~le------~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 444 QEDPT--------EPLE------SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred cCCCC--------cchh------HHhhhhHHHHHHHHHHHhhccc
Confidence 44320 1111 1246799999999999999854
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.95 E-value=5.2e-09 Score=86.04 Aligned_cols=127 Identities=20% Similarity=0.225 Sum_probs=79.5
Q ss_pred EEEEEEeCCCCEEEEEEeccCcccc-----------c-------c------cccHHHHHHHhccCCCC--Cccceeeeee
Q 020027 76 TVYAALLSTGKLVAVKRIHPRLVLS-----------N-------A------GFGFASVIKTLSLAQHP--NIVPILGFSQ 129 (332)
Q Consensus 76 ~V~~~~~~~~~~vavK~~~~~~~~~-----------~-------~------~~~~~~e~~~l~~l~h~--niv~~~~~~~ 129 (332)
.||.|...+|+.+|+|..+.....- . . .....+|...|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899998899999999987432100 0 0 01256788888888654 455555442
Q ss_pred cCCceeEEEeccC--CCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHH-hhcCCCCCeeecCCCCCCEEeCCCCceE
Q 020027 130 APGERIIVSEFIN--MASLDFYLHENNDGASLLDWNRRLRIATGAARGLEY-LHQGVAPNIIHGCIKASNILLNEKFCAR 206 (332)
Q Consensus 130 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~-Lh~~~~~~ivH~dlk~~Nill~~~~~~k 206 (332)
.-.|+|||++ |..+..+.... ++......++.++...+.. +|.. |++|+||++.||+++++ .+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 3479999998 65555443321 1122344567777775555 5677 99999999999999887 899
Q ss_pred EccCCccccC
Q 020027 207 VCDYGLSFLA 216 (332)
Q Consensus 207 l~dfg~a~~~ 216 (332)
++|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999987654
No 449
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.91 E-value=2.8e-08 Score=86.52 Aligned_cols=142 Identities=14% Similarity=0.065 Sum_probs=95.3
Q ss_pred eeeccCCeEEEEEEeCCCCEEEEEEeccCcccc---------cccccHHHHHHHhccCCCCCc--cceeeeeec-----C
Q 020027 68 IIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLS---------NAGFGFASVIKTLSLAQHPNI--VPILGFSQA-----P 131 (332)
Q Consensus 68 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---------~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~-----~ 131 (332)
.+-...-..|++... +|+.+.||......... .....+.+|...+.++...+| ....++... .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 344333445666655 57789999764332110 111136788887777643232 333444432 2
Q ss_pred CceeEEEeccCCC-CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC-------CC
Q 020027 132 GERIIVSEFINMA-SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE-------KF 203 (332)
Q Consensus 132 ~~~~lv~e~~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-------~~ 203 (332)
...+++||++++. +|.+++...... ..+......++.+++..+.-||+. |++|+|++++|||++. +.
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~--~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATN--PPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCc
Confidence 3468999999876 898888543211 135566778899999999999999 9999999999999975 46
Q ss_pred ceEEccCCcccc
Q 020027 204 CARVCDYGLSFL 215 (332)
Q Consensus 204 ~~kl~dfg~a~~ 215 (332)
.+.++||+.+..
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 789999987753
No 450
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.77 E-value=4.2e-08 Score=83.45 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=90.3
Q ss_pred CCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccc--------------c------ccccHHHHHHHhccCCCC--C
Q 020027 63 FSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLS--------------N------AGFGFASVIKTLSLAQHP--N 120 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------~------~~~~~~~e~~~l~~l~h~--n 120 (332)
....+.||.|.-+.||.|..+.|..+|+|.-+.....- . ......+|...|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34557899999999999999999999999765322110 0 011246777778777533 4
Q ss_pred ccceeeeeecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeC
Q 020027 121 IVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLN 200 (332)
Q Consensus 121 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 200 (332)
+.+.+++ +.-.++||+++|..|...--.. -+.. .++..|++-+.-.-.. |+||+|+++-||+++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~~~------en~~---~il~~il~~~~~~~~~---GiVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRLDV------ENPD---EILDKILEEVRKAYRR---GIVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccCcc------cCHH---HHHHHHHHHHHHHHHc---CccccCCchheEEEe
Confidence 5555444 4557999999986665422100 1222 2333444444433344 999999999999999
Q ss_pred CCCceEEccCCcc
Q 020027 201 EKFCARVCDYGLS 213 (332)
Q Consensus 201 ~~~~~kl~dfg~a 213 (332)
++|.+.++||--+
T Consensus 237 ~dg~~~vIDwPQ~ 249 (304)
T COG0478 237 EDGDIVVIDWPQA 249 (304)
T ss_pred cCCCEEEEeCccc
Confidence 9999999999544
No 451
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.70 E-value=3.8e-09 Score=99.66 Aligned_cols=143 Identities=19% Similarity=0.265 Sum_probs=96.8
Q ss_pred HHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCccc---------------CCcccccCcccccc
Q 020027 170 TGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEK---------------RGLAGYVDDDYWHE 234 (332)
Q Consensus 170 ~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~---------------~~~~~~~~pe~~~~ 234 (332)
.+++.|+.|+|.. +++||+++.|++|.++.++..|++.|+.+....... .....|.+||+...
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455899999986 589999999999999999999999998764433211 23457899998876
Q ss_pred cCCCCCCchhhhHHHHHHHHHHHh-CCCCCCchhHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCC
Q 020027 235 KGGGNATRESDVYGFGVVLLEILS-GRRCEEGLLVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRK 313 (332)
Q Consensus 235 ~~~~~~~~~~DiwS~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~ 313 (332)
...+.++|+||+|+++|.+.. |+.-+.......... .....+..-..-.+.+.+.++.+-+.+.+..++.
T Consensus 184 ---~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~------~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~ 254 (700)
T KOG2137|consen 184 ---TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS------FSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSA 254 (700)
T ss_pred ---ccccccccceeeeeEEEEEecCCcchhhccCCcchhh------hhhcccccccccccccCcHHHHHHHHHHhcCCcc
Confidence 677899999999999999985 444333221111100 0001111111111233344677788899999999
Q ss_pred CCCCHHHHHH
Q 020027 314 NRPSIVQVAT 323 (332)
Q Consensus 314 ~RPs~~~i~~ 323 (332)
.||++.++..
T Consensus 255 ~rp~~~~l~~ 264 (700)
T KOG2137|consen 255 VRPTLDLLLS 264 (700)
T ss_pred cCcchhhhhc
Confidence 9998776643
No 452
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.70 E-value=5.8e-08 Score=91.55 Aligned_cols=148 Identities=16% Similarity=0.126 Sum_probs=93.4
Q ss_pred hcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCccccc-------------------------------------
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN------------------------------------- 101 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~------------------------------------- 101 (332)
.-..|+. ..|+.++-|.||+|++++|+.||||+.++.....-
T Consensus 124 ~F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l 202 (517)
T COG0661 124 LFSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRL 202 (517)
T ss_pred HHHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHH
Confidence 3445553 68999999999999999999999999986431100
Q ss_pred -ccccHHHHHHHhccC----CCCCccceeeee-ecCCceeEEEeccCCCCHHHHh--cccCCCCCcCCHHHHHHHHHHHH
Q 020027 102 -AGFGFASVIKTLSLA----QHPNIVPILGFS-QAPGERIIVSEFINMASLDFYL--HENNDGASLLDWNRRLRIATGAA 173 (332)
Q Consensus 102 -~~~~~~~e~~~l~~l----~h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l--~~~~~~~~~l~~~~~~~i~~~i~ 173 (332)
...++.+|...+.++ ++..=+++-..+ +-.+...++|||++|-.+.+.. +..+ .+.........++.
T Consensus 203 ~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g-----~d~k~ia~~~~~~f 277 (517)
T COG0661 203 REELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG-----IDRKELAELLVRAF 277 (517)
T ss_pred HHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC-----CCHHHHHHHHHHHH
Confidence 011234444444333 222223333333 2345668999999998888774 3322 44332222222222
Q ss_pred HHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 174 RGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 174 ~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
--.-+- . |++|.|..|.||+++.++..-+.|||+....+
T Consensus 278 ~~q~~~--d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 278 LRQLLR--D---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred HHHHHh--c---CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 112222 3 89999999999999999999999999875444
No 453
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.69 E-value=2.1e-07 Score=83.57 Aligned_cols=256 Identities=16% Similarity=0.195 Sum_probs=153.3
Q ss_pred CCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccC-CCCCccceeeee------ecCCc-ee
Q 020027 64 SHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLA-QHPNIVPILGFS------QAPGE-RI 135 (332)
Q Consensus 64 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~------~~~~~-~~ 135 (332)
...+.||+|+-+.+|-.-- -+.. +.|+.+....... .+....|... .||-+-.=+.|- -..+. .-
T Consensus 14 ~~gr~LgqGgea~ly~l~e-~~d~-VAKIYh~Pppa~~-----aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iG 86 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE-VRDQ-VAKIYHAPPPAAQ-----AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIG 86 (637)
T ss_pred CCCccccCCccceeeecch-hhch-hheeecCCCchHH-----HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeE
Confidence 3457799999999995431 1223 3466654322111 2233445444 566443312221 11122 34
Q ss_pred EEEeccCCC-CHHHHhccc--CCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEcc---
Q 020027 136 IVSEFINMA-SLDFYLHEN--NDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCD--- 209 (332)
Q Consensus 136 lv~e~~~~~-~L~~~l~~~--~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~d--- 209 (332)
+.|..+++. ....+.+.. ........|...++.+..++.+.+-||.. |.+-+|++++|+|+++++.+.+.|
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccc
Confidence 556655442 333333321 11234578999999999999999999999 999999999999999999999886
Q ss_pred CCcccc--CCcccCCcccccCccccccc--CCCCCCchhhhHHHHHHHHHHHhC-CCCCCchhHH-----HHHHHhhhcc
Q 020027 210 YGLSFL--APEEKRGLAGYVDDDYWHEK--GGGNATRESDVYGFGVVLLEILSG-RRCEEGLLVK-----WALPLIKEMR 279 (332)
Q Consensus 210 fg~a~~--~~~~~~~~~~~~~pe~~~~~--~~~~~~~~~DiwS~G~il~el~tg-~~p~~~~~~~-----~~~~~~~~~~ 279 (332)
|-+..- ...-..|...|.+||.-.-. -+..-+...|-|.+|+++++++.| +.||.|.... .....+-.+.
T Consensus 164 fqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 164 FQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred eeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 333210 00112577889999976532 234557789999999999999985 8999874211 1111233333
Q ss_pred cccccCCc--CC-CC--CChH-HHHHHHHHHHHcccC--CCCCCCCHHHHHHHHhccc
Q 020027 280 FSELLDPR--LA-IP--CEIK-PLVRLAKVALACVGN--SRKNRPSIVQVATILNNLV 329 (332)
Q Consensus 280 ~~~~~~~~--~~-~~--~~~~-~~~~l~~l~~~c~~~--dp~~RPs~~~i~~~L~~~~ 329 (332)
+....+.+ +. .| .+.. -+..+..+..+|+.. ++.-|||++.-+..|..+.
T Consensus 244 f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~ 301 (637)
T COG4248 244 FAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALR 301 (637)
T ss_pred eeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHH
Confidence 32222211 11 11 1111 122456778899865 3678999998888887654
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.59 E-value=6e-07 Score=75.47 Aligned_cols=104 Identities=19% Similarity=0.183 Sum_probs=77.9
Q ss_pred cHHHHHHHhccCCC--CCccceeeeeecC----CceeEEEeccCCC-CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHH
Q 020027 105 GFASVIKTLSLAQH--PNIVPILGFSQAP----GERIIVSEFINMA-SLDFYLHENNDGASLLDWNRRLRIATGAARGLE 177 (332)
Q Consensus 105 ~~~~e~~~l~~l~h--~niv~~~~~~~~~----~~~~lv~e~~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~ 177 (332)
...+|...+..+.. -.+.+.+++.... ...++++|++++. +|.+++..... .+......++.+++..++
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~----~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ----LDPSQRRELLRALARLIA 132 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc----cchhhHHHHHHHHHHHHH
Confidence 45777777666642 2344455555432 2358999999874 79998875322 345567788999999999
Q ss_pred HhhcCCCCCeeecCCCCCCEEeCCCC---ceEEccCCcccc
Q 020027 178 YLHQGVAPNIIHGCIKASNILLNEKF---CARVCDYGLSFL 215 (332)
Q Consensus 178 ~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~dfg~a~~ 215 (332)
-||+. |++|+|+++.|||++.+. .+.++||+-++.
T Consensus 133 ~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 133 KLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999 999999999999999876 788999987654
No 455
>PRK09902 hypothetical protein; Provisional
Probab=98.57 E-value=2e-06 Score=71.42 Aligned_cols=139 Identities=17% Similarity=0.149 Sum_probs=97.4
Q ss_pred eeccCCeEEEEEEeCCCCEEEEEEeccCccc----ccccccHHHHHHHhccCCCC--Cccceeeeee---cC--CceeEE
Q 020027 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVL----SNAGFGFASVIKTLSLAQHP--NIVPILGFSQ---AP--GERIIV 137 (332)
Q Consensus 69 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~---~~--~~~~lv 137 (332)
-|+||-+-|++-..+ |..+-+|.-.+.... ......|.+|...+..+..- .+.+.. ++. .+ -..+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 367888889987764 447888876522111 12233588999988887532 233333 322 11 235799
Q ss_pred EeccCC-CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCc--eEEccCCccc
Q 020027 138 SEFINM-ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFC--ARVCDYGLSF 214 (332)
Q Consensus 138 ~e~~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~--~kl~dfg~a~ 214 (332)
+|-+++ .+|.+++.+.... ..+...+..++.+++..++-||+. |+.|+|+.+.||+++.++. ++++||--++
T Consensus 104 Te~L~g~~~L~~~l~~~~~~--~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVS--PYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCcC--CcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 997653 6888888654322 256677788999999999999999 9999999999999986666 8999996554
No 456
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.46 E-value=8.9e-07 Score=83.45 Aligned_cols=147 Identities=18% Similarity=0.188 Sum_probs=93.5
Q ss_pred CCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccc-----------------------------------ccccc
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLS-----------------------------------NAGFG 105 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------------------------~~~~~ 105 (332)
..|+. +.||.-+.|.||+|++++|+.||||+-++..... ....+
T Consensus 162 ~~f~~-~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELD 240 (538)
T KOG1235|consen 162 SEFDE-EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELD 240 (538)
T ss_pred HhcCc-chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcc
Confidence 34443 6799999999999999999999999988643111 01123
Q ss_pred HHHHHHHhccC----CCCCcc---ceeeee-ecCCceeEEEeccCCCCHHHH--hcccCCCCCcCCHHHHHHHHHHHHHH
Q 020027 106 FASVIKTLSLA----QHPNIV---PILGFS-QAPGERIIVSEFINMASLDFY--LHENNDGASLLDWNRRLRIATGAARG 175 (332)
Q Consensus 106 ~~~e~~~l~~l----~h~niv---~~~~~~-~~~~~~~lv~e~~~~~~L~~~--l~~~~~~~~~l~~~~~~~i~~~i~~~ 175 (332)
|.+|.+...+. .|-+.. .+-.++ .-.....|+||||+|..+.+. +.+.+ ++...+..-+.+...-
T Consensus 241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~g-----i~~~~i~~~l~~~~~~ 315 (538)
T KOG1235|consen 241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRG-----ISPHDILNKLVEAYLE 315 (538)
T ss_pred hHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcC-----CCHHHHHHHHHHHHHH
Confidence 45554443332 344411 122222 223457899999999866544 44333 4554444444443333
Q ss_pred HHHhhcCCCCCeeecCCCCCCEEeCC----CCceEEccCCccccCCc
Q 020027 176 LEYLHQGVAPNIIHGCIKASNILLNE----KFCARVCDYGLSFLAPE 218 (332)
Q Consensus 176 l~~Lh~~~~~~ivH~dlk~~Nill~~----~~~~kl~dfg~a~~~~~ 218 (332)
+-+-| |++|+|-.|.||++.. ++.+.+-|||+.....+
T Consensus 316 qIf~~-----GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 316 QIFKT-----GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHHhc-----CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 33333 8999999999999984 66788999998765543
No 457
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.40 E-value=1.8e-06 Score=72.03 Aligned_cols=141 Identities=13% Similarity=0.171 Sum_probs=90.8
Q ss_pred HhcCCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccc-------cHHHHHHHhccCCCCCc---cceeee
Q 020027 58 AATDGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF-------GFASVIKTLSLAQHPNI---VPILGF 127 (332)
Q Consensus 58 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~-------~~~~e~~~l~~l~h~ni---v~~~~~ 127 (332)
....+|...+.+-......|.+-.. +|+.+.+|..++........+ ...+++..+..++...+ ..++-.
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 3456788888888877777776666 568899998876542211111 12333444444432222 222222
Q ss_pred eec-----CCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCC
Q 020027 128 SQA-----PGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEK 202 (332)
Q Consensus 128 ~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 202 (332)
.+. ....+++|||++|..|.++.. ++. .+...+.+++.-+|+. |++|+|..|+|++++++
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~ 171 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN 171 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC
Confidence 221 134568999999988766432 222 2445677889999999 99999999999999865
Q ss_pred CceEEccCCcccc
Q 020027 203 FCARVCDYGLSFL 215 (332)
Q Consensus 203 ~~~kl~dfg~a~~ 215 (332)
+ +++.||+..+.
T Consensus 172 ~-i~iID~~~k~~ 183 (229)
T PF06176_consen 172 G-IRIIDTQGKRM 183 (229)
T ss_pred c-EEEEECccccc
Confidence 5 99999976654
No 458
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.33 E-value=4.7e-06 Score=70.38 Aligned_cols=152 Identities=17% Similarity=0.149 Sum_probs=92.2
Q ss_pred HHHHHhcCCCCCCc---eeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccc--------------c--------HHH
Q 020027 54 TEIDAATDGFSHRR---IIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGF--------------G--------FAS 108 (332)
Q Consensus 54 ~~~~~~~~~~~~~~---~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~--------------~--------~~~ 108 (332)
..+....+...+.. .|++|.-+.||+|...++..+|+|+.+.....-.... . ...
T Consensus 38 ~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~k 117 (268)
T COG1718 38 ETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARK 117 (268)
T ss_pred HHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHH
Confidence 34444444444443 4667778899999988899999999975432211100 0 223
Q ss_pred HHHHhccCC--CCCccceeeeeecCCceeEEEeccCCCC-HHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 020027 109 VIKTLSLAQ--HPNIVPILGFSQAPGERIIVSEFINMAS-LDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAP 185 (332)
Q Consensus 109 e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~~~-L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~ 185 (332)
|...|.++. +-.+.+-+++. .-.|+|||+.... -.-.++.. .++......+..++.+++.-|-.. .
T Consensus 118 Ef~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv-----~~e~~e~~~~~~~~v~~~~~l~~~--a 186 (268)
T COG1718 118 EFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKDV-----PLELEEAEGLYEDVVEYMRRLYKE--A 186 (268)
T ss_pred HHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcccC-----CcCchhHHHHHHHHHHHHHHHHHh--c
Confidence 344444332 22222222221 2369999985431 11111111 123335667778888888887762 2
Q ss_pred CeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 186 NIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 186 ~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
++||+||+.=|||+. ++.+.++|||-|....
T Consensus 187 ~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 187 GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 999999999999999 8899999999876543
No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.33 E-value=1e-05 Score=68.99 Aligned_cols=141 Identities=12% Similarity=0.082 Sum_probs=82.1
Q ss_pred CceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCC--ccceeeeeecCCceeEEEeccCC
Q 020027 66 RRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN--IVPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~ 143 (332)
-..||+|.-+.||+. .|..+++|...... ......+|.+.++.+..-. +.+.+++....+...++||+++|
T Consensus 6 ~~~i~~G~t~~~y~~---~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 6 WTQTGEGGNGESYTH---KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred heeecCCCCcceeEe---cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 357899999999984 25567788775432 1223578888888775333 45667777777778899999988
Q ss_pred CC-HHHHhc--------------c-----cCCCCCcCCHHHHH-HHHHH----------HHH-HHHHhhcC-CCCCeeec
Q 020027 144 AS-LDFYLH--------------E-----NNDGASLLDWNRRL-RIATG----------AAR-GLEYLHQG-VAPNIIHG 190 (332)
Q Consensus 144 ~~-L~~~l~--------------~-----~~~~~~~l~~~~~~-~i~~~----------i~~-~l~~Lh~~-~~~~ivH~ 190 (332)
.+ +...+. + +.......+..... .+..+ +.. ...+|... ..+.++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~Hg 158 (226)
T TIGR02172 79 KRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHG 158 (226)
T ss_pred ccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEec
Confidence 63 211111 0 00000001111000 00000 001 11222211 13367899
Q ss_pred CCCCCCEEeCCCCceEEccCCccc
Q 020027 191 CIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 191 dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
|+.|.|+++++++ +.+.||+.+.
T Consensus 159 D~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 159 DFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCCCcEEEcCCC-cEEEechhcC
Confidence 9999999999888 9999998764
No 460
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.16 E-value=5.7e-05 Score=62.73 Aligned_cols=136 Identities=18% Similarity=0.174 Sum_probs=90.3
Q ss_pred CCCceeeccCCeEEEEEEeCCCCEEEEEEeccCc--------------ccccccccHHHHHHHhccCC------CCCccc
Q 020027 64 SHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRL--------------VLSNAGFGFASVIKTLSLAQ------HPNIVP 123 (332)
Q Consensus 64 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~e~~~l~~l~------h~niv~ 123 (332)
+....||+|+.-.||. +++.....||+.++.. ..........+|+.....+. +.+|.+
T Consensus 4 ~~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r 81 (199)
T PF10707_consen 4 SESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR 81 (199)
T ss_pred CCCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence 3456899999999996 4555667889988765 01111234566665544443 889999
Q ss_pred eeeeeecCCceeEEEeccCC------CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCE
Q 020027 124 ILGFSQAPGERIIVSEFINM------ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNI 197 (332)
Q Consensus 124 ~~~~~~~~~~~~lv~e~~~~------~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Ni 197 (332)
++|+.+++--.-+++|.+.. .+|.+++.... ++. .....+. +=..||-++ .|+.+|++|.||
T Consensus 82 ~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~-----~~~-~~~~~L~---~f~~~l~~~---~Iv~~dl~~~NI 149 (199)
T PF10707_consen 82 FYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG-----LTE-ELRQALD---EFKRYLLDH---HIVIRDLNPHNI 149 (199)
T ss_pred EeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC-----ccH-HHHHHHH---HHHHHHHHc---CCeecCCCcccE
Confidence 99999988777888887632 36788885432 444 2333333 334566666 899999999999
Q ss_pred EeCCC--C--ceEEcc-CCcc
Q 020027 198 LLNEK--F--CARVCD-YGLS 213 (332)
Q Consensus 198 ll~~~--~--~~kl~d-fg~a 213 (332)
++... + .+.+.| ||..
T Consensus 150 v~~~~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 150 VVQRRDSGEFRLVLIDGLGEK 170 (199)
T ss_pred EEEecCCCceEEEEEeCCCCc
Confidence 99632 2 466777 4433
No 461
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.07 E-value=4.4e-07 Score=85.34 Aligned_cols=183 Identities=15% Similarity=0.064 Sum_probs=124.6
Q ss_pred hcCCCCCCceeeccCCeEEEEEE-eCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCC-ccceeeeeecCCceeE
Q 020027 59 ATDGFSHRRIIGQGRLGTVYAAL-LSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPN-IVPILGFSQAPGERII 136 (332)
Q Consensus 59 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~l 136 (332)
.+..+....-+++|++++++|.+ ..+...+ .+.+... ....-++++|.+++||| .+..++-+..++..++
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i 311 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWI 311 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccch
Confidence 34444445668999999999987 3333333 5555422 23466788999999999 8888888888899999
Q ss_pred EEeccCCC-CHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 137 VSEFINMA-SLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 137 v~e~~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
.++++..+ +...-.... ...+...+...+...-+++++++|+. .=+|+| ||+..+ +..|..||+.+..
T Consensus 312 ~~~i~s~~rs~~~~~~~s---e~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~ 380 (829)
T KOG0576|consen 312 PMRICSTGRSSALEMTVS---EIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQ 380 (829)
T ss_pred hhhhhcCCccccccCChh---hHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcc
Confidence 99999766 221111100 00022223334455566789999975 458998 777755 6789999998765
Q ss_pred CCcc-----cCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCC
Q 020027 216 APEE-----KRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCE 263 (332)
Q Consensus 216 ~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~ 263 (332)
+... ..+++.+++||.... ..+....|.||.|.--.++.-|-+|-
T Consensus 381 L~~~~~~~t~~~~~~~~~pev~~~---~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 381 LTRTMKPRTAIGTPEPLAPEVIQE---NTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred cCcccccccCCCCCCCCCchhhcc---cccccCCCccCCCcchhhcCCCCCCC
Confidence 5433 357888999997765 67788899999998766766665543
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.07 E-value=8.5e-05 Score=64.11 Aligned_cols=76 Identities=9% Similarity=0.099 Sum_probs=51.5
Q ss_pred eeeccCC-eEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCC-CCCccceeeeeecCCceeEEEeccCCCC
Q 020027 68 IIGQGRL-GTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNIVPILGFSQAPGERIIVSEFINMAS 145 (332)
Q Consensus 68 ~lg~G~~-g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~ 145 (332)
.|..|.. +.||+.... +..+.+|...... .....+|+..++.+. +--+.+++++....+..+++||+++|.+
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 78 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVP 78 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCcc
Confidence 3445555 788988764 4678888765332 224577888887773 3445567777766667899999999887
Q ss_pred HHHH
Q 020027 146 LDFY 149 (332)
Q Consensus 146 L~~~ 149 (332)
+...
T Consensus 79 l~~~ 82 (244)
T cd05150 79 AAAL 82 (244)
T ss_pred HhHh
Confidence 7643
No 463
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.97 E-value=4.5e-05 Score=61.16 Aligned_cols=127 Identities=20% Similarity=0.248 Sum_probs=83.7
Q ss_pred CCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccc-eeeeeecCCceeEEEeccCC
Q 020027 65 HRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVP-ILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 65 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~~~~ 143 (332)
..+.|++|++|.||.|.+. |..+|+|+-+.+ .....+..|.+++..++-.++.+ ++.+ +.-++.|||+.|
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~d----s~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G 96 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRD----SPRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDG 96 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCC----cchhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcC
Confidence 3468999999999999984 458899986543 23335688888888877655543 3333 223456999998
Q ss_pred CCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCC--CCEEeCCCCceEEccCCcccc
Q 020027 144 ASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKA--SNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 144 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~--~Nill~~~~~~kl~dfg~a~~ 215 (332)
..|..+-... +-.+.. .+++.---|-.. ||-|..++- .||++.+ +.+.|+||--|++
T Consensus 97 ~~L~~~~~~~-------~rk~l~----~vlE~a~~LD~~---GI~H~El~~~~k~vlv~~-~~~~iIDFd~At~ 155 (201)
T COG2112 97 RPLGKLEIGG-------DRKHLL----RVLEKAYKLDRL---GIEHGELSRPWKNVLVND-RDVYIIDFDSATF 155 (201)
T ss_pred cchhhhhhcc-------cHHHHH----HHHHHHHHHHHh---ccchhhhcCCceeEEecC-CcEEEEEccchhh
Confidence 8887655321 223333 344443334344 899998875 3555544 4899999987764
No 464
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.96 E-value=4.6e-05 Score=64.87 Aligned_cols=78 Identities=19% Similarity=0.183 Sum_probs=53.2
Q ss_pred CceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCC--Cccceeeeee---cCCceeEEEec
Q 020027 66 RRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP--NIVPILGFSQ---APGERIIVSEF 140 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~---~~~~~~lv~e~ 140 (332)
.+.++.|..+.||+....+ ..+++|..... .......+|..+++.+... .+.+++.... .....+++|++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~ 76 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEY 76 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEE
Confidence 3578999999999999876 59999986543 1222456777777776433 2445555432 23456899999
Q ss_pred cCCCCHHH
Q 020027 141 INMASLDF 148 (332)
Q Consensus 141 ~~~~~L~~ 148 (332)
+++..+..
T Consensus 77 i~g~~~~~ 84 (239)
T PF01636_consen 77 IPGRPLDD 84 (239)
T ss_dssp ESSEEHHH
T ss_pred eccccccc
Confidence 99987777
No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=97.94 E-value=0.00014 Score=73.69 Aligned_cols=79 Identities=13% Similarity=0.268 Sum_probs=55.6
Q ss_pred CceeeccCCeEEEEEEeCCC---CEEEEEEeccCcccccccccHHHHHHHhccCC-CCCc--cceeeeeecC---CceeE
Q 020027 66 RRIIGQGRLGTVYAALLSTG---KLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ-HPNI--VPILGFSQAP---GERII 136 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni--v~~~~~~~~~---~~~~l 136 (332)
.+.++.|.++.+|+....++ ..+++|+....... .....+.+|..+++.+. |+++ .+++.+|.+. +..++
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~-~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL-QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC-ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 56789999999999876543 36777765433211 12235789999999885 6664 6777777654 46789
Q ss_pred EEeccCCCC
Q 020027 137 VSEFINMAS 145 (332)
Q Consensus 137 v~e~~~~~~ 145 (332)
+||+++|..
T Consensus 122 VME~v~G~~ 130 (822)
T PLN02876 122 IMEYLEGRI 130 (822)
T ss_pred EEEecCCcc
Confidence 999998764
No 466
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.93 E-value=4.6e-05 Score=62.90 Aligned_cols=100 Identities=23% Similarity=0.197 Sum_probs=77.3
Q ss_pred HHHHHHhccCCC-CCccceeeeeecCCceeEEEeccCCCCHHHH---hcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcC
Q 020027 107 ASVIKTLSLAQH-PNIVPILGFSQAPGERIIVSEFINMASLDFY---LHENNDGASLLDWNRRLRIATGAARGLEYLHQG 182 (332)
Q Consensus 107 ~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~---l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~ 182 (332)
..|.-++..+++ +++.+++|+|- .+++.||...+++... +.+. ...+|..+.+|+.++++.+.++++.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~----~~~~w~~R~~iA~~lL~~l~~l~~~ 78 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQF----LQSPWEQRAKIALQLLELLEELDHG 78 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccc----cccCHHHHHHHHHHHHHHHHHHhcC
Confidence 346667777765 69999999993 2578999976655321 1111 1158999999999999999999986
Q ss_pred CCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 183 VAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 183 ~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
....+.-.|++++|+-+++++.+|+.|.....
T Consensus 79 ~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~ 110 (188)
T PF12260_consen 79 PLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVF 110 (188)
T ss_pred CCCcEEEeecchHHeEEeCCCcEEEEechhcc
Confidence 44468889999999999999999999987553
No 467
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.89 E-value=0.00026 Score=58.51 Aligned_cols=128 Identities=20% Similarity=0.258 Sum_probs=87.6
Q ss_pred cCCCCCCceeeccCC-eEEEEEEeCCCCEEEEEEecc---Cc--------ccc--------cccccHHHHHHHhccCC--
Q 020027 60 TDGFSHRRIIGQGRL-GTVYAALLSTGKLVAVKRIHP---RL--------VLS--------NAGFGFASVIKTLSLAQ-- 117 (332)
Q Consensus 60 ~~~~~~~~~lg~G~~-g~V~~~~~~~~~~vavK~~~~---~~--------~~~--------~~~~~~~~e~~~l~~l~-- 117 (332)
+.+++..+.||.|.- |.||+++. +|+.+|+|..+. .. ... .....|..|.+...+++
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 378888999999999 99999998 577999999321 10 000 01124788888877774
Q ss_pred -CCCc--cceeeeeecC------------------CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHH
Q 020027 118 -HPNI--VPILGFSQAP------------------GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGL 176 (332)
Q Consensus 118 -h~ni--v~~~~~~~~~------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l 176 (332)
+.++ |+.+||..-. ....||.||.+... .+... -+.+|.+-+
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------~~~~~----~~~~~~~dl 177 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------PLQIR----DIPQMLRDL 177 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------ccchh----HHHHHHHHH
Confidence 4566 8889986322 12246666665432 02222 245677778
Q ss_pred HHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCcc
Q 020027 177 EYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLS 213 (332)
Q Consensus 177 ~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a 213 (332)
..+|.. ||+-+|+++.|.. .-||+|||.+
T Consensus 178 ~~~~k~---gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 178 KILHKL---GIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHHC---CeeeccCcccccc-----CCEEEecccC
Confidence 889988 9999999999985 3589999854
No 468
>PRK10593 hypothetical protein; Provisional
Probab=97.65 E-value=0.0012 Score=58.81 Aligned_cols=79 Identities=15% Similarity=0.114 Sum_probs=54.7
Q ss_pred CCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCC---CCccceeeeeec---CCceeE
Q 020027 63 FSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH---PNIVPILGFSQA---PGERII 136 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~---~~~~~l 136 (332)
....+.||.|..+.||+....++ .+.+|..+.. .....+..|...++.+.- -.+.++++++.. .+..++
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~L 90 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQG-NPMPLMARSF----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVL 90 (297)
T ss_pred hheeeecCCccceeEEEEEcCCC-CEEEEEeccc----ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEE
Confidence 34456899999999999876555 4666764321 112246888888887742 356777877643 467899
Q ss_pred EEeccCCCCH
Q 020027 137 VSEFINMASL 146 (332)
Q Consensus 137 v~e~~~~~~L 146 (332)
+||++++.++
T Consensus 91 VmE~i~G~~~ 100 (297)
T PRK10593 91 LLERLRGVSV 100 (297)
T ss_pred EEeccCCEec
Confidence 9999988654
No 469
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.64 E-value=0.00025 Score=71.60 Aligned_cols=190 Identities=18% Similarity=0.228 Sum_probs=121.8
Q ss_pred HHHHHHhccCCCCCccceeeeeecCCc----eeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcC
Q 020027 107 ASVIKTLSLAQHPNIVPILGFSQAPGE----RIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQG 182 (332)
Q Consensus 107 ~~e~~~l~~l~h~niv~~~~~~~~~~~----~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~ 182 (332)
.-|...+.+..|+|++.++.+....-. ..+..|++...++...+..... ++..+.+.+..+..+|++|+|+.
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~----i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGS----IPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccc----cCHHHHHHHHHHHhhhHHHHHHh
Confidence 344556778899999999998754422 2344577777777666654332 67788888899999999999997
Q ss_pred CCCCeeecCCCCC---CEEeCCCCceEEc--cCCccccCCcccC-----CcccccCcccccccCCCCCCchhhhHHHHHH
Q 020027 183 VAPNIIHGCIKAS---NILLNEKFCARVC--DYGLSFLAPEEKR-----GLAGYVDDDYWHEKGGGNATRESDVYGFGVV 252 (332)
Q Consensus 183 ~~~~ivH~dlk~~---Nill~~~~~~kl~--dfg~a~~~~~~~~-----~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~i 252 (332)
...|.-+..+ +.-.+..+.+.++ ||+.+...++... ....+.++|...... ...+...|+|.+|..
T Consensus 306 ---~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~-~~~~r~~dL~~lgll 381 (1351)
T KOG1035|consen 306 ---SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENT-AKKSRLTDLWCLGLL 381 (1351)
T ss_pred ---ccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCcccccccccccccc-chhhhhhHHHHHHHH
Confidence 5666655555 4444556667766 8887766554332 233455555544321 223344699999999
Q ss_pred HHHHHhCCCCCCch-hHHHHHHHhhhcccccccCCcCCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 020027 253 LLEILSGRRCEEGL-LVKWALPLIKEMRFSELLDPRLAIPCEIKPLVRLAKVALACVGNSRKNRPSIVQVATI 324 (332)
Q Consensus 253 l~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i~~~ 324 (332)
+..+..|..+..-. .... .++ .... ....+...+|...++++|+++.+++..
T Consensus 382 ~~~~~~~~~i~~~~~~~~~------------~l~----~~~~----~~~~d~~~~~~~~~~~~Rl~~~~ll~~ 434 (1351)
T KOG1035|consen 382 LLQLSQGEDISEKSAVPVS------------LLD----VLST----SELLDALPKCLDEDSEERLSALELLTH 434 (1351)
T ss_pred HhhhhhcCcccccccchhh------------hhc----cccc----hhhhhhhhhhcchhhhhccchhhhhhc
Confidence 99988876543211 0000 000 0000 034566778999999999999988764
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.58 E-value=0.0015 Score=55.93 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=46.9
Q ss_pred ceeeccCCeEEEEEEeCC--CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCc-cceeeeeecCCceeEEEeccCC
Q 020027 67 RIIGQGRLGTVYAALLST--GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI-VPILGFSQAPGERIIVSEFINM 143 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~ 143 (332)
+.|..|-.+.+|+....+ ++.+++|...... ....+..+|...++.+...++ .++++... -.++|||++|
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~---~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G 76 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT---ELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPG 76 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCc---cceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCC
Confidence 467778888999988654 6788999765331 112234678888887743333 34444332 2479999988
Q ss_pred CCH
Q 020027 144 ASL 146 (332)
Q Consensus 144 ~~L 146 (332)
.++
T Consensus 77 ~~l 79 (235)
T cd05157 77 RTL 79 (235)
T ss_pred CcC
Confidence 765
No 471
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.52 E-value=0.00078 Score=57.77 Aligned_cols=31 Identities=26% Similarity=0.408 Sum_probs=25.7
Q ss_pred CCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 184 APNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 184 ~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
.+.++|+|+.+.|++++++...-+.||+.+.
T Consensus 163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred CceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 3469999999999999877656799998763
No 472
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.47 E-value=0.0019 Score=59.58 Aligned_cols=77 Identities=19% Similarity=0.172 Sum_probs=50.3
Q ss_pred CceeeccCCeEEEEEEeCCC-CEEEEEEeccCccc--c---cccccHHHHHHHhccCC---CCCccceeeeeecCCceeE
Q 020027 66 RRIIGQGRLGTVYAALLSTG-KLVAVKRIHPRLVL--S---NAGFGFASVIKTLSLAQ---HPNIVPILGFSQAPGERII 136 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~--~---~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~l 136 (332)
.+.||.|.++.||++...+| +.++||.-.+.... . ........|...|..+. ..++.+++.+ +++..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 36799999999999998776 48999986432111 0 11123456666666542 3456666666 3355789
Q ss_pred EEeccCCC
Q 020027 137 VSEFINMA 144 (332)
Q Consensus 137 v~e~~~~~ 144 (332)
+||++++.
T Consensus 109 VME~L~~~ 116 (401)
T PRK09550 109 VMEDLSDH 116 (401)
T ss_pred EEecCCCc
Confidence 99998763
No 473
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.45 E-value=0.0015 Score=56.73 Aligned_cols=138 Identities=11% Similarity=0.078 Sum_probs=74.6
Q ss_pred eeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCcc-ceeeeeecCCceeEEEeccCCCCHH
Q 020027 69 IGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV-PILGFSQAPGERIIVSEFINMASLD 147 (332)
Q Consensus 69 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~~~L~ 147 (332)
+..|-.+.+|+... +++.+++|......... ..+..+|...++.+....++ +++... + .++++||++|..+.
T Consensus 4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~~~ 76 (256)
T TIGR02721 4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKAL--GVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEVIT 76 (256)
T ss_pred CCCcCcCCeEEEEe-CCccEEEeeCCcccccc--cCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCcccc
Confidence 45677788998874 56678888754322111 12457888888877543332 233332 1 36899999886653
Q ss_pred HH--------------h---cccCCCCCcCCHH-HHHHHHHHH---------HHHHHHhhcC-----CCCCeeecCCCCC
Q 020027 148 FY--------------L---HENNDGASLLDWN-RRLRIATGA---------ARGLEYLHQG-----VAPNIIHGCIKAS 195 (332)
Q Consensus 148 ~~--------------l---~~~~~~~~~l~~~-~~~~i~~~i---------~~~l~~Lh~~-----~~~~ivH~dlk~~ 195 (332)
.- + ++.......++.. .......++ ..-+..+-.. ....++|+|+.|.
T Consensus 77 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~ 156 (256)
T TIGR02721 77 LDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY 156 (256)
T ss_pred cccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence 21 1 1111001111211 111111111 1111111111 1336899999999
Q ss_pred CEEeCCCCceEEccCCccc
Q 020027 196 NILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 196 Nill~~~~~~kl~dfg~a~ 214 (332)
||++++++ +.+.||..+.
T Consensus 157 Nil~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 157 NLVVTPQG-LKLIDWEYAS 174 (256)
T ss_pred cEEEeCCC-CEEEeccccC
Confidence 99999877 7899997664
No 474
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.23 E-value=0.0025 Score=57.27 Aligned_cols=138 Identities=17% Similarity=0.192 Sum_probs=88.0
Q ss_pred ceeeccCCeEEEEEEeCCCCEEEEEEeccCccccc-------cccc-----------------HHHHHHHhccCCCCCcc
Q 020027 67 RIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSN-------AGFG-----------------FASVIKTLSLAQHPNIV 122 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-------~~~~-----------------~~~e~~~l~~l~h~niv 122 (332)
-.|..|.-+.||.+...+|..+|||+.+.....-. ..+. ...|+..|.+++...|.
T Consensus 150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP 229 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIP 229 (520)
T ss_pred cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 46888999999999988999999999875332111 0111 23445555555433322
Q ss_pred ceeeeeecCCceeEEEeccCCCCH-HHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCC
Q 020027 123 PILGFSQAPGERIIVSEFINMASL-DFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNE 201 (332)
Q Consensus 123 ~~~~~~~~~~~~~lv~e~~~~~~L-~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~ 201 (332)
.--..... .-.|||+|+..... .-.++. ..++...+..+-.|++.-|.-|...| ++||.||+--|+|..
T Consensus 230 ~PePIlLk--~hVLVM~FlGrdgw~aPkLKd-----~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyh- 299 (520)
T KOG2270|consen 230 CPEPILLK--NHVLVMEFLGRDGWAAPKLKD-----ASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYH- 299 (520)
T ss_pred CCCceeee--cceEeeeeccCCCCcCccccc-----ccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEE-
Confidence 11111111 12689999842111 111211 12566677777888999999888877 899999999999984
Q ss_pred CCceEEccCCccc
Q 020027 202 KFCARVCDYGLSF 214 (332)
Q Consensus 202 ~~~~kl~dfg~a~ 214 (332)
+|.+.++|-+-+.
T Consensus 300 dG~lyiIDVSQSV 312 (520)
T KOG2270|consen 300 DGKLYIIDVSQSV 312 (520)
T ss_pred CCEEEEEEccccc
Confidence 5678999987663
No 475
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.02 E-value=0.0092 Score=53.17 Aligned_cols=74 Identities=16% Similarity=0.157 Sum_probs=45.6
Q ss_pred ceeeccCCeEEEEEEeCC-------CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCc-cceeeeeecCCceeEEE
Q 020027 67 RIIGQGRLGTVYAALLST-------GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNI-VPILGFSQAPGERIIVS 138 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 138 (332)
+.+..|--..+|+....+ ++.+++|....... ...+..+|..++..+...++ .++++++. + .+++
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~---~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v~ 76 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE---LLIDRERELVVFARLSERNLGPKLYGIFP-N---GRIE 76 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc---ceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cchh
Confidence 456666677889888654 57899998654321 12245778777777643333 34455443 2 3578
Q ss_pred eccCCCCHH
Q 020027 139 EFINMASLD 147 (332)
Q Consensus 139 e~~~~~~L~ 147 (332)
||++|..+.
T Consensus 77 e~i~G~~l~ 85 (302)
T cd05156 77 EFIPSRTLT 85 (302)
T ss_pred heeCCCcCC
Confidence 998887654
No 476
>PRK05231 homoserine kinase; Provisional
Probab=96.98 E-value=0.018 Score=51.80 Aligned_cols=32 Identities=16% Similarity=0.287 Sum_probs=26.8
Q ss_pred CCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 183 VAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 183 ~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
...+++|+|+.|.||+++++...-+.||+.+.
T Consensus 185 lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 185 LPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred CCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 35589999999999999876656899998764
No 477
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.96 E-value=0.016 Score=51.75 Aligned_cols=144 Identities=15% Similarity=0.203 Sum_probs=78.5
Q ss_pred CceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCC--Cccceeeee------ecCCceeEE
Q 020027 66 RRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP--NIVPILGFS------QAPGERIIV 137 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~------~~~~~~~lv 137 (332)
.+.++.|.-..+|+....+| .+++|..+.... ......|...+..+... .+.+++... ...+..+++
T Consensus 27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~~----~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l 101 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKRVK----AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACL 101 (307)
T ss_pred ccccCCccccceEEEEeCCC-cEEEEEecCCCC----HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEE
Confidence 56677777789998876555 577887654211 11234555555555321 233433321 224567899
Q ss_pred EeccCCCCHHH-----------Hh---cccCCC----C----CcCCHHHHH------------HHHHHHHHHHHHhhc--
Q 020027 138 SEFINMASLDF-----------YL---HENNDG----A----SLLDWNRRL------------RIATGAARGLEYLHQ-- 181 (332)
Q Consensus 138 ~e~~~~~~L~~-----------~l---~~~~~~----~----~~l~~~~~~------------~i~~~i~~~l~~Lh~-- 181 (332)
+||++|..+.. .+ +..... . ..-.|.... .....+...+.++..
T Consensus 102 ~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~ 181 (307)
T TIGR00938 102 VEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFW 181 (307)
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhh
Confidence 99998854321 11 110000 0 001111100 001122334544432
Q ss_pred --CCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 182 --GVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 182 --~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
....+++|+|+.+.|+++++++.+.+.||+.+.
T Consensus 182 ~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 182 PRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred hhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 234689999999999999988777899998663
No 478
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.95 E-value=0.012 Score=52.21 Aligned_cols=144 Identities=17% Similarity=0.134 Sum_probs=80.9
Q ss_pred CCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCC--Cccceeee------eecCCceeE
Q 020027 65 HRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHP--NIVPILGF------SQAPGERII 136 (332)
Q Consensus 65 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~------~~~~~~~~l 136 (332)
..+.+..|....+|+....+ ..+++|..... . ......|+..+..+.+. .+.+.+.. ....+..+.
T Consensus 18 ~i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~~---~--~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~ 91 (296)
T cd05153 18 SFEGISAGIENTNYFVTTDS-GRYVLTLFEKV---S--AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAA 91 (296)
T ss_pred heecccCccccceEEEEeCC-CcEEEEEcCCC---C--hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEE
Confidence 35677788888999887644 47888886531 1 12345666666666432 23343331 123456689
Q ss_pred EEeccCCCCHHH----Hh----------cccCCC--C-----CcCCHHHHH----------HHHHHHHHHHHHhhc----
Q 020027 137 VSEFINMASLDF----YL----------HENNDG--A-----SLLDWNRRL----------RIATGAARGLEYLHQ---- 181 (332)
Q Consensus 137 v~e~~~~~~L~~----~l----------~~~~~~--~-----~~l~~~~~~----------~i~~~i~~~l~~Lh~---- 181 (332)
++++++|..+.. .. +..... . ....|.... .....+..++.++..
T Consensus 92 l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 171 (296)
T cd05153 92 LVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPS 171 (296)
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhh
Confidence 999998876532 00 000000 0 011221110 011122333444442
Q ss_pred CCCCCeeecCCCCCCEEeCCCCceEEccCCccc
Q 020027 182 GVAPNIIHGCIKASNILLNEKFCARVCDYGLSF 214 (332)
Q Consensus 182 ~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~ 214 (332)
....+++|+|+.|.|+++++++.+.|.||+.+.
T Consensus 172 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 172 DLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred cCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 223479999999999999988777899997664
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.78 E-value=0.0019 Score=56.97 Aligned_cols=134 Identities=16% Similarity=0.106 Sum_probs=86.7
Q ss_pred CCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccc--------------c------ccccHHHHHHHhccCC-C-C
Q 020027 62 GFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLS--------------N------AGFGFASVIKTLSLAQ-H-P 119 (332)
Q Consensus 62 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------~------~~~~~~~e~~~l~~l~-h-~ 119 (332)
-++..++||-|.-+.||.+-.+.|++.++|.-+.....- . ......+|...|+.+. | -
T Consensus 93 v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 456778999999999999999999999998655321100 0 0112345666666553 2 1
Q ss_pred CccceeeeeecCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEe
Q 020027 120 NIVPILGFSQAPGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILL 199 (332)
Q Consensus 120 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill 199 (332)
-+.+.+++ +.-++|||++.+-+|...-+- .+..++..-+.++ +.-|..+ |++|+|..--||++
T Consensus 173 pVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v-------~d~~~ly~~lm~~---Iv~la~~---GlIHgDFNEFNimv 235 (465)
T KOG2268|consen 173 PVPKPIDH----NRHCVVMELVDGYPLRQVRHV-------EDPPTLYDDLMGL---IVRLANH---GLIHGDFNEFNIMV 235 (465)
T ss_pred CCCCcccc----cceeeHHHhhcccceeeeeec-------CChHHHHHHHHHH---HHHHHHc---CceecccchheeEE
Confidence 22223332 456899999988777653321 2333333322222 2334455 99999999999999
Q ss_pred CCCCceEEccCCc
Q 020027 200 NEKFCARVCDYGL 212 (332)
Q Consensus 200 ~~~~~~kl~dfg~ 212 (332)
++++.++++||--
T Consensus 236 ~dd~~i~vIDFPQ 248 (465)
T KOG2268|consen 236 KDDDKIVVIDFPQ 248 (465)
T ss_pred ecCCCEEEeechH
Confidence 9999999999963
No 480
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.72 E-value=0.00038 Score=72.30 Aligned_cols=155 Identities=14% Similarity=-0.028 Sum_probs=104.8
Q ss_pred HHHHHhccCCCCCccceeeeee--cCCceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCC--
Q 020027 108 SVIKTLSLAQHPNIVPILGFSQ--APGERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV-- 183 (332)
Q Consensus 108 ~e~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~-- 183 (332)
.|....+...|+++...+.-.. .+...+..++++..|.+...+-......+.++..-+...-.+...+..-+|+..
T Consensus 1278 ~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnl 1357 (2724)
T KOG1826|consen 1278 SERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNL 1357 (2724)
T ss_pred hhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccC
Confidence 3444555668888877665442 234568899999999998887654433333333323222233245555555432
Q ss_pred CCCeeecCCCCCCEEeCCCCceEEccCCccccCCcc-c-----CCcccccCcccccccCCCCCCchhhhHHHHHHHHHHH
Q 020027 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEE-K-----RGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEIL 257 (332)
Q Consensus 184 ~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~-~-----~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~ 257 (332)
+.--+|++||+-|.++..+..+|++++|+.+..... . .+++-|+.++.... -.++.++|+|+.|+-+|+..
T Consensus 1358 g~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~---ik~t~rsdilr~s~~ly~rs 1434 (2724)
T KOG1826|consen 1358 GNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNE---IKFTKRSDILRRSLSLYLRS 1434 (2724)
T ss_pred CccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHH---HhhhhHHHHHHHHHHHHHHh
Confidence 234789999999999999999999999999833222 1 34556677776655 46777799999999999988
Q ss_pred hCCCCCCc
Q 020027 258 SGRRCEEG 265 (332)
Q Consensus 258 tg~~p~~~ 265 (332)
-|..+|..
T Consensus 1435 ~~n~~fi~ 1442 (2724)
T KOG1826|consen 1435 DGNAYFIF 1442 (2724)
T ss_pred cccHHHHH
Confidence 88776643
No 481
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.61 E-value=0.0034 Score=58.67 Aligned_cols=161 Identities=22% Similarity=0.235 Sum_probs=89.8
Q ss_pred cHHHHHHHhccCCCCCccceeeeeecC-CceeEEEeccCCCCHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCC
Q 020027 105 GFASVIKTLSLAQHPNIVPILGFSQAP-GERIIVSEFINMASLDFYLHENNDGASLLDWNRRLRIATGAARGLEYLHQGV 183 (332)
Q Consensus 105 ~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~ 183 (332)
......+.++.+.|+|...++++.... ....+|+|++ +-++++++...... . .. ++ .+
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~l~----~-------~s----~~----~~- 86 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGNLK----D-------ES----LL----AH- 86 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcccc----h-------hh----hc----cc-
Confidence 345556778888999999999987654 3467899998 56898888654311 0 00 01 11
Q ss_pred CCCeeecCCCCCCEEeCCCCceEEccCCccccCCcccCCcccccCcccccccCCCCCCchhhhHHHHHHHHHHHhCCCCC
Q 020027 184 APNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDYWHEKGGGNATRESDVYGFGVVLLEILSGRRCE 263 (332)
Q Consensus 184 ~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~DiwS~G~il~el~tg~~p~ 263 (332)
++.|- |+ .+++| .+.. .| | ....+|+||||+|.++.|+.-|..-+
T Consensus 87 --~~~~~-----~~-------~~~td----~~~t-------~~--~--------~~~~pKsdVwsl~~i~~el~L~~~l~ 131 (725)
T KOG1093|consen 87 --GVLHL-----NI-------IYITD----HFLT-------KY--P--------SPIGPKSDVWSLGFIILELYLGISLE 131 (725)
T ss_pred --cccee-----hh-------hhccc----cccc-------cC--C--------CCCCcchhhhhHHHHHHHHHHhhHHH
Confidence 33332 22 12222 0000 00 0 22236999999999999999887765
Q ss_pred CchhHHHHHHHhhhcccccccCCcCCC--CCChHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 020027 264 EGLLVKWALPLIKEMRFSELLDPRLAI--PCEIKPLVRLAKVALACVGNSRKNRPSIVQV 321 (332)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~c~~~dp~~RPs~~~i 321 (332)
......+....+..-...+...-.+.. .....+.....++...|....|..||...++
T Consensus 132 ~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~ 191 (725)
T KOG1093|consen 132 AELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMEL 191 (725)
T ss_pred HHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHH
Confidence 544433333322221100000000000 0112334466788889999999999866554
No 482
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.48 E-value=0.077 Score=49.06 Aligned_cols=76 Identities=14% Similarity=0.153 Sum_probs=48.5
Q ss_pred CCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccc-----cccccHHHHHHHhccCC---CCCccceeeeeecCCceeE
Q 020027 65 HRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLS-----NAGFGFASVIKTLSLAQ---HPNIVPILGFSQAPGERII 136 (332)
Q Consensus 65 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~l 136 (332)
..+.+|-|....||+.... +..++||.-.+..... ........|...|+.+. ..++.+++.++. +...+
T Consensus 36 ~~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vl 112 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALI 112 (418)
T ss_pred eEEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEE
Confidence 3567899999999998864 5578999876322211 11222344455554442 347777888877 34578
Q ss_pred EEeccCC
Q 020027 137 VSEFINM 143 (332)
Q Consensus 137 v~e~~~~ 143 (332)
+||++++
T Consensus 113 vME~L~~ 119 (418)
T PLN02756 113 GMRYLEP 119 (418)
T ss_pred EEeecCC
Confidence 8999976
No 483
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.46 E-value=0.021 Score=50.50 Aligned_cols=76 Identities=13% Similarity=0.196 Sum_probs=46.1
Q ss_pred CCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCC---CCCccceeeeeecCCceeEEEe
Q 020027 63 FSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ---HPNIVPILGFSQAPGERIIVSE 139 (332)
Q Consensus 63 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e 139 (332)
.+..+.++-|..+.+|+.. .+++.+.+|.-.. .....|..|..-|+.+. --.+.+++++....+..++++|
T Consensus 19 i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~-----~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle 92 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNSE-----SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLE 92 (288)
T ss_dssp --EEEEE--SSSSEEEEEE-TTS-EEEEEEEEG-----GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE
T ss_pred eeeeEecCCCChhheEEEE-CCCccEEEEecCh-----hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEE
Confidence 3445678989999999877 5778999998651 12234677877777663 3456778888877777799999
Q ss_pred ccCCC
Q 020027 140 FINMA 144 (332)
Q Consensus 140 ~~~~~ 144 (332)
|++.+
T Consensus 93 ~l~~~ 97 (288)
T PF03881_consen 93 FLEMG 97 (288)
T ss_dssp -----
T ss_pred eecCC
Confidence 98766
No 484
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.31 E-value=0.059 Score=48.13 Aligned_cols=32 Identities=25% Similarity=0.488 Sum_probs=28.3
Q ss_pred CCeeecCCCCCCEEeCCCCceEEccCCccccC
Q 020027 185 PNIIHGCIKASNILLNEKFCARVCDYGLSFLA 216 (332)
Q Consensus 185 ~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~ 216 (332)
+.++|+|+.+.|++++..+-+-+.||+.+...
T Consensus 198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred ceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 47999999999999998888899999988654
No 485
>PLN02236 choline kinase
Probab=96.24 E-value=0.081 Score=48.14 Aligned_cols=142 Identities=20% Similarity=0.250 Sum_probs=78.3
Q ss_pred ceeeccCCeEEEEEEeCC-----CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCcc-ceeeeeecCCceeEEEec
Q 020027 67 RIIGQGRLGTVYAALLST-----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV-PILGFSQAPGERIIVSEF 140 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~ 140 (332)
+.+..|--..+|+....+ ++.+++|...... ....+..+|..+++.+...++. ++++.+.. + .+.||
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t---~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v~ef 114 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV---ELFFDRDDEIRTFECMSRHGQGPRLLGRFPN-G---RVEEF 114 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC---CeeechHHHHHHHHHHHHcCCCCceEEEECC-c---eEEEe
Confidence 455557778899887432 3678888765432 2223457788888777543333 45555532 2 57899
Q ss_pred cCCCCHHHH-----------------hcccC-CCCC-cCCHHHHHHHHHH-----------------HHHHHHHh----h
Q 020027 141 INMASLDFY-----------------LHENN-DGAS-LLDWNRRLRIATG-----------------AARGLEYL----H 180 (332)
Q Consensus 141 ~~~~~L~~~-----------------l~~~~-~~~~-~l~~~~~~~i~~~-----------------i~~~l~~L----h 180 (332)
+++.++..- +++.. .... ...+.+......+ +...+..| .
T Consensus 115 i~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~ 194 (344)
T PLN02236 115 IHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELS 194 (344)
T ss_pred eCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhc
Confidence 877665421 01100 0000 1112222222211 11111112 2
Q ss_pred c-CCCCCeeecCCCCCCEEeCC-CCceEEccCCcccc
Q 020027 181 Q-GVAPNIIHGCIKASNILLNE-KFCARVCDYGLSFL 215 (332)
Q Consensus 181 ~-~~~~~ivH~dlk~~Nill~~-~~~~kl~dfg~a~~ 215 (332)
. .....++|+|+++.||++++ ++.+.++||..+..
T Consensus 195 ~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 195 GDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred ccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 1 22346899999999999986 56899999977643
No 486
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.15 E-value=0.086 Score=47.87 Aligned_cols=74 Identities=19% Similarity=0.174 Sum_probs=43.3
Q ss_pred eeeccCCeEEEEEEeCCC-CEEEEEEeccCccc-----ccccccHHHHHHHhccCC--CC-CccceeeeeecCCceeEEE
Q 020027 68 IIGQGRLGTVYAALLSTG-KLVAVKRIHPRLVL-----SNAGFGFASVIKTLSLAQ--HP-NIVPILGFSQAPGERIIVS 138 (332)
Q Consensus 68 ~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~-----~~~~~~~~~e~~~l~~l~--h~-niv~~~~~~~~~~~~~lv~ 138 (332)
.+|-|....||++..++| +.|+||.-.+-... .-...+..-|...|+... -| .+.+++.+ ++....++|
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence 579999999999997654 58999976532211 111112345555555432 23 33334433 444556899
Q ss_pred eccCC
Q 020027 139 EFINM 143 (332)
Q Consensus 139 e~~~~ 143 (332)
|+++.
T Consensus 80 EdL~~ 84 (370)
T TIGR01767 80 EDLSH 84 (370)
T ss_pred hhCcc
Confidence 99854
No 487
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=95.87 E-value=0.089 Score=46.28 Aligned_cols=31 Identities=19% Similarity=0.387 Sum_probs=25.2
Q ss_pred CCeeecCCCCCCEEeCCCCc-eEEccCCcccc
Q 020027 185 PNIIHGCIKASNILLNEKFC-ARVCDYGLSFL 215 (332)
Q Consensus 185 ~~ivH~dlk~~Nill~~~~~-~kl~dfg~a~~ 215 (332)
+.++|+|+.+.|+++++++. .-|.||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 36899999999999997554 46999987743
No 488
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.75 E-value=0.12 Score=43.54 Aligned_cols=152 Identities=15% Similarity=0.112 Sum_probs=89.5
Q ss_pred cCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeeecCCceeEEEeccCCCCHHHHhc
Q 020027 72 GRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQAPGERIIVSEFINMASLDFYLH 151 (332)
Q Consensus 72 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 151 (332)
++.++...++.+-| +..+|+++.-..... ..-+..+..+++++. .|+++..= ....+-++.|.|.....
T Consensus 73 ~gNsTl~~~kt~iG-~L~lKKi~slp~~~~-~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i----- 141 (308)
T PF07387_consen 73 NGNSTLLIGKTKIG-PLFLKKIRSLPCCIN-DALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI----- 141 (308)
T ss_pred CCceEEEEeccccc-hhhhhhccCCCcccc-hhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc-----
Confidence 34455555553333 445666653322211 123466777777664 45665521 22345688898842110
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCCcccCCcccccCccc
Q 020027 152 ENNDGASLLDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAPEEKRGLAGYVDDDY 231 (332)
Q Consensus 152 ~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~~~~~~~~~~~~pe~ 231 (332)
.. .-.+..+ ..+|.-.|+. ..+..|+|..|+||+-|..|.+|+.|-+.-.. .+..|..-||
T Consensus 142 --------~~---~N~i~ag-i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~------~~V~~vN~~Y 202 (308)
T PF07387_consen 142 --------NF---SNFITAG-IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE------NQVNMVNIEY 202 (308)
T ss_pred --------ch---hHHHHHh-HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhhh------heeeEEeeec
Confidence 11 1112222 3567778864 45899999999999999999999999754321 1223333222
Q ss_pred ccccCCCCCCchhhhHHHHHHHHHHHhC
Q 020027 232 WHEKGGGNATRESDVYGFGVVLLEILSG 259 (332)
Q Consensus 232 ~~~~~~~~~~~~~DiwS~G~il~el~tg 259 (332)
...|+++.+-+|=.-++++...
T Consensus 203 ------~~lT~~aE~~~fv~s~l~~v~~ 224 (308)
T PF07387_consen 203 ------ESLTQEAEVKVFVKSCLKLVEK 224 (308)
T ss_pred ------cccChHHHHHHHHHHHHHHHHH
Confidence 4467888998888888888763
No 489
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.46 E-value=0.28 Score=44.25 Aligned_cols=141 Identities=16% Similarity=0.215 Sum_probs=76.5
Q ss_pred eeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCC---CCCccc---eeeee--ecCC--ceeEE
Q 020027 68 IIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ---HPNIVP---ILGFS--QAPG--ERIIV 137 (332)
Q Consensus 68 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~---~~~~~--~~~~--~~~lv 137 (332)
.|.+ .-..+|+....+|+. ++|..++. .... +...|+..+..+. .+-.++ .=|-. .-.+ +.+-+
T Consensus 33 ~l~s-~eN~~f~~~~~~g~~-iLki~~~~-~~~~---~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~l 106 (331)
T COG2334 33 GLNS-EENSNFRVQTEDGRY-ILKIYRPG-WTRA---EIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAAL 106 (331)
T ss_pred cccc-ccCceEEEEecCCCe-EEEEecCC-CCHH---HHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEE
Confidence 3444 456789888777766 88888765 2222 2345555555442 111111 11111 1123 67888
Q ss_pred EeccCCCCHHH-H--------------hccc--------CCCCCcCCHHH-------------HHHHHHHHHHHHHHhhc
Q 020027 138 SEFINMASLDF-Y--------------LHEN--------NDGASLLDWNR-------------RLRIATGAARGLEYLHQ 181 (332)
Q Consensus 138 ~e~~~~~~L~~-~--------------l~~~--------~~~~~~l~~~~-------------~~~i~~~i~~~l~~Lh~ 181 (332)
++|++|..+.. . ++.. ........|.. ......++...+..+.+
T Consensus 107 f~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~ 186 (331)
T COG2334 107 FEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLA 186 (331)
T ss_pred EEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHh
Confidence 99999887773 1 0110 00011123320 00122233344444443
Q ss_pred C----CCCC---eeecCCCCCCEEeCCCCc-eEEccCCccc
Q 020027 182 G----VAPN---IIHGCIKASNILLNEKFC-ARVCDYGLSF 214 (332)
Q Consensus 182 ~----~~~~---ivH~dlk~~Nill~~~~~-~kl~dfg~a~ 214 (332)
. .... ++|+|+.|.||+++.+.. +.+.||+-+.
T Consensus 187 ~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 187 RLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred hchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 2 2234 999999999999998875 8899998764
No 490
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.23 E-value=0.33 Score=43.87 Aligned_cols=73 Identities=16% Similarity=0.234 Sum_probs=44.0
Q ss_pred ceeeccCCeEEEEEEeCC----CCEEEEEEeccCcccccccccHHHHHHHhccCCCCCcc-ceeeeeecCCceeEEEecc
Q 020027 67 RIIGQGRLGTVYAALLST----GKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV-PILGFSQAPGERIIVSEFI 141 (332)
Q Consensus 67 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~ 141 (332)
+.|..|--..+|+....+ +..|.+|...... ....+..+|..+++.+...++. ++++++. .+ ++.+|+
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t---~~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi 92 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNT---DYVIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFI 92 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCc---CeEechHHHHHHHHHHHhcCCCCceeEEeC-Cc---Eeehhh
Confidence 455556677888886432 2378888765432 1223457888888877544443 4555542 22 478888
Q ss_pred CCCCH
Q 020027 142 NMASL 146 (332)
Q Consensus 142 ~~~~L 146 (332)
++..+
T Consensus 93 ~g~~l 97 (330)
T PLN02421 93 NARTL 97 (330)
T ss_pred cCCCC
Confidence 76654
No 491
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.15 E-value=0.081 Score=47.78 Aligned_cols=55 Identities=20% Similarity=0.169 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCCCCEEeCCCCceEEccCCccccCC
Q 020027 160 LDWNRRLRIATGAARGLEYLHQGVAPNIIHGCIKASNILLNEKFCARVCDYGLSFLAP 217 (332)
Q Consensus 160 l~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~~~ 217 (332)
-.+.+.+.++.+.+.-+.-+-... ..-|||+.-.|||++ +|++.|+||.+++...
T Consensus 318 ~~~~e~lsff~s~~sil~~lekkf--~fehrnlt~~niLId-~GnvtLIDfklsRl~~ 372 (488)
T COG5072 318 DRSEEELSFFWSCISILDILEKKF--PFEHRNLTLDNILID-EGNVTLIDFKLSRLSY 372 (488)
T ss_pred ccHHHHHHHHHHHHHHHhhhhhcC--Ccccccccccceeee-cCceEEEEeeeeeccc
Confidence 467889999998887777776653 678999999999999 9999999999998543
No 492
>PRK06148 hypothetical protein; Provisional
Probab=94.43 E-value=0.51 Score=49.32 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=26.0
Q ss_pred CCCCeeecCCCCCCEEeCCCC--ceE-EccCCccc
Q 020027 183 VAPNIIHGCIKASNILLNEKF--CAR-VCDYGLSF 214 (332)
Q Consensus 183 ~~~~ivH~dlk~~Nill~~~~--~~k-l~dfg~a~ 214 (332)
.+.+++|.|+.+.||+++.++ .+. |.|||-+.
T Consensus 201 Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 201 LPAQVIHNDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred CCcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence 355899999999999998775 454 89999764
No 493
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=94.30 E-value=0.077 Score=40.03 Aligned_cols=31 Identities=19% Similarity=0.055 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 020027 6 HIAYDCLLAILSLFLIILAIVLIVLCKKKPV 36 (332)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (332)
.++.++++++++++++++++.++++|+||+.
T Consensus 65 ~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk~ 95 (122)
T PF01102_consen 65 AIIGIIFGVMAGVIGIILLISYCIRRLRKKS 95 (122)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHS---
T ss_pred ceeehhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 5677777888888888877777776666553
No 494
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.29 E-value=0.42 Score=40.52 Aligned_cols=76 Identities=14% Similarity=0.167 Sum_probs=48.1
Q ss_pred CceeeccCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCC---CCCccceeeeeecCCceeEEEeccC
Q 020027 66 RRIIGQGRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQ---HPNIVPILGFSQAPGERIIVSEFIN 142 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~ 142 (332)
.+.+.-|.....|.... ...++.+|.-. ......|..|+.-|+.+. --++.+++.+....++.++|+||.+
T Consensus 21 r~~v~gG~inea~~v~d-g~~~~FvK~n~-----~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~ 94 (286)
T COG3001 21 REEVSGGDINEAWRLRD-GTDPFFVKCNQ-----REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLP 94 (286)
T ss_pred ccccCCccccceeEeec-CCcceEEEecc-----hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeecc
Confidence 34454444444444433 34578888643 122235678877776664 3456677777788899999999998
Q ss_pred CCCHH
Q 020027 143 MASLD 147 (332)
Q Consensus 143 ~~~L~ 147 (332)
.+.+.
T Consensus 95 ~~~~d 99 (286)
T COG3001 95 TGPLD 99 (286)
T ss_pred CCCCC
Confidence 86655
No 495
>PRK12396 5-methylribose kinase; Reviewed
Probab=93.82 E-value=0.47 Score=43.80 Aligned_cols=76 Identities=18% Similarity=0.128 Sum_probs=44.8
Q ss_pred CceeeccCCeEEEEEEeCC-CCEEEEEEeccCccc----ccccccHHHHHHHhccCC--CC-CccceeeeeecCCceeEE
Q 020027 66 RRIIGQGRLGTVYAALLST-GKLVAVKRIHPRLVL----SNAGFGFASVIKTLSLAQ--HP-NIVPILGFSQAPGERIIV 137 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~--h~-niv~~~~~~~~~~~~~lv 137 (332)
.+.||-|.-..||++...+ ++.|+||.-.+-... .-...+..-|...|+... -| .+.+++.+ ++....++
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence 4689999999999999643 568999976532221 111112344555555442 23 34445444 33445678
Q ss_pred EeccCC
Q 020027 138 SEFINM 143 (332)
Q Consensus 138 ~e~~~~ 143 (332)
||+++.
T Consensus 112 MEdL~~ 117 (409)
T PRK12396 112 MEDLSD 117 (409)
T ss_pred HHhCcc
Confidence 888753
No 496
>PRK11768 serine/threonine protein kinase; Provisional
Probab=93.22 E-value=2.6 Score=37.97 Aligned_cols=71 Identities=15% Similarity=0.031 Sum_probs=40.8
Q ss_pred cCCeEEEEEEeCCCCEEEEEEeccCcccccccccHHHHHHHhccCCC--CCcccee---e--eeecCCceeEEEeccCCC
Q 020027 72 GRLGTVYAALLSTGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQH--PNIVPIL---G--FSQAPGERIIVSEFINMA 144 (332)
Q Consensus 72 G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~---~--~~~~~~~~~lv~e~~~~~ 144 (332)
+.-..||+....+|..+++|..++... .......|+..+..+.. -.++... | ....++..+.++++++|.
T Consensus 36 s~eN~vy~v~~~~~~~~vlKv~r~~~~---~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~ 112 (325)
T PRK11768 36 SYENRVYQFGDEDGRRVVAKFYRPERW---SDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGR 112 (325)
T ss_pred cccceEEEEecCCCCEEEEEEcCcccC---CHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCC
Confidence 445789999887888899998764321 12234556665554421 1122211 2 122345677889998776
Q ss_pred C
Q 020027 145 S 145 (332)
Q Consensus 145 ~ 145 (332)
.
T Consensus 113 ~ 113 (325)
T PRK11768 113 A 113 (325)
T ss_pred C
Confidence 4
No 497
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=92.51 E-value=0.032 Score=42.34 Aligned_cols=36 Identities=31% Similarity=0.407 Sum_probs=30.5
Q ss_pred CCCCCCceeeccCCeEEEEEEeCCCCEEEEEEeccCc
Q 020027 61 DGFSHRRIIGQGRLGTVYAALLSTGKLVAVKRIHPRL 97 (332)
Q Consensus 61 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~ 97 (332)
+.|+ .+.||.|+.|.||+|++++|+.||||+.++..
T Consensus 12 ~~fd-~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i 47 (119)
T PF03109_consen 12 DEFD-PEPLASASIAQVHRARLKDGEEVAVKVQRPGI 47 (119)
T ss_pred HHCC-cchhhheehhhheeeeecccchhhhhhcchHH
Confidence 3444 36899999999999999999999999988654
No 498
>PTZ00384 choline kinase; Provisional
Probab=92.09 E-value=1.2 Score=41.08 Aligned_cols=75 Identities=17% Similarity=0.222 Sum_probs=44.2
Q ss_pred CceeeccCCeEEEEEEeCCC--CE-----EEEEEeccCcccccccccHHHHHHHhccCCCCCcc-ceeeeeecCCceeEE
Q 020027 66 RRIIGQGRLGTVYAALLSTG--KL-----VAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIV-PILGFSQAPGERIIV 137 (332)
Q Consensus 66 ~~~lg~G~~g~V~~~~~~~~--~~-----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv 137 (332)
.+.+..|--+.+|++...++ .. |.++... .......+..+|+.+++.+...++. ++++.+. -.++
T Consensus 55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g---~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~l 127 (383)
T PTZ00384 55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSS---TYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG----DFTI 127 (383)
T ss_pred EEEeCCcccceEEEEEecCCCCCccccceEEEEecc---CCCceEeccHHHHHHHHHHHhCCCCCeEEEecC----CEEE
Confidence 34565677889999875432 22 3333321 1122223457788888888654444 4455543 2589
Q ss_pred EeccCCCCHH
Q 020027 138 SEFINMASLD 147 (332)
Q Consensus 138 ~e~~~~~~L~ 147 (332)
.||++|..+.
T Consensus 128 ~efIeGr~l~ 137 (383)
T PTZ00384 128 QEWVEGNTMG 137 (383)
T ss_pred EEEeccccCC
Confidence 9999887654
No 499
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=90.39 E-value=0.056 Score=50.52 Aligned_cols=73 Identities=21% Similarity=0.252 Sum_probs=55.3
Q ss_pred HHHhcCCCCCCceeeccCCeEEEEEEeC-CCCEEEEEEeccCcccccccccHHHHHHHhccCCCCCccceeeeee
Q 020027 56 IDAATDGFSHRRIIGQGRLGTVYAALLS-TGKLVAVKRIHPRLVLSNAGFGFASVIKTLSLAQHPNIVPILGFSQ 129 (332)
Q Consensus 56 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 129 (332)
.....++|+....+|.|+||+|+.+... ++..+|||.+....... ......+|..-++++.|+++++++..+.
T Consensus 44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~-s~~rvl~~~~s~a~feh~g~~~~~ha~~ 117 (516)
T KOG1033|consen 44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREE-SRSRVLREVSSLAEFEHPGIKRYFHAWY 117 (516)
T ss_pred hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhh-hhhhhhccccchhhhcccchhhheecee
Confidence 3345678999999999999999999854 44589999987554322 2234577788888999999999876654
No 500
>PRK10271 thiK thiamine kinase; Provisional
Probab=90.27 E-value=0.27 Score=40.42 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=25.7
Q ss_pred CCeeecCCCCCCEEeCCCCceEEccCCcccc
Q 020027 185 PNIIHGCIKASNILLNEKFCARVCDYGLSFL 215 (332)
Q Consensus 185 ~~ivH~dlk~~Nill~~~~~~kl~dfg~a~~ 215 (332)
...+|+|+.|.|+++++++ ++++||+.+..
T Consensus 77 ~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~ 106 (188)
T PRK10271 77 LAPLHMDVHAGNLVHSASG-LRLIDWEYAGD 106 (188)
T ss_pred eeeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence 3579999999999998877 89999987754
Done!