Query 020029
Match_columns 332
No_of_seqs 158 out of 2038
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 06:27:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020029.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020029hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 5.2E-61 1.1E-65 451.3 27.0 307 1-322 179-488 (489)
2 PLN02971 tryptophan N-hydroxyl 100.0 4.7E-55 1E-59 422.8 28.0 273 41-321 254-533 (543)
3 KOG0158 Cytochrome P450 CYP3/C 100.0 1.2E-54 2.5E-59 403.6 24.1 226 95-322 263-499 (499)
4 PLN03234 cytochrome P450 83B1; 100.0 2.6E-54 5.7E-59 414.5 27.2 307 1-321 181-498 (499)
5 KOG0159 Cytochrome P450 CYP11/ 100.0 3.1E-54 6.7E-59 393.2 24.6 304 1-323 212-519 (519)
6 PLN00110 flavonoid 3',5'-hydro 100.0 6E-54 1.3E-58 411.5 27.6 308 1-322 183-497 (504)
7 PLN02183 ferulate 5-hydroxylas 100.0 3.9E-53 8.6E-58 407.5 28.4 309 1-321 185-511 (516)
8 PLN03112 cytochrome P450 famil 100.0 5.9E-53 1.3E-57 406.5 29.2 315 1-323 184-509 (514)
9 PLN02655 ent-kaurene oxidase 100.0 9.4E-53 2E-57 400.2 29.4 286 25-324 180-466 (466)
10 PLN02687 flavonoid 3'-monooxyg 100.0 5.1E-53 1.1E-57 406.8 27.7 310 1-322 185-509 (517)
11 PLN02290 cytokinin trans-hydro 100.0 2E-52 4.3E-57 403.0 28.5 267 45-322 245-515 (516)
12 PLN00168 Cytochrome P450; Prov 100.0 3E-52 6.6E-57 401.6 29.7 314 2-324 191-519 (519)
13 PLN02394 trans-cinnamate 4-mon 100.0 4.4E-52 9.6E-57 399.5 29.3 225 97-323 272-503 (503)
14 PLN02966 cytochrome P450 83A1 100.0 4.6E-52 1E-56 398.9 27.2 304 1-318 182-496 (502)
15 PF00067 p450: Cytochrome P450 100.0 7.5E-53 1.6E-57 398.1 21.4 303 1-318 153-463 (463)
16 PTZ00404 cytochrome P450; Prov 100.0 7E-52 1.5E-56 396.1 26.7 303 1-321 178-482 (482)
17 PLN02169 fatty acid (omega-1)- 100.0 9.8E-52 2.1E-56 395.6 27.3 253 58-321 240-499 (500)
18 PLN03018 homomethionine N-hydr 100.0 3.6E-51 7.8E-56 393.8 30.6 274 43-323 241-525 (534)
19 KOG0157 Cytochrome P450 CYP4/C 100.0 1.4E-51 3.1E-56 393.0 25.2 288 23-322 203-496 (497)
20 PLN02738 carotene beta-ring hy 100.0 5.8E-51 1.3E-55 397.3 29.7 259 60-324 333-597 (633)
21 PLN03195 fatty acid omega-hydr 100.0 4.3E-51 9.4E-56 393.6 25.8 258 60-322 235-516 (516)
22 PLN02500 cytochrome P450 90B1 100.0 4.7E-50 1E-54 384.0 28.8 247 60-320 229-488 (490)
23 PLN02426 cytochrome P450, fami 100.0 3.5E-50 7.5E-55 384.7 25.5 248 59-323 248-501 (502)
24 PLN02936 epsilon-ring hydroxyl 100.0 8.3E-49 1.8E-53 375.0 29.0 260 60-325 219-485 (489)
25 PLN03141 3-epi-6-deoxocathaste 100.0 2.4E-48 5.1E-53 368.7 28.2 251 60-323 197-451 (452)
26 PLN02774 brassinosteroid-6-oxi 100.0 1.8E-48 3.9E-53 370.5 27.4 244 60-320 216-462 (463)
27 PLN02987 Cytochrome P450, fami 100.0 3.1E-47 6.7E-52 361.7 29.2 249 59-322 217-469 (472)
28 PLN02302 ent-kaurenoic acid ox 100.0 7.5E-47 1.6E-51 362.3 29.3 253 60-323 233-489 (490)
29 PLN02196 abscisic acid 8'-hydr 100.0 1.7E-46 3.6E-51 356.9 26.5 240 60-320 219-461 (463)
30 KOG0684 Cytochrome P450 [Secon 100.0 1.9E-46 4E-51 334.8 23.0 260 46-322 214-485 (486)
31 COG2124 CypX Cytochrome P450 [ 100.0 5.7E-42 1.2E-46 320.0 20.9 222 60-321 189-410 (411)
32 PLN02648 allene oxide synthase 100.0 1.7E-37 3.8E-42 293.9 20.9 181 115-297 266-463 (480)
33 PF08492 SRP72: SRP72 RNA-bind 40.4 22 0.00047 23.4 1.7 8 242-249 44-51 (59)
34 PF05952 ComX: Bacillus compet 34.3 49 0.0011 21.5 2.6 19 141-159 3-21 (57)
35 PF09201 SRX: SRX; InterPro: 30.6 40 0.00087 26.2 2.0 23 266-288 18-40 (148)
36 PF12508 DUF3714: Protein of u 30.3 43 0.00094 28.1 2.4 43 179-223 52-94 (200)
37 PRK06789 flagellar motor switc 29.3 67 0.0015 22.2 2.8 41 185-225 21-63 (74)
38 KOG3506 40S ribosomal protein 28.6 26 0.00056 22.4 0.6 11 259-269 12-22 (56)
39 PF14129 DUF4296: Domain of un 28.3 2.2E+02 0.0047 20.1 6.3 50 116-165 29-78 (87)
40 PF08285 DPM3: Dolichol-phosph 26.0 94 0.002 22.4 3.2 28 137-164 53-80 (91)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.2e-61 Score=451.28 Aligned_cols=307 Identities=44% Similarity=0.751 Sum_probs=270.2
Q ss_pred CceeeecccccchhhcccchHHHHHHHHHHHHHhhhhcccccCcccc-cccccccCccHHHHHHHHHHHHHHHHHHHHHH
Q 020029 1 MMRIVAGKRGTEEVAGAANMEVAKKFLLEFKEIFFPSMITNICDLFP-ILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDD 79 (332)
Q Consensus 1 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 79 (332)
|.+++||+||..+ ..++..++.+++.+.....+.+++.+++| +++++++..+..+++.....+++.+++.+|++
T Consensus 179 I~~~~fG~rf~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~e 253 (489)
T KOG0156|consen 179 ICRMLFGRRFEEE-----DEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDE 253 (489)
T ss_pred HHHHHhCCccccC-----CchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999653 23667889999999999999999999999 67788743577778888888899999999999
Q ss_pred HHHHHhhccCccccccccchhHHHHHHhcccCCCCC-CCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHH
Q 020029 80 IRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEF-YSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVR 158 (332)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~-~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~ 158 (332)
+++.. +. + +. .|++|.+|+..+++... +++++|...+.++++||.|||++++.|++.+|++||++|+|++
T Consensus 254 h~~~~-~~-~-----~~--~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~q 324 (489)
T KOG0156|consen 254 HREKI-GD-E-----EG--RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQ 324 (489)
T ss_pred HHhhh-cc-C-----CC--CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHH
Confidence 98875 11 1 12 89999999975543222 8999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhhcCCCCCCCC
Q 020029 159 AEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEP 238 (332)
Q Consensus 159 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p 238 (332)
+||+.++|.++.++.+|+.++|||+|+|+|++|+||++|+.++|.+.+|+.++||.|||||.|.++.|++|+||++|+||
T Consensus 325 eEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP 404 (489)
T KOG0156|consen 325 EEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDP 404 (489)
T ss_pred HHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCc
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCC-CCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCCCcccccceeecCCCceEEE
Q 020029 239 NKFKPERFEGIH-SEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEVDMTASYGLSLSKTVPLVAM 317 (332)
Q Consensus 239 ~~F~P~R~l~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 317 (332)
++|+||||++.. .......++|||.|+|+|||..+|++++.++++.||++|+|+.+++..++... ++++..+.|+.+.
T Consensus 405 ~eF~PERFl~~~d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~-~~~~~~~~pl~~~ 483 (489)
T KOG0156|consen 405 EEFKPERFLDSNDGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEA-GLTLKKKKPLKAV 483 (489)
T ss_pred cccChhhhcCCccccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCccc-ccceecCCcceee
Confidence 999999999974 33477899999999999999999999999999999999999998762255544 3666677788877
Q ss_pred eecCC
Q 020029 318 CSPRQ 322 (332)
Q Consensus 318 ~~~r~ 322 (332)
..+|.
T Consensus 484 ~~~r~ 488 (489)
T KOG0156|consen 484 PVPRL 488 (489)
T ss_pred eecCC
Confidence 77764
No 2
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=4.7e-55 Score=422.75 Aligned_cols=273 Identities=29% Similarity=0.576 Sum_probs=230.1
Q ss_pred ccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCC-CCCHH
Q 020029 41 NICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPE-FYSDD 119 (332)
Q Consensus 41 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~-~~~~~ 119 (332)
.+.+++|++++++. .+..+...+..+.+.+++..+++++++...... .....|+++.+++...+++. .++++
T Consensus 254 ~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~~~d~l~~ll~~~~~~~~~~ls~~ 326 (543)
T PLN02971 254 CISDYLPMLTGLDL-NGHEKIMRESSAIMDKYHDPIIDERIKMWREGK------RTQIEDFLDIFISIKDEAGQPLLTAD 326 (543)
T ss_pred cHHHhCCchhhhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccC------CCCCcCHHHHHHhhhcccCCCCCCHH
Confidence 34567787766643 344455666778888889999988776532210 12346999999985432222 48999
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccC
Q 020029 120 VLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRAEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLL 199 (332)
Q Consensus 120 ~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~ 199 (332)
+|.+++.++++||+|||+++++|++++|+.||++|+|+++||+.+++.++.++.+++.+|||++|||+|++|++|++|+.
T Consensus 327 ~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~ 406 (543)
T PLN02971 327 EIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFN 406 (543)
T ss_pred HHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccC
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999999999997
Q ss_pred cccccccceeecCeEeCCCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCCC----CCCCcccccCCCCCCCccHHHHH
Q 020029 200 LPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSE----REGFKHIPFGMGRRACPGAAMAI 275 (332)
Q Consensus 200 ~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~----~~~~~~~~Fg~G~r~C~G~~~A~ 275 (332)
++|.+.+|+.++||.||||+.|+++.|++||||++|+||++|+||||++.... ..+..++|||+|+|+|+|++||+
T Consensus 407 ~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~ 486 (543)
T PLN02971 407 LPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGT 486 (543)
T ss_pred cceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHH
Confidence 89999999999999999999999999999999999999999999999975321 23568999999999999999999
Q ss_pred HHHHHHHHHHHHhcEeeecCCCC--CcccccceeecCCCceEEEeecC
Q 020029 276 RTISFALGSLIQCFEWEKIGPEV--DMTASYGLSLSKTVPLVAMCSPR 321 (332)
Q Consensus 276 ~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~r 321 (332)
.|++++++.||++|+|+..++.. ++...++ ++..++++.+.+++|
T Consensus 487 ~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 533 (543)
T PLN02971 487 AITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGELR 533 (543)
T ss_pred HHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeeeec
Confidence 99999999999999999876432 4555556 554557999999999
No 3
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-54 Score=403.63 Aligned_cols=226 Identities=36% Similarity=0.607 Sum_probs=203.9
Q ss_pred cccchhHHHHHHhcccC---C--CC-CCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhCC
Q 020029 95 SVRNKSLIETLLSLQES---E--PE-FYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRAEIDCNVANG 168 (332)
Q Consensus 95 ~~~~~dl~~~ll~~~~~---~--~~-~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~ 168 (332)
...+.|+++.+++.... + .. .++.++|+++++.+++||.||||++|+.++|+|++||++|+|||+||+++....
T Consensus 263 ~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~ 342 (499)
T KOG0158|consen 263 NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEK 342 (499)
T ss_pred CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccc
Confidence 35678999999987632 1 11 599999999999999999999999999999999999999999999999997766
Q ss_pred CCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeec-CeEeCCCCEEEechHHhhcCCCCCCCCCCcCCCCCC
Q 020029 169 RMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVG-GYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFE 247 (332)
Q Consensus 169 ~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l 247 (332)
..++++.+.+|+||++||+||||+||++|. +.|.+.+|.+++ ++.|+||+.|.++.|++||||++||||++|+||||.
T Consensus 343 ~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~ 421 (499)
T KOG0158|consen 343 EGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFE 421 (499)
T ss_pred CCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCC
Confidence 659999999999999999999999999999 689999999999 999999999999999999999999999999999999
Q ss_pred CCCC-CCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCCCccccc---ceeecCCCceEEEeecCC
Q 020029 248 GIHS-EREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEVDMTASY---GLSLSKTVPLVAMCSPRQ 322 (332)
Q Consensus 248 ~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~r~ 322 (332)
+... ...+..|+|||.|||+|+|++||.+|+|+.|+.||++|+++..+.+... -.. ++++.|+.++.+++++|.
T Consensus 422 ~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~-~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 422 EENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIP-LEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred CCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCc-ccCCccceeeecCCceEEEEEeCC
Confidence 8764 4577899999999999999999999999999999999999987632222 333 677889999999999984
No 4
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=2.6e-54 Score=414.49 Aligned_cols=307 Identities=31% Similarity=0.548 Sum_probs=248.3
Q ss_pred CceeeecccccchhhcccchHHHHHHHHHHHHHhhhhcccccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHHHH
Q 020029 1 MMRIVAGKRGTEEVAGAANMEVAKKFLLEFKEIFFPSMITNICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDI 80 (332)
Q Consensus 1 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (332)
|++++||.++... .++..++.+.+.+.....+.....+++|++++++.+.+..+++.+..+.+.+++..+++++
T Consensus 181 i~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 254 (499)
T PLN03234 181 VCRQAFGKRYNEY------GTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDET 254 (499)
T ss_pred HHHHHhCCccccc------chhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567889877322 1345667777766654444344445667665554323444677888899999999999887
Q ss_pred HHHHhhccCccccccccchhHHHHHHhcccCCC--CCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHH
Q 020029 81 RIRLKKTSSSFETASVRNKSLIETLLSLQESEP--EFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVR 158 (332)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~--~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~ 158 (332)
++... . .....|+++.+++..++++ ..+++++|.+++.++++||+|||+++++|++++|++||++|++++
T Consensus 255 ~~~~~---~-----~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~ 326 (499)
T PLN03234 255 LDPNR---P-----KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQ 326 (499)
T ss_pred Hhhcc---c-----CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHH
Confidence 54311 1 1235689999887543222 358999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhhcCCCCC-CC
Q 020029 159 AEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EE 237 (332)
Q Consensus 159 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~ 237 (332)
+|++.++++.+.++.+++.+|||++|||+|++|++|++++.++|.+.+|++++|+.|||||.|.++.|++||||++| +|
T Consensus 327 ~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~ 406 (499)
T PLN03234 327 DEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDN 406 (499)
T ss_pred HHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCC
Confidence 99999998777789999999999999999999999999997789999999999999999999999999999999999 89
Q ss_pred CCCcCCCCCCCCCCC----CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCC----Ccccccceeec
Q 020029 238 PNKFKPERFEGIHSE----REGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEV----DMTASYGLSLS 309 (332)
Q Consensus 238 p~~F~P~R~l~~~~~----~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~----~~~~~~~~~~~ 309 (332)
|++|+||||++.... .....++|||+|+|+|+|+++|++|++++++.|+++|+++++++.. .....++++..
T Consensus 407 P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~ 486 (499)
T PLN03234 407 PNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMH 486 (499)
T ss_pred hhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccc
Confidence 999999999975422 2356899999999999999999999999999999999999876521 33446688777
Q ss_pred CCCceEEEeecC
Q 020029 310 KTVPLVAMCSPR 321 (332)
Q Consensus 310 ~~~~~~v~~~~r 321 (332)
|+.++.+.++.|
T Consensus 487 ~~~~~~~~~~~~ 498 (499)
T PLN03234 487 KKEHLVLAPTKH 498 (499)
T ss_pred cCCCeEEEeecC
Confidence 878887777665
No 5
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-54 Score=393.25 Aligned_cols=304 Identities=28% Similarity=0.426 Sum_probs=260.0
Q ss_pred Cceeeecccc--cchhhcccchHHHHHHHHHHHHHhhhhcccccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHH
Q 020029 1 MMRIVAGKRG--TEEVAGAANMEVAKKFLLEFKEIFFPSMITNICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLID 78 (332)
Q Consensus 1 i~~~~fG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 78 (332)
|..++||+|. .++ ..+++.+.|.+++++++.+.....+. .+++++++. +.++++.++.+.+.++...+|+
T Consensus 212 i~~V~l~~rlG~L~~----~~~~~a~~fi~ai~~~F~~s~~l~~~--p~l~r~~~t--~~wk~~~~~~D~i~~~~~~~Id 283 (519)
T KOG0159|consen 212 ICLVLLGTRLGLLGE----SPPSEAQQFIDAIKKMFESSAQLMLM--PSLWRYFPT--KVWKDFVRAWDQIFDVGDKYID 283 (519)
T ss_pred HHHHHHhcccccccC----CCCHHHHHHHHHHHHHHHhHHHHHhc--chHHHhCCC--hHHHHHHHHHHHHHHHHHHHHH
Confidence 4568899986 222 14578999999999999886543322 255667764 4459999999999999999999
Q ss_pred HHHHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHH
Q 020029 79 DIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVR 158 (332)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~ 158 (332)
+..+++++++.. ..+....+-.+|.. ..++.+++...+.+++.||.|||++++.|++|+|++||+.|++|+
T Consensus 284 ~~l~~l~~~~~~----~~~~~~~l~~~L~~-----~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~ 354 (519)
T KOG0159|consen 284 NALEELEKQDSA----GSEYTGSLLELLLR-----KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLR 354 (519)
T ss_pred HHHHHHHhcccc----ccchhHHHHHHHHH-----ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHH
Confidence 999988665221 12333444444432 247889999999999999999999999999999999999999999
Q ss_pred HHHhhhhhC-CCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhhcCCCCCCC
Q 020029 159 AEIDCNVAN-GRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEE 237 (332)
Q Consensus 159 ~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~ 237 (332)
+|+..++++ +..++.+++.++|||+|||||++|+||.+|+. .|+..+|.+++||.|||||.|.+..+.+.+||++|++
T Consensus 355 ~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~ 433 (519)
T KOG0159|consen 355 EEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPD 433 (519)
T ss_pred HHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccceecCCCeEEEeehhhccChhhCCC
Confidence 999999987 67789999999999999999999999999996 6999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCC-CCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCCCcccccceeecCCCceEE
Q 020029 238 PNKFKPERFEGIH-SEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEVDMTASYGLSLSKTVPLVA 316 (332)
Q Consensus 238 p~~F~P~R~l~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v 316 (332)
|++|+|+|||... +..+++.++|||.|+|+|+|++||.+||-+.|+.|+++|+++..+.. +....+.+++.|..|+.+
T Consensus 434 p~~F~PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~-pv~~~~~~il~P~~~l~f 512 (519)
T KOG0159|consen 434 PEEFLPERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE-PVEYVYRFILVPNRPLRF 512 (519)
T ss_pred ccccChhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC-CccceeEEEEcCCCCcce
Confidence 9999999999988 77889999999999999999999999999999999999999987643 566677788889999999
Q ss_pred EeecCCC
Q 020029 317 MCSPRQD 323 (332)
Q Consensus 317 ~~~~r~~ 323 (332)
+|++|..
T Consensus 513 ~f~~r~~ 519 (519)
T KOG0159|consen 513 KFRPRNE 519 (519)
T ss_pred eeeeCCC
Confidence 9999863
No 6
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=6e-54 Score=411.52 Aligned_cols=308 Identities=32% Similarity=0.631 Sum_probs=250.4
Q ss_pred CceeeecccccchhhcccchHHHHHHHHHHHHHhhhhcccccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHHHH
Q 020029 1 MMRIVAGKRGTEEVAGAANMEVAKKFLLEFKEIFFPSMITNICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDI 80 (332)
Q Consensus 1 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (332)
|+.++||.+++.. ...+..+|.++++..+.......+.+++|++.|++. .+..+.+.+..+.+..++...++++
T Consensus 183 i~~~~fg~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~~ 256 (504)
T PLN00110 183 IGQVILSRRVFET-----KGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDI-QGIERGMKHLHKKFDKLLTRMIEEH 256 (504)
T ss_pred HHHHHhCCccccc-----CchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457788876322 112346677777777655444445567787666543 3444566677788888888888877
Q ss_pred HHHHhhccCccccccccchhHHHHHHhcccC-CCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHH
Q 020029 81 RIRLKKTSSSFETASVRNKSLIETLLSLQES-EPEFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRA 159 (332)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~-~~~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~ 159 (332)
++.... .....|+++.+++.... ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++
T Consensus 257 ~~~~~~--------~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~ 328 (504)
T PLN00110 257 TASAHE--------RKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHE 328 (504)
T ss_pred Hhhccc--------cccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHH
Confidence 654211 12346899999975432 234689999999999999999999999999999999999999999999
Q ss_pred HHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhhcCCCCCCCCC
Q 020029 160 EIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPN 239 (332)
Q Consensus 160 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~ 239 (332)
|++.+++++..++.+++.++||++|||+|++|++|++++.++|.+.+|+.++|+.||||+.|.++.|++|+||++|+||+
T Consensus 329 Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~ 408 (504)
T PLN00110 329 EMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPE 408 (504)
T ss_pred HHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcc
Confidence 99999987777899999999999999999999999999878899999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCCCC--C---CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCC-CcccccceeecCCCc
Q 020029 240 KFKPERFEGIHSE--R---EGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEV-DMTASYGLSLSKTVP 313 (332)
Q Consensus 240 ~F~P~R~l~~~~~--~---~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~ 313 (332)
+|+||||++.... . ....++|||+|+|.|+|++||++|++++++.|+++|++++.++.. +.....++++.|+.|
T Consensus 409 ~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (504)
T PLN00110 409 EFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVP 488 (504)
T ss_pred cCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCC
Confidence 9999999964321 1 135799999999999999999999999999999999999866542 333356777788889
Q ss_pred eEEEeecCC
Q 020029 314 LVAMCSPRQ 322 (332)
Q Consensus 314 ~~v~~~~r~ 322 (332)
+++++++|.
T Consensus 489 ~~~~~~~r~ 497 (504)
T PLN00110 489 LSAMVTPRL 497 (504)
T ss_pred ceEeeccCC
Confidence 999999994
No 7
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=3.9e-53 Score=407.48 Aligned_cols=309 Identities=34% Similarity=0.622 Sum_probs=244.8
Q ss_pred CceeeecccccchhhcccchHHHHHHHHHHHHHhhhhcccccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHHHH
Q 020029 1 MMRIVAGKRGTEEVAGAANMEVAKKFLLEFKEIFFPSMITNICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDI 80 (332)
Q Consensus 1 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (332)
|++++||..+..+ .+++.+.+..+...+....+.+++|+++++.. ....+++.+..+.+.+++..+++++
T Consensus 185 i~~~~fG~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~ 254 (516)
T PLN02183 185 TYRAAFGSSSNEG---------QDEFIKILQEFSKLFGAFNVADFIPWLGWIDP-QGLNKRLVKARKSLDGFIDDIIDDH 254 (516)
T ss_pred HHhHhhcCcccch---------HHHHHHHHHHHHHHhCCccHHHhcchhHhccc-ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888765322 24566666666555544555667787765532 3334667778888899999888888
Q ss_pred HHHHhhccCccccccccchhHHHHHHhcccC-----------CCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhh
Q 020029 81 RIRLKKTSSSFETASVRNKSLIETLLSLQES-----------EPEFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLN 149 (332)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~-----------~~~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~ 149 (332)
+++....... ........|+++.+++.... ++..++++++.+++.++++||+|||+++++|++++|++
T Consensus 255 ~~~~~~~~~~-~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~ 333 (516)
T PLN02183 255 IQKRKNQNAD-NDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMK 333 (516)
T ss_pred HHhhcccccc-cccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHh
Confidence 7653221100 00012346899999974321 11258999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhh
Q 020029 150 NPDVLQKVRAEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMH 229 (332)
Q Consensus 150 ~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~ 229 (332)
||++|+|+++|++.+++.++.++.+++.++||++|||+|+||++|++|+. .|.+.+|++++|+.|||||.|.++.|++|
T Consensus 334 ~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~h 412 (516)
T PLN02183 334 SPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIG 412 (516)
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhc
Confidence 99999999999999998667789999999999999999999999999996 59999999999999999999999999999
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCC----Cccc
Q 020029 230 RDSKVWEEPNKFKPERFEGIHSE---REGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEV----DMTA 302 (332)
Q Consensus 230 ~d~~~~~~p~~F~P~R~l~~~~~---~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~----~~~~ 302 (332)
|||++|+||++|+||||++.... .....++|||+|+|+|+|++||++|+++++|.|+++|+++..++.. +...
T Consensus 413 rd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~ 492 (516)
T PLN02183 413 RDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMND 492 (516)
T ss_pred CCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhh
Confidence 99999999999999999964321 2446899999999999999999999999999999999999866432 2223
Q ss_pred ccceeecCCCceEEEeecC
Q 020029 303 SYGLSLSKTVPLVAMCSPR 321 (332)
Q Consensus 303 ~~~~~~~~~~~~~v~~~~r 321 (332)
.++.+..+.+++.+.+++|
T Consensus 493 ~~~~~~~~~~~~~~~~~~r 511 (516)
T PLN02183 493 VFGLTAPRATRLVAVPTYR 511 (516)
T ss_pred ccccccccCCCcEEEeecC
Confidence 4466555666888888877
No 8
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=5.9e-53 Score=406.49 Aligned_cols=315 Identities=33% Similarity=0.599 Sum_probs=252.2
Q ss_pred CceeeecccccchhhcccchHHHHHHHHHHHHHhhhhcccccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHHHH
Q 020029 1 MMRIVAGKRGTEEVAGAANMEVAKKFLLEFKEIFFPSMITNICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDI 80 (332)
Q Consensus 1 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (332)
|++++||.++.+. .....++..+|.++++.++.......+.+++|++++++. .+..+++.+..+.+.+++..+++++
T Consensus 184 i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~ 260 (514)
T PLN03112 184 VTRMLLGKQYFGA--ESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP-YGCEKKMREVEKRVDEFHDKIIDEH 260 (514)
T ss_pred HHHHHcCCccccc--cccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc-ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567899886332 000113456788888777665443445566787666543 3344667778888888999999887
Q ss_pred HHHHhhccCccccccccchhHHHHHHhcccCCC-CCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHH
Q 020029 81 RIRLKKTSSSFETASVRNKSLIETLLSLQESEP-EFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRA 159 (332)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~-~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~ 159 (332)
++....... .....|+++.+++....++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++
T Consensus 261 ~~~~~~~~~-----~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~ 335 (514)
T PLN03112 261 RRARSGKLP-----GGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQE 335 (514)
T ss_pred HHhhccccc-----CCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHH
Confidence 765321100 1234699999998543222 3589999999999999999999999999999999999999999999
Q ss_pred HHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhhcCCCCCCCCC
Q 020029 160 EIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPN 239 (332)
Q Consensus 160 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~ 239 (332)
|+++++++++.++.+++.+|||++|||+|++|++|++++.++|.+.+|+.++|+.|||||.|.++.|++||||++|+||+
T Consensus 336 Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~ 415 (514)
T PLN03112 336 ELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVE 415 (514)
T ss_pred HHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChh
Confidence 99999988777899999999999999999999999999877899999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCCC---C---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCC----Ccccccceeec
Q 020029 240 KFKPERFEGIHS---E---REGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEV----DMTASYGLSLS 309 (332)
Q Consensus 240 ~F~P~R~l~~~~---~---~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~----~~~~~~~~~~~ 309 (332)
+|+|+||.+..+ . .....++|||.|+|+|+|++||++|++++++.||++|++++.++.. +....++++..
T Consensus 416 ~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~ 495 (514)
T PLN03112 416 EFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMP 495 (514)
T ss_pred hcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccc
Confidence 999999875321 1 1245899999999999999999999999999999999999865421 23334567767
Q ss_pred CCCceEEEeecCCC
Q 020029 310 KTVPLVAMCSPRQD 323 (332)
Q Consensus 310 ~~~~~~v~~~~r~~ 323 (332)
+++++.+.++||..
T Consensus 496 ~~~~~~~~~~~r~~ 509 (514)
T PLN03112 496 KAKPLRAVATPRLA 509 (514)
T ss_pred cCCCeEEEeecCCc
Confidence 77899999999964
No 9
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=9.4e-53 Score=400.17 Aligned_cols=286 Identities=34% Similarity=0.563 Sum_probs=237.3
Q ss_pred HHHHHHHHHhhhhcccccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHH
Q 020029 25 KFLLEFKEIFFPSMITNICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIET 104 (332)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ 104 (332)
.|...+..++.......+.+++|++++++. ..+.+...+....+.+++..++++++++... .....|+++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~d~l~~ 250 (466)
T PLN02655 180 IFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKRIAR--------GEERDCYLDF 250 (466)
T ss_pred HHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--------CCCcccHHHH
Confidence 345555555554444445567888777765 4443444445555667888888877765322 1224589999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhCCCCCChhhhcCChhHHH
Q 020029 105 LLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRAEIDCNVANGRMLNDEDLVNLPYLCC 184 (332)
Q Consensus 105 ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a 184 (332)
+++.. ..++++++.+++.++++||+|||+++++|++++|+.||++|+++++||+.+++++. ++.+++.++||++|
T Consensus 251 ll~~~----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a 325 (466)
T PLN02655 251 LLSEA----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNA 325 (466)
T ss_pred HHhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHH
Confidence 99753 24899999999999999999999999999999999999999999999999998754 89999999999999
Q ss_pred HHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCCC-CCCCcccccCC
Q 020029 185 VIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSE-REGFKHIPFGM 263 (332)
Q Consensus 185 ~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~-~~~~~~~~Fg~ 263 (332)
||+|+||++|+++...+|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+|+||++.... .....++|||+
T Consensus 326 ~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~~~~~~~~~Fg~ 405 (466)
T PLN02655 326 VFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESADMYKTMAFGA 405 (466)
T ss_pred HHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcccCCcccccCCCC
Confidence 99999999999999878999999999999999999999999999999999999999999999975422 23478999999
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCCCcccccceeecCCCceEEEeecCCCc
Q 020029 264 GRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEVDMTASYGLSLSKTVPLVAMCSPRQDM 324 (332)
Q Consensus 264 G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~ 324 (332)
|+|.|+|++||..|++++++.||++|++++.++..+.....+++..++.|+.+++++|.+|
T Consensus 406 G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 466 (466)
T PLN02655 406 GKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHPLHAHLKPRGSM 466 (466)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCCcEEEEeecCCC
Confidence 9999999999999999999999999999986553333445677777888999999999875
No 10
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=5.1e-53 Score=406.78 Aligned_cols=310 Identities=34% Similarity=0.666 Sum_probs=249.8
Q ss_pred CceeeecccccchhhcccchHHHHHHHHHHHHHhhhhcccccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHHHH
Q 020029 1 MMRIVAGKRGTEEVAGAANMEVAKKFLLEFKEIFFPSMITNICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDI 80 (332)
Q Consensus 1 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (332)
|+.++||+++... ..++..+.+.+++..++...+...+.+++|++++++. .+..++..+..+.+.+++..+++++
T Consensus 185 i~~~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~r 259 (517)
T PLN02687 185 LGRAMVGRRVFAG----DGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL-QGVVGKMKRLHRRFDAMMNGIIEEH 259 (517)
T ss_pred HHHHHhCcccccc----CCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCc-ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567899886321 0123446677777777665544444567787666644 3333566677788888888888888
Q ss_pred HHHHhhccCccccccccchhHHHHHHhcccC-----CCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHH
Q 020029 81 RIRLKKTSSSFETASVRNKSLIETLLSLQES-----EPEFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQ 155 (332)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~-----~~~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~ 155 (332)
++..... .....|+++.+++.... ++..++++++.+++..+++||+|||+++++|++++|++||++|+
T Consensus 260 ~~~~~~~-------~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~ 332 (517)
T PLN02687 260 KAAGQTG-------SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILK 332 (517)
T ss_pred HHhcccc-------CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHH
Confidence 7653211 12346999999986432 23458999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhhcCCCCC
Q 020029 156 KVRAEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW 235 (332)
Q Consensus 156 ~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~ 235 (332)
++++|++.+++.++.++.+++.++||++|||+|++|++|+++..++|.+.+|++++|+.||+|+.|.++.|++||||++|
T Consensus 333 kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~ 412 (517)
T PLN02687 333 KAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQW 412 (517)
T ss_pred HHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccC
Confidence 99999999998777889999999999999999999999999987789999999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCC------CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCC--Cc--ccccc
Q 020029 236 EEPNKFKPERFEGIHSE------REGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEV--DM--TASYG 305 (332)
Q Consensus 236 ~~p~~F~P~R~l~~~~~------~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~~--~~~~~ 305 (332)
+||++|+|+||++.... ..+..++|||+|+|+|+|++||++|++++++.||++|++++.++.. +. ....+
T Consensus 413 ~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~ 492 (517)
T PLN02687 413 PDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYG 492 (517)
T ss_pred CCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccc
Confidence 99999999999974321 2345799999999999999999999999999999999999875432 22 22445
Q ss_pred eeecCCCceEEEeecCC
Q 020029 306 LSLSKTVPLVAMCSPRQ 322 (332)
Q Consensus 306 ~~~~~~~~~~v~~~~r~ 322 (332)
++..+..++.+++++|.
T Consensus 493 ~~~~~~~~~~~~~~~R~ 509 (517)
T PLN02687 493 LTLQRAVPLMVHPRPRL 509 (517)
T ss_pred eeeecCCCeEEeeccCC
Confidence 55566678999998884
No 11
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=2e-52 Score=402.96 Aligned_cols=267 Identities=29% Similarity=0.449 Sum_probs=223.4
Q ss_pred ccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccC---CCCCCCHHHH
Q 020029 45 LFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQES---EPEFYSDDVL 121 (332)
Q Consensus 45 ~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~---~~~~~~~~~i 121 (332)
.+|++++++. +..+.+.+..+.+.+++...++++++....... +....|+++.+++.... ++..++++++
T Consensus 245 ~~p~~~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i 317 (516)
T PLN02290 245 CFPGSRFFPS--KYNREIKSLKGEVERLLMEIIQSRRDCVEIGRS-----SSYGDDLLGMLLNEMEKKRSNGFNLNLQLI 317 (516)
T ss_pred cCchhhhCCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC-----CCCCCCHHHHHHHhccccCCCCCCCCHHHH
Confidence 3565555553 333556677788889999999888765432110 12356999999975331 2234789999
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcc
Q 020029 122 KSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRAEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLP 201 (332)
Q Consensus 122 ~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~ 201 (332)
.+++.++++||+|||+++++|++++|++||++|+|+++|++++++++ .++.+++.+|||++|||+|++|++|+++. ++
T Consensus 318 ~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~ 395 (516)
T PLN02290 318 MDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LP 395 (516)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cc
Confidence 99999999999999999999999999999999999999999999874 78999999999999999999999999997 68
Q ss_pred cccccceeecCeEeCCCCEEEechHHhhcCCCCC-CCCCCcCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHH
Q 020029 202 HFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERFEGIHSEREGFKHIPFGMGRRACPGAAMAIRTISF 280 (332)
Q Consensus 202 r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~ 280 (332)
|.+.+|++++|+.|||||.|.++.|++||||++| +||++|+||||++... .....++|||.|+|+|+|++||++|+++
T Consensus 396 R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~-~~~~~~~pFG~G~R~C~G~~lA~~el~l 474 (516)
T PLN02290 396 RMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF-APGRHFIPFAAGPRNCIGQAFAMMEAKI 474 (516)
T ss_pred eeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC-CCCCeEecCCCCCCCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999999 8999999999995421 2345799999999999999999999999
Q ss_pred HHHHHHHhcEeeecCCCCCcccccceeecCCCceEEEeecCC
Q 020029 281 ALGSLIQCFEWEKIGPEVDMTASYGLSLSKTVPLVAMCSPRQ 322 (332)
Q Consensus 281 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 322 (332)
+++.||++|++++.++. +.....++++.|+.++++++++|+
T Consensus 475 ~la~ll~~f~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~ 515 (516)
T PLN02290 475 ILAMLISKFSFTISDNY-RHAPVVVLTIKPKYGVQVCLKPLN 515 (516)
T ss_pred HHHHHHHhceEeeCCCc-ccCccceeeecCCCCCeEEEEeCC
Confidence 99999999999986542 222234577788899999999886
No 12
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=3e-52 Score=401.60 Aligned_cols=314 Identities=26% Similarity=0.489 Sum_probs=239.6
Q ss_pred ceeeecccccchhhcccchHHHHHHHHHHHHHhhhh-cccccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHHHH
Q 020029 2 MRIVAGKRGTEEVAGAANMEVAKKFLLEFKEIFFPS-MITNICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDI 80 (332)
Q Consensus 2 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (332)
++++||.++... ....+........... ....+.+++|.+.+... .+..++..+..+.+.+++..+++++
T Consensus 191 ~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~ 261 (519)
T PLN00168 191 VLMCFGERLDEP--------AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLF-RGRLQKALALRRRQKELFVPLIDAR 261 (519)
T ss_pred HHHHcCCCcChh--------hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhh-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888876321 1233333444332222 22334456675432211 1222455677888889999999888
Q ss_pred HHHHhhc-c-Ccccc-ccccchhHHHHHHhccc--CCCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHH
Q 020029 81 RIRLKKT-S-SSFET-ASVRNKSLIETLLSLQE--SEPEFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQ 155 (332)
Q Consensus 81 ~~~~~~~-~-~~~~~-~~~~~~dl~~~ll~~~~--~~~~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~ 155 (332)
++..... . +.... ......|+++.+++... +++..++++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~ 341 (519)
T PLN00168 262 REYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQS 341 (519)
T ss_pred HHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHH
Confidence 7653110 0 00000 00124689999997542 223469999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhCC-CCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhhcCCCC
Q 020029 156 KVRAEIDCNVANG-RMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKV 234 (332)
Q Consensus 156 ~l~~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~ 234 (332)
|+++||+.+++++ +.++.+++.+|||++|||+|++|++|+++..++|.+.+|++++|+.||||+.|.++.+++||||++
T Consensus 342 kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~ 421 (519)
T PLN00168 342 KLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDERE 421 (519)
T ss_pred HHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccc
Confidence 9999999999753 568999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCCCCCC-------CCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCC-Ccccccce
Q 020029 235 WEEPNKFKPERFEGIHS-------EREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEV-DMTASYGL 306 (332)
Q Consensus 235 ~~~p~~F~P~R~l~~~~-------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~ 306 (332)
||||++|+|+||++... ...+..++|||.|+|+|+|++||++|++++++.||++|+|++.++.. +.....++
T Consensus 422 ~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~ 501 (519)
T PLN00168 422 WERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREF 501 (519)
T ss_pred cCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhcee
Confidence 99999999999997421 11245799999999999999999999999999999999999865432 22223445
Q ss_pred eecCCCceEEEeecCCCc
Q 020029 307 SLSKTVPLVAMCSPRQDM 324 (332)
Q Consensus 307 ~~~~~~~~~v~~~~r~~~ 324 (332)
+..++.++.+++++|+.+
T Consensus 502 ~~~~~~~~~~~~~~R~~~ 519 (519)
T PLN00168 502 TTVMAKPLRARLVPRRTT 519 (519)
T ss_pred EEeecCCcEEEEEeccCC
Confidence 566677899999999753
No 13
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=4.4e-52 Score=399.48 Aligned_cols=225 Identities=34% Similarity=0.655 Sum_probs=199.6
Q ss_pred cchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhCCCCCChhhh
Q 020029 97 RNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRAEIDCNVANGRMLNDEDL 176 (332)
Q Consensus 97 ~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l 176 (332)
...|+++.+++.... +.++++++..++.++++||+|||+++++|++++|++||++|+++++|++.+++.+..++.+++
T Consensus 272 ~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l 349 (503)
T PLN02394 272 GLKCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDT 349 (503)
T ss_pred hhhhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHH
Confidence 356999999986432 358999999999999999999999999999999999999999999999999987677889999
Q ss_pred cCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCC----C
Q 020029 177 VNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHS----E 252 (332)
Q Consensus 177 ~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~----~ 252 (332)
.+|||++|||+|++|++|++|+..+|.+.+|++++|+.||+||.|.++.|++||||++|+||++|+||||++... .
T Consensus 350 ~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~ 429 (503)
T PLN02394 350 HKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEAN 429 (503)
T ss_pred hhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCccccc
Confidence 999999999999999999999988899999999999999999999999999999999999999999999996532 1
Q ss_pred CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCC--Ccccccc-eeecCCCceEEEeecCCC
Q 020029 253 REGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEV--DMTASYG-LSLSKTVPLVAMCSPRQD 323 (332)
Q Consensus 253 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~-~~~~~~~~~~v~~~~r~~ 323 (332)
.....++|||.|+|+|+|+.||++|+++++|.|+++|++++.++.. +....++ +....+.|+++++.||+.
T Consensus 430 ~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 503 (503)
T PLN02394 430 GNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRSA 503 (503)
T ss_pred CCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCCC
Confidence 2356899999999999999999999999999999999999866542 3344454 555466799999999963
No 14
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=4.6e-52 Score=398.91 Aligned_cols=304 Identities=29% Similarity=0.534 Sum_probs=234.8
Q ss_pred CceeeecccccchhhcccchHHHHHHHHHHHHHhhhhcccccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHHHH
Q 020029 1 MMRIVAGKRGTEEVAGAANMEVAKKFLLEFKEIFFPSMITNICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDI 80 (332)
Q Consensus 1 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (332)
|++++||.++... + +....+.+++...........+.+++|++.+++.+.++.+.+.+..+...+++...++++
T Consensus 182 i~~~~fG~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 255 (502)
T PLN02966 182 VCRQAFGKKYNED-----G-EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNET 255 (502)
T ss_pred HHHHHhCCccCcc-----c-hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567899887322 1 334567777766655544444456667544333213332334455566667777777665
Q ss_pred HHHHhhccCccccccccchhHHHHHHhcccCC--CCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHH
Q 020029 81 RIRLKKTSSSFETASVRNKSLIETLLSLQESE--PEFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVR 158 (332)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~--~~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~ 158 (332)
.+.. . . ..+..|+++.+++..+.+ +..++++++.+++.++++||+|||+++++|++++|++||++|+|++
T Consensus 256 ~~~~--~-~-----~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~ 327 (502)
T PLN02966 256 LDPK--R-V-----KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQ 327 (502)
T ss_pred Hhcc--c-c-----ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHH
Confidence 4321 1 0 123458999999754322 2358999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhCC--CCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhhcCCCCC-
Q 020029 159 AEIDCNVANG--RMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW- 235 (332)
Q Consensus 159 ~Ei~~~~~~~--~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~- 235 (332)
+|++++++.+ ..++++++.++||++|||+|++|++|++++.++|.+.+|++++|+.|||||.|.++.|++||||++|
T Consensus 328 ~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g 407 (502)
T PLN02966 328 AEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWG 407 (502)
T ss_pred HHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCccccc
Confidence 9999998742 4578999999999999999999999999997789999999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCC--CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCC----Ccccccceeec
Q 020029 236 EEPNKFKPERFEGIHSE--REGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEV----DMTASYGLSLS 309 (332)
Q Consensus 236 ~~p~~F~P~R~l~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~----~~~~~~~~~~~ 309 (332)
|||++|+||||++.... .....++|||+|+|+|+|++||++|++++++.||++|+++..++.. +.+...+++..
T Consensus 408 ~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~ 487 (502)
T PLN02966 408 PNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMH 487 (502)
T ss_pred CChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeec
Confidence 99999999999975421 2456899999999999999999999999999999999999876532 23445576665
Q ss_pred CCCceEEEe
Q 020029 310 KTVPLVAMC 318 (332)
Q Consensus 310 ~~~~~~v~~ 318 (332)
++.++.++.
T Consensus 488 ~~~~~~~~~ 496 (502)
T PLN02966 488 KSQHLKLVP 496 (502)
T ss_pred cCCCeEEEE
Confidence 555554433
No 15
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=7.5e-53 Score=398.11 Aligned_cols=303 Identities=33% Similarity=0.603 Sum_probs=244.3
Q ss_pred CceeeecccccchhhcccchHHHHHHHHHHHHHhhhhcc--cccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHH
Q 020029 1 MMRIVAGKRGTEEVAGAANMEVAKKFLLEFKEIFFPSMI--TNICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLID 78 (332)
Q Consensus 1 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 78 (332)
|++++||.++... .++...++.+.++.+...+.. ..+..++|++++++. ...+...++.+.+.+++..+++
T Consensus 153 i~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~ 225 (463)
T PF00067_consen 153 IGRVLFGKDFGSL-----DDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPT--PLFRRFKRARDRLRKYIKEIIE 225 (463)
T ss_dssp HHHHHHSSHHHGT-----THHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccceeeec-----cccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccc
Confidence 3567888876311 234456677777777665433 134456676666653 3446777788888899999999
Q ss_pred HHHHHHhhccCccccccccchhHHHHHHhcc-cCCC-CCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHH
Q 020029 79 DIRIRLKKTSSSFETASVRNKSLIETLLSLQ-ESEP-EFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQK 156 (332)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~-~~~~-~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~ 156 (332)
++++..... .....|+++.++... ..++ ..++++++...+..+++||++||+.+++|++++|++||++|++
T Consensus 226 ~~~~~~~~~-------~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~k 298 (463)
T PF00067_consen 226 ERREELDDG-------DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEK 298 (463)
T ss_dssp HHHHSHHSS-------SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred ccccccccc-------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 888775332 235779999999875 2333 3799999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEechHHhhcCCCCCC
Q 020029 157 VRAEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWE 236 (332)
Q Consensus 157 l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~ 236 (332)
+++|++.+.+++..++.+++.++|||+|||+|++|++|+++..++|.+.+|++++|+.||||+.|.++.+++|+||++|+
T Consensus 299 l~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~ 378 (463)
T PF00067_consen 299 LREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFP 378 (463)
T ss_dssp HHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999977778899999999999999999999999999667899999999999999999999999999999999999
Q ss_pred CCCCcCCCCCCCCCC--CCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCC-Cccccc-ceeecCCC
Q 020029 237 EPNKFKPERFEGIHS--EREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEV-DMTASY-GLSLSKTV 312 (332)
Q Consensus 237 ~p~~F~P~R~l~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~-~~~~~~~~ 312 (332)
||++|+|+||++... ......++|||.|+|.|+|++||++|++++++.||++||+++.++.. ...... +++. |+.
T Consensus 379 dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~ 457 (463)
T PF00067_consen 379 DPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLL-PPK 457 (463)
T ss_dssp STTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSE-EES
T ss_pred cccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEe-eCC
Confidence 999999999998765 35678999999999999999999999999999999999999865443 222222 3444 556
Q ss_pred ceEEEe
Q 020029 313 PLVAMC 318 (332)
Q Consensus 313 ~~~v~~ 318 (332)
++.|+|
T Consensus 458 ~~~~~~ 463 (463)
T PF00067_consen 458 PLKVKF 463 (463)
T ss_dssp SSEEEE
T ss_pred CcEEeC
Confidence 777764
No 16
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=7e-52 Score=396.09 Aligned_cols=303 Identities=24% Similarity=0.388 Sum_probs=231.6
Q ss_pred CceeeecccccchhhcccchHHHHHHHHHHHHHhhhhcccccCcccccccccccCccHHHHHHHHHHHHHHHHHHHHHHH
Q 020029 1 MMRIVAGKRGTEEVAGAANMEVAKKFLLEFKEIFFPSMITNICDLFPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDI 80 (332)
Q Consensus 1 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (332)
|++++||.....+ .....+....+.+.+.+++..+....+.++++++..+. ..+.+...+..+.+.+++...++++
T Consensus 178 i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~ 253 (482)
T PTZ00404 178 MFKYIFNEDISFD--EDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY--YQYLEHTDKNFKKIKKFIKEKYHEH 253 (482)
T ss_pred HHHHHhccccccc--cccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567889876321 00111234667777777776655444444444332211 1111233345566666666666554
Q ss_pred HHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHHH
Q 020029 81 RIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRAE 160 (332)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~E 160 (332)
++.. + .....|+++.+++..... .....+++++++..+++||+|||+++++|++++|++||++|+|+++|
T Consensus 254 ~~~~----~-----~~~~~dll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~E 323 (482)
T PTZ00404 254 LKTI----D-----PEVPRDLLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNE 323 (482)
T ss_pred HHcc----C-----CCCcccHHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 4331 0 123569999999764211 11233458899999999999999999999999999999999999999
Q ss_pred HhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceee-cCeEeCCCCEEEechHHhhcCCCCCCCCC
Q 020029 161 IDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIV-GGYHIPRGTTIMVNAWAMHRDSKVWEEPN 239 (332)
Q Consensus 161 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~ 239 (332)
++.+++++..++.+++.+|||++|||+|++|++|++|..++|.+.+|+++ +|+.||||+.|.++.+++||||++||||+
T Consensus 324 i~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~ 403 (482)
T PTZ00404 324 IKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPE 403 (482)
T ss_pred HHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCcc
Confidence 99999876778999999999999999999999999998678999999999 99999999999999999999999999999
Q ss_pred CcCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCC-CcccccceeecCCCceEEEe
Q 020029 240 KFKPERFEGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEV-DMTASYGLSLSKTVPLVAMC 318 (332)
Q Consensus 240 ~F~P~R~l~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~ 318 (332)
+|+||||++. ..+..++|||.|+|+|+|++||++|++++++.|+++|+++..+++. ......+++.. +.++.+.+
T Consensus 404 ~F~PeRwl~~---~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 479 (482)
T PTZ00404 404 QFDPSRFLNP---DSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLL 479 (482)
T ss_pred ccCccccCCC---CCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeee
Confidence 9999999964 2457899999999999999999999999999999999999765432 22234566665 46789988
Q ss_pred ecC
Q 020029 319 SPR 321 (332)
Q Consensus 319 ~~r 321 (332)
++|
T Consensus 480 ~~R 482 (482)
T PTZ00404 480 EKR 482 (482)
T ss_pred ecC
Confidence 876
No 17
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=9.8e-52 Score=395.63 Aligned_cols=253 Identities=23% Similarity=0.428 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCC---CCCCCHHHHHHHHHHHHhhchh
Q 020029 58 IEKIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESE---PEFYSDDVLKSVIVLMFIAGVE 134 (332)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~---~~~~~~~~i~~~~~~l~~ag~~ 134 (332)
..+++.+..+.+++++..+|+++++......+ . +....|+++.+++....+ +..++++++.+++.++++||+|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~--~--~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~d 315 (500)
T PLN02169 240 LERKMRTALATVNRMFAKIISSRRKEEISRAE--T--EPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRD 315 (500)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc--c--cCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchh
Confidence 34777889999999999999988764211100 0 112468999999753221 1247889999999999999999
Q ss_pred hHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeE
Q 020029 135 TTAVVLEWAMSLLLNNPDVLQKVRAEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYH 214 (332)
Q Consensus 135 tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ 214 (332)
||+++++|++++|+.||++|+|+++||+.++ +.+++.+|||++|||+|+||+||++|...++.+.+|+.++|+.
T Consensus 316 TTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~ 389 (500)
T PLN02169 316 TTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHK 389 (500)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEE
Confidence 9999999999999999999999999999764 5789999999999999999999999997544445555569999
Q ss_pred eCCCCEEEechHHhhcCCCCC-CCCCCcCCCCCCCCCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcE
Q 020029 215 IPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERFEGIHSE---REGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFE 290 (332)
Q Consensus 215 ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~---~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~ 290 (332)
||||+.|.+++|++||||++| +||++|+||||++..+. ..+.+|+|||+|+|+|+|++||++|++++++.||++|+
T Consensus 390 IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~ 469 (500)
T PLN02169 390 VDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYD 469 (500)
T ss_pred ECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCE
Confidence 999999999999999999999 89999999999975432 23678999999999999999999999999999999999
Q ss_pred eeecCCCCCcccccceeecCCCceEEEeecC
Q 020029 291 WEKIGPEVDMTASYGLSLSKTVPLVAMCSPR 321 (332)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 321 (332)
++..++. +.....++++.|+.++.+++++|
T Consensus 470 ~~~~~~~-~~~~~~~~~l~~~~gl~l~l~~~ 499 (500)
T PLN02169 470 FKVIEGH-KIEAIPSILLRMKHGLKVTVTKK 499 (500)
T ss_pred EEEcCCC-CcccccceEEecCCCEEEEEEeC
Confidence 9986543 33445567778889999999887
No 18
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=3.6e-51 Score=393.76 Aligned_cols=274 Identities=25% Similarity=0.461 Sum_probs=223.7
Q ss_pred Ccccc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCC-CCCHHH
Q 020029 43 CDLFP-ILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPE-FYSDDV 120 (332)
Q Consensus 43 ~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~-~~~~~~ 120 (332)
.+++| ++++++. .+..++.....+.+.+++..+++++++....... .....|+++.+++....++. .+++++
T Consensus 241 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~d~l~~ll~~~~~~~~~~ls~~~ 314 (534)
T PLN03018 241 VDYVERWLRGWNI-DGQEERAKVNVNLVRSYNNPIIDERVELWREKGG-----KAAVEDWLDTFITLKDQNGKYLVTPDE 314 (534)
T ss_pred HHHhhhhhhhhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-----CCCcccHHHHHHHhhcccCCCCCCHHH
Confidence 34455 4433222 2333455556677888889999888765322100 12346999999976433322 489999
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCc
Q 020029 121 LKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRAEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLL 200 (332)
Q Consensus 121 i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~ 200 (332)
+++++.++++||+|||+++++|++++|+.||++|+++++||+.+++.++.++.+++.++||++|||+|++|++|++|...
T Consensus 315 i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~ 394 (534)
T PLN03018 315 IKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVP 394 (534)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccC
Confidence 99999999999999999999999999999999999999999999987778899999999999999999999999999877
Q ss_pred ccccccceeecCeEeCCCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCCC-------CCCCcccccCCCCCCCccHHH
Q 020029 201 PHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSE-------REGFKHIPFGMGRRACPGAAM 273 (332)
Q Consensus 201 ~r~~~~d~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~-------~~~~~~~~Fg~G~r~C~G~~~ 273 (332)
+|.+.+|+.++|+.||||+.|.++.|++|+||++|+||++|+|+||++..+. .....++|||+|+|+|+|++|
T Consensus 395 ~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~l 474 (534)
T PLN03018 395 PHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKV 474 (534)
T ss_pred CcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHH
Confidence 8999999999999999999999999999999999999999999999964321 234689999999999999999
Q ss_pred HHHHHHHHHHHHHHhcEeeecCCCC--CcccccceeecCCCceEEEeecCCC
Q 020029 274 AIRTISFALGSLIQCFEWEKIGPEV--DMTASYGLSLSKTVPLVAMCSPRQD 323 (332)
Q Consensus 274 A~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~r~~ 323 (332)
|.+|++++++.|+++|++++.++.. +.....+.+.. +.++.+++++|.+
T Consensus 475 A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-p~~~~v~~~~R~~ 525 (534)
T PLN03018 475 GTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLLM-AKPLLLSVEPRLA 525 (534)
T ss_pred HHHHHHHHHHHHHHhceEEeCCCCCCCCccccccceec-CCCeEEEEEeccc
Confidence 9999999999999999999765431 23223354544 4699999999953
No 19
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-51 Score=393.00 Aligned_cols=288 Identities=30% Similarity=0.525 Sum_probs=232.3
Q ss_pred HHHHHHHHHHHhhhhcccccCcccc-cccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhH
Q 020029 23 AKKFLLEFKEIFFPSMITNICDLFP-ILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSL 101 (332)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl 101 (332)
..++.++++.....+..... .| ...++...+ ..+++.++.+.+++++.++|.++++.+.+..... .....|+
T Consensus 203 ~~~~~~a~~~~~~~~~~~~~---~p~~~~~~~~~~-~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~---~~~~~d~ 275 (497)
T KOG0157|consen 203 LFEYVQAFDDLTELISKRIN---LPLGTKFLYGLK-SERKLKKARKILHDFLEKIIRERREELEKEGSGE---EKKRLDF 275 (497)
T ss_pred ccHHHHHHHHHHHHHHHHHc---CchhhhHHhhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---cchhhhH
Confidence 34555566544444332111 13 333333212 4588999999999999999999998865432100 1456788
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhCCCC-CChhhhcCCh
Q 020029 102 IETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRAEIDCNVANGRM-LNDEDLVNLP 180 (332)
Q Consensus 102 ~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~l~~lp 180 (332)
++.+.... + ..+++++|.+.+.++++||+|||+++++|++++|+.||++|+++++|+..+++.+.. ......++|+
T Consensus 276 L~~~~~~~-~--~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~ 352 (497)
T KOG0157|consen 276 LDTLLLEE-D--KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMK 352 (497)
T ss_pred HHHHHHhc-c--CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhH
Confidence 88633221 1 579999999999999999999999999999999999999999999999999975333 2333333699
Q ss_pred hHHHHHHhhcCCCCCCccCcccccccceee-cCeEeCCCCEEEechHHhhcCCCCCC-CCCCcCCCCCCCCCC--CCCCC
Q 020029 181 YLCCVIKETLRLYPPAPLLLPHFSSENCIV-GGYHIPRGTTIMVNAWAMHRDSKVWE-EPNKFKPERFEGIHS--EREGF 256 (332)
Q Consensus 181 ~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~F~P~R~l~~~~--~~~~~ 256 (332)
|+++||+||||||||+|.. .|.+.+|+.+ +|+.||||+.|.++++++|||+++|+ ||++|||+||++... ..+++
T Consensus 353 yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~ 431 (497)
T KOG0157|consen 353 YLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPF 431 (497)
T ss_pred HHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCc
Confidence 9999999999999999996 7999999999 58999999999999999999999995 999999999996532 34578
Q ss_pred cccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCCCcccccceeecCCCceEEEeecCC
Q 020029 257 KHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEVDMTASYGLSLSKTVPLVAMCSPRQ 322 (332)
Q Consensus 257 ~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 322 (332)
+|+|||+|+|.|+|+.||++||+++++.||++|+|++..+.. ..+...+++.++.+++|++++|.
T Consensus 432 ~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-~~~~~~~~l~~~~gl~v~~~~r~ 496 (497)
T KOG0157|consen 432 AFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-PKPVPELTLRPKNGLKVKLRPRG 496 (497)
T ss_pred cccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-ceeeeEEEEEecCCeEEEEEeCC
Confidence 999999999999999999999999999999999999876542 56678888999999999999986
No 20
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=5.8e-51 Score=397.29 Aligned_cols=259 Identities=30% Similarity=0.505 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCc--cccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHH
Q 020029 60 KIYVRVQKMRDEFMQNLIDDIRIRLKKTSSS--FETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTA 137 (332)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~ 137 (332)
+++.+..+.+..++..+++.+++...+.... .+.......|+++.+++.. ..++++++.+++..+++||+|||+
T Consensus 333 ~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~----~~ls~~~L~~e~~~ll~AG~eTTA 408 (633)
T PLN02738 333 RKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG----DDVSSKQLRDDLMTMLIAGHETSA 408 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC----CCCCHHHHHHHHHHHHhcCCccHH
Confidence 4555566666777777776655432211100 0000123458999999742 358999999999999999999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCC
Q 020029 138 VVLEWAMSLLLNNPDVLQKVRAEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPR 217 (332)
Q Consensus 138 ~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~ 217 (332)
++|+|++++|++||++|+|+++|++.++++ ..++++++++||||+|||+|+||++|+++.. +|.+.+|..++|+.||+
T Consensus 409 ~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPk 486 (633)
T PLN02738 409 AVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIKR 486 (633)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEECC
Confidence 999999999999999999999999999884 6789999999999999999999999999995 58889999999999999
Q ss_pred CCEEEechHHhhcCCCCCCCCCCcCCCCCCCCC----CCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeee
Q 020029 218 GTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIH----SEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEK 293 (332)
Q Consensus 218 g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~ 293 (332)
||.|.++.|.+||||++||||++|+||||++.. .......++|||.|+|+|+|++||++|++++++.|+++|+|++
T Consensus 487 GT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el 566 (633)
T PLN02738 487 GEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQL 566 (633)
T ss_pred CCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEe
Confidence 999999999999999999999999999998432 1134568999999999999999999999999999999999998
Q ss_pred cCCCCCcccccceeecCCCceEEEeecCCCc
Q 020029 294 IGPEVDMTASYGLSLSKTVPLVAMCSPRQDM 324 (332)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~ 324 (332)
.++..+.....+.++.++.++.+++++|..+
T Consensus 567 ~~~~~~~~~~~~~~~~p~~~l~v~l~~R~~~ 597 (633)
T PLN02738 567 APGAPPVKMTTGATIHTTEGLKMTVTRRTKP 597 (633)
T ss_pred CCCCCCcccccceEEeeCCCcEEEEEECCCC
Confidence 7654333434456677788999999999754
No 21
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=4.3e-51 Score=393.57 Aligned_cols=258 Identities=25% Similarity=0.401 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHH
Q 020029 60 KIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVV 139 (332)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~ 139 (332)
+.+.+..+.+++++.+++++++++....... ......|+++.+++...+++..++++++.+++.++++||+|||+++
T Consensus 235 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~t 311 (516)
T PLN03195 235 ALLSKSIKVVDDFTYSVIRRRKAEMDEARKS---GKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATT 311 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHH
Confidence 4556777888888999998887654221000 0123568999999754333346899999999999999999999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHhhhhhC--------------------CCCCChhhhcCChhHHHHHHhhcCCCCCCccC
Q 020029 140 LEWAMSLLLNNPDVLQKVRAEIDCNVAN--------------------GRMLNDEDLVNLPYLCCVIKETLRLYPPAPLL 199 (332)
Q Consensus 140 l~~~l~~l~~~p~~~~~l~~Ei~~~~~~--------------------~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~ 199 (332)
++|++++|++||++|+|+++|++.+.++ +..++.+++.+|||++|||+|+||++|++|..
T Consensus 312 l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~ 391 (516)
T PLN03195 312 LSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD 391 (516)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch
Confidence 9999999999999999999999987643 24578999999999999999999999999997
Q ss_pred ccccccccee-ecCeEeCCCCEEEechHHhhcCCCCC-CCCCCcCCCCCCCCCC--CCCCCcccccCCCCCCCccHHHHH
Q 020029 200 LPHFSSENCI-VGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERFEGIHS--EREGFKHIPFGMGRRACPGAAMAI 275 (332)
Q Consensus 200 ~~r~~~~d~~-~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~ 275 (332)
. |.+.+|.. ++|+.||||+.|.++.|++||||++| +||++|+||||++... ...+..++|||+|+|+|+|++||+
T Consensus 392 ~-r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~ 470 (516)
T PLN03195 392 P-KGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAY 470 (516)
T ss_pred h-hhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHH
Confidence 5 54555544 59999999999999999999999999 9999999999996432 234567999999999999999999
Q ss_pred HHHHHHHHHHHHhcEeeecCCCCCcccccceeecCCCceEEEeecCC
Q 020029 276 RTISFALGSLIQCFEWEKIGPEVDMTASYGLSLSKTVPLVAMCSPRQ 322 (332)
Q Consensus 276 ~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 322 (332)
+|++++++.|+++|++++.++. +.......++.|+.++.|++++|.
T Consensus 471 ~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 471 LQMKMALALLCRFFKFQLVPGH-PVKYRMMTILSMANGLKVTVSRRS 516 (516)
T ss_pred HHHHHHHHHHHHhceeEecCCC-cceeeeeeEEecCCCEEEEEEeCC
Confidence 9999999999999999986543 333333455678889999999874
No 22
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=4.7e-50 Score=384.04 Aligned_cols=247 Identities=24% Similarity=0.379 Sum_probs=207.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHH
Q 020029 60 KIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVV 139 (332)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~ 139 (332)
++..+..+.+.+++.++++++++..++... .....|+++.+++. ..++++++.+++.++++||+|||+++
T Consensus 229 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~d~l~~ll~~-----~~ls~~~i~~~~~~ll~AG~dTta~t 298 (490)
T PLN02500 229 RKALKSRATILKFIERKMEERIEKLKEEDE-----SVEEDDLLGWVLKH-----SNLSTEQILDLILSLLFAGHETSSVA 298 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccC-----CCCcchHHHHHHhc-----cCCCHHHHHHHHHHHHHhhhhHHHHH
Confidence 445567788888899999888765432110 12346999999973 24899999999999999999999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHhhhhh-----CCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeE
Q 020029 140 LEWAMSLLLNNPDVLQKVRAEIDCNVA-----NGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYH 214 (332)
Q Consensus 140 l~~~l~~l~~~p~~~~~l~~Ei~~~~~-----~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ 214 (332)
++|++++|++||++|+|+++|++++++ ++..++.+++.+|||++|||+|++|++|++|.. +|.+.+|++++||.
T Consensus 299 l~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~ 377 (490)
T PLN02500 299 IALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYD 377 (490)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEE
Confidence 999999999999999999999998864 234578999999999999999999999999985 79999999999999
Q ss_pred eCCCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCCC--------CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHH
Q 020029 215 IPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSE--------REGFKHIPFGMGRRACPGAAMAIRTISFALGSLI 286 (332)
Q Consensus 215 ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~--------~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll 286 (332)
|||||.|.++.|++||||++|+||++|+||||++.... ..+..++|||+|+|+|+|++||++|++++++.||
T Consensus 378 IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll 457 (490)
T PLN02500 378 IPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLV 457 (490)
T ss_pred ECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999975321 1356899999999999999999999999999999
Q ss_pred HhcEeeecCCCCCcccccceeecCCCceEEEeec
Q 020029 287 QCFEWEKIGPEVDMTASYGLSLSKTVPLVAMCSP 320 (332)
Q Consensus 287 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 320 (332)
++|+|++.++.... . ...+ .++.++.+++++
T Consensus 458 ~~f~~~~~~~~~~~-~-~~~~-~~~~~l~~~~~~ 488 (490)
T PLN02500 458 LNFNWELAEADQAF-A-FPFV-DFPKGLPIRVRR 488 (490)
T ss_pred hccEEEEcCCCcce-e-cccc-cCCCCceEEEEe
Confidence 99999986654221 1 1222 334688888764
No 23
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=3.5e-50 Score=384.70 Aligned_cols=248 Identities=25% Similarity=0.397 Sum_probs=213.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHH
Q 020029 59 EKIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAV 138 (332)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~ 138 (332)
.+++.+..+.+++++.++|+++++. . .....|+++.+++.. .+++++.+++.++++||+|||++
T Consensus 248 ~~~~~~~~~~~~~~~~~~I~~r~~~---~-------~~~~~dll~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~ 311 (502)
T PLN02426 248 ERKLKEAIKLVDELAAEVIRQRRKL---G-------FSASKDLLSRFMASI------NDDKYLRDIVVSFLLAGRDTVAS 311 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc---c-------cCCcchHHHHHHhcC------CCHHHHHHHHHHHHHhccchHHH
Confidence 4667788888899999998887653 1 123469999999743 26789999999999999999999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHhhhhhCC-CCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceee-cCeEeC
Q 020029 139 VLEWAMSLLLNNPDVLQKVRAEIDCNVANG-RMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIV-GGYHIP 216 (332)
Q Consensus 139 ~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip 216 (332)
+++|++++|++||++|+++++|++.+.+.+ ..++.+++.+|||++|||+|+||++|++|.. .|.+.+|.++ +|+.||
T Consensus 312 ~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip 390 (502)
T PLN02426 312 ALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVA 390 (502)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEEC
Confidence 999999999999999999999999988753 3679999999999999999999999999986 5888887776 999999
Q ss_pred CCCEEEechHHhhcCCCCC-CCCCCcCCCCCCCCCC--CCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeee
Q 020029 217 RGTTIMVNAWAMHRDSKVW-EEPNKFKPERFEGIHS--EREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEK 293 (332)
Q Consensus 217 ~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~ 293 (332)
+||.|.++.|++||||++| +||++|+||||++... ...+..++|||+|+|.|+|+++|++|++++++.|+++|+++.
T Consensus 391 ~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~ 470 (502)
T PLN02426 391 KGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEV 470 (502)
T ss_pred CCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEE
Confidence 9999999999999999999 9999999999997432 134567999999999999999999999999999999999998
Q ss_pred cCCCC-CcccccceeecCCCceEEEeecCCC
Q 020029 294 IGPEV-DMTASYGLSLSKTVPLVAMCSPRQD 323 (332)
Q Consensus 294 ~~~~~-~~~~~~~~~~~~~~~~~v~~~~r~~ 323 (332)
.++.. ......++++.|+.++.|++++|..
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~~ 501 (502)
T PLN02426 471 VGRSNRAPRFAPGLTATVRGGLPVRVRERVR 501 (502)
T ss_pred ecCCCCCCcccceeEEecCCCEEEEEEEccC
Confidence 64322 2344456778888999999999864
No 24
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=8.3e-49 Score=374.96 Aligned_cols=260 Identities=30% Similarity=0.497 Sum_probs=217.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccc---ccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhH
Q 020029 60 KIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFET---ASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETT 136 (332)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt 136 (332)
++..+..+.+.+++.++++++++.+.......+. ......|+++.++... ..+++++|.+++..+++||+|||
T Consensus 219 ~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~i~~~~~~~~~aG~dTt 294 (489)
T PLN02936 219 IKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASR----EEVSSVQLRDDLLSMLVAGHETT 294 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCchHHHHHHHhcc----ccCCHHHHHHHHHHHHHHhHHHH
Confidence 5666788888889999998877654321110000 0123468999999643 24889999999999999999999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeC
Q 020029 137 AVVLEWAMSLLLNNPDVLQKVRAEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIP 216 (332)
Q Consensus 137 ~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip 216 (332)
+++++|++++|++||++|+++++|++.+++. ..++.+++.+|||++|||+||+|++|+++...+|.+.+|+.++|+.||
T Consensus 295 a~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip 373 (489)
T PLN02936 295 GSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVN 373 (489)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEEC
Confidence 9999999999999999999999999999875 457899999999999999999999999999888877888888999999
Q ss_pred CCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCC----CCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEee
Q 020029 217 RGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHS----EREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE 292 (332)
Q Consensus 217 ~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~ 292 (332)
+|+.|.++.+++||||++|+||++|+|+||++... ...+..++|||.|+|+|+|++||++|++++++.|+++|+++
T Consensus 374 ~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~ 453 (489)
T PLN02936 374 AGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLE 453 (489)
T ss_pred CCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEE
Confidence 99999999999999999999999999999996432 12245899999999999999999999999999999999999
Q ss_pred ecCCCCCcccccceeecCCCceEEEeecCCCcc
Q 020029 293 KIGPEVDMTASYGLSLSKTVPLVAMCSPRQDMI 325 (332)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~~ 325 (332)
+.+++ +.....+++..|+.+++|++++|...-
T Consensus 454 ~~~~~-~~~~~~~~~~~~~~~~~v~~~~R~~~~ 485 (489)
T PLN02936 454 LVPDQ-DIVMTTGATIHTTNGLYMTVSRRRVPD 485 (489)
T ss_pred ecCCC-ccceecceEEeeCCCeEEEEEeeeCCC
Confidence 87654 222233455667789999999997653
No 25
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=2.4e-48 Score=368.71 Aligned_cols=251 Identities=23% Similarity=0.346 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHH
Q 020029 60 KIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVV 139 (332)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~ 139 (332)
++..+..+.+.+++..++++++.......+ .. .....|+++.+++.. +..++++++..++..+++||+|||+++
T Consensus 197 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~-~~--~~~~~d~l~~ll~~~---~~~l~~~~i~~~~~~ll~Ag~dTts~t 270 (452)
T PLN03141 197 YRSLQAKKRMVKLVKKIIEEKRRAMKNKEE-DE--TGIPKDVVDVLLRDG---SDELTDDLISDNMIDMMIPGEDSVPVL 270 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc--cCChhhHHHHHHhcC---CCCCCHHHHHHHHHHHHHhcchhHHHH
Confidence 344567888999999999888765422100 00 112469999999753 245899999999999999999999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHhhhhh----CCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEe
Q 020029 140 LEWAMSLLLNNPDVLQKVRAEIDCNVA----NGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHI 215 (332)
Q Consensus 140 l~~~l~~l~~~p~~~~~l~~Ei~~~~~----~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~i 215 (332)
++|++++|++||++|+++++|++.+.+ .+..++.+++.++||++|||+|++|++|+++. ++|.+.+|++++||.|
T Consensus 271 l~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~I 349 (452)
T PLN03141 271 MTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLI 349 (452)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEE
Confidence 999999999999999999999988763 24457889999999999999999999999986 5899999999999999
Q ss_pred CCCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecC
Q 020029 216 PRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIG 295 (332)
Q Consensus 216 p~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~ 295 (332)
|||+.|.++.+++|+|+++|+||++|+||||++... .+..++|||+|+|+|+|++||.+|++++++.|+++|+++..+
T Consensus 350 PkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~--~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~ 427 (452)
T PLN03141 350 PKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM--NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEE 427 (452)
T ss_pred CCCCEEEEehHhccCCchhcCCccccCcccccCCCC--CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCC
Confidence 999999999999999999999999999999997532 467899999999999999999999999999999999998765
Q ss_pred CCCCcccccceeecCCCceEEEeecCCC
Q 020029 296 PEVDMTASYGLSLSKTVPLVAMCSPRQD 323 (332)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~v~~~~r~~ 323 (332)
+. .. ...++.|..++.|.+++|.+
T Consensus 428 ~~--~~--~~~~~~~~~~~~~~~~~~~~ 451 (452)
T PLN03141 428 DT--IV--NFPTVRMKRKLPIWVTRIDD 451 (452)
T ss_pred CC--ee--ecccccCCCCceEEEEeCCC
Confidence 42 11 22466788899999999953
No 26
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=1.8e-48 Score=370.51 Aligned_cols=244 Identities=23% Similarity=0.327 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHH
Q 020029 60 KIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVV 139 (332)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~ 139 (332)
++..+.++.+.+++.+.++++++. .....|+++.+++... ++..+++++|.+++.++++||+|||+++
T Consensus 216 ~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~~~d~l~~ll~~~~-~~~~~s~~ei~~~~~~ll~Ag~dTt~~~ 283 (463)
T PLN02774 216 RSGVQARKNIVRMLRQLIQERRAS-----------GETHTDMLGYLMRKEG-NRYKLTDEEIIDQIITILYSGYETVSTT 283 (463)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhc-----------CCCcccHHHHHHhCcc-CCCCCCHHHHHHHHHHHHHhcchhHHHH
Confidence 455567788888888888776543 1234699999997432 2235899999999999999999999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHhhhhhC---CCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeC
Q 020029 140 LEWAMSLLLNNPDVLQKVRAEIDCNVAN---GRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIP 216 (332)
Q Consensus 140 l~~~l~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip 216 (332)
++|++++|++||++|+++++|++.+.+. +..++.+++.++||++|||+|++|++|+++.. +|.+.+|++++|+.||
T Consensus 284 l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~Ip 362 (463)
T PLN02774 284 SMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIP 362 (463)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEEC
Confidence 9999999999999999999999999863 35678999999999999999999999999874 6999999999999999
Q ss_pred CCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCC
Q 020029 217 RGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGP 296 (332)
Q Consensus 217 ~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~ 296 (332)
||+.|+++.+++|+||++|+||++|+||||++.... ....++|||+|+|+|+|++||++|++++++.||++|++++.++
T Consensus 363 kGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~ 441 (463)
T PLN02774 363 KGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGG 441 (463)
T ss_pred CCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCC
Confidence 999999999999999999999999999999965421 2246999999999999999999999999999999999998765
Q ss_pred CCCcccccceeecCCCceEEEeec
Q 020029 297 EVDMTASYGLSLSKTVPLVAMCSP 320 (332)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~v~~~~ 320 (332)
.. ..... ++.|+.++.|+++|
T Consensus 442 ~~-~~~~~--~~~p~~g~~~~~~~ 462 (463)
T PLN02774 442 DK-LMKFP--RVEAPNGLHIRVSP 462 (463)
T ss_pred Cc-cccCC--CCCCCCCceEEeee
Confidence 42 22211 23467888888874
No 27
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=3.1e-47 Score=361.72 Aligned_cols=249 Identities=22% Similarity=0.363 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHH
Q 020029 59 EKIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAV 138 (332)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~ 138 (332)
.++..+.++++.+++.++++++++..... .....|+++.+++.. ..++++++.+++..+++||+|||++
T Consensus 217 ~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-------~~~~~d~l~~ll~~~----~~~~~~ei~~~~~~l~~Ag~~tta~ 285 (472)
T PLN02987 217 YRRAIQARTKVAEALTLVVMKRRKEEEEG-------AEKKKDMLAALLASD----DGFSDEEIVDFLVALLVAGYETTST 285 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcc-------CcccccHHHHHHhcC----CCCCHHHHHHHHHHHHHhccchHHH
Confidence 36677888999999999999887653211 123569999999753 2589999999999999999999999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHhhhhh---CCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEe
Q 020029 139 VLEWAMSLLLNNPDVLQKVRAEIDCNVA---NGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHI 215 (332)
Q Consensus 139 ~l~~~l~~l~~~p~~~~~l~~Ei~~~~~---~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~i 215 (332)
+++|++++|++||++|+++++|++.+.+ .+..++.+++.++||++||++|++|++|+++. ++|.+.+|++++|+.|
T Consensus 286 ~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~i 364 (472)
T PLN02987 286 IMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTI 364 (472)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEE
Confidence 9999999999999999999999998875 23557889999999999999999999999986 4799999999999999
Q ss_pred CCCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCCC-CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeec
Q 020029 216 PRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSE-REGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI 294 (332)
Q Consensus 216 p~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~ 294 (332)
|+|+.|.++.+++|+||++|+||++|+|+||++.... .....++|||+|+|.|+|++||.+|++++++.|+++|++++.
T Consensus 365 p~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~ 444 (472)
T PLN02987 365 PKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPA 444 (472)
T ss_pred CCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEEC
Confidence 9999999999999999999999999999999975422 234689999999999999999999999999999999999986
Q ss_pred CCCCCcccccceeecCCCceEEEeecCC
Q 020029 295 GPEVDMTASYGLSLSKTVPLVAMCSPRQ 322 (332)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 322 (332)
++. +. .+..++.|..++.+++++|.
T Consensus 445 ~~~-~~--~~~~~~~p~~~~~~~~~~r~ 469 (472)
T PLN02987 445 EQD-KL--VFFPTTRTQKRYPINVKRRD 469 (472)
T ss_pred CCC-ce--eecccccCCCCceEEEEecc
Confidence 543 22 23446778889999999883
No 28
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=7.5e-47 Score=362.26 Aligned_cols=253 Identities=25% Similarity=0.427 Sum_probs=213.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHH
Q 020029 60 KIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVV 139 (332)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~ 139 (332)
++..+..+.+.+++.+.++++++...... .....|+++.+++...+++..++++++.+.+..+++||+|||+++
T Consensus 233 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~------~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~ 306 (490)
T PLN02302 233 HRALKARKKLVALFQSIVDERRNSRKQNI------SPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHL 306 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccC------CCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHH
Confidence 34445667788888888888765532110 124579999999864434446899999999999999999999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHhhhhhCC----CCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEe
Q 020029 140 LEWAMSLLLNNPDVLQKVRAEIDCNVANG----RMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHI 215 (332)
Q Consensus 140 l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~i 215 (332)
++|++++|++||++|+++++|++.+++.. ..++.+++.++||++|||+|++|++|+++.. +|.+.+|+.++|+.|
T Consensus 307 l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~I 385 (490)
T PLN02302 307 TMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTI 385 (490)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEE
Confidence 99999999999999999999999998642 2378999999999999999999999999885 689999999999999
Q ss_pred CCCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecC
Q 020029 216 PRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIG 295 (332)
Q Consensus 216 p~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~ 295 (332)
|||+.|.++.+++||||++|+||++|+|+||++.. ..+..++|||+|+|+|+|++||.+|++++++.|+++|++++.+
T Consensus 386 p~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~--~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~ 463 (490)
T PLN02302 386 PKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT--PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLN 463 (490)
T ss_pred CCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC--CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcC
Confidence 99999999999999999999999999999999643 2456899999999999999999999999999999999999875
Q ss_pred CCCCcccccceeecCCCceEEEeecCCC
Q 020029 296 PEVDMTASYGLSLSKTVPLVAMCSPRQD 323 (332)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~v~~~~r~~ 323 (332)
+..++. ......|..++.+++++|..
T Consensus 464 ~~~~~~--~~~~~~p~~~~~~~~~~~~~ 489 (490)
T PLN02302 464 PGCKVM--YLPHPRPKDNCLARITKVAS 489 (490)
T ss_pred CCCcce--eCCCCCCCCCceEEEEeccC
Confidence 432333 22235677899999988864
No 29
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=1.7e-46 Score=356.91 Aligned_cols=240 Identities=26% Similarity=0.420 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHH
Q 020029 60 KIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVV 139 (332)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~ 139 (332)
++..++.+.+.+++.++++++++. .....|+++.+++. +..++++++.+++..+++||+|||+++
T Consensus 219 ~~~~~a~~~~~~~~~~~i~~~~~~-----------~~~~~d~l~~ll~~----~~~l~~~ei~~~~~~~~~Ag~dTta~~ 283 (463)
T PLN02196 219 HKSMKARKELAQILAKILSKRRQN-----------GSSHNDLLGSFMGD----KEGLTDEQIADNIIGVIFAARDTTASV 283 (463)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhc-----------CCCcccHHHHHHhc----CCCCCHHHHHHHHHHHHHhhhHHHHHH
Confidence 455577778888888888766543 12346899998853 235899999999999999999999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHhhhhhC---CCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeC
Q 020029 140 LEWAMSLLLNNPDVLQKVRAEIDCNVAN---GRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIP 216 (332)
Q Consensus 140 l~~~l~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip 216 (332)
++|++++|++||++|+++++|++.+.+. +..++.+++.++||++|||+|++|++|++++. .|.+.+|+.++|+.||
T Consensus 284 l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~Ip 362 (463)
T PLN02196 284 LTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIP 362 (463)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeC
Confidence 9999999999999999999999988763 35688999999999999999999999999996 5899999999999999
Q ss_pred CCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCC
Q 020029 217 RGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGP 296 (332)
Q Consensus 217 ~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~ 296 (332)
||+.|+++.+++|+||++|+||++|+||||++.. .+..++|||.|+|.|+|+++|++|++++++.|+++|++++.++
T Consensus 363 kGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~ 439 (463)
T PLN02196 363 KGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP---KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGT 439 (463)
T ss_pred CCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC---CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCC
Confidence 9999999999999999999999999999999632 4578999999999999999999999999999999999998764
Q ss_pred CCCcccccceeecCCCceEEEeec
Q 020029 297 EVDMTASYGLSLSKTVPLVAMCSP 320 (332)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~v~~~~ 320 (332)
+.+. .+..+..|+.++.|+++.
T Consensus 440 ~~~~--~~~~~~~p~~~~~~~~~~ 461 (463)
T PLN02196 440 SNGI--QYGPFALPQNGLPIALSR 461 (463)
T ss_pred CCce--EEcccccCCCCceEEEec
Confidence 3233 334344577888888764
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-46 Score=334.84 Aligned_cols=260 Identities=26% Similarity=0.465 Sum_probs=223.0
Q ss_pred cccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHH
Q 020029 46 FPILRLIGYSKGIEKIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVI 125 (332)
Q Consensus 46 ~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~ 125 (332)
||. ++|+ ... ++..++++.+.+++..++.++++.. +....|++..+++ ...++...++++++...
T Consensus 214 FP~--~LP~-~~~-r~~~ra~~~i~k~f~~~i~~rr~s~----------s~~~~dmlq~l~~-~y~dg~~~te~e~a~~l 278 (486)
T KOG0684|consen 214 FPY--NLPI-PLL-RRRDRARKKISKIFSKIILDRRASI----------SKWDNDMLQSLME-KYKDGRPTTEEEIAGLL 278 (486)
T ss_pred ccc--CCCc-chh-hhHHHHHHHHHHHHHHHHHHHHhcc----------ccccHHHHHHHHH-HhhcCCcCcHHHHHHHH
Confidence 664 5665 444 5566889999999999888887763 2345588888888 33345678999999999
Q ss_pred HHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHHHHhhhhhCCCC-CChhhhcCChhHHHHHHhhcCCCCCCccCccccc
Q 020029 126 VLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRAEIDCNVANGRM-LNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFS 204 (332)
Q Consensus 126 ~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~ 204 (332)
+.+++||+.|++.+..|++++|++||++++.+++|+..++|++.. ++.+.++++|.|++||+||+||+||.+.. .|.+
T Consensus 279 i~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~-~R~v 357 (486)
T KOG0684|consen 279 IGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSL-MRKV 357 (486)
T ss_pred HHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhH-HHhh
Confidence 999999999999999999999999999999999999999988655 89999999999999999999999998775 5999
Q ss_pred ccceeecC----eEeCCCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCCC------CCCCcccccCCCCCCCccHHHH
Q 020029 205 SENCIVGG----YHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSE------REGFKHIPFGMGRRACPGAAMA 274 (332)
Q Consensus 205 ~~d~~~~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~------~~~~~~~~Fg~G~r~C~G~~~A 274 (332)
.+|.++.+ |.||+|.+|.++..-+|+||++|+||+.|+|+||++..+. .-.+.+||||+|.|.|||++||
T Consensus 358 ~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA 437 (486)
T KOG0684|consen 358 HEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFA 437 (486)
T ss_pred ccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHH
Confidence 99999865 9999999999999999999999999999999999965532 2245679999999999999999
Q ss_pred HHHHHHHHHHHHHhcEeeecCCCC-CcccccceeecCCCceEEEeecCC
Q 020029 275 IRTISFALGSLIQCFEWEKIGPEV-DMTASYGLSLSKTVPLVAMCSPRQ 322 (332)
Q Consensus 275 ~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~r~ 322 (332)
.+|++.++..+|+.||+++++++. +.+++ .++..|..++.|+++.|.
T Consensus 438 ~~eIk~~~~l~L~~fdleLid~~~P~~d~s-~~v~~P~g~v~irYK~R~ 485 (486)
T KOG0684|consen 438 YLEIKQFISLLLRHFDLELIDGPFPEVDYS-RMVMQPEGDVRIRYKRRP 485 (486)
T ss_pred HHHHHHHHHHHHHHcceeecCCCCCCCCHH-HhhcCCCCCceEEEeecC
Confidence 999999999999999999998532 44443 336678999999999885
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.7e-42 Score=320.05 Aligned_cols=222 Identities=35% Similarity=0.566 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhchhhHHHH
Q 020029 60 KIYVRVQKMRDEFMQNLIDDIRIRLKKTSSSFETASVRNKSLIETLLSLQESEPEFYSDDVLKSVIVLMFIAGVETTAVV 139 (332)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~dl~~~ll~~~~~~~~~~~~~~i~~~~~~l~~ag~~tt~~~ 139 (332)
.+..+....+.+++..+|++++. ....|+++.++....+++..+++++|.++++++++||+|||+++
T Consensus 189 ~~~~~a~~~~~~~~~~li~~rR~-------------~~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~ 255 (411)
T COG2124 189 RRARAARRELDAYLRALIAERRA-------------APRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANA 255 (411)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-------------CCcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHH
Confidence 56678888889999999988862 24568999999875544446999999999999999999999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHhhhhhCCCCCChhhhcCChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCC
Q 020029 140 LEWAMSLLLNNPDVLQKVRAEIDCNVANGRMLNDEDLVNLPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGT 219 (332)
Q Consensus 140 l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~ 219 (332)
++|+++.|++||+.++++++|.+. ||++++|+|++|++||++. .+|.+.+|++++|+.||||+
T Consensus 256 l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~ 318 (411)
T COG2124 256 LAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGT 318 (411)
T ss_pred HHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCC
Confidence 999999999999999999997663 8999999999999999999 78999999999999999999
Q ss_pred EEEechHHhhcCCCCCCCCCCcCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhcEeeecCCCCC
Q 020029 220 TIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGPEVD 299 (332)
Q Consensus 220 ~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~ 299 (332)
.|+++++++||||++|+||++|||+||. ..++|||+|+|.|+|+.||++|++++++.+|++|++....+ .
T Consensus 319 ~V~~~~~~anrDp~~f~~P~~F~p~R~~--------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~- 388 (411)
T COG2124 319 VVLLSIGAANRDPEVFPDPDEFDPERFN--------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-P- 388 (411)
T ss_pred EEEecHhhhcCChhhCCChhhcCCCCCC--------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-
Confidence 9999999999999999999999999986 58999999999999999999999999999999999887654 1
Q ss_pred cccccceeecCCCceEEEeecC
Q 020029 300 MTASYGLSLSKTVPLVAMCSPR 321 (332)
Q Consensus 300 ~~~~~~~~~~~~~~~~v~~~~r 321 (332)
.......+..+..+..+.++.+
T Consensus 389 ~~~~~~~~~~~~g~~~l~v~~~ 410 (411)
T COG2124 389 PPLVRRPTLVPRGGERLPVRRR 410 (411)
T ss_pred CCccccccccCCCcceeeeecC
Confidence 1123344455666777777654
No 32
>PLN02648 allene oxide synthase
Probab=100.00 E-value=1.7e-37 Score=293.89 Aligned_cols=181 Identities=18% Similarity=0.337 Sum_probs=157.0
Q ss_pred CCCHHHHHHHHHH-HHhhchhhHHHHHHHHHHHHhhCHH-HHHHHHHHHhhhhhC-CCCCChhhhcCChhHHHHHHhhcC
Q 020029 115 FYSDDVLKSVIVL-MFIAGVETTAVVLEWAMSLLLNNPD-VLQKVRAEIDCNVAN-GRMLNDEDLVNLPYLCCVIKETLR 191 (332)
Q Consensus 115 ~~~~~~i~~~~~~-l~~ag~~tt~~~l~~~l~~l~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lR 191 (332)
.++++++.++++. +.+++++|++++++|++++|+.||+ +++++++|++.+++. +..++.+++.+|||+++||+|++|
T Consensus 266 ~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLR 345 (480)
T PLN02648 266 GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALR 345 (480)
T ss_pred CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHh
Confidence 4999999998875 4466777888899999999999995 999999999999863 456899999999999999999999
Q ss_pred CCCCCccCcccccccceeec----CeEeCCCCEEEechHHhhcCCCCCCCCCCcCCCCCCCCCCCCCCCccccc------
Q 020029 192 LYPPAPLLLPHFSSENCIVG----GYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREGFKHIPF------ 261 (332)
Q Consensus 192 l~p~~~~~~~r~~~~d~~~~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~F------ 261 (332)
++|++++. .|.+.+|++++ |+.||||+.|+++.+.+|+||++|+||++|+|+||++.... ....+++|
T Consensus 346 l~p~v~~~-~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~-~~~~~~~f~~g~~~ 423 (480)
T PLN02648 346 IEPPVPFQ-YGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE-KLLKYVFWSNGRET 423 (480)
T ss_pred hcCCcccc-cceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc-ccccccccCCCccc
Confidence 99999986 47788999995 79999999999999999999999999999999999864321 12234444
Q ss_pred ---CCCCCCCccHHHHHHHHHHHHHHHHHhcE-eeecCCC
Q 020029 262 ---GMGRRACPGAAMAIRTISFALGSLIQCFE-WEKIGPE 297 (332)
Q Consensus 262 ---g~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~ 297 (332)
|+|+|.|+|+.||++|++++++.|+++|+ |++.++.
T Consensus 424 ~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~ 463 (480)
T PLN02648 424 ESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT 463 (480)
T ss_pred CCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence 67789999999999999999999999998 9876554
No 33
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=40.39 E-value=22 Score=23.37 Aligned_cols=8 Identities=38% Similarity=0.563 Sum_probs=6.5
Q ss_pred CCCCCCCC
Q 020029 242 KPERFEGI 249 (332)
Q Consensus 242 ~P~R~l~~ 249 (332)
||||||.-
T Consensus 44 DPERWLP~ 51 (59)
T PF08492_consen 44 DPERWLPK 51 (59)
T ss_pred CccccCch
Confidence 79999963
No 34
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=34.27 E-value=49 Score=21.53 Aligned_cols=19 Identities=32% Similarity=0.641 Sum_probs=16.5
Q ss_pred HHHHHHHhhCHHHHHHHHH
Q 020029 141 EWAMSLLLNNPDVLQKVRA 159 (332)
Q Consensus 141 ~~~l~~l~~~p~~~~~l~~ 159 (332)
...+.+|.+||++.+++.+
T Consensus 3 Q~iV~YLv~nPevl~kl~~ 21 (57)
T PF05952_consen 3 QEIVNYLVQNPEVLEKLKE 21 (57)
T ss_pred HHHHHHHHHChHHHHHHHc
Confidence 4567899999999999987
No 35
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=30.64 E-value=40 Score=26.24 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=17.2
Q ss_pred CCCccHHHHHHHHHHHHHHHHHh
Q 020029 266 RACPGAAMAIRTISFALGSLIQC 288 (332)
Q Consensus 266 r~C~G~~~A~~~~~~~l~~ll~~ 288 (332)
-+|.|+.||..++-.++..++..
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS
T ss_pred ecccchHHHHHHHHHHHHHHhcC
Confidence 47999999999999999999975
No 36
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=30.33 E-value=43 Score=28.06 Aligned_cols=43 Identities=21% Similarity=0.229 Sum_probs=30.2
Q ss_pred ChhHHHHHHhhcCCCCCCccCcccccccceeecCeEeCCCCEEEe
Q 020029 179 LPYLCCVIKETLRLYPPAPLLLPHFSSENCIVGGYHIPRGTTIMV 223 (332)
Q Consensus 179 lp~l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~g~~v~~ 223 (332)
-..+.|||.|+.-+....-.. =...+|+.++|..||||+.++.
T Consensus 52 ~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence 345678999987765433221 2237889999999999997755
No 37
>PRK06789 flagellar motor switch protein; Validated
Probab=29.28 E-value=67 Score=22.17 Aligned_cols=41 Identities=15% Similarity=0.184 Sum_probs=31.6
Q ss_pred HHHhhcCCCCCCccCcccccccc--eeecCeEeCCCCEEEech
Q 020029 185 VIKETLRLYPPAPLLLPHFSSEN--CIVGGYHIPRGTTIMVNA 225 (332)
Q Consensus 185 ~i~E~lRl~p~~~~~~~r~~~~d--~~~~g~~ip~g~~v~~~~ 225 (332)
-++|-+.+.+.....+-+.+.+. +.++|..|.+|..|.++-
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~ 63 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG 63 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence 47888889888777777777555 445899999999987753
No 38
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=28.58 E-value=26 Score=22.41 Aligned_cols=11 Identities=45% Similarity=0.981 Sum_probs=9.0
Q ss_pred cccCCCCCCCc
Q 020029 259 IPFGMGRRACP 269 (332)
Q Consensus 259 ~~Fg~G~r~C~ 269 (332)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 36999999985
No 39
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=28.32 E-value=2.2e+02 Score=20.09 Aligned_cols=50 Identities=12% Similarity=0.078 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHhhCHHHHHHHHHHHhhhh
Q 020029 116 YSDDVLKSVIVLMFIAGVETTAVVLEWAMSLLLNNPDVLQKVRAEIDCNV 165 (332)
Q Consensus 116 ~~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~ 165 (332)
.+...........++--+..++..+.-.+.+.++||+...++.+.+..-+
T Consensus 29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL 78 (87)
T PF14129_consen 29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL 78 (87)
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 34455556667777888999999999999999999999999988877654
No 40
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=26.01 E-value=94 Score=22.41 Aligned_cols=28 Identities=14% Similarity=0.324 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHhhh
Q 020029 137 AVVLEWAMSLLLNNPDVLQKVRAEIDCN 164 (332)
Q Consensus 137 ~~~l~~~l~~l~~~p~~~~~l~~Ei~~~ 164 (332)
..++.|.++..-.+|+..+.+++||+++
T Consensus 53 l~~lgy~v~tFnDcpeA~~eL~~eI~eA 80 (91)
T PF08285_consen 53 LFTLGYGVATFNDCPEAAKELQKEIKEA 80 (91)
T ss_pred HHHHHHhhhccCCCHHHHHHHHHHHHHH
Confidence 4567899999999999999999999987
Done!