BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020032
(332 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224108097|ref|XP_002314719.1| predicted protein [Populus trichocarpa]
gi|222863759|gb|EEF00890.1| predicted protein [Populus trichocarpa]
Length = 418
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 166/342 (48%), Positives = 212/342 (61%), Gaps = 22/342 (6%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT C HEYHLQCILEWSQRSKECPICWQ VLK+ A QELLAA+E+ERL +SR A+
Sbjct: 60 VTCCNHEYHLQCILEWSQRSKECPICWQLLVLKDHASQELLAAVETERLLRSRNSTPASM 119
Query: 68 VT--FPEDFDNGPDGTYFDYDDMEARIMQHLAAARY-----FRRREMQRYPALDASQVVD 120
+ +D+D D D D E IMQHLAAA RE QR L SQV+
Sbjct: 120 IVPHLDDDYDIEQDSYSDDSDFDE-HIMQHLAAAASSRAHHVHERERQRSNGLGPSQVIA 178
Query: 121 SSS---AATASLMLPTNANSPNFCHGSSDTDIPT----SV-IRSTDNAQPPSSD--PGTN 170
+S AT + HGSS + PT SV +++ + PP + T
Sbjct: 179 FTSPEHVATVQQTCTSPEEGQTLIHGSSVINSPTPDTLSVNVQNLSSVTPPDVNQVSTTA 238
Query: 171 RDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERL 230
+ PFK R+ FRQ P D+P+ SEV S S+S+KSKW AASARYK+S+SK TR +KE+L
Sbjct: 239 VNSPFKPRILFRQPPTDTPQEQGSSEVLSLSDSIKSKWFAASARYKDSLSKSTRGIKEKL 298
Query: 231 LSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAGGPSSALFKGK 290
++RN SVKELSKEVQREMSAGIAGVA+MIERLDL +KR+G S G S+ +KGK
Sbjct: 299 VARNNSVKELSKEVQREMSAGIAGVARMIERLDLTTKRTGPSMSDSGFTGATSNFSWKGK 358
Query: 291 GVQES----AMNRRSAEVAPDIMSAAPSNVTGTNSAQLEVAH 328
GV+++ A+ + S E+ D A S+ +GT A++E++H
Sbjct: 359 GVEQNIIAQALAKTSEEIDRDTSLGASSHASGTVQARVEISH 400
>gi|388511239|gb|AFK43681.1| unknown [Lotus japonicus]
Length = 365
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/335 (48%), Positives = 211/335 (62%), Gaps = 32/335 (9%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT CKHEYHL CILEWSQRSKECPICWQ LK+PA QELLAA+E+E+ +SR + S++
Sbjct: 36 VTCCKHEYHLHCILEWSQRSKECPICWQSLALKDPASQELLAAVEAEKRLRSRNVNSSSF 95
Query: 68 VTFPEDFDNGPDGTYFDYDDMEARIMQHLAAA----RYFRRREMQRYPALDASQVVDSSS 123
++G DG+Y + D + +IMQHL AA R+ R+E R + A +SS
Sbjct: 96 AN--SRLNDGHDGSYSEECDFDEQIMQHLVAAASRARFVHRQE--RRGSAGAGPSANSSV 151
Query: 124 AATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPS---------SDPGTNRDGP 174
PT + GSS PTS + S N QPP+ + P T D P
Sbjct: 152 HVRREQPTPTTTS---LSQGSS----PTSGVPSNVNNQPPTPVVDEVARNTSPQT--DVP 202
Query: 175 FKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRN 234
F++RV + Q+PP+S RR N E+FSF ES+KSK+SAASA+YKESISKGTR LKE+LL+RN
Sbjct: 203 FRARVIYSQTPPESARRLNTPEMFSFPESIKSKFSAASAKYKESISKGTRGLKEKLLARN 262
Query: 235 TSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGT--PAPSSANAGGPSSALFKGKGV 292
SVKELSK VQREM+AGIAGVA+MIERLDL+SKRS P + +G P K V
Sbjct: 263 ASVKELSKGVQREMNAGIAGVARMIERLDLSSKRSAALFPDRTGETSGFPEEV----KSV 318
Query: 293 QESAMNRRSAEVAPDIMSAAPSNVTGTNSAQLEVA 327
+E + + + +V + S APS ++ A++E+A
Sbjct: 319 KEHSPSEDNEDVVHHVTSDAPSLISNMVPARVEIA 353
>gi|255552299|ref|XP_002517194.1| protein binding protein, putative [Ricinus communis]
gi|223543829|gb|EEF45357.1| protein binding protein, putative [Ricinus communis]
Length = 414
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/347 (48%), Positives = 206/347 (59%), Gaps = 44/347 (12%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAA- 66
VTSCKHEYHLQCILEWSQRSKECPICWQ VL+EPACQELLAA+E+ER +SR SAA
Sbjct: 69 VTSCKHEYHLQCILEWSQRSKECPICWQLLVLQEPACQELLAAVETERRLRSRNTPSAAF 128
Query: 67 --PVTFPEDFDNGPDGTYFDYDDMEARIMQHLAA----ARYFRRREMQRYPALDASQVVD 120
P F ED D D D D E RIMQHLAA ARY RRE QR
Sbjct: 129 SNPTRFHEDIDVEQDSYSDDSDFDE-RIMQHLAAVASRARYICRRERQR----------S 177
Query: 121 SSSAATASLMLPTNANSP-------------NFCHGSSDTDIPTSVIRSTDNAQPPSSDP 167
S + +L+ P+ N P + +GSS + TS++ S PS D
Sbjct: 178 SGQGPSRALIFPSPTNEPSAQQTHTSAVEGQDVYYGSSRGNSATSLLESQS---LPSVDT 234
Query: 168 GTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLK 227
++D K R PP + SE SFSES+KSKW AAS+RYKESISK T+ +K
Sbjct: 235 AVSKDVSSKPR------PPSTVAPQTSSEGLSFSESMKSKWVAASSRYKESISKSTQGIK 288
Query: 228 ERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAGGPSSALF 287
E+LL+RN SVKELS+ VQREMSAGIAGVA+M ERLDL KR+G +P S G S
Sbjct: 289 EKLLARNNSVKELSRGVQREMSAGIAGVARMFERLDLTPKRTGASSPVSGCREGTSELSL 348
Query: 288 KGKGVQES----AMNRRSAEVAPDIMSAAPSNVTGTNSAQLEVAHQR 330
KGKG+QE+ A+N++S EV P +V+ ++EV H++
Sbjct: 349 KGKGMQENTILQALNKKSEEVPCAASMDVPLHVSYNVQGRVEVHHEQ 395
>gi|225432562|ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Vitis vinifera]
gi|297737001|emb|CBI26202.3| unnamed protein product [Vitis vinifera]
Length = 391
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 193/310 (62%), Gaps = 20/310 (6%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSR---PIAS 64
+T+C+HEYHLQCILEWSQRSKECPICWQ VL++P QELLAA+E ER +SR P S
Sbjct: 44 ITNCRHEYHLQCILEWSQRSKECPICWQFLVLQDPTSQELLAAVEGERSPRSRNSSPTES 103
Query: 65 AAPVTFPEDFDNGPDGTYFDYDDMEARIMQHLAAAR----YFRRREMQRYPALDASQVV- 119
F DF D +Y D D++ IMQH+ AA Y RRE QR L S+ +
Sbjct: 104 TFLHHFQGDFGYDHDASYSDDSDLDEHIMQHVVAAASGAPYVHRRERQRSSGLGPSESLV 163
Query: 120 --DSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSS----------DP 167
+ ++ P+ N SS+++ P +S NAQP SS
Sbjct: 164 FPPTDVPDVQTINTPSPEEYQNSGSVSSESNSPAHSDQSAINAQPLSSGVPSVVNMVSST 223
Query: 168 GTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLK 227
NRDG K RV F Q P SPRRP+PS++ SFS+S+KS+ SAASARYKESISKGTR K
Sbjct: 224 AANRDGLAKPRVIFDQPLPSSPRRPSPSDLLSFSDSIKSRLSAASARYKESISKGTRGFK 283
Query: 228 ERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAGGPSSALF 287
E+LLSRN SVKELSK VQREMSAGIA V +MIERLD KR+G P S+ GG S+
Sbjct: 284 EKLLSRNNSVKELSKGVQREMSAGIASVTRMIERLDPILKRTGASNPDSSFTGGTSNVSH 343
Query: 288 KGKGVQESAM 297
KGKGVQE+ +
Sbjct: 344 KGKGVQENVI 353
>gi|449463084|ref|XP_004149264.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Cucumis sativus]
Length = 365
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 160/334 (47%), Positives = 209/334 (62%), Gaps = 27/334 (8%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+TSCKHEYHLQCIL+WSQRS ECPIC Q VLK+P QELLAA+ SERL KSR ++SAA
Sbjct: 48 ITSCKHEYHLQCILDWSQRSDECPICCQLLVLKDPVGQELLAAMASERLLKSRGLSSAAS 107
Query: 68 VT--FPEDFDNGPDGTYFDYDDMEARIMQHLAAA----RYFRRREMQRYPALDASQVVDS 121
+ F E+FD D + D D + IMQHLAAA RY +RRE QR+ + SQV
Sbjct: 108 TSLHFHENFDFDHDSVHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGVGPSQV--- 164
Query: 122 SSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPS--SDPGTNRDGPFKSRV 179
SSA P SP F D + + S + P G N+ P S +
Sbjct: 165 SSAC------PEVPMSPRF----QDATLTSPNSDSPSPSSPMPSVGRTGINKISP--SVI 212
Query: 180 FFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKE 239
+P S ++ N SE SF +S+KSKWSA SA+YKESI + T+ +KE+LL+RN+SVKE
Sbjct: 213 LLPDTPSGSQQKTNQSEGLSFQDSIKSKWSATSAKYKESILRSTQGIKEKLLARNSSVKE 272
Query: 240 LSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAGGPSSALFKGKG-VQESAMN 298
LSK V+RE+SAGIAGVA+MI+RLDL SKR+ + +GG S++L KGK VQESA+
Sbjct: 273 LSKGVKREVSAGIAGVARMIDRLDLTSKRNTGSVSFFSCSGGTSNSL-KGKNVVQESAVT 331
Query: 299 RRSAEVAPDIMSAAPSNVTGTNSAQLEVA-HQRG 331
S ++ I + +PS V+ T + ++V+ QRG
Sbjct: 332 DGSVKIN-RICTGSPSQVSPTVPSSVKVSLAQRG 364
>gi|356520043|ref|XP_003528675.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
Length = 371
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/318 (47%), Positives = 186/318 (58%), Gaps = 34/318 (10%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+TSCKHEYHL CILEWSQRSKECPICWQ +LK+PA QELL A+E+E+ SR + S A
Sbjct: 51 ITSCKHEYHLHCILEWSQRSKECPICWQLLILKDPASQELLNAVEAEKRLSSRTVYSHA- 109
Query: 68 VTFPEDFDNGPDGTYFDYDD--MEARIMQHLAAA----RYFRRREMQRYPALDASQVVDS 121
F + DD + ++ QHL +A RY R E QR P S+V+
Sbjct: 110 --FTDSRSPLHRQIILSQDDSDFDEQLTQHLVSAASRARYICRGERQRSPGAGPSEVLVF 167
Query: 122 SSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFF 181
+S+ AS M T SP+ G T +SV T N S D P K RV +
Sbjct: 168 NSSMHASGMQSTLTTSPS--SGVPSTSAFSSVGMVTTNTSSES-------DMPCKPRVIY 218
Query: 182 RQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKELS 241
Q P++ RR N SE+FSF ES KSK SAASAR KESISK TR LKE+L++RN SVKELS
Sbjct: 219 SQPSPENARRLNTSEIFSFPESFKSKLSAASARCKESISKNTRGLKEKLIARNASVKELS 278
Query: 242 KEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAGGPSSALFKGKGVQESAMNR-- 299
K VQREM+AGIAGVA+M+ERLDL SKRS +P KGK VQE+ + +
Sbjct: 279 KGVQREMNAGIAGVARMVERLDLTSKRSSSPL-----------IPVKGKSVQENGVEQFP 327
Query: 300 ---RSAEVAPDIMSAAPS 314
S + D+ S A S
Sbjct: 328 NKEESGVLVADVTSNAAS 345
>gi|356564526|ref|XP_003550504.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
Length = 376
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 186/312 (59%), Gaps = 50/312 (16%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAA- 66
+TSCKHEYHL CILEW QRSKECPICWQ +LK+PA QELL A+E+E+ SR + S A
Sbjct: 56 ITSCKHEYHLHCILEWLQRSKECPICWQLLILKDPASQELLNAVEAEKRLSSRTVYSHAF 115
Query: 67 -----PVTFPEDFDNGPDGTYFDYDDMEARIMQHLAAA----RYFRRREMQRYPALDASQ 117
P+ + +N D + D D + ++MQHL +A RY R + QR P S+
Sbjct: 116 MDSRSPL---QRLNNDQDDSCSDDSDFDEQLMQHLVSAASRARYICRSKRQRSPGAGPSE 172
Query: 118 VVDSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSS----------DP 167
V+ +S+ AS M PT SP TS + S + Q P+S +
Sbjct: 173 VLVFNSSIHASGMQPTLTTSP------------TSGVPSAAHIQSPTSTFSCVGMVTTNT 220
Query: 168 GTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLK 227
+ D P K RV + Q P+S RR N SE+FSFSES KSK SAASAR KESISK TR LK
Sbjct: 221 SSESDMPSKPRVIYSQPSPESARRLNTSEMFSFSESFKSKLSAASARCKESISKNTRGLK 280
Query: 228 ERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAGGPSSALF 287
E+L++RN SVKELSK VQ EM+AGIA VA+MIERLDL SK S SSAL
Sbjct: 281 EKLIARNASVKELSKGVQCEMNAGIACVARMIERLDLTSKWS-------------SSALI 327
Query: 288 --KGKGVQESAM 297
KGK VQE+ +
Sbjct: 328 PVKGKSVQENGV 339
>gi|356546418|ref|XP_003541623.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
Length = 359
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 194/326 (59%), Gaps = 43/326 (13%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIA-SAA 66
VT CKHEYHL CI+EWSQRSKECPICWQ LK+PA QELLAA+E E+ +SR IA S A
Sbjct: 49 VTCCKHEYHLHCIIEWSQRSKECPICWQSLALKDPASQELLAAVEDEKCMRSRNIANSRA 108
Query: 67 PVTFPEDFDNGPDGTYFDYDDMEARIMQHLAAA----RYFRRREMQRYPALDASQVVDSS 122
P+ + D + D D + +IM+ L +A + +R+E +R P+ S+ + +
Sbjct: 109 PLG---QLNESHDDSCSDDSDFDDQIMKRLVSAARRAHFVQRQERKRSPSAGPSEALGVN 165
Query: 123 SAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFR 182
S+ S + T S SS +P S + ST + QPP+ +
Sbjct: 166 SSMHVSEVQTTLTTS------SSGGSLPASGVPSTVSIQPPALN---------------- 203
Query: 183 QSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKELSK 242
+ P+S RRPN SE+ SF ES KSK+SAASARYKESISK T LKE+LL+ N SVKELSK
Sbjct: 204 -TTPESARRPNTSEI-SFPESFKSKFSAASARYKESISKSTLGLKEKLLAHNVSVKELSK 261
Query: 243 EVQREMSAGIAGVAKMIERLDLASKRSGTP---APSSANAGGPSSALFKGKGVQESAM-- 297
VQREM+AGIAGVA+MIERLDL+SKRS P S A + PSS GK V+E+ +
Sbjct: 262 GVQREMNAGIAGVARMIERLDLSSKRSSAPLIAVHSVATSDFPSS----GKSVEENGIGG 317
Query: 298 --NRRSAEVAPDIMSAAPSNVTGTNS 321
++ + D+ S P VT S
Sbjct: 318 SPSKENGGAVHDVSSDVPPLVTNMQS 343
>gi|224102029|ref|XP_002312516.1| predicted protein [Populus trichocarpa]
gi|222852336|gb|EEE89883.1| predicted protein [Populus trichocarpa]
Length = 301
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/295 (50%), Positives = 183/295 (62%), Gaps = 21/295 (7%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPV 68
T CKHEYHLQCI+EWSQRSKECPICWQ VLK+PA QELLAA+E+ERL + R A+ +
Sbjct: 20 TCCKHEYHLQCIVEWSQRSKECPICWQLLVLKDPASQELLAAVETERLFRPRNSNPASMI 79
Query: 69 T--FPEDFDNGPDGTYFDYDDMEARIMQHLAA-----ARYFRRREMQRYPALDASQVVDS 121
ED+D +Y D D + +MQHL+A ARY +RE R L SQV+
Sbjct: 80 VHHLDEDYDV-EQDSYSDDSDFDDHVMQHLSASAASRARYVCKRERHRSTGLGPSQVLVF 138
Query: 122 SSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGT-NRDGPFKSRVF 180
+S S + T SP I S ++ SS PGT + S V
Sbjct: 139 TSPEHVSTVQQT-CTSPE-----------EGQILSYGSSVINSSTPGTPSVKIQNLSSVA 186
Query: 181 FRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKEL 240
P D P+ S++ S SES+KSKW AASARYKES+SKGTR +KE+LL+RN SVKEL
Sbjct: 187 PPVPPIDPPQGQGSSDLSSLSESIKSKWFAASARYKESLSKGTRGMKEKLLARNNSVKEL 246
Query: 241 SKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAGGPSSALFKGKGVQES 295
SKEVQREMSAGIAGVA+MIERLDL SKR+G S G S+ +KGKGV+++
Sbjct: 247 SKEVQREMSAGIAGVARMIERLDLTSKRAGPSMSDSDFTRGTSNFSWKGKGVEQN 301
>gi|148910804|gb|ABR18468.1| unknown [Picea sitchensis]
Length = 423
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/324 (44%), Positives = 182/324 (56%), Gaps = 44/324 (13%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESER---LSKS--RPI 62
VTSCKHEYHLQCILEWSQRSKECP+C + +LK+PA QELLAA+E ER LS+S PI
Sbjct: 45 VTSCKHEYHLQCILEWSQRSKECPMCLRILILKDPASQELLAAVEQERSFRLSRSPNTPI 104
Query: 63 ASAAPVTFPEDFDNGPDGTYFDYDDMEARIMQHLAAA-----RYFRRREMQRYPALDAS- 116
+ V E F + P Y D D E RIMQHLAAA +F RRE R+ +
Sbjct: 105 FARNSVDEIE-FHHVP--AYTDDSDFEERIMQHLAAAAMGRAHHFSRRENLRHRSSGQGH 161
Query: 117 -QVVDSSSAATASLMLPTN-----ANSPNFCHGSSDTDIPTSVIRSTDNAQ--PPSSDPG 168
Q + S+ A + P N N P F S D+ P S + Q P S PG
Sbjct: 162 PQFLVFSTHPNAPPISPNNIEAQDGNIPTFT--SLDSTTPAMTATSEEQLQQGPLPSPPG 219
Query: 169 T-----------------NRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAA 211
NR PF R Q P++ +R PS+ SFSES KS+++A
Sbjct: 220 QMNSRANRNTGIAVQGLDNRSEPFTPRNNAGQQSPENQQRSRPSDFQSFSESFKSRFNAV 279
Query: 212 SARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGT 271
S RYKESIS+ TR KE+ +RN +V EL +EVQRE+SAGIAGVA+++ERLD +SK +G
Sbjct: 280 STRYKESISRSTRGFKEKFFARNNAVTELGREVQREVSAGIAGVARIMERLDPSSKNNGA 339
Query: 272 PAPSS---ANAGGPSSALFKGKGV 292
A + ++AG P +G+ V
Sbjct: 340 SASDNMEGSSAGMPVRQAVEGRQV 363
>gi|297804890|ref|XP_002870329.1| hypothetical protein ARALYDRAFT_493488 [Arabidopsis lyrata subsp.
lyrata]
gi|297316165|gb|EFH46588.1| hypothetical protein ARALYDRAFT_493488 [Arabidopsis lyrata subsp.
lyrata]
Length = 365
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 177/296 (59%), Gaps = 18/296 (6%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSR---PIAS 64
VTSCKHEYHLQCI+EWSQRSKECPICWQ FVL++PA QELL+A+E ERL K+R +
Sbjct: 55 VTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDPASQELLSAVEKERLLKTRNISSSSP 114
Query: 65 AAPVTFPEDFDNGPDGTYFDYDDMEARIMQHLAAARY----FRRREMQRYPALDASQVVD 120
+ EDF + + + F D + ++HL A + RRR+ Q +L +S D
Sbjct: 115 ISIHHSQEDFHSEEEESQFSSFDEQ--FLRHLTEAAHRRCLLRRRDGQISSSLVSS--TD 170
Query: 121 SSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVF 180
++ L+ ++ + + P+ + A P S D SR+
Sbjct: 171 PTTIHPTDLVNLYRISAISHVEHQNTNPCPSP---GSMTASPVSGHSPVPADSNNASRIS 227
Query: 181 FRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKEL 240
SP S + PN E S E++KSK +AASA+YKESISK + LKE+LL+RN SVKEL
Sbjct: 228 PGLSPSRSSQSPNRPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKEL 287
Query: 241 SKEVQREMSAGIAGVAKMIERLDLASKRSGTPA---PSSANAGGPSSALFKGKGVQ 293
SK VQREM+AGIAGVA+MIERLD +SKR G A S+A A G + + FKGK V+
Sbjct: 288 SKGVQREMNAGIAGVARMIERLDFSSKRFGGSAHVSTSTATASGFNFS-FKGKRVE 342
>gi|5280989|emb|CAB46003.1| RING-H2 finger protein RHF1a [Arabidopsis thaliana]
gi|7268127|emb|CAB78464.1| RING-H2 finger protein RHF1a [Arabidopsis thaliana]
Length = 376
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 175/296 (59%), Gaps = 18/296 (6%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSR---PIAS 64
VTSCKHEYHLQCI+EWSQRSKECPICWQ FVL++PA QELLAA+E ERL K+R +
Sbjct: 61 VTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDPASQELLAAVEKERLLKTRNISSSSP 120
Query: 65 AAPVTFPEDFDNGPDGTYFDYDDMEARIMQHLAAARY----FRRREMQRYPALDASQVVD 120
+ +DF + + + F D + ++HL A + RRR+ Q + D
Sbjct: 121 ISIHHSHDDFHSEEEESQFSSFD--EQFLRHLTEAAHRRCLLRRRDGQ--ISSSLVSSSD 176
Query: 121 SSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVF 180
++ L+ ++ + + P+ + SS P + +G SR+
Sbjct: 177 PTTIHPTDLVNLYRLSAISHVEHQNSNPCPSPGSMTPSPVSGHSSIPADSNNG---SRIS 233
Query: 181 FRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKEL 240
SP S + P E S E++KSK +AASA+YKESISK + LKE+LL+RN SVKEL
Sbjct: 234 PGPSPSRSSQSPKSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKEL 293
Query: 241 SKEVQREMSAGIAGVAKMIERLDLASKRSGTPA---PSSANAGGPSSALFKGKGVQ 293
SK VQREM+AGIAGVA+MIER+D +SKR G A S+A A G + + FKGK V+
Sbjct: 294 SKGVQREMNAGIAGVARMIERMDFSSKRFGGSAHVSTSTATASGFNFS-FKGKRVE 348
>gi|3790585|gb|AAC69855.1| RING-H2 finger protein RHF1a, partial [Arabidopsis thaliana]
Length = 329
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 175/296 (59%), Gaps = 18/296 (6%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSR---PIAS 64
VTSCKHEYHLQCI+EWSQRSKECPICWQ FVL++PA QELLAA+E ERL K+R +
Sbjct: 19 VTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDPASQELLAAVEKERLLKTRNISSSSP 78
Query: 65 AAPVTFPEDFDNGPDGTYFDYDDMEARIMQHLAAARY----FRRREMQRYPALDASQVVD 120
+ +DF + + + F D + ++HL A + RRR+ Q + D
Sbjct: 79 ISIHHSHDDFHSEEEESQFSSFD--EQFLRHLTEAAHRRCLLRRRDGQ--ISSSLVSSSD 134
Query: 121 SSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVF 180
++ L+ ++ + + P+ + SS P + +G SR+
Sbjct: 135 PTTIHPTDLVNLYRLSAISHVEHQNSNPCPSPGSMTPSPVSGHSSIPADSNNG---SRIS 191
Query: 181 FRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKEL 240
SP S + P E S E++KSK +AASA+YKESISK + LKE+LL+RN SVKEL
Sbjct: 192 PGPSPSRSSQSPKSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKEL 251
Query: 241 SKEVQREMSAGIAGVAKMIERLDLASKRSGTPA---PSSANAGGPSSALFKGKGVQ 293
SK VQREM+AGIAGVA+MIER+D +SKR G A S+A A G + + FKGK V+
Sbjct: 252 SKGVQREMNAGIAGVARMIERMDFSSKRFGGSAHVSTSTATASGFNFS-FKGKRVE 306
>gi|30682750|ref|NP_193158.2| E3 ubiquitin-protein ligase RHF1A [Arabidopsis thaliana]
gi|75339838|sp|Q4TU14.1|RHF1A_ARATH RecName: Full=E3 ubiquitin-protein ligase RHF1A; AltName:
Full=RING-H2 zinc finger protein RHF1a
gi|66865948|gb|AAY57608.1| RING finger family protein [Arabidopsis thaliana]
gi|332657995|gb|AEE83395.1| E3 ubiquitin-protein ligase RHF1A [Arabidopsis thaliana]
Length = 371
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 175/296 (59%), Gaps = 18/296 (6%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSR---PIAS 64
VTSCKHEYHLQCI+EWSQRSKECPICWQ FVL++PA QELLAA+E ERL K+R +
Sbjct: 61 VTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDPASQELLAAVEKERLLKTRNISSSSP 120
Query: 65 AAPVTFPEDFDNGPDGTYFDYDDMEARIMQHLAAARY----FRRREMQRYPALDASQVVD 120
+ +DF + + + F D + ++HL A + RRR+ Q + D
Sbjct: 121 ISIHHSHDDFHSEEEESQFSSFD--EQFLRHLTEAAHRRCLLRRRDGQ--ISSSLVSSSD 176
Query: 121 SSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVF 180
++ L+ ++ + + P+ + SS P + +G SR+
Sbjct: 177 PTTIHPTDLVNLYRLSAISHVEHQNSNPCPSPGSMTPSPVSGHSSIPADSNNG---SRIS 233
Query: 181 FRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKEL 240
SP S + P E S E++KSK +AASA+YKESISK + LKE+LL+RN SVKEL
Sbjct: 234 PGPSPSRSSQSPKSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKEL 293
Query: 241 SKEVQREMSAGIAGVAKMIERLDLASKRSGTPA---PSSANAGGPSSALFKGKGVQ 293
SK VQREM+AGIAGVA+MIER+D +SKR G A S+A A G + + FKGK V+
Sbjct: 294 SKGVQREMNAGIAGVARMIERMDFSSKRFGGSAHVSTSTATASGFNFS-FKGKRVE 348
>gi|26450997|dbj|BAC42605.1| putative RING-H2 finger protein RHF1a [Arabidopsis thaliana]
Length = 371
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 175/296 (59%), Gaps = 18/296 (6%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSR---PIAS 64
VTSCKHEYHLQCI+EWSQRS+ECPICWQ FVL++PA QELLAA+E ERL K+R +
Sbjct: 61 VTSCKHEYHLQCIIEWSQRSRECPICWQLFVLRDPASQELLAAVEKERLLKTRNISSSSP 120
Query: 65 AAPVTFPEDFDNGPDGTYFDYDDMEARIMQHLAAARY----FRRREMQRYPALDASQVVD 120
+ +DF + + + F D + ++HL A + RRR+ Q + D
Sbjct: 121 ISIHHSHDDFHSEEEESQFSSFD--EQFLRHLTEAAHRRCLLRRRDGQ--ISSSLVSSSD 176
Query: 121 SSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVF 180
++ L+ ++ + + P+ + SS P + +G SR+
Sbjct: 177 PTTIHPTDLVNLYRLSAISHVEHQNSNPCPSPGSMTPSPVSGHSSIPADSNNG---SRIS 233
Query: 181 FRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKEL 240
SP S + P E S E++KSK +AASA+YKESISK + LKE+LL+RN SVKEL
Sbjct: 234 PGPSPSRSSQSPKSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKEL 293
Query: 241 SKEVQREMSAGIAGVAKMIERLDLASKRSGTPA---PSSANAGGPSSALFKGKGVQ 293
SK VQREM+AGIAGVA+MIER+D +SKR G A S+A A G + + FKGK V+
Sbjct: 294 SKGVQREMNAGIAGVARMIERMDFSSKRFGGSAHVSTSTATASGFNFS-FKGKRVE 348
>gi|297808199|ref|XP_002871983.1| hypothetical protein ARALYDRAFT_489047 [Arabidopsis lyrata subsp.
lyrata]
gi|297317820|gb|EFH48242.1| hypothetical protein ARALYDRAFT_489047 [Arabidopsis lyrata subsp.
lyrata]
Length = 376
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 157/276 (56%), Gaps = 22/276 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+TSCKHEYHLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 48 LTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPARNATI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQRYPALDASQ-- 117
P DF+ D ++E RI+QHLAA AR+ RRE R +
Sbjct: 108 FRHPTLGDFELQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHPQ 167
Query: 118 -VVDSSSAATASLMLPTNANSPNFCHGSSDT--DIPTSVI---RSTDNAQPP-SSDPGTN 170
+V SS +S S G SDT ++P + + N QPP SS P
Sbjct: 168 FMVFSSHPNASSPPPHPPMPSSPSQRGESDTVSNLPHNTLGEGSHQSNTQPPTSSHP--R 225
Query: 171 RDGPFKSRVFFR---QSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLK 227
+ P S R QS P R PSE+ SFSES+KS+ +A S RYKESISK TR+ K
Sbjct: 226 QVSPSASDSNSRPVNQSSPSDQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWK 285
Query: 228 ERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
+RL SRNTS+ +L EV+RE+SAGIA V++M+ERL+
Sbjct: 286 DRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLE 321
>gi|359481051|ref|XP_002270570.2| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Vitis vinifera]
Length = 387
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 159/294 (54%), Gaps = 47/294 (15%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAA- 66
+TSCKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P SA
Sbjct: 50 LTSCKHEFHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRLTPPRSAIF 109
Query: 67 --PVTFPEDFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQR--------- 109
P + + P GT + ++E RI+QHLAA A + RRE QR
Sbjct: 110 HHPTLGDFELQHLPVGT--NDPELEERIIQHLAAAAAMGRAHHIARREGQRSRSSAHGRS 167
Query: 110 -------YPALDASQVVDSS------------SAATASLMLPTNANSPNFCHGSSDTDIP 150
+P AS V +S + A+ S+ LP + P+ +IP
Sbjct: 168 HFLVFSTHPNATASGPVPASLVQVGENEPAAITVASPSIPLPAGGDEPS-------QEIP 220
Query: 151 TSVIRSTDNAQPPSSDPG-TNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWS 209
TD+ +S T R F +R QS P R PSE+ SFSES+KS+ +
Sbjct: 221 QFPSVQTDHMSASASRSAVTPRRISFNNRSSASQSSPPDQDRAGPSELQSFSESLKSRLN 280
Query: 210 AASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
A S RYKESISK TR KERL SRN S+ +L EV+RE++AGIA V++M+ERLD
Sbjct: 281 AVSMRYKESISKSTRGWKERLFSRNNSMADLGSEVRREVNAGIASVSRMMERLD 334
>gi|296089345|emb|CBI39117.3| unnamed protein product [Vitis vinifera]
Length = 391
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 159/294 (54%), Gaps = 47/294 (15%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAA- 66
+TSCKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P SA
Sbjct: 50 LTSCKHEFHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRLTPPRSAIF 109
Query: 67 --PVTFPEDFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQR--------- 109
P + + P GT + ++E RI+QHLAA A + RRE QR
Sbjct: 110 HHPTLGDFELQHLPVGT--NDPELEERIIQHLAAAAAMGRAHHIARREGQRSRSSAHGRS 167
Query: 110 -------YPALDASQVVDSS------------SAATASLMLPTNANSPNFCHGSSDTDIP 150
+P AS V +S + A+ S+ LP + P+ +IP
Sbjct: 168 HFLVFSTHPNATASGPVPASLVQVGENEPAAITVASPSIPLPAGGDEPS-------QEIP 220
Query: 151 TSVIRSTDNAQPPSSDPG-TNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWS 209
TD+ +S T R F +R QS P R PSE+ SFSES+KS+ +
Sbjct: 221 QFPSVQTDHMSASASRSAVTPRRISFNNRSSASQSSPPDQDRAGPSELQSFSESLKSRLN 280
Query: 210 AASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
A S RYKESISK TR KERL SRN S+ +L EV+RE++AGIA V++M+ERLD
Sbjct: 281 AVSMRYKESISKSTRGWKERLFSRNNSMADLGSEVRREVNAGIASVSRMMERLD 334
>gi|30688252|ref|NP_851051.1| E3 ubiquitin-protein ligase RHF2A [Arabidopsis thaliana]
gi|332005582|gb|AED92965.1| E3 ubiquitin-protein ligase RHF2A [Arabidopsis thaliana]
Length = 375
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 156/276 (56%), Gaps = 22/276 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+TSCKHEYHLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 48 LTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQRYPALDASQ-- 117
P DF+ D ++E RI+QHLAA AR+ RRE R +
Sbjct: 108 FRHPTLGDFELQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQ 167
Query: 118 -VVDSSSAATASLMLPTNANSPNFCHGSSDT--DIPTSVI---RSTDNAQPP-SSDPGTN 170
+V SS +S S SDT ++P + + N QPP SS P
Sbjct: 168 FMVFSSQPNASSPPPHPPMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHP--R 225
Query: 171 RDGPFKSRVFFR---QSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLK 227
+ P S R QS P R PSE+ SFSES+KS+ +A S RYKESISK TR+ K
Sbjct: 226 QVSPSASDSNSRPLNQSSPSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWK 285
Query: 228 ERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
+RL SRNTS+ +L EV+RE+SAGIA V++M+ERL+
Sbjct: 286 DRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLE 321
>gi|18420424|ref|NP_568410.1| E3 ubiquitin-protein ligase RHF2A [Arabidopsis thaliana]
gi|30688246|ref|NP_851050.1| E3 ubiquitin-protein ligase RHF2A [Arabidopsis thaliana]
gi|75315838|sp|Q9ZT42.1|RHF2A_ARATH RecName: Full=E3 ubiquitin-protein ligase RHF2A; AltName:
Full=RING-H2 zinc finger protein RHF2a
gi|11762136|gb|AAG40346.1|AF324994_1 CIC7E11 [Arabidopsis thaliana]
gi|3790587|gb|AAC69856.1| RING-H2 finger protein RHF2a [Arabidopsis thaliana]
gi|13374859|emb|CAC34493.1| RING-H2 finger protein RHF2a [Arabidopsis thaliana]
gi|26983856|gb|AAN86180.1| unknown protein [Arabidopsis thaliana]
gi|332005583|gb|AED92966.1| E3 ubiquitin-protein ligase RHF2A [Arabidopsis thaliana]
gi|332005584|gb|AED92967.1| E3 ubiquitin-protein ligase RHF2A [Arabidopsis thaliana]
Length = 375
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 156/276 (56%), Gaps = 22/276 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+TSCKHEYHLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 48 LTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQRYPALDASQ-- 117
P DF+ D ++E RI+QHLAA AR+ RRE R +
Sbjct: 108 FRHPTLGDFELQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQ 167
Query: 118 -VVDSSSAATASLMLPTNANSPNFCHGSSDT--DIPTSVI---RSTDNAQPP-SSDPGTN 170
+V SS +S S SDT ++P + + N QPP SS P
Sbjct: 168 FMVFSSQPNASSPPPHPPMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHP--R 225
Query: 171 RDGPFKSRVFFR---QSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLK 227
+ P S R QS P R PSE+ SFSES+KS+ +A S RYKESISK TR+ K
Sbjct: 226 QVSPSASDSNSRPLNQSSPSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWK 285
Query: 228 ERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
+RL SRNTS+ +L EV+RE+SAGIA V++M+ERL+
Sbjct: 286 DRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLE 321
>gi|222423136|dbj|BAH19547.1| AT5G22000 [Arabidopsis thaliana]
Length = 375
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 156/276 (56%), Gaps = 22/276 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+TSCKHEYHLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 48 LTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQRYPALDASQ-- 117
P DF+ D ++E RI+QHLAA AR+ RRE R +
Sbjct: 108 FRHPTLGDFELQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQ 167
Query: 118 -VVDSSSAATASLMLPTNANSPNFCHGSSDT--DIPTSVI---RSTDNAQPP-SSDPGTN 170
+V SS +S S SDT ++P + + N QPP SS P
Sbjct: 168 FMVFSSQPNASSPPPHPPMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHP--R 225
Query: 171 RDGPFKSRVFFR---QSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLK 227
+ P S R QS P R PSE+ SFSES+KS+ +A S RYKESISK TR+ K
Sbjct: 226 QVSPSASDSNSRPLNQSSPSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWK 285
Query: 228 ERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
+RL SRNTS+ +L EV+RE+SAGIA V++M+ERL+
Sbjct: 286 DRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLE 321
>gi|26451710|dbj|BAC42950.1| putative RING-H2 finger protein RHF2a [Arabidopsis thaliana]
Length = 353
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 156/276 (56%), Gaps = 22/276 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+TSCKHEYHLQCILEW Q+S +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 48 LTSCKHEYHLQCILEWCQKSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQRYPALDASQ-- 117
P DF+ D ++E RI+QHLAA AR+ RRE R +
Sbjct: 108 FRHPTLGDFELQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQ 167
Query: 118 -VVDSSSAATASLMLPTNANSPNFCHGSSDT--DIPTSVI---RSTDNAQPP-SSDPGTN 170
+V SS +S S SDT ++P + + N QPP SS P
Sbjct: 168 FMVFSSQPNASSPPPHPPMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHP--R 225
Query: 171 RDGPFKSRVFFR---QSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLK 227
+ P S R QS P R PSE+ SFSES+KS+ +A S RYKESISK TR+ K
Sbjct: 226 QVSPSASDSNSRPLNQSSPSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWK 285
Query: 228 ERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
+RL SRNTS+ +L EV+RE+SAGIA V++M+ERL+
Sbjct: 286 DRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLE 321
>gi|224138254|ref|XP_002322768.1| predicted protein [Populus trichocarpa]
gi|222867398|gb|EEF04529.1| predicted protein [Populus trichocarpa]
Length = 387
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 156/289 (53%), Gaps = 33/289 (11%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+CKHE+HLQCILEW QRS ECP+C Q LK+P QEL A+E ER ++ P +A
Sbjct: 45 VTNCKHEFHLQCILEWCQRSSECPMCLQSISLKDPTSQELFEAVERERKIRAAPSRNATI 104
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAA------RYFRRREMQR---------- 109
P DF+ ++E RI+QHLAAA R+F RRE QR
Sbjct: 105 FHHPTLGDFELQHLPVGVSDSELEERIIQHLAAAAAMGRTRHFGRREGQRNRTSSHGRPH 164
Query: 110 ------YPALDASQVVDSSSAATASLM--LPTNANSPNFCHGSSDTDIPTSVIRS----T 157
+P S V SS P + SP+ S + P ++S T
Sbjct: 165 FLVFSTHPGAQPSGHVSSSLTQLGGENEPAPVSVASPSTQLTSVGDEPPQQALQSPSVLT 224
Query: 158 DNAQPPSSD---PGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASAR 214
D + S P N+ F +R QS + R PSE+ SFSES+KS+ +A S R
Sbjct: 225 DQSSSASGSTAMPANNQGVSFNNRSASSQSSLPNQDRAGPSELQSFSESLKSRLNAVSMR 284
Query: 215 YKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
YKESIS+ TR KERL SRN+S+ ++S +V+RE++AGIA V++M+ERL+
Sbjct: 285 YKESISRSTRGWKERLFSRNSSMSDISSDVRREVNAGIATVSRMMERLE 333
>gi|312282131|dbj|BAJ33931.1| unnamed protein product [Thellungiella halophila]
Length = 378
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 164/312 (52%), Gaps = 59/312 (18%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+TSCKHEYHLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 48 LTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPSRNATI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQR-------YPA 112
P DF+ D ++E RI+QHLAA AR+ RRE R +P
Sbjct: 108 FRHPTLGDFELQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGARREGHRSRSSSQGHPQ 167
Query: 113 L--------------------DASQVVDSSSAATASLMLPTNANSPNFCHGS----SDTD 148
SQ DS + + LP +SPN G S+
Sbjct: 168 FMVFSSHPNASPPPPHPPMPSSPSQRDDSDTVTS----LP---HSPNNTLGEGSVQSNMQ 220
Query: 149 IPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKW 208
PTS R P +SD SR + SP D R PSE+ SFS+S+KS+
Sbjct: 221 QPTSSHRR--QVSPSASDS--------NSRSLNQSSPSDQDR-AGPSELQSFSDSLKSRL 269
Query: 209 SAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKR 268
+A S RYKESISK TR+ K+R SRNTS+ +L EV+RE+SAGIA V++M++RL++ K
Sbjct: 270 NAVSTRYKESISKNTRNWKDRFFSRNTSMADLGSEVKREVSAGIATVSRMMDRLEM--KE 327
Query: 269 SGTPAPSSANAG 280
+ P +S + G
Sbjct: 328 NSRPDTASVSNG 339
>gi|356557897|ref|XP_003547246.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
Length = 419
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 182/318 (57%), Gaps = 41/318 (12%)
Query: 18 QCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIA-SAAPVTFPEDFDN 76
C++ S+RSKECPICWQ LK+P CQELLAA+E+++ R +A S AP+ ++
Sbjct: 121 NCLMNRSKRSKECPICWQSLALKDPDCQELLAAVEAQKRMILRNLANSRAPLG---QLND 177
Query: 77 GPD--GTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAATASLMLPTN 134
G D DYD + R+ + RY +E +R P S+V+ +SS + L T
Sbjct: 178 GHDFCSDDPDYDQIMRRLDSAVKRVRYVPGQERKRSPGAGTSKVLGNSSMHVSGLQ--TT 235
Query: 135 ANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNP 194
+ S + +P++V + QPP+ + TN PDS RRPN
Sbjct: 236 LTTSPSGGSSPASGVPSTV-----SIQPPALN--TN---------------PDSARRPNT 273
Query: 195 SEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAG 254
S++FSF +S KSK+S+ASARYKESISKGTR LKE+LL+ N SVKELSK VQREM+AGIAG
Sbjct: 274 SDMFSFPKSFKSKFSSASARYKESISKGTRDLKEKLLAHNVSVKELSKGVQREMNAGIAG 333
Query: 255 VAKMIERLDLASKRSGTP---APSSANAGGPSSALFKGKGVQESAM----NRRSAEVAPD 307
V +MIERLDL+SKRS +P S A + PSS K V+E+ + ++ S D
Sbjct: 334 VVRMIERLDLSSKRSSSPLIAVHSGATSDFPSSR----KPVEENGIGGSPSKESGGAVHD 389
Query: 308 IMSAAPSNVTGTNSAQLE 325
+ S VT S Q E
Sbjct: 390 VSSDVLPLVTNMQSFQTE 407
>gi|218185965|gb|EEC68392.1| hypothetical protein OsI_36548 [Oryza sativa Indica Group]
Length = 444
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 157/301 (52%), Gaps = 44/301 (14%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER ++ +
Sbjct: 78 LTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNVRTNQTRNTTI 137
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAA------RYFRRREMQR---------- 109
P DF+ + ++E RI+QHLAAA + RRE R
Sbjct: 138 FHHPALGDFEVQHLPVVGNDAELEERILQHLAAAAAMGRSHHLGRREGHRGRSGSHGRPQ 197
Query: 110 ------YPALDASQV---------VDSSS-----AATASLMLPTNANSPNFCHGSSDTDI 149
+P + ++ VD+ S A SL T+ + N G D
Sbjct: 198 FLVFSSHPNMPSAGSVSSSSVQGEVDNESSPVHTAGELSLHASTHEEAGNQSPGMLTYDA 257
Query: 150 PTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWS 209
+ S+ N+ P SS NR R QS P + R PS++ SFS+S+KS+ +
Sbjct: 258 DQDAVVSSGNSTPVSSPRFFNR------RHSTGQSTPVNNDRAGPSDLQSFSDSLKSRLN 311
Query: 210 AASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRS 269
A S +YKESI+K TR KERL SRN+SV +L EV+RE++AGIA V++M+ERL+ +
Sbjct: 312 AVSMKYKESITKSTRGWKERLFSRNSSVADLGSEVRREVNAGIASVSRMMERLETRGSNN 371
Query: 270 G 270
G
Sbjct: 372 G 372
>gi|357156385|ref|XP_003577438.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Brachypodium
distachyon]
Length = 387
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 162/311 (52%), Gaps = 48/311 (15%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKHE+HLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ +
Sbjct: 48 LTGCKHEFHLQCILEWCQRSSQCPMCWQPITMKDPTSQELLEAVERERNMRTNQTRNTTI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAA------RYFRRREMQRYPALDASQ-- 117
P DF+ + ++E RI+QHLAAA + RRE QR ++ ++
Sbjct: 108 FHHPALGDFEVQHLPVVGNDAELEERILQHLAAAAAMGRSHHLGRREGQRGRSVSNNRPQ 167
Query: 118 -------------------VVDSSSAATASLMLPT------NANS----PNFCHGSSDTD 148
A+ +++PT ANS N G D
Sbjct: 168 FLVFSAHPNTTSAGSISSSSAQGEGASDLRILVPTAGDLSPRANSIEEAGNQSPGMLTYD 227
Query: 149 IPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKW 208
+ S+ N+ P SS NR R QS PD R PS++ SFS+S+KS+
Sbjct: 228 AEQDAVVSSGNSTPVSSPRFFNR------RHSTGQSTPD---RAGPSDLQSFSDSLKSRL 278
Query: 209 SAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKR 268
+A S +YKESI+K TR KERL SRN+SV +L EV+RE++ GIA V++M+ERL+
Sbjct: 279 NAVSTKYKESITKSTRGWKERLFSRNSSVSDLGSEVRREVNNGIASVSRMMERLETRGSS 338
Query: 269 SGTPAPSSANA 279
G+ +P+S+ +
Sbjct: 339 RGSDSPTSSTS 349
>gi|224058945|ref|XP_002299657.1| predicted protein [Populus trichocarpa]
gi|222846915|gb|EEE84462.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 164/304 (53%), Gaps = 34/304 (11%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 50 VTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPMSQELLEAVEQERSFRLNPSRNATI 109
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAA 125
P DF+ + ++E R++QHL AA RR + R + + S+
Sbjct: 110 FHHPALGDFELQHLPVGANDAELEERLIQHLTAAAAMGRRRIARR---EGQRNRSSAQGR 166
Query: 126 TASLMLPTNAN-SPNFCHGSSDTD---IPTSVIR-STDNAQPPSS--------------D 166
L+L + N SP SS T P S I +T ++QP S D
Sbjct: 167 PQFLVLSSQPNGSPAGSISSSPTQREGEPVSAITIATPSSQPLESSLQLITPLSSEALAD 226
Query: 167 PG---------TNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKE 217
P TN+ QS P+S R PS++ SFSES+KSK++A S RYKE
Sbjct: 227 PCSASASGSSFTNQHANSMDNRSPNQSSPNSQDRAGPSDLQSFSESIKSKFNAVSMRYKE 286
Query: 218 SISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDL-ASKRSGTPAPSS 276
SISK TR KER +RNT++ +L EV+RE++AGIA V++M+E L+ R+GT + S+
Sbjct: 287 SISKSTRGWKERFFTRNTTMADLGSEVRREVNAGIATVSRMMESLETRDDSRTGTSSVSN 346
Query: 277 ANAG 280
+ G
Sbjct: 347 SVDG 350
>gi|32493110|gb|AAP85546.1| putative RING-H2 zinc finger protein [Oryza sativa Japonica Group]
Length = 394
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 156/294 (53%), Gaps = 44/294 (14%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER ++ +
Sbjct: 48 LTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNVRTNQTRNTTI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAA------RYFRRREMQR---------- 109
P DF+ + ++E RI+QHLAAA + RRE R
Sbjct: 108 FHHPALGDFEVQHLPVVGNDAELEERILQHLAAAAAMGRSHHLGRREGHRGRSGSHGRPQ 167
Query: 110 ------YPALDASQV---------VDSSSA---ATASLMLPTNAN--SPNFCHGSSDTDI 149
+P + ++ VD+ S+ T L L N + + N G D
Sbjct: 168 FLVFSSHPNMPSAGSVSSSSVQGEVDNESSPVHTTGELSLHANTHEEAGNQSPGMLTYDA 227
Query: 150 PTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWS 209
+ S+ N+ P SS NR R QS P + R PS++ SFS+S+KS+ +
Sbjct: 228 DQDAVVSSGNSTPVSSPRFFNR------RHSTGQSTPVNNDRAGPSDLQSFSDSLKSRLN 281
Query: 210 AASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
A S +YKESI+K TR KERL SRN+SV +L EV+RE++AGIA V++M+ERL+
Sbjct: 282 AVSMKYKESITKSTRGWKERLFSRNSSVADLGSEVRREVNAGIASVSRMMERLE 335
>gi|356543652|ref|XP_003540274.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
Length = 401
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 159/296 (53%), Gaps = 48/296 (16%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 59 VTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATI 118
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQRYPALDASQVV 119
P DF+ D+E RI+QHLAA AR+ RRE QR +
Sbjct: 119 FHHPTLGDFELQHLPVGASDADLEERIIQHLAAAAAMGRARHIARREGQRNRS------- 171
Query: 120 DSSSAATASLMLPTNANSPNFCHGSS-------DTDIPTSVIRST--------DNAQ--- 161
S+ L+ TN NSP SS D IPT + + +++Q
Sbjct: 172 -SAQGRPHFLVFSTNPNSPPMAPASSSPSQRGDDEPIPTIAVANLSPTPATGEESSQLTL 230
Query: 162 -PP------------SSDPGTNRDGP-FKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSK 207
PP S+ T+ G + +R QS P S R PSE+ SFSES+KSK
Sbjct: 231 VPPIQAEQVSASGSGSTALATDHQGSSYNNRRSPNQSSPSSQDRAGPSELQSFSESLKSK 290
Query: 208 WSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
+A S RYKESISK TR KER SRN ++ +L EV+RE++AGIA V++M+ERL+
Sbjct: 291 LNAVSTRYKESISKSTRGWKERWFSRNNTMSDLGSEVRREVNAGIATVSRMMERLE 346
>gi|255637379|gb|ACU19018.1| unknown [Glycine max]
Length = 401
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 158/296 (53%), Gaps = 48/296 (16%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 59 VTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATI 118
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQRYPALDASQVV 119
P DF+ D+E RI+QHLAA AR+ RRE QR +
Sbjct: 119 FHHPTLGDFELQHLPVGASDADLEERIIQHLAAAAAMGRARHIARREGQRNRS------- 171
Query: 120 DSSSAATASLMLPTNANSPNFCHGSS-------DTDIPTSVIRST--------DNAQ--- 161
S+ L TN NSP SS D IPT + + +++Q
Sbjct: 172 -SAQGRPHFLAFSTNPNSPPMAPASSSPSQRGDDEPIPTIAVANLSPTPATGEESSQLTL 230
Query: 162 -PP------------SSDPGTNRDGP-FKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSK 207
PP S+ T+ G + +R QS P S R PSE+ SFSES+KSK
Sbjct: 231 VPPIQAEQVSASGSGSTALATDHQGSSYNNRRSPNQSSPSSQDRAGPSELQSFSESLKSK 290
Query: 208 WSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
+A S RYKESISK TR KER SRN ++ +L EV+RE++AGIA V++M+ERL+
Sbjct: 291 LNAVSTRYKESISKSTRGWKERWFSRNNTMSDLGSEVRREVNAGIATVSRMMERLE 346
>gi|108864534|gb|ABA94392.2| RING-H2 finger protein RHF2a, putative, expressed [Oryza sativa
Japonica Group]
gi|222616175|gb|EEE52307.1| hypothetical protein OsJ_34320 [Oryza sativa Japonica Group]
Length = 394
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 157/298 (52%), Gaps = 52/298 (17%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER ++ +
Sbjct: 48 LTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNVRTNQTRNTTI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAA------RYFRRREMQR---------- 109
P DF+ + ++E RI+QHLAAA + RRE R
Sbjct: 108 FHHPALGDFEVQHLPVVGNDAELEERILQHLAAAAAMGRSHHLGRREGHRGRSGSHGRPQ 167
Query: 110 ------YPALDASQV---------VDSSSA---ATASLMLPTNAN------SPNFCHGSS 145
+P + ++ VD+ S+ T L L N + SP +
Sbjct: 168 FLVFSSHPNMPSAGSVSSSSVQGEVDNESSPVHTTGELSLHANTHEEAGNQSPGMLTYDA 227
Query: 146 DTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVK 205
D D + S+ N+ P SS NR R QS P + R PS++ SFS+S+K
Sbjct: 228 DQD----AVVSSGNSTPVSSPRFFNR------RHSTGQSTPVNNDRAGPSDLQSFSDSLK 277
Query: 206 SKWSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
S+ +A S +YKESI+K TR KERL SR++SV +L EV+RE++AGIA V++M+ERL+
Sbjct: 278 SRLNAVSMKYKESITKSTRGWKERLFSRHSSVADLGSEVRREVNAGIASVSRMMERLE 335
>gi|356550038|ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
Length = 398
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 155/296 (52%), Gaps = 48/296 (16%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 56 VTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATI 115
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQRYPALDASQVV 119
P DF+ D+E RI+QHLAA AR+ RRE QR +
Sbjct: 116 FHHPTLGDFELQHLPVGASDADLEERIIQHLAAAAAMGRARHVARREGQRNRS------- 168
Query: 120 DSSSAATASLMLPTNANSPNFCHGSSD-----TDIPTSVI----------RSTDNAQPPS 164
S+ L+ T+ NSP SS D PT I +++QP
Sbjct: 169 -SAQGRQHFLVFSTHPNSPPMAPASSSPSQRGDDEPTPTIDVANLSPTPATGEESSQPTL 227
Query: 165 SDP----------------GTNRDGP-FKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSK 207
P T+ G + +R QS P S R PSE+ SFSES+KSK
Sbjct: 228 VSPVQAEQVSASGSGTTALATDHQGSSYNNRRSPNQSSPSSQDRAGPSELQSFSESLKSK 287
Query: 208 WSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
+A S RYKESISK TR KER SRN ++ +L EV+RE++AGIA V++M+ERL+
Sbjct: 288 LNAVSTRYKESISKSTRGWKERWFSRNNTMSDLGSEVRREVNAGIATVSRMMERLE 343
>gi|449437506|ref|XP_004136533.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Cucumis sativus]
Length = 371
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 157/312 (50%), Gaps = 51/312 (16%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+CKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER ++ P+ + A
Sbjct: 45 VTACKHEFHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRATPVRNTAV 104
Query: 68 VTFPE----DFDNGPDGTYFDYDDMEARIMQHLAAARYFRRRE----------------- 106
P + + P G + ++E RI+QHLAAA R
Sbjct: 105 FHHPALGNFELQHLPLG--VNNAELEERIIQHLAAAAAMGRTHHIGRREGRSRSSSHGRP 162
Query: 107 ----MQRYPALDASQVVDSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQP 162
+P V S + + + +SP G D P+ I AQ
Sbjct: 163 HFLVFSTHPGGPPEHVSASGVHTEPAGITVASPSSPLTPRG----DEPSQHI-----AQF 213
Query: 163 PS--------SDPGTN-----RDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWS 209
PS S G+N R R+ SP + R PSE SFSES+KS+ +
Sbjct: 214 PSIQTDHVSRSASGSNFSASRRGASSGIRISTSDSPSPNLDRAGPSEFQSFSESLKSRLN 273
Query: 210 AASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRS 269
A S RYKESISK TR KERL SRNTS+ EL EV+RE++AGIA V++M++RL+ ++
Sbjct: 274 AVSTRYKESISKSTRGWKERLFSRNTSMSELGSEVRREVNAGIASVSRMMQRLE--TRED 331
Query: 270 GTPAPSSANAGG 281
G S GG
Sbjct: 332 GVTNQGSNEQGG 343
>gi|357453313|ref|XP_003596933.1| RING finger protein [Medicago truncatula]
gi|355485981|gb|AES67184.1| RING finger protein [Medicago truncatula]
Length = 382
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 160/297 (53%), Gaps = 22/297 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 52 VTSCKHEFHLQCILEWCQRSSQCPMCWQSISLKDPTGQELLEAVERERNIRFNPTRNATI 111
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQH------LAAARYFRRREMQRY--PALDASQ 117
P DF+ + D+E RI+QH + AR+ RRE QR A Q
Sbjct: 112 FHHPTLGDFELQHLPVGANDADLEERILQHFAAAAAMGRARHIARREGQRNRSSAQGRPQ 171
Query: 118 VVDSSSAATASLMLPTNANSPNFCHG-----SSDTDIPTSVIRSTDNAQPPSSDPGT--- 169
+ S+ + M P +++ P G + + +++ Q +S G+
Sbjct: 172 YMVFSAHPNSPPMAPASSSPPQRGDGEQTPATGEEPPQLTLVPPVQTDQVSASGSGSAAL 231
Query: 170 ---NRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSL 226
N + SR QS P S R PSE+ SFSES+KSK +A S RYKESISK TR
Sbjct: 232 ATDNLGLSYNSRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTRGW 291
Query: 227 KERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDL-ASKRSGTPAPSSANAGGP 282
KER SR + + +L EV+RE++AGIA V++M+ERL+ + RS + S A GP
Sbjct: 292 KERWFSRTSPMSDLGSEVKREVNAGIATVSRMMERLETRDNNRSSSDTAPSNLADGP 348
>gi|115455811|ref|NP_001051506.1| Os03g0788800 [Oryza sativa Japonica Group]
gi|50355736|gb|AAT75261.1| putative RING zinc finger protein [Oryza sativa Japonica Group]
gi|108711467|gb|ABF99262.1| zinc finger family protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113549977|dbj|BAF13420.1| Os03g0788800 [Oryza sativa Japonica Group]
gi|215701192|dbj|BAG92616.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 372
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 161/305 (52%), Gaps = 33/305 (10%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHEYHLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ + +AA
Sbjct: 45 VTSCKHEYHLQCILEWCQRSSQCPMCWQPISMKDPMSQELLEAVEQERNIRANRLNTAAV 104
Query: 68 VTFP--EDFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAA 125
P DF+ P G D ++E RI+QHLAAA RR R+ D + S +
Sbjct: 105 FHHPVLGDFEV-PVGA--DDAELEERIIQHLAAAAAMRRS--HRHGRRDGHRSRSGSHSR 159
Query: 126 TASLMLPTNANSPNF-CHGSSDTD------------IPTSVIRSTDNAQPPS-------- 164
++ N P H SS D P + + + D
Sbjct: 160 PQIVVFSRNEAIPGGSLHASSGQDEDHEQSSDLGSAHPFAALAAVDQGHMSGGSQLYVGH 219
Query: 165 SDPGTN----RDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESIS 220
SD G + D SR QS P + PS++ SFS++++S+ +AS +YK+SI+
Sbjct: 220 SDQGASNPSLHDERAMSRTSENQSAPVNQDTAGPSDLQSFSDTLRSRLQSASMKYKDSIT 279
Query: 221 KGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAG 280
K TR KER SR+ ++ L EV+RE++AGIA V++M+ERL+ +G A +A+A
Sbjct: 280 KSTRGWKERWFSRSNTISGLGTEVRREVNAGIAAVSRMMERLETKDD-TGPSAVPAASAC 338
Query: 281 GPSSA 285
PS A
Sbjct: 339 SPSDA 343
>gi|222625937|gb|EEE60069.1| hypothetical protein OsJ_12884 [Oryza sativa Japonica Group]
Length = 404
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 161/305 (52%), Gaps = 33/305 (10%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHEYHLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ + +AA
Sbjct: 45 VTSCKHEYHLQCILEWCQRSSQCPMCWQPISMKDPMSQELLEAVEQERNIRANRLNTAAV 104
Query: 68 VTFP--EDFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAA 125
P DF+ P G D ++E RI+QHLAAA RR R+ D + S +
Sbjct: 105 FHHPVLGDFEV-PVGA--DDAELEERIIQHLAAAAAMRRS--HRHGRRDGHRSRSGSHSR 159
Query: 126 TASLMLPTNANSPNF-CHGSSDTD------------IPTSVIRSTDNAQPPS-------- 164
++ N P H SS D P + + + D
Sbjct: 160 PQIVVFSRNEAIPGGSLHASSGQDEDHEQSSDLGSAHPFAALAAVDQGHMSGGSQLYVGH 219
Query: 165 SDPGTN----RDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESIS 220
SD G + D SR QS P + PS++ SFS++++S+ +AS +YK+SI+
Sbjct: 220 SDQGASNPSLHDERAMSRTSENQSAPVNQDTAGPSDLQSFSDTLRSRLQSASMKYKDSIT 279
Query: 221 KGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAG 280
K TR KER SR+ ++ L EV+RE++AGIA V++M+ERL+ +G A +A+A
Sbjct: 280 KSTRGWKERWFSRSNTISGLGTEVRREVNAGIAAVSRMMERLETKDD-TGPSAVPAASAC 338
Query: 281 GPSSA 285
PS A
Sbjct: 339 SPSDA 343
>gi|218193876|gb|EEC76303.1| hypothetical protein OsI_13825 [Oryza sativa Indica Group]
Length = 404
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 161/305 (52%), Gaps = 33/305 (10%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHEYHLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ + +AA
Sbjct: 45 VTSCKHEYHLQCILEWCQRSSQCPMCWQPISMKDPMSQELLEAVEQERNIRANRLNTAAV 104
Query: 68 VTFP--EDFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAA 125
P DF+ P G D ++E RI+QHLAAA RR R+ D + S +
Sbjct: 105 FHHPVLGDFEV-PVGA--DDAELEERIIQHLAAAAAMRRS--HRHGRRDGHRSRSGSHSR 159
Query: 126 TASLMLPTNANSPNF-CHGSSDTD------------IPTSVIRSTDNAQPPS-------- 164
++ N P H SS D P + + + D
Sbjct: 160 PQIVVFSRNEAIPGGSLHASSGQDEDHEQSSDLGSAHPFAALAAIDQGHMGGGSQLYVGH 219
Query: 165 SDPGTN----RDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESIS 220
SD G + D SR QS P + PS++ SFS++++S+ +AS +YK+SI+
Sbjct: 220 SDQGASNPSLHDERAMSRTSENQSAPVNQDTAGPSDLQSFSDTLRSRLQSASMKYKDSIT 279
Query: 221 KGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAG 280
K TR KER SR+ ++ L EV+RE++AGIA V++M+ERL+ +G A +A+A
Sbjct: 280 KSTRGWKERWFSRSNTISGLGTEVRREVNAGIAAVSRMMERLETKDD-TGPSAVPAASAC 338
Query: 281 GPSSA 285
PS A
Sbjct: 339 SPSDA 343
>gi|225436087|ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A [Vitis vinifera]
gi|296084011|emb|CBI24399.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 163/308 (52%), Gaps = 50/308 (16%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 50 VTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERTFRFNPSRNATI 109
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQR---------- 109
P DF+ + ++E RI+QHLAA AR+ RRE QR
Sbjct: 110 FHHPTLGDFELQHLPVGANDAELEERIIQHLAAAAAMGRARHIARREGQRTRSSAQGRPQ 169
Query: 110 ------YPALDASQVVDSS----------SAATASL--MLPTNANSPNFCHGSSDTDIPT 151
+P+ + SS A TA++ LPT G + + T
Sbjct: 170 FLVFSAHPSTPQAGPASSSPAQRGEDEPAPAITAAMPSSLPTAV-------GEESSRLTT 222
Query: 152 SVIRSTDNAQPPSSDPG-----TNRDGP-FKSRVFFRQSPPDSPRRPNPSEVFSFSESVK 205
S + S+ + +S G TN+ G +R QS P + PSE SFSE++K
Sbjct: 223 SQL-SSQAEEITASASGSIIHTTNQHGTSSNNRRSPGQSLPSGQDKAGPSEFQSFSETLK 281
Query: 206 SKWSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLA 265
S+++A S RYKESISK TR KERL SRNTS+ ++ +V+RE++AGIA V++M+E L+
Sbjct: 282 SRFNAVSMRYKESISKSTRGWKERLFSRNTSMADIGSDVRREVNAGIATVSRMMEHLETR 341
Query: 266 SKRSGTPA 273
TP+
Sbjct: 342 DNSRTTPS 349
>gi|116788843|gb|ABK25021.1| unknown [Picea sitchensis]
Length = 422
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 175/351 (49%), Gaps = 52/351 (14%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESER-LSKSRPIASAA 66
VTSCKHEYHLQCILEW+QRSK+CP+CWQ LK+PA QELL A+E ER L +RP A
Sbjct: 42 VTSCKHEYHLQCILEWAQRSKQCPMCWQFLSLKDPASQELLEAVEQERTLRMNRP--QNA 99
Query: 67 PVTFP----EDFDNGPDGTYFDYDDMEARIMQHL------AAARYFRRREM--QRYPALD 114
P+ FP ED D D ++E RIMQHL AR F RRE R A
Sbjct: 100 PI-FPHISFEDLDLHNVRINSDDPELEERIMQHLAAAAAMGRARRFTRRETSHDRASAQG 158
Query: 115 ASQVVDSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQ-----PP------ 163
SQ++ SS LP + ++ +S P + + + + Q PP
Sbjct: 159 HSQILLFSSHPNVP-PLPDHTSAEGGHSPTSTVASPITPLAAVEEEQLQRPSPPMQVDSD 217
Query: 164 ---------SSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASAR 214
+S R F R Q + R SE+ SFSES+KS++++ S+R
Sbjct: 218 SQSIGSASMTSQDVDGRSSSFPHRNIAGQPSMEYHERSRLSEMQSFSESLKSRFTSMSSR 277
Query: 215 YKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSG---- 270
KES +K TR +ERL +RN++V + ++E Q+E+S GIAGV +M+E LD + G
Sbjct: 278 CKESFAKATRGFRERLSARNSAVTDHAQEAQQEVSDGIAGVTRMMEFLDTNGRNRGGIIS 337
Query: 271 -----------TPAPSSANAGGPSSALFKGKGVQESAMNRRSAEVAPDIMS 310
PA + P+ GV + S+EVAP +++
Sbjct: 338 ISDDMEGHSVLAPARQQIDDDHPNMCSGNNSGVNLCTASPGSSEVAPQLLN 388
>gi|77551596|gb|ABA94393.1| RING-H2 finger protein RHF2a, putative, expressed [Oryza sativa
Japonica Group]
Length = 370
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 153/292 (52%), Gaps = 64/292 (21%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P+
Sbjct: 48 LTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERER---NLPVV---- 100
Query: 68 VTFPEDFDNGPDGTYFDYDDMEARIMQHLAAA------RYFRRREMQR------------ 109
G D ++E RI+QHLAAA + RRE R
Sbjct: 101 ---------GNDA------ELEERILQHLAAAAAMGRSHHLGRREGHRGRSGSHGRPQFL 145
Query: 110 ----YPALDASQV---------VDSSSA---ATASLMLPTNAN--SPNFCHGSSDTDIPT 151
+P + ++ VD+ S+ T L L N + + N G D
Sbjct: 146 VFSSHPNMPSAGSVSSSSVQGEVDNESSPVHTTGELSLHANTHEEAGNQSPGMLTYDADQ 205
Query: 152 SVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAA 211
+ S+ N+ P SS NR R QS P + R PS++ SFS+S+KS+ +A
Sbjct: 206 DAVVSSGNSTPVSSPRFFNR------RHSTGQSTPVNNDRAGPSDLQSFSDSLKSRLNAV 259
Query: 212 SARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
S +YKESI+K TR KERL SR++SV +L EV+RE++AGIA V++M+ERL+
Sbjct: 260 SMKYKESITKSTRGWKERLFSRHSSVADLGSEVRREVNAGIASVSRMMERLE 311
>gi|194701282|gb|ACF84725.1| unknown [Zea mays]
gi|195619558|gb|ACG31609.1| zinc finger, RING-type [Zea mays]
gi|238010776|gb|ACR36423.1| unknown [Zea mays]
gi|413925335|gb|AFW65267.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413925336|gb|AFW65268.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
gi|413925337|gb|AFW65269.1| putative RING zinc finger domain superfamily protein isoform 3 [Zea
mays]
Length = 396
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/313 (38%), Positives = 166/313 (53%), Gaps = 55/313 (17%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKHE+HLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ +
Sbjct: 48 LTGCKHEFHLQCILEWCQRSSQCPMCWQPITMKDPTSQELLEAVERERNIRTNQTRNTTI 107
Query: 68 VTFPE--DFD--NGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQRYPA----- 112
P DF+ + P G + ++E RI+QHLAA A + RRE R +
Sbjct: 108 FHHPALGDFELQHLPVG---NDAELEERILQHLAAAAAMGRAHHLGRREGHRGRSGSHGR 164
Query: 113 ---LDASQVVDSSSAATAS----LMLPTNANSP-------------------NFCHGSSD 146
L S +S SA T S M N ++P N G
Sbjct: 165 PHFLVFSTQPNSPSAGTISSSSAHMEGENDSNPATPRASESSPRAIRIGEVGNQSPGMLT 224
Query: 147 TDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKS 206
D + S+ N+ P SS NR R QS PD R PS++ SFS+S+KS
Sbjct: 225 YDAEQDAVVSSGNSTPVSSPRFFNR------RHSTGQSTPD---RAGPSDIQSFSDSLKS 275
Query: 207 KWSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDL-- 264
+ +A S +YKESI+K TR KERL SRN+SV +L EV+RE++AGIA V++M+ERL+
Sbjct: 276 RLNAVSMKYKESITKSTRGWKERLFSRNSSVADLGSEVRREVNAGIASVSRMMERLETRG 335
Query: 265 ASKRSGTPAPSSA 277
S+ S +PA S++
Sbjct: 336 NSRTSDSPAASTS 348
>gi|449521707|ref|XP_004167871.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Cucumis sativus]
Length = 371
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 159/312 (50%), Gaps = 51/312 (16%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+CKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER ++ P+ + A
Sbjct: 45 VTACKHEFHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRATPVRNTAV 104
Query: 68 VTFPE----DFDNGPDGTYFDYDDMEARIMQHL-AAARYFRRREMQR------------- 109
P + + P G + ++E RI+QHL AAA R + R
Sbjct: 105 FHHPALGNFELQHLPLG--VNNAELEERIIQHLAAAAAMGRTHHIGRREGRSRSSSHGRP 162
Query: 110 -------YPALDASQVVDSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQP 162
+P V S + + + +SP G D P+ I AQ
Sbjct: 163 HFLVFSTHPGGPPEHVSASGVHTEPAGITVASPSSPLTPRG----DEPSQHI-----AQF 213
Query: 163 PS--------SDPGTN-----RDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWS 209
PS S G+N R ++ SP + R PSE SFSES+KS+ +
Sbjct: 214 PSIQTDHVSRSASGSNFSASRRGASSGIQISTSDSPSPNLDRAGPSEFQSFSESLKSRLN 273
Query: 210 AASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRS 269
A S RYKESISK TR KERL SRNTS+ EL EV+RE++AGIA V++M++RL+ ++
Sbjct: 274 AVSTRYKESISKSTRGWKERLFSRNTSMSELGSEVRREVNAGIASVSRMMQRLE--TRED 331
Query: 270 GTPAPSSANAGG 281
G S GG
Sbjct: 332 GVTNQGSNEQGG 343
>gi|212276084|ref|NP_001130764.1| uncharacterized protein LOC100191868 [Zea mays]
gi|194690054|gb|ACF79111.1| unknown [Zea mays]
Length = 396
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/313 (38%), Positives = 166/313 (53%), Gaps = 55/313 (17%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKHE+HLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ +
Sbjct: 48 LTGCKHEFHLQCILEWCQRSSQCPMCWQPITMKDPTSQELLEAVERERNIRTNQTRNTTI 107
Query: 68 VTFPE--DFD--NGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQRYPA----- 112
P DF+ + P G + ++E RI+QHLAA A + RRE R +
Sbjct: 108 FHHPALGDFELQHLPVG---NDAELEERILQHLAAAAAMGRAHHLGRREGHRGRSGSHGR 164
Query: 113 ---LDASQVVDSSSAATAS----LMLPTNANSP-------------------NFCHGSSD 146
L S +S SA T S M N ++P N G
Sbjct: 165 PHFLVFSTQPNSPSAGTISSSSAHMEGENDSNPATPRASESSPRAIRIGEVGNQSPGMLT 224
Query: 147 TDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKS 206
D + S+ N+ P SS NR R QS PD R PS++ SFS+S+KS
Sbjct: 225 YDAQQDAVVSSGNSTPVSSPRFFNR------RHSTGQSTPD---RAGPSDIQSFSDSLKS 275
Query: 207 KWSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDL-- 264
+ +A S +YKESI+K TR KERL SRN+SV +L EV+RE++AGIA V++M+ERL+
Sbjct: 276 RLNAVSMKYKESITKSTRGWKERLFSRNSSVADLGSEVRREVNAGIASVSRMMERLETRG 335
Query: 265 ASKRSGTPAPSSA 277
S+ S +PA S++
Sbjct: 336 NSRTSDSPAASTS 348
>gi|357453317|ref|XP_003596935.1| RING finger protein [Medicago truncatula]
gi|355485983|gb|AES67186.1| RING finger protein [Medicago truncatula]
Length = 383
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 157/298 (52%), Gaps = 23/298 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 52 VTSCKHEFHLQCILEWCQRSSQCPMCWQSISLKDPTGQELLEAVERERNIRFNPTRNATI 111
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQH------LAAARYFRRREMQRY--PALDASQ 117
P DF+ + D+E RI+QH + AR+ RRE QR A Q
Sbjct: 112 FHHPTLGDFELQHLPVGANDADLEERILQHFAAAAAMGRARHIARREGQRNRSSAQGRPQ 171
Query: 118 VVDSSSAATASLMLPTNANSPNFCHGSSD----------TDIPTSVIRSTDNAQPPSSDP 167
+ S+ + M P +++ P G T +P + S+
Sbjct: 172 YMVFSAHPNSPPMAPASSSPPQRGDGEQTPATGEEPPQLTLVPPVQTDQVSASGSGSAAL 231
Query: 168 GTNRDGP--FKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRS 225
T+ G SR QS P S R PSE+ SFSES+KSK +A S RYKESISK TR
Sbjct: 232 ATDNLGLSYNSSRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTRG 291
Query: 226 LKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDL-ASKRSGTPAPSSANAGGP 282
KER SR + + +L EV+RE++AGIA V++M+ERL+ + RS + S A GP
Sbjct: 292 WKERWFSRTSPMSDLGSEVKREVNAGIATVSRMMERLETRDNNRSSSDTAPSNLADGP 349
>gi|242047490|ref|XP_002461491.1| hypothetical protein SORBIDRAFT_02g003480 [Sorghum bicolor]
gi|241924868|gb|EER98012.1| hypothetical protein SORBIDRAFT_02g003480 [Sorghum bicolor]
Length = 366
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 160/292 (54%), Gaps = 29/292 (9%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSC+HE+HLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ +
Sbjct: 47 VTSCRHEFHLQCILEWCQRSSQCPMCWQAISMKDPMSQELLEAVEEERNAQENHARTTTI 106
Query: 68 VTFP--EDFDNGPDGTYFDYDDMEARIMQHLAAARYFR------RREMQR----YPALDA 115
P DF+ D D ++E RI+QHLAAA R RRE +R
Sbjct: 107 FRHPLLGDFEVPVDA---DDAEIEERILQHLAAAAAIRRSHRHARREGRRSRSAAHGHGH 163
Query: 116 SQVV--DSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDG 173
QV+ ++ AT L + + H + T + + + + D+A+ ++D N
Sbjct: 164 QQVLFFPAAGEATPGGSLSSRSQQEGD-HEHASTVVSSPPLPTVDSAEETAADIPVNHTA 222
Query: 174 PFKS-------RVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSL 226
S V + QS P + PSE SFS+++KS+ + S +YK+SI+K TR
Sbjct: 223 SVNSPPVGSNDSVSWNQSSPVNQDEAGPSEAQSFSDTIKSRLQSVSTKYKDSITKSTRGW 282
Query: 227 KERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSAN 278
KER ++N+++ L E++RE++AGIA V++M+E+L+ R GT PSSA+
Sbjct: 283 KERWFTQNSTISNLGSEMRREVNAGIAAVSRMMEKLE---TRDGT-GPSSAS 330
>gi|255638511|gb|ACU19564.1| unknown [Glycine max]
Length = 380
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 149/281 (53%), Gaps = 27/281 (9%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+CKHE+HLQCILEW QRS +CP+CWQ L++ QELL A+E ER + P +AA
Sbjct: 48 VTNCKHEFHLQCILEWCQRSSQCPMCWQPISLRDATSQELLEAVELERSLRDTPSRNAAI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAA------RYFRRREMQRY--------- 110
P DF+ + D+E RI+QHL AA + RRE R
Sbjct: 108 FHHPTLGDFELQHLPMGVNEADIEERIIQHLTAAAAMRRSHHLSRREGHRTRPSAHGRPH 167
Query: 111 -------PALDASQVVDSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPP 163
P+ S S A + P+ + + SS IP V + +
Sbjct: 168 FLVYSTQPSAPPSAAGGGSEPAAIPVGSPSTPLTFDGNEQSSLQQIP-HVQTQSSSLTSA 226
Query: 164 SSDPGTNRDGPFK-SRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKG 222
S+ TN G R F S P S R PSE SFS+S++S+++A S RYK+SISKG
Sbjct: 227 STVSTTNLQGVHSDDRSFASHSFPASQDRAQPSEQ-SFSDSLRSRFNAVSMRYKDSISKG 285
Query: 223 TRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
TR KERL S N+S+ EL EV+RE++A IA V++++ERL+
Sbjct: 286 TRGWKERLFSPNSSMSELGSEVRRELNAKIASVSRLMERLE 326
>gi|356500563|ref|XP_003519101.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
Length = 380
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 149/281 (53%), Gaps = 27/281 (9%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+CKHE+HLQCILEW QRS +CP+CWQ L++ QELL A+E ER + P +AA
Sbjct: 48 VTNCKHEFHLQCILEWCQRSSQCPMCWQPISLRDATSQELLEAVELERSLRDTPSRNAAI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAA------RYFRRREMQRY--------- 110
P DF+ + D+E RI+QHL AA + RRE R
Sbjct: 108 FHHPTLGDFELQHLPMGVNEADIEERIIQHLTAAAAMRRSHHLSRREGHRTRPSAHGRPH 167
Query: 111 -------PALDASQVVDSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPP 163
P+ S S A + P+ + + SS IP V + +
Sbjct: 168 FLVYSTQPSAPPSAAGGGSEPAAIPVGSPSTPLTFDGNEQSSLQQIP-HVQTQSSSLTSA 226
Query: 164 SSDPGTNRDGPFK-SRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKG 222
S+ TN G R F S P S R PSE SFS+S++S+++A S RYK+SISKG
Sbjct: 227 STVSTTNLQGVHSDDRSFASHSFPASQDRAQPSEQ-SFSDSLRSRFNAVSMRYKDSISKG 285
Query: 223 TRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
TR KERL S N+S+ EL EV+RE++A IA V++++ERL+
Sbjct: 286 TRGWKERLFSPNSSMSELGSEVRRELNAKIASVSRLMERLE 326
>gi|326501720|dbj|BAK02649.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 438
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 157/302 (51%), Gaps = 42/302 (13%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKHE+HLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ +
Sbjct: 96 LTGCKHEFHLQCILEWCQRSSQCPMCWQPISMKDPTSQELLEAVERERNIRTNQTRNTTI 155
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAA------RYFRRREMQRYPALDASQVV 119
P DF+ + ++E RI+QHLAA+ RRE QR + S
Sbjct: 156 FHHPALGDFEVQHLPVVGNDAELEERILQHLAASAAMGRSHQHGRREGQRNRS--GSHGR 213
Query: 120 DSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDP----GTNRDG-- 173
+A P+ + S + G D+ V R D PP ++P G G
Sbjct: 214 PQFFVFSAHPNTPSGSVSSSSAQGEGADDLRILVPRVGD--LPPHANPIEEAGNQSPGVL 271
Query: 174 ----------------PFKSRVFFR------QSPPDSPRRPNPSEVFSFSESVKSKWSAA 211
P S FF QS P R PS+V SFS+S+KS+ +A
Sbjct: 272 TYDAEQDAVVSSGNSTPVSSPRFFNRRHSSGQSTPVGNDRAGPSDVQSFSDSLKSRLNAV 331
Query: 212 SARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGT 271
S++YKESI+K TR KERL SR++SV +L EV+RE++ GIA V++M+ERL+ ++ SG
Sbjct: 332 SSKYKESITKSTRGWKERLFSRSSSVSDLGSEVRREVNNGIASVSRMMERLE--TRGSGR 389
Query: 272 PA 273
P+
Sbjct: 390 PS 391
>gi|224091469|ref|XP_002309263.1| predicted protein [Populus trichocarpa]
gi|222855239|gb|EEE92786.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 150/293 (51%), Gaps = 44/293 (15%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+CKHE+HLQCILEW QRS ECP+C + LK+P QEL A+E ER ++ P +A
Sbjct: 50 VTNCKHEFHLQCILEWCQRSSECPMCLRSISLKDPTSQELFEAVERERKIRAAPSRNATI 109
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAAR------YFRRREMQR---------- 109
P DF+ ++E RI+QHLAAA +F R QR
Sbjct: 110 FHHPTLGDFELQHLPVGVSDSELEERIIQHLAAAAAMGRTGHFGRGGGQRNRSSPHGRPH 169
Query: 110 ------YPALDASQVVDSS-------------SAATASLMLPTNANSPNFCHGSSDTDIP 150
+P S V SS S A+ S L + + P+ +P
Sbjct: 170 FLVFSTHPGAQPSGHVSSSLSQLGRENEPAAGSVASPSTPLTSVEDEPS----QQTLQLP 225
Query: 151 TSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSA 210
+ TD + S + F +R QS P + R PSE SFS S+KS+ +A
Sbjct: 226 PIL---TDQSSSASGSTVMRQGLSFNNRSTSSQSAPPNQDRAGPSEFQSFSVSLKSRLNA 282
Query: 211 ASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
S RYKESIS+ TR K+RL SRN+SV +L EV+R+++AGIA V++M+ERL+
Sbjct: 283 VSMRYKESISRSTRGWKDRLFSRNSSVSDLGSEVRRDVNAGIATVSRMMERLE 335
>gi|356572652|ref|XP_003554481.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
Length = 389
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 151/289 (52%), Gaps = 39/289 (13%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+CKHE+HLQCILEW QRS +CPICWQ LK+P QEL A+E ER ++ P +AA
Sbjct: 51 VTTCKHEFHLQCILEWCQRSSQCPICWQPISLKDPTSQELFEAVEQERSWRATPSRNAAI 110
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAA 125
P DF+ + D E RI+QHLAAA RR + + + Q S
Sbjct: 111 FHHPAFGDFELQHLRMNANDADFEERIIQHLAAAATMRR--VNQLGRREGQQTRSSPHVH 168
Query: 126 TASLMLPTNANSPN-----FCHGSSDTDIPTSVIRSTDNAQPPSSDP------------- 167
L+ +P+ G +D PT++ + +A P +SD
Sbjct: 169 PHFLVFSNQPIAPSSGLDPVSRGEND---PTAIPNRSPSA-PITSDGNEASQQILHLQTQ 224
Query: 168 -----------GTNRDGPFKS-RVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARY 215
TNR G + + R +S P R SE+ SFS+S++S+ +A S RY
Sbjct: 225 SSSSASGSPVMATNRQGIYSNDRGSTARSSPVVQDRAESSELQSFSDSLRSRLNAVSMRY 284
Query: 216 KESISKGTRSLKERLLSRNTSVKELSKEV-QREMSAGIAGVAKMIERLD 263
KESISKGTR KERL S ++S+ EL E +REM AGIA V++++E L+
Sbjct: 285 KESISKGTRGWKERLFSHSSSMSELGSETRRREMKAGIASVSRLMESLE 333
>gi|255566215|ref|XP_002524095.1| protein binding protein, putative [Ricinus communis]
gi|223536663|gb|EEF38305.1| protein binding protein, putative [Ricinus communis]
Length = 378
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 155/289 (53%), Gaps = 47/289 (16%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+CKHEYHLQCILEW QRS +CP+C Q LK+P+ QEL A+E ER ++ P +A
Sbjct: 51 VTNCKHEYHLQCILEWCQRSSDCPMCLQPISLKDPSSQELFEAVERERKFRAAPSRNATI 110
Query: 68 VTFPE--DFD--NGPDGTYFDYDDMEARIMQHLAAA------RYFRRREMQRYPALDASQ 117
P DF+ + P G D+E RI+QHLAAA +F RRE R
Sbjct: 111 FRHPTLGDFELQHLPVGA--SDSDLEERIIQHLAAAAAMGRGHHFGRREGHRNR------ 162
Query: 118 VVDSSSAATASLMLPTNANSPNFCHGS-------------SDT----DIP------TSVI 154
SS L+ T+ ++P+ H S SDT +P SV+
Sbjct: 163 --QSSHGRPHFLVFSTHPSAPSSGHVSSSLAQVGGENEQASDTVTSPSVPLAYRGNVSVV 220
Query: 155 RSTDNAQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASAR 214
++ S+ N G R SPP + R PSE SFS+S+KS+ +A S R
Sbjct: 221 MDQSSSASGSTVMPINNQG---DRSSSSHSPPSNQDRAGPSEFQSFSDSLKSRLNAMSMR 277
Query: 215 YKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
YKE IS+ TR KERL SRN+S+ ++ EV+RE++AGI V++M+ERL+
Sbjct: 278 YKE-ISRSTRGWKERLFSRNSSMSDIGSEVRREVNAGITSVSRMMERLE 325
>gi|414592036|tpg|DAA42607.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 397
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 156/304 (51%), Gaps = 33/304 (10%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHE+HLQCILEW QRS +CP+CWQ +K+P QELL A+E ER A
Sbjct: 58 VTSCKHEFHLQCILEWCQRSSQCPMCWQAISMKDPTSQELLEAVEEERNDVQENHARTTT 117
Query: 68 V---TFPEDFDNGPDGTYFDYDD--MEARIMQHLAAARYFR------RREMQRYPALDAS 116
V DF+ D DD +E RIMQHLAAA R RRE +R A+
Sbjct: 118 VFRHPLLGDFE-----VPVDADDAEIEERIMQHLAAAAAIRRSHRHARREGRRSSRAAAA 172
Query: 117 QVVDSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPP----SSDPGTNRD 172
T L P+ + GS S+ + PP +S GT+ D
Sbjct: 173 HGHGHPQPQTQVLFFPSAGEATPGGSGSPSPHPRQEHAASSVVSPPPLPAVASAEGTDAD 232
Query: 173 ---------GPFKSRVFFRQSPPDSPRRPNPS-EVFSFSESVKSKWSAASARYKESISKG 222
GP S V QS P + PS + SFS+++KS+ + S +YK+SI+K
Sbjct: 233 STASVGGAVGPDDS-VSRSQSSPVNHDEAGPSADAQSFSDTIKSRLQSVSTKYKDSITKS 291
Query: 223 TRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIER-LDLASKRSGTPAPSSANAGG 281
TR KER ++++++ L E++RE+ AGIA V++MIE+ L+ SGT APS A A
Sbjct: 292 TRGWKERWFAQSSAMSNLGSEMRREVGAGIAAVSRMIEKQLETRPDGSGT-APSPATASS 350
Query: 282 PSSA 285
P+ A
Sbjct: 351 PAHA 354
>gi|388514751|gb|AFK45437.1| unknown [Lotus japonicus]
Length = 370
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 149/280 (53%), Gaps = 24/280 (8%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
V C+HE+HLQCILEW QRS +CP+CWQ LK+P QEL +E ER + P +AA
Sbjct: 43 VPVCRHEFHLQCILEWCQRSSQCPMCWQNISLKDPTSQELFEGVEHERRLRETPSRNAAI 102
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAARYFR-----RREMQRY--PALDASQV 118
P DFD + D E R++QHLAAA R RRE QR A
Sbjct: 103 FHHPALGDFDLQHLSMGVNDGDFEERLIQHLAAAAAMRRHHLVRREGQRTRSSAQGHPHF 162
Query: 119 VDSSSAATASLMLPTNA----NSPNFC-HGSSDTDIP---------TSVIRSTDNAQPPS 164
+ S+ AS + P +A N P GS T I S IR+ ++
Sbjct: 163 LVFSTQPIASPLGPDSAAGGGNEPAVIPVGSPSTPIAFVGDEPSQQISHIRTQRSSSSSG 222
Query: 165 SDPGTNRDGPFKS-RVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGT 223
S TNR G + S R S P S R PSE+ SFS+S++S+ ++ S RYKESISKG
Sbjct: 223 SGMATNRQGIYSSDRGSAAPSSPASQDRAGPSELQSFSDSLRSQLNSVSMRYKESISKGA 282
Query: 224 RSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
R KERL SR++S+ E E + E++A IA V++++E L+
Sbjct: 283 RGWKERLFSRSSSMSEPGSEARSEVNAVIASVSQLMESLE 322
>gi|357111546|ref|XP_003557573.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Brachypodium
distachyon]
Length = 368
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 157/280 (56%), Gaps = 32/280 (11%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESER-LSKSRPIASAA 66
VT CKHE+HLQCILEW QRS +CP+CWQ +K+P QELL AIE ER + ++R A+A
Sbjct: 45 VTGCKHEFHLQCILEWCQRSSQCPMCWQAISMKDPLSQELLEAIEQERNVQENRSRATAV 104
Query: 67 ---PVTFPEDFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQ--------RYPALDA 115
P+ + P GT D ++E RIMQHLAAA RR + R A
Sbjct: 105 FRHPMLGHFEV---PVGT--DDAELEERIMQHLAAAAVARRSQRHGRREGHRSRSGAHGR 159
Query: 116 SQVVDSSSA-ATASLMLPTNA-------NSPNFCHGSSDTDIPTSVIRSTDNAQPPSS-- 165
+Q+V S+A T+S +P+++ +SP S+ P + + A +S
Sbjct: 160 TQIVVYSTAETTSSDPVPSDSQQEVGSEHSPAII--SAHRSAPVVAVNDMEEASADTSVH 217
Query: 166 --DPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGT 223
G + DG R+ S + PS++ SF +++K++ + S +YK+SI+K T
Sbjct: 218 ANTSGNHPDGS-NYRISGNGSSLANEDGAGPSDLQSFPDTLKTRLQSVSMKYKDSITKNT 276
Query: 224 RSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLD 263
R KER LSR+ ++ + +V+RE++AG+A V++M+ERL+
Sbjct: 277 RGWKERWLSRSDTISNIGSDVRREVNAGLAAVSRMMERLE 316
>gi|326500536|dbj|BAK06357.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511621|dbj|BAJ91955.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528311|dbj|BAJ93337.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 146/268 (54%), Gaps = 15/268 (5%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+CKH++HLQCILEW QRS +CP+CWQ +K+P QELL A+E E+ ++ P + A
Sbjct: 58 VTNCKHDFHLQCILEWCQRSSQCPMCWQAISMKDPLSQELLEAVEQEKKVQADPSRTTAV 117
Query: 68 VTFPEDFDNGPDGTYFDYDD--MEARIMQHLAAARYFR------RREMQR---YPALDAS 116
P G D DD +E R+MQHLAAA R RRE R P
Sbjct: 118 FRHPM---LGHFEVPVDTDDAELEERLMQHLAAAAVTRRSHRHGRREGNRGRSGPHGRTQ 174
Query: 117 QVVDSSSAATASLMLPTNANSPNFC-HGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPF 175
VV S++ T+S +P+++ H + P P ++ +N
Sbjct: 175 IVVFSTTETTSSESIPSDSRQVGDSEHSPAIISAPVDATEEASAGIPVHNNTSSNCPVGS 234
Query: 176 KSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNT 235
R+ ++ P + PS+ SFS ++K++ + S +YK+SI+K TR KER LSR+
Sbjct: 235 NDRISGDEASPINQDGAGPSDPQSFSNTLKTRLQSVSIKYKDSITKNTRGWKERWLSRSD 294
Query: 236 SVKELSKEVQREMSAGIAGVAKMIERLD 263
++ L +V+RE++AGIA V++M+ERL+
Sbjct: 295 TISSLGSDVRREVNAGIAAVSRMMERLE 322
>gi|242032745|ref|XP_002463767.1| hypothetical protein SORBIDRAFT_01g005760 [Sorghum bicolor]
gi|241917621|gb|EER90765.1| hypothetical protein SORBIDRAFT_01g005760 [Sorghum bicolor]
Length = 328
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 158/291 (54%), Gaps = 26/291 (8%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T+CKH+YHLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ + A
Sbjct: 45 MTNCKHDYHLQCILEWCQRSSQCPMCWQPISMKDPLSQELLEAVEQERNIRANRSHNTAV 104
Query: 68 VTFP--EDFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAA 125
P DF+ P G D ++E RI+QHLAAA RR D + +S+
Sbjct: 105 FHHPMLGDFEI-PVGA--DDAELEERIIQHLAAAAAVRRSHRHHN-RRDGHRSRSGASSH 160
Query: 126 TASLMLPTNANSPNFCHGSSDTDIPTSVI--------------RSTDNAQPPSSDPGTNR 171
L+L + ++ + G D + +V+ R +A PS T
Sbjct: 161 PQFLVLSADEHTTSGEEG--DYEQAPAVVSGRPLGALVEQERTRGLVDASSPSLRFSTPA 218
Query: 172 DGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLL 231
DG +R+ QS P PS++ S S++++S+ +AS RYK+SI+K +ER
Sbjct: 219 DGRSNNRISGIQSTPVDQDGAGPSDLQSISDTLRSRLQSASMRYKDSITKSASGWRERWF 278
Query: 232 SRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGT-PAPSSANAGG 281
SR+ S+ +L EV+RE++AGIA V++M+ER D R G+ P+P+ A+ G
Sbjct: 279 SRSNSLSDLGSEVRREVNAGIAAVSRMMERHD---ARDGSGPSPTFASGSG 326
>gi|363806780|ref|NP_001242536.1| uncharacterized protein LOC100800419 [Glycine max]
gi|255641723|gb|ACU21132.1| unknown [Glycine max]
Length = 383
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 149/279 (53%), Gaps = 23/279 (8%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+CKHE+HLQCILEW QRS +CP+CWQ LK+P QEL +E ER ++ P +AA
Sbjct: 51 VTTCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELFEVVEQERSLRATPSRNAAI 110
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAARY--------FRRREMQRYPALDASQ 117
P DF+ + D E RI+QHLAAA +R + R A Q
Sbjct: 111 FHHPAFGDFELQHLRMSLNDADFEERIIQHLAAAAAMRRANQLGWREGQRARSSAHGHPQ 170
Query: 118 VVDSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRS---------TDNAQPPSSDP- 167
+ S+ A + N P S + TSV T ++ S P
Sbjct: 171 FLVFSNQPIAPSSVAGGENDPTAIPNRSPSTPITSVGNEASQQILHLQTQSSSSASGSPV 230
Query: 168 -GTNRDGPFKS-RVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRS 225
TN G + + R S P + R PSE+ SFS+S++S+ +A S RYKESISKGTR
Sbjct: 231 MATNPRGIYSNERGSTACSSPANQDRAEPSELQSFSDSLRSRLNAVSMRYKESISKGTRG 290
Query: 226 LKERLLSRNTSVKELSKEV-QREMSAGIAGVAKMIERLD 263
KERL SR++S+ +L E +RE+++GIA V++++E L+
Sbjct: 291 WKERLFSRSSSMSKLGSETRRREINSGIASVSRLMESLE 329
>gi|27819501|gb|AAO24905.1| putative zinc finger protein [Oryza sativa Japonica Group]
Length = 336
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 151/286 (52%), Gaps = 31/286 (10%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHEYHLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ + +AA
Sbjct: 45 VTSCKHEYHLQCILEWCQRSSQCPMCWQPISMKDPMSQELLEAVEQERNIRANRLNTAAV 104
Query: 68 VTFP--EDFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAA 125
P DF+ P G D ++E RI+QHLAAA RR R+ D + S +
Sbjct: 105 FHHPVLGDFEV-PVGA--DDAELEERIIQHLAAAAAMRRS--HRHGRRDGHRSRSGSHSR 159
Query: 126 TASLMLPTNANSPNF-CHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQS 184
++ N P H SS D D+ Q SSD G+ PF +
Sbjct: 160 PQIVVFSRNEAIPGGSLHASSGQD--------EDHEQ--SSDLGSAH--PFAALAAV--- 204
Query: 185 PPDSPRRPNPSEVF-SFSESVKSKWSA----ASARYKESISKGTRSLKERLLSRNTSVKE 239
D S+++ S+ S S A +RYK+SI+K TR KER SR+ ++
Sbjct: 205 --DQGHMSGGSQLYVGHSDQGASNPSLHDERAMSRYKDSITKSTRGWKERWFSRSNTISG 262
Query: 240 LSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAGGPSSA 285
L EV+RE++AGIA V++M+ERL+ +G A +A+A PS A
Sbjct: 263 LGTEVRREVNAGIAAVSRMMERLETKDD-TGPSAVPAASACSPSDA 307
>gi|356537228|ref|XP_003537131.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
Length = 350
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 134/267 (50%), Gaps = 29/267 (10%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+CKHE+HLQCILEW QRS +CP+CWQ L++ QELL A+E ER + P +AA
Sbjct: 48 VTNCKHEFHLQCILEWCQRSSQCPMCWQPISLRDTTSQELLEAVELERSLRDTPSRNAAI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAA 125
P DF+ + D+E RI+QHL AA RR + + S+
Sbjct: 108 FHHPALGDFELQHLPMAMNEADIEERIIQHLTAAAAMRRS--HHLGQREGHRTRSSAHGR 165
Query: 126 TASLMLPTNANSPNFCHGSSD------TDIPTSVIRSTDNAQ-PPSSDP----------- 167
L+ T ++P F G IP++ + N Q P P
Sbjct: 166 PHFLVYSTQPSAPPFAAGGESEPAAIPVGIPSTPLTFDGNEQSSPQQIPYFQTRGSSLTS 225
Query: 168 -----GTNRDGPFKS-RVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISK 221
TN G + R F S P S R PSE SFS+S++S+++A S RYKESISK
Sbjct: 226 GSTVATTNLQGVHSNDRRFASHSFPASQDRAQPSEQ-SFSDSLRSRFNAVSTRYKESISK 284
Query: 222 GTRSLKERLLSRNTSVKELSKEVQREM 248
GTR KERL S N+S+ EL E+Q E
Sbjct: 285 GTRGWKERLFSPNSSMSELGSEIQNEF 311
>gi|222159969|gb|ACM47318.1| putative zinc ion binding protein [Capsicum annuum]
Length = 376
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 143/292 (48%), Gaps = 32/292 (10%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT CKHE+HLQCILEW QRS +CP+ WQ LK+P+ QELL A+E ER + P + A
Sbjct: 45 VTGCKHEFHLQCILEWCQRSSQCPMRWQPLSLKDPSSQELLDAVEHERNIRMNPPRNTAI 104
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQRY--------- 110
P DF+ ++E RI+QHLAA AR+ RRE R
Sbjct: 105 FHHPTLGDFELQHLPASATDSELEERIIQHLAAAAAMGRARHIARREGPRGRSSAQGRPH 164
Query: 111 -----------PALDASQVVDSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDN 159
P AS S +L + NS N + P + ++ +
Sbjct: 165 FLVFSTHPNAPPPAGASTSTQRSGGEATPGVLVSGPNSANVSGRPVVSSFPADPVPASGS 224
Query: 160 AQPPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESI 219
S+ N+ G + QS P++ R PS+ SFSES+KS+ SA S RYKES+
Sbjct: 225 G----SNAAVNQLGTSSNNRRTPQSSPNNQDRAGPSDFQSFSESIKSRLSAMSMRYKESL 280
Query: 220 SKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGT 271
+K +R KE+ SRN+S + E + E+SA +A V ++E L+ R+ +
Sbjct: 281 TKSSRGWKEKFFSRNSSTPDHCPESRNEVSAAVATVTTLMEHLETTDSRANS 332
>gi|449505456|ref|XP_004162475.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Cucumis sativus]
Length = 216
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 82/117 (70%), Gaps = 6/117 (5%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+TSCKHEYHLQCIL+WSQRS ECPIC Q VLK+P QELLAA+ SERL KSR ++SAA
Sbjct: 48 ITSCKHEYHLQCILDWSQRSDECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAAS 107
Query: 68 VT--FPEDFDNGPDGTYFDYDDMEARIMQHLAA----ARYFRRREMQRYPALDASQV 118
+ F E+FD D + D D + IMQHLAA ARY +RRE QR+ + SQV
Sbjct: 108 TSLHFHENFDFDHDSVHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGVGPSQV 164
>gi|388499468|gb|AFK37800.1| unknown [Medicago truncatula]
Length = 304
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 122/250 (48%), Gaps = 34/250 (13%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPV 68
T+C+HE+HLQC+LEW QRS +CP+CWQ LK+P QEL A+E ER + P +
Sbjct: 64 TACRHEFHLQCVLEWGQRSSQCPMCWQPISLKDPTGQELFEAVEQERKWRVTPSRNIDIF 123
Query: 69 TFPEDFDNGPDGTYFDYD--DMEARIMQHLAAA------RYFRRREMQ--------RYPA 112
P G + + +E R++Q+LA + RRE Q R
Sbjct: 124 HSPTLGGFGFQHLHMGVNGSSLEERLLQNLAIVAPIGRTHHVGRREGQQIRPSGHEREDN 183
Query: 113 LDASQVVDSSSAATASLMLPTNANSPNFCHGSSDTDIPT--SVIRSTDNAQPPSSDPGTN 170
L+A + S+ T+S P GS PT S + T++ + S+D
Sbjct: 184 LNAIHMSSQSTPITSSEDEPLQQILKRQTEGS-----PTSRSTVTETNDQETYSND---- 234
Query: 171 RDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERL 230
R S P + R SE SFS++++SK +A S RYKESIS GTR KERL
Sbjct: 235 -------RDCVANSSPINQNRERSSEFHSFSDTLRSKLNAVSMRYKESISNGTRGWKERL 287
Query: 231 LSRNTSVKEL 240
SR++++ E
Sbjct: 288 FSRSSTMSEF 297
>gi|413932861|gb|AFW67412.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 319
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 137/290 (47%), Gaps = 33/290 (11%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKH+YHLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ P + A
Sbjct: 45 MTKCKHDYHLQCILEWCQRSSQCPMCWQHISMKDPMSQELLEAVEQERNIRANPSRNTAV 104
Query: 68 V--TFPEDFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAA 125
DF+ P G D ++E RI+QHLAAA RR D Q +S+
Sbjct: 105 FHHQMLGDFEI-PVGA--DDAELEERIIQHLAAAAAVRRSHRHHNRR-DGHQSRSEASSH 160
Query: 126 TASLMLPTNANSPNFCHGSSD------------TDIPTSVIRSTDNAQPPSSDPGTNRD- 172
L+L + + + G + T + R +A PS T D
Sbjct: 161 PQFLVLSADERTISGQEGDYEQASAVASGRPLRTLVEQERTRGLADASSPSLRCSTPADS 220
Query: 173 -GPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLL 231
G +R+ +S P PS + S A + +S S +ER
Sbjct: 221 TGRSNNRISGIESTPVDQDGTGPSALQSM---------AVQGFHNQSAS----GWRERWF 267
Query: 232 SRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAGG 281
SR+ S+ +L EV+RE++AGIA V++M+E D P+P+SA+ G
Sbjct: 268 SRSNSLLDLGSEVRREVNAGIAAVSRMMEWHDARDGTGAGPSPTSASRSG 317
>gi|226496435|ref|NP_001146709.1| uncharacterized protein LOC100280311 [Zea mays]
gi|194697820|gb|ACF82994.1| unknown [Zea mays]
gi|194699420|gb|ACF83794.1| unknown [Zea mays]
gi|413932857|gb|AFW67408.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413932858|gb|AFW67409.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
gi|413932859|gb|AFW67410.1| putative RING zinc finger domain superfamily protein isoform 3 [Zea
mays]
Length = 318
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 138/290 (47%), Gaps = 34/290 (11%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKH+YHLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ P + A
Sbjct: 45 MTKCKHDYHLQCILEWCQRSSQCPMCWQHISMKDPMSQELLEAVEQERNIRANPSRNTAV 104
Query: 68 V--TFPEDFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAA 125
DF+ P G D ++E RI+QHLAAA RR D Q +S+
Sbjct: 105 FHHQMLGDFEI-PVGA--DDAELEERIIQHLAAAAAVRRSHRHHNRR-DGHQSRSEASSH 160
Query: 126 TASLMLPTNANSPNFCHGSSD------------TDIPTSVIRSTDNAQPPSSDPGTNRD- 172
L+L + + + G + T + R +A PS T D
Sbjct: 161 PQFLVLSADERTISGQEGDYEQASAVASGRPLRTLVEQERTRGLADASSPSLRCSTPADS 220
Query: 173 -GPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLL 231
G +R+ +S P PS + S + ++ SA+ R ER
Sbjct: 221 TGRSNNRISGIESTPVDQDGTGPSALQSMVQGFHNQ-SASGWR-------------ERWF 266
Query: 232 SRNTSVKELSKEVQREMSAGIAGVAKMIERLDLASKRSGTPAPSSANAGG 281
SR+ S+ +L EV+RE++AGIA V++M+E D P+P+SA+ G
Sbjct: 267 SRSNSLLDLGSEVRREVNAGIAAVSRMMEWHDARDGTGAGPSPTSASRSG 316
>gi|7485164|pir||G71403 hypothetical protein - Arabidopsis thaliana
Length = 354
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 77/101 (76%), Gaps = 4/101 (3%)
Query: 196 EVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGV 255
E S E++KSK +AASA+YKESISK + LKE+LL+RN SVKELSK VQREM+AGIAGV
Sbjct: 175 EASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSKGVQREMNAGIAGV 234
Query: 256 AKMIERLDLASKRSGTPA---PSSANAGGPSSALFKGKGVQ 293
A+MIER+D +SKR G A S+A A G + + FKGK V+
Sbjct: 235 ARMIERMDFSSKRFGGSAHVSTSTATASGFNFS-FKGKRVE 274
>gi|16226716|gb|AAL16240.1|AF428471_1 AT4g14220/dl3150w [Arabidopsis thaliana]
Length = 161
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 77/101 (76%), Gaps = 4/101 (3%)
Query: 196 EVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGV 255
E S E++KSK +AASA+YKESISK + LKE+LL+RN SVKELSK VQREM+AGIAGV
Sbjct: 39 EASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSKGVQREMNAGIAGV 98
Query: 256 AKMIERLDLASKRSGTPA---PSSANAGGPSSALFKGKGVQ 293
A+MIER+D +SKR G A S+A A G + + FKGK V+
Sbjct: 99 ARMIERMDFSSKRFGGSAHVSTSTATASGFNFS-FKGKRVE 138
>gi|414592037|tpg|DAA42608.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 333
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 108/231 (46%), Gaps = 27/231 (11%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHE+HLQCILEW QRS +CP+CWQ +K+P QELL A+E ER A
Sbjct: 58 VTSCKHEFHLQCILEWCQRSSQCPMCWQAISMKDPTSQELLEAVEEERNDVQENHARTTT 117
Query: 68 V---TFPEDFDNGPDGTYFDYDDMEARIMQHLAAARYFR------RREMQRYPALDASQV 118
V DF+ D D ++E RIMQHLAAA R RRE +R A+
Sbjct: 118 VFRHPLLGDFEVPVDA---DDAEIEERIMQHLAAAAAIRRSHRHARREGRRSSRAAAAHG 174
Query: 119 VDSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPP----SSDPGTNRD-- 172
T L P+ + GS S+ + PP +S GT+ D
Sbjct: 175 HGHPQPQTQVLFFPSAGEATPGGSGSPSPHPRQEHAASSVVSPPPLPAVASAEGTDADST 234
Query: 173 -------GPFKSRVFFRQSPPDSPRRPNPS-EVFSFSESVKSKWSAASARY 215
GP S V QS P + PS + SFS+++KS+ + S +Y
Sbjct: 235 ASVGGAVGPDDS-VSRSQSSPVNHDEAGPSADAQSFSDTIKSRLQSVSTKY 284
>gi|449442598|ref|XP_004139068.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Cucumis sativus]
Length = 389
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 67/112 (59%), Gaps = 12/112 (10%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+TSCKHE+HLQC+LEW QRS +CP+CWQ LK+P QELL A+E ER + P ++
Sbjct: 50 MTSCKHEFHLQCVLEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERSFRLNPARNSTI 109
Query: 68 VTFPE--DFD--NGPDGTYFDYDDMEARIMQHL------AAARYFRRREMQR 109
P DF+ + P G + D+E RI+QHL AR+ RRE R
Sbjct: 110 FRHPTLGDFELQHLPAGA--NDADLEERILQHLAAAAAMGQARHSARRESHR 159
>gi|108864535|gb|ABA94394.2| RING-H2 finger protein RHF2a, putative, expressed [Oryza sativa
Japonica Group]
Length = 332
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 127/260 (48%), Gaps = 52/260 (20%)
Query: 46 ELLAAIESERLSKSRPIASAAPVTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAA---- 99
+LL A+E ER ++ + P DF+ + ++E RI+QHLAAA
Sbjct: 24 KLLEAVERERNVRTNQTRNTTIFHHPALGDFEVQHLPVVGNDAELEERILQHLAAAAAMG 83
Query: 100 --RYFRRREMQR----------------YPALDASQV---------VDSSSA---ATASL 129
+ RRE R +P + ++ VD+ S+ T L
Sbjct: 84 RSHHLGRREGHRGRSGSHGRPQFLVFSSHPNMPSAGSVSSSSVQGEVDNESSPVHTTGEL 143
Query: 130 MLPTNAN------SPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKSRVFFRQ 183
L N + SP +D D + S+ N+ P SS NR R Q
Sbjct: 144 SLHANTHEEAGNQSPGMLTYDADQD----AVVSSGNSTPVSSPRFFNR------RHSTGQ 193
Query: 184 SPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKELSKE 243
S P + R PS++ SFS+S+KS+ +A S +YKESI+K TR KERL SR++SV +L E
Sbjct: 194 STPVNNDRAGPSDLQSFSDSLKSRLNAVSMKYKESITKSTRGWKERLFSRHSSVADLGSE 253
Query: 244 VQREMSAGIAGVAKMIERLD 263
V+RE++AGIA V++M+ERL+
Sbjct: 254 VRREVNAGIASVSRMMERLE 273
>gi|168003193|ref|XP_001754297.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694399|gb|EDQ80747.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT+C+HEYHLQCILEWSQRSKECP+CWQ LK+ QELL A+E ER + +A
Sbjct: 39 VTNCRHEYHLQCILEWSQRSKECPMCWQPLTLKDSKSQELLIAVEQERALRRHKTQAAQM 98
Query: 68 VTFPEDFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREM 107
P + G D + Y D E IMQHLAA R M
Sbjct: 99 YHRPSVEEYGFD-RFASYGD-ENCIMQHLAAMAMGRAHPM 136
>gi|77551598|gb|ABA94395.1| RING-H2 finger protein RHF2a, putative, expressed [Oryza sativa
Japonica Group]
Length = 249
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER ++ +
Sbjct: 48 LTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNVRTNQTRNTTI 107
Query: 68 VTFPE--DFDNGPDGTYFDYDDMEARIMQHLAAA------RYFRRREMQR 109
P DF+ + ++E RI+QHLAAA + RRE R
Sbjct: 108 FHHPALGDFEVQHLPVVGNDAELEERILQHLAAAAAMGRSHHLGRREGHR 157
>gi|121489747|emb|CAK18845.1| RING-H2 zinc finger protein precursor [Phillyrea latifolia]
Length = 175
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 8/110 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+TSCKHE+HLQCILEW QRS +CP+CWQ LK+P+ QELL A+E ER + P + A
Sbjct: 21 MTSCKHEFHLQCILEWCQRSSQCPMCWQSVSLKDPSSQELLDAVEHERNIRMNPPRNTAI 80
Query: 68 VTFP--EDFDNGPDGTYFDYDDMEARIMQHLAA------ARYFRRREMQR 109
P DF+ ++E RI+QHLAA AR RRE +R
Sbjct: 81 FHHPALRDFELQLLAVSAGDSELEERIIQHLAAAAAMGRARQLARREGER 130
>gi|224035239|gb|ACN36695.1| unknown [Zea mays]
gi|413932860|gb|AFW67411.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 305
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T CKH+YHLQCILEW QRS +CP+CWQ +K+P QELL A+E ER ++ P + A
Sbjct: 45 MTKCKHDYHLQCILEWCQRSSQCPMCWQHISMKDPMSQELLEAVEQERNIRANPSRNTAV 104
Query: 68 V--TFPEDFDNGPDGTYFDYDDMEARIMQHLAAA 99
DF+ P G D ++E RI+QHLAAA
Sbjct: 105 FHHQMLGDFEI-PVGA--DDAELEERIIQHLAAA 135
>gi|302769666|ref|XP_002968252.1| hypothetical protein SELMODRAFT_89697 [Selaginella
moellendorffii]
gi|302788712|ref|XP_002976125.1| hypothetical protein SELMODRAFT_104539 [Selaginella
moellendorffii]
gi|300156401|gb|EFJ23030.1| hypothetical protein SELMODRAFT_104539 [Selaginella
moellendorffii]
gi|300163896|gb|EFJ30506.1| hypothetical protein SELMODRAFT_89697 [Selaginella
moellendorffii]
Length = 104
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 41/48 (85%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESER 55
+T CKHEYHLQCI+EWSQRSKECP+CWQ LK+P QELLAA+E ER
Sbjct: 36 ITCCKHEYHLQCIIEWSQRSKECPMCWQALSLKDPNSQELLAAVEHER 83
>gi|357453315|ref|XP_003596934.1| RING finger protein [Medicago truncatula]
gi|355485982|gb|AES67185.1| RING finger protein [Medicago truncatula]
Length = 209
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VTSCKHE+HLQCILEW QRS +CP+CWQ LK+P QELL A+E ER + P +A
Sbjct: 52 VTSCKHEFHLQCILEWCQRSSQCPMCWQSISLKDPTGQELLEAVERERNIRFNPTRNATI 111
Query: 68 VTFPE--DFD 75
P DF+
Sbjct: 112 FHHPTLGDFE 121
>gi|168041403|ref|XP_001773181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675540|gb|EDQ62034.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 117
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 43/57 (75%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASA 65
TSC H+YHLQCI+EWSQRSKECP+CWQ LK+P Q+LL AI ER + R + +A
Sbjct: 36 TSCSHDYHLQCIIEWSQRSKECPMCWQPLSLKDPESQDLLNAIGQERALRRRKLQAA 92
>gi|57471052|gb|AAW50844.1| C3HC4-type RING zinc finger protein [Aegiceras corniculatum]
Length = 139
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRP 61
VT CKHE+HLQCILEW QRS +CP+CWQ LK+P+ QEL+ AI+ E+ + RP
Sbjct: 65 VTGCKHEFHLQCILEWCQRSSQCPMCWQSINLKDPSSQELVDAIQREKSVRVRP 118
>gi|168041094|ref|XP_001773027.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675574|gb|EDQ62067.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 96
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 38/48 (79%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESER 55
VTSCKH+YHLQCILEWSQRS ECP+C Q LK+P QELL A+ ER
Sbjct: 36 VTSCKHDYHLQCILEWSQRSTECPMCLQPLSLKDPDSQELLKAVGQER 83
>gi|32400766|gb|AAP80615.1|AF470354_1 RING-H2 finger protein [Triticum aestivum]
Length = 125
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESER 55
+T CKHE+HLQCILEW QRS +CP+CWQ +K+P QELL A+ ER
Sbjct: 59 LTGCKHEFHLQCILEWCQRSSQCPMCWQPVSMKDPTSQELLEAVXRER 106
>gi|212275608|ref|NP_001130822.1| uncharacterized protein LOC100191926 [Zea mays]
gi|194690206|gb|ACF79187.1| unknown [Zea mays]
Length = 255
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 93 MQHLAAARYFRR------REMQRYPALDASQVVDSSSAATASLMLPTNANSPNFCHGSSD 146
MQHLAAA RR RE +R A+ T L P+ + GS
Sbjct: 1 MQHLAAAAAIRRSHRHARREGRRSSRAAAAHGHGHPQPQTQVLFFPSAGEATPGGSGSPS 60
Query: 147 TDIPTSVIRSTDNAQPP----SSDPGTNRD---------GPFKSRVFFRQSPPDSPRRPN 193
S+ + PP +S GT+ D GP S V QS P +
Sbjct: 61 PHPRQEHAASSVVSPPPLPAVASAEGTDADSTASVGGAVGPDDS-VSRSQSSPVNHDEAG 119
Query: 194 PS-EVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGI 252
PS + SFS+++KS+ + S +YK+SI+K TR KER ++++++ L E++RE+ AGI
Sbjct: 120 PSADAQSFSDTIKSRLQSVSTKYKDSITKSTRGWKERWFAQSSAMSNLGSEMRREVGAGI 179
Query: 253 AGVAKMIER-LDLASKRSGTPAPSSANAGGPSSA 285
A V++MIE+ L+ SGT APS A A P+ A
Sbjct: 180 AAVSRMIEKQLETRPDGSGT-APSPATASSPAHA 212
>gi|356509724|ref|XP_003523596.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RHF2A-like [Glycine max]
Length = 239
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 94/243 (38%), Gaps = 64/243 (26%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSR------- 60
VT+CKHE+HLQCILEW W F ++ + +E +S
Sbjct: 51 VTNCKHEFHLQCILEWVIYFWFNWFLWAMFTVENVVISIYINILEVSDHGRSHFLVYSTQ 110
Query: 61 ---PIASAAPVTFPEDFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQ 117
P ++A + P G T D E +Q + Y + +S
Sbjct: 111 PSAPPSAAGGGSEPAAIALGSPSTPLTLDGNEQSSLQQIP------------YVQIRSSF 158
Query: 118 VVDSSSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSSDPGTNRDGPFKS 177
+ +S+ AT +L I S D
Sbjct: 159 LTSASTVATTNLQ----------------------GIHSND------------------- 177
Query: 178 RVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSV 237
R F S P S R +PSE S S+S++S ++A S RYKESISKGTR KERL S NT
Sbjct: 178 RSFASHSFPASQDRAHPSEQ-SLSDSLRSTFNAVSMRYKESISKGTRGWKERLFSPNTVT 236
Query: 238 KEL 240
++
Sbjct: 237 GQI 239
>gi|219888443|gb|ACL54596.1| unknown [Zea mays]
gi|224031497|gb|ACN34824.1| unknown [Zea mays]
gi|413932862|gb|AFW67413.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413932863|gb|AFW67414.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 250
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 116/266 (43%), Gaps = 34/266 (12%)
Query: 32 ICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPV--TFPEDFDNGPDGTYFDYDDME 89
+CWQ +K+P QELL A+E ER ++ P + A DF+ P G D ++E
Sbjct: 1 MCWQHISMKDPMSQELLEAVEQERNIRANPSRNTAVFHHQMLGDFEI-PVGA--DDAELE 57
Query: 90 ARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAATASLMLPTNANSPNFCHGSSD--- 146
RI+QHLAAA RR D Q +S+ L+L + + + G +
Sbjct: 58 ERIIQHLAAAAAVRRSHRHHN-RRDGHQSRSEASSHPQFLVLSADERTISGQEGDYEQAS 116
Query: 147 ---------TDIPTSVIRSTDNAQPPSSDPGTNRD--GPFKSRVFFRQSPPDSPRRPNPS 195
T + R +A PS T D G +R+ +S P PS
Sbjct: 117 AVASGRPLRTLVEQERTRGLADASSPSLRCSTPADSTGRSNNRISGIESTPVDQDGTGPS 176
Query: 196 EVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGV 255
+ S + + +S S +ER SR+ S+ +L EV+RE++AGIA V
Sbjct: 177 ALQSMVQGF----------HNQSAS----GWRERWFSRSNSLLDLGSEVRREVNAGIAAV 222
Query: 256 AKMIERLDLASKRSGTPAPSSANAGG 281
++M+E D P+P+SA+ G
Sbjct: 223 SRMMEWHDARDGTGAGPSPTSASRSG 248
>gi|297728507|ref|NP_001176617.1| Os11g0572500 [Oryza sativa Japonica Group]
gi|255680202|dbj|BAH95345.1| Os11g0572500 [Oryza sativa Japonica Group]
Length = 96
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
+T CKHE+HLQCILEW QRS +CP+CWQ LK+P
Sbjct: 48 LTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDP 82
>gi|238011946|gb|ACR37008.1| unknown [Zea mays]
Length = 118
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 213 ARYKESISKGTRSLKERLLSRNTSVKELSKEVQREMSAGIAGVAKMIER-LDLASKRSGT 271
RYK+SI+K TR KER ++++++ L E++RE+ AGIA V++MIE+ L+ SGT
Sbjct: 3 GRYKDSITKSTRGWKERWFAQSSAMSNLGSEMRREVGAGIAAVSRMIEKQLETRPDGSGT 62
Query: 272 PAPSSANAGGPSSA 285
APS A A P+ A
Sbjct: 63 -APSPATASSPAHA 75
>gi|147812108|emb|CAN61521.1| hypothetical protein VITISV_010800 [Vitis vinifera]
Length = 177
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CILEW +RS+ CP+C Q+ +L++
Sbjct: 140 ITKCNHHFHLSCILEWMERSETCPVCDQEMILED 173
>gi|225454365|ref|XP_002278589.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Vitis vinifera]
gi|297745359|emb|CBI40439.3| unnamed protein product [Vitis vinifera]
Length = 184
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CILEW +RS+ CP+C Q+ +L++
Sbjct: 147 ITKCNHHFHLSCILEWMERSETCPVCDQEMILED 180
>gi|255648202|gb|ACU24554.1| unknown [Glycine max]
Length = 212
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
T+C H +HL CILEW +RS+ CP+C Q V P
Sbjct: 177 TNCDHHFHLACILEWMERSETCPVCDQDLVFDPP 210
>gi|356513367|ref|XP_003525385.1| PREDICTED: uncharacterized protein LOC100790079 [Glycine max]
Length = 213
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
T+C H +HL CILEW +RS+ CP+C Q V P
Sbjct: 178 TNCDHHFHLACILEWMERSETCPVCDQDLVFDPP 211
>gi|359806791|ref|NP_001241561.1| uncharacterized protein LOC100816369 [Glycine max]
gi|255641755|gb|ACU21148.1| unknown [Glycine max]
Length = 213
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
T C H +HL CILEW +RS+ CP+C Q V P
Sbjct: 178 TKCDHHFHLACILEWMERSETCPVCDQDLVFDPP 211
>gi|224074986|ref|XP_002304508.1| predicted protein [Populus trichocarpa]
gi|222841940|gb|EEE79487.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
T C+H YHL CILEW +RS+ CP+C ++ + P
Sbjct: 219 TTKCEHHYHLSCILEWMERSESCPVCDKEMIFDPP 253
>gi|224053875|ref|XP_002298023.1| predicted protein [Populus trichocarpa]
gi|222845281|gb|EEE82828.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
+T C+H +HL CILEW +RS+ CP+C ++ ++ P
Sbjct: 176 ITKCEHHFHLSCILEWMERSESCPVCDKEVIIDPP 210
>gi|356568411|ref|XP_003552404.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
Length = 184
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
+T C+H +HL CILEW +RS CPIC Q+ +
Sbjct: 153 LTKCEHHFHLSCILEWMERSDSCPICDQEMIF 184
>gi|356520392|ref|XP_003528846.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
Length = 191
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C+H +HL CILEW +RS CPIC Q+ + +
Sbjct: 155 LTKCEHHFHLSCILEWMERSDSCPICDQEMIFDQ 188
>gi|356531973|ref|XP_003534550.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
Length = 184
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
+T C+H +HL CILEW +RS CPIC Q+ +
Sbjct: 152 NLTKCEHHFHLSCILEWMERSDSCPICDQEMIF 184
>gi|224147373|ref|XP_002336465.1| predicted protein [Populus trichocarpa]
gi|222835076|gb|EEE73525.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H YHL CI EW +RS+ CP+C + + E
Sbjct: 166 VTQCNHHYHLSCIYEWMERSQTCPVCSKVMIFDE 199
>gi|255541972|ref|XP_002512050.1| protein binding protein, putative [Ricinus communis]
gi|223549230|gb|EEF50719.1| protein binding protein, putative [Ricinus communis]
Length = 223
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
VT CKH YHL CI EW +RS+ CP+C
Sbjct: 181 VTECKHHYHLGCIYEWQERSEHCPVC 206
>gi|449432140|ref|XP_004133858.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
sativus]
gi|449531297|ref|XP_004172623.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
sativus]
Length = 189
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLK 40
+T CKH +HL C+LEW++RS CPIC ++ + +
Sbjct: 155 ITKCKHHFHLACLLEWTERSDVCPICDKEMIFE 187
>gi|449452294|ref|XP_004143894.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
sativus]
Length = 211
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
T C+H +HL CILEW +RS CP+C Q+ V P
Sbjct: 176 TKCEHHFHLACILEWMERSDICPVCDQEMVFSSP 209
>gi|255541644|ref|XP_002511886.1| protein binding protein, putative [Ricinus communis]
gi|223549066|gb|EEF50555.1| protein binding protein, putative [Ricinus communis]
Length = 199
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
T C+H +HL CILEW +RS CPIC Q+ V
Sbjct: 164 TKCEHHFHLSCILEWMERSDTCPICDQEMVF 194
>gi|356560785|ref|XP_003548668.1| PREDICTED: uncharacterized protein LOC100804435 [Glycine max]
Length = 227
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C+H +HL CILEW +RS CPIC Q+ + +
Sbjct: 191 LTKCEHHFHLSCILEWMERSDSCPICNQEMIFDQ 224
>gi|297801436|ref|XP_002868602.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297314438|gb|EFH44861.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 212
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
V C H +HL CILEW +RS+ CP+C ++ V P
Sbjct: 176 VAKCDHHFHLACILEWMERSETCPVCNKEMVFDSP 210
>gi|255537531|ref|XP_002509832.1| protein binding protein, putative [Ricinus communis]
gi|223549731|gb|EEF51219.1| protein binding protein, putative [Ricinus communis]
Length = 212
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
T C+H +HL CILEW +RS CP+C ++ ++ P
Sbjct: 176 TTKCEHHFHLSCILEWMERSDTCPVCDKEMIIDPP 210
>gi|225426204|ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Vitis
vinifera]
Length = 213
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLK 40
VT C+H +HL CILEW +RS CP+C ++ +
Sbjct: 176 VTKCEHHFHLACILEWMERSDTCPVCDKEMIFN 208
>gi|413942075|gb|AFW74724.1| hypothetical protein ZEAMMB73_989714, partial [Zea mays]
Length = 167
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 32 ICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPVTFPE--DFDNGPDGTYFDYDDME 89
+CWQ +K+P QELL A+E ER ++ P + P DF+ P G D ++E
Sbjct: 1 MCWQHISMKDPMSQELLEAVEQERNIRANPSRNTVVFHHPMLGDFEI-PVGA--DDAELE 57
Query: 90 ARIMQHLAAA 99
RI+QHLAAA
Sbjct: 58 ERIIQHLAAA 67
>gi|297742211|emb|CBI34360.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLK 40
VT C+H +HL CILEW +RS CP+C ++ +
Sbjct: 190 VTKCEHHFHLACILEWMERSDTCPVCDKEMIFN 222
>gi|302759428|ref|XP_002963137.1| hypothetical protein SELMODRAFT_69982 [Selaginella
moellendorffii]
gi|302796844|ref|XP_002980183.1| hypothetical protein SELMODRAFT_59984 [Selaginella
moellendorffii]
gi|300151799|gb|EFJ18443.1| hypothetical protein SELMODRAFT_59984 [Selaginella
moellendorffii]
gi|300169998|gb|EFJ36600.1| hypothetical protein SELMODRAFT_69982 [Selaginella
moellendorffii]
Length = 60
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 17/25 (68%), Positives = 19/25 (76%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
T C H YHL CILEW +RSK CP+C
Sbjct: 33 TECGHHYHLACILEWMERSKHCPVC 57
>gi|388513663|gb|AFK44893.1| unknown [Medicago truncatula]
Length = 208
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
T C H++HL CILEW +RS+ CP+C Q V P
Sbjct: 172 TTQCGHDFHLACILEWMERSETCPVCDQVTVFSTP 206
>gi|18411296|ref|NP_567171.1| RING-H2 finger B1A [Arabidopsis thaliana]
gi|42572783|ref|NP_974488.1| RING-H2 finger B1A [Arabidopsis thaliana]
gi|88193784|gb|ABD42981.1| At4g00335 [Arabidopsis thaliana]
gi|110736762|dbj|BAF00342.1| RING-H2 finger protein RHB1a [Arabidopsis thaliana]
gi|332656459|gb|AEE81859.1| RING-H2 finger B1A [Arabidopsis thaliana]
gi|332656460|gb|AEE81860.1| RING-H2 finger B1A [Arabidopsis thaliana]
Length = 190
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
T C+HE+HL C+LEW +RS CPIC ++ V +
Sbjct: 155 TKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187
>gi|3790581|gb|AAC69853.1| RING-H2 finger protein RHB1a [Arabidopsis thaliana]
gi|21593116|gb|AAM65065.1| RING-H2 finger protein RHB1a [Arabidopsis thaliana]
Length = 190
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
T C+HE+HL C+LEW +RS CPIC ++ V +
Sbjct: 155 TKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187
>gi|171854683|dbj|BAG16531.1| putative zinc finger family protein [Capsicum chinense]
Length = 191
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLK 40
V C H +HL CILEW +RS+ CPIC Q+ + +
Sbjct: 157 VAKCNHHFHLSCILEWMERSQTCPICDQEMIYE 189
>gi|145497919|ref|XP_001434948.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402076|emb|CAK67551.1| unnamed protein product [Paramecium tetraurelia]
Length = 456
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAI-----ESERLSKSR 60
F++T C H +H QC+ +W++++ +CPIC Q LKE Q+ A I ES+ +
Sbjct: 350 FRITPCNHIFHDQCLQDWTKKNSQCPICRQG--LKEEEIQQFFAKIHSNNNESQSEINKK 407
Query: 61 PIASAAPVT 69
P P+T
Sbjct: 408 PSVQFIPLT 416
>gi|242067022|ref|XP_002454800.1| hypothetical protein SORBIDRAFT_04g037610 [Sorghum bicolor]
gi|241934631|gb|EES07776.1| hypothetical protein SORBIDRAFT_04g037610 [Sorghum bicolor]
Length = 171
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C+H +HL CILEW +RS+ CP+C Q ++ E
Sbjct: 135 VTRCEHHFHLCCILEWMERSETCPVCDQVTLIDE 168
>gi|212721008|ref|NP_001132414.1| uncharacterized LOC100193862 [Zea mays]
gi|194694318|gb|ACF81243.1| unknown [Zea mays]
gi|413934351|gb|AFW68902.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 176
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C+H +HL CILEW +R CP+C Q ++ E
Sbjct: 140 VTKCEHHFHLCCILEWMERKDTCPVCDQTILVDE 173
>gi|357137665|ref|XP_003570420.1| PREDICTED: RING-H2 finger protein ATL67-like [Brachypodium
distachyon]
Length = 172
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C+H +HL CILEW +RS+ CP+C Q ++ E
Sbjct: 136 ITKCEHHFHLCCILEWMERSETCPVCDQVTLIDE 169
>gi|224130328|ref|XP_002320810.1| predicted protein [Populus trichocarpa]
gi|222861583|gb|EEE99125.1| predicted protein [Populus trichocarpa]
Length = 186
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
+T+C+H +HL CILEW +RS CPIC Q L
Sbjct: 154 HITNCEHHFHLSCILEWMERSDTCPICDQVCFL 186
>gi|357502503|ref|XP_003621540.1| RING finger protein [Medicago truncatula]
gi|217073256|gb|ACJ84987.1| unknown [Medicago truncatula]
gi|355496555|gb|AES77758.1| RING finger protein [Medicago truncatula]
Length = 227
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H YHL CI EW +RS CP+C + + E
Sbjct: 192 VTKCNHHYHLGCIYEWMERSDSCPVCGKVMLFDE 225
>gi|224067912|ref|XP_002302595.1| predicted protein [Populus trichocarpa]
gi|222844321|gb|EEE81868.1| predicted protein [Populus trichocarpa]
Length = 185
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
+T C+H +HL CILEW +RS CPIC Q +L
Sbjct: 153 HITKCEHHFHLSCILEWMERSDICPICDQVCLL 185
>gi|356526552|ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
Length = 227
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H +HL CI EW +RS CP+C + V E
Sbjct: 191 VTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDE 224
>gi|195621658|gb|ACG32659.1| RHB1A [Zea mays]
Length = 174
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
VT C+H +HL CILEW +RS+ CP+C Q ++
Sbjct: 138 VTKCEHHFHLCCILEWMERSETCPVCDQITLI 169
>gi|212723778|ref|NP_001132873.1| uncharacterized LOC100194366 [Zea mays]
gi|194695630|gb|ACF81899.1| unknown [Zea mays]
gi|413939540|gb|AFW74091.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413939541|gb|AFW74092.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 174
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
VT C+H +HL CILEW +RS+ CP+C Q ++
Sbjct: 138 VTKCEHHFHLCCILEWMERSETCPVCDQITLI 169
>gi|301133556|gb|ADK63400.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 205
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
V C+H +HL CILEW +RS+ CP+C ++ + P
Sbjct: 169 VAKCEHHFHLACILEWMERSETCPVCNKEMMFDSP 203
>gi|18416148|ref|NP_567682.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|15982927|gb|AAL09810.1| AT4g23450/F16G20_150 [Arabidopsis thaliana]
gi|20334768|gb|AAM16245.1| AT4g23450/F16G20_150 [Arabidopsis thaliana]
gi|66865950|gb|AAY57609.1| RING finger family protein [Arabidopsis thaliana]
gi|332659358|gb|AEE84758.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 153
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H++HL CIL W +RS+ CP+C ++ VL E
Sbjct: 119 LTKCGHDFHLACILAWMERSEACPVCDKELVLTE 152
>gi|334186852|ref|NP_001190812.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186854|ref|NP_001190813.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659359|gb|AEE84759.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659360|gb|AEE84760.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 208
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H++HL CIL W +RS+ CP+C ++ VL E
Sbjct: 174 LTKCGHDFHLACILAWMERSEACPVCDKELVLTE 207
>gi|18422087|ref|NP_568590.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|15081801|gb|AAK82555.1| AT5g41350/MYC6_6 [Arabidopsis thaliana]
gi|23505815|gb|AAN28767.1| At5g41350/MYC6_6 [Arabidopsis thaliana]
gi|332007285|gb|AED94668.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 212
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
V C H +HL CILEW +RS+ CP+C ++ V
Sbjct: 176 VAKCDHHFHLACILEWMERSETCPVCNKEMVF 207
>gi|339013488|gb|AEJ33929.1| putative zinc finger family protein [Wolffia australiana]
Length = 184
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
+ C+H +HL CI EW +RS CPIC Q V+
Sbjct: 150 IAKCQHHFHLSCIFEWMERSNTCPICDQLMVI 181
>gi|326528835|dbj|BAJ97439.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 171
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CILEW +RS+ CP+C Q ++ E
Sbjct: 135 ITKCDHHFHLCCILEWMERSETCPVCDQITLIDE 168
>gi|357504425|ref|XP_003622501.1| RING finger protein [Medicago truncatula]
gi|357514547|ref|XP_003627562.1| RING finger protein [Medicago truncatula]
gi|355497516|gb|AES78719.1| RING finger protein [Medicago truncatula]
gi|355521584|gb|AET02038.1| RING finger protein [Medicago truncatula]
gi|388504160|gb|AFK40146.1| unknown [Medicago truncatula]
Length = 191
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
++ C+H +HL CILEW +RS CPIC Q+ +
Sbjct: 155 LSKCEHHFHLACILEWMERSDSCPICDQEMIF 186
>gi|148909610|gb|ABR17896.1| unknown [Picea sitchensis]
Length = 233
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
T C H +HL CI EW +RSK CP+C ++ V E
Sbjct: 199 TQCGHHFHLGCIYEWMERSKNCPVCDKEMVFTE 231
>gi|414878909|tpg|DAA56040.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 230
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
+T C H +HL CI EW +RS CPIC VL+EP
Sbjct: 190 ITKCCHHFHLGCIYEWMERSDTCPICGNG-VLREP 223
>gi|413932864|gb|AFW67415.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 182
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 32 ICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPV--TFPEDFDNGPDGTYFDYDDME 89
+CWQ +K+P QELL A+E ER ++ P + A DF+ P G D ++E
Sbjct: 1 MCWQHISMKDPMSQELLEAVEQERNIRANPSRNTAVFHHQMLGDFEI-PVGA--DDAELE 57
Query: 90 ARIMQHLAAA 99
RI+QHLAAA
Sbjct: 58 ERIIQHLAAA 67
>gi|449016141|dbj|BAM79543.1| unknown Zinc finger protein [Cyanidioschyzon merolae strain 10D]
Length = 364
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
V C H +HL CI EW +RS C IC + E LA+ ESER+S+ S +
Sbjct: 165 VAFCGHAFHLGCIYEWMERSPYCAICARAMQFSE------LASTESERVSRETRSESDSS 218
Query: 68 VTFPEDFDN 76
T D D+
Sbjct: 219 WTVQSDSDH 227
>gi|39104581|dbj|BAC42779.2| putative RING-H2 finger protein RHB1a [Arabidopsis thaliana]
Length = 190
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C+HE+HL C+LEW +RS CPIC ++ V +
Sbjct: 157 CEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187
>gi|297807601|ref|XP_002871684.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317521|gb|EFH47943.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 233
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT+C H +HL CI EW +RS+ CP+C + E
Sbjct: 198 VTNCSHHFHLSCIYEWMERSENCPVCGKVMEFNE 231
>gi|326487784|dbj|BAK05564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 189
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H +HL CI EW +RS CPIC ++ E
Sbjct: 154 VTKCSHHFHLSCIYEWMERSDTCPICGKEMEFCE 187
>gi|384246001|gb|EIE19493.1| hypothetical protein COCSUDRAFT_25926 [Coccomyxa subellipsoidea
C-169]
Length = 187
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
TSC+H +HL CI EW +RS+ CPIC + +E
Sbjct: 153 TSCQHHFHLACIYEWLERSETCPICATKLSFEE 185
>gi|334188071|ref|NP_001190436.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332006988|gb|AED94371.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 326
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS+ CP+C + E
Sbjct: 289 ITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 322
>gi|242039929|ref|XP_002467359.1| hypothetical protein SORBIDRAFT_01g026330 [Sorghum bicolor]
gi|241921213|gb|EER94357.1| hypothetical protein SORBIDRAFT_01g026330 [Sorghum bicolor]
Length = 176
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C+H +HL CILEW +R CP+C Q ++ E
Sbjct: 140 VTKCEHHFHLCCILEWMERKDTCPVCDQITLVDE 173
>gi|449481398|ref|XP_004156171.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
sativus]
Length = 227
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H +HL CI EW +RS CP+C + E
Sbjct: 192 VTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDE 225
>gi|297799648|ref|XP_002867708.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313544|gb|EFH43967.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 155
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H++HL CILEW +RS+ CP+C ++ + E
Sbjct: 119 LTKCGHDFHLACILEWMERSEACPVCDKEIAITE 152
>gi|388512845|gb|AFK44484.1| unknown [Medicago truncatula]
Length = 227
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H YH CI EW +RS CP+C + + E
Sbjct: 192 VTKCNHHYHFGCIYEWMERSDSCPVCGKVMLFDE 225
>gi|449447440|ref|XP_004141476.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
sativus]
Length = 227
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H +HL CI EW +RS CP+C + E
Sbjct: 192 VTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDE 225
>gi|334188073|ref|NP_001190437.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332006989|gb|AED94372.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 296
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS+ CP+C + E
Sbjct: 259 ITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 292
>gi|9758067|dbj|BAB08646.1| unnamed protein product [Arabidopsis thaliana]
Length = 223
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS+ CP+C + E
Sbjct: 186 ITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 219
>gi|297805860|ref|XP_002870814.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297316650|gb|EFH47073.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 221
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS+ CP+C + E
Sbjct: 184 ITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 217
>gi|223973149|gb|ACN30762.1| unknown [Zea mays]
gi|414868149|tpg|DAA46706.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 184
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C+H +HL CILEW +R CP+C Q ++ E
Sbjct: 148 ITKCEHHFHLCCILEWMERKDTCPVCDQITLVDE 181
>gi|154315679|ref|XP_001557162.1| hypothetical protein BC1G_04412 [Botryotinia fuckeliana B05.10]
gi|347840072|emb|CCD54644.1| similar to PHD and RING finger domain-containing protein c
[Botryotinia fuckeliana]
Length = 683
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 3 FCLFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
C+ Q+ C H H C+ EWSQ++ CPIC F L
Sbjct: 87 LCVAQIKPCDHVLHDHCLREWSQKANSCPICRASFNL 123
>gi|195108773|ref|XP_001998967.1| GI23331 [Drosophila mojavensis]
gi|193915561|gb|EDW14428.1| GI23331 [Drosophila mojavensis]
Length = 147
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
F+V CKHE+H +CIL W +++ CPIC F + +EL
Sbjct: 83 FKVLPCKHEFHEECILLWLKKANSCPICRYIFETDDEVYEEL 124
>gi|15242393|ref|NP_197083.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|42573377|ref|NP_974785.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|9755624|emb|CAC01778.1| putative protein [Arabidopsis thaliana]
gi|22655214|gb|AAM98197.1| unknown protein [Arabidopsis thaliana]
gi|30023690|gb|AAP13378.1| At5g15790 [Arabidopsis thaliana]
gi|110738178|dbj|BAF01020.1| hypothetical protein [Arabidopsis thaliana]
gi|332004822|gb|AED92205.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332004823|gb|AED92206.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 232
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H +HL CI EW +RS+ CP+C + E
Sbjct: 197 VTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHE 230
>gi|18421807|ref|NP_568560.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|14334948|gb|AAK59651.1| unknown protein [Arabidopsis thaliana]
gi|23297720|gb|AAN12910.1| unknown protein [Arabidopsis thaliana]
gi|332006987|gb|AED94370.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 221
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS+ CP+C + E
Sbjct: 184 ITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 217
>gi|363807934|ref|NP_001241941.1| uncharacterized protein LOC100790543 [Glycine max]
gi|255641258|gb|ACU20906.1| unknown [Glycine max]
Length = 226
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H +HL CI EW +R CP+C + V E
Sbjct: 190 VTKCSHHFHLCCIYEWMERGDSCPVCGKVMVFDE 223
>gi|290979246|ref|XP_002672345.1| predicted protein [Naegleria gruberi]
gi|284085921|gb|EFC39601.1| predicted protein [Naegleria gruberi]
Length = 198
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSR--PIASA 65
+ C H +H QC EW QRS ECP+C+++ + E L +E R K + I
Sbjct: 113 LCKCSHGFHFQCSEEWKQRSNECPVCFRKLIYMYE--DEELPPVEKNRNEKKQNPTIMMR 170
Query: 66 APVTFPED 73
P+ + ED
Sbjct: 171 EPLYYSED 178
>gi|358248273|ref|NP_001240108.1| uncharacterized protein LOC100790104 [Glycine max]
gi|255637513|gb|ACU19083.1| unknown [Glycine max]
Length = 229
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS CP+C + V E
Sbjct: 192 MTKCSHHFHLGCIYEWMERSDNCPVCGKVMVFDE 225
>gi|358248876|ref|NP_001240211.1| uncharacterized protein LOC100777068 [Glycine max]
gi|255647555|gb|ACU24241.1| unknown [Glycine max]
Length = 229
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS CP+C + V E
Sbjct: 192 MTKCSHHFHLGCIYEWMERSDNCPVCGKVMVFDE 225
>gi|226500418|ref|NP_001148273.1| RHB1A [Zea mays]
gi|195617096|gb|ACG30378.1| RHB1A [Zea mays]
gi|238013430|gb|ACR37750.1| unknown [Zea mays]
gi|414868150|tpg|DAA46707.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 178
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C+H +HL CILEW +R CP+C Q ++ E
Sbjct: 142 ITKCEHHFHLCCILEWMERKDTCPVCDQITLVDE 175
>gi|413942076|gb|AFW74725.1| hypothetical protein ZEAMMB73_989714 [Zea mays]
Length = 360
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 32 ICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPVTFPE--DFDNGPDGTYFDYDDME 89
+CWQ +K+P QELL A+E ER ++ P + P DF+ P G D ++E
Sbjct: 1 MCWQHISMKDPMSQELLEAVEQERNIRANPSRNTVVFHHPMLGDFEI-PVGA--DDAELE 57
Query: 90 ARIMQHLAAA 99
RI+QHLAAA
Sbjct: 58 ERIIQHLAAA 67
>gi|90657595|gb|ABD96894.1| hypothetical protein [Cleome spinosa]
Length = 229
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H +HL CI EW +RS+ CP+C + E
Sbjct: 194 VTKCSHHFHLGCIYEWMERSENCPVCGKVMEFNE 227
>gi|79324959|ref|NP_001031564.1| RING-H2 finger B1A [Arabidopsis thaliana]
gi|332656461|gb|AEE81861.1| RING-H2 finger B1A [Arabidopsis thaliana]
Length = 189
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
T C+HE+HL C+LEW +RS CPIC
Sbjct: 155 TKCEHEFHLSCLLEWIERSDRCPIC 179
>gi|158294854|ref|XP_315856.4| AGAP005831-PA [Anopheles gambiae str. PEST]
gi|157015758|gb|EAA11563.4| AGAP005831-PA [Anopheles gambiae str. PEST]
Length = 1258
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFV 38
SCKH++ +C+LEWS+ ECP+C Q+F+
Sbjct: 65 SCKHQFCFRCLLEWSKVKPECPLCKQRFL 93
>gi|16519466|gb|AAL25175.1|AC079852_8 Putative RING-H2 finger protein RHB1a [Oryza sativa]
gi|19919983|gb|AAM08431.1|AC112513_17 Putative RING-H2 finger protein RHB1a [Oryza sativa]
Length = 167
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQ 35
+T C+H +HL CILEW +RS+ CP+C Q
Sbjct: 124 MTKCEHHFHLCCILEWMERSETCPVCDQ 151
>gi|388498766|gb|AFK37449.1| unknown [Lotus japonicus]
Length = 229
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H YHL CI EW +RS CP+C + E
Sbjct: 194 MTKCSHHYHLGCIYEWMERSDSCPVCGKVMDFDE 227
>gi|218184135|gb|EEC66562.1| hypothetical protein OsI_32723 [Oryza sativa Indica Group]
gi|222612428|gb|EEE50560.1| hypothetical protein OsJ_30697 [Oryza sativa Japonica Group]
Length = 161
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQ 35
+T C+H +HL CILEW +RS+ CP+C Q
Sbjct: 118 MTKCEHHFHLCCILEWMERSETCPVCDQ 145
>gi|9758044|dbj|BAB08507.1| unnamed protein product [Arabidopsis thaliana]
Length = 226
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQ-QFVL 39
V C H +HL CILEW +RS+ CP+C + QF L
Sbjct: 176 VAKCDHHFHLACILEWMERSETCPVCNKAQFSL 208
>gi|25012323|gb|AAN71273.1| LP11469p, partial [Drosophila melanogaster]
Length = 172
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
+++ CKHE+H +CIL W +++ CP+C + +P +EL
Sbjct: 108 YRILPCKHEFHEECILLWLKKTNSCPLCRYELETDDPVYEEL 149
>gi|24647993|ref|NP_650729.1| CG7694, isoform A [Drosophila melanogaster]
gi|221379891|ref|NP_001138076.1| CG7694, isoform B [Drosophila melanogaster]
gi|75026782|sp|Q9VE61.1|RN181_DROME RecName: Full=E3 ubiquitin-protein ligase RNF181 homolog; AltName:
Full=RING finger protein 181 homolog
gi|7300410|gb|AAF55568.1| CG7694, isoform A [Drosophila melanogaster]
gi|220903128|gb|ACL83534.1| CG7694, isoform B [Drosophila melanogaster]
gi|220950622|gb|ACL87854.1| CG7694-PA [synthetic construct]
gi|220959338|gb|ACL92212.1| CG7694-PA [synthetic construct]
Length = 147
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
+++ CKHE+H +CIL W +++ CP+C + +P +EL
Sbjct: 83 YRILPCKHEFHEECILLWLKKTNSCPLCRYELETDDPVYEEL 124
>gi|110288600|gb|ABG65911.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
Length = 156
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 4/36 (11%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC----WQQFVL 39
+T C+H +HL CILEW +RS+ CP+C W ++L
Sbjct: 120 MTKCEHHFHLCCILEWMERSETCPVCDQPWWPWWIL 155
>gi|224120794|ref|XP_002330953.1| predicted protein [Populus trichocarpa]
gi|222873147|gb|EEF10278.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS CP+C + V E
Sbjct: 190 MTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDE 223
>gi|297828674|ref|XP_002882219.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328059|gb|EFH58478.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 231
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H +HL CI EW +RS+ CP+C + E
Sbjct: 196 VTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNE 229
>gi|115485147|ref|NP_001067717.1| Os11g0294600 [Oryza sativa Japonica Group]
gi|62734051|gb|AAX96160.1| Zinc finger, C3HC4 type (RING finger), putative [Oryza sativa
Japonica Group]
gi|108864266|gb|ABG22454.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|108864267|gb|ABG22455.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113644939|dbj|BAF28080.1| Os11g0294600 [Oryza sativa Japonica Group]
gi|215715247|dbj|BAG94998.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741480|dbj|BAG97975.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185604|gb|EEC68031.1| hypothetical protein OsI_35849 [Oryza sativa Indica Group]
gi|222615859|gb|EEE51991.1| hypothetical protein OsJ_33678 [Oryza sativa Japonica Group]
Length = 173
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C+H +HL CILEW +RS CP+C Q ++ +
Sbjct: 137 LTKCEHHFHLCCILEWMERSDTCPVCDQITLIDD 170
>gi|18396135|ref|NP_566169.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75301346|sp|Q8LE94.1|RING3_ARATH RecName: Full=E3 ubiquitin-protein ligase At3g02290; AltName:
Full=RING finger protein At3g02290
gi|21553680|gb|AAM62773.1| unknown [Arabidopsis thaliana]
gi|88196731|gb|ABD43008.1| At3g02290 [Arabidopsis thaliana]
gi|332640267|gb|AEE73788.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 231
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H +HL CI EW +RS+ CP+C + E
Sbjct: 196 VTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNE 229
>gi|115481108|ref|NP_001064147.1| Os10g0142100 [Oryza sativa Japonica Group]
gi|78707751|gb|ABB46726.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|110288599|gb|ABB46725.2| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113638756|dbj|BAF26061.1| Os10g0142100 [Oryza sativa Japonica Group]
gi|215701194|dbj|BAG92618.1| unnamed protein product [Oryza sativa Japonica Group]
gi|347737166|gb|AEP20540.1| zinc finger C3H4 type family protein [Oryza sativa Japonica Group]
Length = 156
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQ 35
+T C+H +HL CILEW +RS+ CP+C Q
Sbjct: 120 MTKCEHHFHLCCILEWMERSETCPVCDQ 147
>gi|194900172|ref|XP_001979631.1| GG22947 [Drosophila erecta]
gi|190651334|gb|EDV48589.1| GG22947 [Drosophila erecta]
Length = 147
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
+++ CKHE+H +CIL W +++ CP+C + +P +EL
Sbjct: 83 YRILPCKHEFHEECILLWLKKTNSCPLCRYELETDDPVYEEL 124
>gi|297814303|ref|XP_002875035.1| ring-H2 finger B1A [Arabidopsis lyrata subsp. lyrata]
gi|297320872|gb|EFH51294.1| ring-H2 finger B1A [Arabidopsis lyrata subsp. lyrata]
Length = 190
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
T+C+H++HL C+L W +RS CPIC ++ V +
Sbjct: 155 TNCEHDFHLSCLLGWIERSDRCPICDKEVVFDD 187
>gi|225451825|ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Vitis vinifera]
gi|298204451|emb|CBI16931.3| unnamed protein product [Vitis vinifera]
Length = 225
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS+ CP+C + + E
Sbjct: 190 MTKCSHHFHLGCIYEWMERSETCPVCGKVMMFDE 223
>gi|388511135|gb|AFK43629.1| unknown [Lotus japonicus]
Length = 229
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS CP+C + + E
Sbjct: 192 MTKCSHHFHLGCIYEWMERSDNCPVCGKVMLFDE 225
>gi|115441961|ref|NP_001045260.1| Os01g0926200 [Oryza sativa Japonica Group]
gi|57900128|dbj|BAD88190.1| zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa
Japonica Group]
gi|113534791|dbj|BAF07174.1| Os01g0926200 [Oryza sativa Japonica Group]
gi|215707113|dbj|BAG93573.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189648|gb|EEC72075.1| hypothetical protein OsI_05009 [Oryza sativa Indica Group]
gi|222619796|gb|EEE55928.1| hypothetical protein OsJ_04613 [Oryza sativa Japonica Group]
Length = 229
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+ C H YHL CI EW +RS CPIC ++ E
Sbjct: 194 IAKCSHHYHLSCIYEWMERSDTCPICGKEMEFCE 227
>gi|90657638|gb|ABD96936.1| hypothetical protein [Cleome spinosa]
Length = 278
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
VT C H +HL CI EW +RS+ CP+C
Sbjct: 243 VTKCSHHFHLGCIYEWMERSENCPVC 268
>gi|169806336|ref|XP_001827913.1| hypothetical protein EBI_26427 [Enterocytozoon bieneusi H348]
gi|269861039|ref|XP_002650235.1| hypothetical protein EBI_25437 [Enterocytozoon bieneusi H348]
gi|161779361|gb|EDQ31384.1| hypothetical protein EBI_26427 [Enterocytozoon bieneusi H348]
gi|220066325|gb|EED43811.1| hypothetical protein EBI_25437 [Enterocytozoon bieneusi H348]
Length = 93
Score = 45.4 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
C+ C H +HL C+ EW+++++ CPIC + FV+
Sbjct: 51 CVPVTGECSHTFHLHCLEEWTEKNENCPICRKLFVI 86
>gi|224119288|ref|XP_002331274.1| predicted protein [Populus trichocarpa]
gi|222873699|gb|EEF10830.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS CP+C + V E
Sbjct: 192 MTKCTHHFHLGCIYEWMERSDSCPVCGKVMVFDE 225
>gi|225425294|ref|XP_002268079.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290 isoform 1 [Vitis
vinifera]
gi|359473838|ref|XP_003631366.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290 isoform 2 [Vitis
vinifera]
gi|296085542|emb|CBI29274.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
T C H +HL CI EW +RS+ CPIC ++ E
Sbjct: 197 TTQCSHHFHLGCIYEWMERSESCPICGKEMEFCE 230
>gi|440639011|gb|ELR08930.1| hypothetical protein GMDG_03597 [Geomyces destructans 20631-21]
Length = 622
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 2 QFCLFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRP 61
Q L + +C H H C+ EW Q++ CPIC QQF L E + + + + +
Sbjct: 51 QQLLAVIQTCGHILHDSCLKEWIQKANSCPICRQQFNLVEVHDKTSGPILSTYTVEDKKQ 110
Query: 62 IASAAPVTFPED 73
+A P+ + ED
Sbjct: 111 VADFDPLAWIED 122
>gi|6041807|gb|AAF02127.1|AC009755_20 unknown protein [Arabidopsis thaliana]
Length = 67
Score = 45.4 bits (106), Expect = 0.039, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
VT C H +HL CI EW +RS+ CP+C
Sbjct: 32 VTKCSHHFHLSCIYEWMERSENCPVC 57
>gi|255569920|ref|XP_002525923.1| 60S ribosomal protein L7a, putative [Ricinus communis]
gi|223534752|gb|EEF36443.1| 60S ribosomal protein L7a, putative [Ricinus communis]
Length = 570
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
VT C H +HL CI EW +RS CP+C
Sbjct: 192 VTKCSHHFHLGCIYEWMERSDSCPVC 217
>gi|226494656|ref|NP_001149175.1| LOC100282797 [Zea mays]
gi|194706242|gb|ACF87205.1| unknown [Zea mays]
gi|195625262|gb|ACG34461.1| protein binding protein [Zea mays]
gi|224029405|gb|ACN33778.1| unknown [Zea mays]
gi|414878907|tpg|DAA56038.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414878908|tpg|DAA56039.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 225
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS CPIC ++ E
Sbjct: 190 ITKCCHHFHLGCIYEWMERSDTCPICGKEMEFCE 223
>gi|242055471|ref|XP_002456881.1| hypothetical protein SORBIDRAFT_03g044490 [Sorghum bicolor]
gi|241928856|gb|EES02001.1| hypothetical protein SORBIDRAFT_03g044490 [Sorghum bicolor]
Length = 229
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS CPIC ++ E
Sbjct: 194 ITKCCHHFHLGCIYEWMERSDTCPICGKEMEFCE 227
>gi|413923125|gb|AFW63057.1| putative bZIP transcription factor superfamily protein [Zea mays]
Length = 232
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLK 40
L +T C+H +HL CILEW +R CP+C Q K
Sbjct: 65 LRSITKCEHHFHLCCILEWMERKDTCPVCDQNMATK 100
>gi|226530951|ref|NP_001148744.1| protein binding protein [Zea mays]
gi|195621784|gb|ACG32722.1| protein binding protein [Zea mays]
Length = 205
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
CKH +HL CI EW +RS+ CP+C + + E
Sbjct: 173 CKHNFHLSCIYEWMERSQACPVCAKTMLFNE 203
>gi|147771744|emb|CAN78164.1| hypothetical protein VITISV_040926 [Vitis vinifera]
Length = 244
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
T C H +HL CI EW +RS+ CPIC
Sbjct: 161 TTQCSHHFHLGCIYEWMERSESCPIC 186
>gi|414871688|tpg|DAA50245.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 205
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
CKH +HL CI EW +RS+ CP+C + + E
Sbjct: 173 CKHNFHLSCIYEWMERSQACPVCAKTMLFNE 203
>gi|90657551|gb|ABD96851.1| hypothetical protein [Cleome spinosa]
Length = 230
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
VT C H +HL CI EW +RS+ CP+C + E
Sbjct: 195 VTKCFHHFHLACIYEWMERSENCPVCGKVMEFNE 228
>gi|413936568|gb|AFW71119.1| hypothetical protein ZEAMMB73_957947 [Zea mays]
Length = 328
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
+T C H +HL CI EW +RS CPIC
Sbjct: 210 ITKCCHHFHLGCIYEWMERSDTCPIC 235
>gi|226498246|ref|NP_001149943.1| protein binding protein [Zea mays]
gi|195635651|gb|ACG37294.1| protein binding protein [Zea mays]
gi|413955854|gb|AFW88503.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413955855|gb|AFW88504.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 309
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPA 43
CKH +H QCIL W + CP+C Q +EPA
Sbjct: 232 CKHRFHDQCILPWLEMHSSCPVCRHQLPTEEPA 264
>gi|297738120|emb|CBI27321.3| unnamed protein product [Vitis vinifera]
Length = 141
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
VT C H +HL CI EW +RS+ CP+C
Sbjct: 92 VTQCSHHFHLGCIYEWLERSQTCPVC 117
>gi|168066654|ref|XP_001785249.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663154|gb|EDQ49935.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 57
Score = 44.7 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
T C H +HL CI EW +RS CPIC
Sbjct: 29 TGCGHNFHLACIYEWMERSNRCPIC 53
>gi|222616277|gb|EEE52409.1| hypothetical protein OsJ_34516 [Oryza sativa Japonica Group]
Length = 219
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
V C H +HL CI EW +RS+ CP+C ++ E
Sbjct: 184 VMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDE 217
>gi|217073306|gb|ACJ85012.1| unknown [Medicago truncatula]
Length = 229
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS CP+C ++ E
Sbjct: 192 MTKCSHHFHLGCIYEWMERSDNCPVCGKEMDFDE 225
>gi|357121209|ref|XP_003562313.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Brachypodium
distachyon]
Length = 207
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C H YHL CI EW +RS+ CP+C + + E
Sbjct: 175 CNHSYHLGCIYEWMERSQSCPVCAKVMLFNE 205
>gi|195037553|ref|XP_001990225.1| GH18348 [Drosophila grimshawi]
gi|193894421|gb|EDV93287.1| GH18348 [Drosophila grimshawi]
Length = 147
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
F++ CKHE+H +CI+ W +++ CPIC F + +EL
Sbjct: 83 FKILPCKHEFHEECIMLWLKKANSCPICRYIFETDDEVYEEL 124
>gi|20160724|dbj|BAB89666.1| P0482D04.13 [Oryza sativa Japonica Group]
Length = 235
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
+ C H YHL CI EW +RS CPIC
Sbjct: 194 IAKCSHHYHLSCIYEWMERSDTCPIC 219
>gi|297820704|ref|XP_002878235.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297324073|gb|EFH54494.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 237
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQE 46
+T CKH +H +CI+ W + +CP+C +FV+ +PA QE
Sbjct: 159 LTPCKHMFHEECIIPWLKTKGQCPVC--RFVILKPAKQE 195
>gi|357126608|ref|XP_003564979.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Brachypodium
distachyon]
Length = 229
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL CI EW +RS CP+C ++ E
Sbjct: 194 ITKCSHHFHLSCIYEWMERSDTCPMCGKEMEFCE 227
>gi|72392753|ref|XP_847177.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359222|gb|AAX79665.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70803207|gb|AAZ13111.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 295
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+ ++ CKH +H CI EW ++K+CP+C Q+ V
Sbjct: 262 VVELNRCKHVFHRTCIREWLLKNKKCPVCTQEVV 295
>gi|261330436|emb|CBH13420.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 295
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+ ++ CKH +H CI EW ++K+CP+C Q+ V
Sbjct: 262 VVELNRCKHVFHRTCIREWLLKNKKCPVCTQEVV 295
>gi|413933697|gb|AFW68248.1| putative RING zinc finger domain superfamily protein, partial
[Zea mays]
Length = 85
Score = 44.7 bits (104), Expect = 0.068, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
V CKH +HL CI EW +RS+ CPI Q + E
Sbjct: 50 VLQCKHNFHLSCIYEWMERSQACPIYVQIMLFNE 83
>gi|195455572|ref|XP_002074780.1| GK22967 [Drosophila willistoni]
gi|194170865|gb|EDW85766.1| GK22967 [Drosophila willistoni]
Length = 429
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
VT+C H +H QC+++W QRS+ CP C
Sbjct: 21 VTTCGHMFHHQCLMQWLQRSQTCPQC 46
>gi|389601783|ref|XP_001565889.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505185|emb|CAM45407.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 421
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+C+H +HL C++EW QRS CP+C
Sbjct: 233 ACQHHFHLPCLMEWKQRSSLCPMC 256
>gi|157106776|ref|XP_001649476.1| hypothetical protein AaeL_AAEL014744 [Aedes aegypti]
gi|108868773|gb|EAT32998.1| AAEL014744-PA [Aedes aegypti]
Length = 428
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
VT C H +H CIL+W +RSK CP C + +
Sbjct: 18 IHVTPCGHAFHYLCILQWLERSKTCPECRNKCI 50
>gi|357156048|ref|XP_003577324.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Brachypodium
distachyon]
Length = 221
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
V C H +HL CI EW +RS+ CP+C ++ E
Sbjct: 186 VMQCSHHFHLGCIYEWMERSEACPVCGKKMEFNE 219
>gi|66804691|ref|XP_636078.1| hypothetical protein DDB_G0289719 [Dictyostelium discoideum AX4]
gi|60464424|gb|EAL62571.1| hypothetical protein DDB_G0289719 [Dictyostelium discoideum AX4]
Length = 1419
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+ C H++ +CILEWS+++ CP+C +FV
Sbjct: 868 ICGCTHKFCFECILEWSKQTNTCPLCKSRFV 898
>gi|242038903|ref|XP_002466846.1| hypothetical protein SORBIDRAFT_01g015120 [Sorghum bicolor]
gi|241920700|gb|EER93844.1| hypothetical protein SORBIDRAFT_01g015120 [Sorghum bicolor]
Length = 211
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
V C H +HL CI EW +RS+ CP+C + + E
Sbjct: 176 VLQCNHNFHLSCIYEWMERSEACPVCAKIMLFNE 209
>gi|50554745|ref|XP_504781.1| YALI0E34650p [Yarrowia lipolytica]
gi|49650650|emb|CAG80388.1| YALI0E34650p [Yarrowia lipolytica CLIB122]
Length = 545
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H +H C+ WSQRS CP+C QQF
Sbjct: 21 CGHWFHFDCLHLWSQRSSSCPMCRQQF 47
>gi|389593347|ref|XP_003721927.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438429|emb|CBZ12184.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 415
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFV 38
+C+H +HL C++EW QRS CP+C + +
Sbjct: 232 ACQHHFHLPCLMEWKQRSSLCPMCCAETL 260
>gi|224286980|gb|ACN41191.1| unknown [Picea sitchensis]
Length = 228
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C H +HL CI EW +RS+ CP+C ++ V E
Sbjct: 196 CGHHFHLGCIYEWMERSENCPVCNKEMVFSE 226
>gi|156033159|ref|XP_001585416.1| hypothetical protein SS1G_13655 [Sclerotinia sclerotiorum 1980]
gi|154699058|gb|EDN98796.1| hypothetical protein SS1G_13655 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 670
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 3 FCLFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
C+ Q+ C H H C+ WSQ++ CPIC F L
Sbjct: 83 LCVAQIKPCDHVLHDHCLRAWSQKANSCPICRASFNL 119
>gi|195625102|gb|ACG34381.1| protein binding protein [Zea mays]
gi|195656721|gb|ACG47828.1| protein binding protein [Zea mays]
Length = 219
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
V C H +HL CI EW +RS+ CP+C ++ E
Sbjct: 184 VMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDE 217
>gi|325180704|emb|CCA15109.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 591
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 2 QFCLFQ---VTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+F L Q + SC H++H +CI+ WS+ + CP+C Q+F
Sbjct: 42 EFVLAQQGSLPSCDHKFHFECIMTWSKITNLCPLCKQKF 80
>gi|413920382|gb|AFW60314.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 219
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
V C H +HL CI EW +RS+ CP+C ++ E
Sbjct: 184 VMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDE 217
>gi|190344555|gb|EDK36246.2| hypothetical protein PGUG_00344 [Meyerozyma guilliermondii ATCC
6260]
Length = 370
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPIC 33
+ T+CKH +HLQC+ EW+ ++ CP+C
Sbjct: 340 RTTTCKHSFHLQCLHEWANYAETCPVC 366
>gi|146422050|ref|XP_001486967.1| hypothetical protein PGUG_00344 [Meyerozyma guilliermondii ATCC
6260]
Length = 370
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPIC 33
+ T+CKH +HLQC+ EW+ ++ CP+C
Sbjct: 340 RTTTCKHSFHLQCLHEWANYAETCPVC 366
>gi|296085296|emb|CBI29028.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH +CI W Q +K CPIC
Sbjct: 273 LTVLSCKHSYHSECINNWLQINKVCPIC 300
>gi|339898670|ref|XP_003392659.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321398451|emb|CBZ08838.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 415
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFV 38
+C+H +HL C++EW QRS CP+C + +
Sbjct: 232 ACQHHFHLPCLMEWKQRSSLCPMCCAETL 260
>gi|195395216|ref|XP_002056232.1| GJ10332 [Drosophila virilis]
gi|194142941|gb|EDW59344.1| GJ10332 [Drosophila virilis]
Length = 114
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
F++ CKHE+H +CIL W +++ CPIC F + +EL
Sbjct: 50 FKILPCKHEFHEECILLWLKKANSCPICRFIFETDDEVYEEL 91
>gi|398017552|ref|XP_003861963.1| hypothetical protein, conserved [Leishmania donovani]
gi|322500191|emb|CBZ35268.1| hypothetical protein, conserved [Leishmania donovani]
Length = 415
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFV 38
+C+H +HL C++EW QRS CP+C + +
Sbjct: 232 ACQHHFHLPCLMEWKQRSSLCPMCCAETL 260
>gi|401424419|ref|XP_003876695.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492938|emb|CBZ28219.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 406
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+C+H +HL C++EW QRS CP+C
Sbjct: 232 ACQHHFHLPCLMEWKQRSSLCPMC 255
>gi|115486339|ref|NP_001068313.1| Os11g0629300 [Oryza sativa Japonica Group]
gi|77552144|gb|ABA94941.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|77552145|gb|ABA94942.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113645535|dbj|BAF28676.1| Os11g0629300 [Oryza sativa Japonica Group]
gi|215767806|dbj|BAH00035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 220
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
V C H +HL CI EW +RS+ CP+C ++ E
Sbjct: 185 VMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDE 218
>gi|413920380|gb|AFW60312.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 35
Score = 43.9 bits (102), Expect = 0.099, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C H +HL CI EW +RS+ CP+C ++ E
Sbjct: 3 CSHHFHLGCIYEWMERSEACPVCGKKMEFDE 33
>gi|168004786|ref|XP_001755092.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693685|gb|EDQ80036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 57
Score = 43.9 bits (102), Expect = 0.099, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQF 37
T C H +HL CI EW +RS CP+C + F
Sbjct: 29 TECGHYFHLSCIYEWMERSNHCPLCDKVF 57
>gi|301114455|ref|XP_002998997.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111091|gb|EEY69143.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 410
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAA 66
Q++ C H H +CI W Q CP+C ++ V E A + + ++K R +S+
Sbjct: 136 QLSECGHLIHAKCIKRWIQSGTCCPVCREEVVDVEEAFTSPVKGLHP--MTKDRLTSSSE 193
Query: 67 PVTFPED------FDNGPDGTYF-DYDDMEARIMQHLAAARYFRRREMQRYPALDASQ 117
PED D G D +F D+D+ + + + + Y RR + +PA +SQ
Sbjct: 194 ATCLPEDDEDRQTEDAGYDWGWFQDFDEADD-VSDNGSDMFYSSRRSLPTFPASASSQ 250
>gi|153792182|ref|NP_001093198.1| E3 ubiquitin-protein ligase RLIM [Bos taurus]
gi|148743954|gb|AAI42440.1| RNF12 protein [Bos taurus]
gi|296470605|tpg|DAA12720.1| TPA: ring finger protein, LIM domain interacting [Bos taurus]
Length = 634
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ +V C HEYH QCI +W + CPIC
Sbjct: 592 MLRVLPCSHEYHYQCIDQWLEEHSNCPIC 620
>gi|449016625|dbj|BAM80027.1| similar to ring finger protein [Cyanidioschyzon merolae strain 10D]
Length = 285
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
SC H +H CI +W QR+ CP+C + V E Q+L
Sbjct: 174 SCGHLFHSHCISKWVQRANRCPLCQHEIVRLEEVVQDL 211
>gi|118386805|ref|XP_001026520.1| hypothetical protein TTHERM_00328560 [Tetrahymena thermophila]
gi|89308287|gb|EAS06275.1| hypothetical protein TTHERM_00328560 [Tetrahymena thermophila
SB210]
Length = 870
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERL 56
T C H +H QC+ +W Q++ CPIC Q+F +++ I S++L
Sbjct: 589 TICNHTFHSQCLNDWLQKNDNCPICRQEF-----GINQMIEYIVSKKL 631
>gi|118386807|ref|XP_001026521.1| hypothetical protein TTHERM_00328570 [Tetrahymena thermophila]
gi|89308288|gb|EAS06276.1| hypothetical protein TTHERM_00328570 [Tetrahymena thermophila
SB210]
Length = 883
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
Q T C H +H++CI +W Q++ CP+C Q F
Sbjct: 579 QKTICSHTFHIECIQDWIQKNDNCPLCRQSF 609
>gi|157119515|ref|XP_001653408.1| hypothetical protein AaeL_AAEL008683 [Aedes aegypti]
gi|108875296|gb|EAT39521.1| AAEL008683-PA [Aedes aegypti]
Length = 997
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC+H++ +C+LEWS+ ECP+C Q F
Sbjct: 80 SCRHQFCYRCLLEWSKIKAECPLCKQAF 107
>gi|297793133|ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310286|gb|EFH40710.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPVTF 70
CKH++H++CI+ W + CP+C +F L A + I+SER ++R + +
Sbjct: 275 CKHKFHIRCIVPWLELHSSCPVC--RFELPSSADDDDETKIDSERPPRTRNVGESNNRNI 332
Query: 71 PEDFDNGPDG 80
E+ N G
Sbjct: 333 VENVGNAERG 342
>gi|403361600|gb|EJY80501.1| Ring finger protein, putative [Oxytricha trifallax]
Length = 349
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPIC 33
C+F++ C H+YH CI EW + +CP+C
Sbjct: 313 CIFKILKCSHKYHSNCIDEWLKTKLQCPLC 342
>gi|359484061|ref|XP_002270577.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Vitis vinifera]
Length = 452
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH +CI W Q +K CPIC
Sbjct: 417 LTVLSCKHSYHSECINNWLQINKVCPIC 444
>gi|206598121|gb|ACI15930.1| hypothetical protein [Bodo saltans]
Length = 575
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
V C HE+H QC+ W R ++CP+C ++ Q LLA + E+ ++ P P
Sbjct: 389 VLPCHHEFHAQCLQSWLLRKRQCPVC------RDDPWQRLLANLRREQQDETTP-----P 437
Query: 68 VTFPEDFDN 76
+ +D +
Sbjct: 438 IALQQDVQD 446
>gi|357452157|ref|XP_003596355.1| RING finger-like protein [Medicago truncatula]
gi|355485403|gb|AES66606.1| RING finger-like protein [Medicago truncatula]
Length = 336
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
+ CKHEYH++CI W ECPIC
Sbjct: 299 ILQCKHEYHVECIQNWLVIKNECPIC 324
>gi|219118596|ref|XP_002180067.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408324|gb|EEC48258.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 397
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 10 SCKHEYHLQCILEWSQRSKE--CPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+C+H +H CIL W + +E CP+C Q+F C + A+E S + A P
Sbjct: 234 ACQHAFHRDCILSWLSKKEEPQCPVCRQEF------CS--VPAMEEAPTSSNSTNAFTHP 285
Query: 68 VTFPEDFDNG 77
++PE F N
Sbjct: 286 FSYPESFSNA 295
>gi|342182210|emb|CCC91689.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 146
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V C H +HLQCI +W QRS CP+C
Sbjct: 80 VVGCDHSFHLQCIEDWRQRSPVCPMC 105
>gi|326496256|dbj|BAJ94590.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V C H +HL CI EW +RS+ CP+C
Sbjct: 173 VMQCSHHFHLGCIYEWIERSEACPVC 198
>gi|224057856|ref|XP_002299358.1| predicted protein [Populus trichocarpa]
gi|222846616|gb|EEE84163.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
T C H +HL CI EW +RS+ CPIC
Sbjct: 194 TTRCSHHFHLGCIYEWLERSESCPIC 219
>gi|190347594|gb|EDK39895.2| hypothetical protein PGUG_03993 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIAS 64
L V+ C+H YH C+L+W S CP C Q F + ++ + S R +
Sbjct: 17 LGVVSGCRHHYHEHCLLQWCSHSNSCPSCRQLF--------NAVFVVDQQTGSVKRRVVI 68
Query: 65 AAPVTFPEDFDNGP 78
+ F + +N P
Sbjct: 69 QNKILFTDSIENIP 82
>gi|146414588|ref|XP_001483264.1| hypothetical protein PGUG_03993 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIAS 64
L V+ C+H YH C+L+W S CP C Q F + ++ + S R +
Sbjct: 17 LGVVSGCRHHYHEHCLLQWCSHSNSCPSCRQLF--------NAVFVVDQQTGSVKRRVVI 68
Query: 65 AAPVTFPEDFDNGP 78
+ F + +N P
Sbjct: 69 QNKILFTDSIENIP 82
>gi|170036989|ref|XP_001846343.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167879971|gb|EDS43354.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 449
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+T C H +H C+L+W QRSK CP C
Sbjct: 18 IHMTPCGHAFHYACLLQWLQRSKTCPQC 45
>gi|195145721|ref|XP_002013840.1| GL24351 [Drosophila persimilis]
gi|194102783|gb|EDW24826.1| GL24351 [Drosophila persimilis]
Length = 147
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
++++ CKHE+H +CIL W +++ CP+C + + +EL
Sbjct: 82 VYKILPCKHEFHEECILLWLKKANSCPLCRYELETDDAVYEEL 124
>gi|168034252|ref|XP_001769627.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679169|gb|EDQ65620.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 306
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLK 40
CKH YH +CI +W Q +K CP+C + ++
Sbjct: 266 CKHHYHSECIQQWLQHNKVCPVCSAEVTIE 295
>gi|157138189|ref|XP_001664167.1| hypothetical protein AaeL_AAEL003787 [Aedes aegypti]
gi|108880652|gb|EAT44877.1| AAEL003787-PA [Aedes aegypti]
Length = 426
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLK 40
VT C H +H CIL+W +RSK CP C + + K
Sbjct: 20 VTPCGHAFHYFCILQWLERSKTCPECRSKCIAK 52
>gi|125774551|ref|XP_001358534.1| GA20524 [Drosophila pseudoobscura pseudoobscura]
gi|54638273|gb|EAL27675.1| GA20524 [Drosophila pseudoobscura pseudoobscura]
Length = 147
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
++++ CKHE+H +CIL W +++ CP+C + + +EL
Sbjct: 82 VYKILPCKHEFHEECILLWLKKTNSCPLCRYELETDDVVYEEL 124
>gi|326513928|dbj|BAJ92114.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519763|dbj|BAK00254.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 201
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
V C H +HL CI EW +RS+ C +C + + KE
Sbjct: 166 VLQCNHNFHLSCIYEWMERSQSCAVCAKVMLFKE 199
>gi|307107304|gb|EFN55547.1| hypothetical protein CHLNCDRAFT_18021, partial [Chlorella
variabilis]
Length = 56
Score = 43.1 bits (100), Expect = 0.19, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +HL C+ EW +RS+ CP+C + +E
Sbjct: 23 LTRCNHHFHLPCLYEWLERSETCPVCSKPMAFEE 56
>gi|195452876|ref|XP_002073539.1| GK13091 [Drosophila willistoni]
gi|194169624|gb|EDW84525.1| GK13091 [Drosophila willistoni]
Length = 147
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
+++ CKHE+H +CIL W +++ CP+C + + +EL
Sbjct: 83 YKILPCKHEFHEECILLWLKKANSCPLCRYELETDDEVYEEL 124
>gi|3451070|emb|CAA20466.1| putative protein [Arabidopsis thaliana]
gi|7269193|emb|CAB79300.1| putative protein [Arabidopsis thaliana]
Length = 189
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
+T C H++HL CIL W +RS+ CP+C
Sbjct: 119 LTKCGHDFHLACILAWMERSEACPVC 144
>gi|358420655|ref|XP_002706238.2| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Bos taurus]
Length = 673
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ ++ C HEYH QCI +W + CPIC
Sbjct: 591 MLRILPCSHEYHYQCIDQWLEEHPNCPIC 619
>gi|119920448|ref|XP_599349.3| PREDICTED: E3 ubiquitin-protein ligase RLIM [Bos taurus]
Length = 672
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ ++ C HEYH QCI +W + CPIC
Sbjct: 590 MLRILPCSHEYHYQCIDQWLEEHPNCPIC 618
>gi|452820771|gb|EME27809.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 211
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V C H YHL C+ EW +RS CPIC
Sbjct: 167 VAKCGHSYHLACLYEWLERSPYCPIC 192
>gi|440902761|gb|ELR53511.1| hypothetical protein M91_16323 [Bos grunniens mutus]
Length = 633
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ ++ C HEYH QCI +W + CPIC
Sbjct: 591 MLRILPCSHEYHYQCIDQWLEEHPNCPIC 619
>gi|403352587|gb|EJY75812.1| hypothetical protein OXYTRI_02797 [Oxytricha trifallax]
Length = 653
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPIC 33
C+F++ C H+YH CI EW + +CP+C
Sbjct: 617 CIFKMLKCSHKYHSNCIDEWLKTKLQCPLC 646
>gi|390337248|ref|XP_003724518.1| PREDICTED: uncharacterized protein LOC100890761 [Strongylocentrotus
purpuratus]
Length = 955
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 1 MQFCLFQVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
M+ L Q+ CKH +H +CI W Q+S CP+C +
Sbjct: 914 MEEILDQL-PCKHNFHNKCITVWLQKSGTCPVCRHKL 949
>gi|226496171|ref|NP_001141462.1| uncharacterized protein LOC100273572 [Zea mays]
gi|194689212|gb|ACF78690.1| unknown [Zea mays]
gi|413920383|gb|AFW60315.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 356
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
V C H +HL CI EW +RS+ CP+C ++ E
Sbjct: 321 VMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDE 354
>gi|72391896|ref|XP_846242.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176262|gb|AAX70377.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802778|gb|AAZ12683.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261329843|emb|CBH12826.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 209
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V C H +HLQC+ +W QRS CP+C
Sbjct: 80 VVGCGHSFHLQCVEDWRQRSPICPVC 105
>gi|367047503|ref|XP_003654131.1| hypothetical protein THITE_2116873 [Thielavia terrestris NRRL
8126]
gi|347001394|gb|AEO67795.1| hypothetical protein THITE_2116873 [Thielavia terrestris NRRL
8126]
Length = 95
Score = 42.7 bits (99), Expect = 0.24, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSK---ECPICWQQFVLKEP 42
C C H +H+ CILEW ++ +CP+C Q+F EP
Sbjct: 45 CSLLSGKCGHNFHMHCILEWIKQDSAKGQCPMCRQRFEWTEP 86
>gi|270006091|gb|EFA02539.1| hypothetical protein TcasGA2_TC008244 [Tribolium castaneum]
Length = 747
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+ SC+HE+H QCI W +R CP+C V+ E
Sbjct: 706 HMLSCQHEFHKQCITNWLKRQSACPVCRVHAVIDE 740
>gi|195120676|ref|XP_002004847.1| GI19373 [Drosophila mojavensis]
gi|193909915|gb|EDW08782.1| GI19373 [Drosophila mojavensis]
Length = 429
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
VTSC H +H C+++W +RSK CP C
Sbjct: 21 VTSCGHMFHHTCLMQWLERSKTCPQC 46
>gi|170030942|ref|XP_001843346.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167868826|gb|EDS32209.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 755
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC+H++ +C+LEWS+ ECP+C Q F
Sbjct: 80 SCRHQFCYRCLLEWSKIKAECPLCKQVF 107
>gi|221506468|gb|EEE32085.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 730
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
L ++ C H +HL CI WS+R CP+C F
Sbjct: 365 LGKIECCSHNFHLHCIEGWSRRETTCPLCKAVFT 398
>gi|221486766|gb|EEE25012.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 726
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
L ++ C H +HL CI WS+R CP+C F
Sbjct: 361 LGKIECCSHNFHLHCIEGWSRRETTCPLCKAVFT 394
>gi|340058332|emb|CCC52687.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 322
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+C H +H+QC++ W QRS CP+C
Sbjct: 164 NCMHHFHMQCLMGWKQRSNTCPMC 187
>gi|407408633|gb|EKF31995.1| hypothetical protein MOQ_004162 [Trypanosoma cruzi marinkellei]
Length = 340
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH +HL C++ W QRS CP+C
Sbjct: 173 CKHHFHLPCLMNWKQRSNVCPMC 195
>gi|15241188|ref|NP_200445.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|10177832|dbj|BAB11261.1| unnamed protein product [Arabidopsis thaliana]
gi|17380898|gb|AAL36261.1| unknown protein [Arabidopsis thaliana]
gi|20259581|gb|AAM14133.1| unknown protein [Arabidopsis thaliana]
gi|332009368|gb|AED96751.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 396
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPVTF 70
CKH++H++CI+ W + CP+C +F L A + +SER+ ++R + +
Sbjct: 277 CKHKFHVRCIVPWLELHSSCPVC--RFELPSSADDDDETKTDSERVLRTRNVRETSNGNV 334
Query: 71 PEDFDNGPDG 80
E+ N G
Sbjct: 335 VENVGNADRG 344
>gi|357487915|ref|XP_003614245.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355515580|gb|AES97203.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 160
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQ 35
T C H YHL CI EW SK CP+C Q
Sbjct: 100 TRCCHHYHLSCIYEWMSMSKTCPVCRQ 126
>gi|402584008|gb|EJW77950.1| hypothetical protein WUBG_11140 [Wuchereria bancrofti]
Length = 196
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H +HLQCIL+W + K CP+C
Sbjct: 24 CGHVFHLQCILQWFENCKTCPVC 46
>gi|334186091|ref|NP_001190129.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332646302|gb|AEE79823.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 266
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQE 46
+T CKH +H +CI+ W + +CP+C +FV+ +P Q+
Sbjct: 187 LTPCKHMFHEECIVPWLKTKGQCPVC--RFVILKPTKQD 223
>gi|348669190|gb|EGZ09013.1| hypothetical protein PHYSODRAFT_549695 [Phytophthora sojae]
Length = 568
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPIC---WQQFVLKEPA--CQELLAAIESERLSKSRP 61
Q+T+C H +H C L W + ++ CP+C + L +PA + ++A I+ E L
Sbjct: 136 QITACGHTFHPNCFLRWFRLNRSCPLCRGVVDKVALAQPADELEAIMAEIDDESLQLMPA 195
Query: 62 IASAAPVTFPED--FDNGPDGTYF---DYD-DMEARIMQHLAAARYFRRREMQRYPA--- 112
A A V +D N F D+D DME + L F Q A
Sbjct: 196 RAPAGDVAALDDPLLANSDQLMSFLESDFDTDMELAALDDLNTPTSFDLVLKQETSAPMD 255
Query: 113 LDASQVVDSSSAATASLM-LPTNANSPN 139
++ ++VDS A ++ PTN + N
Sbjct: 256 MELDELVDSGDAGKPEVLPPPTNYAAAN 283
>gi|302695281|ref|XP_003037319.1| hypothetical protein SCHCODRAFT_104024 [Schizophyllum commune H4-8]
gi|300111016|gb|EFJ02417.1| hypothetical protein SCHCODRAFT_104024, partial [Schizophyllum
commune H4-8]
Length = 306
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFV 38
CKH +H QCI+ W + S CP+C Q V
Sbjct: 208 CKHAFHEQCIIPWLKSSGTCPVCRYQLV 235
>gi|218193269|gb|EEC75696.1| hypothetical protein OsI_12512 [Oryza sativa Indica Group]
Length = 213
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C H +HL CI EW +RS+ CP+C + + E
Sbjct: 181 CNHNFHLCCIYEWMERSQACPVCSKVMLFHE 211
>gi|198434521|ref|XP_002131882.1| PREDICTED: similar to Ring finger protein 44 [Ciona intestinalis]
Length = 765
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V CKHE+H +C+ W + ++ CPIC
Sbjct: 711 LLRVLPCKHEFHAKCVDRWLRSNRTCPIC 739
>gi|260947710|ref|XP_002618152.1| hypothetical protein CLUG_01611 [Clavispora lusitaniae ATCC
42720]
gi|238848024|gb|EEQ37488.1| hypothetical protein CLUG_01611 [Clavispora lusitaniae ATCC
42720]
Length = 423
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
L +V+ C H YH QC+++WS S CP C + F
Sbjct: 17 LGRVSPCLHTYHEQCLIQWSSHSNSCPTCRKLF 49
>gi|125535037|gb|EAY81585.1| hypothetical protein OsI_36751 [Oryza sativa Indica Group]
Length = 100
Score = 42.4 bits (98), Expect = 0.32, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V C H +HL CI EW +RS+ CP+C
Sbjct: 49 VMQCSHHFHLGCIYEWMERSEACPVC 74
>gi|115454021|ref|NP_001050611.1| Os03g0598700 [Oryza sativa Japonica Group]
gi|108709672|gb|ABF97467.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113549082|dbj|BAF12525.1| Os03g0598700 [Oryza sativa Japonica Group]
gi|215766027|dbj|BAG98255.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625326|gb|EEE59458.1| hypothetical protein OsJ_11649 [Oryza sativa Japonica Group]
Length = 213
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C H +HL CI EW +RS+ CP+C + + E
Sbjct: 181 CNHNFHLCCIYEWMERSQACPVCSKVMLFHE 211
>gi|255087490|ref|XP_002505668.1| predicted protein [Micromonas sp. RCC299]
gi|226520938|gb|ACO66926.1| predicted protein [Micromonas sp. RCC299]
Length = 291
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFV 38
C H +HL C+ +W +RS+ CP+C +
Sbjct: 251 CGHHFHLGCVFDWYERSELCPVCEEPLA 278
>gi|255555637|ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
gi|223541841|gb|EEF43387.1| ring finger protein, putative [Ricinus communis]
Length = 265
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
L Q+ SCKH +H++CI W + CP+C + FV+
Sbjct: 117 LLQIPSCKHVFHIECIHHWLHSNTTCPLC-RSFVI 150
>gi|71404473|ref|XP_804939.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70868150|gb|EAN83088.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 336
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH +HL C++ W QRS CP+C
Sbjct: 173 CKHHFHLPCLMNWKQRSNVCPMC 195
>gi|328870930|gb|EGG19302.1| hypothetical protein DFA_02089 [Dictyostelium fasciculatum]
Length = 806
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
+ C H + +CILEWS++ CP+C ++F L
Sbjct: 334 IDGCSHTFCFECILEWSKQVNRCPLCKEKFNL 365
>gi|198451848|ref|XP_002137377.1| GA26583 [Drosophila pseudoobscura pseudoobscura]
gi|198131671|gb|EDY67935.1| GA26583 [Drosophila pseudoobscura pseudoobscura]
Length = 318
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
CKHE+H QC++ W + S CP+C Q
Sbjct: 85 CKHEFHDQCLIRWLEESYSCPLCRFQL 111
>gi|407841837|gb|EKG00932.1| hypothetical protein TCSYLVIO_008103 [Trypanosoma cruzi]
Length = 336
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH +HL C++ W QRS CP+C
Sbjct: 173 CKHHFHLPCLMNWKQRSNVCPMC 195
>gi|194704664|gb|ACF86416.1| unknown [Zea mays]
gi|413920381|gb|AFW60313.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 102
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
V C H +HL CI EW +RS+ CP+C ++ E
Sbjct: 67 VMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDE 100
>gi|426258009|ref|XP_004022612.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-B-like [Ovis aries]
Length = 640
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ ++ C HEYH QCI +W CPIC
Sbjct: 598 MLRILPCSHEYHYQCIDQWLAEHSTCPIC 626
>gi|328863115|gb|EGG12215.1| hypothetical protein MELLADRAFT_76571 [Melampsora larici-populina
98AG31]
Length = 737
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 3 FCLFQ--------VTSCKHEYHLQCILEWSQRSKECPICWQ 35
CL Q V +C+H +H +CI W +R ECPIC Q
Sbjct: 693 ICLCQFRENESVGVLACEHVFHEECICSWLRRKAECPICKQ 733
>gi|270011222|gb|EFA07670.1| hypothetical protein TcasGA2_TC030677, partial [Tribolium
castaneum]
Length = 332
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC HE+ C+LEWS+ ECP+C Q+F
Sbjct: 35 SCMHEFCYSCLLEWSRIKAECPLCKQEF 62
>gi|70908127|emb|CAJ17120.1| hypothetical protein Tb11.1410 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 318
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH +H+ C++ W QRS CP+C
Sbjct: 167 CKHHFHMPCLMAWKQRSNVCPMC 189
>gi|393244768|gb|EJD52280.1| hypothetical protein AURDEDRAFT_111670 [Auricularia delicata
TFB-10046 SS5]
Length = 520
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQE 46
C HE+H CI+ W + S CP+C Q V +PA +
Sbjct: 273 CVHEFHEDCIVPWLKNSGTCPVCRHQLV-AQPAAHD 307
>gi|324517566|gb|ADY46856.1| Anaphase-promoting complex subunit 11, partial [Ascaris suum]
Length = 406
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSK----ECPICWQQF 37
C + SCKH +H+ CI++W++ +CP+C Q++
Sbjct: 364 CPLAIGSCKHAFHMHCIVKWTETQNTPRPQCPLCRQEW 401
>gi|327263737|ref|XP_003216674.1| PREDICTED: e3 ubiquitin-protein ligase Topors-like [Anolis
carolinensis]
Length = 598
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H + CILEWS R ECP+C Q F
Sbjct: 57 CFHRFCFACILEWSDRKAECPLCKQHF 83
>gi|71754707|ref|XP_828268.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833654|gb|EAN79156.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 318
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH +H+ C++ W QRS CP+C
Sbjct: 167 CKHHFHMPCLMAWKQRSNVCPMC 189
>gi|71396002|ref|XP_802352.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70862161|gb|EAN80906.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 217
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH +HL C++ W QRS CP+C
Sbjct: 173 CKHHFHLPCLMNWKQRSNVCPMC 195
>gi|324512529|gb|ADY45189.1| TRAF-interacting protein [Ascaris suum]
Length = 443
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H +HL+CIL+W Q SK CP C
Sbjct: 25 CGHTFHLECILQWLQTSKTCPEC 47
>gi|145538407|ref|XP_001454909.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422686|emb|CAK87512.1| unnamed protein product [Paramecium tetraurelia]
Length = 436
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 9 TSCKHEYHLQCILEWSQRSK-ECPICWQQFVLK 40
T C H +H++CI W +++K ECPIC QQ LK
Sbjct: 396 TRCHHNFHIKCIKLWLEKAKHECPICRQQLELK 428
>gi|356531180|ref|XP_003534156.1| PREDICTED: uncharacterized protein LOC100818517 [Glycine max]
Length = 357
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C H YH QCI W + CP+C Q+ V++
Sbjct: 327 CDHSYHFQCIKHWLEHKNFCPVCKQEVVVRH 357
>gi|261334084|emb|CBH17078.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 318
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH +H+ C++ W QRS CP+C
Sbjct: 167 CKHHFHMPCLMAWKQRSNVCPMC 189
>gi|307172085|gb|EFN63665.1| E3 ubiquitin-protein ligase Topors [Camponotus floridanus]
Length = 1312
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ C+LEWS+ ECP+C Q F
Sbjct: 580 SCLHQFCFNCLLEWSKIKTECPLCKQTF 607
>gi|347839317|emb|CCD53889.1| similar to RING finger ubiquitin ligase (Tul1) [Botryotinia
fuckeliana]
Length = 895
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ VT C+H +H QC++ W + +CPIC
Sbjct: 861 YMVTPCRHVFHTQCLVGWMKYRLQCPIC 888
>gi|356551257|ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
Length = 214
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L Q+ CKH +HL+CI W Q + CP+C
Sbjct: 121 LVQIPYCKHVFHLECIHHWLQSNSTCPLC 149
>gi|392588687|gb|EIW78019.1| hypothetical protein CONPUDRAFT_75758 [Coniophora puteana
RWD-64-598 SS2]
Length = 904
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQ 35
+ +C HE+ +CIL W+++S++CP+C Q
Sbjct: 140 IPTCSHEFCFECILIWTEQSRKCPLCSQ 167
>gi|452821111|gb|EME28145.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 275
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H +HL CI EW +RS+ CP+C
Sbjct: 242 CGHTFHLSCIYEWLERSRYCPVC 264
>gi|118377550|ref|XP_001021953.1| zinc finger protein [Tetrahymena thermophila]
gi|89303720|gb|EAS01708.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 467
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+ CKH + +CI EWSQ+ +CP+C F+
Sbjct: 33 ILDCKHSFCFECIKEWSQKKLQCPLCKTHFI 63
>gi|145535426|ref|XP_001453446.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421168|emb|CAK86049.1| unnamed protein product [Paramecium tetraurelia]
Length = 410
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 11/60 (18%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPV 68
TSCKH +H QC+ EW Q+ + CP+C + +E A ++ K R ++S++ V
Sbjct: 331 TSCKHIFHEQCLNEWLQKQQTCPLCRENLFEEEGA-----------QIMKVRNLSSSSIV 379
>gi|302834621|ref|XP_002948873.1| hypothetical protein VOLCADRAFT_58539 [Volvox carteri f.
nagariensis]
gi|300266064|gb|EFJ50253.1| hypothetical protein VOLCADRAFT_58539 [Volvox carteri f.
nagariensis]
Length = 81
Score = 41.6 bits (96), Expect = 0.47, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
Q+ CKH YH C+ W +++ CPIC Q+ +P
Sbjct: 15 QLLPCKHSYHATCLAPWLEQNNSCPICRQELPTDDP 50
>gi|15231124|ref|NP_191431.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|7630067|emb|CAB88289.1| putative protein [Arabidopsis thaliana]
gi|332646301|gb|AEE79822.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 238
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQE 46
+T CKH +H +CI+ W + +CP+C +FV+ +P Q+
Sbjct: 159 LTPCKHMFHEECIVPWLKTKGQCPVC--RFVILKPTKQD 195
>gi|242015109|ref|XP_002428216.1| ubiquitin-protein E3 ligase, putative [Pediculus humanus
corporis]
gi|212512777|gb|EEB15478.1| ubiquitin-protein E3 ligase, putative [Pediculus humanus
corporis]
Length = 692
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ QC+L+WS+ ECP+C Q F
Sbjct: 58 SCLHQFCFQCLLQWSKVKAECPLCKQPF 85
>gi|196009474|ref|XP_002114602.1| hypothetical protein TRIADDRAFT_64121 [Trichoplax adhaerens]
gi|190582664|gb|EDV22736.1| hypothetical protein TRIADDRAFT_64121 [Trichoplax adhaerens]
Length = 528
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPIC 33
CL +V CKHE+H CI W + ++ CPIC
Sbjct: 493 CL-RVLMCKHEFHTSCIDRWLKTNRTCPIC 521
>gi|348665585|gb|EGZ05414.1| hypothetical protein PHYSODRAFT_348603 [Phytophthora sojae]
Length = 425
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAA 66
Q++ C H H +CI W Q CP+C ++ V E A + + L+K R +S+
Sbjct: 143 QLSECGHLIHAKCIKRWIQSGTCCPVCREEVVDVEEAFTSPAKGLHA--LTKDRLTSSSE 200
Query: 67 PVTFPED------FDNGPDGTYF-DYDD 87
PED D G + +F D+DD
Sbjct: 201 ATFLPEDEEDNQTEDAGYEWGWFEDFDD 228
>gi|194743234|ref|XP_001954105.1| GF16908 [Drosophila ananassae]
gi|190627142|gb|EDV42666.1| GF16908 [Drosophila ananassae]
Length = 147
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
+++ CKHE+H +CIL W ++ CP+C + + +EL
Sbjct: 83 YKILPCKHEFHEECILLWLKKVNSCPLCRYELETDDEVYEEL 124
>gi|195343262|ref|XP_002038217.1| GM17873 [Drosophila sechellia]
gi|194133067|gb|EDW54635.1| GM17873 [Drosophila sechellia]
Length = 163
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+++ CKHE+H +CIL W +++ CP+C
Sbjct: 83 YRILPCKHEFHEECILLWLKKTNSCPLC 110
>gi|344271622|ref|XP_003407636.1| PREDICTED: hypothetical protein LOC100662830 [Loxodonta africana]
Length = 1066
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 1026 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 1054
>gi|321472164|gb|EFX83135.1| hypothetical protein DAPPUDRAFT_302122 [Daphnia pulex]
Length = 489
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+C HE+ C+LEWS+ ECP+C Q F
Sbjct: 60 TNNCLHEFCFTCLLEWSKVKPECPLCKQPFT 90
>gi|159117641|ref|XP_001709040.1| HRT1-like protein [Giardia lamblia ATCC 50803]
gi|157437155|gb|EDO81366.1| HRT1-like protein [Giardia lamblia ATCC 50803]
Length = 89
Score = 41.6 bits (96), Expect = 0.58, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C HEYH CI +W +K CP+C +V+ E
Sbjct: 58 CGHEYHTHCIQQWVDSNKTCPLCMADWVVSE 88
>gi|429239707|ref|NP_595266.2| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|391358132|sp|O43085.2|DSC1_SCHPO RecName: Full=DSC E3 ubiquitin ligase complex subunit 1; AltName:
Full=Defective for SREBP cleavage protein 1; Flags:
Precursor
gi|347834263|emb|CAA17038.2| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe]
Length = 695
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ +T C H YH QC+L+W + CP+C
Sbjct: 661 YMLTPCHHLYHRQCLLQWMETRSICPVC 688
>gi|367049578|ref|XP_003655168.1| hypothetical protein THITE_2118555 [Thielavia terrestris NRRL 8126]
gi|347002432|gb|AEO68832.1| hypothetical protein THITE_2118555 [Thielavia terrestris NRRL 8126]
Length = 644
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+ Q+ +C H H C+ EWS+++ CPIC Q F
Sbjct: 75 VAQIEACGHMLHDACLREWSEKANSCPICRQIF 107
>gi|296816096|ref|XP_002848385.1| PHD and RING finger domain-containing protein c [Arthroderma otae
CBS 113480]
gi|238841410|gb|EEQ31072.1| PHD and RING finger domain-containing protein c [Arthroderma otae
CBS 113480]
Length = 621
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPVTF 70
C H H C+ W +R+ CPIC Q F + E + AI S + +A P
Sbjct: 54 CGHNLHNDCLKPWVERANSCPICRQNFNVVELLSKVGGPAISSYVVEDRVQVADIDPSMI 113
Query: 71 PEDFDNGPD 79
+D + PD
Sbjct: 114 VDDLLDQPD 122
>gi|294658111|ref|XP_460432.2| DEHA2F01584p [Debaryomyces hansenii CBS767]
gi|202952881|emb|CAG88739.2| DEHA2F01584p [Debaryomyces hansenii CBS767]
Length = 563
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+ +C H YH CIL+WS S CP C + F
Sbjct: 26 IKNCHHYYHEDCILQWSSHSNSCPTCRKLF 55
>gi|449451741|ref|XP_004143619.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis
sativus]
gi|449516467|ref|XP_004165268.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis
sativus]
Length = 323
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH C+ W + +K CP+C
Sbjct: 285 LTVLSCKHSYHSDCVTNWLKINKICPVC 312
>gi|148236424|ref|NP_001084194.1| XRnf12C protein [Xenopus laevis]
gi|33411674|dbj|BAC81443.1| XRnf12C [Xenopus laevis]
Length = 825
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH+ CI W + CPIC + ++
Sbjct: 789 CSHEYHIHCIDRWLSENSTCPICRRAVLV 817
>gi|71034187|ref|XP_766735.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353692|gb|EAN34452.1| hypothetical protein TP01_1214 [Theileria parva]
Length = 321
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH +H+ CI+ W QR CP+C
Sbjct: 259 CKHTFHVDCIIPWLQRRNSCPVC 281
>gi|358055591|dbj|GAA98422.1| hypothetical protein E5Q_05108 [Mixia osmundae IAM 14324]
Length = 1067
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 9/40 (22%)
Query: 3 FCLFQ---------VTSCKHEYHLQCILEWSQRSKECPIC 33
CL Q + SC H +H C+ +W +RS +CP+C
Sbjct: 1026 ICLVQFRPEELAAMLPSCTHVFHCGCVQKWLKRSHQCPVC 1065
>gi|432094725|gb|ELK26205.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 795
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
++ C HEYH+ CI W + CPIC ++ V
Sbjct: 760 LRILPCSHEYHVHCIDRWLSDNSTCPICRREVV 792
>gi|213626227|gb|AAI69999.1| XRnf12C protein [Xenopus laevis]
Length = 751
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH+ CI W + CPIC + ++
Sbjct: 715 CSHEYHIHCIDRWLSENSTCPICRRAVLV 743
>gi|168693457|ref|NP_001108244.1| E3 ubiquitin-protein ligase RNF12-B [Xenopus laevis]
gi|82208071|sp|Q7T037.1|RF12B_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-B; AltName:
Full=RING finger protein 12-B; AltName: Full=XRnf12B
gi|33411672|dbj|BAC81442.1| XRnf12B [Xenopus laevis]
Length = 757
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH+ CI W + CPIC + ++
Sbjct: 721 CSHEYHIHCIDRWLSENSTCPICRRAVLV 749
>gi|225446746|ref|XP_002282713.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform 1 [Vitis
vinifera]
gi|302143495|emb|CBI22056.3| unnamed protein product [Vitis vinifera]
Length = 233
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFVL 39
SCKH+YH CI +W + K CP+C ++ L
Sbjct: 201 SCKHDYHKDCIAKWLEIKKNCPVCQREVEL 230
>gi|169614764|ref|XP_001800798.1| hypothetical protein SNOG_10530 [Phaeosphaeria nodorum SN15]
gi|111060804|gb|EAT81924.1| hypothetical protein SNOG_10530 [Phaeosphaeria nodorum SN15]
Length = 446
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 5 LFQVTSCKHEYHLQCILEW----SQRSKECPICWQQFVLKEP 42
+ Q+T+C+H +HL CIL W + R CP+C ++ +P
Sbjct: 59 VVQITACRHCHHLTCILTWWKSSAARRGSCPLCREELFEPDP 100
>gi|302683312|ref|XP_003031337.1| hypothetical protein SCHCODRAFT_109777 [Schizophyllum commune
H4-8]
gi|300105029|gb|EFI96434.1| hypothetical protein SCHCODRAFT_109777, partial [Schizophyllum
commune H4-8]
Length = 700
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 22/28 (78%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQ 35
+ +C HE+ +C+L W+++S++CP+C Q
Sbjct: 53 IPTCSHEFCFECLLIWTEQSRKCPLCNQ 80
>gi|145509859|ref|XP_001440868.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408096|emb|CAK73471.1| unnamed protein product [Paramecium tetraurelia]
Length = 622
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH++H CI W Q K CPIC
Sbjct: 591 CKHQFHFDCIKRWLQTQKNCPIC 613
>gi|195153180|ref|XP_002017507.1| GL21484 [Drosophila persimilis]
gi|194112564|gb|EDW34607.1| GL21484 [Drosophila persimilis]
Length = 636
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 555 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 583
>gi|388854592|emb|CCF51749.1| related to anaphase promoting complex subunit 11 [Ustilago
hordei]
Length = 100
Score = 41.2 bits (95), Expect = 0.66, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPIC---WQQ 36
C C HE+HL CI++W Q + CP C W+Q
Sbjct: 46 CPLLFGKCSHEFHLHCIMKWLQDNDGCPSCRRPWEQ 81
>gi|345492507|ref|XP_001600719.2| PREDICTED: hypothetical protein LOC100116176 [Nasonia vitripennis]
Length = 809
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF--VLKEPACQELLAAIESERLSKSRPIASAAP 67
SC H++ C+L+WS+ ECP+C Q F ++ QE +R S+ +A+
Sbjct: 57 SCLHQFCFSCLLQWSKIKTECPLCKQTFKSIIHNVRSQEDYDQYHVQRTSQ---VAATLD 113
Query: 68 VT 69
VT
Sbjct: 114 VT 115
>gi|359485326|ref|XP_003633258.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform 2 [Vitis
vinifera]
Length = 209
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFVL 39
SCKH+YH CI +W + K CP+C ++ L
Sbjct: 177 SCKHDYHKDCIAKWLEIKKNCPVCQREVEL 206
>gi|118386801|ref|XP_001026518.1| hypothetical protein TTHERM_00328540 [Tetrahymena thermophila]
gi|89308285|gb|EAS06273.1| hypothetical protein TTHERM_00328540 [Tetrahymena thermophila
SB210]
Length = 314
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+T CKH +H +C++ W ++++ CP+C Q F
Sbjct: 130 LTICKHAFHSECLMAWIRKNENCPLCRQSF 159
>gi|145548393|ref|XP_001459877.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427704|emb|CAK92480.1| unnamed protein product [Paramecium tetraurelia]
Length = 491
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPIC 33
C VT C+H YH QC+ +W + K CP+C
Sbjct: 450 CEIMVTPCQHMYHQQCLRDWMEVQKRCPVC 479
>gi|148223081|ref|NP_001082725.1| E3 ubiquitin-protein ligase RNF12-A [Xenopus laevis]
gi|82198038|sp|Q641J8.1|RF12A_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-A; AltName:
Full=RING finger protein 12-A; AltName: Full=XRnf12
gi|51950095|gb|AAH82339.1| XRnf12 protein [Xenopus laevis]
Length = 622
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH+ CI W + CPIC + ++
Sbjct: 586 CSHEYHIHCIDRWLSENSTCPICRRAVLV 614
>gi|449440012|ref|XP_004137779.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449483396|ref|XP_004156578.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 316
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 15/27 (55%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
CKH YHL CIL W CP+C Q
Sbjct: 149 CKHIYHLDCILPWLSIRNSCPVCRHQL 175
>gi|358057686|dbj|GAA96451.1| hypothetical protein E5Q_03118 [Mixia osmundae IAM 14324]
Length = 505
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQ 35
C H YH QC+++W R+ CP+C Q
Sbjct: 452 CSHSYHAQCLIQWLYRASTCPVCHQ 476
>gi|356522815|ref|XP_003530039.1| PREDICTED: uncharacterized protein LOC100807785 [Glycine max]
Length = 354
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C H YH QCI +W CP+C Q+ V++
Sbjct: 324 CDHSYHFQCIKQWLVHKNFCPVCKQEVVVRH 354
>gi|302813314|ref|XP_002988343.1| hypothetical protein SELMODRAFT_447294 [Selaginella moellendorffii]
gi|300144075|gb|EFJ10762.1| hypothetical protein SELMODRAFT_447294 [Selaginella moellendorffii]
Length = 703
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+C H YH+ CI +W R CPIC
Sbjct: 655 LGTINCGHNYHMDCIRQWLVRKNSCPIC 682
>gi|260827090|ref|XP_002608498.1| hypothetical protein BRAFLDRAFT_126633 [Branchiostoma floridae]
gi|229293849|gb|EEN64508.1| hypothetical protein BRAFLDRAFT_126633 [Branchiostoma floridae]
Length = 1727
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 2 QFCLFQV---TSCKHEYHLQCILEWSQRSKECPICWQQF 37
+F L +V +C+H + + CILEWS+ + CP+ +QF
Sbjct: 132 EFELQEVGTPVNCQHNFCIDCILEWSKNTNSCPVDRKQF 170
>gi|33411670|dbj|BAC81441.1| XRnf12 [Xenopus laevis]
Length = 616
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH+ CI W + CPIC + ++
Sbjct: 580 CSHEYHIHCIDRWLSENSTCPICRRAVLV 608
>gi|15239131|ref|NP_199108.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|18087616|gb|AAL58938.1|AF462851_1 AT5g42940/MBD2_14 [Arabidopsis thaliana]
gi|9758583|dbj|BAB09196.1| unnamed protein product [Arabidopsis thaliana]
gi|28416527|gb|AAO42794.1| At5g42940/MBD2_14 [Arabidopsis thaliana]
gi|227206274|dbj|BAH57192.1| AT5G42940 [Arabidopsis thaliana]
gi|332007507|gb|AED94890.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 691
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HE+H QCI EW ++ CPIC
Sbjct: 655 CGHEFHSQCIKEWLKQKNLCPIC 677
>gi|348690933|gb|EGZ30747.1| hypothetical protein PHYSODRAFT_295425 [Phytophthora sojae]
Length = 548
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPV 68
CKH +H+ CI EW +R+ CP+C L I E LS R A PV
Sbjct: 497 CKHIFHVACIDEWLKRNTSCPMCKSNVDLDA-------VDITVENLSTGRGGAVVTPV 547
>gi|302834595|ref|XP_002948860.1| hypothetical protein VOLCADRAFT_89157 [Volvox carteri f.
nagariensis]
gi|300266051|gb|EFJ50240.1| hypothetical protein VOLCADRAFT_89157 [Volvox carteri f.
nagariensis]
Length = 928
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPA 43
V C H +H C+LEW RS CP+C +EPA
Sbjct: 888 VLRCGHSFHEWCVLEWLLRSPRCPMC------REPA 917
>gi|297493301|ref|XP_002700289.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Bos taurus]
gi|296470587|tpg|DAA12702.1| TPA: ring finger protein, LIM domain interacting-like [Bos taurus]
Length = 129
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ ++ C HEYH QCI +W + CPIC
Sbjct: 87 MLRILPCSHEYHYQCIDQWLEEHPNCPIC 115
>gi|393910278|gb|EFO22820.2| hypothetical protein LOAG_05668 [Loa loa]
Length = 400
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPVTF 70
C H +HL CIL+W + K CP+C ++ ++ Q E++ + S S P+
Sbjct: 24 CGHVFHLHCILQWFENCKTCPVCRKKATTRDLIRQLFFQMDENKSFNSS----STNPLEM 79
Query: 71 PEDFDNGPDG 80
N D
Sbjct: 80 HNQLQNALDN 89
>gi|71394121|ref|XP_802254.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70860458|gb|EAN80808.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 220
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH +HL C++ W QRS CP+C
Sbjct: 57 CKHHFHLPCLMNWKQRSNVCPMC 79
>gi|378725589|gb|EHY52048.1| anaphase-promoting complex component APC11 [Exophiala
dermatitidis NIH/UT8656]
Length = 94
Score = 40.8 bits (94), Expect = 0.78, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKE---CPICWQQFVLKEPACQE 46
C V C H +H+ C+L W Q+ CP+C Q+F K+ E
Sbjct: 45 CTLLVGKCGHSFHMHCLLTWIQQESSKGLCPMCRQKFEWKQAGDTE 90
>gi|45382265|ref|NP_990159.1| E3 ubiquitin-protein ligase RLIM [Gallus gallus]
gi|4959046|gb|AAD34210.1|AF069993_1 LIM domain interacting RING finger protein [Gallus gallus]
Length = 593
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 557 CSHEYHVHCIARWLSENSTCPIC 579
>gi|390179083|ref|XP_003736797.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859705|gb|EIM52870.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1224
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 1141 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 1169
>gi|226490244|emb|CAX69364.1| Protein TRC8 homolog [Schistosoma japonicum]
Length = 816
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPIC 33
++T C H YH +C+++W +R CPIC
Sbjct: 758 KITRCGHLYHSECLIQWMKRQLSCPIC 784
>gi|297791661|ref|XP_002863715.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297309550|gb|EFH39974.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 682
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HE+H QCI EW ++ CPIC
Sbjct: 646 CGHEFHSQCIKEWLKQKNLCPIC 668
>gi|162606500|ref|XP_001713280.1| hypothetical protein GTHECHR2167 [Guillardia theta]
gi|12580746|emb|CAC27064.1| hypothetical protein [Guillardia theta]
Length = 477
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPIC 33
++ SCKH YH++C+ W R CPIC
Sbjct: 323 KILSCKHIYHIKCLQTWLIRQYCCPIC 349
>gi|340054983|emb|CCC49291.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 207
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V C H +HLQC+ +W QRS CP+C
Sbjct: 83 VVICGHGFHLQCLEDWRQRSPVCPVC 108
>gi|432847160|ref|XP_004065960.1| PREDICTED: uncharacterized protein LOC101170493 [Oryzias latipes]
Length = 884
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +CILEWS+ ECP+C Q F
Sbjct: 49 CLHKFCFRCILEWSKNKAECPLCKQPF 75
>gi|393903772|gb|EFO19573.2| hypothetical protein LOAG_08919 [Loa loa]
Length = 508
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQ 35
L ++ C H +HL+CI +W + ++ CPIC Q
Sbjct: 402 LVRMLPCAHHFHLKCIDKWLRGNRTCPICRQ 432
>gi|413934716|gb|AFW69267.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 585
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+H+YH++CI EW ++ CPIC
Sbjct: 549 CEHQYHVRCIHEWLKQKNWCPIC 571
>gi|389630108|ref|XP_003712707.1| hypothetical protein MGG_12926 [Magnaporthe oryzae 70-15]
gi|351645039|gb|EHA52900.1| hypothetical protein MGG_12926 [Magnaporthe oryzae 70-15]
gi|440469929|gb|ELQ39020.1| hypothetical protein OOU_Y34scaffold00516g55 [Magnaporthe oryzae
Y34]
gi|440483018|gb|ELQ63461.1| hypothetical protein OOW_P131scaffold00982g59 [Magnaporthe oryzae
P131]
Length = 636
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+ +C H H C+LEW+ ++ CPIC Q F
Sbjct: 77 INACGHALHNCCLLEWAGKANSCPICRQTF 106
>gi|302829955|ref|XP_002946544.1| hypothetical protein VOLCADRAFT_86603 [Volvox carteri f.
nagariensis]
gi|300268290|gb|EFJ52471.1| hypothetical protein VOLCADRAFT_86603 [Volvox carteri f.
nagariensis]
Length = 141
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC+H YH C+ +W Q+SK CPIC ++
Sbjct: 111 SCRHCYHSDCVRQWLQQSKACPICGKEV 138
>gi|145490012|ref|XP_001431007.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398109|emb|CAK63609.1| unnamed protein product [Paramecium tetraurelia]
Length = 461
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
T C+H +H QC+++W+ + CP+C Q + KE
Sbjct: 334 TPCRHVFHEQCLVDWTTKQANCPVCRQGLLEKE 366
>gi|198454408|ref|XP_002137865.1| GA26288, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132780|gb|EDY68423.1| GA26288, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 890
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 807 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 835
>gi|312084983|ref|XP_003144497.1| hypothetical protein LOAG_08919 [Loa loa]
Length = 514
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQ 35
L ++ C H +HL+CI +W + ++ CPIC Q
Sbjct: 408 LVRMLPCAHHFHLKCIDKWLRGNRTCPICRQ 438
>gi|297823601|ref|XP_002879683.1| hypothetical protein ARALYDRAFT_345494 [Arabidopsis lyrata subsp.
lyrata]
gi|297325522|gb|EFH55942.1| hypothetical protein ARALYDRAFT_345494 [Arabidopsis lyrata subsp.
lyrata]
Length = 312
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
Q+ CKH +H+ CI EW + CPIC +K+
Sbjct: 160 QLIECKHAFHVSCIEEWLKDHPNCPICRTDVSVKQ 194
>gi|237832153|ref|XP_002365374.1| hypothetical protein TGME49_062740 [Toxoplasma gondii ME49]
gi|211963038|gb|EEA98233.1| hypothetical protein TGME49_062740 [Toxoplasma gondii ME49]
Length = 630
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
L ++ C H +HL CI WS+ CP+C F
Sbjct: 262 LGKIECCSHNFHLHCIEGWSRHETTCPLCKAVFT 295
>gi|116791710|gb|ABK26080.1| unknown [Picea sitchensis]
Length = 282
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH+YH CI +W Q +K CP+C
Sbjct: 250 CKHQYHSDCIKKWLQINKVCPVC 272
>gi|157129771|ref|XP_001661757.1| hypothetical protein AaeL_AAEL011580 [Aedes aegypti]
gi|108872095|gb|EAT36320.1| AAEL011580-PA [Aedes aegypti]
Length = 147
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+F V CKH++H CI+ W +++ CP+C + +
Sbjct: 82 MFLVLPCKHDFHKSCIMPWLEKTNSCPLCRHELL 115
>gi|357604467|gb|EHJ64200.1| hypothetical protein KGM_14148 [Danaus plexippus]
Length = 873
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 6/37 (16%)
Query: 3 FCLFQVTS------CKHEYHLQCILEWSQRSKECPIC 33
C+F++ S C H +H++C+ +W +K CPIC
Sbjct: 823 LCVFEIDSDCRRLPCMHLFHMECVDQWLSTNKHCPIC 859
>gi|327285025|ref|XP_003227235.1| PREDICTED: e3 ubiquitin-protein ligase Topors-like [Anolis
carolinensis]
Length = 1005
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+ C H++ +CI EWS+ ECP+C Q F ++ +++S+ K + A
Sbjct: 75 LDQCWHKFCFRCIQEWSKNKAECPLCKQPF-------HSVVHSMKSQNDYKVYTVKPAET 127
Query: 68 VTFPEDFDNGPDGTYF 83
TF PDG F
Sbjct: 128 DTF-----GNPDGRRF 138
>gi|356513018|ref|XP_003525211.1| PREDICTED: uncharacterized protein LOC100788837 [Glycine max]
Length = 371
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQ 36
+C+H YH QCI +W + CP+C QQ
Sbjct: 340 NCEHSYHFQCIKQWVAQKNFCPVCKQQ 366
>gi|170111246|ref|XP_001886827.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638185|gb|EDR02464.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 606
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 12/57 (21%)
Query: 3 FCLFQVTS------CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIES 53
CL V C HE+ +C+L W+++S+ CP+C Q P + L+ +I S
Sbjct: 54 ICLHSVVDRTVVPKCSHEFCFECLLVWTEQSRRCPLCSQ------PIGEYLIHSIRS 104
>gi|343473865|emb|CCD14357.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 289
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
++ +C+H +H CI W +SK CP+C Q+ V
Sbjct: 257 VELKACRHIFHRGCIDTWLSKSKNCPVCKQEVV 289
>gi|291229977|ref|XP_002734949.1| PREDICTED: ring finger protein 38-like [Saccoglossus kowalevskii]
Length = 561
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V +C HE+H +C+ +W + ++ CPIC
Sbjct: 520 LLRVLTCNHEFHTKCVDKWLKTNRTCPIC 548
>gi|195395466|ref|XP_002056357.1| GJ10273 [Drosophila virilis]
gi|194143066|gb|EDW59469.1| GJ10273 [Drosophila virilis]
Length = 1174
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 1084 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 1112
>gi|225439928|ref|XP_002280200.1| PREDICTED: uncharacterized protein LOC100263731 [Vitis vinifera]
gi|297741578|emb|CBI32710.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAI 51
+++C+H+YH+ CI +W CPIC K PA + + I
Sbjct: 509 LSACRHDYHVDCIKKWLLMKNSCPIC------KAPALPDHMKGI 546
>gi|238496295|ref|XP_002379383.1| PA and RING finger domain protein [Aspergillus flavus NRRL3357]
gi|220694263|gb|EED50607.1| PA and RING finger domain protein [Aspergillus flavus NRRL3357]
Length = 875
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 11 CKHEYHLQCILEW-SQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPVT 69
C HE+H +CI W + R + CPIC +++ ++ + +++R A + T
Sbjct: 748 CGHEFHAECITPWLTTRRRTCPIC----------KGDVVRSMSQNKAAETREPAESIDHT 797
Query: 70 FPEDFDNGPD 79
+P + D+ P+
Sbjct: 798 YPHELDSHPN 807
>gi|22795247|gb|AAN08219.1| hypothetical protein [Oryza sativa Japonica Group]
gi|28875970|gb|AAO59979.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 233
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H +HL CI EW +RS+ CP+C
Sbjct: 181 CNHNFHLCCIYEWMERSQACPVC 203
>gi|348534437|ref|XP_003454708.1| PREDICTED: hypothetical protein LOC100699507 [Oreochromis
niloticus]
Length = 821
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
CKH + CI EWS + ECP+C Q F
Sbjct: 135 CKHRFCFPCIQEWSHKKPECPLCKQPF 161
>gi|296193541|ref|XP_002806653.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44 [Callithrix
jacchus]
Length = 562
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 522 LLRVLXCNHEFHTKCVDKWLKANRTCPIC 550
>gi|198457480|ref|XP_001360685.2| GA13494 [Drosophila pseudoobscura pseudoobscura]
gi|198135996|gb|EAL25260.2| GA13494 [Drosophila pseudoobscura pseudoobscura]
Length = 1102
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ +C+ EWS+ ECP+C Q F
Sbjct: 114 SCMHQFCFKCLCEWSKVKAECPLCKQPF 141
>gi|195384441|ref|XP_002050926.1| GJ19929 [Drosophila virilis]
gi|194145723|gb|EDW62119.1| GJ19929 [Drosophila virilis]
Length = 434
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
VT C H +H C+++W +RSK CP C
Sbjct: 21 VTICGHMFHHNCLMQWLERSKTCPQC 46
>gi|317147263|ref|XP_001822003.2| PA and RING finger domain protein [Aspergillus oryzae RIB40]
Length = 875
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 11 CKHEYHLQCILEW-SQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPVT 69
C HE+H +CI W + R + CPIC +++ ++ + +++R A + T
Sbjct: 748 CGHEFHAECITPWLTTRRRTCPIC----------KGDVVRSMSQNKAAETREPAESIDHT 797
Query: 70 FPEDFDNGPD 79
+P + D+ P+
Sbjct: 798 YPHELDSHPN 807
>gi|224075136|ref|XP_002304565.1| predicted protein [Populus trichocarpa]
gi|222841997|gb|EEE79544.1| predicted protein [Populus trichocarpa]
Length = 247
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L Q+ SCKH +H+ CI W + CP+C
Sbjct: 114 LLQIPSCKHVFHIDCIHHWLHSNSTCPLC 142
>gi|171680865|ref|XP_001905377.1| hypothetical protein [Podospora anserina S mat+]
gi|170940060|emb|CAP65287.1| unnamed protein product [Podospora anserina S mat+]
Length = 101
Score = 40.8 bits (94), Expect = 0.97, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSK---ECPICWQQFVLKEPACQELLAAIES 53
C+ C H +H+ CILEW ++ +CP+C Q+F + Q + A ++
Sbjct: 45 CILLSGKCGHNFHMHCILEWMKQDSAKGQCPMCRQRFEWADQTNQTMRDAAQA 97
>gi|147858806|emb|CAN80846.1| hypothetical protein VITISV_014889 [Vitis vinifera]
Length = 532
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAI 51
+++C+H+YH+ CI +W CPIC K PA + + I
Sbjct: 495 LSACRHDYHVDCIKKWLLMKNSCPIC------KAPALPDHMKGI 532
>gi|62859463|ref|NP_001016091.1| E3 ubiquitin-protein ligase RNF12 [Xenopus (Silurana) tropicalis]
gi|123884087|sp|Q07G42.1|RNF12_XENTR RecName: Full=E3 ubiquitin-protein ligase RNF12; AltName: Full=RING
finger protein 12
gi|115530795|emb|CAL49424.1| ring finger protein 12 [Xenopus (Silurana) tropicalis]
Length = 639
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH+ CI W + CPIC + ++
Sbjct: 603 CSHEYHVHCIDRWLSENSTCPICRRAVLV 631
>gi|356524644|ref|XP_003530938.1| PREDICTED: uncharacterized protein LOC100819907 [Glycine max]
Length = 377
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQ 36
+C+H YH QCI +W+ + CP+C QQ
Sbjct: 346 NCEHIYHFQCIKQWAAQKNFCPVCKQQ 372
>gi|213624561|gb|AAI71271.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
gi|213627806|gb|AAI71269.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
Length = 639
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH+ CI W + CPIC + ++
Sbjct: 603 CSHEYHVHCIDRWLSENSTCPICRRAVLV 631
>gi|194881250|ref|XP_001974761.1| GG21938 [Drosophila erecta]
gi|190657948|gb|EDV55161.1| GG21938 [Drosophila erecta]
Length = 1059
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ +C+ EWS+ ECP+C Q F
Sbjct: 117 SCMHQFCFKCLCEWSKIKPECPLCKQPF 144
>gi|189527584|ref|XP_686027.3| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like isoform 1
[Danio rerio]
Length = 632
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH+ CI W + CPIC + ++
Sbjct: 596 CSHEYHVHCIDRWLSENSTCPICRRAVLI 624
>gi|398342835|ref|ZP_10527538.1| methyl-accepting chemotaxis protein [Leptospira inadai serovar Lyme
str. 10]
Length = 570
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 122 SSAATASLMLPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPS-SDPGTNRDGPFKSRVF 180
S A A +++ + A S G + I T+ I+ D ++P D N+D +
Sbjct: 196 SIATIAYILISSIAFSIRLVRGLT---IVTTSIKDADFSRPIDVKDDDRNKDELHLLLIA 252
Query: 181 FRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISKGTRSLKERLLSRNTSVKEL 240
FR+ R S +FSFSES+ + E +SK + L E S + SV+E+
Sbjct: 253 FREFQK--KVRTMLSTIFSFSESILTA--------SEELSKASNYLSENAQSESASVEEI 302
Query: 241 SKEVQREMSAGIAGVAK 257
S V+ E+SAG+ V K
Sbjct: 303 SASVE-EISAGMEQVTK 318
>gi|224131348|ref|XP_002321062.1| predicted protein [Populus trichocarpa]
gi|222861835|gb|EEE99377.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
VT C H +H +CI+ W++ + +CP+C +FVL
Sbjct: 193 VTPCNHMFHEECIVPWAKSNGKCPVC--RFVL 222
>gi|241695303|ref|XP_002413046.1| conserved hypothetical protein [Ixodes scapularis]
gi|215506860|gb|EEC16354.1| conserved hypothetical protein [Ixodes scapularis]
Length = 398
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H + C+LEWS+ ECP+C Q+F
Sbjct: 34 SCFHTFCFSCLLEWSKVKAECPLCKQRF 61
>gi|195335760|ref|XP_002034531.1| GM21927 [Drosophila sechellia]
gi|194126501|gb|EDW48544.1| GM21927 [Drosophila sechellia]
Length = 1048
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ +C+ EWS+ ECP+C Q F
Sbjct: 117 SCMHQFCFKCLCEWSKIKPECPLCKQPF 144
>gi|194757856|ref|XP_001961178.1| GF11128 [Drosophila ananassae]
gi|190622476|gb|EDV38000.1| GF11128 [Drosophila ananassae]
Length = 1076
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ +C+ EWS+ ECP+C Q F
Sbjct: 103 SCMHQFCFKCLCEWSKIKPECPLCKQPF 130
>gi|110762874|ref|XP_394020.3| PREDICTED: hypothetical protein LOC410541 [Apis mellifera]
Length = 767
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ C+L+WS+ ECP+C Q F
Sbjct: 58 SCLHQFCFTCLLQWSKIKTECPLCKQTF 85
>gi|350424969|ref|XP_003493971.1| PREDICTED: hypothetical protein LOC100742727 [Bombus impatiens]
Length = 769
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ C+L+WS+ ECP+C Q F
Sbjct: 58 SCLHQFCFTCLLQWSKIKTECPLCKQTF 85
>gi|251829631|gb|ACT21194.1| zinc finger protein [Carica papaya]
Length = 340
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH QCIL W + CP+C
Sbjct: 217 CKHIYHSQCILPWLELHNSCPVC 239
>gi|20130141|ref|NP_611388.1| topoisomerase I-interacting protein, isoform A [Drosophila
melanogaster]
gi|442624184|ref|NP_001261083.1| topoisomerase I-interacting protein, isoform B [Drosophila
melanogaster]
gi|74867784|sp|Q9V8P9.1|TOPRS_DROME RecName: Full=E3 ubiquitin-protein ligase Topors; AltName:
Full=SUMO1-protein E3 ligase Topors; AltName:
Full=Topoisomerase I-binding RING finger protein;
AltName: Full=Topoisomerase I-binding
arginine/serine-rich protein; AltName: Full=dTopors
gi|7302531|gb|AAF57614.1| topoisomerase I-interacting protein, isoform A [Drosophila
melanogaster]
gi|21483446|gb|AAM52698.1| LD43109p [Drosophila melanogaster]
gi|440214516|gb|AGB93615.1| topoisomerase I-interacting protein, isoform B [Drosophila
melanogaster]
Length = 1038
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ +C+ EWS+ ECP+C Q F
Sbjct: 117 SCMHQFCFKCLCEWSKIKPECPLCKQPF 144
>gi|168050235|ref|XP_001777565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671050|gb|EDQ57608.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIAS 64
L + CKH YH CIL W + CP+C + + + ++ S S P AS
Sbjct: 378 LVRQMPCKHMYHADCILPWLAQHNSCPVCRYEMPTDDHS--------YNQSHSNSIPAAS 429
Query: 65 AAPVTFPE 72
A T PE
Sbjct: 430 TAASTNPE 437
>gi|158296161|ref|XP_316640.4| AGAP006611-PA [Anopheles gambiae str. PEST]
gi|157016381|gb|EAA11334.4| AGAP006611-PA [Anopheles gambiae str. PEST]
Length = 450
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
+T C H +H C+L+W +RSK CP C
Sbjct: 20 ITPCGHMFHHLCLLQWLERSKTCPQC 45
>gi|357511785|ref|XP_003626181.1| PHD and RING finger domain-containing protein [Medicago truncatula]
gi|355501196|gb|AES82399.1| PHD and RING finger domain-containing protein [Medicago truncatula]
Length = 904
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQF-VLKEPA 43
+ SC H + CI+EWS+ CP+C Q+F + +PA
Sbjct: 442 LNSCTHYFCFACIMEWSKVESRCPLCKQRFQTISKPA 478
>gi|344232776|gb|EGV64649.1| hypothetical protein CANTEDRAFT_129872 [Candida tenuis ATCC
10573]
Length = 489
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
L V C+H YH CI++WS S CP C F
Sbjct: 23 LGVVRDCRHYYHDTCIVQWSNNSNSCPTCRNLF 55
>gi|302819554|ref|XP_002991447.1| hypothetical protein SELMODRAFT_448412 [Selaginella moellendorffii]
gi|300140840|gb|EFJ07559.1| hypothetical protein SELMODRAFT_448412 [Selaginella moellendorffii]
Length = 510
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+C H YH+ CI +W R CPIC
Sbjct: 462 LGTINCGHNYHMDCIRQWLVRKNSCPIC 489
>gi|449266689|gb|EMC77711.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 544
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQF 37
V C+H++ L CIL W++R+ CP+C QQ
Sbjct: 234 VQPCQHQFCLGCILRWAKRTSNCPLCRQQM 263
>gi|357500259|ref|XP_003620418.1| RING finger protein [Medicago truncatula]
gi|355495433|gb|AES76636.1| RING finger protein [Medicago truncatula]
Length = 374
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLK 40
C+H YH QCI +W CP+C Q+ V++
Sbjct: 344 CEHSYHFQCIKQWLVLKNFCPVCKQEVVVR 373
>gi|195487260|ref|XP_002091834.1| GE12014 [Drosophila yakuba]
gi|194177935|gb|EDW91546.1| GE12014 [Drosophila yakuba]
Length = 1068
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ +C+ EWS+ ECP+C Q F
Sbjct: 118 SCMHQFCFRCLCEWSKIKPECPLCKQPF 145
>gi|413919421|gb|AFW59353.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413919422|gb|AFW59354.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 376
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+CKH YHL CI W ++ CPIC
Sbjct: 345 ACKHYYHLSCIEHWLRQKNRCPIC 368
>gi|219116190|ref|XP_002178890.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409657|gb|EEC49588.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 376
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
T+C+H +H++C +EW Q+ CP C
Sbjct: 307 TACQHVFHMECAMEWLQKHSHCPYC 331
>gi|226509628|ref|NP_001151400.1| zinc finger, C3HC4 type family protein [Zea mays]
gi|195646486|gb|ACG42711.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 376
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+CKH YHL CI W ++ CPIC
Sbjct: 345 ACKHYYHLSCIEHWLRQKNRCPIC 368
>gi|449266683|gb|EMC77705.1| E3 ubiquitin-protein ligase Topor, partial [Columba livia]
Length = 90
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQF 37
V C+H++ L CIL W++R+ CP+C QQ
Sbjct: 22 VQPCQHQFCLGCILRWAKRTSNCPLCRQQM 51
>gi|118365285|ref|XP_001015863.1| hypothetical protein TTHERM_00266280 [Tetrahymena thermophila]
gi|89297630|gb|EAR95618.1| hypothetical protein TTHERM_00266280 [Tetrahymena thermophila
SB210]
Length = 1000
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
++T C H +H QC+ EW + ++ CP+C Q F
Sbjct: 589 LRITICSHYFHSQCLEEWLESNENCPLCRQSF 620
>gi|410914034|ref|XP_003970493.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Takifugu
rubripes]
Length = 661
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH+ CI W + CPIC + ++
Sbjct: 625 CSHEYHVHCIDRWLSENSTCPICRRAVLV 653
>gi|195120702|ref|XP_002004860.1| GI19365 [Drosophila mojavensis]
gi|193909928|gb|EDW08795.1| GI19365 [Drosophila mojavensis]
Length = 1101
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ +C+ EWS+ ECP+C Q F
Sbjct: 118 SCMHQFCFKCLCEWSKIKAECPLCKQPF 145
>gi|118358174|ref|XP_001012335.1| hypothetical protein TTHERM_00106910 [Tetrahymena thermophila]
gi|89294102|gb|EAR92090.1| hypothetical protein TTHERM_00106910 [Tetrahymena thermophila
SB210]
Length = 597
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
++ V C+HE+ + CIL+WS+ + CP+C +F
Sbjct: 461 IYGVVQCQHEFCIDCILQWSEVTNLCPMCRAEF 493
>gi|303281384|ref|XP_003059984.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458639|gb|EEH55936.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 62
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQ 36
C+H +HL C+ EW +RS+ CP+C ++
Sbjct: 23 CEHHFHLGCVFEWFERSELCPVCEEK 48
>gi|296818505|ref|XP_002849589.1| anaphase promoting complex subunit 11 [Arthroderma otae CBS
113480]
gi|238840042|gb|EEQ29704.1| anaphase promoting complex subunit 11 [Arthroderma otae CBS
113480]
Length = 87
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKE---CPICWQQFVLKE 41
C + C H +H+ C+L W Q+ CP+C Q+F K+
Sbjct: 45 CTLLIGKCGHSFHMHCLLTWIQQDSSKGLCPMCRQKFEWKQ 85
>gi|195150691|ref|XP_002016284.1| GL11500 [Drosophila persimilis]
gi|194110131|gb|EDW32174.1| GL11500 [Drosophila persimilis]
Length = 868
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ +C+ EWS+ ECP+C Q F
Sbjct: 114 SCMHQFCFKCLCEWSKVKAECPLCKQPF 141
>gi|357462645|ref|XP_003601604.1| RING finger protein [Medicago truncatula]
gi|355490652|gb|AES71855.1| RING finger protein [Medicago truncatula]
Length = 352
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 4 CL--FQVTS------CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
CL F+V S CKH +H CIL W + CP+C Q + EP
Sbjct: 236 CLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRSQLRVDEP 282
>gi|344248945|gb|EGW05049.1| E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
Length = 767
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+V +C HEYH +CI W + CP+C +Q +
Sbjct: 726 IRVLTCCHEYHDECIDPWLSENSTCPVCRRQII 758
>gi|145534736|ref|XP_001453112.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420812|emb|CAK85715.1| unnamed protein product [Paramecium tetraurelia]
Length = 458
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAA 50
T CKH +H QC+ +W+ + CP+C Q L+E Q+LL
Sbjct: 335 TPCKHNFHDQCLSDWTIKQANCPVCRQS--LQEQDIQKLLLC 374
>gi|195584770|ref|XP_002082177.1| GD11423 [Drosophila simulans]
gi|194194186|gb|EDX07762.1| GD11423 [Drosophila simulans]
Length = 868
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ +C+ EWS+ ECP+C Q F
Sbjct: 117 SCMHQFCFKCLCEWSKIKPECPLCKQPF 144
>gi|28573149|ref|NP_731367.2| murashka, isoform C [Drosophila melanogaster]
gi|28381204|gb|AAF54394.4| murashka, isoform C [Drosophila melanogaster]
gi|317008637|gb|ADU79246.1| GH10160p [Drosophila melanogaster]
Length = 1173
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 1089 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 1117
>gi|348667225|gb|EGZ07051.1| hypothetical protein PHYSODRAFT_565861 [Phytophthora sojae]
Length = 821
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICW 34
C H++H CI W + K CP CW
Sbjct: 78 CHHQFHAACIERWLSKDKVCPTCW 101
>gi|255561042|ref|XP_002521533.1| ring finger protein, putative [Ricinus communis]
gi|223539211|gb|EEF40804.1| ring finger protein, putative [Ricinus communis]
Length = 316
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ SCKH YH +CI W + +K CP+C
Sbjct: 279 LTLLSCKHSYHSECINNWLKINKVCPVC 306
>gi|195029995|ref|XP_001987857.1| GH22143 [Drosophila grimshawi]
gi|193903857|gb|EDW02724.1| GH22143 [Drosophila grimshawi]
Length = 433
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
VT C H +H C+++W +RSK CP C
Sbjct: 21 VTICGHMFHHTCLMQWLERSKTCPQC 46
>gi|380021895|ref|XP_003694792.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Apis florea]
Length = 567
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ C+L+WS+ ECP+C Q F
Sbjct: 58 SCLHQFCFTCLLQWSKIKTECPLCKQTF 85
>gi|431901142|gb|ELK08267.1| E3 ubiquitin-protein ligase RLIM [Pteropus alecto]
Length = 607
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 571 CSHEYHVHCIDRWLSENSTCPIC 593
>gi|403351718|gb|EJY75356.1| Zinc finger protein [Oxytricha trifallax]
Length = 507
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLK 40
+ CKHEYH C+ +W + K CP+C ++ +K
Sbjct: 475 LNGCKHEYHEGCLGKWLEGEKRCPVCNKEVQVK 507
>gi|145514622|ref|XP_001443216.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410594|emb|CAK75819.1| unnamed protein product [Paramecium tetraurelia]
Length = 542
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQ 36
C H++H CI +W Q+SK CP+C +Q
Sbjct: 507 CNHQFHYVCIKQWLQKSKFCPVCKKQ 532
>gi|308805460|ref|XP_003080042.1| ring finger protein (ISS) [Ostreococcus tauri]
gi|116058501|emb|CAL53690.1| ring finger protein (ISS) [Ostreococcus tauri]
Length = 130
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 8/39 (20%)
Query: 3 FCLFQV--------TSCKHEYHLQCILEWSQRSKECPIC 33
CL QV CKH YH +CI W +RS+ CP+C
Sbjct: 81 VCLTQVENGENVKRLGCKHVYHPECIDRWLERSRLCPVC 119
>gi|395859921|ref|XP_003802274.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Otolemur garnettii]
Length = 619
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 583 CSHEYHVHCIDRWLSENSTCPIC 605
>gi|198434927|ref|XP_002128722.1| PREDICTED: similar to anaphase promoting complex subunit 11
[Ciona intestinalis]
Length = 85
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 11 CKHEYHLQCILEW---SQRSKECPICWQQFVLKE 41
C H +H+ CIL+W Q +++CP+C Q++ KE
Sbjct: 51 CTHCFHMHCILKWLHSQQMNQQCPMCRQEWKFKE 84
>gi|195384467|ref|XP_002050939.1| GJ19922 [Drosophila virilis]
gi|194145736|gb|EDW62132.1| GJ19922 [Drosophila virilis]
Length = 1047
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ +C+ EWS+ ECP+C Q F
Sbjct: 110 SCMHQFCFKCLCEWSKIKPECPLCKQPF 137
>gi|357148802|ref|XP_003574899.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like
[Brachypodium distachyon]
Length = 302
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 268 CKHSYHSECINQWLQLNKVCPMC 290
>gi|449268981|gb|EMC79795.1| E3 ubiquitin-protein ligase rnf12-A [Columba livia]
Length = 595
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 559 CSHEYHVHCIDRWLSENSTCPIC 581
>gi|118375671|ref|XP_001021019.1| RING finger protein [Tetrahymena thermophila]
gi|89302786|gb|EAS00774.1| RING finger protein [Tetrahymena thermophila SB210]
Length = 528
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQ-FVLKEPACQELL 48
VT C+H +H +CI EW+ + +CP C ++ F+ + ELL
Sbjct: 428 VTCCRHVFHQECIEEWALKKNQCPFCREKIFIFLYNSMLELL 469
>gi|301767068|ref|XP_002918936.1| PREDICTED: RING finger protein 38-like [Ailuropoda melanoleuca]
Length = 572
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 532 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 560
>gi|118398486|ref|XP_001031571.1| zinc finger protein [Tetrahymena thermophila]
gi|89285902|gb|EAR83908.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 236
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQ-FVL 39
+T C+H YH +CI W Q +K CP+C Q F+L
Sbjct: 204 ITECQHYYHQECIENWFQCNKTCPLCRTQIFIL 236
>gi|340057025|emb|CCC51366.1| predicted zinc finger protein [Trypanosoma vivax Y486]
Length = 349
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
TSC H +H CI+ W +R+K CP C
Sbjct: 316 TSCGHVFHYDCIVPWFKRNKCCPTC 340
>gi|24645397|ref|NP_649902.2| murashka, isoform A [Drosophila melanogaster]
gi|24645399|ref|NP_731366.1| murashka, isoform B [Drosophila melanogaster]
gi|20151609|gb|AAM11164.1| LD30050p [Drosophila melanogaster]
gi|23170810|gb|AAN13432.1| murashka, isoform A [Drosophila melanogaster]
gi|23170811|gb|AAN13433.1| murashka, isoform B [Drosophila melanogaster]
gi|220947288|gb|ACL86187.1| mura-PA [synthetic construct]
gi|220956746|gb|ACL90916.1| mura-PA [synthetic construct]
Length = 868
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 784 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 812
>gi|410988853|ref|XP_004000691.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Felis catus]
Length = 621
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 585 CSHEYHVHCIDRWLSENSTCPIC 607
>gi|195108127|ref|XP_001998644.1| GI23522 [Drosophila mojavensis]
gi|193915238|gb|EDW14105.1| GI23522 [Drosophila mojavensis]
Length = 1020
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 929 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 957
>gi|345807549|ref|XP_859444.2| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 3 [Canis lupus
familiaris]
Length = 625
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 589 CSHEYHVHCIDRWLSENSTCPIC 611
>gi|84997674|ref|XP_953558.1| hypothetical protein [Theileria annulata]
gi|65304555|emb|CAI72880.1| hypothetical protein, conserved [Theileria annulata]
Length = 300
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH+ CI+ W +R CP+C
Sbjct: 241 CKHVYHVNCIIPWLKRRNSCPVC 263
>gi|327288909|ref|XP_003229167.1| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like [Anolis
carolinensis]
Length = 586
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 550 CSHEYHVHCIDRWLSENSTCPIC 572
>gi|339233480|ref|XP_003381857.1| zinc/RING finger protein 3 [Trichinella spiralis]
gi|316979281|gb|EFV62089.1| zinc/RING finger protein 3 [Trichinella spiralis]
Length = 733
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLK 40
+ +V SC HE+H +C+ W ++ CP+C +L+
Sbjct: 273 ILRVISCGHEFHKKCVDPWLLLNRTCPLCMYNVILE 308
>gi|159464571|ref|XP_001690515.1| hypothetical protein CHLREDRAFT_161785 [Chlamydomonas reinhardtii]
gi|158280015|gb|EDP05774.1| predicted protein [Chlamydomonas reinhardtii]
Length = 190
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C+H YH +C+ +W Q+SK CP+C ++
Sbjct: 163 CRHCYHSECVRQWLQQSKACPVCGKEV 189
>gi|115469704|ref|NP_001058451.1| Os06g0695600 [Oryza sativa Japonica Group]
gi|53791836|dbj|BAD53902.1| putative DNA binding zinc finger protein [Oryza sativa Japonica
Group]
gi|113596491|dbj|BAF20365.1| Os06g0695600 [Oryza sativa Japonica Group]
gi|215694615|dbj|BAG89806.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636148|gb|EEE66280.1| hypothetical protein OsJ_22486 [Oryza sativa Japonica Group]
Length = 579
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+H+YH+ CI EW ++ CPIC
Sbjct: 543 CEHQYHVSCIHEWLRQKNWCPIC 565
>gi|389748069|gb|EIM89247.1| hypothetical protein STEHIDRAFT_119941 [Stereum hirsutum FP-91666
SS1]
Length = 1519
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQF 37
T CKH +H C+ W R++ CP+C F
Sbjct: 1490 TGCKHAFHETCLSRWLARNRTCPVCRLPF 1518
>gi|355716637|gb|AES05675.1| ring finger protein, LIM domain interacting [Mustela putorius furo]
Length = 625
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 589 CSHEYHVHCIDRWLSENSTCPIC 611
>gi|348521174|ref|XP_003448101.1| PREDICTED: RING finger protein 38-like [Oreochromis niloticus]
Length = 742
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 702 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 730
>gi|194746673|ref|XP_001955801.1| GF16054 [Drosophila ananassae]
gi|190628838|gb|EDV44362.1| GF16054 [Drosophila ananassae]
Length = 854
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 767 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 795
>gi|403350055|gb|EJY74472.1| Zinc finger protein [Oxytricha trifallax]
Length = 493
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLK 40
+ CKHEYH C+ +W + K CP+C ++ +K
Sbjct: 461 LNGCKHEYHEGCLGKWLEGEKRCPVCNKEVQVK 493
>gi|322779464|gb|EFZ09656.1| hypothetical protein SINV_05966 [Solenopsis invicta]
Length = 811
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ C+L+WS+ ECP+C Q F
Sbjct: 58 SCLHQFCFTCLLQWSKIKTECPLCKQTF 85
>gi|311276513|ref|XP_003135236.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Sus scrofa]
gi|335306207|ref|XP_003360418.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Sus scrofa]
gi|350595776|ref|XP_003484178.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 623
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 587 CSHEYHVHCIDRWLSENSTCPIC 609
>gi|222641988|gb|EEE70120.1| hypothetical protein OsJ_30137 [Oryza sativa Japonica Group]
Length = 300
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 266 CKHSYHPECINQWLQINKVCPMC 288
>gi|412985493|emb|CCO18939.1| predicted protein [Bathycoccus prasinos]
Length = 349
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 10 SCKHEYHLQCILEWSQRSK-ECPIC 33
+C H +HL CI+EW++R ECP C
Sbjct: 313 ACAHHFHLACIVEWNERGHSECPTC 337
>gi|326493870|dbj|BAJ85397.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L V C+H++H CI +W Q CP+C
Sbjct: 441 LLGVLKCRHDFHTDCIKKWLQVKNVCPVC 469
>gi|301787517|ref|XP_002929173.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Ailuropoda
melanoleuca]
gi|281350879|gb|EFB26463.1| hypothetical protein PANDA_019274 [Ailuropoda melanoleuca]
Length = 625
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 589 CSHEYHVHCIDRWLSENSTCPIC 611
>gi|195029977|ref|XP_001987848.1| GH22136 [Drosophila grimshawi]
gi|193903848|gb|EDW02715.1| GH22136 [Drosophila grimshawi]
Length = 1077
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ +C+ EWS+ ECP+C Q F
Sbjct: 114 SCMHQFCFKCLCEWSKIKPECPLCKQPF 141
>gi|432848440|ref|XP_004066346.1| PREDICTED: RING finger protein 38-like [Oryzias latipes]
Length = 712
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 672 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 700
>gi|417403353|gb|JAA48484.1| Putative e3 ubiquitin-protein ligase rlim [Desmodus rotundus]
Length = 617
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 581 CSHEYHVHCIDRWLSENSTCPIC 603
>gi|354502929|ref|XP_003513534.1| PREDICTED: hypothetical protein LOC100763629 [Cricetulus griseus]
Length = 1084
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+V +C HEYH +CI W + CP+C +Q +
Sbjct: 1043 IRVLTCCHEYHDECIDPWLSENSTCPVCRRQII 1075
>gi|294464296|gb|ADE77661.1| unknown [Picea sitchensis]
Length = 282
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH+YH CI W Q K CP+C
Sbjct: 250 CKHQYHSDCIKNWLQIKKVCPVC 272
>gi|301119555|ref|XP_002907505.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106017|gb|EEY64069.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 551
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH +H+ CI EW +R+ CP+C
Sbjct: 499 CKHIFHVACIDEWLKRNTSCPMC 521
>gi|315041797|ref|XP_003170275.1| anaphase-promoting complex subunit 11 [Arthroderma gypseum CBS
118893]
gi|311345309|gb|EFR04512.1| anaphase-promoting complex subunit 11 [Arthroderma gypseum CBS
118893]
Length = 87
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKE---CPICWQQFVLKE 41
C + C H +H+ C+L W Q+ CP+C Q+F K+
Sbjct: 45 CTLLIGKCGHSFHMHCLLTWIQQDSAKGLCPMCRQKFEWKQ 85
>gi|229594919|ref|XP_001021139.3| RING finger like protein [Tetrahymena thermophila]
gi|225566505|gb|EAS00893.3| RING finger like protein [Tetrahymena thermophila SB210]
Length = 665
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLK 40
VT C+H +H +C+ EW ++ + CP C Q+ L+
Sbjct: 461 VTICQHIFHHECLEEWLKKQQNCPSCRQELTLQ 493
>gi|169616898|ref|XP_001801864.1| hypothetical protein SNOG_11625 [Phaeosphaeria nodorum SN15]
gi|111060213|gb|EAT81333.1| hypothetical protein SNOG_11625 [Phaeosphaeria nodorum SN15]
Length = 140
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
Q+ CKH YH QC+L W++++ CP+C Q+ +
Sbjct: 44 QLPLCKHFYHYQCLLTWTEQNSTCPMCRQEMFV 76
>gi|397507950|ref|XP_003824440.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
paniscus]
gi|397507952|ref|XP_003824441.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
paniscus]
Length = 622
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 586 CSHEYHVHCIDRWLSENSTCPIC 608
>gi|114689178|ref|XP_001141975.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
troglodytes]
gi|114689180|ref|XP_001142065.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
troglodytes]
gi|410212840|gb|JAA03639.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410212842|gb|JAA03640.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259648|gb|JAA17790.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259650|gb|JAA17791.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294556|gb|JAA25878.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294558|gb|JAA25879.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337801|gb|JAA37847.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337803|gb|JAA37848.1| ring finger protein, LIM domain interacting [Pan troglodytes]
Length = 620
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 584 CSHEYHVHCIDRWLSENSTCPIC 606
>gi|444518192|gb|ELV12009.1| E3 ubiquitin-protein ligase RLIM [Tupaia chinensis]
Length = 558
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 522 CSHEYHVHCIDRWLSENSTCPIC 544
>gi|392570837|gb|EIW64009.1| hypothetical protein TRAVEDRAFT_55066 [Trametes versicolor
FP-101664 SS1]
Length = 444
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFV 38
CKH +H CI+ W + S CP+C Q V
Sbjct: 296 CKHPFHETCIMPWLKNSGTCPVCRYQLV 323
>gi|332239684|ref|XP_003269028.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Nomascus
leucogenys]
Length = 622
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 586 CSHEYHVHCIDRWLSENSTCPIC 608
>gi|34452684|ref|NP_057204.2| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|34452686|ref|NP_899196.1| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|426396456|ref|XP_004064457.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Gorilla
gorilla gorilla]
gi|426396458|ref|XP_004064458.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Gorilla
gorilla gorilla]
gi|143811451|sp|Q9NVW2.3|RLIM_HUMAN RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12;
AltName: Full=Renal carcinoma antigen NY-REN-43
gi|15426504|gb|AAH13357.1| Ring finger protein, LIM domain interacting [Homo sapiens]
gi|119619045|gb|EAW98639.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|119619046|gb|EAW98640.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|123993649|gb|ABM84426.1| ring finger protein 12 [synthetic construct]
gi|123999977|gb|ABM87497.1| ring finger protein 12 [synthetic construct]
gi|306921343|dbj|BAJ17751.1| ring finger protein, LIM domain interacting [synthetic construct]
Length = 624
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 588 CSHEYHVHCIDRWLSENSTCPIC 610
>gi|297710376|ref|XP_002831863.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pongo
abelii]
Length = 624
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 588 CSHEYHVHCIDRWLSENSTCPIC 610
>gi|170571824|ref|XP_001891879.1| hypotetical protein, conserved [Brugia malayi]
gi|158603363|gb|EDP39313.1| hypothetical protein, conserved [Brugia malayi]
Length = 510
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELL 48
+ ++ C H +HL+CI +W + ++ CPIC Q + E++
Sbjct: 405 MVRMLPCAHHFHLKCIDKWLRGNRTCPICRQNVASDDDDTLEMI 448
>gi|395546427|ref|XP_003775089.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Sarcophilus harrisii]
Length = 618
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 582 CSHEYHVHCIDRWLSENSTCPIC 604
>gi|294893842|ref|XP_002774674.1| hypothetical protein Pmar_PMAR006302 [Perkinsus marinus ATCC 50983]
gi|239880067|gb|EER06490.1| hypothetical protein Pmar_PMAR006302 [Perkinsus marinus ATCC 50983]
Length = 945
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESER 55
C+H +H C++ W +RS CP+C VL+E +ESER
Sbjct: 775 CEHFFHRDCLVPWLKRSDSCPVCRLSEVLREIGENVEADKLESER 819
>gi|196000961|ref|XP_002110348.1| hypothetical protein TRIADDRAFT_54253 [Trichoplax adhaerens]
gi|190586299|gb|EDV26352.1| hypothetical protein TRIADDRAFT_54253 [Trichoplax adhaerens]
Length = 283
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+H +H QCI++W QR CP+C
Sbjct: 211 CQHYFHSQCIVQWLQRHGTCPVC 233
>gi|170574403|ref|XP_001892799.1| hypothetical protein [Brugia malayi]
gi|158601450|gb|EDP38357.1| conserved hypothetical protein [Brugia malayi]
Length = 195
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H +HL CIL+W + K CP+C
Sbjct: 24 CGHVFHLHCILQWFENCKTCPVC 46
>gi|149757525|ref|XP_001505027.1| PREDICTED: e3 ubiquitin-protein ligase RLIM isoform 1 [Equus
caballus]
Length = 616
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 580 CSHEYHVHCIDRWLSENSTCPIC 602
>gi|402587627|gb|EJW81562.1| hypothetical protein WUBG_07527 [Wuchereria bancrofti]
Length = 257
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQ 35
L + C+H +H +CIL W +R CPIC Q
Sbjct: 210 LVAILECQHIFHRECILPWLRRHNTCPICRQ 240
>gi|326924458|ref|XP_003208444.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Meleagris
gallopavo]
Length = 593
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 557 CSHEYHVHCIDRWLSENSTCPIC 579
>gi|255540965|ref|XP_002511547.1| protein binding protein, putative [Ricinus communis]
gi|223550662|gb|EEF52149.1| protein binding protein, putative [Ricinus communis]
Length = 219
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H YH QCI+ W Q+S+ CP+C
Sbjct: 192 CLHVYHKQCIINWLQKSRFCPLC 214
>gi|296491526|tpg|DAA33573.1| TPA: ring finger protein 11-like [Bos taurus]
Length = 143
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L + CKH YHL CI +W RS CP+C
Sbjct: 94 LIRPLPCKHVYHLDCINQWLTRSFTCPLC 122
>gi|387019685|gb|AFJ51960.1| e3 ubiquitin-protein ligase RNF12-A-like [Crotalus adamanteus]
Length = 607
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 571 CSHEYHVHCIDRWLSENSTCPIC 593
>gi|7022528|dbj|BAA91632.1| unnamed protein product [Homo sapiens]
Length = 624
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 588 CSHEYHVHCIDRWLSENSTCPIC 610
>gi|354488554|ref|XP_003506433.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
gi|344243810|gb|EGV99913.1| E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
Length = 603
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 567 CSHEYHVHCIDRWLSENSTCPIC 589
>gi|328868397|gb|EGG16775.1| transmembrane protein [Dictyostelium fasciculatum]
Length = 826
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
++ CKH YHL CI W ++K CP C
Sbjct: 460 IRILPCKHHYHLNCIDRWLIQNKSCPFC 487
>gi|312066806|ref|XP_003136445.1| hypothetical protein LOAG_00857 [Loa loa]
Length = 361
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSK----ECPICWQQF 37
C + +CKH +H+ CI++W++ +CP+C Q++
Sbjct: 319 CPLALGACKHAFHMHCIVKWTETQNAARPQCPLCRQEW 356
>gi|296235819|ref|XP_002763060.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Callithrix
jacchus]
Length = 620
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 584 CSHEYHVHCIDRWLSENSTCPIC 606
>gi|388453379|ref|NP_001253768.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|402910577|ref|XP_003917944.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Papio anubis]
gi|383412441|gb|AFH29434.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412443|gb|AFH29435.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412445|gb|AFH29436.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412447|gb|AFH29437.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412449|gb|AFH29438.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412451|gb|AFH29439.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
Length = 624
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 588 CSHEYHVHCIDRWLSENSTCPIC 610
>gi|356511433|ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
Length = 206
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L Q+ CKH +H+ CI W Q + CP+C
Sbjct: 120 LLQIPYCKHVFHISCISNWLQSNSTCPLC 148
>gi|321468766|gb|EFX79749.1| hypothetical protein DAPPUDRAFT_304341 [Daphnia pulex]
Length = 431
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+H YH QCI+ W Q CPIC
Sbjct: 244 CEHYYHTQCIVPWLQLHGTCPIC 266
>gi|291411188|ref|XP_002721870.1| PREDICTED: ring finger protein, LIM domain interacting [Oryctolagus
cuniculus]
Length = 612
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 576 CSHEYHVHCIDRWLSENSTCPIC 598
>gi|170590153|ref|XP_001899837.1| rnf126-prov protein [Brugia malayi]
gi|158592756|gb|EDP31353.1| rnf126-prov protein, putative [Brugia malayi]
Length = 257
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQ 35
L + C+H +H +CIL W +R CPIC Q
Sbjct: 210 LVAILECQHIFHRECILPWLRRHNTCPICRQ 240
>gi|344282004|ref|XP_003412765.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Loxodonta
africana]
Length = 609
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 573 CSHEYHVHCIDRWLSENSTCPIC 595
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 982 LLRVLPCNHEFHAKCVDKWLKSNRTCPIC 1010
>gi|431916794|gb|ELK16555.1| E3 ubiquitin-protein ligase rnf12-A [Pteropus alecto]
Length = 608
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
++ C HEYH+ CI W + CPIC + V
Sbjct: 567 LRILPCSHEYHVHCIDRWLAENTTCPICRGKVV 599
>gi|393905732|gb|EFO27624.2| hypothetical protein LOAG_00857 [Loa loa]
Length = 363
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSK----ECPICWQQF 37
C + +CKH +H+ CI++W++ +CP+C Q++
Sbjct: 321 CPLALGACKHAFHMHCIVKWTETQNAARPQCPLCRQEW 358
>gi|291221742|ref|XP_002730880.1| PREDICTED: zinc and ring finger 3-like [Saccoglossus kowalevskii]
Length = 715
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIES 53
+V SC HE+H C+ W +++ CP+C +++ P+ L+A E+
Sbjct: 278 LRVVSCSHEFHRHCVDPWLIKNRTCPLCLHN-IIEYPSTASALSANEA 324
>gi|195330386|ref|XP_002031885.1| GM26248 [Drosophila sechellia]
gi|194120828|gb|EDW42871.1| GM26248 [Drosophila sechellia]
Length = 872
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 788 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 816
>gi|432120081|gb|ELK38694.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 612
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 576 CSHEYHVHCIDRWLSENSTCPIC 598
>gi|405975403|gb|EKC39969.1| Ubiquitin-conjugating enzyme E2 Q2 [Crassostrea gigas]
Length = 738
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC----WQQFVLKEPACQELLAAIESER 55
VTSC H Y CI EW R CP C Q ++K+ L+A I ER
Sbjct: 372 VTSCGHRYCFTCIKEWVDRKHTCPCCNARLEQSSLIKDHQFDSLIATITCER 423
>gi|40789045|dbj|BAA83052.2| KIAA1100 protein [Homo sapiens]
Length = 444
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 404 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 432
>gi|12850423|dbj|BAB28712.1| unnamed protein product [Mus musculus]
Length = 600
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 564 CSHEYHVHCIDRWLSENSTCPIC 586
>gi|26325250|dbj|BAC26379.1| unnamed protein product [Mus musculus]
Length = 600
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 564 CSHEYHVHCIDRWLSENSTCPIC 586
>gi|426257257|ref|XP_004022246.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Ovis aries]
Length = 610
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 574 CSHEYHVHCIDRWLSENSTCPIC 596
>gi|342181196|emb|CCC90674.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 105
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
C+ SC H +H CI W QR ECP C +++
Sbjct: 63 CVVVRGSCNHIFHEHCITSWVQRRVECPACMKEW 96
>gi|170590155|ref|XP_001899838.1| rnf126-prov protein [Brugia malayi]
gi|158592757|gb|EDP31354.1| rnf126-prov protein, putative [Brugia malayi]
Length = 250
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQ 35
L + C+H +H +CIL W +R CPIC Q
Sbjct: 203 LVAILECQHIFHRECILPWLRRHNTCPICRQ 233
>gi|149726055|ref|XP_001502682.1| PREDICTED: RING finger protein 44 [Equus caballus]
Length = 432
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|440910350|gb|ELR60156.1| E3 ubiquitin-protein ligase RLIM [Bos grunniens mutus]
Length = 611
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 575 CSHEYHVHCIDRWLSENSTCPIC 597
>gi|300796903|ref|NP_001179251.1| E3 ubiquitin-protein ligase RLIM [Bos taurus]
gi|296470869|tpg|DAA12984.1| TPA: ring finger protein, LIM domain interacting-like isoform 1
[Bos taurus]
gi|296470870|tpg|DAA12985.1| TPA: ring finger protein, LIM domain interacting-like isoform 2
[Bos taurus]
Length = 611
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 575 CSHEYHVHCIDRWLSENSTCPIC 597
>gi|47078289|ref|NP_035406.3| E3 ubiquitin-protein ligase RLIM [Mus musculus]
gi|259016319|sp|Q9WTV7.2|RLIM_MOUSE RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12
gi|15277964|gb|AAH12960.1| Ring finger protein, LIM domain interacting [Mus musculus]
gi|148682142|gb|EDL14089.1| ring finger protein 12, isoform CRA_a [Mus musculus]
gi|148682143|gb|EDL14090.1| ring finger protein 12, isoform CRA_a [Mus musculus]
Length = 600
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 564 CSHEYHVHCIDRWLSENSTCPIC 586
>gi|253743059|gb|EES99599.1| HRT1-like protein [Giardia intestinalis ATCC 50581]
Length = 89
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFV 38
C HEYH+ CI +W +K CP+C +V
Sbjct: 58 CGHEYHIHCIQQWVDSNKTCPLCMAAWV 85
>gi|10944884|emb|CAC14228.1| RING zinc finger LIM domain binding protein [Homo sapiens]
Length = 624
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 588 CSHEYHVHCIDRWLSENSTCPIC 610
>gi|403337819|gb|EJY68133.1| zf-C3HC4 multi-domain protein [Oxytricha trifallax]
Length = 625
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
V C H Y L+CI W++ CP+C ++F+
Sbjct: 143 VIDCNHYYCLECIKHWAENENTCPLCKKEFM 173
>gi|224098363|ref|XP_002199379.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Taeniopygia
guttata]
Length = 595
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 559 CSHEYHVHCIDRWLSENSTCPIC 581
>gi|440790488|gb|ELR11770.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 474
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H H C+L W QR + CPIC
Sbjct: 291 CGHILHFHCLLNWLQRQQTCPIC 313
>gi|47223961|emb|CAG06138.1| unnamed protein product [Tetraodon nigroviridis]
Length = 84
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 11 CKHEYHLQCILEW---SQRSKECPICWQQFVLKE 41
C H +H+ CIL+W Q ++CP+C Q++ KE
Sbjct: 51 CSHCFHMHCILKWLNSQQVQQQCPMCRQEWKFKE 84
>gi|356536412|ref|XP_003536732.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform 2
[Glycine max]
Length = 353
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH +CI W + +K CP+C
Sbjct: 315 LTVLSCKHLYHPECINNWLKINKVCPVC 342
>gi|348521029|ref|XP_003448029.1| PREDICTED: anaphase-promoting complex subunit 11-like
[Oreochromis niloticus]
Length = 84
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 11 CKHEYHLQCILEW---SQRSKECPICWQQFVLKE 41
C H +H+ CIL+W Q ++CP+C Q++ KE
Sbjct: 51 CSHCFHMHCILKWLNSQQVQQQCPMCRQEWKFKE 84
>gi|195572254|ref|XP_002104111.1| GD20788 [Drosophila simulans]
gi|194200038|gb|EDX13614.1| GD20788 [Drosophila simulans]
Length = 877
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 793 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 821
>gi|342185289|emb|CCC94772.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 203
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H +H+ C++ W QRS CP+C
Sbjct: 160 CNHHFHVPCLMSWKQRSNVCPVC 182
>gi|167997059|ref|XP_001751236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697217|gb|EDQ83553.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 708
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
++ C H + CI+EWS+ CPIC Q+FV
Sbjct: 86 KLDCCDHYFCFGCIMEWSKVESRCPICKQRFV 117
>gi|73953315|ref|XP_546217.2| PREDICTED: RING finger protein 44 isoform 1 [Canis lupus
familiaris]
Length = 431
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 391 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 419
>gi|334349289|ref|XP_001362311.2| PREDICTED: hypothetical protein LOC100009881 isoform 2 [Monodelphis
domestica]
Length = 349
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 313 CSHEYHVHCIDRWLSENSTCPIC 335
>gi|71655431|ref|XP_816300.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881417|gb|EAN94449.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 197
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V C H +HLQC+ W QR+ CP+C
Sbjct: 73 VVLCGHGFHLQCLESWRQRASICPVC 98
>gi|403373792|gb|EJY86822.1| hypothetical protein OXYTRI_09877 [Oxytricha trifallax]
Length = 396
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQ 36
+F T C H+YH+QC+ +W ECP C QQ
Sbjct: 358 VFMRTPCNHKYHVQCLTKWMDIRLECPSCRQQ 389
>gi|292609636|ref|XP_695200.4| PREDICTED: RING finger protein 38 [Danio rerio]
Length = 673
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 633 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 661
>gi|403291724|ref|XP_003936919.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Saimiri boliviensis
boliviensis]
Length = 642
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 606 CSHEYHVHCIDRWLSENSTCPIC 628
>gi|301772736|ref|XP_002921790.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44-like
[Ailuropoda melanoleuca]
Length = 498
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 458 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 486
>gi|303314677|ref|XP_003067347.1| PHD-finger family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240107015|gb|EER25202.1| PHD-finger family protein [Coccidioides posadasii C735 delta SOWgp]
Length = 620
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIAS 64
+ + C H H +C+ W +R+ CPIC Q+F + E A + I S + +A
Sbjct: 54 IAHLIPCGHNLHNECLKPWVERANSCPICRQKFNVVELAEHLGGSVISSYAVEDRVQVAE 113
Query: 65 AAPVTFPEDFDNGPD 79
P +D + D
Sbjct: 114 IDPTLIIDDLVDDSD 128
>gi|222632467|gb|EEE64599.1| hypothetical protein OsJ_19451 [Oryza sativa Japonica Group]
Length = 359
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H YH+QCI +W R CP+C
Sbjct: 330 CGHSYHVQCIKQWLSRKNTCPVC 352
>gi|432878751|ref|XP_004073396.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oryzias
latipes]
Length = 602
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH+ CI W + CPIC + ++
Sbjct: 566 CSHEYHVHCIDRWLSENSTCPICRRAVLV 594
>gi|426229341|ref|XP_004008749.1| PREDICTED: RING finger protein 44 [Ovis aries]
Length = 432
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|74007249|ref|XP_855008.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-like [Canis lupus
familiaris]
Length = 625
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
++ C HE+H+ CI W + CPIC Q V
Sbjct: 584 LRILPCSHEFHVHCIDHWLSENSTCPICRGQVV 616
>gi|344265309|ref|XP_003404727.1| PREDICTED: RING finger protein 44 [Loxodonta africana]
Length = 432
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|307105524|gb|EFN53773.1| hypothetical protein CHLNCDRAFT_59731 [Chlorella variabilis]
Length = 95
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 11 CKHEYHLQCILEW--SQRSKECPICWQQFVLKEPA 43
C H +HLQCI W SQ ++CP C +Q+ K+ A
Sbjct: 53 CTHAFHLQCINRWLQSQAEQKCPFCRRQWEFKQAA 87
>gi|242081951|ref|XP_002445744.1| hypothetical protein SORBIDRAFT_07g024950 [Sorghum bicolor]
gi|241942094|gb|EES15239.1| hypothetical protein SORBIDRAFT_07g024950 [Sorghum bicolor]
Length = 314
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 277 CKHPYHSECINQWLQLNKVCPMC 299
>gi|167522565|ref|XP_001745620.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775969|gb|EDQ89591.1| predicted protein [Monosiga brevicollis MX1]
Length = 889
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L Q+ CKH +H QC+ W +++ CP+C
Sbjct: 675 LVQLKRCKHIFHAQCVQGWLEKNTTCPVC 703
>gi|338728980|ref|XP_003365802.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Equus caballus]
Length = 627
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Query: 2 QFCLFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ C+ C HEYH+ CI W + CPIC
Sbjct: 585 ELCIL---PCSHEYHVHCITRWLAENSTCPIC 613
>gi|149411042|ref|XP_001505684.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like
[Ornithorhynchus anatinus]
Length = 595
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 559 CSHEYHVHCIDRWLSENSTCPIC 581
>gi|145505561|ref|XP_001438747.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405919|emb|CAK71350.1| unnamed protein product [Paramecium tetraurelia]
Length = 361
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 8/38 (21%)
Query: 4 CLFQVTS--------CKHEYHLQCILEWSQRSKECPIC 33
CLF+ CKH YH CI W Q +K+CP+C
Sbjct: 285 CLFEFKEEEKVRELPCKHIYHSSCIKNWLQNNKQCPLC 322
>gi|332021837|gb|EGI62177.1| E3 ubiquitin-protein ligase Topor [Acromyrmex echinatior]
Length = 1320
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ C+L+WS+ ECP+C Q F
Sbjct: 584 SCLHQFCFTCLLQWSKIKTECPLCKQTF 611
>gi|320037672|gb|EFW19609.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 620
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIAS 64
+ + C H H +C+ W +R+ CPIC Q+F + E A + I S + +A
Sbjct: 54 IAHLIPCGHNLHNECLKPWVERANSCPICRQKFNVVELAEHLGGSVISSYAVEDRVQVAE 113
Query: 65 AAPVTFPEDFDNGPD 79
P +D + D
Sbjct: 114 IDPTLIIDDLVDDSD 128
>gi|312077126|ref|XP_003141166.1| rnf126-prov protein [Loa loa]
gi|307763668|gb|EFO22902.1| hypothetical protein LOAG_05581 [Loa loa]
Length = 255
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQ 35
L + C+H +H +CIL W +R CPIC Q
Sbjct: 208 LVAILECQHIFHRECILPWLRRHNTCPICRQ 238
>gi|7662486|ref|NP_055716.1| RING finger protein 44 [Homo sapiens]
gi|74758994|sp|Q7L0R7.1|RNF44_HUMAN RecName: Full=RING finger protein 44
gi|24980826|gb|AAH39833.1| Ring finger protein 44 [Homo sapiens]
gi|38969938|gb|AAH63297.1| Ring finger protein 44 [Homo sapiens]
gi|119605477|gb|EAW85071.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|119605478|gb|EAW85072.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|168269688|dbj|BAG09971.1| RING finger protein 44 [synthetic construct]
Length = 432
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|397470558|ref|XP_003806886.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44 [Pan
paniscus]
Length = 432
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|355750449|gb|EHH54787.1| hypothetical protein EGM_15690 [Macaca fascicularis]
Length = 299
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 259 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 287
>gi|297295801|ref|XP_001091221.2| PREDICTED: RING finger protein 44-like [Macaca mulatta]
Length = 432
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|218200728|gb|EEC83155.1| hypothetical protein OsI_28368 [Oryza sativa Indica Group]
Length = 300
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+CKH YHL CI +W ++ CPIC
Sbjct: 268 ACKHYYHLACIQQWLRQKNWCPIC 291
>gi|125583965|gb|EAZ24896.1| hypothetical protein OsJ_08675 [Oryza sativa Japonica Group]
Length = 439
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLK-EPACQELLAAIESERLSKSRPIASAA 66
C H +HL+CI W CP+C + + + P C ++ +ESE SR + AA
Sbjct: 142 CSHAFHLECIDTWLLSHSTCPLCRRSLLAELSPTCTPVVMVLESE---SSRDMVHAA 195
>gi|145527738|ref|XP_001449669.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417257|emb|CAK82272.1| unnamed protein product [Paramecium tetraurelia]
Length = 405
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAA 66
C H +H QC+ EW++++ CP+C Q+F + EL +++++ ++S P A
Sbjct: 304 CHHIFHDQCLSEWTKKNTNCPVCRQEF-----SESELKRLLQTQKQTESSPFNRHA 354
>gi|355716966|gb|AES05780.1| ring finger protein 44 [Mustela putorius furo]
Length = 431
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|169641968|gb|AAI60676.1| Unknown (protein for IMAGE:8330050) [Xenopus laevis]
Length = 508
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 468 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 496
>gi|410040033|ref|XP_001136491.3| PREDICTED: RING finger protein 44 isoform 2 [Pan troglodytes]
Length = 430
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 390 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 418
>gi|410949126|ref|XP_003981275.1| PREDICTED: RING finger protein 44 isoform 1 [Felis catus]
Length = 431
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 391 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 419
>gi|405967974|gb|EKC33083.1| Protein regulator of cytokinesis 1 [Crassostrea gigas]
Length = 1813
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 1773 LLRVLPCSHEFHAKCVDKWLKTNRTCPIC 1801
>gi|395841991|ref|XP_003793805.1| PREDICTED: uncharacterized protein LOC100942711 [Otolemur
garnettii]
Length = 620
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C HEYH+ CI W + CPIC
Sbjct: 581 LRVLPCSHEYHVHCIDRWLSDNSTCPIC 608
>gi|356536410|ref|XP_003536731.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform 1
[Glycine max]
Length = 344
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH +CI W + +K CP+C
Sbjct: 306 LTVLSCKHLYHPECINNWLKINKVCPVC 333
>gi|194903083|ref|XP_001980810.1| GG17363 [Drosophila erecta]
gi|190652513|gb|EDV49768.1| GG17363 [Drosophila erecta]
Length = 887
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 803 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 831
>gi|332228405|ref|XP_003263380.1| PREDICTED: RING finger protein 38 isoform 1 [Nomascus leucogenys]
Length = 724
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 684 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 712
>gi|326529613|dbj|BAK04753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH CI +W Q +K CP+C
Sbjct: 258 CKHSYHSDCINQWLQLNKVCPMC 280
>gi|311249623|ref|XP_003123707.1| PREDICTED: RING finger protein 44 isoform 1 [Sus scrofa]
Length = 432
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|115480369|ref|NP_001063778.1| Os09g0535100 [Oryza sativa Japonica Group]
gi|50726579|dbj|BAD34213.1| unknown protein [Oryza sativa Japonica Group]
gi|113632011|dbj|BAF25692.1| Os09g0535100 [Oryza sativa Japonica Group]
gi|215697665|dbj|BAG91659.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 325
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 291 CKHSYHPECINQWLQINKVCPMC 313
>gi|383854638|ref|XP_003702827.1| PREDICTED: uncharacterized protein LOC100876127 [Megachile
rotundata]
Length = 777
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ C+L+WS+ ECP+C Q F
Sbjct: 58 SCLHQFCFTCLLQWSKIKTECPLCKQTF 85
>gi|332228409|ref|XP_003263382.1| PREDICTED: RING finger protein 38 isoform 3 [Nomascus leucogenys]
Length = 674
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 634 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 662
>gi|302595801|sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=RING
finger protein 1
gi|298155591|gb|ADI58769.1| RING-type ubiquitin E3 ligase [Gossypium hirsutum]
Length = 338
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
CKH YH C+L W + CP+C + +P
Sbjct: 242 CKHLYHKDCLLPWLELHNSCPVCRHELPTDDP 273
>gi|218202524|gb|EEC84951.1| hypothetical protein OsI_32172 [Oryza sativa Indica Group]
Length = 325
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 291 CKHSYHPECINQWLQINKVCPMC 313
>gi|432843357|ref|XP_004065596.1| PREDICTED: anaphase-promoting complex subunit 11-like [Oryzias
latipes]
Length = 84
Score = 40.0 bits (92), Expect = 1.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 11 CKHEYHLQCILEW---SQRSKECPICWQQFVLKE 41
C H +H+ CIL+W Q ++CP+C Q++ KE
Sbjct: 51 CSHCFHMHCILKWLNSQQVQQQCPMCRQEWKFKE 84
>gi|119605476|gb|EAW85070.1| ring finger protein 44, isoform CRA_a [Homo sapiens]
Length = 408
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 368 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 396
>gi|67846064|ref|NP_001020063.1| E3 ubiquitin-protein ligase RLIM [Rattus norvegicus]
gi|392355774|ref|XP_003752129.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Rattus
norvegicus]
gi|66910661|gb|AAH97491.1| Ring finger protein 12 [Rattus norvegicus]
gi|149055585|gb|EDM07169.1| ring finger protein 12, isoform CRA_b [Rattus norvegicus]
Length = 603
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 567 CSHEYHVHCIDRWLSENSTCPIC 589
>gi|402873505|ref|XP_003900614.1| PREDICTED: RING finger protein 44 isoform 1 [Papio anubis]
Length = 432
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|402579379|gb|EJW73331.1| hypothetical protein WUBG_15762 [Wuchereria bancrofti]
Length = 204
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELL 48
+ ++ C H +HL+CI +W + ++ CPIC Q E E++
Sbjct: 97 MVRMLPCAHHFHLKCIDKWLRGNRTCPICRQNVASDEDDSLEMI 140
>gi|363744649|ref|XP_424864.3| PREDICTED: RING finger protein 38 [Gallus gallus]
Length = 468
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 430 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 458
>gi|125553214|gb|EAY98923.1| hypothetical protein OsI_20878 [Oryza sativa Indica Group]
Length = 359
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H YH+QCI +W R CP+C
Sbjct: 330 CGHSYHVQCIKQWLSRKNTCPVC 352
>gi|71652973|ref|XP_815133.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70880164|gb|EAN93282.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 197
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V C H +HLQC+ W QR+ CP+C
Sbjct: 73 VVLCGHGFHLQCLESWRQRASICPVC 98
>gi|383853830|ref|XP_003702425.1| PREDICTED: TRAF-interacting protein-like [Megachile rotundata]
Length = 410
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQF 37
T C H +HLQC+ W +RSK CP C ++
Sbjct: 21 TRCGHVFHLQCLSPWLERSKSCPQCREKV 49
>gi|217075118|gb|ACJ85919.1| unknown [Medicago truncatula]
gi|388515517|gb|AFK45820.1| unknown [Medicago truncatula]
Length = 339
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH +CI W + +K CP+C
Sbjct: 301 LTVLSCKHLYHPECINNWLKINKVCPVC 328
>gi|5360113|gb|AAD42875.1|AF155109_1 putative ring zinc finger protein NY-REN-43 antigen [Homo sapiens]
gi|189054525|dbj|BAG37298.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 447 CSHEYHVHCIDRWLSENSTCPIC 469
>gi|403290096|ref|XP_003936168.1| PREDICTED: RING finger protein 44 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 429
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 389 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 417
>gi|393911472|gb|EJD76322.1| hypothetical protein, variant [Loa loa]
Length = 248
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQ 35
L + C+H +H +CIL W +R CPIC Q
Sbjct: 201 LVAILECQHIFHRECILPWLRRHNTCPICRQ 231
>gi|356575434|ref|XP_003555846.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like isoform 2
[Glycine max]
Length = 341
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH +CI W + +K CP+C
Sbjct: 303 LTVLSCKHLYHPECINNWLKINKVCPVC 330
>gi|242077066|ref|XP_002448469.1| hypothetical protein SORBIDRAFT_06g027620 [Sorghum bicolor]
gi|241939652|gb|EES12797.1| hypothetical protein SORBIDRAFT_06g027620 [Sorghum bicolor]
Length = 374
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+CKH YHL CI W ++ CPIC
Sbjct: 343 ACKHYYHLSCIQHWLRQKNWCPIC 366
>gi|147784488|emb|CAN74950.1| hypothetical protein VITISV_000265 [Vitis vinifera]
Length = 245
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H YH CI++W +RS CP+C
Sbjct: 214 CSHVYHKDCIIQWLERSHMCPLC 236
>gi|417411075|gb|JAA51991.1| Putative ring finger protein 44, partial [Desmodus rotundus]
Length = 482
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 442 LLRVLPCGHEFHAKCVDKWLKANRTCPIC 470
>gi|298715393|emb|CBJ28004.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
putative [Ectocarpus siliculosus]
Length = 1047
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQEL 47
+C H Y CILEWS+ + +CP C +F + A QEL
Sbjct: 730 ACSHRYCYTCILEWSKITNKCPQCKARFHTVK-AVQEL 766
>gi|403341818|gb|EJY70225.1| Zinc finger (ISS) [Oxytricha trifallax]
Length = 384
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH CI +W K CP+C + ++
Sbjct: 354 CLHEYHHDCINKWLNEEKRCPVCNKDVII 382
>gi|357444873|ref|XP_003592714.1| RING finger protein [Medicago truncatula]
gi|355481762|gb|AES62965.1| RING finger protein [Medicago truncatula]
Length = 339
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH +CI W + +K CP+C
Sbjct: 301 LTVLSCKHLYHPECINNWLKINKVCPVC 328
>gi|225438752|ref|XP_002278073.1| PREDICTED: uncharacterized protein LOC100247468 [Vitis vinifera]
gi|296082400|emb|CBI21405.3| unnamed protein product [Vitis vinifera]
Length = 244
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI EW + CPIC
Sbjct: 215 CGHEYHVVCIKEWLSKKNSCPIC 237
>gi|241951728|ref|XP_002418586.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641925|emb|CAX43889.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 532
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 15 YHLQCILEWSQRSKECPICWQQF 37
YH QCIL+WSQ+S CP C +F
Sbjct: 39 YHDQCILQWSQKSNSCPTCRNRF 61
>gi|195499458|ref|XP_002096956.1| GE24768 [Drosophila yakuba]
gi|194183057|gb|EDW96668.1| GE24768 [Drosophila yakuba]
Length = 1040
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 956 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 984
>gi|68482376|ref|XP_714820.1| hypothetical protein CaO19.2229 [Candida albicans SC5314]
gi|68482501|ref|XP_714760.1| hypothetical protein CaO19.9771 [Candida albicans SC5314]
gi|46436353|gb|EAK95716.1| hypothetical protein CaO19.9771 [Candida albicans SC5314]
gi|46436416|gb|EAK95778.1| hypothetical protein CaO19.2229 [Candida albicans SC5314]
Length = 548
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 15 YHLQCILEWSQRSKECPICWQQF 37
YH QCIL+WSQ+S CP C +F
Sbjct: 39 YHDQCILQWSQKSNGCPTCRNRF 61
>gi|452000545|gb|EMD93006.1| hypothetical protein COCHEDRAFT_1133362 [Cochliobolus
heterostrophus C5]
Length = 335
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 5 LFQVTSCKHEYHLQCILEW-SQRSKECPICWQQFVLKE 41
+ ++T C HE+H +C++ W R CPIC ++ KE
Sbjct: 179 ILKLTVCSHEFHAECLVSWFVLRKTSCPICRSMYMTKE 216
>gi|426351155|ref|XP_004043123.1| PREDICTED: RING finger protein 44 [Gorilla gorilla gorilla]
Length = 413
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 373 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 401
>gi|238883576|gb|EEQ47214.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 546
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 15 YHLQCILEWSQRSKECPICWQQF 37
YH QCIL+WSQ+S CP C +F
Sbjct: 39 YHDQCILQWSQKSNGCPTCRNRF 61
>gi|558545|emb|CAA85321.1| protein containing C-terminal RING-finger [Lotus japonicus]
gi|1771195|emb|CAA70734.1| RING-finger protein [Lotus japonicus]
Length = 549
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
+ +C H+YH+ CI +W K CPIC
Sbjct: 512 LKTCGHDYHVNCIKKWLSMKKLCPIC 537
>gi|356495693|ref|XP_003516708.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
Length = 203
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPA 43
T C H H++CI +W +R+ CP+C + P+
Sbjct: 168 TQCDHHVHIECIHDWMKRNSLCPVCNKDVAFNSPS 202
>gi|343427490|emb|CBQ71017.1| related to anaphase promoting complex subunit 11 [Sporisorium
reilianum SRZ2]
Length = 100
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPIC---WQQ 36
C C HE+HL CI++W Q + CP C W++
Sbjct: 46 CPLLFGKCSHEFHLHCIMKWLQDNDGCPSCRRPWEE 81
>gi|195444736|ref|XP_002070005.1| GK11818 [Drosophila willistoni]
gi|194166090|gb|EDW80991.1| GK11818 [Drosophila willistoni]
Length = 846
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 763 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 791
>gi|147769445|emb|CAN72494.1| hypothetical protein VITISV_037014 [Vitis vinifera]
Length = 316
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+HEYH+ CI EW + CPIC
Sbjct: 287 CEHEYHVACIREWLVQKNSCPIC 309
>gi|125541420|gb|EAY87815.1| hypothetical protein OsI_09234 [Oryza sativa Indica Group]
Length = 428
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLK-EPACQELLAAIESERLSKSRPIASAA 66
C H +HL+CI W CP+C + + + P C ++ +ESE SR + AA
Sbjct: 142 CSHAFHLECIDTWLLSHSTCPLCRRSLLAELSPTCTPVVMVLESE---SSRDMVHAA 195
>gi|410917402|ref|XP_003972175.1| PREDICTED: anaphase-promoting complex subunit 11-like [Takifugu
rubripes]
Length = 84
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 11 CKHEYHLQCILEW---SQRSKECPICWQQFVLKE 41
C H +H+ CIL+W Q ++CP+C Q++ KE
Sbjct: 51 CSHCFHMHCILKWLNSQQVQQQCPMCRQEWKFKE 84
>gi|300794460|ref|NP_001179642.1| RING finger protein 44 [Bos taurus]
gi|296485561|tpg|DAA27676.1| TPA: ring finger protein 44 [Bos taurus]
Length = 432
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|380011323|ref|XP_003689758.1| PREDICTED: TRAF-interacting protein-like [Apis florea]
Length = 389
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
T C H +HL C+ +W +RSK CP C
Sbjct: 21 TRCGHVFHLHCLTQWLERSKSCPQC 45
>gi|332263048|ref|XP_003280568.1| PREDICTED: RING finger protein 44 [Nomascus leucogenys]
Length = 423
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 383 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 411
>gi|326680977|ref|XP_003201680.1| PREDICTED: hypothetical protein LOC796087 [Danio rerio]
Length = 939
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +CI EWS+ ECP+C Q F
Sbjct: 49 CLHQFCFRCIHEWSKNKAECPLCKQPF 75
>gi|224088434|ref|XP_002186805.1| PREDICTED: RING finger protein 38-like [Taeniopygia guttata]
Length = 475
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 435 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 463
>gi|217075302|gb|ACJ86011.1| unknown [Medicago truncatula]
Length = 332
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH +CI W + +K CP+C
Sbjct: 294 LTVLSCKHLYHPECINNWLKINKVCPVC 321
>gi|356575432|ref|XP_003555845.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like isoform 1
[Glycine max]
Length = 335
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH +CI W + +K CP+C
Sbjct: 297 LTVLSCKHLYHPECINNWLKINKVCPVC 324
>gi|357444871|ref|XP_003592713.1| RING finger protein [Medicago truncatula]
gi|355481761|gb|AES62964.1| RING finger protein [Medicago truncatula]
Length = 333
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH +CI W + +K CP+C
Sbjct: 295 LTVLSCKHLYHPECINNWLKINKVCPVC 322
>gi|145507746|ref|XP_001439828.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407023|emb|CAK72431.1| unnamed protein product [Paramecium tetraurelia]
Length = 360
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 8/38 (21%)
Query: 4 CLFQVTS--------CKHEYHLQCILEWSQRSKECPIC 33
CLF+ CKH YH CI W Q +K+CP+C
Sbjct: 284 CLFEFKEEEKVRELPCKHIYHSSCIKNWLQNNKQCPLC 321
>gi|47900528|gb|AAT39263.1| unknown protein [Oryza sativa Japonica Group]
Length = 364
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H YH+QCI +W R CP+C
Sbjct: 335 CGHSYHVQCIKQWLSRKNTCPVC 357
>gi|429963914|gb|ELA45912.1| hypothetical protein VCUG_02605 [Vavraia culicis 'floridensis']
Length = 327
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPIC 33
++ CKH +HL+C+ W ++ + CPIC
Sbjct: 274 RIIKCKHSFHLECLKRWVEQQQVCPIC 300
>gi|448118631|ref|XP_004203548.1| Piso0_001160 [Millerozyma farinosa CBS 7064]
gi|448121045|ref|XP_004204131.1| Piso0_001160 [Millerozyma farinosa CBS 7064]
gi|359384416|emb|CCE79120.1| Piso0_001160 [Millerozyma farinosa CBS 7064]
gi|359384999|emb|CCE78534.1| Piso0_001160 [Millerozyma farinosa CBS 7064]
Length = 534
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+ C H YH CI++WS +S CP C +++
Sbjct: 23 IEGCLHFYHSDCIIQWSNQSNSCPTCRRKY 52
>gi|196014201|ref|XP_002116960.1| hypothetical protein TRIADDRAFT_61032 [Trichoplax adhaerens]
gi|190580451|gb|EDV20534.1| hypothetical protein TRIADDRAFT_61032 [Trichoplax adhaerens]
Length = 197
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+ ++ CKHE+H C+ W + + CP+C F+
Sbjct: 40 VLRILPCKHEFHKTCVDSWLENKQTCPLCKSNFL 73
>gi|225426249|ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
gi|297742383|emb|CBI34532.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L QV SCKH +H CI W + + CP+C
Sbjct: 116 LHQVPSCKHVFHADCIYHWLRTNSTCPLC 144
>gi|344303423|gb|EGW33672.1| anaphase promoting complex subunit 11 [Spathaspora passalidarum
NRRL Y-27907]
Length = 139
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 9 TSCKHEYHLQCILEWSQRSKE---CPICWQQFVLKEP 42
+ C H +HL CIL+W ++ CP+C Q F KEP
Sbjct: 59 SGCTHNFHLHCILKWLEQESSKGLCPMCRQIFTFKEP 95
>gi|324506141|gb|ADY42630.1| RING finger protein 38 [Ascaris suum]
Length = 505
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C H YH++C+ +W + ++ CPIC
Sbjct: 430 VRVLPCDHHYHVKCVDKWLKTNRTCPIC 457
>gi|318175152|ref|NP_001187931.1| anaphase-promoting complex subunit 11 [Ictalurus punctatus]
gi|308324361|gb|ADO29315.1| anaphase-promoting complex subunit 11 [Ictalurus punctatus]
Length = 88
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 11 CKHEYHLQCILEW---SQRSKECPICWQQFVLKE 41
C H +H+ CIL+W Q ++CP+C Q++ KE
Sbjct: 51 CSHCFHMHCILKWLNSQQVQQQCPMCRQEWKFKE 84
>gi|171686276|ref|XP_001908079.1| hypothetical protein [Podospora anserina S mat+]
gi|170943099|emb|CAP68752.1| unnamed protein product [Podospora anserina S mat+]
Length = 646
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+ Q+ C H H C+ EWS+++ CPIC Q F
Sbjct: 65 VAQIPICGHMLHDVCLREWSEKANSCPICRQTF 97
>gi|125562449|gb|EAZ07897.1| hypothetical protein OsI_30152 [Oryza sativa Indica Group]
Length = 300
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 266 CKHSYHSECINQWLQLNKVCPMC 288
>gi|120577569|gb|AAI30125.1| LOC100037019 protein [Xenopus laevis]
Length = 496
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 456 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 484
>gi|324505404|gb|ADY42324.1| RING finger protein 38 [Ascaris suum]
Length = 522
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C H YH++C+ +W + ++ CPIC
Sbjct: 447 VRVLPCDHHYHVKCVDKWLKTNRTCPIC 474
>gi|67968828|dbj|BAE00771.1| unnamed protein product [Macaca fascicularis]
Length = 483
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 447 CSHEYHVHCIDRWLSENSTCPIC 469
>gi|115449153|ref|NP_001048356.1| Os02g0790600 [Oryza sativa Japonica Group]
gi|47497061|dbj|BAD19113.1| putative RING finger 1 [Oryza sativa Japonica Group]
gi|113537887|dbj|BAF10270.1| Os02g0790600 [Oryza sativa Japonica Group]
gi|215704865|dbj|BAG94893.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 428
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLK-EPACQELLAAIESERLSKSRPIASAA 66
C H +HL+CI W CP+C + + + P C ++ +ESE SR + AA
Sbjct: 142 CSHAFHLECIDTWLLSHSTCPLCRRSLLAELSPTCTPVVMVLESE---SSRDMVHAA 195
>gi|258566890|ref|XP_002584189.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905635|gb|EEP80036.1| predicted protein [Uncinocarpus reesii 1704]
Length = 618
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIAS 64
+ + C H H +C+ W +R+ CPIC Q+F + E A I S + +A
Sbjct: 52 IAHLIPCGHNLHNECLKPWVERANSCPICRQKFNVVELAENLGGQIISSYAVEDRVQVAE 111
Query: 65 AAPVTFPEDFDNGPD 79
P ED + D
Sbjct: 112 IDPTLIIEDLIDDSD 126
>gi|336467322|gb|EGO55486.1| hypothetical protein NEUTE1DRAFT_28197 [Neurospora tetrasperma
FGSC 2508]
gi|350288049|gb|EGZ69285.1| RING/U-box, partial [Neurospora tetrasperma FGSC 2509]
Length = 87
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSK---ECPICWQQF 37
C C H +H+ CILEW ++ +CP+C Q+F
Sbjct: 45 CSLLSGKCGHNFHMHCILEWIKQDSAKGQCPMCRQKF 81
>gi|332228407|ref|XP_003263381.1| PREDICTED: RING finger protein 38 isoform 2 [Nomascus leucogenys]
Length = 511
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 471 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 499
>gi|261328404|emb|CBH11381.1| conserved hypothetical protein, conserved [Trypanosoma brucei
gambiense DAL972]
Length = 106
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
CL C H++H CI +W ++ + CP C +Q+V E
Sbjct: 64 CLVVKGECGHKFHAHCIGDWGEQHQVCPACRKQWVAAE 101
>gi|403331278|gb|EJY64578.1| murashka, isoform C [Oxytricha trifallax]
Length = 1406
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESER 55
+F + C H +H +CI EW R CP C K+ C ++S R
Sbjct: 1082 MFMILPCLHRFHSECIREWFSRRNTCPNC------KDRVCDHFEEELKSMR 1126
>gi|328793903|ref|XP_001122041.2| PREDICTED: TRAF-interacting protein-like [Apis mellifera]
Length = 358
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
T C H +HL C+ +W +RSK CP C
Sbjct: 21 TRCGHVFHLHCLTQWLERSKSCPQC 45
>gi|326931146|ref|XP_003211695.1| PREDICTED: RING finger protein 43-like, partial [Meleagris
gallopavo]
Length = 568
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAA 50
++ SC HE+H +C+ W Q+ CP+C + ++ Q +A
Sbjct: 256 LRIISCSHEFHRECVDPWLQQHHTCPLCMFNILARDSVDQATVAG 300
>gi|327300120|ref|XP_003234753.1| PHD and RING finger domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326463647|gb|EGD89100.1| PHD and RING finger domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 617
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIAS 64
+ + C H H +C+ W +R+ CPIC Q F + E + AI S + +A
Sbjct: 43 IAHLLPCGHNLHNECLKPWVERANSCPICRQNFNVVELVTKVGGPAISSYVVEDRVQVAD 102
Query: 65 AAPVTFPEDF 74
P +D
Sbjct: 103 IDPSMLGDDL 112
>gi|417411347|gb|JAA52113.1| Putative ring finger protein 38, partial [Desmodus rotundus]
Length = 518
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 478 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 506
>gi|395825788|ref|XP_003786103.1| PREDICTED: anaphase-promoting complex subunit 11 [Otolemur
garnettii]
Length = 84
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 11 CKHEYHLQCILEW---SQRSKECPICWQQFVLKE 41
C H +H+ CIL+W Q + CP+C Q++ KE
Sbjct: 51 CSHCFHMHCILKWLHAQQAQQHCPMCRQEWKFKE 84
>gi|357289912|gb|AET73225.1| hypothetical protein PGAG_00336 [Phaeocystis globosa virus 12T]
gi|357292371|gb|AET73707.1| hypothetical protein PGBG_00396 [Phaeocystis globosa virus 14T]
Length = 178
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
++ C H +H +CI W R+ CP+C
Sbjct: 25 ISKCNHIFHYECIYNWVNRNNSCPVC 50
>gi|444706661|gb|ELW47987.1| RING finger protein 44 [Tupaia chinensis]
Length = 278
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 238 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 266
>gi|148596942|ref|NP_001091950.1| anaphase-promoting complex subunit 11 [Danio rerio]
gi|115527827|gb|AAI24717.1| APC11 anaphase promoting complex subunit 11 homolog (yeast)
[Danio rerio]
Length = 88
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 11 CKHEYHLQCILEW---SQRSKECPICWQQFVLKE 41
C H +H+ CIL+W Q ++CP+C Q++ KE
Sbjct: 51 CSHCFHMHCILKWLNSQQVQQQCPMCRQEWKFKE 84
>gi|355567624|gb|EHH23965.1| RING finger protein 38, partial [Macaca mulatta]
gi|355753195|gb|EHH57241.1| RING finger protein 38, partial [Macaca fascicularis]
Length = 512
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 472 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 500
>gi|363739122|ref|XP_003642121.1| PREDICTED: RING finger protein 44-like [Gallus gallus]
Length = 498
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 458 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 486
>gi|218198816|gb|EEC81243.1| hypothetical protein OsI_24310 [Oryza sativa Indica Group]
Length = 540
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+H+YH+ CI EW ++ CPIC
Sbjct: 504 CEHQYHVPCIHEWLRQKNWCPIC 526
>gi|195037839|ref|XP_001990368.1| GH19305 [Drosophila grimshawi]
gi|193894564|gb|EDV93430.1| GH19305 [Drosophila grimshawi]
Length = 885
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ +V C HE+H +C+ +W + ++ CPIC
Sbjct: 799 MLRVLPCSHEFHAKCVDKWLRSNRTCPIC 827
>gi|355691874|gb|EHH27059.1| hypothetical protein EGK_17168 [Macaca mulatta]
Length = 350
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 310 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 338
>gi|353440930|gb|AEQ94064.1| MIP32849p1 [Drosophila melanogaster]
Length = 333
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 249 LLRVLPCSHEFHAKCVDKWLRSNRTCPIC 277
>gi|310795366|gb|EFQ30827.1| hypothetical protein GLRG_05971 [Glomerella graminicola M1.001]
Length = 93
Score = 39.7 bits (91), Expect = 2.0, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSK---ECPICWQQF 37
C C H +H+ CILEW ++ +CP+C Q+F
Sbjct: 45 CSLLSGKCGHNFHMHCILEWIKQDSAKGQCPMCRQKF 81
>gi|126334064|ref|XP_001371090.1| PREDICTED: RING finger protein 38 [Monodelphis domestica]
Length = 520
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 480 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 508
>gi|403338328|gb|EJY68399.1| RING finger ubiquitin ligase [Oxytricha trifallax]
Length = 716
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+ +T C H+YH +C+L+W +CP C Q+
Sbjct: 659 YMLTPCNHKYHKKCLLQWMNMKMDCPTCRQRL 690
>gi|119175030|ref|XP_001239815.1| hypothetical protein CIMG_09436 [Coccidioides immitis RS]
gi|392870008|gb|EAS28555.2| hypothetical protein CIMG_09436 [Coccidioides immitis RS]
Length = 620
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIAS 64
+ + C H H +C+ W +R+ CPIC Q+F + E A + I S + +A
Sbjct: 54 IAHLIPCGHNLHNECLKPWVERANSCPICRQKFNVVELAEHLGGSVISSYAVEDRVQVAE 113
Query: 65 AAPVTFPEDF 74
P +D
Sbjct: 114 IDPTLIIDDL 123
>gi|115477677|ref|NP_001062434.1| Os08g0548300 [Oryza sativa Japonica Group]
gi|42407550|dbj|BAD10755.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group]
gi|42408731|dbj|BAD09949.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group]
gi|113624403|dbj|BAF24348.1| Os08g0548300 [Oryza sativa Japonica Group]
gi|125604240|gb|EAZ43565.1| hypothetical protein OsJ_28186 [Oryza sativa Japonica Group]
gi|215706910|dbj|BAG93370.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 271 CKHSYHSECINQWLQLNKVCPMC 293
>gi|50949355|emb|CAB66751.3| hypothetical protein [Homo sapiens]
Length = 515
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 475 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 503
>gi|390458123|ref|XP_002743126.2| PREDICTED: RING finger protein 38 isoform 1 [Callithrix jacchus]
gi|403306612|ref|XP_003943819.1| PREDICTED: RING finger protein 38 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 515
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 475 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 503
>gi|37577175|ref|NP_073618.3| RING finger protein 38 isoform 1 [Homo sapiens]
gi|297270600|ref|XP_002800138.1| PREDICTED: RING finger protein 38 isoform 3 [Macaca mulatta]
gi|297684041|ref|XP_002819666.1| PREDICTED: RING finger protein 38 isoform 1 [Pongo abelii]
gi|397519528|ref|XP_003829910.1| PREDICTED: RING finger protein 38 isoform 1 [Pan paniscus]
gi|426361761|ref|XP_004048068.1| PREDICTED: RING finger protein 38 isoform 1 [Gorilla gorilla
gorilla]
gi|56749664|sp|Q9H0F5.4|RNF38_HUMAN RecName: Full=RING finger protein 38
Length = 515
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 475 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 503
>gi|432102802|gb|ELK30276.1| RING finger protein 44 [Myotis davidii]
Length = 457
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 417 LLRVLPCSHEFHTKCVDKWLKANRTCPIC 445
>gi|355716933|gb|AES05771.1| ring finger protein 38 [Mustela putorius furo]
Length = 460
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 421 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 449
>gi|410042605|ref|XP_003951472.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
Length = 515
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 475 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 503
>gi|195619482|gb|ACG31571.1| hypothetical protein [Zea mays]
Length = 288
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 254 CKHPYHSECINQWLQLNKVCPMC 276
>gi|395514395|ref|XP_003761403.1| PREDICTED: RING finger protein 38 [Sarcophilus harrisii]
Length = 224
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 184 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 212
>gi|348516947|ref|XP_003445998.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oreochromis
niloticus]
Length = 675
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVL 39
C HEYH+ CI W + CPIC + ++
Sbjct: 639 CSHEYHVHCIDRWLSENSTCPICRRAVLV 667
>gi|326480029|gb|EGE04039.1| hypothetical protein TEQG_03073 [Trichophyton equinum CBS 127.97]
Length = 329
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ VT+C+H +H +C+ W +R + CPIC
Sbjct: 292 WVVTNCQHAFHKECLGTWLERGQNCPIC 319
>gi|294950509|ref|XP_002786665.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
gi|239900957|gb|EER18461.1| ring finger protein, putative [Perkinsus marinus ATCC 50983]
Length = 408
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C H +H CI EW +R+ +CPIC
Sbjct: 362 LRVLPCSHVFHANCIDEWLRRNTDCPIC 389
>gi|85857156|dbj|BAE78584.1| anaphase-promoting complex subunit apc11 [Carassius auratus]
Length = 88
Score = 39.7 bits (91), Expect = 2.1, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 11 CKHEYHLQCILEW---SQRSKECPICWQQFVLKE 41
C H +H+ CIL+W Q ++CP+C Q++ KE
Sbjct: 51 CSHCFHMHCILKWLNSQQVQQQCPMCRQEWKFKE 84
>gi|388857438|emb|CCF48946.1| uncharacterized protein [Ustilago hordei]
Length = 875
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ + C H +H +CI W +R+K CP+C
Sbjct: 809 MMSINKCCHAFHAECIKTWFKRAKTCPLC 837
>gi|350579371|ref|XP_003480597.1| PREDICTED: RING finger protein 38 isoform 2 [Sus scrofa]
Length = 466
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 426 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 454
>gi|297726195|ref|NP_001175461.1| Os08g0241400 [Oryza sativa Japonica Group]
gi|40253261|dbj|BAD05399.1| DNA binding zinc finger protein-like [Oryza sativa Japonica Group]
gi|40253630|dbj|BAD05574.1| DNA binding zinc finger protein-like [Oryza sativa Japonica Group]
gi|125602674|gb|EAZ41999.1| hypothetical protein OsJ_26548 [Oryza sativa Japonica Group]
gi|255678273|dbj|BAH94189.1| Os08g0241400 [Oryza sativa Japonica Group]
Length = 349
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+CKH YHL CI +W ++ CPIC
Sbjct: 317 ACKHYYHLACIQQWLRQKNWCPIC 340
>gi|413934715|gb|AFW69266.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 53
Score = 39.7 bits (91), Expect = 2.1, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+H+YH++CI EW ++ CPIC
Sbjct: 17 CEHQYHVRCIHEWLKQKNWCPIC 39
>gi|212722708|ref|NP_001131853.1| uncharacterized protein LOC100193231 [Zea mays]
gi|194692728|gb|ACF80448.1| unknown [Zea mays]
gi|413925726|gb|AFW65658.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 287
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 253 CKHPYHSECINQWLQLNKVCPMC 275
>gi|413949441|gb|AFW82090.1| hypothetical protein ZEAMMB73_048873, partial [Zea mays]
Length = 160
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 39 LKEPACQELLAAIESERLSKSRPIASAAPVTFPE--DFDNGPDGTYFDYDDMEARIMQHL 96
+K+P QELL A+E ER +S P + A P DF+ P G D ++E RI+QHL
Sbjct: 1 MKDPMSQELLEAVEQERNIRSNPSRNTAVFHHPMLGDFEI-PIGA--DDAELEERIIQHL 57
Query: 97 AA 98
AA
Sbjct: 58 AA 59
>gi|118386809|ref|XP_001026522.1| hypothetical protein TTHERM_00328580 [Tetrahymena thermophila]
gi|89308289|gb|EAS06277.1| hypothetical protein TTHERM_00328580 [Tetrahymena thermophila
SB210]
Length = 876
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQF 37
T C H +H QC EW ++ ECP+C + F
Sbjct: 551 TICDHSFHAQCFQEWINKNDECPLCRESF 579
>gi|348575005|ref|XP_003473280.1| PREDICTED: RING finger protein 44-like [Cavia porcellus]
Length = 432
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|291407877|ref|XP_002720173.1| PREDICTED: ring finger protein 113A [Oryctolagus cuniculus]
Length = 344
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT C+H + +C L+ + + C IC QQ +EL+A +L K R A
Sbjct: 275 VTKCRHYFCEKCALQHFRTTPRCYICDQQTNGVFNPAKELIA-----KLEKLRGSAGDGA 329
Query: 68 VTFPEDFDNGP 78
FPED D GP
Sbjct: 330 SDFPEDSDEGP 340
>gi|449545040|gb|EMD36012.1| hypothetical protein CERSUDRAFT_96236 [Ceriporiopsis
subvermispora B]
Length = 360
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 21/28 (75%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQ 35
+ C HE+ +C+L W+++S++CP+C Q
Sbjct: 59 IPKCSHEFCFECLLVWTEQSRKCPLCTQ 86
>gi|356577483|ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
Length = 211
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ Q+ CKH +H +CI W Q + CP+C
Sbjct: 121 VLQIPYCKHVFHFECIHHWLQSNSTCPLC 149
>gi|449280626|gb|EMC87872.1| RING finger protein 38, partial [Columba livia]
Length = 461
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 421 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 449
>gi|395816981|ref|XP_003781957.1| PREDICTED: RING finger protein 44 isoform 1 [Otolemur garnettii]
Length = 432
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCSHEFHTKCVDKWLKANRTCPIC 420
>gi|291382971|ref|XP_002707959.1| PREDICTED: ring finger protein 38 [Oryctolagus cuniculus]
Length = 560
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 520 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 548
>gi|242052031|ref|XP_002455161.1| hypothetical protein SORBIDRAFT_03g005270 [Sorghum bicolor]
gi|241927136|gb|EES00281.1| hypothetical protein SORBIDRAFT_03g005270 [Sorghum bicolor]
Length = 515
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ + C+H++H CI +W Q CP+C
Sbjct: 482 MLGILKCRHDFHADCIKKWLQTKNSCPVC 510
>gi|56749656|sp|Q8BI21.1|RNF38_MOUSE RecName: Full=RING finger protein 38
gi|26325586|dbj|BAC26547.1| unnamed protein product [Mus musculus]
Length = 518
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 478 LLRVLPCNHEFHAKCVDKWLKGNRTCPIC 506
>gi|37577179|ref|NP_919310.1| RING finger protein 38 isoform 3 [Homo sapiens]
gi|297270602|ref|XP_002800139.1| PREDICTED: RING finger protein 38 isoform 4 [Macaca mulatta]
gi|297684043|ref|XP_002819667.1| PREDICTED: RING finger protein 38 isoform 2 [Pongo abelii]
gi|397519532|ref|XP_003829912.1| PREDICTED: RING finger protein 38 isoform 3 [Pan paniscus]
gi|426361763|ref|XP_004048069.1| PREDICTED: RING finger protein 38 isoform 2 [Gorilla gorilla
gorilla]
gi|54673576|gb|AAH33786.2| Ring finger protein 38 [Homo sapiens]
gi|117646890|emb|CAL37560.1| hypothetical protein [synthetic construct]
Length = 465
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 425 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
>gi|242076444|ref|XP_002448158.1| hypothetical protein SORBIDRAFT_06g022310 [Sorghum bicolor]
gi|241939341|gb|EES12486.1| hypothetical protein SORBIDRAFT_06g022310 [Sorghum bicolor]
Length = 725
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H++H +CI EW +R K CP+C
Sbjct: 698 CFHKFHKECIDEWLKRKKLCPVC 720
>gi|224053761|ref|XP_002297966.1| predicted protein [Populus trichocarpa]
gi|222845224|gb|EEE82771.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ Q+ SCKH +H+ CI W + CP+C
Sbjct: 165 VLQIPSCKHVFHIDCIHHWLHSNSTCPLC 193
>gi|402896963|ref|XP_003911547.1| PREDICTED: RING finger protein 38 isoform 1 [Papio anubis]
Length = 586
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 546 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 574
>gi|395755323|ref|XP_002832944.2| PREDICTED: RING finger protein 44, partial [Pongo abelii]
Length = 344
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 304 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 332
>gi|332831910|ref|XP_003312132.1| PREDICTED: RING finger protein 38 isoform 5 [Pan troglodytes]
Length = 465
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 425 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
>gi|332831908|ref|XP_003312131.1| PREDICTED: RING finger protein 38 isoform 4 [Pan troglodytes]
Length = 465
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 425 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
>gi|410918361|ref|XP_003972654.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 467
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 432 LLRVLPCSHEFHAKCVDKWLKANRTCPIC 460
>gi|242088723|ref|XP_002440194.1| hypothetical protein SORBIDRAFT_09g027550 [Sorghum bicolor]
gi|241945479|gb|EES18624.1| hypothetical protein SORBIDRAFT_09g027550 [Sorghum bicolor]
Length = 376
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
SC H YH+ CI +W R CP+C
Sbjct: 346 SCGHTYHVHCIKQWLSRKNACPVC 369
>gi|145489426|ref|XP_001430715.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397815|emb|CAK63317.1| unnamed protein product [Paramecium tetraurelia]
Length = 506
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 1 MQFCLFQVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
M+ C VT C H +H QC+ W Q+ + CP C +F
Sbjct: 407 MKLC--SVTPCFHIFHFQCLSSWLQKQRNCPFCRNEF 441
>gi|395328086|gb|EJF60481.1| hypothetical protein DICSQDRAFT_137571 [Dichomitus squalens
LYAD-421 SS1]
Length = 920
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPV 68
C H +H QC+ W +R + CP C ++ VL A A + +RP AAPV
Sbjct: 374 CGHIFHFQCLRSWLERQQSCPTC-RRTVLDNNATPHANQAPGQGQGRAARPRPGAAPV 430
>gi|351708433|gb|EHB11352.1| RING finger protein 44 [Heterocephalus glaber]
Length = 437
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 397 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 425
>gi|296412639|ref|XP_002836030.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629830|emb|CAZ80187.1| unnamed protein product [Tuber melanosporum]
Length = 291
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
CKH YH QC+ W + CPIC ++P
Sbjct: 199 CKHCYHFQCVSRWLEEHDTCPICRHPITPEDP 230
>gi|145340658|ref|XP_001415438.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575661|gb|ABO93730.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 143
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ ++T C+H +H+ CI W QR K CP C
Sbjct: 110 IVRLTRCEHTFHIDCIAPWLQRHKTCPKC 138
>gi|390458125|ref|XP_003732059.1| PREDICTED: RING finger protein 38 isoform 2 [Callithrix jacchus]
gi|403306614|ref|XP_003943820.1| PREDICTED: RING finger protein 38 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 465
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 425 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
>gi|145489568|ref|XP_001430786.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397886|emb|CAK63388.1| unnamed protein product [Paramecium tetraurelia]
Length = 320
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+T C H++H C++ W Q K+CP+C QF
Sbjct: 291 LTLCSHKFHESCLISWLQVKKQCPVCRHQF 320
>gi|440290038|gb|ELP83492.1| hypothetical protein EIN_377170 [Entamoeba invadens IP1]
Length = 321
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V SC H++H CI +W RS CPIC
Sbjct: 272 VLSCNHKFHKNCITDWFVRSDRCPIC 297
>gi|194703322|gb|ACF85745.1| unknown [Zea mays]
gi|413939275|gb|AFW73826.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 439
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLK-EPACQELLAAIESE 54
C H +HL+CI W CP+C + + P C ++ +ESE
Sbjct: 142 CSHAFHLECIDTWLLSHSTCPLCRRSLLADLSPTCSPVVMVLESE 186
>gi|326489907|dbj|BAJ94027.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 717
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H++H +CI EW +R K CP+C
Sbjct: 688 CFHKFHKECIDEWLRRKKLCPVC 710
>gi|255558630|ref|XP_002520340.1| ring finger protein, putative [Ricinus communis]
gi|223540559|gb|EEF42126.1| ring finger protein, putative [Ricinus communis]
Length = 213
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L + C+H YH +CI+ W Q K CPIC
Sbjct: 172 LVSLLPCQHPYHSECIINWLQVKKICPIC 200
>gi|302654229|ref|XP_003018923.1| hypothetical protein TRV_07055 [Trichophyton verrucosum HKI 0517]
gi|291182611|gb|EFE38278.1| hypothetical protein TRV_07055 [Trichophyton verrucosum HKI 0517]
Length = 799
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ VT C+H +H QC+ W + +CPIC
Sbjct: 765 YMVTPCRHIFHSQCLETWMRLRLQCPIC 792
>gi|403334521|gb|EJY66421.1| Zinc finger protein [Oxytricha trifallax]
Length = 349
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 12 KHEYHLQCILEWSQRSKECPICWQQFVL 39
KH +H CI+EW ++ ECP+C Q+ ++
Sbjct: 319 KHIFHRDCIIEWQKKKNECPLCRQKILI 346
>gi|357123560|ref|XP_003563478.1| PREDICTED: uncharacterized protein LOC100835307 [Brachypodium
distachyon]
Length = 588
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+H+YH+ CI EW ++ CPIC
Sbjct: 552 CEHQYHVCCIKEWLRQKNWCPIC 574
>gi|302496853|ref|XP_003010427.1| hypothetical protein ARB_03128 [Arthroderma benhamiae CBS 112371]
gi|291173970|gb|EFE29787.1| hypothetical protein ARB_03128 [Arthroderma benhamiae CBS 112371]
Length = 799
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ VT C+H +H QC+ W + +CPIC
Sbjct: 765 YMVTPCRHIFHSQCLETWMRLRLQCPIC 792
>gi|209881414|ref|XP_002142145.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209557751|gb|EEA07796.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 413
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+C+H +HLQCI EW + S CP+C
Sbjct: 384 NCQHLFHLQCIQEWLRMSVICPLC 407
>gi|225457493|ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
vinifera]
gi|359491811|ref|XP_003634328.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 2 [Vitis
vinifera]
Length = 369
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
CKH YH CIL W + CP+C + +P
Sbjct: 235 CKHIYHNDCILPWLELHNSCPVCRYELPTDDP 266
>gi|84781711|ref|NP_780410.2| RING finger protein 38 isoform 1 [Mus musculus]
gi|38173739|gb|AAH60730.1| Ring finger protein 38 [Mus musculus]
gi|38566244|gb|AAH62976.1| Ring finger protein 38 [Mus musculus]
Length = 464
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 424 LLRVLPCNHEFHAKCVDKWLKGNRTCPIC 452
>gi|417410939|gb|JAA51933.1| Putative ring finger protein 38, partial [Desmodus rotundus]
Length = 467
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 427 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 455
>gi|357510627|ref|XP_003625602.1| RING finger protein [Medicago truncatula]
gi|355500617|gb|AES81820.1| RING finger protein [Medicago truncatula]
Length = 643
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
+ +C H+YH+ CI +W K CPIC
Sbjct: 606 LKTCGHDYHVSCIKKWLSMKKLCPIC 631
>gi|297834304|ref|XP_002885034.1| hypothetical protein ARALYDRAFT_478848 [Arabidopsis lyrata subsp.
lyrata]
gi|297330874|gb|EFH61293.1| hypothetical protein ARALYDRAFT_478848 [Arabidopsis lyrata subsp.
lyrata]
Length = 192
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
SC H +H++CI W Q + CPIC ++ LK+
Sbjct: 112 SCDHLFHVECIDSWLQSNSTCPICRKRVCLKQ 143
>gi|224094059|ref|XP_002310069.1| predicted protein [Populus trichocarpa]
gi|222852972|gb|EEE90519.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ SCKH YH +CI W + +K CP C
Sbjct: 283 LTLLSCKHSYHSECINNWLKINKVCPFC 310
>gi|148670480|gb|EDL02427.1| ring finger protein 38, isoform CRA_a [Mus musculus]
Length = 465
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 425 LLRVLPCNHEFHAKCVDKWLKGNRTCPIC 453
>gi|4240031|dbj|BAA74802.1| DNA binding zinc finger protein (Pspzf) [Pisum sativum]
Length = 472
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
+ +C H+YH+ CI +W K CPIC
Sbjct: 435 LKTCGHDYHVSCIKKWLSMKKLCPIC 460
>gi|357164642|ref|XP_003580120.1| PREDICTED: uncharacterized protein LOC100837137 [Brachypodium
distachyon]
Length = 728
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H++H +CI EW +R K CP+C
Sbjct: 699 CFHKFHQECIDEWLRRKKLCPVC 721
>gi|327286506|ref|XP_003227971.1| PREDICTED: RING finger protein 44-like [Anolis carolinensis]
Length = 445
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +CI +W + ++ CPIC
Sbjct: 405 LLRVLPCNHEFHAKCIDKWLKANRTCPIC 433
>gi|326480779|gb|EGE04789.1| RING finger ubiquitin ligase [Trichophyton equinum CBS 127.97]
Length = 799
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ VT C+H +H QC+ W + +CPIC
Sbjct: 765 YMVTPCRHIFHSQCLETWMRLRLQCPIC 792
>gi|301628324|ref|XP_002943307.1| PREDICTED: RING finger protein 44-like [Xenopus (Silurana)
tropicalis]
Length = 430
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 390 LLRVLPCNHEFHAKCVDKWLKSNRTCPIC 418
>gi|224067536|ref|XP_002197442.1| PREDICTED: RING finger protein 44 [Taeniopygia guttata]
Length = 442
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 402 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 430
>gi|260784062|ref|XP_002587088.1| hypothetical protein BRAFLDRAFT_285971 [Branchiostoma floridae]
gi|229272225|gb|EEN43099.1| hypothetical protein BRAFLDRAFT_285971 [Branchiostoma floridae]
Length = 158
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 2 QFCLFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESER 55
++ +V C+H++H CIL W ++ CP+C + +P +E A E ER
Sbjct: 90 EYEFVKVMPCQHKFHPSCILPWLSKTNSCPVCRHELPTDDPEYEE--ARKEKER 141
>gi|145511015|ref|XP_001441435.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408685|emb|CAK74038.1| unnamed protein product [Paramecium tetraurelia]
Length = 464
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQ 35
T C H +H QC+L+W+ + CP+C Q
Sbjct: 334 TPCNHYFHEQCLLDWTTKQANCPVCRQ 360
>gi|52545897|emb|CAD39147.2| hypothetical protein [Homo sapiens]
Length = 354
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 314 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 342
>gi|384253104|gb|EIE26579.1| hypothetical protein COCSUDRAFT_39634 [Coccomyxa subellipsoidea
C-169]
Length = 434
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 6 FQVTSCKHEYHLQCILEW-SQRSKECPIC 33
+V CKH +HL+CI +W S R CPIC
Sbjct: 257 LRVLPCKHRFHLECIDQWLSARKPLCPIC 285
>gi|327299792|ref|XP_003234589.1| RING finger ubiquitin ligase [Trichophyton rubrum CBS 118892]
gi|326463483|gb|EGD88936.1| RING finger ubiquitin ligase [Trichophyton rubrum CBS 118892]
Length = 799
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ VT C+H +H QC+ W + +CPIC
Sbjct: 765 YMVTPCRHIFHSQCLETWMRLRLQCPIC 792
>gi|307109038|gb|EFN57277.1| hypothetical protein CHLNCDRAFT_143853 [Chlorella variabilis]
Length = 266
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFV 38
C+H YH CI EW +R+K C IC ++ +
Sbjct: 213 CRHYYHPDCIAEWLKRNKVCCICAKEVI 240
>gi|302760005|ref|XP_002963425.1| hypothetical protein SELMODRAFT_438576 [Selaginella moellendorffii]
gi|300168693|gb|EFJ35296.1| hypothetical protein SELMODRAFT_438576 [Selaginella moellendorffii]
Length = 230
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L Q+ +C+H +H++CI EW + CPIC
Sbjct: 116 LQQLPTCRHTFHVECIDEWLAGNSTCPIC 144
>gi|388511379|gb|AFK43751.1| unknown [Medicago truncatula]
Length = 354
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQ 36
+C H YH QCI +W CP+C QQ
Sbjct: 323 NCDHLYHFQCIQQWVAHKNFCPVCKQQ 349
>gi|326473651|gb|EGD97660.1| RING finger ubiquitin ligase [Trichophyton tonsurans CBS 112818]
Length = 799
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ VT C+H +H QC+ W + +CPIC
Sbjct: 765 YMVTPCRHIFHSQCLETWMRLRLQCPIC 792
>gi|213408997|ref|XP_002175269.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212003316|gb|EEB08976.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 600
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ +T C H YH QC+++W + CP+C
Sbjct: 566 YMLTPCHHLYHRQCLMQWMELHSICPMC 593
>gi|149739190|ref|XP_001504372.1| PREDICTED: RING finger protein 38 isoform 2 [Equus caballus]
Length = 467
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 427 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 455
>gi|10334499|emb|CAC10211.1| hypothetical protein [Cicer arietinum]
Length = 233
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
V SCKH YH +CI W + +K CP+C
Sbjct: 194 LTVLSCKHLYHPECINNWLKINKVCPVC 221
>gi|410949128|ref|XP_003981276.1| PREDICTED: RING finger protein 44 isoform 2 [Felis catus]
Length = 351
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 311 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 339
>gi|403340347|gb|EJY69457.1| RING finger protein [Oxytricha trifallax]
Length = 195
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
C+++ C H++H CI +W ECP+C + K P
Sbjct: 156 CMYKELKCSHQFHTNCITDWLIVKLECPLCKETVNYKRP 194
>gi|402896967|ref|XP_003911549.1| PREDICTED: RING finger protein 38 isoform 3 [Papio anubis]
Length = 502
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 462 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 490
>gi|147854704|emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
Length = 371
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
CKH YH CIL W + CP+C + +P
Sbjct: 237 CKHIYHNDCILPWLELHNSCPVCRYELPTDDP 268
>gi|432878338|ref|XP_004073308.1| PREDICTED: RING finger protein 38-like [Oryzias latipes]
Length = 642
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 602 LLRVLPCSHEFHGKCVDKWLRANRTCPIC 630
>gi|356572425|ref|XP_003554369.1| PREDICTED: uncharacterized protein LOC100803627 [Glycine max]
Length = 549
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
+ +C H+YH+ CI +W K CPIC
Sbjct: 512 LQTCGHDYHVSCIKKWLSMKKLCPIC 537
>gi|350579369|ref|XP_003480596.1| PREDICTED: RING finger protein 38 isoform 1 [Sus scrofa]
Length = 432
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|347965741|ref|XP_321788.3| AGAP001358-PA [Anopheles gambiae str. PEST]
gi|333470373|gb|EAA43207.3| AGAP001358-PA [Anopheles gambiae str. PEST]
Length = 778
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ +V C HE+H +C+ +W + ++ CPIC
Sbjct: 736 ILRVLPCSHEFHAKCVDKWLRSNRTCPIC 764
>gi|224010279|ref|XP_002294097.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970114|gb|EED88452.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 846
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+C H +HL C++ W Q ECP+C + V
Sbjct: 800 VACNHIFHLDCLMPWLQLHNECPLCRSKLV 829
>gi|21536693|gb|AAM61025.1| unknown [Arabidopsis thaliana]
Length = 340
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI W + +K CP+C
Sbjct: 306 CKHSYHSECINNWLKINKVCPVC 328
>gi|118363032|ref|XP_001014819.1| hypothetical protein TTHERM_00049240 [Tetrahymena thermophila]
gi|89296508|gb|EAR94496.1| hypothetical protein TTHERM_00049240 [Tetrahymena thermophila
SB210]
Length = 516
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQ 35
+ C+H +H C+ EW ++ ECP+C Q
Sbjct: 428 ILKCQHYFHQSCVDEWLKKKMECPVCRQ 455
>gi|157821751|ref|NP_001102128.1| E3 ubiquitin-protein ligase Topors [Rattus norvegicus]
gi|149045629|gb|EDL98629.1| topoisomerase I binding, arginine/serine-rich (predicted) [Rattus
norvegicus]
Length = 1042
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 120 CLHKFCFRCVQEWSKNKAECPLCKQPF 146
>gi|395823842|ref|XP_003785186.1| PREDICTED: RING finger protein 38 isoform 1 [Otolemur garnettii]
gi|395823844|ref|XP_003785187.1| PREDICTED: RING finger protein 38 isoform 2 [Otolemur garnettii]
gi|395823846|ref|XP_003785188.1| PREDICTED: RING finger protein 38 isoform 3 [Otolemur garnettii]
Length = 432
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|348569938|ref|XP_003470754.1| PREDICTED: RING finger protein 38-like [Cavia porcellus]
Length = 513
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 473 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 501
>gi|327277233|ref|XP_003223370.1| PREDICTED: RING finger protein 38-like [Anolis carolinensis]
Length = 486
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 446 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 474
>gi|403306616|ref|XP_003943821.1| PREDICTED: RING finger protein 38 isoform 3 [Saimiri boliviensis
boliviensis]
gi|403306618|ref|XP_003943822.1| PREDICTED: RING finger protein 38 isoform 4 [Saimiri boliviensis
boliviensis]
gi|403306620|ref|XP_003943823.1| PREDICTED: RING finger protein 38 isoform 5 [Saimiri boliviensis
boliviensis]
Length = 432
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|225637509|ref|NP_001139497.1| RING finger protein 44 isoform 1 [Mus musculus]
Length = 432
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|255552618|ref|XP_002517352.1| zinc finger protein, putative [Ricinus communis]
gi|223543363|gb|EEF44894.1| zinc finger protein, putative [Ricinus communis]
Length = 200
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH +H QC+ EW ++ CPIC
Sbjct: 95 CKHSFHAQCVDEWLLKTPICPIC 117
>gi|164661381|ref|XP_001731813.1| hypothetical protein MGL_1081 [Malassezia globosa CBS 7966]
gi|159105714|gb|EDP44599.1| hypothetical protein MGL_1081 [Malassezia globosa CBS 7966]
Length = 391
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQ 45
C H +H +C+ W +R + CP C + + PA Q
Sbjct: 98 CSHVFHFRCLHSWLERQQNCPTCRRDVLAPTPAAQ 132
>gi|37577177|ref|NP_919309.1| RING finger protein 38 isoform 2 [Homo sapiens]
gi|37577181|ref|NP_919311.1| RING finger protein 38 isoform 2 [Homo sapiens]
gi|37577185|ref|NP_919313.1| RING finger protein 38 isoform 2 [Homo sapiens]
gi|297270598|ref|XP_002800137.1| PREDICTED: RING finger protein 38 isoform 2 [Macaca mulatta]
gi|297270604|ref|XP_002800140.1| PREDICTED: RING finger protein 38 isoform 5 [Macaca mulatta]
gi|297270606|ref|XP_002800141.1| PREDICTED: RING finger protein 38 isoform 6 [Macaca mulatta]
gi|297270608|ref|XP_001082059.2| PREDICTED: RING finger protein 38 isoform 1 [Macaca mulatta]
gi|297270610|ref|XP_002800142.1| PREDICTED: RING finger protein 38 isoform 7 [Macaca mulatta]
gi|297684045|ref|XP_002819668.1| PREDICTED: RING finger protein 38 isoform 3 [Pongo abelii]
gi|297684047|ref|XP_002819669.1| PREDICTED: RING finger protein 38 isoform 4 [Pongo abelii]
gi|332228411|ref|XP_003263383.1| PREDICTED: RING finger protein 38 isoform 4 [Nomascus leucogenys]
gi|397519530|ref|XP_003829911.1| PREDICTED: RING finger protein 38 isoform 2 [Pan paniscus]
gi|402896965|ref|XP_003911548.1| PREDICTED: RING finger protein 38 isoform 2 [Papio anubis]
gi|402896969|ref|XP_003911550.1| PREDICTED: RING finger protein 38 isoform 4 [Papio anubis]
gi|402896971|ref|XP_003911551.1| PREDICTED: RING finger protein 38 isoform 5 [Papio anubis]
gi|426361765|ref|XP_004048070.1| PREDICTED: RING finger protein 38 isoform 3 [Gorilla gorilla
gorilla]
gi|426361767|ref|XP_004048071.1| PREDICTED: RING finger protein 38 isoform 4 [Gorilla gorilla
gorilla]
gi|426361769|ref|XP_004048072.1| PREDICTED: RING finger protein 38 isoform 5 [Gorilla gorilla
gorilla]
gi|21666412|gb|AAM73697.1|AF394047_1 RING finger protein 38 [Homo sapiens]
gi|67968671|dbj|BAE00694.1| unnamed protein product [Macaca fascicularis]
gi|119578709|gb|EAW58305.1| ring finger protein 38 [Homo sapiens]
gi|123997119|gb|ABM86161.1| ring finger protein 38 [synthetic construct]
gi|157928809|gb|ABW03690.1| ring finger protein 38 [synthetic construct]
gi|380785195|gb|AFE64473.1| RING finger protein 38 isoform 1 [Macaca mulatta]
gi|380785197|gb|AFE64474.1| RING finger protein 38 isoform 1 [Macaca mulatta]
Length = 432
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|351711776|gb|EHB14695.1| RING finger protein 38 [Heterocephalus glaber]
Length = 428
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 388 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 416
>gi|229594219|ref|XP_001025113.3| hypothetical protein TTHERM_00469170 [Tetrahymena thermophila]
gi|225566997|gb|EAS04868.3| hypothetical protein TTHERM_00469170 [Tetrahymena thermophila
SB210]
Length = 367
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
++ CKH YH CI +W + K CP+C +QF+
Sbjct: 335 ELNPCKHFYHPDCINQWLKNEKNCPVC-KQFI 365
>gi|291190418|ref|NP_001167259.1| E3 ubiquitin-protein ligase RNF8 [Salmo salar]
gi|223648922|gb|ACN11219.1| E3 ubiquitin-protein ligase RNF8 [Salmo salar]
Length = 475
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFV 38
+C H + L CI EW +R ECPIC Q +
Sbjct: 406 NCAHSFCLHCISEWRKRKDECPICRQAIL 434
>gi|226500884|ref|NP_001149313.1| RING-H2 finger protein ATL2C [Zea mays]
gi|195624254|gb|ACG33957.1| RING-H2 finger protein ATL2C [Zea mays]
Length = 433
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLK-EPACQELLAAIESE 54
C H +HL+CI W CP+C + + P C ++ +ESE
Sbjct: 138 CSHAFHLECIDTWLLSHSTCPLCRRSLLADLSPTCSPVVMVLESE 182
>gi|15231830|ref|NP_188049.1| putative RING-H2 finger protein ATL61 [Arabidopsis thaliana]
gi|68565311|sp|Q9LUL6.1|ATL61_ARATH RecName: Full=Putative RING-H2 finger protein ATL61
gi|9279580|dbj|BAB01038.1| unnamed protein product [Arabidopsis thaliana]
gi|332641980|gb|AEE75501.1| putative RING-H2 finger protein ATL61 [Arabidopsis thaliana]
Length = 204
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
SC H +H++CI W Q + CPIC ++ LK+
Sbjct: 106 SCDHWFHVECIDSWLQSNSTCPICRKRVCLKQ 137
>gi|431892704|gb|ELK03137.1| RING finger protein 44 [Pteropus alecto]
Length = 351
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 311 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 339
>gi|73971363|ref|XP_866889.1| PREDICTED: RING finger protein 38 isoform 5 [Canis lupus
familiaris]
gi|410978605|ref|XP_003995680.1| PREDICTED: RING finger protein 38 isoform 1 [Felis catus]
gi|410978607|ref|XP_003995681.1| PREDICTED: RING finger protein 38 isoform 2 [Felis catus]
gi|410978609|ref|XP_003995682.1| PREDICTED: RING finger protein 38 isoform 3 [Felis catus]
Length = 432
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|89272082|emb|CAJ81331.1| ring finger protein 38 [Xenopus (Silurana) tropicalis]
Length = 432
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|354471969|ref|XP_003498213.1| PREDICTED: RING finger protein 44 isoform 1 [Cricetulus griseus]
Length = 432
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|398013344|ref|XP_003859864.1| hypothetical protein, conserved [Leishmania donovani]
gi|322498082|emb|CBZ33157.1| hypothetical protein, conserved [Leishmania donovani]
Length = 211
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+ C+H +HLQC+ W QRS CP+C+ V E L+++ + R + + +AP
Sbjct: 95 LLKCEHGFHLQCLESWRQRSSMCPMCFAPVVGDE---GRLMSSCDVRRRRRMQLKPPSAP 151
Query: 68 VTFPE 72
PE
Sbjct: 152 HHAPE 156
>gi|315052904|ref|XP_003175826.1| hypothetical protein MGYG_03346 [Arthroderma gypseum CBS 118893]
gi|311341141|gb|EFR00344.1| hypothetical protein MGYG_03346 [Arthroderma gypseum CBS 118893]
Length = 801
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ VT C+H +H QC+ W + +CPIC
Sbjct: 767 YMVTPCRHIFHSQCLETWMRLRLQCPIC 794
>gi|148909153|gb|ABR17677.1| unknown [Picea sitchensis]
Length = 451
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH CIL W ++ CP+C
Sbjct: 250 CKHMYHSVCILPWLEQHNSCPVC 272
>gi|77736109|ref|NP_001029753.1| RING finger protein 38 [Bos taurus]
gi|426220204|ref|XP_004004306.1| PREDICTED: RING finger protein 38 isoform 1 [Ovis aries]
gi|426220206|ref|XP_004004307.1| PREDICTED: RING finger protein 38 isoform 2 [Ovis aries]
gi|74355024|gb|AAI02725.1| Ring finger protein 38 [Bos taurus]
gi|296484700|tpg|DAA26815.1| TPA: ring finger protein 38 [Bos taurus]
Length = 432
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|354471971|ref|XP_003498214.1| PREDICTED: RING finger protein 44 isoform 2 [Cricetulus griseus]
Length = 433
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 393 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 421
>gi|332831902|ref|XP_003312128.1| PREDICTED: RING finger protein 38 isoform 1 [Pan troglodytes]
gi|332831904|ref|XP_528602.3| PREDICTED: RING finger protein 38 isoform 6 [Pan troglodytes]
gi|332831906|ref|XP_003312130.1| PREDICTED: RING finger protein 38 isoform 3 [Pan troglodytes]
gi|410042607|ref|XP_003951473.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
gi|410042610|ref|XP_003951474.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
gi|410042612|ref|XP_003951475.1| PREDICTED: RING finger protein 38 [Pan troglodytes]
gi|343961087|dbj|BAK62133.1| hypothetical protein [Pan troglodytes]
gi|343961287|dbj|BAK62233.1| hypothetical protein [Pan troglodytes]
Length = 432
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|428169892|gb|EKX38822.1| hypothetical protein GUITHDRAFT_115148 [Guillardia theta CCMP2712]
Length = 248
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPIC 33
++ C H +H C++EW +R CPIC
Sbjct: 192 KMMPCGHPFHYDCLMEWLERKNSCPIC 218
>gi|71896429|ref|NP_001025505.1| ring finger protein 38 [Xenopus (Silurana) tropicalis]
Length = 464
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 424 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 452
>gi|242078639|ref|XP_002444088.1| hypothetical protein SORBIDRAFT_07g007520 [Sorghum bicolor]
gi|241940438|gb|EES13583.1| hypothetical protein SORBIDRAFT_07g007520 [Sorghum bicolor]
Length = 358
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+CKH YH CI +W Q+ CPIC
Sbjct: 326 ACKHYYHTTCIQQWLQQKNWCPIC 349
>gi|146083135|ref|XP_001464659.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134068753|emb|CAM59687.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 211
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+ C+H +HLQC+ W QRS CP+C+ V E L+++ + R + + +AP
Sbjct: 95 LLKCEHGFHLQCLESWRQRSSMCPMCFAPVVGDE---GRLMSSCDVRRRRRMQLKPPSAP 151
Query: 68 VTFPE 72
PE
Sbjct: 152 HHAPE 156
>gi|37360244|dbj|BAC98100.1| mKIAA1100 protein [Mus musculus]
Length = 384
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 344 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 372
>gi|297806609|ref|XP_002871188.1| hypothetical protein ARALYDRAFT_908508 [Arabidopsis lyrata subsp.
lyrata]
gi|297317025|gb|EFH47447.1| hypothetical protein ARALYDRAFT_908508 [Arabidopsis lyrata subsp.
lyrata]
Length = 191
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
++ C H +H++CI W ++S++CPIC
Sbjct: 144 LSKCHHSFHMKCIFSWLRQSQDCPIC 169
>gi|296815802|ref|XP_002848238.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238841263|gb|EEQ30925.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 802
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ VT C+H +H QC+ W + +CPIC
Sbjct: 768 YMVTPCRHIFHSQCLETWMRLRLQCPIC 795
>gi|194379472|dbj|BAG63702.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 311 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 339
>gi|410914174|ref|XP_003970563.1| PREDICTED: RING finger protein 44-like [Takifugu rubripes]
Length = 440
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 400 LLRVLPCNHEFHAKCVDKWLKTNRTCPIC 428
>gi|395505163|ref|XP_003756914.1| PREDICTED: RING finger protein 44 isoform 1 [Sarcophilus harrisii]
Length = 438
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 398 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 426
>gi|255934058|ref|XP_002558310.1| Pc12g15070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582929|emb|CAP81134.1| Pc12g15070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 808
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L+ VT C+H +H C+ W + +CPIC
Sbjct: 773 LYMVTPCRHIFHTACLESWMRLRLQCPIC 801
>gi|115495409|ref|NP_001070092.1| RING finger protein 44 [Danio rerio]
gi|123908298|sp|Q08CG8.1|RNF44_DANRE RecName: Full=RING finger protein 44
gi|115313066|gb|AAI24247.1| Zgc:153103 [Danio rerio]
Length = 448
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 408 LLRVLPCNHEFHAKCVDKWLKTNRTCPIC 436
>gi|356561816|ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 369
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
CKH YH CIL W + CP+C + +P
Sbjct: 221 CKHIYHADCILPWLELHNSCPVCRYELPTDDP 252
>gi|26251937|gb|AAH40797.1| Topoisomerase I binding, arginine/serine-rich [Mus musculus]
Length = 1033
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 120 CLHKFCFRCVQEWSKNKAECPLCKQPF 146
>gi|403290098|ref|XP_003936169.1| PREDICTED: RING finger protein 44 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 348
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 308 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 336
>gi|255573615|ref|XP_002527730.1| RING-H2 finger protein ATL2J, putative [Ricinus communis]
gi|223532871|gb|EEF34643.1| RING-H2 finger protein ATL2J, putative [Ricinus communis]
Length = 200
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
Q++SCKH +H CI W CP+C +K+P
Sbjct: 124 QLSSCKHSFHASCIDMWLNSHSNCPVCRASVPVKKP 159
>gi|145529341|ref|XP_001450459.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418070|emb|CAK83062.1| unnamed protein product [Paramecium tetraurelia]
Length = 90
Score = 39.3 bits (90), Expect = 2.8, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQ 36
Q+ CKH +H C+ +W + +CP+C QQ
Sbjct: 60 QIRECKHTFHQLCLQKWYNINNKCPLCRQQ 89
>gi|18402411|ref|NP_566651.1| E3 ubiquitin ligase BIG BROTHER-like protein [Arabidopsis thaliana]
gi|75335434|sp|Q9LT17.1|BBR_ARATH RecName: Full=E3 ubiquitin ligase BIG BROTHER-related; Short=AtBBR
gi|11994203|dbj|BAB01306.1| unnamed protein product [Arabidopsis thaliana]
gi|15010578|gb|AAK73948.1| AT3g19910/MPN9_15 [Arabidopsis thaliana]
gi|15028363|gb|AAK76658.1| unknown protein [Arabidopsis thaliana]
gi|19310707|gb|AAL85084.1| unknown protein [Arabidopsis thaliana]
gi|332642786|gb|AEE76307.1| E3 ubiquitin ligase BIG BROTHER-like protein [Arabidopsis thaliana]
Length = 340
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI W + +K CP+C
Sbjct: 306 CKHSYHSECINNWLKINKVCPVC 328
>gi|413918895|gb|AFW58827.1| putative RING zinc finger domain superfamily protein [Zea mays]
gi|413918896|gb|AFW58828.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 445
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H++H +CI EW +R K CP+C
Sbjct: 418 CFHKFHKECIDEWLRRKKLCPVC 440
>gi|354502030|ref|XP_003513090.1| PREDICTED: RING finger protein 38 [Cricetulus griseus]
Length = 465
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 425 LLRVLPCNHEFHAKCVDKWLKGNRTCPIC 453
>gi|297830656|ref|XP_002883210.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329050|gb|EFH59469.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI W + +K CP+C
Sbjct: 303 CKHSYHSECINNWLKINKVCPVC 325
>gi|425768245|gb|EKV06775.1| putative RING finger protein [Penicillium digitatum Pd1]
Length = 792
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L+ VT C+H +H C+ W + +CPIC
Sbjct: 757 LYMVTPCRHIFHTACLESWMRLRLQCPIC 785
>gi|29336062|ref|NP_598858.2| E3 ubiquitin-protein ligase Topors [Mus musculus]
gi|81895461|sp|Q80Z37.1|TOPRS_MOUSE RecName: Full=E3 ubiquitin-protein ligase Topors; AltName:
Full=SUMO1-protein E3 ligase Topors; AltName:
Full=Topoisomerase I-binding RING finger protein;
AltName: Full=Topoisomerase I-binding
arginine/serine-rich protein; AltName: Full=Tumor
suppressor p53-binding protein 3; Short=p53-binding
protein 3; Short=p53BP3
gi|28849251|dbj|BAC65157.1| topoisomerase 1-binding RING finger protein [Mus musculus]
gi|148673497|gb|EDL05444.1| topoisomerase I binding, arginine/serine-rich [Mus musculus]
Length = 1033
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 120 CLHKFCFRCVQEWSKNKAECPLCKQPF 146
>gi|402873507|ref|XP_003900615.1| PREDICTED: RING finger protein 44 isoform 2 [Papio anubis]
Length = 351
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 311 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 339
>gi|356523640|ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
Length = 209
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L Q+ C H +H+ CI W Q + CP+C
Sbjct: 121 LLQIPYCNHVFHISCICNWLQSNSTCPLC 149
>gi|335283091|ref|XP_003354234.1| PREDICTED: RING finger protein 44 isoform 2 [Sus scrofa]
Length = 351
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 311 LLRVLPCNHEFHTKCVDKWLKANRTCPIC 339
>gi|212722096|ref|NP_001132824.1| uncharacterized LOC100194314 [Zea mays]
gi|194695496|gb|ACF81832.1| unknown [Zea mays]
gi|195642154|gb|ACG40545.1| zinc finger, C3HC4 type family protein [Zea mays]
gi|414585589|tpg|DAA36160.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414585590|tpg|DAA36161.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 372
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+CKH YHL CI W ++ CPIC
Sbjct: 341 ACKHYYHLSCIDHWLRQKNWCPIC 364
>gi|193787520|dbj|BAG52726.1| unnamed protein product [Homo sapiens]
Length = 439
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 399 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 427
>gi|15919933|dbj|BAB69457.1| p53-binding protein-3 [Mus musculus]
Length = 1033
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 120 CLHKFCFRCVQEWSKNKAECPLCKQPF 146
>gi|47211404|emb|CAF94220.1| unnamed protein product [Tetraodon nigroviridis]
Length = 428
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 388 LLRVLPCNHEFHAKCVDKWLKTNRTCPIC 416
>gi|145536492|ref|XP_001453968.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421712|emb|CAK86571.1| unnamed protein product [Paramecium tetraurelia]
Length = 382
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 9 TSCKHEYHLQCILEWSQRS-KECPICWQQFVLKE 41
T C H +H CI EW Q++ KECP+C +K+
Sbjct: 340 THCHHNFHSLCIREWLQKNKKECPVCRSNLAIKD 373
>gi|254570319|ref|XP_002492269.1| Golgi-localized RING-finger ubiquitin ligase (E3), involved in
ubiquitinating and sorting membrane p [Komagataella
pastoris GS115]
gi|238032067|emb|CAY69989.1| Golgi-localized RING-finger ubiquitin ligase (E3), involved in
ubiquitinating and sorting membrane p [Komagataella
pastoris GS115]
Length = 771
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
++ VT C+H +H +C+ W Q +CP+C
Sbjct: 736 VYMVTPCRHLFHSECLESWMQYKLQCPVC 764
>gi|19745198|ref|NP_604462.1| RING finger protein 38 [Rattus norvegicus]
gi|19423292|gb|AAL88459.1|AF480444_1 RING finger protein OIP1 [Rattus norvegicus]
Length = 432
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKGNRTCPIC 420
>gi|225637511|ref|NP_001139498.1| RING finger protein 44 isoform 2 [Mus musculus]
gi|123784632|sp|Q3UHJ8.1|RNF44_MOUSE RecName: Full=RING finger protein 44
gi|74181211|dbj|BAE27859.1| unnamed protein product [Mus musculus]
Length = 407
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 367 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 395
>gi|413923436|gb|AFW63368.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 218
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+C+H +HL+CI W Q+ CPIC
Sbjct: 124 TCQHNFHLECIDVWLQKQTTCPIC 147
>gi|335296431|ref|XP_003130738.2| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Sus
scrofa]
Length = 1046
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|397519534|ref|XP_003829913.1| PREDICTED: RING finger protein 38 isoform 4 [Pan paniscus]
gi|426361771|ref|XP_004048073.1| PREDICTED: RING finger protein 38 isoform 6 [Gorilla gorilla
gorilla]
Length = 439
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 399 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 427
>gi|53733396|gb|AAH83548.1| Rnf38 protein [Rattus norvegicus]
gi|149045789|gb|EDL98789.1| ring finger protein 38, isoform CRA_a [Rattus norvegicus]
gi|149045790|gb|EDL98790.1| ring finger protein 38, isoform CRA_a [Rattus norvegicus]
Length = 432
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKGNRTCPIC 420
>gi|326473507|gb|EGD97516.1| PHD and RING finger domain-containing protein [Trichophyton
tonsurans CBS 112818]
Length = 618
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIAS 64
+ + C H H +C+ W +R+ CPIC Q F + E + AI S + +A
Sbjct: 43 IAHLLPCGHNLHNECLKPWVERANSCPICRQNFNVVELVTKVGGPAISSYVVEDRIQVAD 102
Query: 65 AAPVTFPEDF 74
P +D
Sbjct: 103 IDPSMLGDDL 112
>gi|401404500|ref|XP_003881738.1| Os05g0488800 protein, related [Neospora caninum Liverpool]
gi|325116151|emb|CBZ51705.1| Os05g0488800 protein, related [Neospora caninum Liverpool]
Length = 667
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAA 66
+ C H +H QCI+ W ++ CP+C + + A + A + + S +A+AA
Sbjct: 327 SQCSHIFHRQCIIPWLEQHNSCPVCRFELPTDDAAYNQRRAELRNRVRSTLSSVAAAA 384
>gi|398015762|ref|XP_003861070.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499294|emb|CBZ34368.1| hypothetical protein, conserved [Leishmania donovani]
Length = 398
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPA 43
++ +C H +H CI +W ++K CPIC + VL +PA
Sbjct: 358 VKLLNCPHAFHKPCINQWLTQNKTCPICKME-VLPKPA 394
>gi|242096884|ref|XP_002438932.1| hypothetical protein SORBIDRAFT_10g028510 [Sorghum bicolor]
gi|241917155|gb|EER90299.1| hypothetical protein SORBIDRAFT_10g028510 [Sorghum bicolor]
Length = 590
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+H+YH+ CI EW ++ CPIC
Sbjct: 554 CEHQYHVCCIHEWLRQKNWCPIC 576
>gi|157137022|ref|XP_001656980.1| ring finger protein [Aedes aegypti]
gi|108884247|gb|EAT48472.1| AAEL000523-PA [Aedes aegypti]
Length = 559
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ +V C HE+H +C+ +W + ++ CPIC
Sbjct: 517 ILRVLPCSHEFHAKCVDKWLRSNRTCPIC 545
>gi|432879090|ref|XP_004073447.1| PREDICTED: RING finger protein 44-like [Oryzias latipes]
Length = 440
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 400 LLRVLPCNHEFHAKCVDKWLKTNRTCPIC 428
>gi|425770415|gb|EKV08888.1| putative RING finger protein [Penicillium digitatum PHI26]
Length = 806
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L+ VT C+H +H C+ W + +CPIC
Sbjct: 771 LYMVTPCRHIFHTACLESWMRLRLQCPIC 799
>gi|255641525|gb|ACU21036.1| unknown [Glycine max]
Length = 419
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V CKH +H+ CI W ++ CPIC
Sbjct: 135 VPKCKHAFHIDCIDHWLEKHSTCPIC 160
>gi|302497157|ref|XP_003010579.1| hypothetical protein ARB_03280 [Arthroderma benhamiae CBS 112371]
gi|291174122|gb|EFE29939.1| hypothetical protein ARB_03280 [Arthroderma benhamiae CBS 112371]
Length = 641
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE--------PACQELLAAI 51
+ + C H H +C+ W +R+ CPIC Q F + E P C +AA
Sbjct: 43 IAHLLPCGHNLHNECLKPWVERANSCPICRQNFNVVELVTKVGGTPTCSYSIAAF 97
>gi|348516749|ref|XP_003445900.1| PREDICTED: RING finger protein 44-like [Oreochromis niloticus]
Length = 440
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 400 LLRVLPCNHEFHAKCVDKWLKTNRTCPIC 428
>gi|146087538|ref|XP_001465851.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134069951|emb|CAM68281.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 398
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPA 43
++ +C H +H CI +W ++K CPIC + VL +PA
Sbjct: 358 VKLLNCPHAFHKPCINQWLTQNKTCPICKME-VLPKPA 394
>gi|449439501|ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Cucumis sativus]
gi|449439503|ref|XP_004137525.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2
[Cucumis sativus]
gi|449439505|ref|XP_004137526.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 3
[Cucumis sativus]
gi|449503086|ref|XP_004161827.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Cucumis sativus]
gi|449503089|ref|XP_004161828.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2
[Cucumis sativus]
gi|449503091|ref|XP_004161829.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 3
[Cucumis sativus]
Length = 378
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
++ CKH YH CI+ W + CP+C + +P
Sbjct: 238 KLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDP 273
>gi|84781709|ref|NP_001034082.1| RING finger protein 38 isoform 2 [Mus musculus]
gi|74188535|dbj|BAE28022.1| unnamed protein product [Mus musculus]
gi|148670482|gb|EDL02429.1| ring finger protein 38, isoform CRA_c [Mus musculus]
Length = 432
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 392 LLRVLPCNHEFHAKCVDKWLKGNRTCPIC 420
>gi|388511895|gb|AFK44009.1| unknown [Lotus japonicus]
Length = 293
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
CKH YH CI+ W R CP+C Q+
Sbjct: 204 CKHMYHPDCIVPWLVRHNSCPVCRQEL 230
>gi|146181089|ref|XP_001022086.2| zinc finger protein [Tetrahymena thermophila]
gi|146144324|gb|EAS01841.2| zinc finger protein [Tetrahymena thermophila SB210]
Length = 689
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
T C H+YH+ C+L+W + ECP C
Sbjct: 657 TPCDHKYHIPCLLKWMEVKMECPTC 681
>gi|403368989|gb|EJY84332.1| hypothetical protein OXYTRI_17927 [Oxytricha trifallax]
Length = 349
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPIC 33
C+++ C H++H CI EW + ECP+C
Sbjct: 304 CMYKELKCCHQFHSHCIDEWLKVKLECPLC 333
>gi|346321767|gb|EGX91366.1| anaphase promoting complex subunit Apc11, putative [Cordyceps
militaris CM01]
Length = 96
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRS---KECPICWQQF 37
C C H +H+ CI+EW ++ K+CP+C Q F
Sbjct: 45 CALLSGKCGHNFHMHCIMEWIKQETSRKQCPMCRQPF 81
>gi|224081342|ref|XP_002306377.1| predicted protein [Populus trichocarpa]
gi|222855826|gb|EEE93373.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ SCKH YH +CI W + +K CP+C
Sbjct: 151 LTLLSCKHSYHSECINNWLKINKACPVC 178
>gi|115456155|ref|NP_001051678.1| Os03g0812200 [Oryza sativa Japonica Group]
gi|32129334|gb|AAP73861.1| unknown protein [Oryza sativa Japonica Group]
gi|40786589|gb|AAR89864.1| putative ring finger protein [Oryza sativa Japonica Group]
gi|108711712|gb|ABF99507.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113550149|dbj|BAF13592.1| Os03g0812200 [Oryza sativa Japonica Group]
gi|125546172|gb|EAY92311.1| hypothetical protein OsI_14036 [Oryza sativa Indica Group]
gi|125588365|gb|EAZ29029.1| hypothetical protein OsJ_13080 [Oryza sativa Japonica Group]
gi|215695293|dbj|BAG90484.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765742|dbj|BAG87439.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 369
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C+H++H QCIL W + CPIC Q +E
Sbjct: 273 CQHKFHSQCILPWLELHSSCPICRFQLPTEE 303
>gi|47215711|emb|CAG04795.1| unnamed protein product [Tetraodon nigroviridis]
Length = 597
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 557 LLRVLPCSHEFHGKCVDKWLRANRTCPIC 585
>gi|410918018|ref|XP_003972483.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Takifugu
rubripes]
Length = 741
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +CI EWS+ ECP+C Q F
Sbjct: 27 CLHKFCFRCIHEWSKNKAECPLCKQPF 53
>gi|402897214|ref|XP_003911665.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Papio anubis]
Length = 1045
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|326480269|gb|EGE04279.1| PHD and RING finger domain-containing protein [Trichophyton equinum
CBS 127.97]
Length = 618
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIAS 64
+ + C H H +C+ W +R+ CPIC Q F + E + AI S + +A
Sbjct: 43 IAHLLPCGHNLHNECLKPWVERANSCPICRQNFNVVELVTKVGGPAISSYVVEDRIQVAD 102
Query: 65 AAPVTFPEDF 74
P +D
Sbjct: 103 IDPSMLGDDL 112
>gi|226495751|ref|NP_001147253.1| RING-H2 finger protein ATL2M [Zea mays]
gi|195609120|gb|ACG26390.1| RING-H2 finger protein ATL2M [Zea mays]
gi|223945997|gb|ACN27082.1| unknown [Zea mays]
gi|413946146|gb|AFW78795.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 206
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+H +HL C+ W +RS CP+C
Sbjct: 148 CRHRFHLTCLDAWLRRSASCPVC 170
>gi|145546366|ref|XP_001458866.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426688|emb|CAK91469.1| unnamed protein product [Paramecium tetraurelia]
Length = 282
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
C+H YH +CI W + K CPIC Q+ +K P
Sbjct: 238 CQHLYHSKCIKLWLGKEKHCPICKQELEIKMP 269
>gi|4566495|gb|AAD23379.1|AF098300_1 topoisomerase I-binding RS protein [Homo sapiens]
Length = 1045
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|74185187|dbj|BAC31981.2| unnamed protein product [Mus musculus]
Length = 639
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 120 CLHKFCFRCVQEWSKNKAECPLCKQPF 146
>gi|329744626|ref|NP_001179507.2| E3 ubiquitin-protein ligase Topors [Bos taurus]
Length = 1037
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|157867398|ref|XP_001682253.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125706|emb|CAJ03402.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 212
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+ C+H +HLQC+ W QRS CP+C+ V
Sbjct: 96 LLKCEHGFHLQCLESWRQRSSMCPMCFAPVV 126
>gi|74148726|dbj|BAE24298.1| unnamed protein product [Mus musculus]
Length = 559
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 120 CLHKFCFRCVQEWSKNKAECPLCKQPF 146
>gi|395816983|ref|XP_003781958.1| PREDICTED: RING finger protein 44 isoform 2 [Otolemur garnettii]
Length = 351
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 311 LLRVLPCSHEFHTKCVDKWLKANRTCPIC 339
>gi|291383109|ref|XP_002707993.1| PREDICTED: topoisomerase I binding, arginine/serine-rich
[Oryctolagus cuniculus]
Length = 1073
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 155 CLHKFCFRCVQEWSKNKAECPLCKQPF 181
>gi|290978206|ref|XP_002671827.1| predicted protein [Naegleria gruberi]
gi|284085399|gb|EFC39083.1| predicted protein [Naegleria gruberi]
Length = 655
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
F VT C H +H C+ +W + ECP+C
Sbjct: 621 FMVTPCNHVFHTVCLEKWKEYKLECPLC 648
>gi|118384838|ref|XP_001025558.1| zinc finger protein [Tetrahymena thermophila]
gi|89307325|gb|EAS05313.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 833
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
+T C H +H QCI +W ++ K CP C Q+ +E
Sbjct: 404 LTYCNHFFHDQCIKDWLKKDKTCPHCRQKLSQQE 437
>gi|9631449|ref|NP_048268.1| ORF MSV197 tryptophan repeat gene family protein [Melanoplus
sanguinipes entomopoxvirus]
gi|4049802|gb|AAC97762.1| ORF MSV197 tryptophan repeat gene family protein [Melanoplus
sanguinipes entomopoxvirus]
Length = 336
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKECPIC 33
CLF T CKH +H +CI W + CP+C
Sbjct: 289 CLFSKTICKHVFHKKCIDNWLLNNYNCPLC 318
>gi|10437428|dbj|BAB15050.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 292 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 320
>gi|410978422|ref|XP_003995590.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Felis
catus]
Length = 1042
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|302780012|ref|XP_002971781.1| hypothetical protein SELMODRAFT_172324 [Selaginella moellendorffii]
gi|300160913|gb|EFJ27530.1| hypothetical protein SELMODRAFT_172324 [Selaginella moellendorffii]
Length = 264
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L Q+ +C+H +H++CI EW + CPIC
Sbjct: 138 LQQLPTCRHTFHVECIDEWLAGNSTCPIC 166
>gi|38174276|gb|AAH60884.1| Topoisomerase I binding, arginine/serine-rich [Homo sapiens]
Length = 1045
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|440909243|gb|ELR59172.1| hypothetical protein M91_05364 [Bos grunniens mutus]
Length = 353
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT C+H + C L+ + + C IC QQ +EL+A +L K R
Sbjct: 284 VTKCRHYFCEGCALQHFRTTSRCYICDQQTNGVFNPAKELIA-----KLEKRRAAEEGGA 338
Query: 68 VTFPEDFDNGP 78
FPED D GP
Sbjct: 339 SNFPEDPDKGP 349
>gi|355753279|gb|EHH57325.1| E3 ubiquitin-protein ligase Topors [Macaca fascicularis]
Length = 1140
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 214 CLHKFCFRCVQEWSKNKAECPLCKQPF 240
>gi|355567707|gb|EHH24048.1| E3 ubiquitin-protein ligase Topors [Macaca mulatta]
Length = 1140
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 214 CLHKFCFRCVQEWSKNKAECPLCKQPF 240
>gi|194224907|ref|XP_001498962.2| PREDICTED: e3 ubiquitin-protein ligase Topors [Equus caballus]
Length = 980
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 54 CLHKFCFRCVQEWSKNKAECPLCKQPF 80
>gi|440799807|gb|ELR20850.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 441
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
++ C H + CILEWS + CP+C Q+F
Sbjct: 28 ELNGCSHIFCYSCILEWSNVANSCPLCKQKFT 59
>gi|307344673|ref|NP_001182551.1| E3 ubiquitin-protein ligase Topors isoform 2 [Homo sapiens]
gi|9664148|dbj|BAB03715.1| RING-finger protein [Homo sapiens]
Length = 980
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 54 CLHKFCFRCVQEWSKNKAECPLCKQPF 80
>gi|343958212|dbj|BAK62961.1| hypothetical protein [Pan troglodytes]
Length = 332
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 292 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 320
>gi|297684247|ref|XP_002819762.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Pongo
abelii]
gi|395740389|ref|XP_003777412.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Pongo abelii]
Length = 1045
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|223946175|gb|ACN27171.1| unknown [Zea mays]
Length = 175
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+H+YH++CI EW ++ CPIC
Sbjct: 139 CEHQYHVRCIHEWLKQKNWCPIC 161
>gi|40805104|ref|NP_005793.2| E3 ubiquitin-protein ligase Topors isoform 1 [Homo sapiens]
gi|74752935|sp|Q9NS56.1|TOPRS_HUMAN RecName: Full=E3 ubiquitin-protein ligase Topors; AltName:
Full=SUMO1-protein E3 ligase Topors; AltName:
Full=Topoisomerase I-binding RING finger protein;
AltName: Full=Topoisomerase I-binding
arginine/serine-rich protein; AltName: Full=Tumor
suppressor p53-binding protein 3; Short=p53-binding
protein 3; Short=p53BP3
gi|9664146|dbj|BAB03714.1| RING-finger protein [Homo sapiens]
gi|119578950|gb|EAW58546.1| topoisomerase I binding, arginine/serine-rich [Homo sapiens]
Length = 1045
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|340959594|gb|EGS20775.1| hypothetical protein CTHT_0026120 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 644
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQFVL 39
++ +C H H C+ EWS ++ CPIC Q F +
Sbjct: 69 EILACGHMLHDSCLREWSDKANSCPICRQTFNI 101
>gi|330803467|ref|XP_003289727.1| hypothetical protein DICPUDRAFT_154172 [Dictyostelium purpureum]
gi|325080161|gb|EGC33728.1| hypothetical protein DICPUDRAFT_154172 [Dictyostelium purpureum]
Length = 470
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFV-LKE 41
C H++ CILEWS ++ CP C ++F +KE
Sbjct: 331 CNHKFCFDCILEWSDQANTCPTCRKRFYNIKE 362
>gi|301785796|ref|XP_002928313.1| PREDICTED: e3 ubiquitin-protein ligase Topors-like [Ailuropoda
melanoleuca]
Length = 1043
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|356531052|ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Glycine max]
gi|356531054|ref|XP_003534093.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2
[Glycine max]
Length = 376
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
CKH YH CIL W + CP+C + +P
Sbjct: 222 CKHIYHADCILPWLELHNSCPVCRYELPTDDP 253
>gi|328713565|ref|XP_003245118.1| PREDICTED: TRAF-interacting protein-like [Acyrthosiphon pisum]
Length = 416
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICW 34
T C H +H +C++ W QRS+ CP C
Sbjct: 20 IHTTYCGHVFHYECLMTWIQRSQTCPHCL 48
>gi|388490356|ref|NP_001253070.1| E3 ubiquitin-protein ligase Topors [Macaca mulatta]
gi|380808654|gb|AFE76202.1| E3 ubiquitin-protein ligase Topors isoform 1 [Macaca mulatta]
gi|383415009|gb|AFH30718.1| E3 ubiquitin-protein ligase Topors isoform 1 [Macaca mulatta]
Length = 1045
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|149568981|ref|XP_001517302.1| PREDICTED: RING finger protein 38, partial [Ornithorhynchus
anatinus]
Length = 460
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 420 LLRVLPCSHEFHAKCVDKWLKANRTCPIC 448
>gi|403372055|gb|EJY85916.1| Ring finger protein, putative [Oxytricha trifallax]
Length = 447
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ +C H+YH +CI EW R CPIC
Sbjct: 413 LKTLTCFHKYHKECISEWLHRQNFCPIC 440
>gi|440909106|gb|ELR59052.1| E3 ubiquitin-protein ligase RNF167, partial [Bos grunniens mutus]
Length = 327
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 6 FQVTSCKHEYHLQCILEW-SQRSKECPICWQQFVLKEPACQEL 47
+V C H YH +C+ W +Q K CPIC K+P C+ L
Sbjct: 240 LRVLPCAHAYHCRCVDPWLTQTKKTCPIC------KQPVCRNL 276
>gi|296484928|tpg|DAA27043.1| TPA: topoisomerase I binding, arginine/serine-rich [Bos taurus]
Length = 1100
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 182 CLHKFCFRCVQEWSKNKAECPLCKQPF 208
>gi|410978424|ref|XP_003995591.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Felis
catus]
Length = 977
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 54 CLHKFCFRCVQEWSKNKAECPLCKQPF 80
>gi|359320817|ref|XP_003639434.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Canis
lupus familiaris]
Length = 1043
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|348569863|ref|XP_003470717.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cavia
porcellus]
Length = 1142
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 220 CLHKFCFRCVQEWSKNKAECPLCKQPF 246
>gi|308161200|gb|EFO63656.1| HRT1-like protein [Giardia lamblia P15]
Length = 89
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C HEYH CI +W +K CP+C + + E
Sbjct: 58 CGHEYHTHCIQQWVDSNKTCPLCMADWAVLE 88
>gi|226495451|ref|NP_001149296.1| LOC100282919 [Zea mays]
gi|195626142|gb|ACG34901.1| protein binding protein [Zea mays]
Length = 323
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 289 CKHLYHPECINQWLQINKVCPMC 311
>gi|125554505|gb|EAZ00111.1| hypothetical protein OsI_22117 [Oryza sativa Indica Group]
Length = 819
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQ 36
CKH YH CI+ W + CP+C Q+
Sbjct: 204 CKHAYHSDCIVPWLRLHNSCPVCRQE 229
>gi|426361521|ref|XP_004047956.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Gorilla
gorilla gorilla]
gi|426361523|ref|XP_004047957.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Gorilla
gorilla gorilla]
Length = 1045
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|356531305|ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
Length = 419
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V CKH +H+ CI W ++ CPIC
Sbjct: 135 VPKCKHAFHIDCIDHWLEKHSTCPIC 160
>gi|332228628|ref|XP_003263491.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Nomascus
leucogenys]
Length = 1045
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|296190083|ref|XP_002743044.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Callithrix
jacchus]
Length = 1045
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|296475697|tpg|DAA17812.1| TPA: ring finger protein 167-like [Bos taurus]
Length = 353
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 6 FQVTSCKHEYHLQCILEW-SQRSKECPICWQQFVLKEPACQEL 47
+V C H YH +C+ W +Q K CPIC K+P C+ L
Sbjct: 243 LRVLPCAHAYHCRCVDPWLTQTKKTCPIC------KQPVCRNL 279
>gi|335296433|ref|XP_003357776.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Sus
scrofa]
Length = 981
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 54 CLHKFCFRCVQEWSKNKAECPLCKQPF 80
>gi|440893953|gb|ELR46542.1| E3 ubiquitin-protein ligase Topors, partial [Bos grunniens mutus]
Length = 1037
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|47222931|emb|CAF99087.1| unnamed protein product [Tetraodon nigroviridis]
Length = 687
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HEYH+ CI W + CPIC
Sbjct: 651 CSHEYHVHCIDRWLSENSTCPIC 673
>gi|350397367|ref|XP_003484858.1| PREDICTED: hypothetical protein LOC100746954 [Bombus impatiens]
Length = 690
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C HE+H +CI +W + ++ CPIC
Sbjct: 647 LRVLPCSHEFHSKCIDKWLKSNRTCPIC 674
>gi|426361527|ref|XP_004047959.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 4 [Gorilla
gorilla gorilla]
Length = 978
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 52 CLHKFCFRCVQEWSKNKAECPLCKQPF 78
>gi|297825605|ref|XP_002880685.1| hypothetical protein ARALYDRAFT_901196 [Arabidopsis lyrata subsp.
lyrata]
gi|297326524|gb|EFH56944.1| hypothetical protein ARALYDRAFT_901196 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ ++ +C H +H+ CI EW R CP+C
Sbjct: 168 IIKLPNCSHLFHIVCIFEWLMRCNSCPLC 196
>gi|431902874|gb|ELK09089.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein
ligase [Pteropus alecto]
Length = 1078
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 155 CLHKFCFRCVQEWSKNKAECPLCKQPF 181
>gi|426361525|ref|XP_004047958.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 3 [Gorilla
gorilla gorilla]
Length = 980
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 54 CLHKFCFRCVQEWSKNKAECPLCKQPF 80
>gi|241618045|ref|XP_002408287.1| conserved hypothetical protein [Ixodes scapularis]
gi|215502954|gb|EEC12448.1| conserved hypothetical protein [Ixodes scapularis]
Length = 645
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF---VLKEPACQELLAAIESERLSKSRPIASAA 66
SC H + C+ EW++ ECP+C Q+F + + ++ SE ++R + S
Sbjct: 69 SCFHTFCFGCLAEWAKLKPECPLCKQRFKSIIHSVRSLEDYDQYFLSEEQHRTRSLYST- 127
Query: 67 PVTFPEDFDNGPDGTYFDY 85
+F D GPDG F +
Sbjct: 128 --SFSGD---GPDGRRFRF 141
>gi|363741043|ref|XP_003642427.1| PREDICTED: RING finger protein 43-like [Gallus gallus]
Length = 677
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAA 50
++ SC HE+H +C+ W Q+ CP+C + ++ Q +A
Sbjct: 285 LRIISCSHEFHRECVDPWLQQHHTCPLCMFNILARDSVDQATVAG 329
>gi|397520029|ref|XP_003830150.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Pan
paniscus]
gi|397520031|ref|XP_003830151.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Pan
paniscus]
Length = 1045
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|332831685|ref|XP_001156785.2| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Pan
troglodytes]
gi|410349155|gb|JAA41181.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin
protein ligase [Pan troglodytes]
Length = 980
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 54 CLHKFCFRCVQEWSKNKAECPLCKQPF 80
>gi|291243917|ref|XP_002741845.1| PREDICTED: ring finger protein 181-like [Saccoglossus kowalevskii]
Length = 160
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQE 46
C+H++H CIL W +++ CP+C + + +P +E
Sbjct: 101 CQHQFHSGCILPWLKKTNSCPVCRHELLTDDPDYEE 136
>gi|114624060|ref|XP_001156839.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 3 [Pan
troglodytes]
gi|410042516|ref|XP_003951457.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Pan troglodytes]
gi|410219910|gb|JAA07174.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein
ligase [Pan troglodytes]
gi|410266120|gb|JAA21026.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein
ligase [Pan troglodytes]
gi|410293742|gb|JAA25471.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein
ligase [Pan troglodytes]
gi|410349153|gb|JAA41180.1| topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein
ligase [Pan troglodytes]
Length = 1045
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|403297890|ref|XP_003939779.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Saimiri boliviensis
boliviensis]
Length = 1045
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|334311222|ref|XP_001380922.2| PREDICTED: RING finger protein 44-like [Monodelphis domestica]
Length = 395
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 355 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 383
>gi|294462410|gb|ADE76753.1| unknown [Picea sitchensis]
Length = 354
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
CKH YH CIL W + CPIC Q + P
Sbjct: 190 CKHIYHSDCILPWLAQHNTCPICRQGLPTEVP 221
>gi|145518814|ref|XP_001445279.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412723|emb|CAK77882.1| unnamed protein product [Paramecium tetraurelia]
Length = 462
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPICWQQF 37
T CKH +H C+ +W++++ CP+C Q+
Sbjct: 355 TPCKHYFHTNCLRDWTKKNTTCPVCRQEL 383
>gi|426220551|ref|XP_004004478.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Ovis aries]
Length = 969
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 52 CLHKFCFRCVQEWSKNKAECPLCKQPF 78
>gi|225637515|ref|NP_598825.2| RING finger protein 44 isoform 4 [Mus musculus]
gi|74213634|dbj|BAE35621.1| unnamed protein product [Mus musculus]
gi|74213677|dbj|BAE35639.1| unnamed protein product [Mus musculus]
gi|148709209|gb|EDL41155.1| ring finger protein 44, isoform CRA_a [Mus musculus]
gi|148709210|gb|EDL41156.1| ring finger protein 44, isoform CRA_a [Mus musculus]
gi|148709211|gb|EDL41157.1| ring finger protein 44, isoform CRA_a [Mus musculus]
Length = 350
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 310 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 338
>gi|281341396|gb|EFB16980.1| hypothetical protein PANDA_018228 [Ailuropoda melanoleuca]
Length = 978
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 54 CLHKFCFRCVQEWSKNKAECPLCKQPF 80
>gi|114624062|ref|XP_001156719.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 1 [Pan
troglodytes]
Length = 978
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 52 CLHKFCFRCVQEWSKNKAECPLCKQPF 78
>gi|67078432|ref|NP_001019966.1| RING finger protein 44 [Rattus norvegicus]
gi|81908627|sp|Q4V7B8.1|RNF44_RAT RecName: Full=RING finger protein 44
gi|66911650|gb|AAH98030.1| Ring finger protein 44 [Rattus norvegicus]
gi|149039917|gb|EDL94033.1| ring finger protein 44, isoform CRA_a [Rattus norvegicus]
gi|149039918|gb|EDL94034.1| ring finger protein 44, isoform CRA_a [Rattus norvegicus]
gi|149039919|gb|EDL94035.1| ring finger protein 44, isoform CRA_a [Rattus norvegicus]
Length = 350
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 310 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 338
>gi|344240393|gb|EGV96496.1| RING finger protein 44 [Cricetulus griseus]
Length = 351
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 311 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 339
>gi|27370731|gb|AAH37141.1| Topors protein, partial [Mus musculus]
Length = 887
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 120 CLHKFCFRCVQEWSKNKAECPLCKQPF 146
>gi|449541670|gb|EMD32653.1| hypothetical protein CERSUDRAFT_118680 [Ceriporiopsis subvermispora
B]
Length = 525
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFV 38
C H +H CI+ W + S CP+C Q +
Sbjct: 289 CSHPFHQSCIMPWLKTSGTCPVCRYQLI 316
>gi|357110976|ref|XP_003557291.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 338
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
CKH +H CIL W CP+C + EP
Sbjct: 222 CKHVFHKDCILPWLDLHSSCPVCRHELPTDEP 253
>gi|332228632|ref|XP_003263493.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 3 [Nomascus
leucogenys]
Length = 978
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 52 CLHKFCFRCVQEWSKNKAECPLCKQPF 78
>gi|330790108|ref|XP_003283140.1| hypothetical protein DICPUDRAFT_74110 [Dictyostelium purpureum]
gi|325087007|gb|EGC40389.1| hypothetical protein DICPUDRAFT_74110 [Dictyostelium purpureum]
Length = 488
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ CILEWS ++ CP C ++F
Sbjct: 363 CNHKFCFDCILEWSDQANTCPTCRKRF 389
>gi|154335064|ref|XP_001562177.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060801|emb|CAM37817.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 193
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
+ C+H +HLQC+ W QRS CP+C
Sbjct: 77 LLKCEHGFHLQCLESWRQRSTMCPMC 102
>gi|332228630|ref|XP_003263492.1| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Nomascus
leucogenys]
Length = 980
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 54 CLHKFCFRCVQEWSKNKAECPLCKQPF 80
>gi|297742376|emb|CBI34525.3| unnamed protein product [Vitis vinifera]
Length = 177
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 2 QFCLFQVTSCKHEYHLQCILEWSQRSKECPIC 33
++ L Q+ SCKHE+ CI W + + CPIC
Sbjct: 96 EYTLHQIPSCKHEFPADCIYHWLRTNSTCPIC 127
>gi|449017674|dbj|BAM81076.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 806
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ ++ C H YH C+ W QR K CP+C
Sbjct: 688 IVRILPCCHFYHKDCVDRWLQRHKRCPVC 716
>gi|351713048|gb|EHB15967.1| E3 ubiquitin-protein ligase Topors, partial [Heterocephalus glaber]
Length = 1042
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 119 CLHKFCFRCVQEWSKNKAECPLCKQPF 145
>gi|330790106|ref|XP_003283139.1| hypothetical protein DICPUDRAFT_74109 [Dictyostelium purpureum]
gi|325087006|gb|EGC40388.1| hypothetical protein DICPUDRAFT_74109 [Dictyostelium purpureum]
Length = 460
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ CILEWS ++ CP C ++F
Sbjct: 348 CNHKFCFDCILEWSDQANTCPTCRKRF 374
>gi|307179492|gb|EFN67806.1| RING finger protein 44 [Camponotus floridanus]
Length = 705
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C HE+H +CI +W + ++ CPIC
Sbjct: 662 LRVLPCSHEFHSKCIDKWLKSNRTCPIC 689
>gi|116283605|gb|AAH19421.1| Topors protein [Mus musculus]
Length = 889
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 120 CLHKFCFRCVQEWSKNKAECPLCKQPF 146
>gi|413944047|gb|AFW76696.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 340
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPA 43
CKH YH CI+ W + CP+C Q+ L +PA
Sbjct: 225 CKHAYHTDCIVPWLRLHNSCPVCRQE--LPQPA 255
>gi|345777507|ref|XP_538699.3| PREDICTED: E3 ubiquitin-protein ligase Topors isoform 2 [Canis
lupus familiaris]
Length = 978
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 54 CLHKFCFRCVQEWSKNKAECPLCKQPF 80
>gi|344271720|ref|XP_003407685.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Loxodonta africana]
Length = 1115
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 193 CLHKFCFRCVQEWSKNKAECPLCKQPF 219
>gi|328353726|emb|CCA40124.1| putative membrane protein [Komagataella pastoris CBS 7435]
Length = 787
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
++ VT C+H +H +C+ W Q +CP+C
Sbjct: 752 VYMVTPCRHLFHSECLESWMQYKLQCPVC 780
>gi|242061208|ref|XP_002451893.1| hypothetical protein SORBIDRAFT_04g009330 [Sorghum bicolor]
gi|241931724|gb|EES04869.1| hypothetical protein SORBIDRAFT_04g009330 [Sorghum bicolor]
Length = 225
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPIC 33
Q+ +CKH +H+QCI W + CP+C
Sbjct: 165 QLPACKHLFHVQCIDMWLHSHRTCPVC 191
>gi|193664583|ref|XP_001948867.1| PREDICTED: PAX-interacting protein 1-like [Acyrthosiphon pisum]
Length = 734
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
T C H +H QC+++W RSK CP C
Sbjct: 22 TQCGHVFHHQCLMKWLARSKTCPHC 46
>gi|339505172|ref|YP_004692592.1| flagellar-hook associated protein FlgK [Roseobacter litoralis Och
149]
gi|338759165|gb|AEI95629.1| putative flagellar-hook associated protein FlgK [Roseobacter
litoralis Och 149]
Length = 481
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 162 PPSSDPGTNRDGPFKSRVFFRQSPPDSPRRPNPSEVFSFSESVKSKWSAASARYKESISK 221
P +D R F++ + S PD+P R N V + + + SAAS +++ S
Sbjct: 95 PDQADSLAGRMAEFETTLITAASRPDAPERLNG--VVDAARDIANLISAASDGVQQARSD 152
Query: 222 GTRSLKERLLSRNTS---VKELSKEVQREMSAG 251
RS++ ++ NTS VKEL+ ++ R +S G
Sbjct: 153 ADRSIQVQIDRLNTSLQNVKELNSQITRTISTG 185
>gi|170588425|ref|XP_001898974.1| putative anaphase promoting complex subunit 11 [Brugia malayi]
gi|158593187|gb|EDP31782.1| putative anaphase promoting complex subunit 11 [Brugia malayi]
Length = 380
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSK----ECPICWQQF 37
C + CKH +H+ CI++W++ +CP+C Q++
Sbjct: 338 CPLALGECKHAFHMHCIVKWTETQNAARPQCPLCRQEW 375
>gi|449020105|dbj|BAM83507.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 785
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
VT C H +H +C+L+W + ECP C
Sbjct: 753 VTPCDHAFHSECLLKWMEIKLECPTC 778
>gi|3822225|gb|AAC69857.1| RING-H2 finger protein RHG1a, partial [Arabidopsis thaliana]
Length = 190
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C HE+H QCI EW ++ CPIC
Sbjct: 154 CGHEFHSQCIEEWLKQKNLCPIC 176
>gi|225637513|ref|NP_001139499.1| RING finger protein 44 isoform 3 [Mus musculus]
gi|74179060|dbj|BAE42740.1| unnamed protein product [Mus musculus]
Length = 351
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 311 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 339
>gi|222640697|gb|EEE68829.1| hypothetical protein OsJ_27603 [Oryza sativa Japonica Group]
Length = 449
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
C H YH +CI++W + CP+C + EP
Sbjct: 330 CGHLYHSECIVQWLEMRNSCPVCRSRLPSDEP 361
>gi|145512457|ref|XP_001442145.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409417|emb|CAK74748.1| unnamed protein product [Paramecium tetraurelia]
Length = 251
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH++HL CI EW + CPIC
Sbjct: 218 CKHKFHLGCIQEWFKTKSTCPIC 240
>gi|17160934|gb|AAH17630.1| Ring finger protein 44 [Mus musculus]
gi|23272022|gb|AAH35548.1| Ring finger protein 44 [Mus musculus]
Length = 339
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 299 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 327
>gi|326511086|dbj|BAJ91890.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528675|dbj|BAJ97359.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 248
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C+H +H++CI +W QR+ CP+C
Sbjct: 215 CQHIFHVRCIDDWLQRNSSCPLC 237
>gi|55925492|ref|NP_991116.1| E3 ubiquitin-protein ligase RNF8 isoform 1 [Danio rerio]
gi|41351026|gb|AAH65643.1| Zgc:55936 [Danio rerio]
Length = 531
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFV 38
+C H + CI EW R +CP+CWQ
Sbjct: 406 NCAHSFCQHCISEWRNRKDKCPMCWQNIT 434
>gi|71403076|ref|XP_804378.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70867314|gb|EAN82527.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 103
Score = 38.9 bits (89), Expect = 3.8, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQFV 38
+C H +H CI W ++ +ECP C++++V
Sbjct: 67 TCDHTFHDHCIQSWCRQRRECPACFKEWV 95
>gi|74137241|dbj|BAE22003.1| unnamed protein product [Mus musculus]
Length = 824
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 120 CLHKFCFRCVQEWSKNKAECPLCKQPF 146
>gi|414590063|tpg|DAA40634.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 323
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 289 CKHLYHPECINQWLQINKVCPMC 311
>gi|324512077|gb|ADY45012.1| E3 ubiquitin-protein ligase RNF115 [Ascaris suum]
Length = 238
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQ 35
C H +H +CI+ W QR CPIC Q
Sbjct: 197 CHHVFHRECIVPWLQRHNTCPICRQ 221
>gi|291238745|ref|XP_002739287.1| PREDICTED: vacuolar protein sorting 11-like [Saccoglossus
kowalevskii]
Length = 1133
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 57/168 (33%), Gaps = 32/168 (19%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPVTF 70
C+H YH C +++ ECP C + +++L I ++ SK F
Sbjct: 827 CQHSYHQHCFEGYAESESECPACMSE-------NRKVLDIIRAQEHSKD------LHEQF 873
Query: 71 PEDFDNGPDGTYFDYDDMEARIMQHLAAARYFRRREMQRYPALDASQVVDSSSAATASLM 130
D DG A YF R + L S V A T ++
Sbjct: 874 HHQLDRATDGFS--------------VVADYFGRGVFNKVTLLTDSMPVKKKPAPTRVVI 919
Query: 131 LPTNANSPNFCHGSSDTDIPTSVIRSTDNAQPPSS-----DPGTNRDG 173
PT H S P +R TDN P S +P T+ DG
Sbjct: 920 DPTLQRDQLMGHKQSQPINPFPAVRRTDNVSPFESSRNQTEPLTSLDG 967
>gi|449019554|dbj|BAM82956.1| anaphase promoting complex subunit 11 [Cyanidioschyzon merolae
strain 10D]
Length = 85
Score = 38.5 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 4 CLFQVTSCKHEYHLQCILEW--SQRSK-ECPICWQQFVLKE 41
C + C+H +HL CIL+W S+ S+ CP+C Q++ ++
Sbjct: 44 CPLALGECRHAFHLHCILKWLSSETSRNHCPLCRQEWQFQQ 84
>gi|444313377|ref|XP_004177346.1| hypothetical protein TBLA_0A00260 [Tetrapisispora blattae CBS 6284]
gi|387510385|emb|CCH57827.1| hypothetical protein TBLA_0A00260 [Tetrapisispora blattae CBS 6284]
Length = 184
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 4 CLFQVTSCKHEYHLQCILEWSQRSKE---CPICWQQFVLKE 41
C V +C H +H+ CI +W + CP+C Q+F LKE
Sbjct: 71 CPLVVGNCFHNFHVHCIYKWLDTTTSKGLCPMCRQEFKLKE 111
>gi|255072715|ref|XP_002500032.1| predicted protein [Micromonas sp. RCC299]
gi|226515294|gb|ACO61290.1| predicted protein [Micromonas sp. RCC299]
Length = 398
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H YH CI W +RS ECP+C
Sbjct: 364 CLHSYHAGCIDRWFERSVECPLC 386
>gi|395505165|ref|XP_003756915.1| PREDICTED: RING finger protein 44 isoform 2 [Sarcophilus harrisii]
Length = 350
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 310 LLRVLPCNHEFHAKCVDKWLKANRTCPIC 338
>gi|322780920|gb|EFZ10132.1| hypothetical protein SINV_09125 [Solenopsis invicta]
Length = 611
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C HE+H +CI +W + ++ CPIC
Sbjct: 568 LRVLPCSHEFHSKCIDKWLKSNRTCPIC 595
>gi|380492389|emb|CCF34637.1| hypothetical protein CH063_06589 [Colletotrichum higginsianum]
Length = 556
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V CKH +H QC++ W + CPIC
Sbjct: 331 VLPCKHWFHDQCVVMWLKEHNTCPIC 356
>gi|156848678|ref|XP_001647220.1| hypothetical protein Kpol_1002p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156117905|gb|EDO19362.1| hypothetical protein Kpol_1002p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 754
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
F +T C H +H QC+ W +CP+C
Sbjct: 720 FMITPCNHVFHTQCLENWMGYKLQCPVC 747
>gi|449267834|gb|EMC78730.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 279
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H++ L CIL W+QR +CP+C
Sbjct: 94 CHHQFCLGCILRWTQRKPDCPLC 116
>gi|440295613|gb|ELP88525.1| hypothetical protein EIN_344850 [Entamoeba invadens IP1]
Length = 388
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
VT C H + CI EW +R++ CPIC
Sbjct: 17 VTPCGHTFCYDCIAEWVRRTENCPIC 42
>gi|357143129|ref|XP_003572813.1| PREDICTED: putative RING-H2 finger protein ATL53-like [Brachypodium
distachyon]
Length = 219
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
+C+H +HL CI W Q+ CPIC
Sbjct: 127 TCRHNFHLSCIDMWLQKQTTCPIC 150
>gi|340725904|ref|XP_003401304.1| PREDICTED: hypothetical protein LOC100651818 [Bombus terrestris]
Length = 691
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C HE+H +CI +W + ++ CPIC
Sbjct: 648 LRVLPCSHEFHSKCIDKWLKSNRTCPIC 675
>gi|307210670|gb|EFN87093.1| RING finger protein 44 [Harpegnathos saltator]
Length = 641
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C HE+H +CI +W + ++ CPIC
Sbjct: 598 LRVLPCSHEFHSKCIDKWLKSNRTCPIC 625
>gi|145489113|ref|XP_001430559.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397658|emb|CAK63161.1| unnamed protein product [Paramecium tetraurelia]
Length = 502
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+T C H +H C+ +W Q K CP+C ++F+
Sbjct: 397 LTPCYHLFHQHCLFKWLQTQKCCPLCRKEFI 427
>gi|3928094|gb|AAC79620.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 270
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+T CKH Y L CI +WS + CP+C +F
Sbjct: 55 ITVCKHGYCLACIRKWSSFKRNCPLCNTRF 84
>gi|74148982|dbj|BAE32164.1| unnamed protein product [Mus musculus]
Length = 750
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 120 CLHKFCFRCVQEWSKNKAECPLCKQPF 146
>gi|389743536|gb|EIM84720.1| hypothetical protein STEHIDRAFT_140311 [Stereum hirsutum FP-91666
SS1]
Length = 1153
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
SC HE+ +CI+ W ++S+ CP+C
Sbjct: 64 SCSHEFCFECIVVWCEQSRRCPLC 87
>gi|255641557|gb|ACU21052.1| unknown [Glycine max]
Length = 128
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPICWQQF 37
++ C H + CI+EW++ CPIC Q+F
Sbjct: 42 EIDCCSHHFCFVCIMEWAKHESRCPICRQRF 72
>gi|432110822|gb|ELK34299.1| E3 ubiquitin-protein ligase Topors [Myotis davidii]
Length = 1078
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 155 CLHKFCFRCVQEWSKNKAECPLCKQPF 181
>gi|407039440|gb|EKE39649.1| zinc finger domain containing protein [Entamoeba nuttalli P19]
Length = 319
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQ 35
+ C H +H CIL W+ +SK CP+C Q
Sbjct: 270 ILQCHHVFHKNCILNWNVQSKFCPVCHQ 297
>gi|392343172|ref|XP_003754816.1| PREDICTED: uncharacterized protein LOC317533 [Rattus norvegicus]
gi|392355651|ref|XP_003752096.1| PREDICTED: uncharacterized protein LOC317533 [Rattus norvegicus]
Length = 829
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+V C HEYH +CI W + CPIC +Q +
Sbjct: 788 IRVLPCFHEYHDKCIDRWLSDNSTCPICRKQII 820
>gi|74224529|dbj|BAE25253.1| unnamed protein product [Mus musculus]
Length = 756
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 120 CLHKFCFRCVQEWSKNKAECPLCKQPF 146
>gi|328779969|ref|XP_392089.3| PREDICTED: hypothetical protein LOC408543 isoform 1 [Apis
mellifera]
Length = 692
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C HE+H +CI +W + ++ CPIC
Sbjct: 649 LRVLPCSHEFHSKCIDKWLKSNRTCPIC 676
>gi|310796620|gb|EFQ32081.1| hypothetical protein GLRG_07225 [Glomerella graminicola M1.001]
Length = 563
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V CKH +H QC++ W + CPIC
Sbjct: 329 VLPCKHWFHDQCVVMWLKEHNTCPIC 354
>gi|307206358|gb|EFN84410.1| E3 ubiquitin-protein ligase Topors [Harpegnathos saltator]
Length = 837
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 10 SCKHEYHLQCILEWSQRSKECPICWQQF 37
SC H++ C+++WS+ ECP+C Q F
Sbjct: 58 SCLHQFCFDCLVKWSKIKTECPLCKQTF 85
>gi|440798965|gb|ELR20026.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 221
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+T C+H++ CI +W+++S CP+C Q+F
Sbjct: 163 LTCCEHKFCFGCISQWAEKSNTCPLCKQRF 192
>gi|380024410|ref|XP_003695990.1| PREDICTED: uncharacterized protein LOC100863582 [Apis florea]
Length = 692
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C HE+H +CI +W + ++ CPIC
Sbjct: 649 LRVLPCSHEFHSKCIDKWLKSNRTCPIC 676
>gi|189234186|ref|XP_967614.2| PREDICTED: similar to ring finger protein [Tribolium castaneum]
gi|270002665|gb|EEZ99112.1| hypothetical protein TcasGA2_TC005005 [Tribolium castaneum]
Length = 491
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ +V C HE+H +CI +W + ++ CPIC
Sbjct: 451 VLRVLPCSHEFHAKCIDKWLRSNRTCPIC 479
>gi|170039241|ref|XP_001847450.1| ring finger protein [Culex quinquefasciatus]
gi|167862851|gb|EDS26234.1| ring finger protein [Culex quinquefasciatus]
Length = 539
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
+ +V C HE+H +C+ +W + ++ CPIC
Sbjct: 497 VLRVLPCSHEFHAKCVDKWLRSNRTCPIC 525
>gi|67466016|ref|XP_649166.1| zinc finger domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465532|gb|EAL43776.1| zinc finger domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449708664|gb|EMD48083.1| zinc finger domain containing protein [Entamoeba histolytica KU27]
Length = 319
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQ 35
+ C H +H CIL W+ +SK CP+C Q
Sbjct: 270 ILQCHHVFHKNCILNWNVQSKFCPVCHQ 297
>gi|413946374|gb|AFW79023.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 374
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 10 SCKHEYHLQCILEWSQRSKECPIC 33
SC H YH+ CI +W R CP+C
Sbjct: 344 SCGHSYHVHCIKQWLSRKNACPVC 367
>gi|395855877|ref|XP_003800373.1| PREDICTED: E3 ubiquitin-protein ligase Topors [Otolemur garnettii]
Length = 1114
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 202 CLHKFCFRCVQEWSKNKAECPLCKQPF 228
>gi|355725634|gb|AES08619.1| topoisomerase I binding, arginine/serine-rich [Mustela putorius
furo]
Length = 967
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +C+ EWS+ ECP+C Q F
Sbjct: 44 CLHKFCFRCVQEWSKNKAECPLCKQPF 70
>gi|350414402|ref|XP_003490306.1| PREDICTED: TRAF-interacting protein-like [Bombus impatiens]
Length = 414
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
T C H +HL C+ W +RSK CP C
Sbjct: 21 TRCGHVFHLHCLTSWLERSKSCPQC 45
>gi|209880377|ref|XP_002141628.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209557234|gb|EEA07279.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 522
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPIC 33
V C H +H+ C+L W Q+ CP+C
Sbjct: 241 VDECPHIFHVNCLLPWLQQHNSCPVC 266
>gi|145496838|ref|XP_001434409.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401534|emb|CAK67012.1| unnamed protein product [Paramecium tetraurelia]
Length = 538
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+T C H +H C+ +W Q K CP+C ++F+
Sbjct: 433 LTPCYHLFHQHCLFKWLQTQKCCPLCRKEFI 463
>gi|115476794|ref|NP_001061993.1| Os08g0464400 [Oryza sativa Japonica Group]
gi|42409383|dbj|BAD10697.1| unknown protein [Oryza sativa Japonica Group]
gi|113623962|dbj|BAF23907.1| Os08g0464400 [Oryza sativa Japonica Group]
Length = 211
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
C H YH +CI++W + CP+C + EP
Sbjct: 92 CGHLYHSECIVQWLEMRNSCPVCRSRLPSDEP 123
>gi|440493245|gb|ELQ75741.1| E3 ubiquitin ligase [Trachipleistophora hominis]
Length = 327
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPIC 33
++ CKH +HL C+ W ++ + CPIC
Sbjct: 274 RIIKCKHSFHLVCLKRWVEQQQVCPIC 300
>gi|332017238|gb|EGI58021.1| RING finger protein 38 [Acromyrmex echinatior]
Length = 608
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C HE+H +CI +W + ++ CPIC
Sbjct: 566 LRVLPCSHEFHSKCIDKWLKSNRTCPIC 593
>gi|224116596|ref|XP_002331879.1| predicted protein [Populus trichocarpa]
gi|222874628|gb|EEF11759.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAPVTF 70
C H +H++CI +W CP C + CQ+++ ++ S P+
Sbjct: 154 CHHGFHVKCIDKWLSSHSSCPTCRHCLI---ETCQKIIGCSQASTSGTSLPVQETIVSIL 210
Query: 71 PEDFDNGPDGTYFDY 85
P + P+G DY
Sbjct: 211 PLE----PEGLIRDY 221
>gi|149723990|ref|XP_001503751.1| PREDICTED: RING finger protein 43 [Equus caballus]
Length = 783
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V SC HE+H C+ W Q+ + CP+C
Sbjct: 285 LRVISCLHEFHRACVDPWLQQHRTCPLC 312
>gi|30687775|ref|NP_850310.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|17473924|gb|AAL38373.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|20148385|gb|AAM10083.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330254541|gb|AEC09635.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 296
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQF 37
+T CKH Y L CI +WS + CP+C +F
Sbjct: 55 ITVCKHGYCLACIRKWSSFKRNCPLCNTRF 84
>gi|357159651|ref|XP_003578515.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like
[Brachypodium distachyon]
Length = 337
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH CI +W Q +K CP+C
Sbjct: 303 CKHSYHPDCINQWLQINKVCPMC 325
>gi|222635178|gb|EEE65310.1| hypothetical protein OsJ_20551 [Oryza sativa Japonica Group]
Length = 1054
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQ 36
CKH YH CI+ W + CP+C Q+
Sbjct: 206 CKHAYHSDCIVPWLRLHNSCPVCRQE 231
>gi|47219967|emb|CAG11500.1| unnamed protein product [Tetraodon nigroviridis]
Length = 714
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF 37
C H++ +CI EWS+ ECP+C Q F
Sbjct: 25 CLHKFCFRCIHEWSKNKAECPLCKQPF 51
>gi|303277205|ref|XP_003057896.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460553|gb|EEH57847.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 397
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H YH C+ +W RS ECP+C
Sbjct: 364 CLHAYHKDCVDQWFARSVECPVC 386
>gi|149042355|gb|EDL96062.1| rCG36388 [Rattus norvegicus]
Length = 469
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPICWQQFV 38
+V C HEYH +CI W + CPIC +Q +
Sbjct: 428 IRVLPCFHEYHDKCIDRWLSDNSTCPICRKQII 460
>gi|297829096|ref|XP_002882430.1| hypothetical protein ARALYDRAFT_477858 [Arabidopsis lyrata subsp.
lyrata]
gi|297328270|gb|EFH58689.1| hypothetical protein ARALYDRAFT_477858 [Arabidopsis lyrata subsp.
lyrata]
Length = 869
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF-VLKEPA 43
C H + CI+EWS+ CP+C Q+F + +PA
Sbjct: 419 CSHYFCFTCIMEWSKVESRCPLCKQRFRTISKPA 452
>gi|383851749|ref|XP_003701394.1| PREDICTED: uncharacterized protein LOC100882833 [Megachile
rotundata]
Length = 693
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
+V C HE+H +CI +W + ++ CPIC
Sbjct: 650 LRVLPCSHEFHSKCIDKWLKSNRTCPIC 677
>gi|125561815|gb|EAZ07263.1| hypothetical protein OsI_29509 [Oryza sativa Indica Group]
Length = 211
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKEP 42
C H YH +CI++W + CP+C + EP
Sbjct: 92 CGHLYHSECIVQWLEMRNSCPVCRSRLPSDEP 123
>gi|225450657|ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240780 [Vitis vinifera]
Length = 733
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFV-LKEPA 43
C H + CI+EWS+ CP+C Q+F+ + +PA
Sbjct: 276 CSHYFCFGCIMEWSKVESRCPLCKQRFMTISKPA 309
>gi|224120744|ref|XP_002330941.1| predicted protein [Populus trichocarpa]
gi|222873135|gb|EEF10266.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
T+C H YH CI++W RS CP+C
Sbjct: 180 TTCSHVYHSHCIVKWLLRSASCPMC 204
>gi|410913829|ref|XP_003970391.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 578
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 538 LLRVLPCSHEFHGKCVDKWLRANRTCPIC 566
>gi|242045404|ref|XP_002460573.1| hypothetical protein SORBIDRAFT_02g031050 [Sorghum bicolor]
gi|241923950|gb|EER97094.1| hypothetical protein SORBIDRAFT_02g031050 [Sorghum bicolor]
Length = 324
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH YH +CI +W Q +K CP+C
Sbjct: 290 CKHLYHPECINQWLQINKVCPMC 312
>gi|256089439|ref|XP_002580817.1| synoviolin [Schistosoma mansoni]
gi|360043519|emb|CCD78932.1| putative synoviolin [Schistosoma mansoni]
Length = 731
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 7 QVTSCKHEYHLQCILEWSQRSKECPIC 33
++T C H YH +C+++W + CPIC
Sbjct: 679 KITRCGHLYHSECLIQWMKHKLTCPIC 705
>gi|326523127|dbj|BAJ88604.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 451
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLK---EPACQELLAAIES 53
C H +HL+CI W CP+C + + P C +L +ES
Sbjct: 139 CSHAFHLECIDTWLLSHSTCPLCRRSLLAAGDLSPTCSPVLMVLES 184
>gi|89257539|gb|ABD65029.1| C3HC4 type (RING finger) Zinc finger containing protein [Brassica
oleracea]
Length = 185
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 6 FQVTSCKHEYHLQCILEWSQRSKECPIC 33
F + +C H++H CI W +RSK CP+C
Sbjct: 150 FDMPNCSHQFHDLCISRWLRRSKTCPLC 177
>gi|359473945|ref|XP_003631379.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Vitis vinifera]
Length = 176
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 2 QFCLFQVTSCKHEYHLQCILEWSQRSKECPIC 33
++ L Q+ SCKHE+ CI W + + CPIC
Sbjct: 95 EYTLHQIPSCKHEFPADCIYHWLRTNSTCPIC 126
>gi|311276859|ref|XP_003135386.1| PREDICTED: RING finger protein 113A-like [Sus scrofa]
Length = 344
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
VT C+H + C L+ + + C +C QQ +EL+A +L K R
Sbjct: 275 VTKCRHYFCESCALQHFRTTPRCYVCDQQTNGVFNPAKELIA-----KLEKHRAAEEGGA 329
Query: 68 VTFPEDFDNGP 78
FPED D GP
Sbjct: 330 SDFPEDTDEGP 340
>gi|225432354|ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Vitis vinifera]
Length = 294
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 8 VTSCKHEYHLQCILEWSQRSKECPICWQQFVLKEPACQELLAAIESERLSKSRPIASAAP 67
+T+C H Y +CI WS ++CP+C F + + + ++ K RP+A
Sbjct: 57 ITACLHAYCFRCIRRWSDLKRKCPLCNAHF---DSLFYRISLSSQTFLKEKLRPLAEGGT 113
Query: 68 VTFPEDFDNGPDG-----TYFDYDDMEARIMQHLAAARYFRR 104
V +F G G Y+D + ++R + L R F R
Sbjct: 114 V----NFGGGNAGRRVLRRYWDESNSDSRRTRPLPWRRSFGR 151
>gi|145512301|ref|XP_001442067.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409339|emb|CAK74670.1| unnamed protein product [Paramecium tetraurelia]
Length = 438
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 9 TSCKHEYHLQCILEWSQRSKECPIC 33
T CKH +H +CIL W +K CP C
Sbjct: 397 TKCKHLFHKECILAWIYINKNCPTC 421
>gi|2982466|emb|CAA18230.1| putative protein [Arabidopsis thaliana]
gi|7269492|emb|CAB79495.1| putative protein [Arabidopsis thaliana]
Length = 344
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
CKH++H++CI+ W + CP+C
Sbjct: 247 CKHKFHIRCIVPWLELHSSCPVC 269
>gi|15230025|ref|NP_187218.1| RING/U-box protein [Arabidopsis thaliana]
gi|6714443|gb|AAF26130.1|AC011620_6 unknown protein [Arabidopsis thaliana]
gi|21539513|gb|AAM53309.1| unknown protein [Arabidopsis thaliana]
gi|27311925|gb|AAO00928.1| unknown protein [Arabidopsis thaliana]
gi|332640753|gb|AEE74274.1| RING/U-box protein [Arabidopsis thaliana]
Length = 883
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQF-VLKEPA 43
C H + CI+EWS+ CP+C Q+F + +PA
Sbjct: 432 CSHYFCFTCIMEWSKVESRCPLCKQRFRTISKPA 465
>gi|348514454|ref|XP_003444755.1| PREDICTED: hypothetical protein LOC100696086 [Oreochromis
niloticus]
Length = 1005
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 5 LFQVTSCKHEYHLQCILEWSQRSKECPIC 33
L +V C HE+H +C+ +W + ++ CPIC
Sbjct: 965 LLRVLPCSHEFHGKCVDKWLRANRTCPIC 993
>gi|326516860|dbj|BAJ96422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 451
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLK---EPACQELLAAIES 53
C H +HL+CI W CP+C + + P C +L +ES
Sbjct: 139 CSHAFHLECIDTWLLSHSTCPLCRRSLLAAGDLSPTCSPVLMVLES 184
>gi|145533094|ref|XP_001452297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419985|emb|CAK84900.1| unnamed protein product [Paramecium tetraurelia]
Length = 499
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 11 CKHEYHLQCILEWSQRSKECPIC 33
C H +H C++ W +RSK+CPIC
Sbjct: 471 CSHLFHEICLIGWLKRSKQCPIC 493
>gi|449469653|ref|XP_004152533.1| PREDICTED: uncharacterized protein LOC101217869 [Cucumis sativus]
gi|449520469|ref|XP_004167256.1| PREDICTED: uncharacterized protein LOC101230523 [Cucumis sativus]
Length = 223
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 11 CKHEYHLQCILEWSQRSKECPICWQQFVLKE 41
C H YHL CI +W + S CP+C Q L+E
Sbjct: 192 CLHVYHLNCIHKWLELSNRCPLCRFQMPLEE 222
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.126 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,071,417,477
Number of Sequences: 23463169
Number of extensions: 207220603
Number of successful extensions: 612193
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 619
Number of HSP's that attempted gapping in prelim test: 599829
Number of HSP's gapped (non-prelim): 6710
length of query: 332
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 189
effective length of database: 9,003,962,200
effective search space: 1701748855800
effective search space used: 1701748855800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 77 (34.3 bits)